Query 021505
Match_columns 311
No_of_seqs 395 out of 3061
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 05:07:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i5g_A Tryparedoxin II; electr 99.9 3.4E-25 1.2E-29 179.6 14.6 136 85-229 3-143 (144)
2 3s9f_A Tryparedoxin; thioredox 99.9 5.7E-25 1.9E-29 183.4 10.6 137 84-230 23-164 (165)
3 3ewl_A Uncharacterized conserv 99.9 4.1E-24 1.4E-28 172.5 14.7 117 85-212 3-125 (142)
4 1o8x_A Tryparedoxin, TRYX, TXN 99.9 6.6E-24 2.3E-28 172.5 14.9 136 85-230 4-144 (146)
5 3eur_A Uncharacterized protein 99.9 3.5E-24 1.2E-28 173.4 13.1 120 83-213 5-130 (142)
6 1o73_A Tryparedoxin; electron 99.9 9.6E-24 3.3E-28 170.7 13.9 135 85-229 4-143 (144)
7 3fw2_A Thiol-disulfide oxidore 99.9 2E-23 6.8E-28 170.5 15.6 118 85-213 7-133 (150)
8 4fo5_A Thioredoxin-like protei 99.9 4.5E-24 1.5E-28 172.9 11.6 118 85-213 9-130 (143)
9 2lrn_A Thiol:disulfide interch 99.9 2.4E-23 8.2E-28 170.4 15.2 118 85-213 5-126 (152)
10 2f9s_A Thiol-disulfide oxidore 99.9 2.3E-23 8E-28 170.0 14.9 117 85-212 2-119 (151)
11 3drn_A Peroxiredoxin, bacterio 99.9 3.3E-23 1.1E-27 171.7 15.3 116 85-212 4-126 (161)
12 3hcz_A Possible thiol-disulfid 99.9 8.6E-24 2.9E-28 171.1 11.2 119 84-212 6-127 (148)
13 3gl3_A Putative thiol:disulfid 99.9 5.4E-23 1.8E-27 167.7 15.0 116 85-212 5-121 (152)
14 2lrt_A Uncharacterized protein 99.9 7.1E-23 2.4E-27 168.1 15.3 116 84-212 10-129 (152)
15 3eyt_A Uncharacterized protein 99.9 6E-23 2.1E-27 168.6 13.6 117 85-212 2-133 (158)
16 3lor_A Thiol-disulfide isomera 99.9 1.4E-23 4.7E-28 172.7 9.4 119 83-212 3-136 (160)
17 3u5r_E Uncharacterized protein 99.9 6.1E-23 2.1E-27 178.8 14.0 119 85-214 34-161 (218)
18 4g2e_A Peroxiredoxin; redox pr 99.9 4.6E-24 1.6E-28 176.6 6.4 117 85-213 6-135 (157)
19 3fkf_A Thiol-disulfide oxidore 99.9 7.4E-23 2.5E-27 165.6 13.1 119 84-213 6-131 (148)
20 3gkn_A Bacterioferritin comigr 99.9 5.1E-23 1.7E-27 170.4 10.6 118 84-213 8-141 (163)
21 3or5_A Thiol:disulfide interch 99.9 3.4E-22 1.2E-26 165.0 15.5 117 84-212 9-132 (165)
22 2lja_A Putative thiol-disulfid 99.9 1.1E-22 3.6E-27 165.9 11.8 118 85-212 5-124 (152)
23 3kcm_A Thioredoxin family prot 99.9 2.4E-22 8.1E-27 164.2 13.0 118 84-212 3-122 (154)
24 2l5o_A Putative thioredoxin; s 99.9 4.3E-22 1.5E-26 162.5 13.7 119 83-212 2-122 (153)
25 4gqc_A Thiol peroxidase, perox 99.9 1.1E-23 3.8E-28 175.7 4.3 117 85-213 7-137 (164)
26 3kh7_A Thiol:disulfide interch 99.9 1.9E-22 6.6E-27 169.7 12.0 115 84-212 31-148 (176)
27 1jfu_A Thiol:disulfide interch 99.9 5.6E-22 1.9E-26 167.6 14.1 118 85-212 36-159 (186)
28 3lwa_A Secreted thiol-disulfid 99.9 4.7E-22 1.6E-26 167.7 13.0 117 85-212 33-162 (183)
29 1n8j_A AHPC, alkyl hydroperoxi 99.9 1.1E-21 3.6E-26 166.8 14.3 118 85-213 3-134 (186)
30 3raz_A Thioredoxin-related pro 99.9 5.4E-22 1.8E-26 162.1 11.6 114 87-212 3-121 (151)
31 4evm_A Thioredoxin family prot 99.9 6.2E-22 2.1E-26 157.3 11.4 114 88-212 1-120 (138)
32 2cvb_A Probable thiol-disulfid 99.9 1.3E-21 4.5E-26 165.7 14.0 116 85-212 9-132 (188)
33 3erw_A Sporulation thiol-disul 99.9 1.5E-21 5.2E-26 157.1 12.9 118 83-212 9-130 (145)
34 1zzo_A RV1677; thioredoxin fol 99.9 6.3E-22 2.2E-26 157.4 10.4 114 86-212 2-116 (136)
35 3hdc_A Thioredoxin family prot 99.9 9.9E-22 3.4E-26 161.9 11.6 114 85-212 17-131 (158)
36 2c0d_A Thioredoxin peroxidase 99.9 2E-21 7E-26 169.7 14.3 119 84-213 26-162 (221)
37 3ixr_A Bacterioferritin comigr 99.9 2.8E-22 9.7E-27 169.3 8.5 116 86-213 28-157 (179)
38 2b5x_A YKUV protein, TRXY; thi 99.9 6.6E-22 2.3E-26 159.8 10.2 116 85-212 3-126 (148)
39 2ggt_A SCO1 protein homolog, m 99.9 2.6E-21 8.9E-26 159.6 13.9 119 88-213 2-143 (164)
40 1uul_A Tryparedoxin peroxidase 99.9 3.9E-21 1.3E-25 165.2 15.4 119 84-213 7-143 (202)
41 2h01_A 2-Cys peroxiredoxin; th 99.9 2.1E-21 7.2E-26 165.4 13.1 118 85-213 2-137 (192)
42 1qmv_A Human thioredoxin perox 99.9 5.9E-21 2E-25 163.4 15.8 117 85-212 7-140 (197)
43 2i81_A 2-Cys peroxiredoxin; st 99.9 3.2E-21 1.1E-25 167.5 14.1 119 84-213 22-158 (213)
44 3ha9_A Uncharacterized thiored 99.9 1.2E-21 4.2E-26 162.2 10.8 116 83-211 11-145 (165)
45 3ztl_A Thioredoxin peroxidase; 99.9 5.3E-21 1.8E-25 167.1 15.3 120 83-213 40-176 (222)
46 3ia1_A THIO-disulfide isomeras 99.9 4.3E-21 1.5E-25 156.8 13.9 113 85-212 7-125 (154)
47 1xzo_A BSSCO, hypothetical pro 99.9 3.3E-21 1.1E-25 160.6 13.4 119 85-212 9-151 (174)
48 2lus_A Thioredoxion; CR-Trp16, 99.8 2.1E-23 7.3E-28 168.2 0.0 123 88-218 3-130 (143)
49 2pn8_A Peroxiredoxin-4; thiore 99.9 6.2E-21 2.1E-25 165.4 15.2 119 84-213 20-155 (211)
50 1xvw_A Hypothetical protein RV 99.9 2.2E-21 7.4E-26 159.9 11.7 118 84-213 10-138 (160)
51 2bmx_A Alkyl hydroperoxidase C 99.9 3.7E-21 1.3E-25 164.4 13.5 117 85-212 6-147 (195)
52 2v1m_A Glutathione peroxidase; 99.9 2E-21 6.8E-26 161.1 11.3 117 85-212 7-148 (169)
53 1we0_A Alkyl hydroperoxide red 99.9 4.9E-21 1.7E-25 162.4 13.9 119 85-213 3-135 (187)
54 2p5q_A Glutathione peroxidase 99.9 2.1E-21 7.1E-26 161.1 11.2 118 84-212 7-149 (170)
55 2rli_A SCO2 protein homolog, m 99.9 1.2E-20 4.2E-25 156.8 15.9 118 88-212 4-145 (171)
56 3kij_A Probable glutathione pe 99.9 2.6E-21 9E-26 163.1 11.8 141 82-240 11-172 (180)
57 1zof_A Alkyl hydroperoxide-red 99.9 6.8E-21 2.3E-25 163.0 14.5 119 85-213 3-139 (198)
58 1lu4_A Soluble secreted antige 99.9 1.4E-21 4.9E-26 155.7 9.3 111 88-212 3-114 (136)
59 2ywi_A Hypothetical conserved 99.9 5.6E-21 1.9E-25 162.6 13.3 118 85-213 20-147 (196)
60 1psq_A Probable thiol peroxida 99.8 4.7E-21 1.6E-25 159.0 12.2 116 85-213 18-142 (163)
61 3dwv_A Glutathione peroxidase- 99.8 4.8E-22 1.6E-26 168.9 6.0 118 85-212 22-164 (187)
62 2a4v_A Peroxiredoxin DOT5; yea 99.8 1.1E-21 3.9E-26 161.9 8.1 115 85-213 9-133 (159)
63 3cmi_A Peroxiredoxin HYR1; thi 99.8 1.6E-21 5.4E-26 163.0 9.0 115 86-212 9-149 (171)
64 2f8a_A Glutathione peroxidase 99.8 1.5E-20 5E-25 162.8 15.3 118 85-213 22-189 (208)
65 2jsy_A Probable thiol peroxida 99.8 3E-21 1E-25 160.4 10.5 116 85-213 20-144 (167)
66 1kng_A Thiol:disulfide interch 99.8 1.8E-21 6.1E-26 159.1 9.0 116 83-212 8-133 (156)
67 2hyx_A Protein DIPZ; thioredox 99.8 3E-21 1E-25 179.5 11.4 118 84-212 52-180 (352)
68 3qpm_A Peroxiredoxin; oxidored 99.8 1.9E-20 6.5E-25 165.6 16.0 119 84-213 49-184 (240)
69 1zye_A Thioredoxin-dependent p 99.8 1.4E-20 4.6E-25 164.3 14.7 118 84-212 28-162 (220)
70 2b1k_A Thiol:disulfide interch 99.8 3.9E-21 1.3E-25 159.6 10.8 114 84-212 23-141 (168)
71 3me7_A Putative uncharacterize 99.8 1.8E-20 6.1E-25 156.9 14.5 120 85-212 3-142 (170)
72 2ls5_A Uncharacterized protein 99.7 7.6E-23 2.6E-27 168.5 0.0 117 85-212 9-130 (159)
73 3p7x_A Probable thiol peroxida 99.8 4.1E-21 1.4E-25 159.8 10.4 115 85-213 22-145 (166)
74 1tp9_A Peroxiredoxin, PRX D (t 99.8 3.8E-21 1.3E-25 159.6 9.8 117 85-213 6-143 (162)
75 2b7k_A SCO1 protein; metalloch 99.8 2.8E-20 9.7E-25 159.7 15.5 125 82-213 12-161 (200)
76 2gs3_A PHGPX, GPX-4, phospholi 99.8 7E-21 2.4E-25 161.3 11.2 118 85-213 25-168 (185)
77 2p31_A CL683, glutathione pero 99.8 1.3E-21 4.5E-26 165.2 6.5 118 84-212 24-162 (181)
78 2h30_A Thioredoxin, peptide me 99.8 7.2E-21 2.5E-25 156.9 10.6 110 93-212 22-137 (164)
79 1q98_A Thiol peroxidase, TPX; 99.8 6.3E-21 2.1E-25 158.7 10.1 116 85-213 19-146 (165)
80 3zrd_A Thiol peroxidase; oxido 99.8 8.4E-21 2.9E-25 163.3 11.0 116 85-213 54-181 (200)
81 2vup_A Glutathione peroxidase- 99.8 3.5E-21 1.2E-25 163.8 8.5 117 85-212 24-166 (190)
82 2yzh_A Probable thiol peroxida 99.8 1.8E-20 6.2E-25 156.6 11.7 115 85-213 23-149 (171)
83 4hde_A SCO1/SENC family lipopr 99.8 9.3E-20 3.2E-24 152.7 15.5 121 84-212 7-149 (170)
84 2obi_A PHGPX, GPX-4, phospholi 99.8 6.5E-21 2.2E-25 161.0 8.4 118 84-212 22-165 (183)
85 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 3E-20 1E-24 155.3 12.0 117 85-213 5-139 (167)
86 3tjj_A Peroxiredoxin-4; thiore 99.8 4.1E-20 1.4E-24 164.7 13.0 119 84-213 63-198 (254)
87 1xvq_A Thiol peroxidase; thior 99.8 2.2E-20 7.6E-25 156.9 10.6 115 85-213 20-145 (175)
88 3uma_A Hypothetical peroxiredo 99.8 1.3E-20 4.4E-25 160.1 8.6 118 84-213 27-164 (184)
89 2i3y_A Epididymal secretory gl 99.8 3.9E-20 1.3E-24 160.9 11.5 117 85-213 31-193 (215)
90 1nm3_A Protein HI0572; hybrid, 99.8 5.2E-20 1.8E-24 162.4 12.0 118 85-213 5-140 (241)
91 3mng_A Peroxiredoxin-5, mitoch 99.8 4.3E-20 1.5E-24 155.3 10.9 119 83-213 15-153 (173)
92 2r37_A Glutathione peroxidase 99.8 1.7E-19 5.9E-24 155.9 14.7 117 85-213 13-175 (207)
93 2pwj_A Mitochondrial peroxired 99.8 2.1E-20 7.3E-25 156.8 8.5 119 83-213 7-151 (171)
94 2v2g_A Peroxiredoxin 6; oxidor 99.8 3.7E-19 1.2E-23 156.6 14.0 118 84-213 4-143 (233)
95 2k6v_A Putative cytochrome C o 99.8 4.9E-20 1.7E-24 153.1 7.3 119 84-213 11-153 (172)
96 3keb_A Probable thiol peroxida 99.8 2.1E-19 7.2E-24 156.5 10.9 137 85-242 24-177 (224)
97 3sbc_A Peroxiredoxin TSA1; alp 99.8 1.4E-19 4.7E-24 156.6 9.6 120 83-212 23-158 (216)
98 1prx_A HORF6; peroxiredoxin, h 99.8 1E-18 3.4E-23 152.9 14.3 119 84-213 6-147 (224)
99 3a2v_A Probable peroxiredoxin; 99.8 9.7E-19 3.3E-23 155.1 12.6 119 84-213 6-140 (249)
100 1xcc_A 1-Cys peroxiredoxin; un 99.8 7E-19 2.4E-23 153.5 11.4 119 84-213 4-144 (220)
101 3tue_A Tryparedoxin peroxidase 99.8 1.1E-18 3.9E-23 151.2 9.1 119 84-212 27-162 (219)
102 4eo3_A Bacterioferritin comigr 99.7 6.1E-17 2.1E-21 149.0 13.5 110 87-212 2-117 (322)
103 3zzx_A Thioredoxin; oxidoreduc 99.7 4.5E-16 1.5E-20 119.9 10.5 72 106-212 17-88 (105)
104 2l57_A Uncharacterized protein 99.7 4.9E-16 1.7E-20 122.6 11.0 92 89-212 6-98 (126)
105 2fwh_A Thiol:disulfide interch 99.7 6.1E-17 2.1E-21 129.8 5.2 95 85-210 6-105 (134)
106 3idv_A Protein disulfide-isome 99.6 1.8E-15 6.3E-20 132.2 13.4 145 10-212 74-219 (241)
107 3ul3_B Thioredoxin, thioredoxi 99.6 2.1E-15 7.3E-20 119.6 12.0 90 87-212 22-111 (128)
108 3hxs_A Thioredoxin, TRXP; elec 99.6 2E-15 6.8E-20 121.4 11.5 84 95-212 38-121 (141)
109 2ju5_A Thioredoxin disulfide i 99.6 9.6E-16 3.3E-20 125.9 9.2 102 86-212 27-132 (154)
110 1v5n_A PDI-like hypothetical p 99.6 1.9E-16 6.6E-21 117.7 4.3 80 222-305 1-81 (89)
111 4f82_A Thioredoxin reductase; 99.6 7.3E-16 2.5E-20 129.3 8.3 118 85-213 12-155 (176)
112 3idv_A Protein disulfide-isome 99.6 8E-16 2.7E-20 134.5 8.5 86 95-212 19-104 (241)
113 3fk8_A Disulphide isomerase; A 99.6 6.2E-15 2.1E-19 117.4 9.4 77 107-213 27-108 (133)
114 3p2a_A Thioredoxin 2, putative 99.6 1.5E-14 5.2E-19 117.4 11.7 92 86-212 32-124 (148)
115 3f3q_A Thioredoxin-1; His TAG, 99.6 1.7E-14 5.7E-19 111.2 10.6 71 107-212 22-92 (109)
116 3f9u_A Putative exported cytoc 99.6 1.7E-15 5.8E-20 126.2 4.9 102 101-212 39-146 (172)
117 2xhf_A Peroxiredoxin 5; oxidor 99.6 8.2E-15 2.8E-19 122.5 8.8 117 84-213 15-149 (171)
118 3d22_A TRXH4, thioredoxin H-ty 99.6 9.6E-15 3.3E-19 117.2 8.7 95 105-249 42-136 (139)
119 2kuc_A Putative disulphide-iso 99.6 1.5E-14 5E-19 114.5 9.6 81 101-212 19-102 (130)
120 2av4_A Thioredoxin-like protei 99.5 3.1E-14 1.1E-18 116.3 10.9 70 108-211 40-109 (160)
121 3qfa_C Thioredoxin; protein-pr 99.5 1.5E-14 5.3E-19 112.7 8.8 71 107-212 29-99 (116)
122 2voc_A Thioredoxin; electron t 99.5 6.1E-14 2.1E-18 108.4 11.3 71 108-212 16-86 (112)
123 1z6n_A Hypothetical protein PA 99.5 8.2E-15 2.8E-19 122.2 6.6 78 103-214 48-128 (167)
124 2l5l_A Thioredoxin; structural 99.5 7E-14 2.4E-18 112.0 11.7 71 108-211 37-107 (136)
125 1a8l_A Protein disulfide oxido 99.5 8.9E-14 3.1E-18 120.5 12.8 75 108-212 133-207 (226)
126 3tco_A Thioredoxin (TRXA-1); d 99.5 1.8E-14 6E-19 109.9 7.3 83 95-212 8-90 (109)
127 3d6i_A Monothiol glutaredoxin- 99.5 4.6E-14 1.6E-18 108.7 9.5 72 108-212 20-91 (112)
128 2pu9_C TRX-F, thioredoxin F-ty 99.5 6.5E-14 2.2E-18 107.8 10.2 74 105-212 20-93 (111)
129 1xiy_A Peroxiredoxin, pfaop; a 99.5 4.6E-14 1.6E-18 119.2 10.0 117 85-213 3-151 (182)
130 2ywm_A Glutaredoxin-like prote 99.5 1.3E-14 4.5E-19 126.3 6.7 65 108-209 135-199 (229)
131 2hls_A Protein disulfide oxido 99.5 1.2E-13 4.1E-18 122.0 12.8 75 106-212 135-209 (243)
132 2qsi_A Putative hydrogenase ex 99.5 2.8E-14 9.4E-19 114.5 7.7 69 110-212 34-104 (137)
133 1gh2_A Thioredoxin-like protei 99.5 1.2E-13 3.9E-18 105.6 10.6 70 108-212 20-89 (107)
134 1xfl_A Thioredoxin H1; AT3G510 99.5 1.2E-13 4.2E-18 109.0 10.9 71 107-212 36-106 (124)
135 4euy_A Uncharacterized protein 99.5 1.9E-14 6.6E-19 109.8 6.0 70 108-212 17-86 (105)
136 2trx_A Thioredoxin; electron t 99.5 6.5E-14 2.2E-18 106.9 9.0 71 108-212 19-89 (108)
137 3hz4_A Thioredoxin; NYSGXRC, P 99.5 8.2E-14 2.8E-18 112.2 10.0 71 108-212 23-93 (140)
138 3gix_A Thioredoxin-like protei 99.5 3.5E-14 1.2E-18 116.0 7.8 70 108-211 22-91 (149)
139 1qgv_A Spliceosomal protein U5 99.5 1.5E-13 5E-18 111.4 11.0 71 108-212 22-92 (142)
140 3die_A Thioredoxin, TRX; elect 99.5 6.7E-14 2.3E-18 106.2 8.2 71 108-212 18-88 (106)
141 1t00_A Thioredoxin, TRX; redox 99.5 7.2E-14 2.5E-18 107.5 8.5 71 108-212 22-92 (112)
142 3ph9_A Anterior gradient prote 99.5 1.9E-14 6.4E-19 118.0 5.0 106 106-248 41-148 (151)
143 1dby_A Chloroplast thioredoxin 99.5 1E-13 3.5E-18 105.6 8.8 71 108-212 18-88 (107)
144 2wz9_A Glutaredoxin-3; protein 99.5 1.9E-13 6.4E-18 111.8 11.0 70 108-212 31-100 (153)
145 1nsw_A Thioredoxin, TRX; therm 99.5 2.3E-13 8E-18 103.2 10.7 71 108-212 16-86 (105)
146 1w4v_A Thioredoxin, mitochondr 99.5 9.8E-14 3.4E-18 108.4 8.8 71 108-212 30-100 (119)
147 3m9j_A Thioredoxin; oxidoreduc 99.5 1.6E-13 5.6E-18 104.0 9.8 71 107-212 18-88 (105)
148 2f51_A Thioredoxin; electron t 99.5 1.3E-13 4.4E-18 107.8 9.4 71 108-212 22-95 (118)
149 3cxg_A Putative thioredoxin; m 99.5 7.4E-14 2.5E-18 111.7 8.0 74 104-212 35-111 (133)
150 3gnj_A Thioredoxin domain prot 99.5 1.4E-13 4.6E-18 105.5 9.2 71 108-212 21-91 (111)
151 2qgv_A Hydrogenase-1 operon pr 99.5 4.4E-14 1.5E-18 113.7 6.6 72 108-212 33-106 (140)
152 2dj1_A Protein disulfide-isome 99.5 2E-13 6.9E-18 109.3 10.4 84 95-210 21-104 (140)
153 2lst_A Thioredoxin; structural 99.2 3.5E-15 1.2E-19 118.3 0.0 83 98-212 9-97 (130)
154 2dml_A Protein disulfide-isome 99.5 1.9E-13 6.4E-18 108.1 10.1 72 108-212 34-105 (130)
155 1thx_A Thioredoxin, thioredoxi 99.5 1.4E-13 4.8E-18 106.0 8.9 71 108-212 24-94 (115)
156 2o8v_B Thioredoxin 1; disulfid 99.5 6.6E-14 2.2E-18 111.2 7.2 71 108-212 39-109 (128)
157 1sen_A Thioredoxin-like protei 99.5 9.5E-15 3.2E-19 121.3 2.3 80 101-212 38-119 (164)
158 1r26_A Thioredoxin; redox-acti 99.5 2.5E-13 8.6E-18 107.5 10.5 71 107-212 35-105 (125)
159 2ppt_A Thioredoxin-2; thiredox 99.5 1.1E-13 3.8E-18 113.7 8.7 71 108-212 63-133 (155)
160 1x5d_A Protein disulfide-isome 99.5 2.2E-13 7.6E-18 107.9 10.1 75 108-212 24-98 (133)
161 1ep7_A Thioredoxin CH1, H-type 99.5 2.9E-13 1E-17 103.9 10.2 70 109-212 24-93 (112)
162 2i4a_A Thioredoxin; acidophIle 99.5 2.1E-13 7.3E-18 103.6 9.0 71 108-212 19-89 (107)
163 2oe3_A Thioredoxin-3; electron 99.5 3.3E-13 1.1E-17 104.9 10.1 70 108-212 29-98 (114)
164 1faa_A Thioredoxin F; electron 99.5 2.5E-13 8.4E-18 106.6 9.3 73 106-212 34-106 (124)
165 2vlu_A Thioredoxin, thioredoxi 99.4 4.7E-13 1.6E-17 104.6 10.7 70 108-212 33-102 (122)
166 1x5e_A Thioredoxin domain cont 99.4 3.4E-13 1.2E-17 106.1 9.8 80 95-210 11-90 (126)
167 3h79_A Thioredoxin-like protei 99.4 4.5E-13 1.5E-17 105.8 10.4 86 95-209 19-105 (127)
168 3uvt_A Thioredoxin domain-cont 99.4 5E-13 1.7E-17 102.2 10.1 73 109-212 21-93 (111)
169 2dj0_A Thioredoxin-related tra 99.4 1.3E-13 4.5E-18 110.4 6.9 75 106-213 23-103 (137)
170 1xwb_A Thioredoxin; dimerizati 99.4 9E-13 3.1E-17 99.9 11.3 72 107-212 18-89 (106)
171 2vim_A Thioredoxin, TRX; thior 99.4 6.7E-13 2.3E-17 100.3 10.3 71 107-212 17-87 (104)
172 2xc2_A Thioredoxinn; oxidoredu 99.4 3.2E-13 1.1E-17 104.9 8.7 72 105-212 29-100 (117)
173 1fb6_A Thioredoxin M; electron 99.4 3.9E-13 1.3E-17 101.7 8.8 71 108-212 17-87 (105)
174 1ti3_A Thioredoxin H, PTTRXH1; 99.4 6.3E-13 2.1E-17 102.1 9.8 71 107-212 24-94 (113)
175 2dj3_A Protein disulfide-isome 99.4 1.6E-13 5.5E-18 108.9 6.7 83 95-209 11-94 (133)
176 2e0q_A Thioredoxin; electron t 99.4 4.4E-13 1.5E-17 100.9 8.8 70 108-212 15-84 (104)
177 3ira_A Conserved protein; meth 99.4 2E-13 6.7E-18 114.3 7.4 88 101-213 31-121 (173)
178 2j23_A Thioredoxin; immune pro 99.4 4E-13 1.4E-17 105.3 8.7 72 108-212 32-103 (121)
179 2vm1_A Thioredoxin, thioredoxi 99.4 8.5E-13 2.9E-17 102.1 10.5 70 108-212 27-96 (118)
180 2yzu_A Thioredoxin; redox prot 99.4 2.8E-13 9.6E-18 103.0 7.5 71 108-212 17-87 (109)
181 3aps_A DNAJ homolog subfamily 99.4 3.6E-13 1.2E-17 105.2 8.2 69 108-209 20-88 (122)
182 1syr_A Thioredoxin; SGPP, stru 99.4 8E-13 2.7E-17 101.9 9.7 70 108-212 25-94 (112)
183 3apq_A DNAJ homolog subfamily 99.4 3.3E-13 1.1E-17 116.2 8.2 83 95-212 101-183 (210)
184 3qou_A Protein YBBN; thioredox 99.4 4.1E-13 1.4E-17 120.7 8.4 72 107-212 24-95 (287)
185 1zma_A Bacterocin transport ac 99.4 1E-12 3.5E-17 102.3 9.4 75 108-212 28-102 (118)
186 2l6c_A Thioredoxin; oxidoreduc 99.4 7.6E-13 2.6E-17 101.9 8.4 70 108-212 18-87 (110)
187 3apo_A DNAJ homolog subfamily 99.4 3E-13 1E-17 138.0 7.7 78 95-209 444-521 (780)
188 2i1u_A Thioredoxin, TRX, MPT46 99.4 3E-12 1E-16 99.6 11.5 71 108-212 29-99 (121)
189 3emx_A Thioredoxin; structural 99.4 4.4E-13 1.5E-17 107.3 6.7 75 111-212 33-107 (135)
190 1v98_A Thioredoxin; oxidoreduc 99.4 1.4E-12 4.8E-17 104.7 9.4 82 96-212 38-119 (140)
191 3evi_A Phosducin-like protein 99.4 8.9E-13 3E-17 103.5 7.4 66 109-212 23-88 (118)
192 3q6o_A Sulfhydryl oxidase 1; p 99.4 3.4E-12 1.2E-16 112.3 11.9 71 108-206 29-99 (244)
193 3dxb_A Thioredoxin N-terminall 99.4 2.1E-12 7.1E-17 112.2 9.9 83 95-212 16-99 (222)
194 3apo_A DNAJ homolog subfamily 99.3 1.1E-12 3.8E-17 133.9 8.7 138 10-212 602-744 (780)
195 2dbc_A PDCL2, unnamed protein 99.3 2.5E-12 8.5E-17 103.0 9.0 67 108-212 29-95 (135)
196 2djj_A PDI, protein disulfide- 99.3 8.7E-13 3E-17 102.8 5.5 83 95-209 11-94 (121)
197 1oaz_A Thioredoxin 1; immune s 99.3 1.3E-12 4.4E-17 103.0 6.4 71 108-212 20-104 (123)
198 3uem_A Protein disulfide-isome 99.3 2.1E-12 7.2E-17 119.9 8.2 72 108-212 266-338 (361)
199 1mek_A Protein disulfide isome 99.3 1.4E-12 4.7E-17 100.9 4.7 72 108-210 23-94 (120)
200 3t58_A Sulfhydryl oxidase 1; o 99.3 9.4E-12 3.2E-16 121.3 10.5 77 108-212 29-108 (519)
201 1wou_A Thioredoxin -related pr 99.3 4.5E-12 1.5E-16 99.7 6.6 78 107-210 22-106 (123)
202 3dml_A Putative uncharacterize 99.3 7.8E-13 2.7E-17 103.2 2.1 75 108-212 17-91 (116)
203 2es7_A Q8ZP25_salty, putative 99.3 4.1E-12 1.4E-16 102.9 6.1 69 109-212 34-106 (142)
204 1fo5_A Thioredoxin; disulfide 99.3 4.2E-12 1.5E-16 92.3 5.2 64 110-209 3-66 (85)
205 2yj7_A LPBCA thioredoxin; oxid 98.9 4.8E-13 1.6E-17 101.1 0.0 71 108-212 18-88 (106)
206 1nho_A Probable thioredoxin; b 99.3 2.1E-12 7.3E-17 94.0 3.5 63 111-209 3-65 (85)
207 3f8u_A Protein disulfide-isome 99.2 8.3E-12 2.8E-16 120.3 7.7 69 108-208 369-437 (481)
208 1wmj_A Thioredoxin H-type; str 99.2 8.9E-13 3E-17 103.9 0.5 71 107-212 34-104 (130)
209 1a0r_P Phosducin, MEKA, PP33; 99.2 9.8E-12 3.3E-16 109.7 6.6 69 108-212 132-200 (245)
210 3iv4_A Putative oxidoreductase 99.2 3.1E-11 1.1E-15 93.1 8.5 73 109-213 24-97 (112)
211 3kp8_A Vkorc1/thioredoxin doma 99.2 4.1E-13 1.4E-17 103.4 -2.7 73 101-209 4-76 (106)
212 3ed3_A Protein disulfide-isome 99.2 3.1E-11 1.1E-15 109.6 9.3 69 108-208 34-102 (298)
213 1a8l_A Protein disulfide oxido 99.2 8.2E-12 2.8E-16 108.1 3.9 69 107-208 20-89 (226)
214 2ywm_A Glutaredoxin-like prote 99.2 3.1E-11 1.1E-15 104.8 7.1 69 109-209 21-93 (229)
215 3ga4_A Dolichyl-diphosphooligo 99.2 2.2E-10 7.7E-15 95.9 12.0 90 89-207 16-114 (178)
216 2trc_P Phosducin, MEKA, PP33; 99.2 1.9E-11 6.4E-16 106.1 5.2 69 108-212 119-187 (217)
217 3uem_A Protein disulfide-isome 99.1 1.8E-10 6.1E-15 106.8 10.8 68 109-207 135-204 (361)
218 1ilo_A Conserved hypothetical 99.1 1.1E-10 3.7E-15 83.4 7.2 62 112-212 2-63 (77)
219 2r2j_A Thioredoxin domain-cont 99.1 2E-10 6.7E-15 107.7 10.9 89 95-212 9-97 (382)
220 2b5e_A Protein disulfide-isome 99.1 2.8E-10 9.7E-15 110.3 10.0 69 108-209 375-443 (504)
221 3qcp_A QSOX from trypanosoma b 99.1 1.2E-10 4E-15 111.5 6.7 76 108-208 41-116 (470)
222 2dlx_A UBX domain-containing p 99.0 1E-09 3.4E-14 89.9 10.1 74 108-212 41-118 (153)
223 3f8u_A Protein disulfide-isome 99.0 7.9E-10 2.7E-14 106.4 11.0 71 108-212 20-90 (481)
224 1sji_A Calsequestrin 2, calseq 99.0 5.4E-10 1.9E-14 103.4 8.6 71 108-212 27-104 (350)
225 2b5e_A Protein disulfide-isome 99.0 1.7E-09 5.9E-14 104.8 12.4 68 108-208 30-97 (504)
226 3us3_A Calsequestrin-1; calciu 98.9 8.7E-09 3E-13 96.1 11.9 72 108-212 29-106 (367)
227 2fgx_A Putative thioredoxin; N 98.8 7.4E-09 2.5E-13 79.4 7.8 64 111-211 30-93 (107)
228 2hls_A Protein disulfide oxido 98.8 4.6E-09 1.6E-13 92.4 7.2 65 110-204 26-94 (243)
229 3gyk_A 27KDA outer membrane pr 98.8 1.7E-08 5.9E-13 83.6 10.1 48 101-159 14-61 (175)
230 2k8s_A Thioredoxin; dimer, str 98.8 6.1E-09 2.1E-13 75.2 5.9 65 113-212 4-68 (80)
231 1eej_A Thiol:disulfide interch 98.8 7.9E-08 2.7E-12 82.9 13.2 93 102-209 79-192 (216)
232 3hd5_A Thiol:disulfide interch 98.7 7.7E-08 2.6E-12 81.2 11.5 44 107-160 23-66 (195)
233 2djk_A PDI, protein disulfide- 98.7 2.2E-08 7.4E-13 79.6 7.1 67 109-209 23-92 (133)
234 1ttz_A Conserved hypothetical 98.7 2.2E-08 7.6E-13 73.9 6.7 58 113-211 3-60 (87)
235 2e7p_A Glutaredoxin; thioredox 98.7 6.7E-09 2.3E-13 80.1 3.7 68 109-212 19-86 (116)
236 3h93_A Thiol:disulfide interch 98.7 5.2E-08 1.8E-12 82.0 9.4 43 108-160 24-66 (192)
237 2c0g_A ERP29 homolog, windbeut 98.7 2.6E-07 9E-12 81.4 12.8 68 108-208 32-105 (248)
238 2znm_A Thiol:disulfide interch 98.6 1.1E-07 3.8E-12 80.1 8.9 43 108-160 21-63 (195)
239 1wjk_A C330018D20RIK protein; 98.6 1.5E-07 5.1E-12 71.1 7.5 63 109-210 15-77 (100)
240 1ego_A Glutaredoxin; electron 98.5 1.7E-07 5.9E-12 67.8 6.5 66 113-211 3-70 (85)
241 2qc7_A ERP31, ERP28, endoplasm 98.5 2.7E-07 9.1E-12 81.0 8.6 67 108-208 21-94 (240)
242 1hyu_A AHPF, alkyl hydroperoxi 98.4 4.7E-07 1.6E-11 88.2 8.8 68 108-212 116-183 (521)
243 1v58_A Thiol:disulfide interch 98.4 1.9E-06 6.4E-11 75.5 11.2 96 102-209 90-212 (241)
244 2rem_A Disulfide oxidoreductas 98.4 1.7E-06 5.7E-11 72.5 10.3 42 108-159 24-65 (193)
245 1un2_A DSBA, thiol-disulfide i 98.4 3.5E-07 1.2E-11 77.8 6.0 45 107-161 111-158 (197)
246 3kp9_A Vkorc1/thioredoxin doma 98.4 1.1E-07 3.9E-12 85.5 2.9 73 101-209 189-261 (291)
247 1t3b_A Thiol:disulfide interch 98.4 9.9E-07 3.4E-11 75.7 8.1 86 108-208 85-191 (211)
248 1z6m_A Conserved hypothetical 98.3 9E-06 3.1E-10 67.0 12.2 52 101-160 19-70 (175)
249 3hz8_A Thiol:disulfide interch 98.2 4.3E-06 1.5E-10 70.6 9.6 43 108-160 23-65 (193)
250 1h75_A Glutaredoxin-like prote 98.0 1.7E-05 5.7E-10 56.6 7.9 59 113-210 3-61 (81)
251 2ec4_A FAS-associated factor 1 98.0 0.00014 4.9E-09 60.6 13.0 135 82-247 25-174 (178)
252 1r7h_A NRDH-redoxin; thioredox 97.9 4.6E-05 1.6E-09 53.2 7.7 58 113-209 3-60 (75)
253 1kte_A Thioltransferase; redox 97.9 6.1E-06 2.1E-10 62.1 2.9 65 113-211 14-80 (105)
254 2hze_A Glutaredoxin-1; thiored 97.8 1.6E-05 5.3E-10 61.2 4.9 65 112-211 20-87 (114)
255 3gv1_A Disulfide interchange p 97.7 0.00012 3.9E-09 59.1 8.8 91 102-209 7-120 (147)
256 2cq9_A GLRX2 protein, glutared 97.7 7.5E-05 2.6E-09 58.8 7.5 62 116-212 32-93 (130)
257 4f9z_D Endoplasmic reticulum r 97.7 0.00043 1.5E-08 59.5 12.7 68 110-208 132-201 (227)
258 4h86_A Peroxiredoxin type-2; o 97.7 0.00012 4.1E-09 61.7 8.7 103 101-213 59-178 (199)
259 2ht9_A Glutaredoxin-2; thiored 97.7 9.1E-05 3.1E-09 59.7 7.1 59 116-211 54-114 (146)
260 1fov_A Glutaredoxin 3, GRX3; a 97.6 0.00017 5.9E-09 51.2 7.3 61 113-211 3-63 (82)
261 3nzn_A Glutaredoxin; structura 97.6 0.00035 1.2E-08 52.4 9.1 60 112-202 23-83 (103)
262 2klx_A Glutaredoxin; thioredox 97.6 9.1E-05 3.1E-09 53.9 5.1 58 113-210 8-66 (89)
263 3q6o_A Sulfhydryl oxidase 1; p 97.6 0.00025 8.6E-09 61.5 8.9 29 185-213 194-222 (244)
264 4dvc_A Thiol:disulfide interch 97.5 0.00021 7E-09 58.8 7.6 33 108-140 20-52 (184)
265 3c1r_A Glutaredoxin-1; oxidize 97.5 0.00014 4.7E-09 56.3 5.9 67 113-211 27-94 (118)
266 3qmx_A Glutaredoxin A, glutare 97.5 0.00042 1.4E-08 51.8 8.2 62 112-211 17-79 (99)
267 2khp_A Glutaredoxin; thioredox 97.4 0.00045 1.5E-08 50.3 7.5 61 113-211 8-68 (92)
268 2lqo_A Putative glutaredoxin R 97.4 0.00081 2.8E-08 49.6 8.9 62 113-211 6-68 (92)
269 2yan_A Glutaredoxin-3; oxidore 97.4 0.0004 1.4E-08 52.2 7.0 61 112-211 19-84 (105)
270 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.00092 3.1E-08 48.6 8.4 64 113-210 14-78 (92)
271 3us3_A Calsequestrin-1; calciu 97.3 0.00016 5.4E-09 67.0 4.8 31 10-44 76-106 (367)
272 3s9f_A Tryparedoxin; thioredox 97.3 0.00025 8.7E-09 57.7 5.3 59 1-62 104-164 (165)
273 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00054 1.9E-08 52.1 6.6 62 113-211 21-85 (113)
274 1sji_A Calsequestrin 2, calseq 97.3 0.00029 9.8E-09 64.7 5.8 57 109-205 142-198 (350)
275 3msz_A Glutaredoxin 1; alpha-b 97.1 0.0011 3.7E-08 47.6 6.5 64 112-211 5-73 (89)
276 3t58_A Sulfhydryl oxidase 1; o 97.1 0.00057 2E-08 66.3 6.1 28 185-212 194-221 (519)
277 3f4s_A Alpha-DSBA1, putative u 96.9 0.0064 2.2E-07 52.3 10.7 50 103-160 33-83 (226)
278 1i5g_A Tryparedoxin II; electr 96.9 0.0017 5.7E-08 51.0 6.3 58 1-61 84-143 (144)
279 3h8q_A Thioredoxin reductase 3 96.8 0.0027 9.1E-08 48.5 6.4 60 115-211 21-82 (114)
280 1o73_A Tryparedoxin; electron 96.8 0.002 6.9E-08 50.4 5.9 58 1-61 84-143 (144)
281 3ctg_A Glutaredoxin-2; reduced 96.7 0.0024 8.2E-08 50.0 5.9 67 113-211 39-106 (129)
282 1o8x_A Tryparedoxin, TRYX, TXN 96.6 0.0026 8.8E-08 50.1 5.3 59 1-62 84-144 (146)
283 1wik_A Thioredoxin-like protei 96.5 0.0075 2.6E-07 45.5 6.8 62 112-211 17-82 (109)
284 3l9v_A Putative thiol-disulfid 96.4 0.00073 2.5E-08 56.4 1.1 44 108-161 13-59 (189)
285 1aba_A Glutaredoxin; electron 96.0 0.03 1E-06 40.1 7.8 62 113-211 2-77 (87)
286 3feu_A Putative lipoprotein; a 96.0 0.0035 1.2E-07 52.1 3.0 30 109-138 22-51 (185)
287 2e5r_A Dystrobrevin alpha; ZZ 95.7 0.0045 1.5E-07 42.2 2.1 31 272-302 12-44 (63)
288 1un2_A DSBA, thiol-disulfide i 95.5 0.023 7.8E-07 47.7 6.2 23 185-210 39-61 (197)
289 1kbe_A Kinase suppressor of RA 95.5 0.0049 1.7E-07 39.7 1.5 31 272-303 15-45 (49)
290 3tdg_A DSBG, putative uncharac 95.4 0.046 1.6E-06 48.3 8.1 30 108-137 146-175 (273)
291 3ed3_A Protein disulfide-isome 95.3 0.043 1.5E-06 49.0 7.7 22 13-34 79-100 (298)
292 3l9s_A Thiol:disulfide interch 95.0 0.0098 3.3E-07 49.7 2.3 43 108-160 20-65 (191)
293 3l4n_A Monothiol glutaredoxin- 94.9 0.025 8.5E-07 44.1 4.3 21 113-133 16-36 (127)
294 2wci_A Glutaredoxin-4; redox-a 94.9 0.033 1.1E-06 43.9 5.0 61 112-210 37-101 (135)
295 3c7m_A Thiol:disulfide interch 94.8 0.043 1.5E-06 45.1 5.7 44 108-161 16-60 (195)
296 1tot_A CREB-binding protein; z 94.6 0.006 2.1E-07 39.8 -0.1 31 271-302 6-37 (52)
297 3zyw_A Glutaredoxin-3; metal b 94.4 0.097 3.3E-06 39.5 6.5 55 119-211 29-83 (111)
298 2qgv_A Hydrogenase-1 operon pr 94.4 0.029 9.8E-07 44.6 3.5 31 9-43 75-105 (140)
299 2dip_A Zinc finger SWIM domain 94.3 0.012 4.1E-07 43.7 1.2 31 272-302 32-64 (98)
300 1ptq_A Protein kinase C delta 94.2 0.018 6.2E-07 36.9 1.7 36 268-303 8-46 (50)
301 2fnf_X Putative RAS effector N 94.1 0.029 9.9E-07 39.2 2.7 37 267-303 31-67 (72)
302 1faq_A RAF-1; transferase, ser 94.1 0.033 1.1E-06 36.0 2.7 35 269-304 12-46 (52)
303 1t1v_A SH3BGRL3, SH3 domain-bi 94.1 0.15 5E-06 36.9 6.6 60 113-210 4-71 (93)
304 2axo_A Hypothetical protein AT 94.0 0.44 1.5E-05 41.9 10.8 72 110-202 43-120 (270)
305 2r2j_A Thioredoxin domain-cont 94.0 0.052 1.8E-06 50.1 5.0 29 10-42 67-95 (382)
306 2yuu_A NPKC-delta, protein kin 93.9 0.034 1.2E-06 39.9 2.8 36 268-303 25-63 (83)
307 2ct6_A SH3 domain-binding glut 93.8 0.27 9.4E-06 36.9 8.0 39 113-163 10-50 (111)
308 1y8f_A UNC-13 homolog A, MUNC1 93.8 0.03 1E-06 38.3 2.3 35 269-303 22-59 (66)
309 2qsi_A Putative hydrogenase ex 93.7 0.039 1.4E-06 43.6 3.1 30 10-43 74-103 (137)
310 3ipz_A Monothiol glutaredoxin- 93.6 0.17 5.9E-06 37.9 6.4 54 119-210 31-84 (109)
311 3uej_A NPKC-delta, protein kin 93.5 0.03 1E-06 38.2 1.7 36 269-304 18-56 (65)
312 2enz_A NPKC-theta, protein kin 93.5 0.034 1.2E-06 37.9 2.1 36 268-303 20-58 (65)
313 1nm3_A Protein HI0572; hybrid, 93.4 0.17 5.8E-06 43.3 7.0 61 112-211 171-231 (241)
314 1rfh_A RAS association (ralgds 93.4 0.02 6.9E-07 38.3 0.8 37 267-303 18-54 (59)
315 2fc7_A ZZZ3 protein; structure 93.0 0.029 1E-06 40.2 1.2 32 271-302 21-57 (82)
316 2lus_A Thioredoxion; CR-Trp16, 91.8 0.022 7.4E-07 44.1 0.0 46 2-51 86-131 (143)
317 2eli_A Protein kinase C alpha 92.6 0.063 2.2E-06 38.7 2.5 36 269-304 26-64 (85)
318 2db6_A SH3 and cysteine rich d 92.5 0.046 1.6E-06 38.3 1.6 36 269-304 26-64 (74)
319 3gx8_A Monothiol glutaredoxin- 92.4 0.45 1.5E-05 36.3 7.3 54 119-210 29-85 (121)
320 2h8l_A Protein disulfide-isome 92.3 2 6.7E-05 36.8 12.3 53 126-208 150-206 (252)
321 2enn_A NPKC-theta, protein kin 92.0 0.061 2.1E-06 38.0 1.7 37 268-304 31-70 (77)
322 2wem_A Glutaredoxin-related pr 91.7 0.37 1.3E-05 36.7 6.1 54 119-210 33-87 (118)
323 3gha_A Disulfide bond formatio 91.6 0.37 1.3E-05 40.2 6.6 49 104-160 24-73 (202)
324 2l4c_A Endoplasmic reticulum r 91.2 0.51 1.8E-05 36.3 6.5 56 109-205 39-94 (124)
325 3zzx_A Thioredoxin; oxidoreduc 90.9 0.076 2.6E-06 39.5 1.4 29 10-42 58-86 (105)
326 3gmf_A Protein-disulfide isome 90.8 0.7 2.4E-05 38.7 7.5 51 102-160 8-59 (205)
327 3gn3_A Putative protein-disulf 90.1 0.45 1.5E-05 39.1 5.5 43 108-159 13-55 (182)
328 3bci_A Disulfide bond protein 89.9 0.42 1.4E-05 38.9 5.3 45 108-160 10-55 (186)
329 2es7_A Q8ZP25_salty, putative 89.6 0.27 9.3E-06 38.7 3.7 29 10-42 76-104 (142)
330 4b6d_A RAC GTPase-activating p 89.3 0.17 5.7E-06 34.0 1.9 34 269-302 17-52 (61)
331 2ju5_A Thioredoxin disulfide i 89.0 0.23 8E-06 39.3 2.9 29 12-43 103-131 (154)
332 2vrw_B P95VAV, VAV1, proto-onc 88.9 0.54 1.8E-05 43.6 5.8 38 267-304 353-393 (406)
333 1u6t_A SH3 domain-binding glut 87.5 2.7 9.3E-05 32.1 8.0 42 112-163 1-42 (121)
334 2row_A RHO-associated protein 85.7 0.19 6.5E-06 36.1 0.5 35 268-302 32-71 (84)
335 3hxs_A Thioredoxin, TRXP; elec 85.4 0.34 1.2E-05 37.2 1.9 29 12-43 92-120 (141)
336 2fwh_A Thiol:disulfide interch 85.2 0.71 2.4E-05 35.3 3.7 28 12-42 78-105 (134)
337 2l57_A Uncharacterized protein 85.0 0.52 1.8E-05 35.4 2.7 29 11-42 68-96 (126)
338 2jad_A Yellow fluorescent prot 84.5 1.2 4.1E-05 40.8 5.4 22 186-210 308-329 (362)
339 3h79_A Thioredoxin-like protei 84.4 0.42 1.4E-05 36.1 2.0 25 10-34 77-101 (127)
340 2l5l_A Thioredoxin; structural 83.4 0.47 1.6E-05 36.4 1.9 28 12-42 79-106 (136)
341 2kuc_A Putative disulphide-iso 83.0 0.85 2.9E-05 34.3 3.2 27 13-42 74-100 (130)
342 3ky9_A Proto-oncogene VAV; cal 82.9 1.4 4.9E-05 42.9 5.5 35 269-303 527-564 (587)
343 3bj5_A Protein disulfide-isome 82.7 4 0.00014 32.0 7.2 51 124-205 47-99 (147)
344 3qfa_C Thioredoxin; protein-pr 82.5 0.64 2.2E-05 34.5 2.3 27 12-42 71-97 (116)
345 4f9z_D Endoplasmic reticulum r 82.3 1.4 4.9E-05 37.0 4.7 56 109-205 27-82 (227)
346 3f3q_A Thioredoxin-1; His TAG, 81.7 0.55 1.9E-05 34.5 1.6 27 12-42 64-90 (109)
347 3eur_A Uncharacterized protein 81.3 0.98 3.4E-05 34.5 3.0 32 10-44 98-129 (142)
348 3fk8_A Disulphide isomerase; A 81.3 0.78 2.7E-05 34.7 2.4 29 12-43 75-106 (133)
349 1zma_A Bacterocin transport ac 81.2 1 3.4E-05 33.3 3.0 28 11-42 73-100 (118)
350 2l6c_A Thioredoxin; oxidoreduc 80.9 0.8 2.7E-05 33.6 2.3 29 10-42 57-85 (110)
351 1gh2_A Thioredoxin-like protei 80.8 0.64 2.2E-05 33.7 1.7 27 12-42 61-87 (107)
352 3pfq_A PKC-B, PKC-beta, protei 80.5 1 3.5E-05 44.7 3.5 36 269-304 111-149 (674)
353 3uvt_A Thioredoxin domain-cont 80.4 0.65 2.2E-05 33.6 1.6 29 10-42 63-91 (111)
354 3ul3_B Thioredoxin, thioredoxi 80.3 0.79 2.7E-05 34.6 2.1 29 10-42 81-109 (128)
355 3gnj_A Thioredoxin domain prot 80.2 0.66 2.3E-05 33.6 1.6 27 12-42 63-89 (111)
356 3die_A Thioredoxin, TRX; elect 79.9 0.66 2.3E-05 33.2 1.5 27 12-42 60-86 (106)
357 1t4y_A Adaptive-response senso 79.5 14 0.00049 27.2 8.6 64 112-206 13-76 (105)
358 4fo5_A Thioredoxin-like protei 79.2 1 3.5E-05 34.5 2.5 28 14-44 102-129 (143)
359 3emx_A Thioredoxin; structural 79.2 1.4 4.6E-05 33.7 3.2 27 12-42 79-105 (135)
360 3d6i_A Monothiol glutaredoxin- 79.0 0.77 2.6E-05 33.5 1.6 27 12-42 63-89 (112)
361 4euy_A Uncharacterized protein 79.0 0.37 1.3E-05 35.0 -0.2 26 13-42 59-84 (105)
362 2lrn_A Thiol:disulfide interch 78.9 2 6.8E-05 33.2 4.2 28 14-44 98-125 (152)
363 3tco_A Thioredoxin (TRXA-1); d 78.8 0.77 2.6E-05 33.0 1.6 27 12-42 62-88 (109)
364 2dml_A Protein disulfide-isome 78.4 0.8 2.7E-05 34.4 1.6 23 12-34 76-98 (130)
365 2dj1_A Protein disulfide-isome 78.3 0.98 3.3E-05 34.4 2.1 29 10-42 76-104 (140)
366 1x5e_A Thioredoxin domain cont 78.1 0.82 2.8E-05 34.2 1.6 27 12-42 64-90 (126)
367 1nsw_A Thioredoxin, TRX; therm 78.0 0.8 2.7E-05 32.8 1.4 26 13-42 59-84 (105)
368 1oaz_A Thioredoxin 1; immune s 77.9 0.41 1.4E-05 36.3 -0.2 26 13-42 77-102 (123)
369 3m9j_A Thioredoxin; oxidoreduc 77.8 0.81 2.8E-05 32.7 1.4 27 12-42 60-86 (105)
370 3ga4_A Dolichyl-diphosphooligo 77.4 0.83 2.9E-05 37.5 1.5 25 10-34 88-112 (178)
371 2xc2_A Thioredoxinn; oxidoredu 77.1 0.96 3.3E-05 33.3 1.7 27 12-42 72-98 (117)
372 1dby_A Chloroplast thioredoxin 76.7 0.94 3.2E-05 32.6 1.5 26 13-42 61-86 (107)
373 2wz9_A Glutaredoxin-3; protein 76.2 1 3.5E-05 35.3 1.7 27 12-42 72-98 (153)
374 1t00_A Thioredoxin, TRX; redox 76.1 0.98 3.4E-05 32.8 1.5 26 13-42 65-90 (112)
375 1xfl_A Thioredoxin H1; AT3G510 75.9 1.1 3.7E-05 33.8 1.7 27 12-42 78-104 (124)
376 3kgk_A Arsenical resistance op 75.9 18 0.00061 27.0 8.3 60 128-212 26-85 (110)
377 1xwb_A Thioredoxin; dimerizati 75.8 1.1 3.7E-05 32.1 1.6 26 13-42 62-87 (106)
378 3hdc_A Thioredoxin family prot 75.8 2.8 9.6E-05 32.5 4.3 26 14-42 104-129 (158)
379 3p2a_A Thioredoxin 2, putative 75.7 0.99 3.4E-05 34.9 1.5 28 11-42 95-122 (148)
380 1fb6_A Thioredoxin M; electron 75.6 1.1 3.8E-05 31.9 1.6 26 13-42 60-85 (105)
381 2vim_A Thioredoxin, TRX; thior 75.2 1.1 3.9E-05 31.8 1.6 26 13-42 60-85 (104)
382 1w4v_A Thioredoxin, mitochondr 75.1 1.2 4E-05 33.1 1.7 27 12-42 72-98 (119)
383 2in3_A Hypothetical protein; D 75.0 2.7 9.2E-05 34.7 4.1 25 185-210 165-189 (216)
384 1ep7_A Thioredoxin CH1, H-type 75.0 0.96 3.3E-05 32.8 1.2 27 12-42 65-91 (112)
385 2oe3_A Thioredoxin-3; electron 74.8 1.1 3.8E-05 33.1 1.5 27 12-42 70-96 (114)
386 1thx_A Thioredoxin, thioredoxi 74.6 1 3.6E-05 32.7 1.3 26 13-42 67-92 (115)
387 2vlu_A Thioredoxin, thioredoxi 74.6 1.1 3.8E-05 33.1 1.5 27 12-42 74-100 (122)
388 2voc_A Thioredoxin; electron t 74.3 0.64 2.2E-05 34.2 0.0 26 13-42 59-84 (112)
389 2e0q_A Thioredoxin; electron t 74.2 1.2 4E-05 31.5 1.5 26 13-42 57-82 (104)
390 2yzu_A Thioredoxin; redox prot 74.1 1.2 4E-05 31.9 1.4 26 13-42 60-85 (109)
391 1syr_A Thioredoxin; SGPP, stru 73.9 1.4 4.8E-05 32.1 1.9 26 13-42 67-92 (112)
392 3fkf_A Thiol-disulfide oxidore 73.9 2.5 8.4E-05 32.1 3.4 28 14-44 103-130 (148)
393 2i1u_A Thioredoxin, TRX, MPT46 73.6 1.3 4.5E-05 32.6 1.6 27 12-42 71-97 (121)
394 2trx_A Thioredoxin; electron t 73.6 0.85 2.9E-05 32.9 0.5 26 13-42 62-87 (108)
395 3dwv_A Glutathione peroxidase- 73.2 1.2 4.2E-05 36.1 1.5 12 282-293 52-63 (187)
396 1r26_A Thioredoxin; redox-acti 73.2 1.3 4.3E-05 33.6 1.5 27 12-42 77-103 (125)
397 2vm1_A Thioredoxin, thioredoxi 73.2 1.3 4.6E-05 32.3 1.6 27 12-42 68-94 (118)
398 2lja_A Putative thiol-disulfid 73.1 2 6.8E-05 33.0 2.7 26 15-43 98-123 (152)
399 3ktb_A Arsenical resistance op 73.1 26 0.00088 26.0 9.2 75 113-212 8-88 (106)
400 2i4a_A Thioredoxin; acidophIle 73.0 0.94 3.2E-05 32.4 0.7 26 13-42 62-87 (107)
401 3aps_A DNAJ homolog subfamily 72.9 0.8 2.7E-05 34.0 0.3 23 12-34 62-84 (122)
402 2f51_A Thioredoxin; electron t 72.9 1 3.5E-05 33.5 0.9 22 12-33 63-84 (118)
403 3ira_A Conserved protein; meth 72.7 1.4 4.7E-05 35.9 1.7 32 10-44 81-120 (173)
404 1z3e_A Regulatory protein SPX; 72.7 24 0.00082 26.8 8.9 43 113-171 3-48 (132)
405 2ppt_A Thioredoxin-2; thiredox 72.6 1.2 4E-05 35.2 1.2 27 12-42 105-131 (155)
406 4evm_A Thioredoxin family prot 72.4 2.7 9.3E-05 31.0 3.2 26 14-42 93-118 (138)
407 3fw2_A Thiol-disulfide oxidore 71.3 3 0.0001 32.0 3.4 28 14-44 105-132 (150)
408 3kij_A Probable glutathione pe 71.2 0.9 3.1E-05 36.6 0.2 11 282-292 44-54 (180)
409 1ti3_A Thioredoxin H, PTTRXH1; 70.6 1.2 4.3E-05 32.2 0.9 27 12-42 66-92 (113)
410 2j23_A Thioredoxin; immune pro 70.5 1.5 5E-05 32.7 1.3 26 13-42 76-101 (121)
411 3feu_A Putative lipoprotein; a 70.5 2.3 7.9E-05 34.6 2.6 23 185-210 141-163 (185)
412 3ph9_A Anterior gradient prote 70.3 3.4 0.00012 32.7 3.5 24 17-43 92-115 (151)
413 2kok_A Arsenate reductase; bru 70.1 3.4 0.00012 31.2 3.3 47 113-175 7-56 (120)
414 3hz4_A Thioredoxin; NYSGXRC, P 69.8 1 3.5E-05 34.6 0.3 27 12-42 65-91 (140)
415 1x5d_A Protein disulfide-isome 69.8 1.1 3.7E-05 33.7 0.3 22 12-33 70-91 (133)
416 2dj0_A Thioredoxin-related tra 69.7 2.6 8.9E-05 32.0 2.6 29 10-42 66-100 (137)
417 2b5x_A YKUV protein, TRXY; thi 69.6 3.4 0.00012 31.1 3.3 27 14-43 99-125 (148)
418 2pu9_C TRX-F, thioredoxin F-ty 69.3 2.8 9.6E-05 30.3 2.6 25 14-42 67-91 (111)
419 3cxl_A N-chimerin; SH2, RHO-GA 69.3 1.6 5.5E-05 41.3 1.5 36 268-303 217-255 (463)
420 2wul_A Glutaredoxin related pr 69.1 11 0.00037 28.5 5.9 54 119-210 33-87 (118)
421 3d22_A TRXH4, thioredoxin H-ty 68.8 1.4 4.8E-05 33.5 0.8 27 12-42 86-112 (139)
422 1v98_A Thioredoxin; oxidoreduc 68.7 1.8 6.2E-05 33.0 1.5 26 13-42 92-117 (140)
423 2h30_A Thioredoxin, peptide me 68.5 3.6 0.00012 31.9 3.3 28 13-43 109-136 (164)
424 3lor_A Thiol-disulfide isomera 68.3 3.7 0.00012 31.7 3.3 24 17-43 112-135 (160)
425 1zzo_A RV1677; thioredoxin fol 68.3 3.8 0.00013 30.3 3.2 26 14-42 90-115 (136)
426 2f8a_A Glutathione peroxidase 68.2 1.1 3.6E-05 37.5 -0.0 11 282-292 53-63 (208)
427 3cxg_A Putative thioredoxin; m 68.1 1.9 6.4E-05 32.9 1.5 21 12-32 79-99 (133)
428 3eyt_A Uncharacterized protein 67.4 3.7 0.00013 31.6 3.1 25 16-43 108-132 (158)
429 3ia1_A THIO-disulfide isomeras 67.2 4.1 0.00014 31.2 3.3 27 13-42 97-123 (154)
430 2dlx_A UBX domain-containing p 67.1 3.9 0.00013 32.5 3.2 28 12-42 88-116 (153)
431 3erw_A Sporulation thiol-disul 66.9 2.9 0.0001 31.4 2.4 26 14-42 103-128 (145)
432 2lst_A Thioredoxin; structural 70.2 1.2 4E-05 33.5 0.0 27 13-41 66-92 (130)
433 3raz_A Thioredoxin-related pro 66.7 3.9 0.00013 31.4 3.1 27 13-42 91-119 (151)
434 2lrt_A Uncharacterized protein 66.7 3 0.0001 32.3 2.4 25 16-43 104-128 (152)
435 1lu4_A Soluble secreted antige 66.3 4.4 0.00015 30.0 3.3 26 14-42 88-113 (136)
436 1rw1_A Conserved hypothetical 66.3 3.2 0.00011 31.0 2.4 45 114-174 3-50 (114)
437 1faa_A Thioredoxin F; electron 66.3 3.2 0.00011 30.7 2.4 25 14-42 80-104 (124)
438 3gl3_A Putative thiol:disulfid 66.2 4.3 0.00015 30.9 3.3 26 15-43 95-120 (152)
439 2v1m_A Glutathione peroxidase; 66.1 1.2 4.2E-05 34.9 0.0 11 282-292 37-47 (169)
440 3dml_A Putative uncharacterize 65.8 2 6.8E-05 32.6 1.1 25 15-43 66-90 (116)
441 2lcq_A Putative toxin VAPC6; P 65.8 1.8 6.1E-05 34.8 0.9 20 283-302 130-157 (165)
442 1hyu_A AHPF, alkyl hydroperoxi 65.8 9.9 0.00034 36.2 6.4 24 112-135 21-44 (521)
443 3gix_A Thioredoxin-like protei 65.8 1.7 5.7E-05 34.1 0.7 27 12-42 64-90 (149)
444 1z6n_A Hypothetical protein PA 65.5 5.3 0.00018 32.0 3.7 31 10-43 92-125 (167)
445 3qou_A Protein YBBN; thioredox 65.3 2.3 7.8E-05 36.8 1.6 28 11-42 66-93 (287)
446 2x8g_A Thioredoxin glutathione 65.2 3.2 0.00011 40.2 2.8 21 113-133 20-40 (598)
447 2f9s_A Thiol-disulfide oxidore 64.9 4.4 0.00015 30.9 3.1 27 14-43 92-118 (151)
448 1qgv_A Spliceosomal protein U5 64.8 0.98 3.4E-05 35.1 -0.8 28 12-43 64-91 (142)
449 3kzq_A Putative uncharacterize 64.7 7.8 0.00027 31.8 4.8 27 185-212 158-184 (208)
450 2yj7_A LPBCA thioredoxin; oxid 67.9 1.4 4.8E-05 31.2 0.0 29 10-42 58-86 (106)
451 3ec3_A Protein disulfide-isome 63.7 18 0.0006 30.6 7.0 57 109-205 25-81 (250)
452 3ha9_A Uncharacterized thiored 63.5 4.6 0.00016 31.4 3.0 26 15-43 120-145 (165)
453 2o8v_B Thioredoxin 1; disulfid 63.1 1.1 3.8E-05 33.9 -0.8 26 13-42 82-107 (128)
454 3hcz_A Possible thiol-disulfid 63.0 4.4 0.00015 30.6 2.7 24 17-43 103-126 (148)
455 2av4_A Thioredoxin-like protei 62.5 1 3.5E-05 36.3 -1.1 28 11-42 81-108 (160)
456 3f9u_A Putative exported cytoc 62.0 3.9 0.00013 32.3 2.3 23 18-43 123-145 (172)
457 3gv1_A Disulfide interchange p 62.0 6.4 0.00022 30.9 3.5 22 10-31 94-115 (147)
458 2p31_A CL683, glutathione pero 61.5 1.7 5.8E-05 35.0 0.0 11 282-292 55-65 (181)
459 3pfq_A PKC-B, PKC-beta, protei 61.5 1.7 5.8E-05 43.1 0.0 36 269-304 46-84 (674)
460 1mek_A Protein disulfide isome 61.4 1 3.5E-05 32.9 -1.3 24 14-41 70-93 (120)
461 2qc7_A ERP31, ERP28, endoplasm 61.1 7.4 0.00025 33.3 4.0 23 11-33 67-91 (240)
462 3apq_A DNAJ homolog subfamily 60.9 3.3 0.00011 34.1 1.7 26 12-41 155-180 (210)
463 2l5o_A Putative thioredoxin; s 60.8 4.9 0.00017 30.6 2.7 26 14-42 95-120 (153)
464 1nho_A Probable thioredoxin; b 60.4 2.1 7E-05 29.2 0.3 20 12-31 42-61 (85)
465 3ewl_A Uncharacterized conserv 60.1 5 0.00017 30.2 2.5 23 18-43 102-124 (142)
466 2r37_A Glutathione peroxidase 60.0 2.6 8.9E-05 35.1 0.9 23 261-291 31-53 (207)
467 2ggt_A SCO1 protein homolog, m 59.1 6.8 0.00023 30.2 3.2 31 10-43 96-141 (164)
468 2gs3_A PHGPX, GPX-4, phospholi 59.1 2.1 7.2E-05 34.5 0.2 11 282-292 55-65 (185)
469 2vup_A Glutathione peroxidase- 59.0 2.3 7.9E-05 34.4 0.4 10 282-291 54-63 (190)
470 1kng_A Thiol:disulfide interch 58.8 7 0.00024 29.8 3.2 27 14-43 106-132 (156)
471 2djk_A PDI, protein disulfide- 58.2 4.8 0.00017 30.5 2.1 24 10-33 61-86 (133)
472 1wmj_A Thioredoxin H-type; str 58.0 1.6 5.6E-05 32.5 -0.6 28 11-42 75-102 (130)
473 3iv4_A Putative oxidoreductase 57.5 5 0.00017 30.2 2.0 26 15-44 70-96 (112)
474 2h8l_A Protein disulfide-isome 57.5 15 0.0005 31.1 5.4 56 110-205 25-80 (252)
475 3kcm_A Thioredoxin family prot 56.9 6.6 0.00022 29.9 2.8 26 15-43 96-121 (154)
476 2dj3_A Protein disulfide-isome 56.8 1.5 5.3E-05 32.9 -1.0 23 12-34 68-90 (133)
477 3kzq_A Putative uncharacterize 56.8 14 0.00048 30.2 5.0 39 111-159 3-41 (208)
478 1ilo_A Conserved hypothetical 56.7 5.3 0.00018 26.5 1.9 18 14-31 39-56 (77)
479 2in3_A Hypothetical protein; D 56.5 18 0.00062 29.4 5.7 39 111-159 8-46 (216)
480 2g2q_A Glutaredoxin-2; thiored 56.2 5.2 0.00018 30.3 1.8 86 110-216 2-90 (124)
481 1xzo_A BSSCO, hypothetical pro 56.1 4.2 0.00014 31.9 1.5 12 282-293 39-51 (174)
482 3kp8_A Vkorc1/thioredoxin doma 55.6 6.1 0.00021 28.9 2.2 19 13-31 54-72 (106)
483 2b1k_A Thiol:disulfide interch 54.5 7.8 0.00027 30.1 2.9 26 14-42 114-139 (168)
484 2i3y_A Epididymal secretory gl 54.1 2.8 9.7E-05 35.2 0.1 11 282-292 62-72 (215)
485 3ec3_A Protein disulfide-isome 53.8 16 0.00054 31.0 4.9 19 15-34 63-81 (250)
486 1wou_A Thioredoxin -related pr 53.3 12 0.0004 27.7 3.6 22 13-34 80-101 (123)
487 4g2e_A Peroxiredoxin; redox pr 52.7 4.4 0.00015 31.7 1.1 14 282-295 36-50 (157)
488 1x4s_A Protein FON, zinc finge 52.3 7.4 0.00025 25.7 1.9 33 270-302 10-51 (59)
489 3l9v_A Putative thiol-disulfid 51.9 41 0.0014 26.9 7.0 23 185-210 134-156 (189)
490 3rdw_A Putative arsenate reduc 51.3 30 0.001 25.9 5.7 46 113-174 7-55 (121)
491 3dxb_A Thioredoxin N-terminall 51.3 2.9 9.9E-05 34.9 -0.2 27 12-42 71-97 (222)
492 3fz4_A Putative arsenate reduc 50.9 54 0.0018 24.4 7.0 44 113-172 5-51 (120)
493 3kh7_A Thiol:disulfide interch 50.2 9.8 0.00033 30.2 2.9 27 14-43 121-147 (176)
494 3gha_A Disulfide bond formatio 50.1 22 0.00077 29.0 5.2 22 185-209 152-173 (202)
495 3h0g_L DNA-directed RNA polyme 50.0 7.5 0.00026 26.0 1.7 26 270-295 20-48 (63)
496 3l9s_A Thiol:disulfide interch 49.7 21 0.00072 28.9 4.9 23 185-210 140-162 (191)
497 2rli_A SCO2 protein homolog, m 49.6 15 0.00051 28.4 3.8 31 10-43 99-144 (171)
498 2c0g_A ERP29 homolog, windbeut 49.4 4.6 0.00016 34.8 0.7 20 14-33 82-103 (248)
499 1wwj_A Circadian clock protein 47.3 8.3 0.00028 28.6 1.7 63 108-202 5-67 (105)
500 3bci_A Disulfide bond protein 47.2 12 0.00041 29.9 3.0 22 185-209 138-159 (186)
No 1
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.93 E-value=3.4e-25 Score=179.62 Aligned_cols=136 Identities=35% Similarity=0.670 Sum_probs=122.0
Q ss_pred hcCCCCC-eEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pd-f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
++..+|+ |.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++++++ .+++|++|++|.+
T Consensus 3 ~~~~~P~~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAA-DIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK--------KNFEVMLISWDES 73 (144)
T ss_dssp TTTSCSSCSEEEETTEE-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCSS
T ss_pred hhhhCCCceEEEcCCCC-EecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCCC
Confidence 5788999 999 99999 99999999999999999999999999999999999999841 3799999999999
Q ss_pred HHHHHHHHhcCCCcccccCc-hhHHHHHHhCCCCccceEEEEC-CCCcEEEeccchhhhccc-ccCCCCc
Q 021505 163 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLINLYQ-ENAYPFT 229 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~Pt~vlid-~~G~iv~~~g~~~~~~~g-~~~~p~~ 229 (311)
.+.+++++.+++|..+|+.. +....+.+.|+|.++|+++||| ++|+|+.++++..+.... ...|||.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 74 AEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 99999999999999999876 5567999999999999999999 999999999888776554 3556764
No 2
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.92 E-value=5.7e-25 Score=183.43 Aligned_cols=137 Identities=34% Similarity=0.731 Sum_probs=120.2
Q ss_pred HhcCCCCCe-Ee-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 84 LLTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 84 ~~g~~~pdf-~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
.+|.++|+| .+ +.+| .+++++++||+|||+|||+||++|+.++|.|.+++++|+++ .+++||+|++|.
T Consensus 23 ~vG~~~P~f~~l~~~~g--~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~v~vv~v~~d~ 92 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD--TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS--------KNFEIILASWDE 92 (165)
T ss_dssp HHHHHHHHTSCEEETTE--EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCC
T ss_pred hhcccCCcceeeecCCC--cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC--------CCeEEEEEecCC
Confidence 367778888 77 7776 79999999999999999999999999999999999999852 379999999999
Q ss_pred CHHHHHHHHhcCCCcccccCchhH-HHHHHhCCCCccceEEEECCC-CcEEEeccchhhhc-ccccCCCCcH
Q 021505 162 DQTSFESYFGTMPWLALPFGDPTI-KELTKYFDVQGIPCLVIIGPE-GKTVTKQGRNLINL-YQENAYPFTE 230 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d~~-~~l~~~~~v~~~Pt~vlid~~-G~iv~~~g~~~~~~-~g~~~~p~~~ 230 (311)
+.+.+++++++++|..+|+..+.. ..+++.|+|.++|+++|||++ |+|+.++++..+.. .....|||.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 93 EEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 999999999999999999877644 799999999999999999998 99999998776643 3456688864
No 3
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.91 E-value=4.1e-24 Score=172.54 Aligned_cols=117 Identities=15% Similarity=0.278 Sum_probs=107.4
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHH---HHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+ ++++++++ +++|++|++|
T Consensus 3 ~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~---------~~~~v~v~~d 72 (142)
T 3ewl_A 3 AGMKAADFTYVTVHGD-NSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG---------TLRVLAIYPD 72 (142)
T ss_dssp TTSBCCCCEEECTTCC-EEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT---------SEEEEEEECS
T ss_pred CCCcCCCCEEECCCCC-EEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC---------CeEEEEEEec
Confidence 6899999999 99999 999999999999999999999999999999988 99999865 7999999999
Q ss_pred CCHHHHHHHHhcCCCcccccCchhHHHHHH--hCCCCccceEEEECCCCcEEEe
Q 021505 161 RDQTSFESYFGTMPWLALPFGDPTIKELTK--YFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~--~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.+.++++.++++ +.+|...|....+.. .|+|.++|+++|||++|+|+.+
T Consensus 73 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 73 ENREEWATKAVYMP-QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp SCHHHHHHHHTTSC-TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred CCHHHHHHHHHHcC-CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 99999999999887 577777776777766 9999999999999999999985
No 4
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.91 E-value=6.6e-24 Score=172.54 Aligned_cols=136 Identities=37% Similarity=0.725 Sum_probs=120.0
Q ss_pred hcCCCCC-eEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pd-f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
++..+|+ |.+ +.+| .+++++++||+++|+||++||++|+.++|.|.+++++++++ .+++|++|++|.+
T Consensus 4 ~~~~~P~~f~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG--EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES--------KNFEVVFCTWDEE 73 (146)
T ss_dssp GGGTSTTCCEEEETTE--EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCCS
T ss_pred hHhhCCCceEEEcCCC--CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc--------CCeEEEEEeCCCC
Confidence 6788999 899 8887 79999999999999999999999999999999999999841 3799999999999
Q ss_pred HHHHHHHHhcCCCcccccCc-hhHHHHHHhCCCCccceEEEEC-CCCcEEEeccchhhhccc-ccCCCCcH
Q 021505 163 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLINLYQ-ENAYPFTE 230 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~Pt~vlid-~~G~iv~~~g~~~~~~~g-~~~~p~~~ 230 (311)
.+.+++++++++|..+|+.. +....+.+.|+|.++|+++||| ++|+++.++++..+...+ ...|+|.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 74 EDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp HHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred HHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCC
Confidence 99999999999999999876 5567999999999999999999 899999998877765543 34567654
No 5
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.91 E-value=3.5e-24 Score=173.37 Aligned_cols=120 Identities=13% Similarity=0.199 Sum_probs=107.3
Q ss_pred HHhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHH---HHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 83 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
..+|.++|+|.+ +.+|+ .+++++++||++||+|||+||++|+.++|.|.+ ++++++++ +++|++|+
T Consensus 5 ~~~G~~ap~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~---------~~~vi~i~ 74 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGV-KGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK---------KLKVLSIY 74 (142)
T ss_dssp TCTTSBCCCCEEEETTSC-EEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT---------SEEEEEEE
T ss_pred hcCCCccCCcEEEcCCCC-EeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC---------CeEEEEEE
Confidence 458999999999 99999 999999999999999999999999999999999 99999864 89999999
Q ss_pred cCCCHHHHHHHHhcCCCcccccCchhHH--HHHHhCCCCccceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTMPWLALPFGDPTIK--ELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~~~p~~~d~~~--~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
.|.+.+.+++++.+++ ..++...|... .+.+.|+|.++|+++|||++|+|+.++
T Consensus 75 ~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 75 PDEELDEWKKHRNDFA-KEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp CSSCHHHHHHHGGGSC-TTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred cCCCHHHHHHHHHhcc-cccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 9999999999999887 34555444333 478999999999999999999999883
No 6
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.91 E-value=9.6e-24 Score=170.74 Aligned_cols=135 Identities=41% Similarity=0.768 Sum_probs=118.8
Q ss_pred hcCCCCCe-Ee-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf-~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|..+|+| .+ +.+| .+++++++||+++|+||++||++|+.++|.|.++++++++. .+++|++|++|.+
T Consensus 4 ~g~~~p~~~~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~i~~d~~ 73 (144)
T 1o73_A 4 LAKYLPGATNLLSKSG--EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA--------KNFEVVLISWDEN 73 (144)
T ss_dssp GGGTSCTTCCBBCTTS--CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCSS
T ss_pred hhhhCccceEeecCCC--cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCCC
Confidence 68899997 88 7777 69999999999999999999999999999999999999731 3799999999999
Q ss_pred HHHHHHHHhcCCCcccccCc-hhHHHHHHhCCCCccceEEEEC-CCCcEEEeccchhhhcccc-cCCCCc
Q 021505 163 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLINLYQE-NAYPFT 229 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~Pt~vlid-~~G~iv~~~g~~~~~~~g~-~~~p~~ 229 (311)
.+.+++++++++|..+|+.. +....+.+.|+|.++|+++|+| ++|+++.+.+...+...+. ..|||.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 74 ESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCC
Confidence 99999999999999999876 5567899999999999999999 8999999998877765543 456664
No 7
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=2e-23 Score=170.46 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=106.6
Q ss_pred hcCCCCCeEe-eCCCCceeecc--ccCCCEEEEEEecCCChh--hHhhhHHHHHHHHHH-HhhhhhcCCCCCCeEEEEEe
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIP--CEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~--~~~gk~vll~F~a~wC~~--C~~~~p~l~~l~~~~-~~~~~~~~~~~~~~~vv~Vs 158 (311)
+|.++|+|.+ +.+|+ +++++ +++||+++|+||++||++ |+.++|.|.+++++| ++ .+++|++|+
T Consensus 7 ~G~~~p~f~l~~~~g~-~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~---------~~~~~v~v~ 76 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGE-KITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN---------KYIGMLGIS 76 (150)
T ss_dssp TTSBCCCCCEEBTTCC-EECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC---------SSEEEEEEE
T ss_pred CCCcCCccEeECCCCC-EEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC---------CCeEEEEEE
Confidence 6899999999 99999 99999 999999999999999999 999999999999999 54 379999999
Q ss_pred cCCCHHHHHHHHhcCCCcccccCchh---HHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
+|.+.+.+++++++++ +.+|...|. ...+.+.|+|.++|+++|||++|+|+.+.
T Consensus 77 ~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 77 LDVDKQQWKDAIKRDT-LDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp CCSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred cCCCHHHHHHHHHHhC-CCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 9999999999998776 355554443 56999999999999999999999999984
No 8
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.91 E-value=4.5e-24 Score=172.93 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=99.6
Q ss_pred hcCCCCCeEeeCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 85 LTNHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 85 ~g~~~pdf~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
+|.++|+|.++.+|+ .+++++++||++||+|||+||++|+.++|.|.+++++|+++ +++||+|++|.+.+
T Consensus 9 ~G~~~P~f~l~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~~~ 78 (143)
T 4fo5_A 9 PGDLAPRIEFLGNDA-KASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD---------KIAMCSISMDEKES 78 (143)
T ss_dssp TTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT---------TEEEEEEECCSCHH
T ss_pred CcccCCceEEcCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC---------CEEEEEEEccCCHH
Confidence 689999999988899 99999999999999999999999999999999999998754 79999999999999
Q ss_pred HHHHHHhcCCCccc-cc---CchhHHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 165 SFESYFGTMPWLAL-PF---GDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 165 ~~~~~~~~~~~~~~-p~---~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
.+++++++++ +.+ +. ..+....+.+.|+|.++|+++|||++|+|+.++
T Consensus 79 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 79 IFTETVKIDK-LDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHHHHHHHT-CCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred HHHHHHHHhC-CCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 9999998665 223 22 222346899999999999999999999999884
No 9
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.90 E-value=2.4e-23 Score=170.35 Aligned_cols=118 Identities=24% Similarity=0.317 Sum_probs=107.1
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|.++ +++|++|++|.+.
T Consensus 5 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 74 (152)
T 2lrn_A 5 TGSVAPAITGIDLKGN-SVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK---------GFTIYGVSTDRRE 74 (152)
T ss_dssp TTEECCCCEEECSSSC-EEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT---------TEEEEEEECCSCH
T ss_pred CCCcCCCceeEcCCCC-EEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC---------CeEEEEEEccCCH
Confidence 6888999999 99999 99999999999999999999999999999999999999864 7999999999999
Q ss_pred HHHHHHHhcCCCcccccCchh---HHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 164 TSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
+.+++++.+++ +.+|...|. ...+.+.|+|.++|+++|||++|+++.+.
T Consensus 75 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 75 EDWKKAIEEDK-SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HHHHHHHHHHT-CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred HHHHHHHHHhC-CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 99999998765 456666665 67899999999999999999999999883
No 10
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.90 E-value=2.3e-23 Score=169.97 Aligned_cols=117 Identities=26% Similarity=0.496 Sum_probs=108.2
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.++++++.++ ++.|++|++|.+.
T Consensus 2 ~G~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~v~~d~~~ 71 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGK-RIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ---------GVEIVAVNVGESK 71 (151)
T ss_dssp CCEECCCCEEECTTCC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEEESCCH
T ss_pred CCCcCCcceeEcCCCC-EEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCCH
Confidence 5788999999 99999 99999999999999999999999999999999999999865 7999999999998
Q ss_pred HHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 164 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.++++.++++ +.+|+..|....+.+.|+|.++|+++|||++|+++.+
T Consensus 72 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 72 IAVHNFMKSYG-VNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp HHHHHHHHHHT-CCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred HHHHHHHHHcC-CCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 99999998877 4678777777899999999999999999999999987
No 11
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.90 E-value=3.3e-23 Score=171.65 Aligned_cols=116 Identities=17% Similarity=0.223 Sum_probs=107.4
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCE-EEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKT-VGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~-vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
+|.++|+|.+ +.+|+ ++++++++||+ ++|+|| ++||++|+.++|.|.+++++|+++ +++||+|++|
T Consensus 4 ~G~~~P~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~d- 72 (161)
T 3drn_A 4 VGDKAPLFEGIADNGE-KISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY---------DVVVIGVSSD- 72 (161)
T ss_dssp TTSBCCCCEEEETTSC-EEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT---------CEEEEEEESC-
T ss_pred CCCcCCCeEeecCCCC-EEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEeCC-
Confidence 6899999999 99999 99999999998 999999 999999999999999999999865 7999999998
Q ss_pred CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCc----cceEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG----IPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~----~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++.++++ +.+|+..|....+.+.|++.+ +|+++|||++|+|+.+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 73 DINSHKRFKEKYK-LPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp CHHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHHhC-CCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 4778999999887 568888887889999999999 9999999999999988
No 12
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.90 E-value=8.6e-24 Score=171.14 Aligned_cols=119 Identities=14% Similarity=0.216 Sum_probs=108.9
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
.+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++.|++|++|.+
T Consensus 6 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 75 (148)
T 3hcz_A 6 LLGKKAPNLYMTDTTGT-YRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK---------GIQVYAANIERK 75 (148)
T ss_dssp CTTSBCCCCCCBCTTSC-BCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG---------TEEEEEEECCSS
T ss_pred CCCCcCCceEEecCCCC-EEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CEEEEEEEecCC
Confidence 46899999999 99999 99999999999999999999999999999999999999875 799999999998
Q ss_pred HHHHHHHHhcCCCcccccCchhHHH--HHHhCCCCccceEEEECCCCcEEEe
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKE--LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~--l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.++++.+++++..++...|.... +.+.|+|.++|+++|+|++|+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 8899999998876557766665555 9999999999999999999999988
No 13
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.90 E-value=5.4e-23 Score=167.67 Aligned_cols=116 Identities=24% Similarity=0.442 Sum_probs=108.3
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
.|.++|+|.+ + +|+ .+++++++||++||+||++||++|+.++|.|.+++++|.++ ++.|++|++|.+.
T Consensus 5 ~G~~~P~f~l~~-~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~~ 73 (152)
T 3gl3_A 5 KGDKAPDFALPG-KTG-VVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK---------GFQVVAVNLDAKT 73 (152)
T ss_dssp TTSBCCCCEEEB-SSS-EEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG---------TEEEEEEECCSSH
T ss_pred CCCcCCceEeeC-CCC-eEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC---------CeEEEEEECCCCH
Confidence 6889999999 7 999 99999999999999999999999999999999999999875 7999999999999
Q ss_pred HHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 164 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++..+++ +.+++..|....+.+.|+|.++|+++|||++|+++.+
T Consensus 74 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 74 GDAMKFLAQVP-AEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp HHHHHHHHHSC-CCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHcC-CCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 99999999887 5777777777899999999999999999999999987
No 14
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.90 E-value=7.1e-23 Score=168.11 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=103.4
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
..|..+|+|.+ +.+|+ ++++++++||+++|+||++||++|+.++|.|.+++++|+++ +++|++|++|..
T Consensus 10 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~i~~d~~ 79 (152)
T 2lrt_A 10 IKEASIIDIQLKDLKGN-TRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ---------GFEIYQISLDGD 79 (152)
T ss_dssp SCTTCSCCCCEEBTTSC-EECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEECSCC
T ss_pred ccCCCCCCeEEEcCCCC-EEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC---------CeEEEEEEccCC
Confidence 35788999999 99999 99999999999999999999999999999999999999875 799999999999
Q ss_pred HHHHHHHHhcCCCcccccCchhHH---HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIK---ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~---~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.++++...++| |+..|... .+.+.|+|.++|+++|||++|+|+.+
T Consensus 80 ~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 80 EHFWKTSADNLPW---VCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp HHHHHHHHTTCSS---EEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEE
T ss_pred HHHHHHHHhCCCc---eEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEe
Confidence 8888888877554 44334333 59999999999999999999999998
No 15
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.89 E-value=6e-23 Score=168.61 Aligned_cols=117 Identities=14% Similarity=0.255 Sum_probs=103.0
Q ss_pred hcCCCCCeEe-e--CCCCceeeccccCCCEEEEEEecCCChhhHhh-hHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 85 LTNHDRGYLL-G--HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 85 ~g~~~pdf~l-~--~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.|.++|+|.+ + .+|+ .+++++++||++||+||++||++|+.+ +|.|.+++++|+++ ++.|++|++|
T Consensus 2 ~g~~aP~f~l~~~~~~g~-~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~---------~v~~v~v~~~ 71 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSAT-DLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED---------KVAVLGLHTV 71 (158)
T ss_dssp CCEECCCCCEEEEESCSS-CCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEECC
T ss_pred CCCcCCCceehhhhcCCC-ccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC---------CEEEEEEEec
Confidence 3778999999 6 4788 999999999999999999999999996 99999999999754 7999999985
Q ss_pred ------CCHHHHHHHHhcCCCcccccCchhHH-----HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 161 ------RDQTSFESYFGTMPWLALPFGDPTIK-----ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~p~~~d~~~-----~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.+.+++++++++ +.+|...|... .+.+.|+|.++|+++|||++|+|+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 72 FEHHEAMTPISLKAFLHEYR-IKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp CSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred ccccccCCHHHHHHHHHHcC-CCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 57789999999877 45676666544 79999999999999999999999987
No 16
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.89 E-value=1.4e-23 Score=172.68 Aligned_cols=119 Identities=14% Similarity=0.245 Sum_probs=105.4
Q ss_pred HHhcCCCCCeEe-e-CCCCceeeccccCCCEEEEEEecCCChhhHhh-hHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 83 NLLTNHDRGYLL-G-HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 83 ~~~g~~~pdf~l-~-~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.+.|.++|+|.+ + .+|+ .+++++++||++||+||++||++|+.+ +|.|.+++++|+++ ++.|++|++
T Consensus 3 ~~~g~~~p~~~~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~---------~v~~v~v~~ 72 (160)
T 3lor_A 3 SLDNAPLLELDVQEWVNHE-GLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES---------QVQVIGLHS 72 (160)
T ss_dssp -CTTCCBCCCCEEEESSSC-CCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEEC
T ss_pred ccCCCcCCCcccccccCCC-ccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC---------CcEEEEEec
Confidence 356899999999 6 8998 999999999999999999999999995 99999999999854 799999998
Q ss_pred C------CCHHHHHHHHhcCCCcccccCchhHHH------HHHhCCCCccceEEEECCCCcEEEe
Q 021505 160 D------RDQTSFESYFGTMPWLALPFGDPTIKE------LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 160 d------~~~~~~~~~~~~~~~~~~p~~~d~~~~------l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
| ++.+.++++.+.++ +.+|+..|.... +.+.|+|.++|+++|||++|+|+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 73 VFEHHDVMTPEALKVFIDEFG-IKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp CCSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred cccccccCCHHHHHHHHHHcC-CCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 4 67889999999887 457766665555 9999999999999999999999988
No 17
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.89 E-value=6.1e-23 Score=178.80 Aligned_cols=119 Identities=10% Similarity=0.151 Sum_probs=108.8
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCC-EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC--
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d-- 160 (311)
+|.++|+|.+ +.+|+ ++++++++|| +|||+||++||++|+.++|.|++++++|+++ +++||+|++|
T Consensus 34 ~G~~aP~f~l~~~~G~-~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Vs~d~~ 103 (218)
T 3u5r_E 34 LGTRAADFVLPDAGGN-LFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ---------GLAVVAINSNDA 103 (218)
T ss_dssp TTCBCCCCCEECTTCC-EECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT---------TEEEEEEECSCT
T ss_pred CCCcCCCcEeECCCCC-EEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCcc
Confidence 6899999999 99999 9999999999 5999999999999999999999999999865 7999999997
Q ss_pred -----CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEecc
Q 021505 161 -----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 214 (311)
Q Consensus 161 -----~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~g 214 (311)
++.+.++++.++++ +.+|+..|....+.+.|+|.++|+++|||++|+|+++..
T Consensus 104 ~~~~~d~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~ 161 (218)
T 3u5r_E 104 QAFPEETLERVGAEVKAYG-YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQ 161 (218)
T ss_dssp TTCGGGSHHHHHHHHHHHT-CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEEC
T ss_pred cccccCCHHHHHHHHHHhC-CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEecc
Confidence 67788999988777 578888887889999999999999999999999998743
No 18
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.89 E-value=4.6e-24 Score=176.59 Aligned_cols=117 Identities=25% Similarity=0.253 Sum_probs=98.4
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|+++|+|++ +.+|+ ++++++++||+++|+|| ++||++|..++|.|++++++++.+ ++++++||.|.
T Consensus 6 vG~~aPdF~l~~~~G~-~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~---------~~~~v~vs~d~- 74 (157)
T 4g2e_A 6 IGELAPDFELPDTELK-KVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV---------NAVVLGISVDP- 74 (157)
T ss_dssp TTSBCCCCEEEBTTSC-EEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC---------SSEEEEEESSC-
T ss_pred CCCCCcCeEeECCCCC-EEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccccc---------CceEeeecccc-
Confidence 6999999999 99999 99999999999999999 999999999999999999999865 89999999975
Q ss_pred HHHHHHHHhcCCCcccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
.+..+++.++++ +.+|+..|.+.++++.|||. ..|++||||++|+|+++.
T Consensus 75 ~~~~~~~~~~~~-~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~ 135 (157)
T 4g2e_A 75 PFSNKAFKEHNK-LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKW 135 (157)
T ss_dssp HHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEE
T ss_pred hhHHHHHHHHcC-CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEE
Confidence 556677777776 57888888889999999984 468999999999999873
No 19
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.89 E-value=7.4e-23 Score=165.60 Aligned_cols=119 Identities=19% Similarity=0.318 Sum_probs=106.9
Q ss_pred HhcCCCCCeEe-eCCCCceeecc--ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHH-HhhhhhcCCCCCCeEEEEEec
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~--~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.+|.++|+|.+ +.+|+ .++++ +++||++||+||++||++|+.++|.|.+++++| .++ ++.|++|++
T Consensus 6 ~~g~~~p~~~l~~~~g~-~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~---------~~~~v~v~~ 75 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGE-KLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK---------NFAMLGISL 75 (148)
T ss_dssp CTTSBCCCCCEEBTTSC-EECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT---------TEEEEEEEC
T ss_pred cCCCcCCCeEeeCCCCC-EEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC---------CeEEEEEEC
Confidence 36899999999 99999 99999 999999999999999999999999999999999 643 799999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCchh---HHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 160 DRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
|.+.+.++++...++ +.++...+. ...+.+.|+|.++|+++|+|++|+++.+.
T Consensus 76 d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 76 DIDREAWETAIKKDT-LSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp CSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred CCCHHHHHHHHHHcC-CCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 999999999998776 355554443 67999999999999999999999999883
No 20
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.89 E-value=5.1e-23 Score=170.36 Aligned_cols=118 Identities=16% Similarity=0.196 Sum_probs=107.2
Q ss_pred HhcCCCCCeE--e-eCCCCceeeccccCCCEEEEEEec-CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 84 LLTNHDRGYL--L-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 84 ~~g~~~pdf~--l-~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.+|.++|+|. + +.+|+ ++++++++||+++|+||+ +||++|..++|.|++++++|+++ +++||+|+.
T Consensus 8 ~~G~~~P~f~~~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~---------~~~vv~vs~ 77 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA---------GAKILGVSR 77 (163)
T ss_dssp CCCCCGGGGGCCEECSTTC-EECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT---------TCEEEEEES
T ss_pred ccCCcCCCccccccCCCCC-EEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC---------CCEEEEEeC
Confidence 3699999999 9 99999 999999999999999998 99999999999999999999975 799999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCc------------cceEEEECCCCcEEEec
Q 021505 160 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~------------~Pt~vlid~~G~iv~~~ 213 (311)
| +.+.+++|.++++ +.+|+..|....+.+.|++.. +|+++|||++|+|+...
T Consensus 78 d-~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 78 D-SVKSHDNFCAKQG-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp S-CHHHHHHHHHHHC-CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE
T ss_pred C-CHHHHHHHHHHhC-CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE
Confidence 8 6778888888766 668887787889999999987 99999999999999873
No 21
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.89 E-value=3.4e-22 Score=164.97 Aligned_cols=117 Identities=21% Similarity=0.376 Sum_probs=104.5
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
..|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ ++.|++|++|.+
T Consensus 9 ~~g~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~~v~v~~d~~ 78 (165)
T 3or5_A 9 ARPTPAPSFSGVTVDGK-PFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR---------GFTFVGIAVNEQ 78 (165)
T ss_dssp CCCCBCCCCEEECTTSC-EEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---------TEEEEEEECSCC
T ss_pred cCCCCCCCceeeCCCCC-EechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCC
Confidence 46889999999 99999 99999999999999999999999999999999999999864 799999999999
Q ss_pred HHHHHHHHhcCCCcccccCchhHHHHHHhC------CCCccceEEEECCCCcEEEe
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKELTKYF------DVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~------~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.++++...++ +.+|+..+.. .+.+.| ++.++|+++|||++|+|+.+
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 79 LPNVKNYMKTQG-IIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HHHHHHHHHHHT-CCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHcC-CCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 999999988766 4566655543 777887 89999999999999999987
No 22
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.88 E-value=1.1e-22 Score=165.92 Aligned_cols=118 Identities=20% Similarity=0.387 Sum_probs=107.5
Q ss_pred hcCCCC-CeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~p-df~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
.|.++| +|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.++++++.++ ++.|++|++|.+
T Consensus 5 ~G~~~p~~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 74 (152)
T 2lja_A 5 SGNPSAASFSYPDINGK-TVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK---------DIHFVSLSCDKN 74 (152)
T ss_dssp TTCCCSSSCEEEETTTE-EEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS---------SEEEEEEECCSC
T ss_pred cCCCCCcccEeecCCCC-EeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC---------CeEEEEEEccCc
Confidence 688999 9999 99999 99999999999999999999999999999999999998754 799999999999
Q ss_pred HHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.+.++..+.++...++..+....+.+.|+|.++|+++|+|++|+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 75 KKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred HHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 88999999877655556666667789999999999999999999999988
No 23
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.88 E-value=2.4e-22 Score=164.18 Aligned_cols=118 Identities=25% Similarity=0.470 Sum_probs=107.9
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
..|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.++++++.++ ++.|++|++|.+
T Consensus 3 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~ 72 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGE-VVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK---------PFRMLCVSIDEG 72 (154)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---------SEEEEEEECCTT
T ss_pred CCCCCCCCeEEEcCCCC-EEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEEcCCc
Confidence 46899999999 99999 99999999999999999999999999999999999999754 799999999987
Q ss_pred -HHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 163 -QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 -~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.++++...++ +.+|+..|....+.+.|+|.++|+++|||++|+++.+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 73 GKVAVEEFFRKTG-FTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp HHHHHHHHHHHHC-CCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred chHHHHHHHHHcC-CCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 778888888776 4677777778899999999999999999999999987
No 24
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.88 E-value=4.3e-22 Score=162.46 Aligned_cols=119 Identities=23% Similarity=0.306 Sum_probs=105.3
Q ss_pred HHhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 83 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
.++|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++.++ ++.|++|+.|.
T Consensus 2 ~~~G~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~ 71 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGK-TVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK---------NFQVLAVAQPI 71 (153)
T ss_dssp --CCTTCCSCEEECTTSC-EEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT---------TEEEEEEECTT
T ss_pred CCCCCCCCCcEeecCCCC-CccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CeEEEEEecCC
Confidence 357999999999 99999 99999999999999999999999999999999999999864 79999999864
Q ss_pred -CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 -DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 -~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++...++ +.+++..+....+.+.|+|.++|+++|||++|+++.+
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 122 (153)
T 2l5o_A 72 DPIESVRQYVKDYG-LPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKT 122 (153)
T ss_dssp SCHHHHHHHHHHTT-CCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEE
T ss_pred CCHHHHHHHHHHcC-CCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEE
Confidence 5678888888776 4567766667789999999999999999999999876
No 25
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.88 E-value=1.1e-23 Score=175.68 Aligned_cols=117 Identities=19% Similarity=0.282 Sum_probs=104.0
Q ss_pred hcCCCCCeEe-eCCCCceeecccc--CCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSL--VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~--~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
+|+++|+|++ +.+|+ +++++++ +||+++|+|| ++||++|..++|.|++++++|+++ ++++++||.|
T Consensus 7 vG~~aPdF~l~~~~G~-~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~---------~v~vv~is~d 76 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFE-PVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA---------NAEVLAISVD 76 (164)
T ss_dssp TTSBCCCCEEEBTTSC-EEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS---------SSEEEEEESS
T ss_pred CCCCCcCcEeECCCCC-EEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc---------CceEEEecCC
Confidence 6999999999 99999 9999998 8999999988 999999999999999999999865 8999999997
Q ss_pred CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCC----------ccceEEEECCCCcEEEec
Q 021505 161 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~----------~~Pt~vlid~~G~iv~~~ 213 (311)
. .+..+++..+++ +.+|+..|.+.++++.|||. ..|++||||++|+|++++
T Consensus 77 ~-~~~~~~~~~~~~-~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~ 137 (164)
T 4gqc_A 77 S-PWCLKKFKDENR-LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKW 137 (164)
T ss_dssp C-HHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEE
T ss_pred C-HHHHHHHHHhcC-cccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEE
Confidence 4 566777777766 67888888889999999984 468999999999999873
No 26
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.88 E-value=1.9e-22 Score=169.67 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=102.8
Q ss_pred HhcCCCCCeEe-eCCC--CceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 84 LLTNHDRGYLL-GHPP--DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g--~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+|.++|+|.+ +.+| + .+++++++||++||+||++||++|+.++|.|++++++ ++.|++|++|
T Consensus 31 ~~G~~~P~f~l~~~~g~~~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~vs~~ 96 (176)
T 3kh7_A 31 LIGKPFPAFDLPSVQDPAR-RLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-------------GVVIYGINYK 96 (176)
T ss_dssp TTTSBCCCCEEEBSSCTTS-EEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCEEEEEEES
T ss_pred ccCCcCCCcEecccCCCCc-eecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-------------CCEEEEEeCC
Confidence 47999999999 8888 7 8999999999999999999999999999999988764 4889999999
Q ss_pred CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 161 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.+.++++++++++....+..|....+.+.|+|.++|+++|||++|+|+.+
T Consensus 97 d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 97 DDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp CCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred CCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 9999999999988744333456667799999999999999999999999987
No 27
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.88 E-value=5.6e-22 Score=167.56 Aligned_cols=118 Identities=21% Similarity=0.378 Sum_probs=106.2
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC-
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD- 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~- 162 (311)
.|.++|+|.+ +.+|+ ++++++++||+++|+||++||++|+.++|.|.+++++|+++ +++|++|++|.+
T Consensus 36 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 105 (186)
T 1jfu_A 36 APLKLPDLAFEDADGK-PKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP---------NFEVVAINIDTRD 105 (186)
T ss_dssp SCCBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT---------TEEEEEEECCCSC
T ss_pred CCCcCCCcEeEcCCCC-EeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC---------CcEEEEEECCCCC
Confidence 5888999999 99999 99999999999999999999999999999999999999743 799999999975
Q ss_pred HHHHHHHHhcCCCcccccCchhHHHHHHhCCCC----ccceEEEECCCCcEEEe
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~----~~Pt~vlid~~G~iv~~ 212 (311)
.+.++++.++++...+|+..|....+.+.|++. ++|+++|||++|+|+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp TTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 567888888887656787777778899999986 89999999999999987
No 28
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.87 E-value=4.7e-22 Score=167.73 Aligned_cols=117 Identities=12% Similarity=0.131 Sum_probs=104.4
Q ss_pred hcCCCCCeEe-eC--CCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCe------EEE
Q 021505 85 LTNHDRGYLL-GH--PPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDF------EVV 155 (311)
Q Consensus 85 ~g~~~pdf~l-~~--~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~------~vv 155 (311)
.|.++|+|.+ +. +|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ ++ +|+
T Consensus 33 ~g~~~p~f~l~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~~~~~v~~v 102 (183)
T 3lwa_A 33 DRQQLPDIGGDSLMEEGT-QINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA---------GNGDTPGGTVL 102 (183)
T ss_dssp GCCCCCCCEEEBSSSTTC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC---------C---CCSEEEE
T ss_pred cCCCCCceeccccccCCc-EecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc---------CCCccCCcEEE
Confidence 4789999999 88 999 99999999999999999999999999999999999999875 56 999
Q ss_pred EEecCC-CHHHHHHHHhcCCCcccccCchhHHHHHHhC---CCCccceEEEECCCCcEEEe
Q 021505 156 FVSTDR-DQTSFESYFGTMPWLALPFGDPTIKELTKYF---DVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 156 ~Vs~d~-~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~---~v~~~Pt~vlid~~G~iv~~ 212 (311)
+|++|. +.+.++++.+.++ +.+|+..|....+.+.| ++.++|+++|||++|+|+.+
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 103 GINVRDYSRDIAQDFVTDNG-LDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp EEECSCCCHHHHHHHHHHTT-CCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred EEECCCCCHHHHHHHHHHcC-CCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 999998 7889999998877 55777667666777777 58999999999999999987
No 29
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.87 E-value=1.1e-21 Score=166.80 Aligned_cols=118 Identities=13% Similarity=0.192 Sum_probs=102.8
Q ss_pred hcCCCCCeEe-eC-CC--CceeeccccCCCEEEEEEec-CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 85 LTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 85 ~g~~~pdf~l-~~-~g--~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
+|.++|+|.+ +. +| + ++++++++||++||+||+ +||++|..++|.|++++++|+++ +++||+|+.
T Consensus 3 ~G~~aP~f~l~~~~~G~~~-~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~---------~v~vv~Is~ 72 (186)
T 1n8j_A 3 INTKIKPFKNQAFKNGEFI-EVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL---------GVDVYSVST 72 (186)
T ss_dssp TTCBCCCCEEEEEETTEEE-EEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT---------TEEEEEEES
T ss_pred CCCcCCCcEeecccCCcce-EEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC---------CCEEEEEEC
Confidence 6899999999 77 58 7 999999999999999995 99999999999999999999865 799999999
Q ss_pred CCCHHHHHHHHhcCC---CcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 160 DRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 160 d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
|. .+..++|.+.+. .+.+|+..|....+.+.|++. .+|++||||++|+|+.+.
T Consensus 73 d~-~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 73 DT-HFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIE 134 (186)
T ss_dssp SC-HHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CC-HHHHHHHHHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEE
Confidence 85 456677777662 256787777788999999997 479999999999999883
No 30
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.87 E-value=5.4e-22 Score=162.11 Aligned_cols=114 Identities=18% Similarity=0.305 Sum_probs=95.7
Q ss_pred CCCCCeEeeCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHH
Q 021505 87 NHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 166 (311)
Q Consensus 87 ~~~pdf~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~ 166 (311)
.++|+|.+..+|+ .+++++++||++||+||++||++|+.++|.|.+++++|+.+ +++|++|++|. .+.+
T Consensus 3 ~pa~~~~~~~~G~-~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d~-~~~~ 71 (151)
T 3raz_A 3 LSADELAGWKDNT-PQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG---------SVDMVGIALDT-SDNI 71 (151)
T ss_dssp ----CEEETTTCC-EECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---------TEEEEEEESSC-HHHH
T ss_pred CCcchhhcccCCC-EecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCC-hHHH
Confidence 4566777678999 99999999999999999999999999999999999998643 89999999975 5678
Q ss_pred HHHHhcCCCcccccCc---hhHHHHHHhCC--CCccceEEEECCCCcEEEe
Q 021505 167 ESYFGTMPWLALPFGD---PTIKELTKYFD--VQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 167 ~~~~~~~~~~~~p~~~---d~~~~l~~~~~--v~~~Pt~vlid~~G~iv~~ 212 (311)
.++.+.++ +.+|... +....+.+.|+ +.++|+++|||++|+++.+
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 72 GNFLKQTP-VSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp HHHHHHSC-CSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred HHHHHHcC-CCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 88888776 4555433 34678999999 9999999999999999988
No 31
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.87 E-value=6.2e-22 Score=157.31 Aligned_cols=114 Identities=25% Similarity=0.409 Sum_probs=103.3
Q ss_pred CCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe-----cCC
Q 021505 88 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS-----TDR 161 (311)
Q Consensus 88 ~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs-----~d~ 161 (311)
++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+++.|.++++++.. ++.+++|. .+.
T Consensus 1 ~~p~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~v~i~~~~~~~~~ 69 (138)
T 4evm_A 1 EVADFELMGVDGK-TYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD----------DYVVLTVVSPGHKGEQ 69 (138)
T ss_dssp CCCCCEEEBTTSC-EEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT----------TEEEEEEECTTSTTCC
T ss_pred CCCcceeECCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC----------CcEEEEEEcCCCCchh
Confidence 4799999 99999 9999999999999999999999999999999999988543 68999994 456
Q ss_pred CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.+.++.+.+++..+|+..+....+.+.|++.++|+++|+|++|+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 70 SEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp CHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred hHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 788999999999877888888878899999999999999999999999987
No 32
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.87 E-value=1.3e-21 Score=165.67 Aligned_cols=116 Identities=9% Similarity=0.138 Sum_probs=105.0
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC---
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD--- 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d--- 160 (311)
+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++|.+ . ++|++|++|
T Consensus 9 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~---------~-~~~v~v~~d~~~ 77 (188)
T 2cvb_A 9 LESPLIDAELPDPRGG-RYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG---------K-VAFVGINANDYE 77 (188)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT---------T-EEEEEEECCCTT
T ss_pred CCCCCCCceeecCCCC-EEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc---------C-eEEEEEEcCccc
Confidence 5889999999 99999 9999999999999999999999999999999999999874 2 999999996
Q ss_pred ----CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 161 ----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ----~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.+.++++.++++ +.+|+..|....+.+.|+|.++|+++|||++|+|+.+
T Consensus 78 ~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 78 KYPEDAPEKMAAFAEEHG-IFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp TCGGGSHHHHHHHHHHHT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred cccccCHHHHHHHHHHhC-CCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 46678888888776 5678777777899999999999999999999999988
No 33
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.87 E-value=1.5e-21 Score=157.07 Aligned_cols=118 Identities=20% Similarity=0.391 Sum_probs=105.6
Q ss_pred HHhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 83 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
..+|.++|+|.+ +.+|+ .+++++ +||+++|+||++||++|+.++|.|.+++++++.. ++.|++|++|.
T Consensus 9 ~~~g~~~p~~~l~~~~g~-~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~ 77 (145)
T 3erw_A 9 EKQPAVPAVFLMKTIEGE-DISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD---------SVKLVTVNLVN 77 (145)
T ss_dssp ---CCSCCEEEEECTTSC-EEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS---------SEEEEEEECGG
T ss_pred ccCCCcCCCceeecCCCC-EEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC---------CEEEEEEEccC
Confidence 347999999999 99999 999999 9999999999999999999999999999998743 79999999986
Q ss_pred ---CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 ---DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++.+.++ +.+|+..+....+.+.|+|.++|+++|+|++|+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (145)
T 3erw_A 78 SEQNQQVVEDFIKANK-LTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKT 130 (145)
T ss_dssp GSSCHHHHHHHHHHTT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEE
T ss_pred CcCCHHHHHHHHHHcC-CceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEE
Confidence 7889999998876 5678777777899999999999999999999999987
No 34
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.86 E-value=6.3e-22 Score=157.43 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=104.3
Q ss_pred cCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 86 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 86 g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++. ++.+++|++|.+.+
T Consensus 2 ~~~~p~~~~~~~~g~-~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~ 69 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGH-DFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-----------EVTFVGVAGLDQVP 69 (136)
T ss_dssp CCGGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHH
T ss_pred CCCCCCcccccCCCC-EeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-----------CeEEEEEeCCCCHH
Confidence 456899999 99999 999999999999999999999999999999999988775 48999999999999
Q ss_pred HHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 165 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 165 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.++++...++...+|+..+....+.+.|+|.++|+++|+|++|+++ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~ 116 (136)
T 1zzo_A 70 AMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-V 116 (136)
T ss_dssp HHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-E
T ss_pred HHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-E
Confidence 9999999888547887777778999999999999999999999998 5
No 35
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=9.9e-22 Score=161.85 Aligned_cols=114 Identities=18% Similarity=0.364 Sum_probs=101.8
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
.|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.++++++.+. ++.|++|+.|.+
T Consensus 17 ~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~- 85 (158)
T 3hdc_A 17 TGALAPNFKLPTLSGE-NKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG---------DLVVLAVNVEKR- 85 (158)
T ss_dssp TTSBCCCCEEECTTSC-EEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT---------SEEEEEEECSSS-
T ss_pred CCCcCCCceeEcCCCC-EEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC---------CeEEEEEeCCHH-
Confidence 5889999999 99999 99999999999999999999999999999999999999754 799999999884
Q ss_pred HHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 164 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.++.+.++ +.+++..|....+.+.|+|.++|+++|||++|+|+.+
T Consensus 86 --~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 131 (158)
T 3hdc_A 86 --FPEKYRRAP-VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQR 131 (158)
T ss_dssp --CCGGGGGCC-CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred --HHHHHHHcC-CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEE
Confidence 445555555 5677777777899999999999999999999999988
No 36
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.86 E-value=2e-21 Score=169.72 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=104.3
Q ss_pred HhcCCCCCeEe-eC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEE
Q 021505 84 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 156 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 156 (311)
.+|.++|+|.+ +. +| + +++++++ +||+|||+|| ++||++|..++|.|++++++|+++ +++||+
T Consensus 26 ~~G~~aP~F~l~~~~~~G~~~-~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~---------~v~vv~ 95 (221)
T 2c0d_A 26 LVTKKAYNFTAQGLNKNNEII-NVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK---------NVELLG 95 (221)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred CCCCCCCCeEEeccccCCCcc-EEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 47999999999 77 88 8 9999999 9999999999 999999999999999999999865 799999
Q ss_pred EecCCCHHHHHHHHhcCC------CcccccCchhHHHHHHhCCC-----CccceEEEECCCCcEEEec
Q 021505 157 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDV-----QGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 157 Vs~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v-----~~~Pt~vlid~~G~iv~~~ 213 (311)
|++|. .+..++|.+.+. .+.+|+..|....+++.|++ ..+|++||||++|+|+.+.
T Consensus 96 Is~D~-~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 96 ISVDS-VYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp EESSC-HHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred EeCCC-HHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 99975 445666776651 46778888877899999999 4799999999999999883
No 37
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.86 E-value=2.8e-22 Score=169.26 Aligned_cols=116 Identities=19% Similarity=0.134 Sum_probs=101.5
Q ss_pred cCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 86 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 86 g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
|.++|+|.+ +.+|+ ++++++++||++||+|| ++||++|..++|.|++++++|+++ +++||+|+.|. .
T Consensus 28 g~~aP~f~l~~~~G~-~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~---------~~~vv~Vs~D~-~ 96 (179)
T 3ixr_A 28 NHSLLNHPLMLSGST-CKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI---------NATVLGVSRDS-V 96 (179)
T ss_dssp CHHHHHCCEEEGGGE-EECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESCC-H
T ss_pred CCcCCCeeEECCCCC-EEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEcCCC-H
Confidence 333999999 99999 99999999999999998 999999999999999999999865 89999999985 5
Q ss_pred HHHHHHHhcCCCcccccCchhHHHHHHhCCCCc------------cceEEEECCCCcEEEec
Q 021505 164 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~------------~Pt~vlid~~G~iv~~~ 213 (311)
+..+++.++++ +.+|+..|....+++.|++.. +|++||||++|+|+...
T Consensus 97 ~~~~~~~~~~~-~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~ 157 (179)
T 3ixr_A 97 KSHDSFCAKQG-FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW 157 (179)
T ss_dssp HHHHHHHHHHT-CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHcC-CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE
Confidence 56777777665 677888787889999999953 68999999999999873
No 38
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.86 E-value=6.6e-22 Score=159.78 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=104.9
Q ss_pred hcCCCCCeEe---eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 85 LTNHDRGYLL---GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 85 ~g~~~pdf~l---~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++.+ .+.|++|++|.
T Consensus 3 ~g~~~P~f~~~~~~~~g~-~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~----------~~~~~~v~~~~ 71 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGE-VTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD----------QLNVVAVHMPR 71 (148)
T ss_dssp TTCBCCCCCCCSEEESCC-CCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TSEEEEEECCC
T ss_pred CCCCCCCCccccccccCc-ccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC----------CcEEEEEEcCC
Confidence 6889999987 67899 9999999999999999999999999999999999999874 28999999986
Q ss_pred -----CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 -----DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 -----~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++..+++ +.+|+..+....+.+.|+|.++|+++|+|++|+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 72 SEDDLDPGKIKETAAEHD-ITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp STTTSSHHHHHHHHHHTT-CCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred CccccCHHHHHHHHHHcC-CCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 6788999998887 5777777777899999999999999999999999987
No 39
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.86 E-value=2.6e-21 Score=159.63 Aligned_cols=119 Identities=18% Similarity=0.370 Sum_probs=101.3
Q ss_pred CCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChh-hHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---C
Q 021505 88 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---D 162 (311)
Q Consensus 88 ~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~ 162 (311)
.+|+|.+ +.+|+ ++++++++||++||+||++||++ |+.++|.|+++++++++. .+..+++|++|++|. +
T Consensus 2 ~ap~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-----~~~~~~~vv~vs~d~~~d~ 75 (164)
T 2ggt_A 2 LGGPFSLTTHTGE-RKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI-----TTLPDLTPLFISIDPERDT 75 (164)
T ss_dssp CCCCCEEEETTSC-EEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS-----SSSCCEEEEEEESCTTTCC
T ss_pred CCCCeEEEeCCCC-EEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc-----cCCCcEEEEEEEeCCCCCC
Confidence 4799999 99999 99999999999999999999998 999999999999999851 001379999999986 3
Q ss_pred HHHHHHHHhcCCCcccccC---chhHHHHHHhCCCCccc---------------eEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFG---DPTIKELTKYFDVQGIP---------------CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~---~d~~~~l~~~~~v~~~P---------------t~vlid~~G~iv~~~ 213 (311)
.+.+++|.+.++ ..+++. .+....+.+.|+|..+| +++|||++|+|+.+.
T Consensus 76 ~~~~~~~~~~~~-~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~ 143 (164)
T 2ggt_A 76 KEAIANYVKEFS-PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYF 143 (164)
T ss_dssp HHHHHHHHHTTC-SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcC-CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEe
Confidence 678888888765 344443 45567899999999999 899999999999873
No 40
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.86 E-value=3.9e-21 Score=165.24 Aligned_cols=119 Identities=18% Similarity=0.179 Sum_probs=104.4
Q ss_pred HhcCCCCCeEe-eC--CC--CceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 84 LLTNHDRGYLL-GH--PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
.+|.++|+|.+ +. +| + ++++++++||++||+|| ++||++|..++|.|.+++++|+++ +++||+|
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~-~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~vi~I 76 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFK-KVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI---------GCEVLAC 76 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred cCCCcCCCcEeeeeecCCCcc-EEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 36899999999 65 67 7 99999999999999999 999999999999999999999864 7999999
Q ss_pred ecCCCHHHHHHHHhcC----C--CcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 158 STDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
++|. .+...++.+.+ + .+.+|+..|...++++.|++. ++|+++|||++|+|+.+.
T Consensus 77 s~D~-~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~ 143 (202)
T 1uul_A 77 SMDS-EYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQIT 143 (202)
T ss_dssp ESSC-HHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred eCCC-HHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEE
Confidence 9985 45667777655 1 367888878778999999999 999999999999999883
No 41
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.86 E-value=2.1e-21 Score=165.39 Aligned_cols=118 Identities=17% Similarity=0.211 Sum_probs=105.0
Q ss_pred hcCCCCCeEe-eC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 85 LTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 85 ~g~~~pdf~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
+|.++|+|.+ +. +| + .++++++ +||++||+|| ++||++|..++|.|.+++++|+++ +++||+|
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~I 71 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFG-EVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER---------NVELLGC 71 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCCcEeEeeecCCcee-EEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 5889999999 77 89 8 9999999 9999999999 999999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcCC------CcccccCchhHHHHHHhCCCC-----ccceEEEECCCCcEEEec
Q 021505 158 STDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v~-----~~Pt~vlid~~G~iv~~~ 213 (311)
++|. .+..+++.+.+. .+.+|+..|....+.+.|++. .+|+++|||++|+|+.+.
T Consensus 72 s~d~-~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 72 SVDS-KFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp ESSC-HHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred EeCC-HHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 9985 556777777651 467888888778999999999 899999999999999883
No 42
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.86 E-value=5.9e-21 Score=163.38 Aligned_cols=117 Identities=18% Similarity=0.194 Sum_probs=103.1
Q ss_pred hcCCCCCeEe-eC-CC--CceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 85 LTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 85 ~g~~~pdf~l-~~-~g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
+|.++|+|.+ +. +| + ++++++++||++||+|| ++||++|..++|.|.+++++|+++ +++||+|++
T Consensus 7 ~G~~aP~f~l~~~~~g~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Is~ 76 (197)
T 1qmv_A 7 IGKPAPDFKATAVVDGAFK-EVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL---------GCEVLGVSV 76 (197)
T ss_dssp TTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEES
T ss_pred CCCCCCCeEeEeecCCCcc-EEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEEC
Confidence 6899999999 66 77 8 99999999999999999 999999999999999999999864 799999999
Q ss_pred CCCHHHHHHHHhcC------CCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEe
Q 021505 160 DRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 160 d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~ 212 (311)
|.. +...++.+.+ ..+.+|+..|...++++.|++. ++|+++|||++|+|+.+
T Consensus 77 d~~-~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 77 DSQ-FTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp SCH-HHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCH-HHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 863 4556666654 1467888778778999999998 89999999999999988
No 43
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.86 E-value=3.2e-21 Score=167.53 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=105.8
Q ss_pred HhcCCCCCeEe-eC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEE
Q 021505 84 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 156 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 156 (311)
.+|.++|+|.+ +. +| + +++++++ +||++||+|| ++||++|..++|.|.+++++|+++ +++||+
T Consensus 22 ~~G~~aP~f~l~~~~~~G~~~-~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~ 91 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGDNSFG-EVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER---------NVELLG 91 (213)
T ss_dssp CBTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred cCCCcCCCeEeeccccCCcee-EEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 47999999999 77 88 7 9999999 9999999999 999999999999999999999865 799999
Q ss_pred EecCCCHHHHHHHHhcCC------CcccccCchhHHHHHHhCCCC-----ccceEEEECCCCcEEEec
Q 021505 157 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 157 Vs~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v~-----~~Pt~vlid~~G~iv~~~ 213 (311)
|++|. .+..+++.+... .+.+|+..|...++++.|++. .+|++||||++|+|+.+.
T Consensus 92 Is~D~-~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 92 CSVDS-KYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp EESSC-HHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred EeCCC-HHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEE
Confidence 99984 556777777651 467888888788999999999 899999999999999883
No 44
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.86 E-value=1.2e-21 Score=162.20 Aligned_cols=116 Identities=16% Similarity=0.283 Sum_probs=106.5
Q ss_pred HHhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-
Q 021505 83 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 160 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d- 160 (311)
..+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++++ ++.|++|++|
T Consensus 11 ~~~g~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-----------~v~vv~i~~d~ 78 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGE-VISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-----------EISVIAIDFWT 78 (165)
T ss_dssp HHHHHHHHCCCEEBTTSC-EECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEECCS
T ss_pred ccccCcCCCCEeecCCCC-EeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-----------CcEEEEEEecc
Confidence 456888999999 99999 999999999999999999999999999999999999875 5899999999
Q ss_pred -----------------CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEE
Q 021505 161 -----------------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 161 -----------------~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
.+.+.++++.+++++..+|+..+ ...+.+.|+|.++|+++|||++|+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 79 AEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred cccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 78899999999887557887777 789999999999999999999999998
No 45
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.86 E-value=5.3e-21 Score=167.07 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=102.3
Q ss_pred HHhcCCCCCeEe-eC-C--CCceeeccccCCCEEEEEEec-CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 83 NLLTNHDRGYLL-GH-P--PDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~-~--g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
-.+|.++|+|.+ +. + |+ ++++++++||++||+||+ +||++|..++|.|++++++|+++ +++||+|
T Consensus 40 l~~G~~aP~f~l~~~~d~~G~-~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~---------~v~vv~I 109 (222)
T 3ztl_A 40 LLPNRPAPEFKGQAVINGEFK-EICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR---------NCQVIAC 109 (222)
T ss_dssp CCSSEECCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred ccCCCCCCCeEEecccCCCCc-EEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 347999999999 54 4 48 999999999999999997 99999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcC------CCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 158 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
++|.. +...++.+.+ ..+.+|+..|....+.+.|++. .+|++||||++|+|+.+.
T Consensus 110 s~D~~-~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~ 176 (222)
T 3ztl_A 110 STDSQ-YSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQIT 176 (222)
T ss_dssp ESSCH-HHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEE
T ss_pred ECCCH-HHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEE
Confidence 99863 3444454433 2477888888788999999998 899999999999999883
No 46
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.86 E-value=4.3e-21 Score=156.83 Aligned_cols=113 Identities=22% Similarity=0.368 Sum_probs=103.1
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec--CC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST--DR 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~--d~ 161 (311)
.|.++|+|.+ +.+|+ .+++++++ |++||+||++||++|+.++|.|.++++++ . +.|++|++ ++
T Consensus 7 ~g~~~p~f~l~~~~g~-~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~----------v~~v~v~~d~~~ 72 (154)
T 3ia1_A 7 PGEPLPDFLLLDPKGQ-PVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G----------VPFYVISREPRD 72 (154)
T ss_dssp SBEECCCCCEECTTSC-EECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C----------CCEEEEECCTTC
T ss_pred CCCcCCceEEECCCCC-EechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C----------CeEEEEeCCCcc
Confidence 5889999999 99999 99999999 99999999999999999999999999988 3 67999999 57
Q ss_pred CHHHHHHHHhcCCCcccccCch---hHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGDP---TIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d---~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++.+.++ +.+|+..+ ....+.+.|+|.++|+++|||++|+++.+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 73 TREVVLEYMKTYP-RFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp CHHHHHHHHTTCT-TEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEE
T ss_pred cHHHHHHHHHHcC-CCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEE
Confidence 7889999999887 46777665 67899999999999999999999999987
No 47
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.86 E-value=3.3e-21 Score=160.64 Aligned_cols=119 Identities=18% Similarity=0.285 Sum_probs=100.6
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCCh-hhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC--
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d-- 160 (311)
+|.++|+|.+ +.+|+ .+++++++||++||+||++||+ +|..+++.|.+++++|.++ +.+++||+|++|
T Consensus 9 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-------~~~~~vv~is~d~~ 80 (174)
T 1xzo_A 9 LNYEVEPFTFQNQDGK-NVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-------NIDVRIISFSVDPE 80 (174)
T ss_dssp CCEECCCCEEECTTSC-EEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT-------TCCCEEEEEESCTT
T ss_pred cccccCCcEEEcCCCC-EEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhc-------CCcEEEEEEEeCCC
Confidence 6888999999 99999 9999999999999999999999 9999999999999999875 335999999999
Q ss_pred -CCHHHHHHHHhcCCCccc---ccCchhHHHHHHh----------------CCCCccceEEEECCCCcEEEe
Q 021505 161 -RDQTSFESYFGTMPWLAL---PFGDPTIKELTKY----------------FDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~---p~~~d~~~~l~~~----------------~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.+.++++.++++ +.+ ++..+.+.++.+. |++..+|+++|||++|+|+.+
T Consensus 81 ~d~~~~~~~~~~~~~-~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 81 NDKPKQLKKFAANYP-LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp TCCHHHHHHHHTTSC-CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred CCCHHHHHHHHHHcC-CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 46788899988776 334 6555544444433 456789999999999999987
No 48
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.77 E-value=2.1e-23 Score=168.17 Aligned_cols=123 Identities=33% Similarity=0.693 Sum_probs=108.7
Q ss_pred CCCCeEe-eCCCCceeeccc-cCCC-EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 88 HDRGYLL-GHPPDEKVPVSS-LVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 88 ~~pdf~l-~~~g~~~v~l~~-~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
.+|+|.+ +.+|+ .+++++ ++|| +++|+||++||++|+.++|.|.+++++++++ ..++.|++|++|.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~v~~v~~d~~~~ 74 (143)
T 2lus_A 3 FIQGIKLVKKNRC-EVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDD-------SAPFEIIFVSSDRSED 74 (143)
Confidence 4689999 99999 999999 9999 9999999999999999999999999999643 3479999999998888
Q ss_pred HHHHHHhcC--CCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEeccchhh
Q 021505 165 SFESYFGTM--PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLI 218 (311)
Q Consensus 165 ~~~~~~~~~--~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~g~~~~ 218 (311)
.++++++++ +|..+++..+....+++.|+|.++|+++|||++|+++.++|+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~ 130 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEV 130 (143)
Confidence 899988866 577778777777899999999999999999999999999775543
No 49
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.86 E-value=6.2e-21 Score=165.43 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=103.0
Q ss_pred HhcCCCCCeEe-eC---CCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL-GH---PPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l-~~---~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ +. +|+ ++++++++||++||+|| ++||++|..++|.|++++++|+++ +++||+||
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~---------~v~vv~Is 89 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 89 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCcCCCeEeecccCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47899999999 53 457 99999999999999999 999999999999999999999865 89999999
Q ss_pred cCCCHHHHHHHHhcC----C--CcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
+|. .+..++|.+.+ + .+.+|+..|....+++.|++. .+|++||||++|+|+...
T Consensus 90 ~D~-~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 90 VDS-QFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp SSC-HHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CCC-HHHHHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 975 45567777655 1 467888878778999999994 699999999999999883
No 50
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.86 E-value=2.2e-21 Score=159.88 Aligned_cols=118 Identities=13% Similarity=0.184 Sum_probs=104.7
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCC-EEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+|.++|+|.+ +.+|+ .+++++++|| +++|+|| ++||++|+.++|.|.+++++|.++ +++|++|++|
T Consensus 10 ~~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~~~vv~is~d 79 (160)
T 1xvw_A 10 NVGATAPDFTLRDQNQQ-LVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND---------DSAALAISVG 79 (160)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS---------SEEEEEEESC
T ss_pred CCCCCCCCeEeEcCCCC-EEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CcEEEEEeCC
Confidence 36899999999 99999 9999999998 9999998 999999999999999999988753 7999999998
Q ss_pred CCHHHHHHHHhcCCCcccccCchh--HHHHHHhCCCC----ccc--eEEEECCCCcEEEec
Q 021505 161 RDQTSFESYFGTMPWLALPFGDPT--IKELTKYFDVQ----GIP--CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~d~--~~~l~~~~~v~----~~P--t~vlid~~G~iv~~~ 213 (311)
+.+..+++.+++++ .+|+..|. ...+.+.|++. ++| +++|||++|+|+.+.
T Consensus 80 -~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~ 138 (160)
T 1xvw_A 80 -PPPTHKIWATQSGF-TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAE 138 (160)
T ss_dssp -CHHHHHHHHHHHTC-CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEE
T ss_pred -CHHHHHHHHHhcCC-CceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEE
Confidence 45678888887774 67777774 77899999998 999 999999999999883
No 51
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.86 E-value=3.7e-21 Score=164.37 Aligned_cols=117 Identities=15% Similarity=0.188 Sum_probs=103.2
Q ss_pred hcCCCCCeEe-eCC-------------C--CceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCC
Q 021505 85 LTNHDRGYLL-GHP-------------P--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGD 147 (311)
Q Consensus 85 ~g~~~pdf~l-~~~-------------g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~ 147 (311)
+|.++|+|.+ +.+ | + ++++++++||++||+|| ++||++|+.++|.|.+++++|.++
T Consensus 6 ~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------ 78 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFT-TITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------ 78 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEE-EEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------
T ss_pred CCCcCCCcCcccccccccccccccccCCCcc-EeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------
Confidence 6889999999 766 6 7 99999999999999999 999999999999999999999864
Q ss_pred CCCCeEEEEEecCCCHHHHHHHHhcCC---CcccccCchhHHHHHHhCCCC-----ccceEEEECCCCcEEEe
Q 021505 148 ALEDFEVVFVSTDRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 148 ~~~~~~vv~Vs~d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~-----~~Pt~vlid~~G~iv~~ 212 (311)
+++||+|++|. .+..+++.+.+. .+.+|+..|....+.+.|++. ++|+++|||++|+|+.+
T Consensus 79 ---~v~vv~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 79 ---DAQILGVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp ---TEEEEEEESSC-HHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred ---CCEEEEEECCC-HHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 79999999986 556777777661 256777777778999999999 99999999999999998
No 52
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.86 E-value=2e-21 Score=161.12 Aligned_cols=117 Identities=9% Similarity=0.097 Sum_probs=93.9
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~-- 161 (311)
.|.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|++++++|.++ +++|++|++|.
T Consensus 7 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 76 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGV-DVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK---------GLRILAFPCNQFG 76 (169)
T ss_dssp CCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCST
T ss_pred CCcccccceeecCCCC-CccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECCccC
Confidence 6889999999 99999 99999999999999999999999999999999999999875 79999999973
Q ss_pred -----CHHHHHHH-HhcCCCcccccCc--hhHHH----HH-----HhCC-----CCccceEEEECCCCcEEEe
Q 021505 162 -----DQTSFESY-FGTMPWLALPFGD--PTIKE----LT-----KYFD-----VQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 -----~~~~~~~~-~~~~~~~~~p~~~--d~~~~----l~-----~~~~-----v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++ ..+++ +.+|+.. |.... +. ..++ |..+|+++|||++|+|+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 77 GQEPWAEAEIKKFVTEKYG-VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp TCCCSCHHHHHHHHHHHHC-CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCHHHHHHHHHHhcC-CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 45677777 35544 3445432 21111 11 1235 5567999999999999988
No 53
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.86 E-value=4.9e-21 Score=162.36 Aligned_cols=119 Identities=19% Similarity=0.252 Sum_probs=103.7
Q ss_pred hcCCCCCeEe-eCCCC---ceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 85 LTNHDRGYLL-GHPPD---EKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~---~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
+|.++|+|.+ +.+|+ +++++++++||++||+|| ++||++|+.++|.|.+++++|+++ +++|++|++
T Consensus 3 ~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~ 73 (187)
T 1we0_A 3 IGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL---------GVEVYSVST 73 (187)
T ss_dssp TTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT---------TEEEEEEES
T ss_pred CCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc---------CCEEEEEEC
Confidence 6889999999 76665 279999999999999999 999999999999999999999875 799999999
Q ss_pred CCCHHHHHHHHhcCC---CcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 160 DRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 160 d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
|. .+..+++.+.+. .+.+|+..|....+++.|++. ++|+++|||++|+|+.+.
T Consensus 74 d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~ 135 (187)
T 1we0_A 74 DT-HFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIE 135 (187)
T ss_dssp SC-HHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CC-HHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEE
Confidence 86 456777777662 356777777778999999998 999999999999999883
No 54
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.85 E-value=2.1e-21 Score=161.14 Aligned_cols=118 Identities=13% Similarity=0.216 Sum_probs=95.2
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
..|.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|++++++|+++ +++|++|++|.
T Consensus 7 ~~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~ 76 (170)
T 2p5q_A 7 KNPESVHDFTVKDAKEN-DVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ---------GLEILAFPCNQF 76 (170)
T ss_dssp ---CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTT
T ss_pred CCCccccceEEEcCCCC-EecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC---------CEEEEEEECCCC
Confidence 36889999999 99999 99999999999999999999999999999999999999875 79999999973
Q ss_pred ------CHHHHHHHHh-cCCCcccccC--chhHH----HHH-----HhCCC--Cccc---eEEEECCCCcEEEe
Q 021505 162 ------DQTSFESYFG-TMPWLALPFG--DPTIK----ELT-----KYFDV--QGIP---CLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ------~~~~~~~~~~-~~~~~~~p~~--~d~~~----~l~-----~~~~v--~~~P---t~vlid~~G~iv~~ 212 (311)
+.+.++++.+ .++ +.+|+. .|... .+. +.+++ .++| +++|||++|+|+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 77 GEEEPGTNDQITDFVCTRFK-SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp TTCCCSCHHHHHHHHHHHTC-CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcC-CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 5778888887 544 445554 22221 122 23466 7788 99999999999988
No 55
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.85 E-value=1.2e-20 Score=156.78 Aligned_cols=118 Identities=17% Similarity=0.296 Sum_probs=99.5
Q ss_pred CC-CCeEe-eCCCCceeeccccCCCEEEEEEecCCChh-hHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---
Q 021505 88 HD-RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR--- 161 (311)
Q Consensus 88 ~~-pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~--- 161 (311)
.+ |+|.+ +.+|+ ++++++++||++||+||++||++ |+.++|.|++++++|.+. ....+++||+|++|.
T Consensus 4 ~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~-----~~~~~v~vv~is~d~~~d 77 (171)
T 2rli_A 4 TGQGDFHLLDHRGR-ARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAE-----PGLPPVQPVFITVDPERD 77 (171)
T ss_dssp CCCSCCEEEETTSC-EEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHS-----TTSCCEEEEEEESCSTTC
T ss_pred CCCCCeEEEeCCCC-EEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhc-----cCCCceEEEEEEECCCCC
Confidence 35 89999 99999 99999999999999999999998 999999999999999751 002479999999994
Q ss_pred CHHHHHHHHhcCCCcccccCc---hhHHHHHHhCCCCccc---------------eEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGD---PTIKELTKYFDVQGIP---------------CLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~---d~~~~l~~~~~v~~~P---------------t~vlid~~G~iv~~ 212 (311)
+.+.++++.++++ ..+++.. +....+++.|+|..+| +++|||++|+|+.+
T Consensus 78 ~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 78 DVEAMARYVQDFH-PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp CHHHHHHHHHTTC-TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHcC-CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 5778888888765 3444433 3456899999999888 99999999999987
No 56
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.85 E-value=2.6e-21 Score=163.14 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=104.5
Q ss_pred HHHhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 82 INLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 82 ~~~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+..|..+|+|.+ +.+|+ .+++++++||+|||+|||+||++|+.++|.|.+++++|+++ +++||+|++|
T Consensus 11 ~~~~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~d 80 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGR-TVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS---------HFSVLAFPCN 80 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT---------SEEEEEEECC
T ss_pred hcCCcCcccceEEecCCCC-EecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC---------CeEEEEEECC
Confidence 3456889999999 99999 99999999999999999999999999999999999999865 7999999987
Q ss_pred C-------CHHHHHHHHhc-CCCcccccCc-----hhHH-HHHHhC--CCCccce----EEEECCCCcEEEeccchhhhc
Q 021505 161 R-------DQTSFESYFGT-MPWLALPFGD-----PTIK-ELTKYF--DVQGIPC----LVIIGPEGKTVTKQGRNLINL 220 (311)
Q Consensus 161 ~-------~~~~~~~~~~~-~~~~~~p~~~-----d~~~-~l~~~~--~v~~~Pt----~vlid~~G~iv~~~g~~~~~~ 220 (311)
. +.+.++++.+. ++ +.+|+.. +... .+...+ .+.++|+ +||||++|+|+.+.
T Consensus 81 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~------- 152 (180)
T 3kij_A 81 QFGESEPRPSKEVESFARKNYG-VTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFW------- 152 (180)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEE-------
T ss_pred ccccCCCCCHHHHHHHHHHhcC-CCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEE-------
Confidence 5 77888888887 54 4444421 1111 111111 1346888 99999999999883
Q ss_pred ccccCCCCcHHHHHHHHHHH
Q 021505 221 YQENAYPFTEAKLEFLEKQM 240 (311)
Q Consensus 221 ~g~~~~p~~~~~i~~L~~~~ 240 (311)
.|........+.|+++++++
T Consensus 153 ~g~~~~~~l~~~i~~lL~~~ 172 (180)
T 3kij_A 153 RPEEPIEVIRPDIAALVRQV 172 (180)
T ss_dssp CTTCCGGGTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 33333223344555554443
No 57
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.85 E-value=6.8e-21 Score=163.01 Aligned_cols=119 Identities=16% Similarity=0.191 Sum_probs=103.9
Q ss_pred hcCCCCCeEe-eC--CCC--ceeecccc-CCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 85 LTNHDRGYLL-GH--PPD--EKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 85 ~g~~~pdf~l-~~--~g~--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
+|.++|+|.+ +. +|+ ++++++++ +||+++|+|| ++||++|+.++|.|.+++++|+++ +++|++|
T Consensus 3 ~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~I 73 (198)
T 1zof_A 3 VTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK---------GFNVIGV 73 (198)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEE
Confidence 6889999999 76 674 37999999 9999999999 999999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcC------CCcccccCchhHHHHHHhCCCC-----ccceEEEECCCCcEEEec
Q 021505 158 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~-----~~Pt~vlid~~G~iv~~~ 213 (311)
++|. .+..++|.+.+ ..+.+|+..|....+.+.|++. ++|+++|||++|+|+.+.
T Consensus 74 s~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 74 SIDS-EQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp ESSC-HHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred ECCC-HHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 9986 56677777761 2356787777778999999999 999999999999999883
No 58
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.85 E-value=1.4e-21 Score=155.69 Aligned_cols=111 Identities=18% Similarity=0.245 Sum_probs=101.8
Q ss_pred CCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHH
Q 021505 88 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 166 (311)
Q Consensus 88 ~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~ 166 (311)
++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++. ++.+++|++|.+.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~~~ 70 (136)
T 1lu4_A 3 ERLQFTATTLSGA-PFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-----------AVTFVGIATRADVGAM 70 (136)
T ss_dssp GGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHHHH
T ss_pred CCCCeEeecCCCC-eecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-----------CcEEEEEEcCCCHHHH
Confidence 5789999 99999 999999999999999999999999999999999988875 4899999999999999
Q ss_pred HHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 167 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 167 ~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++..+++ +.+|...|....+.+.|++.++|+++|+|++|+++ +
T Consensus 71 ~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~ 114 (136)
T 1lu4_A 71 QSFVSKYN-LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-F 114 (136)
T ss_dssp HHHHHHHT-CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-E
T ss_pred HHHHHHcC-CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-E
Confidence 99999877 46777777778999999999999999999999998 5
No 59
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.85 E-value=5.6e-21 Score=162.59 Aligned_cols=118 Identities=13% Similarity=0.204 Sum_probs=105.7
Q ss_pred hcCCCCCeEe--eCCCCceeeccccCCC-EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-
Q 021505 85 LTNHDRGYLL--GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 160 (311)
Q Consensus 85 ~g~~~pdf~l--~~~g~~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d- 160 (311)
+|..+|+|.+ +.+|+ .+++++++|| ++||+||++||++|+.++|.|.+++++|.++ +++|++|++|
T Consensus 20 ~g~~~p~f~l~~~~~G~-~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d~ 89 (196)
T 2ywi_A 20 LGKQAPPFALTNVIDGN-VVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK---------GVSFVAINSND 89 (196)
T ss_dssp TTCBCCCCEEEETTTCC-EEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEECSC
T ss_pred cCCcCCceeeeecCCCC-EEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCc
Confidence 5888999998 58898 9999999998 5999999999999999999999999999875 7999999997
Q ss_pred ------CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 161 ------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
++.+.++++.++++ +.+|+..|....+.+.|+|.++|+++|||++|+|+.+.
T Consensus 90 ~~~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 147 (196)
T 2ywi_A 90 AEQYPEDSPENMKKVAEELG-YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRG 147 (196)
T ss_dssp TTTCGGGSHHHHHHHHHHHT-CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEE
T ss_pred cccccccCHHHHHHHHHHcC-CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEcc
Confidence 46778888888776 56777777778999999999999999999999999873
No 60
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.85 E-value=4.7e-21 Score=159.00 Aligned_cols=116 Identities=9% Similarity=0.048 Sum_probs=100.3
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEec-CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||+++|+||+ +||++|..++|.|++++++| + +++|++|+.|.
T Consensus 18 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~---------~v~vv~is~d~- 84 (163)
T 1psq_A 18 VGDKALDFSLTTTDLS-KKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D---------NTVVLTVSMDL- 84 (163)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESSC-
T ss_pred CCCCCCCEEEEcCCCc-EeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CcEEEEEECCC-
Confidence 5889999999 99999 999999999999999995 99999999999999999888 3 69999999985
Q ss_pred HHHHHHHHhcCCCcccccCch-hHHHHHHhCCCC----c--cceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQ----G--IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d-~~~~l~~~~~v~----~--~Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.+.++...+|+..| ....+.+.|++. + .|+++|||++|+|+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 85 PFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp HHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 456677777665226787777 678999999997 3 49999999999999883
No 61
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.85 E-value=4.8e-22 Score=168.89 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=97.0
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC---
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD--- 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d--- 160 (311)
.+.++|+|.+ +.+|+ ++++++++||+|||+|||+||++|+.++|.|++++++|+++ +++||+|++|
T Consensus 22 ~~~~~p~f~l~d~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~d~~~ 91 (187)
T 3dwv_A 22 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPSNQFG 91 (187)
T ss_dssp TCCSGGGSCCBBTTSC-BCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG---------TCEEEEEEBCCCS
T ss_pred CCCccCCeEEEcCCCC-EeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC---------CeEEEEEECcccC
Confidence 3678899999 99999 99999999999999999999999999999999999999876 7999999998
Q ss_pred ----CCHHHHHHHHhcCCCcccccCc--hhHH----HHH--------HhCCCCccc---eEEEECCCCcEEEe
Q 021505 161 ----RDQTSFESYFGTMPWLALPFGD--PTIK----ELT--------KYFDVQGIP---CLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ----~~~~~~~~~~~~~~~~~~p~~~--d~~~----~l~--------~~~~v~~~P---t~vlid~~G~iv~~ 212 (311)
.+.+.+++++++.-.+.+|+.. |... .+. ..|++..+| ++||||++|+|+.+
T Consensus 92 ~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 92 GQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp SCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 3567888888844225566543 2111 121 445777888 99999999999988
No 62
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.85 E-value=1.1e-21 Score=161.86 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=102.0
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCC--EEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk--~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
+|.++|+|.+ +.+|+ ++++++++|| ++||+|| ++||++|..++|.|.+++++|+++ + +||+|+.|
T Consensus 9 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~---------~-~vv~is~d 77 (159)
T 2a4v_A 9 IGDPIPDLSLLNEDND-SISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY---------A-AVFGLSAD 77 (159)
T ss_dssp TTCBCCSCEEECTTSC-EEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT---------C-EEEEEESC
T ss_pred CCCCCCCeEEECCCCC-EEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC---------C-cEEEEeCC
Confidence 6899999999 99999 9999999987 8999997 999999999999999999999865 6 99999998
Q ss_pred CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccc------eEEEECCCCcEEEec
Q 021505 161 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIP------CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P------t~vlid~~G~iv~~~ 213 (311)
. .+..++|.++++ +.+|+..|....+.+.|++..+| +++|| ++|+|+.+.
T Consensus 78 ~-~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 78 S-VTSQKKFQSKQN-LPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp C-HHHHHHHHHHHT-CSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred C-HHHHHHHHHHhC-CCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 4 567778887766 46888777778999999999888 89999 999999883
No 63
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.6e-21 Score=162.97 Aligned_cols=115 Identities=13% Similarity=0.171 Sum_probs=86.3
Q ss_pred cCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC----
Q 021505 86 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---- 160 (311)
Q Consensus 86 g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d---- 160 (311)
+..+|+|++ +.+|+ ++++++++||++||+|||+||++|+ ++|.|++++++|.++ +++||+|++|
T Consensus 9 ~~~~~~f~l~d~~G~-~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~~ 77 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQ-PFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE---------GFTIIGFPCNQFGH 77 (171)
T ss_dssp -CGGGGCCCBBTTSC-BCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG---------TEEEEEEEECSCC-
T ss_pred hhheeeeEEEcCCCC-EecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC---------CeEEEEEECcccCC
Confidence 567899999 99999 9999999999999999999999999 999999999999875 7999999996
Q ss_pred ---CCHHHHHHHH-hcCCCcccccCchh--HH----H-----HHHhCCCCccc------eEEEECCCCcEEEe
Q 021505 161 ---RDQTSFESYF-GTMPWLALPFGDPT--IK----E-----LTKYFDVQGIP------CLVIIGPEGKTVTK 212 (311)
Q Consensus 161 ---~~~~~~~~~~-~~~~~~~~p~~~d~--~~----~-----l~~~~~v~~~P------t~vlid~~G~iv~~ 212 (311)
++.+.++++. ++++ +.+|+..|. .. . ..+.|++.++| +++|||++|+|+.+
T Consensus 78 ~~~d~~~~~~~~~~~~~~-~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 78 QEPGSDEEIAQFCQLNYG-VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -----------------C-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred CCCCCHHHHHHHHHhccC-CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 3456777787 6554 456654321 11 1 12468999999 99999999999988
No 64
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.85 E-value=1.5e-20 Score=162.76 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=93.9
Q ss_pred hcCCCCCeEe-eCC-CCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 85 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
.+..+|+|++ +.+ |+ ++++++++||+|||+|||+||++|+.++|.|++++++|+++ +++||+|++|.
T Consensus 22 ~~~~~p~f~l~~~~~G~-~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~---------g~~vv~v~~d~~ 91 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGE-PVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR---------GLVVLGFPCNQF 91 (208)
T ss_dssp CCCCGGGCEECBTTCSS-CEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred hcCccCceEeeeCCCCC-CccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC---------CeEEEEEECCcc
Confidence 4677899999 898 99 99999999999999999999999999999999999999875 79999999972
Q ss_pred ------CHHHHHHHHh------cCCCcccccCch------h----HHHHHHhC-------------------------CC
Q 021505 162 ------DQTSFESYFG------TMPWLALPFGDP------T----IKELTKYF-------------------------DV 194 (311)
Q Consensus 162 ------~~~~~~~~~~------~~~~~~~p~~~d------~----~~~l~~~~-------------------------~v 194 (311)
+.+..++|++ +++ +.+|+..+ . ...+...+ +|
T Consensus 92 ~~~e~d~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 92 GHQENAKNEEILNSLKYVRPGGGFE-PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp TTTTCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred cccCCCCHHHHHHHHHhcccccccc-cceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 3567788876 444 55655421 0 11122222 36
Q ss_pred CccceEEEECCCCcEEEec
Q 021505 195 QGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 195 ~~~Pt~vlid~~G~iv~~~ 213 (311)
...|++||||++|+|+.+.
T Consensus 171 ~~~p~tflID~~G~i~~~~ 189 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRY 189 (208)
T ss_dssp CSTTCEEEECTTSCEEEEE
T ss_pred ccCceEEEEcCCCcEEEEe
Confidence 6779999999999999883
No 65
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.85 E-value=3e-21 Score=160.42 Aligned_cols=116 Identities=12% Similarity=0.131 Sum_probs=102.7
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCC-ChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||+++|+||++| |++|+.++|.|++++++| . +++|++|+.|.
T Consensus 20 ~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~----------~~~vv~is~d~- 86 (167)
T 2jsy_A 20 VGDQAPDFTVLTNSLE-EKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G----------DVNVYTISADL- 86 (167)
T ss_dssp TTSCCCCCEEEBTTCC-EEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S----------SCEEEEEECSS-
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C----------CCEEEEEECCC-
Confidence 5889999999 99999 99999999999999999999 999999999999999999 3 69999999984
Q ss_pred HHHHHHHHhcCCCcccccCch-hHHHHHHhCCCCc------cceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQG------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d-~~~~l~~~~~v~~------~Pt~vlid~~G~iv~~~ 213 (311)
.+..+++.+++++..+|+..| ...++.+.|++.. +|+++|||++|+|+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 87 PFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp GGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 445677777777547888777 6779999999987 49999999999999884
No 66
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.85 E-value=1.8e-21 Score=159.13 Aligned_cols=116 Identities=20% Similarity=0.333 Sum_probs=100.4
Q ss_pred HHhcCCCCCeEe-eCCC--------CceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeE
Q 021505 83 NLLTNHDRGYLL-GHPP--------DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE 153 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~~g--------~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~ 153 (311)
..+|.++|+|.+ +.+| + .+++++++||+++|+||++||++|+.+.|.|++++++ . ++.
T Consensus 8 ~~~g~~~p~f~l~~~~g~~~~~~~~~-~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~----------~v~ 74 (156)
T 1kng_A 8 ALIGRPAPQTALPPLEGLQADNVQVP-GLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--K----------RFQ 74 (156)
T ss_dssp ----CBCCCCCBCCCTTCEETTEECC-CBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T----------TSE
T ss_pred HHhCCCCCCceeeeccCcccccccCc-eechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C----------CeE
Confidence 357999999999 8888 7 9999999999999999999999999999999988765 2 589
Q ss_pred EEEEecCCCHHHHHHHHhcCCCcccc-cCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 154 VVFVSTDRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 154 vv~Vs~d~~~~~~~~~~~~~~~~~~p-~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++|++|.+.+.+.++...++ +.+| +..+....+.+.|+|.++|+++|||++|+++.+
T Consensus 75 ~v~v~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 75 LVGINYKDAADNARRFLGRYG-NPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp EEEEEESCCHHHHHHHHHHHC-CCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred EEEEECCCCHHHHHHHHHHcC-CCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 999999999999999998776 4455 555667799999999999999999999999987
No 67
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.85 E-value=3e-21 Score=179.55 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=107.6
Q ss_pred HhcCCCCCeE-----e-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 84 LLTNHDRGYL-----L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 84 ~~g~~~pdf~-----l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
.+|.++|+|. + +.+|+ ++++++++||+|||+||++||++|+.++|.|.+++++|+++ +++||+|
T Consensus 52 ~vG~~aPdF~~~~~wL~d~dG~-~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~---------~v~vi~V 121 (352)
T 2hyx_A 52 ESCGTAPDLKGITGWLNTPGNK-PIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS---------GLAVIGV 121 (352)
T ss_dssp CCCCBCCCCCSCCEEESSGGGC-CCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEE
T ss_pred CCCCcCCCccccccccCCCCCC-EEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC---------CeEEEEE
Confidence 3688999999 8 88999 99999999999999999999999999999999999999865 7999999
Q ss_pred ecC-----CCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 158 STD-----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 158 s~d-----~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++| ++.+.+++++++++ +.+|+..|....+++.|+|.++|+++|||++|+|+.+
T Consensus 122 s~d~~~~~d~~~~~~~~~~~~~-l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 122 HTPEYAFEKVPGNVAKGAANLG-ISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp ECCSSGGGGCHHHHHHHHHHHT-CCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred ECCcccccCCHHHHHHHHHHcC-CCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 986 46788999998777 5678877777899999999999999999999999988
No 68
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.85 E-value=1.9e-20 Score=165.55 Aligned_cols=119 Identities=15% Similarity=0.184 Sum_probs=102.4
Q ss_pred HhcCCCCCeEe----eCCCCceeeccccCCCEEEEEEec-CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l----~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ +.+|+ ++++++++||++||+||+ +||++|..++|.|.+++++|+++ +++||+||
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~-~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~Is 118 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFK-ELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI---------NTEVVACS 118 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeeeCCCCc-EEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47999999996 34567 999999999999999999 99999999999999999999865 89999999
Q ss_pred cCCCHHHHHHHHhcC------CCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
+|.. +...++.+.+ ..+.+|+..|...++++.||+. .+|++||||++|+|+.+.
T Consensus 119 ~D~~-~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 119 VDSQ-FTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp SSCH-HHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CCCH-HHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEE
Confidence 9863 4455555543 2477888888888999999997 789999999999999883
No 69
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.85 E-value=1.4e-20 Score=164.29 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=103.5
Q ss_pred HhcCCCCCeEe-e---CCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL-G---HPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l-~---~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ + .+|+ ++++++++||++||+|| ++||++|+.++|.|.+++++|.++ +++||+|+
T Consensus 28 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~---------~v~vv~Is 97 (220)
T 1zye_A 28 AVTQHAPYFKGTAVVSGEFK-EISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV---------NCEVVAVS 97 (220)
T ss_dssp CTTSBCCCCEEEEECSSSEE-EEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT---------TEEEEEEE
T ss_pred cCCCCCCCcEEEeeeCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47999999998 3 4678 99999999999999999 999999999999999999999865 79999999
Q ss_pred cCCCHHHHHHHHhcC----C--CcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEe
Q 021505 159 TDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~ 212 (311)
+|. .+...++.+.+ + .+.+|+..|...++++.|++. .+|++||||++|+|+.+
T Consensus 98 ~D~-~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 98 VDS-HFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp SSC-HHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCC-HHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 985 45566666654 1 367888888788999999999 99999999999999988
No 70
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.85 E-value=3.9e-21 Score=159.61 Aligned_cols=114 Identities=20% Similarity=0.183 Sum_probs=99.4
Q ss_pred HhcCCCCCeEe-eC--CCCceeecccc-CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 84 LLTNHDRGYLL-GH--PPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.+|.++|+|.+ +. +|+ .++++++ +||++||+||++||++|+.++|.|.+++++ ++.|++|++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~-~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~v~~ 88 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQ-FYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-------------GIRVVGMNY 88 (168)
T ss_dssp TTTSBCCCCEEEESSSTTC-EEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCCEEEEEE
T ss_pred ccCCcCCCeEeecccCCCc-EeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-------------CCEEEEEEC
Confidence 47999999999 77 888 9999885 899999999999999999999999887764 478999999
Q ss_pred CCCHHHHHHHHhcCCCcccc-cCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 160 DRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~p-~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
|.+.+.+.++.++++ +.++ +..+....+++.|+|.++|+++|||++|+++.+
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 89 KDDRQKAISWLKELG-NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp SCCHHHHHHHHHHHC-CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred CCChHHHHHHHHHcC-CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEE
Confidence 999999999988776 3444 345566789999999999999999999999987
No 71
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.84 E-value=1.8e-20 Score=156.88 Aligned_cols=120 Identities=17% Similarity=0.170 Sum_probs=100.0
Q ss_pred hcCCCC-CeEe-eCCCCceeeccccCCCEEEEEEecCCCh-hhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-
Q 021505 85 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 160 (311)
Q Consensus 85 ~g~~~p-df~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d- 160 (311)
+|.++| +|.+ +.+|+ ++++++++||++||+||++||+ +|..+++.|+++++++... +.+++||+|++|
T Consensus 3 ~G~~~P~~f~l~d~~G~-~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~-------~~~~~vv~is~d~ 74 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGN-EFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-------GKDFWVITFTFDP 74 (170)
T ss_dssp TTCBCCTTCEEEETTCC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCB-------TTTBEEEEEECCT
T ss_pred CCCcCCCCeEEEcCCcC-EEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhc-------CCceEEEEEECCC
Confidence 689999 9999 99999 9999999999999999999998 6999999999999999753 357999999998
Q ss_pred -CCHHHHHHHHhcCCC--ccccc----CchhHHHHHHhCCC---------CccceEEEECCCCcEEEe
Q 021505 161 -RDQTSFESYFGTMPW--LALPF----GDPTIKELTKYFDV---------QGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 161 -~~~~~~~~~~~~~~~--~~~p~----~~d~~~~l~~~~~v---------~~~Pt~vlid~~G~iv~~ 212 (311)
++.+.+++|.++++. ..+++ ..+....+++.||+ ...|+++|||++|+|+..
T Consensus 75 ~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 75 KDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp TCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 466788888887652 12211 22456789998775 456899999999999977
No 72
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=7.6e-23 Score=168.46 Aligned_cols=117 Identities=27% Similarity=0.412 Sum_probs=105.5
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHH-HHHHHH-hhhhhcCCCCCCeEEEEEecCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS-IYQKIK-QNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~-l~~~~~-~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+ +++++. .. ++.|++|++|.
T Consensus 9 ~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~---------~~~vv~v~~d~ 78 (159)
T 2ls5_A 9 IGEMAPDFTITLTDGK-QVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA---------DFALIGIDRDE 78 (159)
Confidence 6889999999 99999 999999999999999999999999999999998 988887 33 79999999998
Q ss_pred CHHHHHHHHhcCCCcccccCchhHHHHHHhCC--CCccceEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGDPTIKELTKYFD--VQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~--v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++.++++ +.+|+..|....+.+.|+ +.++|+++|||++|+|+.+
T Consensus 79 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 79 PLEKVLAFAKSTG-VTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 8777888888777 478888888889999999 5669999999999999987
No 73
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.84 E-value=4.1e-21 Score=159.82 Aligned_cols=115 Identities=12% Similarity=0.084 Sum_probs=101.8
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||+++|+|| ++||++|..++|.|++++++ + +++||+|+.|.
T Consensus 22 ~G~~aP~f~l~~~~G~-~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~---------~~~vv~is~d~- 87 (166)
T 3p7x_A 22 EGDFAPDFTVLDNDLN-QVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E---------EGIVLTISADL- 87 (166)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T---------TSEEEEEESSC-
T ss_pred CCCCCCCeEEEcCCCC-EEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C---------CCEEEEEECCC-
Confidence 6889999999 99999 99999999999999999 78999999999999999887 3 68999999874
Q ss_pred HHHHHHHHhcCCCcccccCchh-HHHHHHhCCCCc------cceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~~------~Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.++++...+|+..|. ...+.+.|++.. +|++||||++|+|+.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 145 (166)
T 3p7x_A 88 PFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE 145 (166)
T ss_dssp HHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE
Confidence 5677888887764378888787 779999999985 89999999999999873
No 74
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.84 E-value=3.8e-21 Score=159.64 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=103.2
Q ss_pred hcCCCCCeEe---eCCC--Cceeeccc-cCCCEEEEEEe-cCCChhhH-hhhHHHHHHHHHHHhhhhhcCCCCCCeE-EE
Q 021505 85 LTNHDRGYLL---GHPP--DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFE-VV 155 (311)
Q Consensus 85 ~g~~~pdf~l---~~~g--~~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~~-vv 155 (311)
+|.++|+|++ +.+| + ++++++ ++||+++|+|| ++||++|. .++|.|++++++|+++ +++ |+
T Consensus 6 ~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~---------~v~~vv 75 (162)
T 1tp9_A 6 VGDVLPDGKLAYFDEQDQLQ-EVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK---------GVTEIL 75 (162)
T ss_dssp TTCBCCCCEEEEECTTSCEE-EEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---------TCCCEE
T ss_pred CCCCCCCeEEEeecCCCCce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEE
Confidence 6889999987 6788 8 999999 99999999999 89999999 9999999999999865 799 99
Q ss_pred EEecCCCHHHHHHHHhcCCCc-ccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 156 FVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 156 ~Vs~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
+||.|. .+..++|.++++.. .+|+..|.+.++++.||+. .+|+++||| +|+|++..
T Consensus 76 ~Is~d~-~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 76 CISVND-PFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp EEESSC-HHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred EEECCC-HHHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 999984 56778888877732 6888888888999999986 289999999 99999883
No 75
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.84 E-value=2.8e-20 Score=159.71 Aligned_cols=125 Identities=18% Similarity=0.269 Sum_probs=100.3
Q ss_pred HHHhcCCC--CCeEe-eCCCCceeeccccCCCEEEEEEecCCChh-hHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 82 INLLTNHD--RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 82 ~~~~g~~~--pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
...+|.++ |+|.+ +.+|+ ++++++++||++||+||++||++ |..++|.|.++++++.++. ..+++||+|
T Consensus 12 ~~~~g~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~------~~~v~vv~I 84 (200)
T 2b7k_A 12 NRGYGKPSLGGPFHLEDMYGN-EFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY------GITLQPLFI 84 (200)
T ss_dssp ----CCCCCCCCCEEEETTSC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEE
T ss_pred HhccCCCCcCCCEEEEcCCCC-EEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh------CCceEEEEE
Confidence 34578886 99999 99999 99999999999999999999997 9999999999999987531 247999999
Q ss_pred ecCC---CHHHHHHHHhcCC--CcccccCchhHHHHHHhCCCC-ccc---------------eEEEECCCCcEEEec
Q 021505 158 STDR---DQTSFESYFGTMP--WLALPFGDPTIKELTKYFDVQ-GIP---------------CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~---~~~~~~~~~~~~~--~~~~p~~~d~~~~l~~~~~v~-~~P---------------t~vlid~~G~iv~~~ 213 (311)
++|. +.+.+++|...++ |..++...+....+++.|||. +.| +++|||++|+|+.+.
T Consensus 85 s~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~ 161 (200)
T 2b7k_A 85 TCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDAL 161 (200)
T ss_dssp ESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEE
T ss_pred ECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEe
Confidence 9995 6788888888765 444555556677899999997 444 889999999999873
No 76
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.84 E-value=7e-21 Score=161.30 Aligned_cols=118 Identities=8% Similarity=0.037 Sum_probs=95.7
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~-- 161 (311)
+|.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|++++++|+++ +++|++|++|.
T Consensus 25 ~g~~~p~f~l~~~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~is~d~~~ 94 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQFG 94 (185)
T ss_dssp GCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTTT
T ss_pred CCCCcCCceeEcCCCC-EeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECcccC
Confidence 6889999999 99999 99999999999999999999999999999999999999875 79999999873
Q ss_pred -----CHHHHHHHHhcCCCcccccCc--hhHH----HHHHhC-------CC-----CccceEEEECCCCcEEEec
Q 021505 162 -----DQTSFESYFGTMPWLALPFGD--PTIK----ELTKYF-------DV-----QGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 162 -----~~~~~~~~~~~~~~~~~p~~~--d~~~----~l~~~~-------~v-----~~~Pt~vlid~~G~iv~~~ 213 (311)
+.+.++++.++++ +.+|+.. |... .+.+.+ ++ ..+|++||||++|+|+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 168 (185)
T 2gs3_A 95 KQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 168 (185)
T ss_dssp TCCCSCHHHHHHHHHHTT-CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEE
T ss_pred CCCCCCHHHHHHHHHHcC-CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEee
Confidence 4677888887766 4456543 2111 222221 43 4479999999999999883
No 77
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.3e-21 Score=165.22 Aligned_cols=118 Identities=13% Similarity=0.138 Sum_probs=95.5
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
.+|.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|++++++|+++ +++|++|++|.
T Consensus 24 ~~g~~~p~f~l~~~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~v~vv~vs~d~~ 93 (181)
T 2p31_A 24 QQEQDFYDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH---------HFNVLAFPCNQF 93 (181)
T ss_dssp ---CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred CcCCccCceEeecCCCC-EecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC---------CEEEEEEECcCC
Confidence 36889999999 99999 99999999999999999999999999999999999999875 79999999984
Q ss_pred ------CHHHHHHHHhc-CCCcccccCc--hhHHHH---HHhCCCCccc-------eEEEECCCCcEEEe
Q 021505 162 ------DQTSFESYFGT-MPWLALPFGD--PTIKEL---TKYFDVQGIP-------CLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ------~~~~~~~~~~~-~~~~~~p~~~--d~~~~l---~~~~~v~~~P-------t~vlid~~G~iv~~ 212 (311)
+.+.++++.++ ++ +.+|+.. |.+... .-.|++.++| ++||||++|+|+.+
T Consensus 94 ~~~e~~~~~~~~~~~~~~~~-~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 94 GQQEPDSNKEIESFARRTYS-VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp TTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCCHHHHHHHHHhhcC-CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEE
Confidence 57788888876 55 4566542 211111 1135577788 99999999999988
No 78
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.84 E-value=7.2e-21 Score=156.94 Aligned_cols=110 Identities=15% Similarity=0.273 Sum_probs=98.5
Q ss_pred Ee-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-----CCHHHH
Q 021505 93 LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQTSF 166 (311)
Q Consensus 93 ~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d-----~~~~~~ 166 (311)
.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++|+.+ +++||+|++| .+.+.+
T Consensus 22 ~l~~~~g~-~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~~~~~~~~~~~ 91 (164)
T 2h30_A 22 TMKTADNR-PASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS---------SANLITVASPGFLHEKKDGEF 91 (164)
T ss_dssp TCEETTSS-BGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT---------TSEEEEEECTTSTTCCCTTHH
T ss_pred ccCCCCCC-EeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC---------CcEEEEEEcCCCccccCHHHH
Confidence 44 88999 99999999999999999999999999999999999998764 7999999986 346788
Q ss_pred HHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 167 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 167 ~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++..+.+..+++..+....+++.|+|.++|+++|||++|+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 92 QKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEE
Confidence 9988887766677777777899999999999999999999999987
No 79
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.84 E-value=6.3e-21 Score=158.66 Aligned_cols=116 Identities=13% Similarity=0.120 Sum_probs=101.1
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||++||+|| ++||++|..++|.|++++++| + +++||+||.|.
T Consensus 19 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~---------~v~vv~Is~d~- 85 (165)
T 1q98_A 19 VGEIVENFILVGNDLA-DVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S---------NTIVLCISADL- 85 (165)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T---------TEEEEEEESSC-
T ss_pred CCCCCCCeEEECCCCC-EEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CCEEEEEeCCC-
Confidence 6889999999 99999 99999999999999999 899999999999999999998 3 69999999975
Q ss_pred HHHHHHHHhcCCCcccccCchh-HHHHHHhCCCCc---------cceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~~---------~Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.++++...+|+..|. ...+.+.|++.. +|+++|||++|+|+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 86 PFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp HHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 5567777777663267877775 689999999863 59999999999999884
No 80
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.84 E-value=8.4e-21 Score=163.25 Aligned_cols=116 Identities=13% Similarity=0.172 Sum_probs=102.6
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||+++|+|| ++||++|..++|.|++++++| + +++||+||.|.
T Consensus 54 ~G~~aPdf~l~d~~G~-~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~---------~v~vv~Is~D~- 120 (200)
T 3zrd_A 54 IGDKAKDFTLVAKDLS-DVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E---------NTVVLCISSDL- 120 (200)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T---------TEEEEEEESSC-
T ss_pred CCCCCCCeEEECCCCC-EEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C---------CCEEEEEECCC-
Confidence 6899999999 99999 99999999999999999 689999999999999999988 3 69999999984
Q ss_pred HHHHHHHHhcCCCcccccCchh-HHHHHHhCCCC---------ccceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~---------~~Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.++++.-.+|+..|. ...+.+.|++. .+|++||||++|+|+.+.
T Consensus 121 ~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 121 PFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp HHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEE
Confidence 5677777777763378888887 78999999996 369999999999999884
No 81
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.84 E-value=3.5e-21 Score=163.83 Aligned_cols=117 Identities=13% Similarity=0.169 Sum_probs=97.2
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~-- 161 (311)
.+.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|++++++|.++ +++||+|++|.
T Consensus 24 ~~~~~p~f~l~~~~G~-~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~ 93 (190)
T 2vup_A 24 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPCNQFG 93 (190)
T ss_dssp CCCSGGGSCCBBTTSS-BCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TCEEEEEECCCST
T ss_pred CCCcccCeEEEcCCCC-EEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC---------CeEEEEEEcCccC
Confidence 4778999999 99999 99999999999999999999999999999999999999875 79999999984
Q ss_pred -----CHHHHHHHH-hcCCCcccccCc--hhHHH----H-----HHhCCCCccc------eEEEECCCCcEEEe
Q 021505 162 -----DQTSFESYF-GTMPWLALPFGD--PTIKE----L-----TKYFDVQGIP------CLVIIGPEGKTVTK 212 (311)
Q Consensus 162 -----~~~~~~~~~-~~~~~~~~p~~~--d~~~~----l-----~~~~~v~~~P------t~vlid~~G~iv~~ 212 (311)
+.+.++++. .+++ +.+|+.. |.... + .+.|++.++| +++|||++|+|+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 94 GQEPGNEEEIKEFVCTKFK-AEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp TCCCSCHHHHHHHHHHHHC-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCHHHHHHHHHHhcC-CCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 667888888 5544 3455442 21111 2 2347999999 99999999999988
No 82
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.83 E-value=1.8e-20 Score=156.59 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=100.3
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ ++++++++||+++|+|| ++||++|..++|.|++++++| + +++||+|+.|.
T Consensus 23 ~g~~~P~f~l~~~~G~-~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~---------~v~vv~Is~d~- 89 (171)
T 2yzh_A 23 VGDRAPEAVVVTKDLQ-EKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E---------GVDVTVVSMDL- 89 (171)
T ss_dssp TTSBCCCEEEEETTSC-EEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESSC-
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C---------CceEEEEeCCC-
Confidence 5889999999 99999 99999999999999999 899999999999999999888 3 69999999985
Q ss_pred HHHHHHHHhcCCCcccccCch-hHHHHHHhCCCCc---------cceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQG---------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d-~~~~l~~~~~v~~---------~Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.++++...+|+..| ....+ +.|++.. +|+++|||++|+|+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 90 PFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp HHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 556777888776326787777 66788 9999862 69999999999999884
No 83
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.83 E-value=9.3e-20 Score=152.66 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=94.6
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCCh-hhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
-+|.++|+|+| +.+|+ ++++++++||+|||+||++||+ +|...++.|.++++.+++. +.++++|+||+|.
T Consensus 7 P~~~~~PdF~L~d~~G~-~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~-------~~~v~~v~isvDp 78 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGK-PFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEE-------KLDVQFVSFSVDP 78 (170)
T ss_dssp CCCBCCCCCEEECTTSC-EEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHT-------TCCCEEEEEESCT
T ss_pred CCCCcCCCcEEECCCCC-EEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcc-------cccceeEeeecCc
Confidence 36889999999 99999 9999999999999999999997 7999999999999999875 5689999999984
Q ss_pred ---CHHHHHHHHhcCC-----CcccccCch-h-HHHHHHhCC----------CCccceEEEECCCCcEEEe
Q 021505 162 ---DQTSFESYFGTMP-----WLALPFGDP-T-IKELTKYFD----------VQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ---~~~~~~~~~~~~~-----~~~~p~~~d-~-~~~l~~~~~----------v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.+++|.+.++ |..+..... . .......|+ +...|+++|||++|+|+..
T Consensus 79 ~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 79 DLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp TTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEE
T ss_pred ccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEE
Confidence 5678888887654 222222111 1 112223333 3446899999999999976
No 84
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.83 E-value=6.5e-21 Score=161.03 Aligned_cols=118 Identities=9% Similarity=0.074 Sum_probs=97.2
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
.+|.++|+|.+ +.+|+ ++++++++||++||+||++||++|+.++|.|.+++++|+++ +++|++|++|.
T Consensus 22 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~ 91 (183)
T 2obi_A 22 RCARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQF 91 (183)
T ss_dssp GGCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred cccCcccceEEEcCCCC-EeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC---------CeEEEEEECCCC
Confidence 47899999999 99999 99999999999999999999999999999999999999875 79999999983
Q ss_pred ------CHHHHHHHHhcCCCcccccCc--hhHH----HHHHhC-------C-----CCccceEEEECCCCcEEEe
Q 021505 162 ------DQTSFESYFGTMPWLALPFGD--PTIK----ELTKYF-------D-----VQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ------~~~~~~~~~~~~~~~~~p~~~--d~~~----~l~~~~-------~-----v~~~Pt~vlid~~G~iv~~ 212 (311)
+.+.++++.++++ +.+|+.. |... .+.+.+ + |..+|+++|||++|+|+.+
T Consensus 92 ~~~e~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 92 GKQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp TTCCCSCHHHHHHHHHTTT-CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred CCCCCCCHHHHHHHHHHcC-CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 5778888888776 4566543 2211 122221 4 4557999999999999988
No 85
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.83 E-value=3e-20 Score=155.28 Aligned_cols=117 Identities=14% Similarity=0.128 Sum_probs=102.1
Q ss_pred hcCCCCCeEe--eCCCCceeecccc-CCCEEEEEEe-cCCChhhHh-hhHHHHHHHHHHHhhhhhcCCCCCCe-EEEEEe
Q 021505 85 LTNHDRGYLL--GHPPDEKVPVSSL-VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDF-EVVFVS 158 (311)
Q Consensus 85 ~g~~~pdf~l--~~~g~~~v~l~~~-~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~Vs 158 (311)
+|.++|+|.+ +.+|+ +++++++ +||+++|+|| ++||++|.. ++|.|++++++|+++ ++ +||+||
T Consensus 5 ~G~~aP~f~l~~~~~G~-~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv~Is 74 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPND-KVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK---------GVDIIACMA 74 (167)
T ss_dssp TTCBCCCCEEESSSTTC-EEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred CCCcCCCcEeecCCCCc-EEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 6889999998 67888 9999998 9999988886 999999999 999999999999875 79 999999
Q ss_pred cCCCHHHHHHHHhcCCCc-ccccCchhHHHHHHhCCCCcc-----------ceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQGI-----------PCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~~~-----------Pt~vlid~~G~iv~~~ 213 (311)
.|. .+..+++.++.+.. .+|+..|...++.+.||+... |++||| ++|+|++..
T Consensus 75 ~d~-~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~ 139 (167)
T 2wfc_A 75 VND-SFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVN 139 (167)
T ss_dssp SSC-HHHHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEE
T ss_pred CCC-HHHHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEE
Confidence 984 56777888877632 388888888899999999754 999999 999999883
No 86
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.83 E-value=4.1e-20 Score=164.71 Aligned_cols=119 Identities=14% Similarity=0.179 Sum_probs=102.3
Q ss_pred HhcCCCCCeEe----eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l----~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ +.+|+ ++++++++||++||+|| ++||++|..++|.|.+++++|+++ +++||+||
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~-~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~IS 132 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 132 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeecCCCCc-EEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEc
Confidence 47999999996 34678 99999999999999999 999999999999999999999865 89999999
Q ss_pred cCCCHHHHHHHHhcC------CCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 159 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
+|.. ....++.+.+ ..+.+|+..|....+++.||+. .+|++||||++|+|+...
T Consensus 133 ~D~~-~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~ 198 (254)
T 3tjj_A 133 VDSQ-FTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 198 (254)
T ss_dssp SSCH-HHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CCCH-HHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEE
Confidence 9864 4555666543 1477888888888999999995 589999999999999883
No 87
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.82 E-value=2.2e-20 Score=156.89 Aligned_cols=115 Identities=15% Similarity=0.155 Sum_probs=97.3
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCC-ChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 162 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~ 162 (311)
+|.++|+|.+ +.+|+ .+++++++||++||+||++| |++|+.++|.|.+++++ . +++||+|++|.
T Consensus 20 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~---------~v~vv~Is~D~- 85 (175)
T 1xvq_A 20 VGSPAPAFTLTGGDLG-VISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S---------GATVLCVSKDL- 85 (175)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T---------TCEEEEEESSC-
T ss_pred cCCcCCCeEEECCCCC-EEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c---------CCEEEEEECCC-
Confidence 6889999999 99999 99999999999999999999 99999999999999988 3 68999999975
Q ss_pred HHHHHHHHhcCCCcccccCchhHHHHHHhCCCCcc---------ceEEEECCCCcEEEec
Q 021505 163 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGI---------PCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~---------Pt~vlid~~G~iv~~~ 213 (311)
.+..++|.+++++..+|+..|....+.+.|++... |+++|||++|+|+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 86 PFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp HHHHTTCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 44566677766643778877767889999999887 9999999999999883
No 88
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.82 E-value=1.3e-20 Score=160.06 Aligned_cols=118 Identities=11% Similarity=0.131 Sum_probs=99.6
Q ss_pred HhcCCCCCeEe-eC--CC-Cceeeccc-cCCCE-EEEEEecCCChhhHh-hhHHHHHHHHHHHhhhhhcCCCCCCeE-EE
Q 021505 84 LLTNHDRGYLL-GH--PP-DEKVPVSS-LVGKT-VGLYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDFE-VV 155 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g-~~~v~l~~-~~gk~-vll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~~~~~-vv 155 (311)
.+|.++|+|++ +. +| + ++++++ ++||+ ||++||++|||+|.. ++|.|++++++|+++ +++ |+
T Consensus 27 ~vG~~aPdf~l~~~~~~G~~-~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv 96 (184)
T 3uma_A 27 AVGDKLPNATFKEKTADGPV-EVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR---------GVDDIA 96 (184)
T ss_dssp CTTCBCCCCEEEEEETTEEE-EEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEEE
T ss_pred CCCCCCCCcEeecccCCCce-EEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc---------CCCEEE
Confidence 36999999999 76 88 8 999999 89995 555667999999999 799999999999865 788 99
Q ss_pred EEecCCCHHHHHHHHhcCCCc-ccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 156 FVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 156 ~Vs~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
+||.|+ ....++|.++.+.. .+|+..|.+.++++.||+. ..|++|||| +|+|++..
T Consensus 97 ~Is~d~-~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~ 164 (184)
T 3uma_A 97 VVAVND-LHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALN 164 (184)
T ss_dssp EEESSC-HHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEE
T ss_pred EEECCC-HHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEE
Confidence 999985 55667777766633 4899999889999999985 358899996 99999884
No 89
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.82 E-value=3.9e-20 Score=160.89 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=91.4
Q ss_pred hcCCCCCeEe-eCC-CCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 85 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
.+..+|+|.+ +.+ |+ ++++++++||+|||+|||+||++|+ ++|.|++++++|+++ +++||+|++|.
T Consensus 31 ~~~~~pdF~l~d~~~G~-~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~---------g~~Vlgvs~d~f 99 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNE-YVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY---------GLVVLGFPCNQF 99 (215)
T ss_dssp CCCCGGGCEEEBSSSSC-EEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred ccCCcCCcEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC---------CeEEEEEEcccc
Confidence 3557899999 999 89 9999999999999999999999999 999999999999876 79999999762
Q ss_pred ------CHHHHHHHHh------cCCCcccccCchh--H--------HHHHHh-------CC--------------CCccc
Q 021505 162 ------DQTSFESYFG------TMPWLALPFGDPT--I--------KELTKY-------FD--------------VQGIP 198 (311)
Q Consensus 162 ------~~~~~~~~~~------~~~~~~~p~~~d~--~--------~~l~~~-------~~--------------v~~~P 198 (311)
+.++.++|++ +++ +.+|+..+. + ..+... ++ |...|
T Consensus 100 ~~~e~~~~~~i~~f~~~~~~~~~~~-~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~np 178 (215)
T 2i3y_A 100 GKQEPGDNKEILPGLKYVRPGGGFV-PSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNF 178 (215)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTT
T ss_pred CcCCCCCHHHHHHHHHhccchhccC-ccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCc
Confidence 4567788887 555 566664321 1 112221 11 22338
Q ss_pred eEEEECCCCcEEEec
Q 021505 199 CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 199 t~vlid~~G~iv~~~ 213 (311)
++||||++|+|+.+.
T Consensus 179 ttfLID~~G~vv~~~ 193 (215)
T 2i3y_A 179 EKFLVGPDGIPVMRW 193 (215)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEECCCCeEEEEe
Confidence 999999999999883
No 90
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.82 E-value=5.2e-20 Score=162.41 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=102.2
Q ss_pred hcCCCCCeEe-eCCCCc--eeeccc-cCCCEEEEEEe-cCCChhhH-hhhHHHHHHHHHHHhhhhhcCCCCCCe-EEEEE
Q 021505 85 LTNHDRGYLL-GHPPDE--KVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDF-EVVFV 157 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~--~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~V 157 (311)
+|.++|+|.+ +.++.+ ++++++ ++||+++|+|| ++||++|. .++|.|++++++|+++ ++ +|++|
T Consensus 5 ~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~---------~~~~vv~i 75 (241)
T 1nm3_A 5 EGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY---------GVDDILVV 75 (241)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT---------TCCEEEEE
T ss_pred CCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEEE
Confidence 6899999999 643332 699999 89999999999 99999999 9999999999999875 79 99999
Q ss_pred ecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 158 STDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
|.|. .+..+++.++++...+|+..|.+.++++.||+. ..|+++|| ++|+|++..
T Consensus 76 s~d~-~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~ 140 (241)
T 1nm3_A 76 SVND-TFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMF 140 (241)
T ss_dssp ESSC-HHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEE
T ss_pred EcCC-HHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEE
Confidence 9985 567788888777555898888888999999986 45999999 999999883
No 91
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.82 E-value=4.3e-20 Score=155.29 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=100.5
Q ss_pred HHhcCCCCCeEe--eCCCCceeeccc-cCCCEEEEE-EecCCChhhH-hhhHHHHHHHHHHHhhhhhcCCCCCCeEEEE-
Q 021505 83 NLLTNHDRGYLL--GHPPDEKVPVSS-LVGKTVGLY-FSARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFEVVF- 156 (311)
Q Consensus 83 ~~~g~~~pdf~l--~~~g~~~v~l~~-~~gk~vll~-F~a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~- 156 (311)
..+|.++|+|++ +.+|+ ++++++ ++||+++|+ ||++||++|. .++|.|++++++|+++ +++||+
T Consensus 15 ~~vG~~aPdf~l~~~~~g~-~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~---------gv~vv~~ 84 (173)
T 3mng_A 15 IKVGDAIPAVEVFEGEPGN-KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK---------GVQVVAC 84 (173)
T ss_dssp CCTTCBCCCCEEECSSTTC-EEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEEEE
T ss_pred CCCCCCCCCeEeeeCCCCC-EEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC---------CCEEEEE
Confidence 457999999999 57888 999999 599966555 4599999999 5999999999999865 899997
Q ss_pred EecCCCHHHHHHHHhcCCCc-ccccCchhHHHHHHhCCCC-------------ccceEEEECCCCcEEEec
Q 021505 157 VSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-------------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 157 Vs~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-------------~~Pt~vlid~~G~iv~~~ 213 (311)
||.|. ....+++.++.+.. .+|+..|.+.++++.||+. ..|++|||| +|+|++..
T Consensus 85 iS~D~-~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 85 LSVND-AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp EESSC-HHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred EcCCC-HHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 99885 55677777777643 4899999889999999985 459999999 99999884
No 92
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=155.92 Aligned_cols=117 Identities=9% Similarity=0.077 Sum_probs=90.4
Q ss_pred hcCCCCCeEe-eCC-CCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC-
Q 021505 85 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 161 (311)
Q Consensus 85 ~g~~~pdf~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~- 161 (311)
....+|+|.+ +.+ |+ .+++++++||+|||+|||+||++| .++|.|++++++|+++ +++||+|++|.
T Consensus 13 ~~~~~pdF~l~d~~~G~-~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~---------g~~vlgvs~d~f 81 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEE-YIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF---------GLVILGFPCNQF 81 (207)
T ss_dssp --CCGGGCEEEBTTSSC-EEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG---------TEEEEEEECCCB
T ss_pred ccCccCCeEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC---------CEEEEEEECccc
Confidence 4567899999 999 89 999999999999999999999999 7999999999999876 79999999762
Q ss_pred ------CHHHHHHHHh------cCCCcccccCchh--H----H----HHHHhC-------C--------------CCccc
Q 021505 162 ------DQTSFESYFG------TMPWLALPFGDPT--I----K----ELTKYF-------D--------------VQGIP 198 (311)
Q Consensus 162 ------~~~~~~~~~~------~~~~~~~p~~~d~--~----~----~l~~~~-------~--------------v~~~P 198 (311)
+.++.++|.+ +++ +.+|+..+. + . .+.... + |...|
T Consensus 82 ~~~e~~~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 82 GKQEPGENSEILPTLKYVRPGGGFV-PNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred CcCCCCCHHHHHHHHHhcchhhccC-ccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 4567788887 555 566654321 1 1 122221 1 22338
Q ss_pred eEEEECCCCcEEEec
Q 021505 199 CLVIIGPEGKTVTKQ 213 (311)
Q Consensus 199 t~vlid~~G~iv~~~ 213 (311)
++||||++|+|+.+.
T Consensus 161 ttflID~~G~i~~~~ 175 (207)
T 2r37_A 161 EKFLVGPDGIPIMRW 175 (207)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEECCCCcEEEEE
Confidence 999999999999883
No 93
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.82 E-value=2.1e-20 Score=156.77 Aligned_cols=119 Identities=13% Similarity=0.147 Sum_probs=99.6
Q ss_pred HHhcCCCCCeEe-eC----CC-----Cceeecccc-CCC-EEEEEEecCCChhhHhh-hHHHHHHHHHHHhhhhhcCCCC
Q 021505 83 NLLTNHDRGYLL-GH----PP-----DEKVPVSSL-VGK-TVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDAL 149 (311)
Q Consensus 83 ~~~g~~~pdf~l-~~----~g-----~~~v~l~~~-~gk-~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~ 149 (311)
..+|.++|+|.+ +. +| + +++++++ +|| +||++||++||++|..+ +|.|++++++|+++
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~-~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-------- 77 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFS-TTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-------- 77 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCC-CEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT--------
T ss_pred ccccCcCCCeEEecccccccCCccCcc-eEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC--------
Confidence 346889999999 65 46 7 9999996 996 67788999999999999 99999999999875
Q ss_pred CCeE-EEEEecCCCHHHHHHHHhcCCC-cccccCchhHHHHHHhCCCCc-----------cceEEEECCCCcEEEec
Q 021505 150 EDFE-VVFVSTDRDQTSFESYFGTMPW-LALPFGDPTIKELTKYFDVQG-----------IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 150 ~~~~-vv~Vs~d~~~~~~~~~~~~~~~-~~~p~~~d~~~~l~~~~~v~~-----------~Pt~vlid~~G~iv~~~ 213 (311)
+++ |++||.|+ ....+++.++++. ..+|+..|.+.++++.||+.. .|+++||| +|+|++.+
T Consensus 78 -g~~~vv~Is~d~-~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 78 -GVDSVICVAIND-PYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp -TCSEEEEEESSC-HHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred -CCCEEEEEeCCC-HHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEE
Confidence 788 99999985 5577888888775 478888888889999999852 56889999 99999883
No 94
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.80 E-value=3.7e-19 Score=156.56 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=100.1
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCC-EEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+|.++|+|.+ +.+| ++++++++|| ++||+|| ++||++|..+++.|++++++|+++ +++||+||+|
T Consensus 4 ~iG~~aPdF~l~~~~G--~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~---------~v~vigIS~D 72 (233)
T 2v2g_A 4 TLGEVFPNFEADSTIG--KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR---------GVKLIALSCD 72 (233)
T ss_dssp CTTCBCCCCEEEETTC--CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEESS
T ss_pred CCCCCCCCcEEecCCC--CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc---------CCEEEEEcCC
Confidence 37899999999 7777 5999999998 9999998 999999999999999999999876 8999999999
Q ss_pred CCHHHHHHHHh------cCC-CcccccCchhHHHHHHhCCCC------------ccceEEEECCCCcEEEec
Q 021505 161 RDQTSFESYFG------TMP-WLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~~~~~~~~~~~------~~~-~~~~p~~~d~~~~l~~~~~v~------------~~Pt~vlid~~G~iv~~~ 213 (311)
.. ...+++.+ ..+ .+.+|+..|...++++.||+. .+|++||||++|+|+...
T Consensus 73 ~~-~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 73 NV-ADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp CH-HHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEE
T ss_pred CH-HHHHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEE
Confidence 63 33334443 331 467888888888999999985 579999999999999883
No 95
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.80 E-value=4.9e-20 Score=153.11 Aligned_cols=119 Identities=24% Similarity=0.331 Sum_probs=99.3
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChh-hHhhhHHHHHHHHHHHhhhhhcCCCC-CCeEEEEEecC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDAL-EDFEVVFVSTD 160 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~-~~~~vv~Vs~d 160 (311)
+.|.++|+|.+ +.+| .+++++++||++||+||++||++ |+.++|.|.+++++|+++ + .+++|++|++|
T Consensus 11 ~~G~~~p~f~l~~~~g--~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~-------~~~~v~vv~is~d 81 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG--PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK-------AQERVQVIFVSVD 81 (172)
T ss_dssp EEEEEECCCEEECSSS--EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH-------HHTTEEEEEEESC
T ss_pred ccCCCCCCeEEEcCCC--CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh-------ccCCEEEEEEEEC
Confidence 45788999999 7777 89999999999999999999997 999999999999988753 1 36999999998
Q ss_pred C---CHHHHHHHHhcCCCcccccCchhH---HHHHHhCCC---------------CccceEEEECCCCcEEEec
Q 021505 161 R---DQTSFESYFGTMPWLALPFGDPTI---KELTKYFDV---------------QGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~---~~~~~~~~~~~~~~~~~p~~~d~~---~~l~~~~~v---------------~~~Pt~vlid~~G~iv~~~ 213 (311)
. +.+.++++.++++ ..+++..+.. ..+.+.|++ .++|+++||| +|+|+.+.
T Consensus 82 ~~~d~~~~~~~~~~~~~-~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 82 PERDPPEVADRYAKAFH-PSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp TTTCCHHHHHHHHHHHC-TTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred CCCCCHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 5 4577888888766 5666655544 578888775 5789999999 99999883
No 96
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.80 E-value=2.1e-19 Score=156.50 Aligned_cols=137 Identities=7% Similarity=0.042 Sum_probs=108.3
Q ss_pred hcCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCC-ChhhH-----hhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 85 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCE-----KFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 85 ~g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~-----~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
+|.++|+|+| +.+|+ ++++++++||++||+||++| ||+|. .+++.|.++ | + +++||+|
T Consensus 24 vG~~APdFtL~d~~G~-~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~---------gv~VvgI 88 (224)
T 3keb_A 24 KGDYLPSFMLVDDQKH-DAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--P---------HLKLIVI 88 (224)
T ss_dssp TTCBCCCCEEEETTSC-EEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--T---------TSEEEEE
T ss_pred CCCCCCCeEEECCCCC-EEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--C---------CCEEEEE
Confidence 6899999999 99999 99999999999999999988 99999 888888776 3 3 6899999
Q ss_pred ecCCCHHHHHHHHhcCCCcccccCchh-HHHHHHhCCCCc---------cceEEEECCCCcEEEeccchhhhcccccCCC
Q 021505 158 STDRDQTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQGRNLINLYQENAYP 227 (311)
Q Consensus 158 s~d~~~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~~---------~Pt~vlid~~G~iv~~~g~~~~~~~g~~~~p 227 (311)
|.|. ....++|..+++...+|++.|. ...+++.|||.. +|++||||++|+|++...... ...-|
T Consensus 89 S~Ds-~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~-----~~~~p 162 (224)
T 3keb_A 89 TVDS-PSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLAN-----TRDFF 162 (224)
T ss_dssp ESSC-HHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB-----TTCCC
T ss_pred ECCC-HHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCC-----CCCCC
Confidence 9985 5567777777764478998887 589999999964 799999999999998743211 11234
Q ss_pred CcHHHHHHHHHHHHH
Q 021505 228 FTEAKLEFLEKQMEE 242 (311)
Q Consensus 228 ~~~~~i~~L~~~~~~ 242 (311)
..++.++.|.+..++
T Consensus 163 d~~evl~~L~~l~~~ 177 (224)
T 3keb_A 163 DFDAIEKLLQEGEQQ 177 (224)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhc
Confidence 455666665554444
No 97
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.4e-19 Score=156.62 Aligned_cols=120 Identities=18% Similarity=0.230 Sum_probs=101.9
Q ss_pred HHhcCCCCCeEe----eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 83 NLLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 83 ~~~g~~~pdf~l----~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
..+|+++|||++ +.+++ +++|++++||+|||+|| +.||+.|..+++.+++.+++|+++ +++|++|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~---------g~~vigi 92 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFD-EVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ---------GAQVLFA 92 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEE-EECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT---------TEEEEEE
T ss_pred hhcCCcCCCCCCcceECCCCc-EEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC---------CceEEEe
Confidence 458999999986 55667 99999999999999999 899999999999999999999976 8999999
Q ss_pred ecCCC--HHHHHHHHhc---CCCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEe
Q 021505 158 STDRD--QTSFESYFGT---MPWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 158 s~d~~--~~~~~~~~~~---~~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~ 212 (311)
|.|.. ...|.+..+. ...+.+|+..|.+.++++.|||- ..+++||||++|+|++.
T Consensus 93 S~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~ 158 (216)
T 3sbc_A 93 STDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHI 158 (216)
T ss_dssp ESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEE
Confidence 99974 3445544332 22478899999999999999983 46899999999999876
No 98
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.79 E-value=1e-18 Score=152.92 Aligned_cols=119 Identities=12% Similarity=0.219 Sum_probs=97.7
Q ss_pred HhcCCCCCeEe-eCCCCceeeccccCCC--EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l~~~~gk--~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+|.++|+|.+ +.+| ++++++++|| +||++||++||++|..+++.|++++++|+++ +++||+||+|
T Consensus 6 ~~G~~aP~F~l~~~~G--~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~IS~D 74 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG--RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR---------NVKLIALSID 74 (224)
T ss_dssp CTTCBCCCCEEEETTE--EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESS
T ss_pred CCcCCCCCcEEecCCC--CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC---------CCEEEEEcCC
Confidence 37899999999 7777 6999999998 5666679999999999999999999999865 8999999999
Q ss_pred CCH--HHHHHHHhcC------CCcccccCchhHHHHHHhCCCC------------ccceEEEECCCCcEEEec
Q 021505 161 RDQ--TSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 161 ~~~--~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------------~~Pt~vlid~~G~iv~~~ 213 (311)
... ..|.+.+.+. ..+.+|+..|...++++.||+. .+|++||||++|+|+...
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 147 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSI 147 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEE
T ss_pred CHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEE
Confidence 643 2343333221 2367888888888999999984 479999999999999883
No 99
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.78 E-value=9.7e-19 Score=155.12 Aligned_cols=119 Identities=11% Similarity=0.148 Sum_probs=99.8
Q ss_pred HhcCCCCCeEe-eCCCCceeec-ccc--CCCE-EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL-GHPPDEKVPV-SSL--VGKT-VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l-~~~g~~~v~l-~~~--~gk~-vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ +.+| ++++ +++ +||+ ||++||++||++|..+++.|.+++++|+++ +++||+||
T Consensus 6 ~iG~~aPdF~l~~~~G--~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~---------gv~VI~VS 74 (249)
T 3a2v_A 6 LIGERFPEMEVTTDHG--VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL---------GVDLIGLS 74 (249)
T ss_dssp CTTSBCCCEEEEETTE--EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEE
T ss_pred CCCCCCCCeEEEcCCC--CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC---------CcEEEEEE
Confidence 47999999999 7776 6999 999 9996 456789999999999999999999999876 89999999
Q ss_pred cCCCH--HHHHHHHhcC--CCcccccCchhHHHHHHhCCCC-------ccceEEEECCCCcEEEec
Q 021505 159 TDRDQ--TSFESYFGTM--PWLALPFGDPTIKELTKYFDVQ-------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~--~~~~~~~~~~--~~~~~p~~~d~~~~l~~~~~v~-------~~Pt~vlid~~G~iv~~~ 213 (311)
+|... ..|.+.+.+. ..+.+|+..|...++++.|||. ++|++||||++|+|+...
T Consensus 75 ~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~ 140 (249)
T 3a2v_A 75 VDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTML 140 (249)
T ss_dssp SSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEE
Confidence 98743 3455544321 1367888888888999999997 899999999999999883
No 100
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.78 E-value=7e-19 Score=153.50 Aligned_cols=119 Identities=11% Similarity=0.146 Sum_probs=96.9
Q ss_pred HhcCCCCCeEe-eC--CCCceeeccccCCC-E-EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEe
Q 021505 84 LLTNHDRGYLL-GH--PPDEKVPVSSLVGK-T-VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l-~~--~g~~~v~l~~~~gk-~-vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs 158 (311)
.+|.++|+|.+ +. +| ++++++++|| + ||++||++||++|..+++.|++++++|+++ +++||+||
T Consensus 4 ~iG~~aP~F~l~~~~~~G--~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~vS 72 (220)
T 1xcc_A 4 HLGATFPNFTAKASGIDG--DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL---------NCKLIGFS 72 (220)
T ss_dssp CTTCBCCCCEECBTTCSS--CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeecccCCC--cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc---------CCEEEEEe
Confidence 37899999999 66 55 6999999998 4 555568999999999999999999999865 89999999
Q ss_pred cCCCH--HHHHHHHhc---CCCcccccCchhHHHHHHhCCCC------------ccceEEEECCCCcEEEec
Q 021505 159 TDRDQ--TSFESYFGT---MPWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~~--~~~~~~~~~---~~~~~~p~~~d~~~~l~~~~~v~------------~~Pt~vlid~~G~iv~~~ 213 (311)
+|... ..|.+.+.+ ...+.+|+..|...++++.||+. .+|++||||++|+|+...
T Consensus 73 ~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 73 CNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp SSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 99643 334443321 13367888888888999999983 479999999999999884
No 101
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.76 E-value=1.1e-18 Score=151.17 Aligned_cols=119 Identities=18% Similarity=0.260 Sum_probs=100.7
Q ss_pred HhcCCCCCeE----e-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEE
Q 021505 84 LLTNHDRGYL----L-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 157 (311)
Q Consensus 84 ~~g~~~pdf~----l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~V 157 (311)
.+|++||+|+ + +.+|+ +++|++++||+|||+|| +.||+.|..++..+++++++|+++ +++|++|
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~---------g~~vigi 96 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFK-KISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL---------NCEVLAC 96 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT---------TEEEEEE
T ss_pred ccCCcCCCCcccccccCCCCc-EEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC---------CcEEEEe
Confidence 4899999998 4 67888 99999999999999999 899999999999999999999976 8999999
Q ss_pred ecCCC--HHHHHHHHh-c--CCCcccccCchhHHHHHHhCCCC------ccceEEEECCCCcEEEe
Q 021505 158 STDRD--QTSFESYFG-T--MPWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 158 s~d~~--~~~~~~~~~-~--~~~~~~p~~~d~~~~l~~~~~v~------~~Pt~vlid~~G~iv~~ 212 (311)
|.|.. ...|.+... . ...+.+|++.|.+.++++.|||- ....+||||++|+|+..
T Consensus 97 S~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~ 162 (219)
T 3tue_A 97 SIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQI 162 (219)
T ss_dssp ESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred eCCchhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEE
Confidence 99974 344543322 1 22467888999999999999983 34689999999999876
No 102
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.71 E-value=6.1e-17 Score=148.96 Aligned_cols=110 Identities=16% Similarity=0.172 Sum_probs=93.0
Q ss_pred CCCCCeEe-eCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 87 NHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 87 ~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
..+|+|+| +.+|+ +++|++++||+|||+|| +.|||.|..+++.+++ .. ..+++|++||.|. ..
T Consensus 2 ak~p~F~l~~~~G~-~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~------~~-------~~~~~v~gis~D~-~~ 66 (322)
T 4eo3_A 2 ARVKHFELLTDEGK-TFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR------EN-------FEKAQVVGISRDS-VE 66 (322)
T ss_dssp CBCCCCEEEETTSC-EEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH------SC-------CTTEEEEEEESCC-HH
T ss_pred CCCCCcEEECCCcC-EEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH------Hh-------hCCCEEEEEeCCC-HH
Confidence 35899999 99999 99999999999999999 5799999999887643 11 3479999999975 45
Q ss_pred HHHHHHhcCCCcccccCchhHHHHHHhCCC----CccceEEEECCCCcEEEe
Q 021505 165 SFESYFGTMPWLALPFGDPTIKELTKYFDV----QGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 165 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v----~~~Pt~vlid~~G~iv~~ 212 (311)
..++|..+++ +.||++.|.+.++++.||| ..+|++||||++|+|+..
T Consensus 67 ~~~~f~~~~~-l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~ 117 (322)
T 4eo3_A 67 ALKRFKEKND-LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKE 117 (322)
T ss_dssp HHHHHHHHHT-CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEE
T ss_pred HHHHHHHhhC-CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEE
Confidence 5666776666 6889999989999999999 458999999999999865
No 103
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.66 E-value=4.5e-16 Score=119.88 Aligned_cols=72 Identities=24% Similarity=0.490 Sum_probs=61.7
Q ss_pred ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 106 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 106 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
+..+|+|+|+|||+||++|+.+.|.+.++.+.+. ++.++.|++|. .
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~d~-----------------------~ 62 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-----------DVVFLKVDVDE-----------------------C 62 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEEETTT-----------------------C
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-----------CeEEEEEeccc-----------------------C
Confidence 3457899999999999999999999999887764 56777777665 4
Q ss_pred HHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.++++.|+|.++||++++ ++|+++.+
T Consensus 63 ~~l~~~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 63 EDIAQDNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred HHHHHHcCCCeecEEEEE-ECCEEEEE
Confidence 489999999999999999 89999987
No 104
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.66 E-value=4.9e-16 Score=122.65 Aligned_cols=92 Identities=13% Similarity=0.204 Sum_probs=74.0
Q ss_pred CCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHH
Q 021505 89 DRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFE 167 (311)
Q Consensus 89 ~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~ 167 (311)
++++.. +.+|. .......+||+++|+||++||++|+.+.|.|.++++++.. ++.++.|+.|.+.
T Consensus 6 ~~~l~~~~~~~~-~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~d~---- 70 (126)
T 2l57_A 6 IKQINFQSINVV-ENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG----------KFNIYYARLEEEK---- 70 (126)
T ss_dssp SSCTTTTCCSEE-SSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS----------SCEEEEEETTSSH----
T ss_pred cCCCCccccchh-HHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCCc----
Confidence 344444 44444 3335566889999999999999999999999999988753 6889999854333
Q ss_pred HHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 168 SYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 168 ~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+++.|+|.++|++++++++|+++.+
T Consensus 71 -----------------~~~~~~~~~v~~~Pt~~~~~~~G~~~~~ 98 (126)
T 2l57_A 71 -----------------NIDLAYKYDANIVPTTVFLDKEGNKFYV 98 (126)
T ss_dssp -----------------HHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred -----------------hHHHHHHcCCcceeEEEEECCCCCEEEE
Confidence 5689999999999999999999999887
No 105
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.65 E-value=6.1e-17 Score=129.78 Aligned_cols=95 Identities=18% Similarity=0.334 Sum_probs=75.6
Q ss_pred hcCCCCCeE-e-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 85 LTNHDRGYL-L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 85 ~g~~~pdf~-l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.+..+|+|. + +.++. ...+++.+||+++|+||++||++|+.+.|.+ .++.++++ ++.++.|++
T Consensus 6 ~~~~~~~f~~~~~~~~~-~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-----------~~~~~~vd~ 73 (134)
T 2fwh_A 6 QTQTHLNFTQIKTVDEL-NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-----------DTVLLQANV 73 (134)
T ss_dssp ----CCCCEECCSHHHH-HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-----------TSEEEEEEC
T ss_pred ccccCCCcEEecCHHHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-----------CcEEEEEeC
Confidence 467788998 4 44454 6677788899999999999999999999988 77777664 588899988
Q ss_pred CCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEE
Q 021505 160 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
+... +....+++.|+|.++|+++++|++|+++
T Consensus 74 ~~~~-------------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 74 TAND-------------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp TTCC-------------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred CCCc-------------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 7532 2266899999999999999999999997
No 106
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.64 E-value=1.8e-15 Score=132.22 Aligned_cols=145 Identities=21% Similarity=0.345 Sum_probs=98.3
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCceeechhhHHHhhhccccCcccHHHHHH-HHHHHHHHHHHHHHHHHhcCC
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEE-LQKEEKEKHERQTLINLLTNH 88 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~~~~~~v~~~~~~~~p~~~~~~~~-l~~~~~~~~~~~~~~~~~g~~ 88 (311)
|.+.+.+|+++|+|+++|+++++. +|+.+...|. ...+.+.. +.... ......
T Consensus 74 d~~~~~~l~~~~~v~~~Pt~~~~~----~g~~~~~~g~------------~~~~~l~~~i~~~~----------~~~~~~ 127 (241)
T 3idv_A 74 DATSASVLASRFDVSGYPTIKILK----KGQAVDYEGS------------RTQEEIVAKVREVS----------QPDWTP 127 (241)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEEE----TTEEEECCSC------------SCHHHHHHHHHHHH----------STTCCC
T ss_pred eccCCHHHHHhcCCCcCCEEEEEc----CCCcccccCc------------ccHHHHHHHHhhcc----------Cccccc
Confidence 445567899999999999999997 5665533221 11111111 11100 000112
Q ss_pred CCCeEeeCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHH
Q 021505 89 DRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFES 168 (311)
Q Consensus 89 ~pdf~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~ 168 (311)
.+......++. .+...-..+++++|+||++||++|+.+.|.+.++++++..+ +.++.++.|+.+..
T Consensus 128 ~~~~~~~~~~~-~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-------~~~v~~~~vd~~~~------ 193 (241)
T 3idv_A 128 PPEVTLVLTKE-NFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR-------SPPIPLAKVDATAE------ 193 (241)
T ss_dssp CCCSSEECCTT-THHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS-------SSCCCEEEEETTTC------
T ss_pred ccccceeccHH-HHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc-------CCcEEEEEEECCCC------
Confidence 23333344554 44433335789999999999999999999999999999865 45688888877754
Q ss_pred HHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 169 YFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 169 ~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||+++++ +|+.+..
T Consensus 194 -----------------~~l~~~~~v~~~Pt~~~~~-~g~~~~~ 219 (241)
T 3idv_A 194 -----------------TDLAKRFDVSGYPTLKIFR-KGRPYDY 219 (241)
T ss_dssp -----------------HHHHHHTTCCSSSEEEEEE-TTEEEEC
T ss_pred -----------------HHHHHHcCCcccCEEEEEE-CCeEEEe
Confidence 4799999999999999995 6777654
No 107
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.63 E-value=2.1e-15 Score=119.57 Aligned_cols=90 Identities=14% Similarity=0.375 Sum_probs=74.2
Q ss_pred CCCCCeEeeCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHH
Q 021505 87 NHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 166 (311)
Q Consensus 87 ~~~pdf~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~ 166 (311)
.++|++. ..++. .++....+||+++|+||++||++|+.+.|.+.++++++++ ++.++.|++|..
T Consensus 22 ~~~~~~~-~~~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----------~v~~~~vd~d~~---- 85 (128)
T 3ul3_B 22 KKVPRLQ-QNGSN-IINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK----------RIYLLKVDLDKN---- 85 (128)
T ss_dssp ----CCC-CCCCS-SSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG----------GEEEEEEEGGGC----
T ss_pred ccCCccc-cCCcc-HHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CeEEEEEECCCC----
Confidence 3456655 45555 6778888999999999999999999999999999999875 478888887654
Q ss_pred HHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 167 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 167 ~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 86 -------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 111 (128)
T 3ul3_B 86 -------------------ESLARKFSVKSLPTIILL-KNKTMLAR 111 (128)
T ss_dssp -------------------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------------------HHHHHHcCCCCcCEEEEE-ECCEEEEE
Confidence 489999999999999999 78999887
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.63 E-value=2e-15 Score=121.40 Aligned_cols=84 Identities=23% Similarity=0.385 Sum_probs=74.4
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
+.+|. ...++.++||+++|+||++||++|+.+.|.|.++++++.+ ++.++.|++|.+
T Consensus 38 ~~~~~-~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~------------ 94 (141)
T 3hxs_A 38 DYENH-SKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG----------KIYIYKVNVDKE------------ 94 (141)
T ss_dssp CCSSC-CCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC------------
T ss_pred ccccc-hhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------ceEEEEEECCCC------------
Confidence 66777 8899999999999999999999999999999999998864 478888888764
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|++++++++|+++..
T Consensus 95 -----------~~~~~~~~v~~~Pt~~~~~~~g~~~~~ 121 (141)
T 3hxs_A 95 -----------PELARDFGIQSIPTIWFVPMKGEPQVN 121 (141)
T ss_dssp -----------HHHHHHTTCCSSSEEEEECSSSCCEEE
T ss_pred -----------HHHHHHcCCCCcCEEEEEeCCCCEEEE
Confidence 478999999999999999999998743
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.62 E-value=9.6e-16 Score=125.87 Aligned_cols=102 Identities=22% Similarity=0.384 Sum_probs=77.5
Q ss_pred cCCCCCeEeeCCCCceeeccccCCCEEEEEEe-cCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 86 TNHDRGYLLGHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 86 g~~~pdf~l~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
+...+++ +..++ .++++..+||+++|+|| |+||++|+.+.|.| .++.+.+.. ++.++.|+.+.
T Consensus 27 ~~~~~~~--~~~~~-~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~----------~~~~v~vd~~~ 93 (154)
T 2ju5_A 27 AAANLQW--ESYAE-ALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV----------HLHMVEVDFPQ 93 (154)
T ss_dssp CCCCCCE--ECHHH-HHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH----------HCEEEEEECCS
T ss_pred ccCCCCC--CCHHH-HHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC----------cEEEEEecCcc
Confidence 3344555 34455 77888889999999999 99999999999999 677655543 47788887765
Q ss_pred CHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 162 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.. . +.++ ..+....+.+.|+|.++|+++|+|++|+++.+
T Consensus 94 ~~--------~---~~~~-~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 94 KN--------H---QPEE-QRQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp SC--------C---CCHH-HHHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred cc--------C---CChh-hHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 43 0 1111 12346789999999999999999999999987
No 110
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.62 E-value=1.9e-16 Score=117.72 Aligned_cols=80 Identities=34% Similarity=0.692 Sum_probs=72.8
Q ss_pred cccCCCCcHHHHHHHHHHHHHHhccCCCcccccCc-cccceeeecCCCCCCcccccccCCCcceeEeCCCCCCCcccccc
Q 021505 222 QENAYPFTEAKLEFLEKQMEEEAKNLPRSEFHIGH-RHELNLVSEGTGGGPFICCDCDEQGSGWAYQCLECGYEVHPKCV 300 (311)
Q Consensus 222 g~~~~p~~~~~i~~L~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Cd~C~~~g~~w~~~C~~c~~~~h~~c~ 300 (311)
|+++||||++.+.+|++++.+.-..+|..+.+..| +|.|.|... .+++|+.|++.+.+|.|.|..|+|+||+.||
T Consensus 1 ~~~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~----~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca 76 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRV----QVYTCDKCEEEGTIWSYHCDECDFDLHAKCA 76 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEECC----SSCCCTTTSCCCCSCEEECTTTCCCCCHHHH
T ss_pred CCcccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEeeC----CCeEeCCCCCcCCCcEEEcCCCCCeEcHHhc
Confidence 67899999999999999999999999999999999 699999543 3799999999999999999999999999999
Q ss_pred ccccC
Q 021505 301 RAVDR 305 (311)
Q Consensus 301 ~~~~~ 305 (311)
+....
T Consensus 77 ~~p~~ 81 (89)
T 1v5n_A 77 LNEDT 81 (89)
T ss_dssp HCSSC
T ss_pred CCCCc
Confidence 87443
No 111
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.62 E-value=7.3e-16 Score=129.26 Aligned_cols=118 Identities=12% Similarity=0.126 Sum_probs=95.9
Q ss_pred hcCCCCCeEe---eC-------CCCceeecccc-CCCEE-EEEEecCCChhhHh-hhHHHHHHHHHHHhhhhhcCCCCCC
Q 021505 85 LTNHDRGYLL---GH-------PPDEKVPVSSL-VGKTV-GLYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALED 151 (311)
Q Consensus 85 ~g~~~pdf~l---~~-------~g~~~v~l~~~-~gk~v-ll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~~~ 151 (311)
+|+++|+.++ +. ++-++++++++ +||++ |++||+.|||.|.. ++|.+++.+++|+++ +
T Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~---------g 82 (176)
T 4f82_A 12 VGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA---------G 82 (176)
T ss_dssp TTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---------T
T ss_pred cCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC---------C
Confidence 6889999877 33 12238999997 99865 55667999999999 999999999999976 8
Q ss_pred e-EEEEEecCCCHHHHHHHHhcCCCc-ccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 152 F-EVVFVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 152 ~-~vv~Vs~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
+ +|++||.|. ....+++.++.+.. .+|++.|.+.++++.||+. ..|+++|| ++|+|++..
T Consensus 83 ~d~VigIS~D~-~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 83 IDEIWCVSVND-AFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp CCEEEEEESSC-HHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred CCEEEEEeCCC-HHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 8 999999985 45666777766632 4999999889999999983 24889999 999999874
No 112
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.61 E-value=8e-16 Score=134.52 Aligned_cols=86 Identities=26% Similarity=0.363 Sum_probs=69.0
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..+++ .+.....+|++++|+|||+||++|+.+.|.|.+++++++++ +.++.++.|+.|.+
T Consensus 19 ~l~~~-~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~~~~~~vd~~~~------------ 78 (241)
T 3idv_A 19 VLNDA-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDK-------DPPIPVAKIDATSA------------ 78 (241)
T ss_dssp EECTT-THHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-------SSCCCEEEEETTTC------------
T ss_pred Eeccc-CHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhc-------CCceEEEEEeccCC------------
Confidence 44444 45544457899999999999999999999999999999865 34577888877653
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||+++++ +|+++..
T Consensus 79 -----------~~l~~~~~v~~~Pt~~~~~-~g~~~~~ 104 (241)
T 3idv_A 79 -----------SVLASRFDVSGYPTIKILK-KGQAVDY 104 (241)
T ss_dssp -----------HHHHHHTTCCSSSEEEEEE-TTEEEEC
T ss_pred -----------HHHHHhcCCCcCCEEEEEc-CCCcccc
Confidence 4899999999999999994 6776643
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.58 E-value=6.2e-15 Score=117.37 Aligned_cols=77 Identities=27% Similarity=0.446 Sum_probs=66.2
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHH--HHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLL--SIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~--~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
..||+++|+||++||++|+.+.|.|. ++.+++.++ +.++.|+++.. +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~----------~~~~~vd~~~~--------------------~~ 76 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH----------FEVVKIDVGNF--------------------DR 76 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH----------CEEEEEECTTT--------------------TS
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC----------EEEEEEeCCcc--------------------cc
Confidence 45789999999999999999999999 999988753 78888888431 11
Q ss_pred HHHHHHhCCC---CccceEEEECCCCcEEEec
Q 021505 185 IKELTKYFDV---QGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 185 ~~~l~~~~~v---~~~Pt~vlid~~G~iv~~~ 213 (311)
...+++.|+| .++|+++++|++|+++.+.
T Consensus 77 ~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 77 NLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp SHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred hHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 5589999999 9999999999999999884
No 114
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.57 E-value=1.5e-14 Score=117.41 Aligned_cols=92 Identities=18% Similarity=0.317 Sum_probs=75.2
Q ss_pred cCCCCCeEe-eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 86 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 86 g~~~pdf~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
+.++++..+ +.++. .+......+|+++|+||++||++|+.+.|.|.++++++.. ++.++.|+.|..
T Consensus 32 ~~~~~~~~v~~l~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----------~~~~~~vd~~~~-- 98 (148)
T 3p2a_A 32 GHSLFDGEVINATAE-TLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG----------KVRFVKVNTEAE-- 98 (148)
T ss_dssp CCBTTCCCCEECCTT-THHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC--
T ss_pred CCccccCCceecCHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC----------ceEEEEEECcCC--
Confidence 344455555 66666 6655556789999999999999999999999999998864 478888887764
Q ss_pred HHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 165 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 165 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 99 ---------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 124 (148)
T 3p2a_A 99 ---------------------PALSTRFRIRSIPTIMLY-RNGKMIDM 124 (148)
T ss_dssp ---------------------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred ---------------------HHHHHHCCCCccCEEEEE-ECCeEEEE
Confidence 478999999999999999 69999876
No 115
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.56 E-value=1.7e-14 Score=111.16 Aligned_cols=71 Identities=24% Similarity=0.455 Sum_probs=62.4
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.++|+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. .
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-----------~~~~~~vd~~~~-----------------------~ 67 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-----------QADFYKLDVDEL-----------------------G 67 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------H
Confidence 358999999999999999999999999988764 478888887754 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|++++++ +|+++.+
T Consensus 68 ~l~~~~~v~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 68 DVAQKNEVSAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp HHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred HHHHHcCCCccCEEEEEE-CCEEEEE
Confidence 789999999999999996 9999887
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.56 E-value=1.7e-15 Score=126.24 Aligned_cols=102 Identities=19% Similarity=0.223 Sum_probs=66.2
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHH--HHHHhcCCC
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF--ESYFGTMPW 175 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~--~~~~~~~~~ 175 (311)
.+.++..+||+|+|+|||+||++|+.+.+.+ .++.+.+.+ ++.++.|++|...+.. ........+
T Consensus 39 ~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~----------~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN----------DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp HHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH----------HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred HHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----------CEEEEEEecCcccccchhhhhhhcchh
Confidence 3455556799999999999999999974444 455555544 3789999988653100 000001111
Q ss_pred cccccCchhHHHH-HHhCCCCccceEEEECCCCcEEEe
Q 021505 176 LALPFGDPTIKEL-TKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 176 ~~~p~~~d~~~~l-~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+....+....+ .+.|+|.++||++|||++|+++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 1111222222333 689999999999999999999887
No 117
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.56 E-value=8.2e-15 Score=122.51 Aligned_cols=117 Identities=12% Similarity=0.220 Sum_probs=95.2
Q ss_pred HhcCCCCCeEeeCCC--Cceeeccc-cCCCEEEEEEe-cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeE-EEEEe
Q 021505 84 LLTNHDRGYLLGHPP--DEKVPVSS-LVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE-VVFVS 158 (311)
Q Consensus 84 ~~g~~~pdf~l~~~g--~~~v~l~~-~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~-vv~Vs 158 (311)
.+|+.+|+|++..+| + ++++++ ++||+++|+|| +.|||.|..+++.+++.+++++++ +++ |++||
T Consensus 15 ~vGd~aPdf~l~~~g~~~-~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~---------gv~~VigIS 84 (171)
T 2xhf_A 15 KVGDIIPDVLVYEDVPSK-SFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE---------GYHTIACIA 84 (171)
T ss_dssp CTTCBCCCCEEECSSTTC-EEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred cCcCCCCCeEEecCCCCc-EEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 379999999995444 7 999999 59999999988 689999999999999999999976 785 99999
Q ss_pred cCCC--HHHHHHHHhcCCCcccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEec
Q 021505 159 TDRD--QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 159 ~d~~--~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~~ 213 (311)
.|.. ..+|.+...-. ..+|++.|.+.++++.||+. ....++||| +|+|++..
T Consensus 85 ~D~~~~~~~w~~~~~~~--~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 85 VNDPFVMAAWGKTVDPE--HKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp SSCHHHHHHHHHHHCTT--CCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred CCCHHHHHHHHHhcCCC--CCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 9974 33454443311 26899999899999999983 346889998 99999873
No 118
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.55 E-value=9.6e-15 Score=117.15 Aligned_cols=95 Identities=23% Similarity=0.465 Sum_probs=74.6
Q ss_pred cccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 105 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 105 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
+..+||+++|+||++||++|+.+.|.|.++++++. ++.++.|++|..
T Consensus 42 ~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~v~~~~~---------------------- 88 (139)
T 3d22_A 42 ASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-----------SLMFLVIDVDEL---------------------- 88 (139)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS----------------------
T ss_pred HhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEeCccc----------------------
Confidence 33568999999999999999999999999888763 588889888763
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEeccchhhhcccccCCCCcHHHHHHHHHHHHHHhccCCC
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLPR 249 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~~g~~~~~~~g~~~~p~~~~~i~~L~~~~~~~~~~~~~ 249 (311)
..+++.|+|.++|+++++ ++|+++.+ ..|. .. ++|.+.+++....+|.
T Consensus 89 -~~~~~~~~v~~~Pt~~~~-~~G~~~~~-------~~G~-----~~---~~l~~~l~~~~~~~~~ 136 (139)
T 3d22_A 89 -SDFSASWEIKATPTFFFL-RDGQQVDK-------LVGA-----NK---PELHKKITAILDSLPP 136 (139)
T ss_dssp -HHHHHHTTCCEESEEEEE-ETTEEEEE-------EESC-----CH---HHHHHHHHHHHHTSCT
T ss_pred -HHHHHHcCCCcccEEEEE-cCCeEEEE-------EeCC-----CH---HHHHHHHHHHhccCCC
Confidence 478999999999999999 89999877 3343 12 4455556665555554
No 119
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=1.5e-14 Score=114.54 Aligned_cols=81 Identities=19% Similarity=0.378 Sum_probs=66.1
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcc
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 177 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~ 177 (311)
.+.++..+||+++|+||++||++|+.+.|.+ ..+.+.+..+ +.++.|+.|.+.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~~-------------- 74 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH----------FVNLKMDMEKGE-------------- 74 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH----------SEEEEECSSSTT--------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC----------eEEEEEecCCcc--------------
Confidence 4555556799999999999999999999998 6666665543 566667666433
Q ss_pred cccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 178 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 178 ~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+++.|+|.++|+++++|++|+++.+
T Consensus 75 -------~~~~~~~~~v~~~Pt~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 75 -------GVELRKKYGVHAYPTLLFINSSGEVVYR 102 (130)
T ss_dssp -------HHHHHHHTTCCSSCEEEEECTTSCEEEE
T ss_pred -------hHHHHHHcCCCCCCEEEEECCCCcEEEE
Confidence 5689999999999999999999999987
No 120
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.54 E-value=3.1e-14 Score=116.26 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++|||+|||+||+||+.+.|.|.++++++.+ .+.|+-|++|.. .+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~----------~v~f~kVDVDe~-----------------------~e 86 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN----------FCVIYLVDITEV-----------------------PD 86 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT----------TEEEEEEETTTC-----------------------CT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC----------CcEEEEEECCCC-----------------------HH
Confidence 458999999999999999999999999999975 377888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
++..|+|.++||++++ .+|+.+.
T Consensus 87 ~a~~y~V~siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 87 FNTMYELYDPVSVMFF-YRNKHMM 109 (160)
T ss_dssp TTTTTTCCSSEEEEEE-ETTEEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCEEEE
Confidence 8999999999999999 7888873
No 121
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.54 E-value=1.5e-14 Score=112.71 Aligned_cols=71 Identities=24% Similarity=0.417 Sum_probs=62.1
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.++|+++|+||++||++|+.+.|.|.++++++. ++.++.|++|. ..
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~-----------------------~~ 74 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-----------NVIFLEVDVDD-----------------------CQ 74 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-----------TSEEEEEETTT-----------------------TH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCC-----------------------CH
Confidence 368999999999999999999999999887764 47888888775 34
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 75 ~l~~~~~v~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 75 DVASECEVKSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp HHHHHTTCCSSSEEEEE-SSSSEEEE
T ss_pred HHHHHcCCccccEEEEE-eCCeEEEE
Confidence 89999999999999999 88999877
No 122
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.53 E-value=6.1e-14 Score=108.38 Aligned_cols=71 Identities=27% Similarity=0.490 Sum_probs=63.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.+. +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~~~~~-----------------------~ 62 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD----------KLKIVKIDVDENQ-----------------------E 62 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT----------TCEEEEEETTTCC-----------------------S
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CcEEEEEECCCCH-----------------------H
Confidence 789999999999999999999999999998864 4889999887643 6
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (112)
T 2voc_A 63 TAGKYGVMSIPTLLVL-KDGEVVET 86 (112)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEE
Confidence 8899999999999999 99999877
No 123
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.53 E-value=8.2e-15 Score=122.22 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=64.6
Q ss_pred eccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCc
Q 021505 103 PVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 182 (311)
Q Consensus 103 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~ 182 (311)
.+++++||+++|+|||+||++|+.+.|.|.++++++. ++.|+.|+.|.
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-----------~v~~~~v~~d~--------------------- 95 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-----------NIELAIISKGR--------------------- 95 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEECHHH---------------------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CcEEEEEECCC---------------------
Confidence 4567789999999999999999999999999987653 57888887664
Q ss_pred hhHHHHHHhCC---CCccceEEEECCCCcEEEecc
Q 021505 183 PTIKELTKYFD---VQGIPCLVIIGPEGKTVTKQG 214 (311)
Q Consensus 183 d~~~~l~~~~~---v~~~Pt~vlid~~G~iv~~~g 214 (311)
..++.+.|+ +.++||++++|++|+++.+.|
T Consensus 96 --~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 96 --AEDDLRQRLALERIAIPLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp --HHHHTTTTTTCSSCCSSEEEEECTTCCEEEEEE
T ss_pred --CHHHHHHHHHcCCCCcCeEEEECCCCCEEEEEc
Confidence 335666675 999999999999999987643
No 124
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.53 E-value=7e-14 Score=112.00 Aligned_cols=71 Identities=28% Similarity=0.513 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.|.++++++.+ ++.++.|++|.+ ..
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~-----------------------~~ 83 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG----------QIVIYKVDTEKE-----------------------QE 83 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC----------CEEEEEEeCCCC-----------------------HH
Confidence 468999999999999999999999999988764 478888887764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
+++.|+|.++|+++++|++|+++.
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEM 107 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEE
T ss_pred HHHHcCCCCCCEEEEECCCCcEEE
Confidence 899999999999999999999874
No 125
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.52 E-value=8.9e-14 Score=120.54 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++.++ +..++.++.|+.|. ...
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~------~~~~v~~~~vd~~~-----------------------~~~ 183 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA------GKGKILGDMVEAIE-----------------------YPE 183 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT------TCCCEEEEEEEGGG-----------------------CHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc------cCCcEEEEEEEccc-----------------------CHH
Confidence 4456699999999999999999999999998731 01368888887764 347
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+.+.+
T Consensus 184 l~~~~~v~~~Pt~~~~-~~G~~~~~ 207 (226)
T 1a8l_A 184 WADQYNVMAVPKIVIQ-VNGEDRVE 207 (226)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHhCCCcccCeEEEE-eCCceeEE
Confidence 8999999999998888 68888766
No 126
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.52 E-value=1.8e-14 Score=109.93 Aligned_cols=83 Identities=20% Similarity=0.329 Sum_probs=68.5
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..+++ .+...-.++++++|+||++||++|+.+.|.+.++++++.+ .+.++.|+.|..
T Consensus 8 ~l~~~-~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~------------ 64 (109)
T 3tco_A 8 VLTEE-NFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG----------KAVFGRLNVDEN------------ 64 (109)
T ss_dssp ECCTT-THHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTTC------------
T ss_pred EecHH-HHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC----------CceEEEEccccC------------
Confidence 34444 4443334689999999999999999999999999998864 478888887764
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 65 -----------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 90 (109)
T 3tco_A 65 -----------QKIADKYSVLNIPTTLIF-VNGQLVDS 90 (109)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -----------HHHHHhcCcccCCEEEEE-cCCcEEEe
Confidence 478999999999999999 99999887
No 127
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.6e-14 Score=108.68 Aligned_cols=72 Identities=21% Similarity=0.556 Sum_probs=60.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.+.++++++... ++.++.|++|.+ ..
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~---------~~~~~~vd~~~~-----------------------~~ 67 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS---------NVSFLSIDADEN-----------------------SE 67 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT---------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC---------CEEEEEEecccC-----------------------HH
Confidence 4789999999999999999999999999886532 688888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 68 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 91 (112)
T 3d6i_A 68 ISELFEISAVPYFIII-HKGTILKE 91 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCEEEEE
Confidence 8999999999999999 79999887
No 128
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.51 E-value=6.5e-14 Score=107.76 Aligned_cols=74 Identities=22% Similarity=0.346 Sum_probs=61.5
Q ss_pred cccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 105 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 105 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
.+.+||+++|+||++||++|+.+.|.|.+++++++ ++.++.|+++..
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~~---------------------- 66 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE---------------------- 66 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-----------CeEEEEEecCcc----------------------
Confidence 34468999999999999999999999999888764 478888887632
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+++.|+|.++||++ ++++|+++.+
T Consensus 67 ~~~~~~~~~v~~~Pt~~-~~~~G~~~~~ 93 (111)
T 2pu9_C 67 NKTLAKELGIRVVPTFK-ILKENSVVGE 93 (111)
T ss_dssp THHHHHHHCCSBSSEEE-EESSSSEEEE
T ss_pred hHHHHHHcCCCeeeEEE-EEeCCcEEEE
Confidence 45889999999999955 5599999876
No 129
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.51 E-value=4.6e-14 Score=119.25 Aligned_cols=117 Identities=13% Similarity=0.183 Sum_probs=93.5
Q ss_pred hcCCCCCeEe-e--C---------CC----Cceeeccc-cCCCEEEEEEe-cCCChhhH-hhhHHHHHHHHHH-Hhhhhh
Q 021505 85 LTNHDRGYLL-G--H---------PP----DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKI-KQNLVE 144 (311)
Q Consensus 85 ~g~~~pdf~l-~--~---------~g----~~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~-~~~~~~ 144 (311)
+|+.+|+|++ + . +| + .+++++ ++||+++|+|| +.|||.|. .+++.+++.++++ +++
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~-~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~--- 78 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFT-SIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN--- 78 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEE-EEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS---
T ss_pred CCCCCCCeEEEcccccccccccccCCCccce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC---
Confidence 5889999999 5 3 66 6 899998 69999888887 68999999 9999999999999 765
Q ss_pred cCCCCCCe-EEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCC-----------ccceEEEECCCCcEEEe
Q 021505 145 KGDALEDF-EVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 145 ~~~~~~~~-~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~Pt~vlid~~G~iv~~ 212 (311)
++ .|++||.|... ..++|..+.....+|++.|.+.++++.||+. ..+.++||| +|+|++.
T Consensus 79 ------g~~~V~gvS~D~~~-~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~ 150 (182)
T 1xiy_A 79 ------NFDDIYCITNNDIY-VLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKM 150 (182)
T ss_dssp ------CCSEEEEEESSCHH-HHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEE
T ss_pred ------CCcEEEEEeCCCHH-HHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEE
Confidence 78 49999998743 3344444444226899999889999999973 257889998 9999987
Q ss_pred c
Q 021505 213 Q 213 (311)
Q Consensus 213 ~ 213 (311)
.
T Consensus 151 ~ 151 (182)
T 1xiy_A 151 F 151 (182)
T ss_dssp E
T ss_pred E
Confidence 4
No 130
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.51 E-value=1.3e-14 Score=126.27 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=54.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++++||++||++|+.+.|.+.++++++. ++.++.|+++. ...
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-----------~v~~~~vd~~~-----------------------~~~ 180 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-----------YITSKVIDASE-----------------------NQD 180 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEEGGG-----------------------CHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-----------CeEEEEEECCC-----------------------CHH
Confidence 45567999999999999999999999888762 57788887765 347
Q ss_pred HHHhCCCCccceEEEECCCCcE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+++.|+|.++|++++ +|++
T Consensus 181 l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 181 LAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp HHHHTTCCSSSEEEE---GGGT
T ss_pred HHHHcCCcccCEEEE---CCEE
Confidence 899999999999998 6764
No 131
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.51 E-value=1.2e-13 Score=121.99 Aligned_cols=75 Identities=15% Similarity=0.108 Sum_probs=60.5
Q ss_pred ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 106 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 106 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
++.|+++++.|||+||++|+.+.|.+.+++.++..+ ..+++.+..|+++..
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~------~~~~v~~~~vd~~~~----------------------- 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ------GNPVILSEAVEAYEN----------------------- 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT------TCCCEEEEEEETTTC-----------------------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc------cCCcEEEEEEECccC-----------------------
Confidence 466889999999999999999999999999988521 013688888876653
Q ss_pred HHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||+++ +|+++..
T Consensus 186 ~~~~~~~~V~~vPt~~i---~G~~~~~ 209 (243)
T 2hls_A 186 PDIADKYGVMSVPSIAI---NGYLVFV 209 (243)
T ss_dssp HHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred HHHHHHcCCeeeCeEEE---CCEEEEe
Confidence 47889999999999988 7887633
No 132
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.51 E-value=2.8e-14 Score=114.49 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=62.4
Q ss_pred CEEEEEEecCCC--hhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 110 KTVGLYFSARWC--IPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 110 k~vll~F~a~wC--~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|||+|||+|| ++|+.+.|.|.++.++|.+ .+.|+-|++|. +.+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~----------~v~~~KVdvDe-----------------------~~~ 80 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPG----------RLVAAEVAAEA-----------------------ERG 80 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT----------TEEEEEECGGG-----------------------HHH
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccC----------CcEEEEEECCC-----------------------CHH
Confidence 499999999999 9999999999999999875 47777777665 569
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.+|+|+++||++|+ ++|+++.+
T Consensus 81 la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 81 LMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp HHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred HHHHcCCccCCEEEEE-ECCEEEEE
Confidence 9999999999999999 99999998
No 133
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.50 E-value=1.2e-13 Score=105.63 Aligned_cols=70 Identities=14% Similarity=0.244 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.+.++++++. ++.++.|++|.. ..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 65 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-----------QAVFLEVDVHQC-----------------------QG 65 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------HH
Confidence 57899999999999999999999999988873 578888888764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 1gh2_A 66 TAATNNISATPTFQFF-RNKVRIDQ 89 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcccEEEEE-ECCeEEEE
Confidence 8999999999999999 88998876
No 134
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.50 E-value=1.2e-13 Score=108.95 Aligned_cols=71 Identities=27% Similarity=0.503 Sum_probs=61.8
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.++|+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. .
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~ 81 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-----------NVLFLKVDTDEL-----------------------K 81 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTS-----------------------H
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------H
Confidence 368999999999999999999999998888764 578888887653 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++++.|+|.++|+++++ ++|+++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFL-KEGKILDK 106 (124)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 78999999999998888 89999877
No 135
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.50 E-value=1.9e-14 Score=109.80 Aligned_cols=70 Identities=17% Similarity=0.287 Sum_probs=54.2
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++++++|+|||+||++|+.+.|.+.++++++. ++.++.|++|... .
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~~~~~-----------------------~ 62 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-----------YVEKIEILLQDMQ-----------------------E 62 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-----------TEEEEEEEECCC-------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-----------CceEEEEECCCCH-----------------------H
Confidence 57999999999999999999999999988763 5888888887643 7
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 4euy_A 63 IAGRYAVFTGPTVLLF-YNGKEILR 86 (105)
T ss_dssp -------CCCCEEEEE-ETTEEEEE
T ss_pred HHHhcCCCCCCEEEEE-eCCeEEEE
Confidence 8899999999999999 59999877
No 136
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.50 E-value=6.5e-14 Score=106.91 Aligned_cols=71 Identities=23% Similarity=0.510 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.+. .
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~~-----------------------~ 65 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG----------KLTVAKLNIDQNP-----------------------G 65 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTCT-----------------------T
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC----------CcEEEEEECCCCH-----------------------H
Confidence 578999999999999999999999999988764 4888888877643 6
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (108)
T 2trx_A 66 TAPKYGIRGIPTLLLF-KNGEVAAT 89 (108)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCcccCEEEEE-eCCEEEEE
Confidence 8899999999999999 89999876
No 137
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.50 E-value=8.2e-14 Score=112.22 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.|.++++++.+ .+.++.|++|.. ..
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~-----------------------~~ 69 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS----------SAVFGRINIATN-----------------------PW 69 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC----------ceEEEEEECCcC-----------------------Hh
Confidence 478999999999999999999999999999875 478888887764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 70 l~~~~~v~~~Pt~~~~-~~G~~~~~ 93 (140)
T 3hz4_A 70 TAEKYGVQGTPTFKFF-CHGRPVWE 93 (140)
T ss_dssp HHHHHTCCEESEEEEE-ETTEEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCcEEEE
Confidence 8999999999999999 88998876
No 138
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.50 E-value=3.5e-14 Score=116.02 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+|+|+|||+||++|+.+.|.|.++++++.+ .+.++.|++|.. .+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~----------~~~~~~vd~d~~-----------------------~~ 68 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK----------MAAIYLVDVDQT-----------------------AV 68 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT----------TEEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC----------ceEEEEEECCcC-----------------------HH
Confidence 478999999999999999999999999988764 388888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
+++.|+|.++||++++ ++|+++.
T Consensus 69 l~~~~~v~~~Pt~~~~-~~G~~v~ 91 (149)
T 3gix_A 69 YTQYFDISYIPSTVFF-FNGQHMK 91 (149)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred HHHHcCCCccCeEEEE-ECCeEEE
Confidence 8999999999999955 7899883
No 139
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.49 E-value=1.5e-13 Score=111.40 Aligned_cols=71 Identities=18% Similarity=0.271 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++|+|+|||+||++|+.+.|.|.++++++.+ ++.++.|++|... .
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~d~~~-----------------------~ 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN----------FAVIYLVDITEVP-----------------------D 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT----------TEEEEEEETTTCC-----------------------T
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CeEEEEEccccCH-----------------------H
Confidence 478999999999999999999999999998864 4888888887643 5
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ .+|+++.+
T Consensus 69 ~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 69 FNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp TTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 7889999999999999 68888865
No 140
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.49 E-value=6.7e-14 Score=106.24 Aligned_cols=71 Identities=21% Similarity=0.400 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++++++|+||++||++|+.+.|.+.++++++.+ .+.++.|++|.+ ..
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEG----------KADILKLDVDEN-----------------------PS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CcEEEEEECCcC-----------------------HH
Confidence 789999999999999999999999999998874 388888888764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 88 (106)
T 3die_A 65 TAAKYEVMSIPTLIVF-KDGQPVDK 88 (106)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHhCCCcccCEEEEE-eCCeEEEE
Confidence 8999999999999999 59998876
No 141
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.49 E-value=7.2e-14 Score=107.46 Aligned_cols=71 Identities=27% Similarity=0.483 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.+ .+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 68 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD----------KIEIVKLNIDEN-----------------------PG 68 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC----------CeEEEEEEcCCC-----------------------HH
Confidence 478999999999999999999999999988754 488888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 69 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 92 (112)
T 1t00_A 69 TAAKYGVMSIPTLNVY-QGGEVAKT 92 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCEEEEE
Confidence 8999999999999888 89999876
No 142
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.48 E-value=1.9e-14 Score=118.02 Aligned_cols=106 Identities=12% Similarity=0.172 Sum_probs=75.6
Q ss_pred ccCCCEEEEEEecCCChhhHhhhHHHHHHH--HHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCch
Q 021505 106 SLVGKTVGLYFSARWCIPCEKFMPKLLSIY--QKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDP 183 (311)
Q Consensus 106 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~--~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d 183 (311)
...||+|+|+|||+||++|+.+.|.+.+.. .++.+ ..++.|.+|.+.
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-----------~~fv~V~vD~e~-------------------- 89 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-----------NKFIMLNLMHET-------------------- 89 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-----------HTCEEEEESSCC--------------------
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-----------cCeEEEEecCCc--------------------
Confidence 346899999999999999999999887642 22222 126777776432
Q ss_pred hHHHHHHhCCCCccceEEEECCCCcEEEeccchhhhcccccCCCCcHHHHHHHHHHHHHHhccCC
Q 021505 184 TIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLP 248 (311)
Q Consensus 184 ~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~g~~~~~~~g~~~~p~~~~~i~~L~~~~~~~~~~~~ 248 (311)
..+...|++.++||++|++++|+++.+.. ...+...|.+....++++.+.+++..+.+.
T Consensus 90 --~~~~~~~~v~~~PT~~f~~~~G~~v~~~~----G~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 90 --TDKNLSPDGQYVPRIMFVDPSLTVRADIA----GRYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp --SCGGGCTTCCCSSEEEEECTTSCBCTTCC----CSCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred --hhhHhhcCCCCCCEEEEECCCCCEEEEEe----CCcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 12356789999999999999999988721 122344567777778888888887666554
No 143
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.48 E-value=1e-13 Score=105.59 Aligned_cols=71 Identities=24% Similarity=0.481 Sum_probs=62.2
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|+.|.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 64 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD----------KLKCVKLNTDES-----------------------PN 64 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC----------ceEEEEEECCCC-----------------------HH
Confidence 478999999999999999999999999988764 478888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 88 (107)
T 1dby_A 65 VASEYGIRSIPTIMVF-KGGKKCET 88 (107)
T ss_dssp HHHHHTCCSSCEEEEE-SSSSEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCEEEEE
Confidence 8999999999999888 79999876
No 144
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.48 E-value=1.9e-13 Score=111.84 Aligned_cols=70 Identities=10% Similarity=0.353 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. ..
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 76 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-----------QVSFVKLEAEGV-----------------------PE 76 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-----------CeEEEEEECCCC-----------------------HH
Confidence 48899999999999999999999999988763 588888887764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|++++++ +|+++.+
T Consensus 77 l~~~~~v~~~Pt~~~~~-~G~~~~~ 100 (153)
T 2wz9_A 77 VSEKYEISSVPTFLFFK-NSQKIDR 100 (153)
T ss_dssp HHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred HHHHcCCCCCCEEEEEE-CCEEEEE
Confidence 89999999999999998 9999877
No 145
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.48 E-value=2.3e-13 Score=103.22 Aligned_cols=71 Identities=27% Similarity=0.485 Sum_probs=62.8
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++.+++.+ ++.++.|++|.+ .+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~~-----------------------~~ 62 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD----------KVTVAKLNVDEN-----------------------PE 62 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CcEEEEEECcCC-----------------------HH
Confidence 578999999999999999999999999888764 478888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 63 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 1nsw_A 63 TTSQFGIMSIPTLILF-KGGRPVKQ 86 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCccccEEEEE-eCCeEEEE
Confidence 8999999999999999 89999876
No 146
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.48 E-value=9.8e-14 Score=108.45 Aligned_cols=71 Identities=25% Similarity=0.512 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.|.++++++.. ++.++.|++|.+ .+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~d~~-----------------------~~ 76 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG----------KVVMAKVDIDDH-----------------------TD 76 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------SSEEEEEETTTT-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCC-----------------------HH
Confidence 578999999999999999999999999888753 488888887763 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 77 l~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (119)
T 1w4v_A 77 LAIEYEVSAVPTVLAM-KNGDVVDK 100 (119)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCcEEEE
Confidence 8999999999999999 89999876
No 147
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.48 E-value=1.6e-13 Score=103.98 Aligned_cols=71 Identities=25% Similarity=0.451 Sum_probs=62.1
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.++|+++|+||++||++|+.+.|.+.++.++++ ++.++.|+.|.. .
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~ 63 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-----------NVIFLEVDVDDC-----------------------Q 63 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-----------TSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-----------CeEEEEEEhhhh-----------------------H
Confidence 367899999999999999999999999888764 478888887754 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 64 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 88 (105)
T 3m9j_A 64 DVASESEVKSMPTFQFF-KKGQKVGE 88 (105)
T ss_dssp HHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcCcEEEEE-ECCeEEEE
Confidence 78999999999999999 88998876
No 148
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.48 E-value=1.3e-13 Score=107.83 Aligned_cols=71 Identities=28% Similarity=0.464 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.|.++++++ . ++.++.|++|.. ..
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~----------~v~~~~vd~~~~-----------------------~~ 67 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K----------DVTFIKVDVDKN-----------------------GN 67 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C----------CeEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999998887 3 588888888764 37
Q ss_pred HHHhCCCCccceEEEECC---CCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGP---EGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~---~G~iv~~ 212 (311)
+++.|+|.++|++++++. +|+++.+
T Consensus 68 ~~~~~~i~~~Pt~~~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 68 AADAYGVSSIPALFFVKKEGNEIKTLDQ 95 (118)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred HHHhcCCCCCCEEEEEeCCCCcceEEEe
Confidence 899999999999999965 4888877
No 149
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=7.4e-14 Score=111.69 Aligned_cols=74 Identities=19% Similarity=0.353 Sum_probs=57.9
Q ss_pred ccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCch
Q 021505 104 VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDP 183 (311)
Q Consensus 104 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d 183 (311)
+++.+||+++|+|||+||++|+.+.|.|.++.+++ ++.++.|++|.
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~------------~v~~~~vd~~~---------------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY------------YVTLVDIDVDI---------------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE------------ECEEEEEETTT----------------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc------------CEEEEEEeccc----------------------
Confidence 45567899999999999999999999887766543 25566666554
Q ss_pred hHHHHHHhCCCCccceEEEE-CCCCc--EEEe
Q 021505 184 TIKELTKYFDVQGIPCLVII-GPEGK--TVTK 212 (311)
Q Consensus 184 ~~~~l~~~~~v~~~Pt~vli-d~~G~--iv~~ 212 (311)
...+++.|+|.++|+++++ +++|+ ++.+
T Consensus 81 -~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~ 111 (133)
T 3cxg_A 81 -HPKLNDQHNIKALPTFEFYFNLNNEWVLVHT 111 (133)
T ss_dssp -CHHHHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred -hHHHHHhcCCCCCCEEEEEEecCCCeEEEEE
Confidence 4478999999999999999 44665 7776
No 150
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.48 E-value=1.4e-13 Score=105.51 Aligned_cols=71 Identities=25% Similarity=0.520 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++.+++.+ ++.++.|++|.. ..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~----------~v~~~~vd~~~~-----------------------~~ 67 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE----------SFGFYYVDVEEE-----------------------KT 67 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC----------ceEEEEEECCcC-----------------------hh
Confidence 468999999999999999999999999988764 488888888764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 68 l~~~~~v~~~Pt~~~~-~~g~~~~~ 91 (111)
T 3gnj_A 68 LFQRFSLKGVPQILYF-KDGEYKGK 91 (111)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEE
Confidence 8999999999999999 78998876
No 151
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.47 E-value=4.4e-14 Score=113.74 Aligned_cols=72 Identities=7% Similarity=0.077 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCC--ChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 108 VGKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 108 ~gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
.+++|||+|||+| |++|+.+.|.|.++.++|.++ .+.|+-|++|. +
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~---------~v~~~KVdvDe-----------------------~ 80 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY---------TWQVAIADLEQ-----------------------S 80 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS---------CCEEEECCHHH-----------------------H
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC---------eEEEEEEECCC-----------------------C
Confidence 4567999999999 999999999999999988642 27777776664 6
Q ss_pred HHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.+|+|.++||++|+ ++|+++.+
T Consensus 81 ~~lA~~ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 81 EAIGDRFGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 699999999999999999 99999988
No 152
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.47 E-value=2e-13 Score=109.29 Aligned_cols=84 Identities=27% Similarity=0.400 Sum_probs=65.8
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..++. .+...-..+|+++|+||++||++|+.+.|.|.++++++.++ +.++.++.|+++.
T Consensus 21 ~l~~~-~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~v~~~~vd~~~------------- 79 (140)
T 2dj1_A 21 VLNDG-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDN-------DPPIAVAKIDATS------------- 79 (140)
T ss_dssp ECCTT-THHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSS-------SSCCEEEEECTTT-------------
T ss_pred EcChH-hHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCceEEEEEeCcc-------------
Confidence 44444 44433346799999999999999999999999999999864 3346676666554
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEE
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
...+++.|+|.++|+++++ ++|++.
T Consensus 80 ----------~~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 80 ----------ASMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp ----------CHHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred ----------cHHHHHHCCCCccCeEEEE-ECCcEE
Confidence 3478999999999999999 788843
No 153
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.21 E-value=3.5e-15 Score=118.28 Aligned_cols=83 Identities=25% Similarity=0.497 Sum_probs=68.6
Q ss_pred CCceeeccccCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 98 PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 98 g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
.+ .+.++..+||+++|+||++||++|+.+.|.+ .++.+.+.. ++.++.|++|.+.
T Consensus 9 ~~-~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~----------~~~~~~vd~~~~~----------- 66 (130)
T 2lst_A 9 PE-ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA----------RFVVASVSVDTPE----------- 66 (130)
Confidence 44 7888888999999999999999999999999 788777654 3677777765433
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECC-CCcE--EEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGP-EGKT--VTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~-~G~i--v~~ 212 (311)
...+++.|+|.++|+++|+|+ +|++ +.+
T Consensus 67 ----------~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~ 97 (130)
T 2lst_A 67 ----------GQELARRYRVPGTPTFVFLVPKAGAWEEVGR 97 (130)
Confidence 467899999999999999996 5888 665
No 154
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.47 E-value=1.9e-13 Score=108.09 Aligned_cols=72 Identities=24% Similarity=0.424 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ .+.++.|++|.. ..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~ 80 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD----------VVKVGAVNADKH-----------------------QS 80 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC----------ceEEEEEeCCCC-----------------------HH
Confidence 478999999999999999999999999988764 377888887653 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|++++++++|+++.+
T Consensus 81 l~~~~~v~~~Pt~~~~~~~~~~~~~ 105 (130)
T 2dml_A 81 LGGQYGVQGFPTIKIFGANKNKPED 105 (130)
T ss_dssp HHHHHTCCSSSEEEEESSCTTSCEE
T ss_pred HHHHcCCCccCEEEEEeCCCCeEEE
Confidence 8999999999999999988874443
No 155
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.47 E-value=1.4e-13 Score=106.00 Aligned_cols=71 Identities=24% Similarity=0.502 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++.+++.+ ++.++.|++|.+ ..
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~~-----------------------~~ 70 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD----------RLKVVKLEIDPN-----------------------PT 70 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT----------TCEEEEEESTTC-----------------------HH
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC----------cEEEEEEEcCCC-----------------------HH
Confidence 578999999999999999999999999988764 488999988764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (115)
T 1thx_A 71 TVKKYKVEGVPALRLV-KGEQILDS 94 (115)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCceeEEEEE-cCCEEEEE
Confidence 8999999999999999 99999876
No 156
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.47 E-value=6.6e-14 Score=111.23 Aligned_cols=71 Identities=21% Similarity=0.458 Sum_probs=62.8
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.+. +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~~~~~-----------------------~ 85 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG----------KLTVAKLNIDQNP-----------------------G 85 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT----------TEEEEEEETTTCC-----------------------T
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CeEEEEEECCCCH-----------------------H
Confidence 579999999999999999999999999988764 4888888887643 5
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 86 l~~~~~v~~~Pt~~~~-~~G~~~~~ 109 (128)
T 2o8v_B 86 TAPKYGIRGIPTLLLF-KNGEVAAT 109 (128)
T ss_dssp TSGGGTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCccCEEEEE-eCCEEEEE
Confidence 7889999999999999 99999876
No 157
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.47 E-value=9.5e-15 Score=121.31 Aligned_cols=80 Identities=18% Similarity=0.362 Sum_probs=63.2
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCccccc
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 180 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~ 180 (311)
.+..+..+||+|+|+|||+||++|+.+.|.|.++.+.+... +.|+.|++|.+.+
T Consensus 38 ~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~----------~~~~~v~~d~~~~---------------- 91 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS----------HNFVMVNLEDEEE---------------- 91 (164)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH----------TTSEEEEEEGGGS----------------
T ss_pred HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC----------CeEEEEEecCCch----------------
Confidence 56666678999999999999999999999999977665442 5577887775431
Q ss_pred CchhHHHHHHhCCC--CccceEEEECCCCcEEEe
Q 021505 181 GDPTIKELTKYFDV--QGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 181 ~~d~~~~l~~~~~v--~~~Pt~vlid~~G~iv~~ 212 (311)
.+...|++ .++||++|+|++|+++.+
T Consensus 92 ------~~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 92 ------PKDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp ------CSCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred ------HHHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 14456777 669999999999999876
No 158
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.47 E-value=2.5e-13 Score=107.48 Aligned_cols=71 Identities=21% Similarity=0.396 Sum_probs=62.1
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
-++++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. .
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~ 80 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-----------TVKFAKVDADNN-----------------------S 80 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------H
Confidence 367899999999999999999999999888763 588888888764 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++++.|+|.++||++++ ++|+++.+
T Consensus 81 ~l~~~~~v~~~Pt~~i~-~~G~~~~~ 105 (125)
T 1r26_A 81 EIVSKCRVLQLPTFIIA-RSGKMLGH 105 (125)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcccEEEEE-eCCeEEEE
Confidence 78999999999998888 89999876
No 159
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.47 E-value=1.1e-13 Score=113.69 Aligned_cols=71 Identities=18% Similarity=0.479 Sum_probs=63.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.|.++++++.+ ++.++.|++|.+ ..
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~----------~v~~~~vd~~~~-----------------------~~ 109 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG----------QVRLAKIDTQAH-----------------------PA 109 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TCEEEEEETTTS-----------------------TH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC----------CEEEEEEeCCcc-----------------------HH
Confidence 578999999999999999999999999999874 478888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 110 l~~~~~i~~~Pt~~~~-~~G~~~~~ 133 (155)
T 2ppt_A 110 VAGRHRIQGIPAFILF-HKGRELAR 133 (155)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcCCEEEEE-eCCeEEEE
Confidence 8999999999999999 79999876
No 160
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.2e-13 Score=107.87 Aligned_cols=75 Identities=17% Similarity=0.394 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++++++.... ..++.++.|++|.+ ..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~~vd~~~~-----------------------~~ 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT------KGKVKLAAVDATVN-----------------------QV 74 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT------TTSEEEEEEETTTC-----------------------CH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc------CCcEEEEEEECCCC-----------------------HH
Confidence 47899999999999999999999999999987310 13588888877653 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++++ |+++.+
T Consensus 75 l~~~~~v~~~Pt~~~~~~-g~~~~~ 98 (133)
T 1x5d_A 75 LASRYGIRGFPTIKIFQK-GESPVD 98 (133)
T ss_dssp HHHHHTCCSSSEEEEEET-TEEEEE
T ss_pred HHHhCCCCeeCeEEEEeC-CCceEE
Confidence 899999999999999976 877665
No 161
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.46 E-value=2.9e-13 Score=103.90 Aligned_cols=70 Identities=17% Similarity=0.419 Sum_probs=61.4
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
+|+++|+||++||++|+.+.|.|.++.+++.+ ++.++.|+.|. ...+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~-----------------------~~~~ 70 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG----------KVIFLKVDVDA-----------------------VAAV 70 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTT-----------------------THHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC----------CeEEEEEECCc-----------------------hHHH
Confidence 78999999999999999999999999888753 57888888775 3478
Q ss_pred HHhCCCCccceEEEECCCCcEEEe
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~v~~~Pt~~~~-~~G~~~~~ 93 (112)
T 1ep7_A 71 AEAAGITAMPTFHVY-KDGVKADD 93 (112)
T ss_dssp HHHHTCCBSSEEEEE-ETTEEEEE
T ss_pred HHHcCCCcccEEEEE-ECCeEEEE
Confidence 999999999998887 89999876
No 162
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.46 E-value=2.1e-13 Score=103.60 Aligned_cols=71 Identities=30% Similarity=0.530 Sum_probs=63.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++.+++.+ ++.++.|++|.+ ..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 65 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG----------KVTVAKVNIDDN-----------------------PE 65 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------SEEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC----------cEEEEEEECCCC-----------------------HH
Confidence 578999999999999999999999999998864 588888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 2i4a_A 66 TPNAYQVRSIPTLMLV-RDGKVIDK 89 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCccCEEEEE-eCCEEEEE
Confidence 8999999999999999 99999876
No 163
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.45 E-value=3.3e-13 Score=104.88 Aligned_cols=70 Identities=26% Similarity=0.528 Sum_probs=61.2
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
+||+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ .+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-----------~v~~~~vd~~~~-----------------------~~ 74 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-----------DVRFVKCDVDES-----------------------PD 74 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888764 478888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 75 l~~~~~v~~~Pt~~~~-~~G~~~~~ 98 (114)
T 2oe3_A 75 IAKECEVTAMPTFVLG-KDGQLIGK 98 (114)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHCCCCcccEEEEE-eCCeEEEE
Confidence 8999999999999887 89999876
No 164
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.45 E-value=2.5e-13 Score=106.59 Aligned_cols=73 Identities=23% Similarity=0.435 Sum_probs=61.3
Q ss_pred ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 106 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 106 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
+.+||+++|+||++||++|+.+.|.+.+++++++ ++.++.|+.+.. .
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~----------------------~ 80 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE----------------------N 80 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------T
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-----------CCEEEEEecCcc----------------------h
Confidence 3478999999999999999999999999888764 477888877632 3
Q ss_pred HHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||++++ ++|+++.+
T Consensus 81 ~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1faa_A 81 KTLAKELGIRVVPTFKIL-KENSVVGE 106 (124)
T ss_dssp HHHHHHHCCSSSSEEEEE-ETTEEEEE
T ss_pred HHHHHHcCCCeeeEEEEE-eCCcEEEE
Confidence 578999999999996666 89999877
No 165
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.45 E-value=4.7e-13 Score=104.56 Aligned_cols=70 Identities=26% Similarity=0.536 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.|.++.+++. ++.++.|++|.+ ..
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 78 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-----------NAVFLKVDVDEL-----------------------KP 78 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888764 478888888764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 79 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 102 (122)
T 2vlu_A 79 IAEQFSVEAMPTFLFM-KEGDVKDR 102 (122)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEE
Confidence 8999999999998888 89999876
No 166
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=3.4e-13 Score=106.14 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=64.1
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..++. .+. ..+++ .++|+||++||++|+.+.|.|.++++++.+. ++.++.|++|.+
T Consensus 11 ~l~~~-~f~-~~~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~---------~v~~~~vd~~~~------------ 66 (126)
T 1x5e_A 11 VITDE-NWR-ELLEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDL---------EVNIAKVDVTEQ------------ 66 (126)
T ss_dssp ECCTT-THH-HHTSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEETTTC------------
T ss_pred EecHH-HHH-HHhCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccC---------CeEEEEEECcCC------------
Confidence 44444 443 12344 4999999999999999999999999988753 588888887764
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEE
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
..+++.|+|.++||++++ ++|++.
T Consensus 67 -----------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 -----------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred -----------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 378999999999999999 889863
No 167
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.44 E-value=4.5e-13 Score=105.79 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=66.5
Q ss_pred eCCCCceeecccc-CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcC
Q 021505 95 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 173 (311)
Q Consensus 95 ~~~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~ 173 (311)
..++. .+...-. .+++++|+|||+||++|+.+.|.+.++++++..+ ....++.++.|++|.
T Consensus 19 ~l~~~-~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-----~~~~~v~~~~vd~~~------------ 80 (127)
T 3h79_A 19 ELTDE-TFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK-----RNHLTFVAARIDGEK------------ 80 (127)
T ss_dssp ECCTT-THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-----TTTTTEEEEEEETTT------------
T ss_pred ECChh-hHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc-----ccCCCeEEEEEEccc------------
Confidence 55555 4443332 4799999999999999999999999999988632 002467788887765
Q ss_pred CCcccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 174 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 174 ~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
...+++.|+|.++||++++++++++
T Consensus 81 -----------~~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 81 -----------YPDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -----------CHHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -----------cHhHHHhcCCccCCEEEEEeCCCCC
Confidence 3489999999999999999766653
No 168
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.44 E-value=5e-13 Score=102.21 Aligned_cols=73 Identities=22% Similarity=0.455 Sum_probs=61.8
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
+++++|+||++||++|+.+.|.+.++.+++... ..++.++.|+.|.. ..+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~~~~~~vd~~~~-----------------------~~l 70 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-------LAGVKIAEVDCTAE-----------------------RNI 70 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC--------CCEEEEEEETTTC-----------------------HHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc-------CCceEEEEEecccc-----------------------HhH
Confidence 789999999999999999999999998876532 24688888877754 478
Q ss_pred HHhCCCCccceEEEECCCCcEEEe
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~v~~~Pt~~~~-~~g~~~~~ 93 (111)
T 3uvt_A 71 CSKYSVRGYPTLLLF-RGGKKVSE 93 (111)
T ss_dssp HHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHhcCCCcccEEEEE-eCCcEEEe
Confidence 999999999999999 78888876
No 169
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.3e-13 Score=110.43 Aligned_cols=75 Identities=20% Similarity=0.343 Sum_probs=62.6
Q ss_pred ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 106 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 106 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
.-++++++|+|||+||++|+.+.|.|.++++++.+. ++.++.|++|..
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~---------~v~~~~vd~~~~----------------------- 70 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT---------GLNFGKVDVGRY----------------------- 70 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS---------SCEEEECCTTTC-----------------------
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---------CeEEEEEeCccC-----------------------
Confidence 345679999999999999999999999999998632 577777766553
Q ss_pred HHHHHhCCCC------ccceEEEECCCCcEEEec
Q 021505 186 KELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 186 ~~l~~~~~v~------~~Pt~vlid~~G~iv~~~ 213 (311)
..+++.|+|. ++||++++ ++|+++.+.
T Consensus 71 ~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~ 103 (137)
T 2dj0_A 71 TDVSTRYKVSTSPLTKQLPTLILF-QGGKEAMRR 103 (137)
T ss_dssp HHHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEEE
T ss_pred HHHHHHccCcccCCcCCCCEEEEE-ECCEEEEEe
Confidence 4788999998 99999999 789998763
No 170
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.44 E-value=9e-13 Score=99.89 Aligned_cols=72 Identities=28% Similarity=0.581 Sum_probs=62.4
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.++++++|+||++||++|+.+.|.+.++.++++. ++.++.|+.|.. .
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~ 64 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD----------NVVVLKVDVDEC-----------------------E 64 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------H
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC----------CeEEEEEeccch-----------------------H
Confidence 4688999999999999999999999999888753 588888887753 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (106)
T 1xwb_A 65 DIAMEYNISSMPTFVFL-KNGVKVEE 89 (106)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcccEEEEE-cCCcEEEE
Confidence 78999999999998888 78998876
No 171
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.43 E-value=6.7e-13 Score=100.26 Aligned_cols=71 Identities=30% Similarity=0.631 Sum_probs=61.3
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
..+++++|+||++||++|+.+.|.+.++.+++. ++.++.|+.|.. .
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~ 62 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-----------EVEFAKVDVDQN-----------------------E 62 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-----------CCEEEEEeccCC-----------------------H
Confidence 467899999999999999999999999888764 578888888753 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 63 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (104)
T 2vim_A 63 EAAAKYSVTAMPTFVFI-KDGKEVDR 87 (104)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCccccEEEEE-eCCcEEEE
Confidence 78999999999998888 58998877
No 172
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.43 E-value=3.2e-13 Score=104.89 Aligned_cols=72 Identities=26% Similarity=0.537 Sum_probs=60.7
Q ss_pred cccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 105 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 105 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
++.+||+++|+||++||++|+.+.|.+.++++++ ++.++.|+.|.
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~------------~~~~~~vd~~~----------------------- 73 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY------------DAIFVKVDVDK----------------------- 73 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS------------SSEEEEEETTT-----------------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc------------CcEEEEEECCc-----------------------
Confidence 3447899999999999999999999998877655 36788887765
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+++.|+|.++|+++++ ++|+++.+
T Consensus 74 ~~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (117)
T 2xc2_A 74 LEETARKYNISAMPTFIAI-KNGEKVGD 100 (117)
T ss_dssp SHHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred cHHHHHHcCCCccceEEEE-eCCcEEEE
Confidence 3478999999999998888 79999876
No 173
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.43 E-value=3.9e-13 Score=101.75 Aligned_cols=71 Identities=20% Similarity=0.438 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+.|.+ ..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 63 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG----------KIAVYKLNTDEA-----------------------PG 63 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC----------ceEEEEEcCcch-----------------------HH
Confidence 478999999999999999999999999888764 478888887764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (105)
T 1fb6_A 64 IATQYNIRSIPTVLFF-KNGERKES 87 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCeEEEE
Confidence 8999999999998888 79999876
No 174
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.43 E-value=6.3e-13 Score=102.09 Aligned_cols=71 Identities=25% Similarity=0.548 Sum_probs=61.6
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
..|++++|+||++||++|+.+.|.+.++.+++. ++.++.|+.|.. .
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 69 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-----------NVTFLKVDVDEL-----------------------K 69 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTC-----------------------H
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-----------CcEEEEEEcccc-----------------------H
Confidence 358899999999999999999999998887764 578888887754 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 70 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 70 AVAEEWNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp HHHHHHHCSSTTEEEEE-ETTEEEEE
T ss_pred HHHHhCCCCcccEEEEE-eCCEEEEE
Confidence 78999999999999999 79999877
No 175
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=1.6e-13 Score=108.91 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=63.5
Q ss_pred eCCCCceeecccc-CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcC
Q 021505 95 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 173 (311)
Q Consensus 95 ~~~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~ 173 (311)
..++. .+..... .+++++|+||++||++|+.+.|.|.++++++..+ .++.++.|+.+..
T Consensus 11 ~l~~~-~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--------~~~~~~~vd~~~~----------- 70 (133)
T 2dj3_A 11 VVVGK-TFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ--------KDLVIAKMDATAN----------- 70 (133)
T ss_dssp ECCTT-TCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS--------SSEEEEEECTTTS-----------
T ss_pred EEcCC-CHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--------CCEEEEEecCCcC-----------
Confidence 55555 5554433 4899999999999999999999999999998742 2566666665542
Q ss_pred CCcccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 174 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 174 ~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
..+++.|+|.++||+++++++|++
T Consensus 71 ------------~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 71 ------------DITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ------------CCCCSSCCCSSSSEEEEECTTCTT
T ss_pred ------------HHHHhhcCCCcCCEEEEEeCCCcc
Confidence 245678999999999999876653
No 176
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.43 E-value=4.4e-13 Score=100.93 Aligned_cols=70 Identities=17% Similarity=0.458 Sum_probs=61.5
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++++++|+||++||++|+.+.|.+.++.+++. ++.++.|+.|.+ ..
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 60 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-----------QVGFGKLNSDEN-----------------------PD 60 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC-----------CceEEEEECCCC-----------------------HH
Confidence 57899999999999999999999998887764 478888888764 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 61 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 84 (104)
T 2e0q_A 61 IAARYGVMSLPTVIFF-KDGEPVDE 84 (104)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHhCCccccCEEEEE-ECCeEhhh
Confidence 8999999999999999 89999876
No 177
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.43 E-value=2e-13 Score=114.34 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=60.1
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHH---HHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcc
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPK---LLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 177 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~---l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~ 177 (311)
.+..+..+||+|+|+|||+||++|+.+.+. ..++.+.+.+. +.++.|+.|...+-...|..
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~----------fv~ikVD~de~~~l~~~y~~------ 94 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA----------FVSIKVDREERPDIDNIYMT------ 94 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH----------CEEEEEETTTCHHHHHHHHH------
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc----------CceeeeCCcccCcHHHHHHH------
Confidence 444555578999999999999999999883 24566666543 55566655544322111111
Q ss_pred cccCchhHHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 178 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 178 ~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
.+...+|+.++|+++|++++|+++...
T Consensus 95 ---------~~q~~~gv~g~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 95 ---------VCQIILGRGGWPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp ---------HHHHHHSCCCSSEEEEECTTSCEEEEE
T ss_pred ---------HHHHHcCCCCCcceeeECCCCCceeee
Confidence 122235999999999999999999863
No 178
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.42 E-value=4e-13 Score=105.32 Aligned_cols=72 Identities=21% Similarity=0.434 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.|.++++++..+ ++.++.|++|.. ..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~~~~vd~d~~-----------------------~~ 79 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD---------KVGFYKVDVDEQ-----------------------SQ 79 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH---------HSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC---------cEEEEEEECcCC-----------------------HH
Confidence 5789999999999999999999999999888754 488888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 80 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp HHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCeEEee
Confidence 8999999999999999 69999877
No 179
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.42 E-value=8.5e-13 Score=102.12 Aligned_cols=70 Identities=27% Similarity=0.559 Sum_probs=61.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.||+++|+||++||++|+.+.|.|.++.+++. ++.++.|+.|.. ..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 72 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-----------GAIFLKVDVDEL-----------------------KD 72 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-----------CcEEEEEEcccC-----------------------HH
Confidence 47899999999999999999999999888764 478888887653 47
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 96 (118)
T 2vm1_A 73 VAEAYNVEAMPTFLFI-KDGEKVDS 96 (118)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcCcEEEEE-eCCeEEEE
Confidence 8999999999999998 89999876
No 180
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.42 E-value=2.8e-13 Score=103.04 Aligned_cols=71 Identities=24% Similarity=0.468 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++.+++.+ ++.++.|++|.+ ..
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 63 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG----------KLLVAKLDVDEN-----------------------PK 63 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT----------TBEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC----------ceEEEEEECCCC-----------------------Hh
Confidence 478999999999999999999999999888764 488888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (109)
T 2yzu_A 64 TAMRYRVMSIPTVILF-KDGQPVEV 87 (109)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcCCEEEEE-eCCcEeee
Confidence 8999999999999999 89999876
No 181
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.42 E-value=3.6e-13 Score=105.22 Aligned_cols=69 Identities=19% Similarity=0.298 Sum_probs=60.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.. .+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~ 66 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG----------KVRAGKVDCQAY-----------------------PQ 66 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEeCcCC-----------------------HH
Confidence 468999999999999999999999999998864 478888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+++.|+|.++|++++++++|++
T Consensus 67 ~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 67 TCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp HHHHTTCCSSSEEEEEEEEGGG
T ss_pred HHHHcCCCccceEEEEeCCCcc
Confidence 8999999999999999877763
No 182
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.41 E-value=8e-13 Score=101.90 Aligned_cols=70 Identities=21% Similarity=0.417 Sum_probs=60.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
+||+++|+||++||++|+.+.|.+.++++++. ++.++.|++|.. ..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 70 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-----------KMVFIKVDVDEV-----------------------SE 70 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTT-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-----------CCEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888764 578888887764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (112)
T 1syr_A 71 VTEKENITSMPTFKVY-KNGSSVDT 94 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCcEEEE
Confidence 8999999999998887 69998876
No 183
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.41 E-value=3.3e-13 Score=116.18 Aligned_cols=83 Identities=17% Similarity=0.245 Sum_probs=67.7
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
+.++. .+.....+|++++|+||++||++|+.+.|.+.++++++.+ .+.++.|++|..
T Consensus 101 ~l~~~-~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----------~v~~~~vd~~~~------------ 157 (210)
T 3apq_A 101 TLERR-EFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG----------LLRIGAVNCGDD------------ 157 (210)
T ss_dssp ECCHH-HHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT----------TBEEEEEETTTC------------
T ss_pred EecHH-HHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC----------ceEEEEEECCcc------------
Confidence 33444 3433335789999999999999999999999999988864 488888887764
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||++++ ++|+++.+
T Consensus 158 -----------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 183 (210)
T 3apq_A 158 -----------RMLCRMKGVNSYPSLFIF-RSGMAAVK 183 (210)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-CTTSCCEE
T ss_pred -----------HHHHHHcCCCcCCeEEEE-ECCCceeE
Confidence 378999999999999999 89998766
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.40 E-value=4.1e-13 Score=120.70 Aligned_cols=72 Identities=19% Similarity=0.374 Sum_probs=63.9
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
.+||+|+|+||++||++|+.+.|.+.++++++++ ++.|+.|++|.+ .
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~----------~~~~~~vd~~~~-----------------------~ 70 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG----------QFILAKLDCDAE-----------------------Q 70 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS----------SSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC----------CeEEEEEeCccC-----------------------H
Confidence 3589999999999999999999999999999874 488888888764 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++||++++ ++|+++.+
T Consensus 71 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 95 (287)
T 3qou_A 71 MIAAQFGLRAIPTVYLF-QNGQPVDG 95 (287)
T ss_dssp HHHHTTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCCCCeEEEE-ECCEEEEE
Confidence 89999999999999999 79999875
No 185
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.40 E-value=1e-12 Score=102.27 Aligned_cols=75 Identities=16% Similarity=0.397 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.|++++|+|||+||++|+.+.|.|.++++++. ..+++++++.... .+....
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~------------~~v~~~~~~~~~~-----------------~~~~~~ 78 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK------------AHIYFINSEEPSQ-----------------LNDLQA 78 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC------------CCCEEEETTCGGG-----------------HHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC------------CeEEEEECCCcCc-----------------HHHHHH
Confidence 46899999999999999999999999988764 2367777765321 012457
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 79 ~~~~~~i~~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 79 FRSRYGIPTVPGFVHI-TDGQINVR 102 (118)
T ss_dssp HHHHHTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHHcCCCCCCeEEEE-ECCEEEEE
Confidence 8899999999999999 58998876
No 186
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.40 E-value=7.6e-13 Score=101.93 Aligned_cols=70 Identities=20% Similarity=0.314 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++++++|+||++||++|+.+.|.|.++.+++. ++.++.|++|. ..+
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~-----------------------~~~ 63 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-----------QVAISSVDSEA-----------------------RPE 63 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-----------TSCEEEEEGGG-----------------------CHH
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-----------CcEEEEEcCcC-----------------------CHH
Confidence 56899999999999999999999988877653 47788887765 347
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 64 l~~~~~v~~~Pt~~~~-~~G~~v~~ 87 (110)
T 2l6c_A 64 LMKELGFERVPTLVFI-RDGKVAKV 87 (110)
T ss_dssp HHHHTTCCSSCEEEEE-ESSSEEEE
T ss_pred HHHHcCCcccCEEEEE-ECCEEEEE
Confidence 8999999999999999 89999887
No 187
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.39 E-value=3e-13 Score=138.01 Aligned_cols=78 Identities=15% Similarity=0.267 Sum_probs=64.0
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..++. . +.++.|++++|+|||+||++|+.++|.|.++++++++ ++.++.|+.|..
T Consensus 444 ~l~~~-~--~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~----------~v~~~~vd~~~~------------ 498 (780)
T 3apo_A 444 TLGPQ-N--FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG----------QLKVGTLDCTIH------------ 498 (780)
T ss_dssp ECCTT-T--SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC------------
T ss_pred ecCHH-H--HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CeEEEEEeCCCC------------
Confidence 44444 3 3344889999999999999999999999999999864 478888877653
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
..+++.|+|.++|+++++ ++|++
T Consensus 499 -----------~~~~~~~~v~~~Pt~~~~-~~g~~ 521 (780)
T 3apo_A 499 -----------EGLCNMYNIQAYPTTVVF-NQSSI 521 (780)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEE
T ss_pred -----------HHHHHHcCCCcCCeEEEE-cCCce
Confidence 368999999999999999 55776
No 188
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.39 E-value=3e-12 Score=99.59 Aligned_cols=71 Identities=31% Similarity=0.572 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+||++||++|+.+.|.+.++.+++.. ++.++.|++|.+ ..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 75 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT----------DLTVAKLDVDTN-----------------------PE 75 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HH
Confidence 578999999999999999999999999988754 488888888764 37
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 76 ~~~~~~i~~~Pt~~~~-~~g~~~~~ 99 (121)
T 2i1u_A 76 TARNFQVVSIPTLILF-KDGQPVKR 99 (121)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEE
Confidence 8999999999999998 69999876
No 189
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.38 E-value=4.4e-13 Score=107.28 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=59.7
Q ss_pred EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHH
Q 021505 111 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 190 (311)
Q Consensus 111 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 190 (311)
+++|+|||+||++|+.+.|.|.+++++++ +.++.|+++.+... ...+....+++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~------------v~~~~vd~~~~~~~--------------~~~d~~~~l~~ 86 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD------------VPIVMFIWGSLIGE--------------RELSAARLEMN 86 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC------------SCEEEEEECTTCCH--------------HHHHHHHHHHH
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC------------CEEEEEECCCchhh--------------hhhhhhHHHHH
Confidence 89999999999999999999988877542 67888888653211 00122568999
Q ss_pred hCCCCccceEEEECCCCcEEEe
Q 021505 191 YFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 191 ~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.|+|.++||+++++ +|+++.+
T Consensus 87 ~~~v~~~Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 87 KAGVEGTPTLVFYK-EGRIVDK 107 (135)
T ss_dssp HHTCCSSSEEEEEE-TTEEEEE
T ss_pred HcCCceeCeEEEEc-CCEEEEE
Confidence 99999999988886 9999987
No 190
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.38 E-value=1.4e-12 Score=104.68 Aligned_cols=82 Identities=23% Similarity=0.376 Sum_probs=61.0
Q ss_pred CCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCC
Q 021505 96 HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPW 175 (311)
Q Consensus 96 ~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~ 175 (311)
.++. .+...-..++.++|+||++||++|+.+.|.|.++++++.+ ++.++.|++|.+
T Consensus 38 l~~~-~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~------------- 93 (140)
T 1v98_A 38 ADEK-GFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG----------RLKVVKVNVDEH------------- 93 (140)
T ss_dssp ------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-------------
T ss_pred CCHH-HHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC----------ceEEEEEECCCC-------------
Confidence 3344 3443323333399999999999999999999999988764 488888887764
Q ss_pred cccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 176 LALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 176 ~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 94 ----------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 119 (140)
T 1v98_A 94 ----------PGLAARYGVRSVPTLVLF-RRGAPVAT 119 (140)
T ss_dssp ----------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred ----------HHHHHHCCCCccCEEEEE-eCCcEEEE
Confidence 378999999999999999 79999876
No 191
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.37 E-value=8.9e-13 Score=103.50 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=56.8
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
+++|+|+|||+||++|+.+.|.|.+++++|. ++.++-|++|. .
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-----------~v~f~kvd~d~-----------------------~--- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-----------ETKFVKAIVNS-----------------------C--- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-----------TSEEEEEEGGG-----------------------T---
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEEhHH-----------------------h---
Confidence 4599999999999999999999999998875 46777777653 1
Q ss_pred HHhCCCCccceEEEECCCCcEEEe
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.|+|.++||++++ ++|+.+.+
T Consensus 66 ~~~~~v~~~PT~~~f-k~G~~v~~ 88 (118)
T 3evi_A 66 IQHYHDNCLPTIFVY-KNGQIEAK 88 (118)
T ss_dssp STTCCGGGCSEEEEE-ETTEEEEE
T ss_pred HHHCCCCCCCEEEEE-ECCEEEEE
Confidence 378999999999999 89999988
No 192
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.37 E-value=3.4e-12 Score=112.26 Aligned_cols=71 Identities=15% Similarity=0.345 Sum_probs=62.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++.+. ..++.++.|+++.+. ...
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-------~~~v~~~~vd~~~~~---------------------~~~ 80 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAW-------RPALYLAALDCAEET---------------------NSA 80 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGG-------TTTEEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhc-------cCcEEEEEEeCCchh---------------------hHH
Confidence 3589999999999999999999999999999863 346899999986554 568
Q ss_pred HHHhCCCCccceEEEECCC
Q 021505 188 LTKYFDVQGIPCLVIIGPE 206 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~ 206 (311)
+++.|+|.++||++++++.
T Consensus 81 l~~~~~v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 81 VCRDFNIPGFPTVRFFXAF 99 (244)
T ss_dssp HHHHTTCCSSSEEEEECTT
T ss_pred HHHHcCCCccCEEEEEeCC
Confidence 9999999999999999763
No 193
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.36 E-value=2.1e-12 Score=112.22 Aligned_cols=83 Identities=20% Similarity=0.423 Sum_probs=67.2
Q ss_pred eCCCCceeecc-ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcC
Q 021505 95 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 173 (311)
Q Consensus 95 ~~~g~~~v~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~ 173 (311)
..+.+ .+.-. .-++|+++|+|||+||++|+.+.|.|.++++++++ .+.++.|++|...
T Consensus 16 ~lt~~-~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~d~~~---------- 74 (222)
T 3dxb_A 16 HLTDD-SFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG----------KLTVAKLNIDQNP---------- 74 (222)
T ss_dssp ECCTT-THHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTCT----------
T ss_pred eCCHH-HHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC----------CcEEEEEECCCCH----------
Confidence 44444 44332 22579999999999999999999999999998874 3888888887643
Q ss_pred CCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 174 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 174 ~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++||++++ ++|+++.+
T Consensus 75 -------------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 99 (222)
T 3dxb_A 75 -------------GTAPKYGIRGIPTLLLF-KNGEVAAT 99 (222)
T ss_dssp -------------TTGGGGTCCSBSEEEEE-ETTEEEEE
T ss_pred -------------HHHHHcCCCcCCEEEEE-ECCeEEEE
Confidence 67889999999999999 58998876
No 194
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.35 E-value=1.1e-12 Score=133.86 Aligned_cols=138 Identities=12% Similarity=0.099 Sum_probs=90.9
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCc----eeechhhHHHhhhccccCcccHHHHHHHHHHHHHHHHHHHHHHHh
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDD----ATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLL 85 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~----~~~~~~~~~v~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 85 (311)
|++.+..++++|+|+++|+++++.. .+. .+..+| ...+.+. +...+
T Consensus 602 d~~~~~~l~~~~~v~~~Pti~~~~~---~~~~~~~~~~y~g-----------~~~~~~~----------------l~~fi 651 (780)
T 3apo_A 602 DCGQYHSFCTQENVQRYPEIRFYPQ---KSSKAYQYHSYNG-----------WNRDAYS----------------LRSWG 651 (780)
T ss_dssp ETTTTHHHHHHTTCCSSSEEEEECC---CSSSCCSCEECCC-----------SCCSHHH----------------HHHHH
T ss_pred ECcchHHHHHHcCCCCCCeEEEEcC---CCcCccchhhcCC-----------CCCCHHH----------------HHHHH
Confidence 4445678999999999999999874 211 221111 0011111 11112
Q ss_pred cCCCCCeEeeCCCCceee-ccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHH
Q 021505 86 TNHDRGYLLGHPPDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 164 (311)
Q Consensus 86 g~~~pdf~l~~~g~~~v~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~ 164 (311)
....|......++. .+. ...-.+++++|+|||+||++|+.+.|.+.+++++++. ++.++.|++|..
T Consensus 652 ~~~~~~~v~~l~~~-~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~----------~~~~~~vd~~~~-- 718 (780)
T 3apo_A 652 LGFLPQASIDLTPQ-TFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG----------KVRAGKVDCQAY-- 718 (780)
T ss_dssp HTTSCCCSEEECHH-HHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TCEEEEEETTTC--
T ss_pred hhhcccccccCCHH-HHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CceEEEEECCCC--
Confidence 22222222233333 332 1122478999999999999999999999999999864 477888877653
Q ss_pred HHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 165 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 165 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 719 ---------------------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 744 (780)
T 3apo_A 719 ---------------------PQTCQKAGIKAYPSVKLY-QYERAKKS 744 (780)
T ss_dssp ---------------------HHHHHHTTCCSSSEEEEE-EEETTTTE
T ss_pred ---------------------HHHHHhcCCCcCCEEEEE-cCCCcccc
Confidence 478999999999999999 77776544
No 195
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=2.5e-12 Score=103.04 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=55.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
+||+|+|+|||+||++|+.+.|.|.++++++. ++.++.|++|...
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-----------~v~~~~vd~~~~~------------------------ 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-----------ETKFVKAIVNSCI------------------------ 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEECCSSSC------------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CcEEEEEEhhcCc------------------------
Confidence 35899999999999999999999999888763 4667777665421
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+.|+|.++||++++. +|+++.+
T Consensus 74 --~~~~i~~~Pt~~~~~-~G~~v~~ 95 (135)
T 2dbc_A 74 --EHYHDNCLPTIFVYK-NGQIEGK 95 (135)
T ss_dssp --SSCCSSCCSEEEEES-SSSCSEE
T ss_pred --ccCCCCCCCEEEEEE-CCEEEEE
Confidence 589999999999995 8998876
No 196
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.34 E-value=8.7e-13 Score=102.76 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=62.2
Q ss_pred eCCCCceeecc-ccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcC
Q 021505 95 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 173 (311)
Q Consensus 95 ~~~g~~~v~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~ 173 (311)
+.++. .+... ..++++++|+|||+||++|+.+.|.|.++++++... ....++.++.|+.+...
T Consensus 11 ~l~~~-~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~v~~~~vd~~~~~---------- 74 (121)
T 2djj_A 11 VVVAK-NYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS-----EFKDRVVIAKVDATAND---------- 74 (121)
T ss_dssp ECCTT-TTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS-----SCTTSSEEEEEETTTSC----------
T ss_pred Eeccc-CHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc-----ccCCceEEEEEECcccc----------
Confidence 55565 55544 347899999999999999999999999999998741 00125778888776532
Q ss_pred CCcccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 174 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 174 ~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+++ +|.++||+++++++|++
T Consensus 75 --------------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 --------------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------------CSS--CCSSSSEEEEECSSCTT
T ss_pred --------------ccc--ccCcCCeEEEEeCcCCC
Confidence 222 89999999999888773
No 197
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.33 E-value=1.3e-12 Score=102.99 Aligned_cols=71 Identities=23% Similarity=0.510 Sum_probs=57.8
Q ss_pred CCCEEEEEEecCCCh--------------hhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcC
Q 021505 108 VGKTVGLYFSARWCI--------------PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 173 (311)
Q Consensus 108 ~gk~vll~F~a~wC~--------------~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~ 173 (311)
.||+++|+|||+||+ +|+.+.|.+.++++++++ ++.++.|++|.+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~----------~~~~~~vd~d~~~---------- 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG----------KLTVAKLNIDQNP---------- 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----------------CEEEEEETTSCT----------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC----------CeEEEEEECCCCH----------
Confidence 579999999999999 999999999999988864 4788888887643
Q ss_pred CCcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 174 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 174 ~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++++.|+|.++|+++++ ++|+++.+
T Consensus 80 -------------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 104 (123)
T 1oaz_A 80 -------------GTAPKYGIRGIPTLLLF-KNGEVAAT 104 (123)
T ss_dssp -------------TTGGGGTCCBSSEEEEE-ESSSEEEE
T ss_pred -------------HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 67899999999999999 99999876
No 198
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.32 E-value=2.1e-12 Score=119.92 Aligned_cols=72 Identities=21% Similarity=0.383 Sum_probs=55.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+|||+||++|+.+.|.+.+++++++++ .++.++.|+.+...
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~--------~~v~~~~vd~~~~~------------------------ 313 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH--------ENIVIAKMDSTANE------------------------ 313 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTTCB------------------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC--------CcEEEEEEECCccc------------------------
Confidence 5799999999999999999999999999998753 24666655544321
Q ss_pred HHHhCCCCccceEEEECCC-CcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPE-GKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~-G~iv~~ 212 (311)
++.|+|.++||+++++++ |+.+.+
T Consensus 314 -~~~~~v~~~Pt~~~~~~~~~~~~~~ 338 (361)
T 3uem_A 314 -VEAVKVHSFPTLKFFPASADRTVID 338 (361)
T ss_dssp -CSSCCCCSSSEEEEECSSSSCCCEE
T ss_pred -hhhcCCcccCeEEEEECCCCcceeE
Confidence 467999999999999654 444333
No 199
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.30 E-value=1.4e-12 Score=100.90 Aligned_cols=72 Identities=22% Similarity=0.462 Sum_probs=59.1
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++|+++|+||++||++|+.+.|.+.++++++... +.++.++.|+.+.+ ..
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~v~~~~vd~~~~-----------------------~~ 72 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-------GSEIRLAKVDATEE-----------------------SD 72 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT-------CCCCBCEEEETTTC-----------------------CS
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCcEEEEEEcCCCC-----------------------HH
Confidence 5799999999999999999999999999888753 33566666665542 36
Q ss_pred HHHhCCCCccceEEEECCCCcEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
+++.|+|.++|+++++ ++|+++
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 73 LAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp SHHHHTCCSSSEEEEE-ESSCSS
T ss_pred HHHHCCCCcccEEEEE-eCCCcC
Confidence 7889999999999999 677755
No 200
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.28 E-value=9.4e-12 Score=121.26 Aligned_cols=77 Identities=16% Similarity=0.338 Sum_probs=66.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++.+. ..++.|+.|++|.+. ..+
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~-------~~~v~~~~VD~d~d~---------------------~~~ 80 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDW-------RPALNLAVLDCAEET---------------------NSA 80 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGG-------TTTEEEEEEETTSGG---------------------GHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCc-------CCcEEEEEEECCccc---------------------cHH
Confidence 3589999999999999999999999999999863 346899999887654 678
Q ss_pred HHHhCCCCccceEEEECC---CCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGP---EGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~---~G~iv~~ 212 (311)
+++.|+|.++||++++++ +|+.+..
T Consensus 81 l~~~~~V~~~PTl~~f~~g~~~G~~~~~ 108 (519)
T 3t58_A 81 VCREFNIAGFPTVRFFQAFTKNGSGATL 108 (519)
T ss_dssp HHHHTTCCSBSEEEEECTTCCSCCCEEE
T ss_pred HHHHcCCcccCEEEEEcCcccCCCceeE
Confidence 999999999999999986 6665544
No 201
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.28 E-value=4.5e-12 Score=99.69 Aligned_cols=78 Identities=22% Similarity=0.442 Sum_probs=60.6
Q ss_pred cCCCEEEEEEecC-------CChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccc
Q 021505 107 LVGKTVGLYFSAR-------WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 179 (311)
Q Consensus 107 ~~gk~vll~F~a~-------wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p 179 (311)
..|++++|+|||+ ||++|+.+.|.|.++++++.+ ++.++.|+++... .|.
T Consensus 22 ~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~----------~~~~~~vd~~~~~-~~~------------ 78 (123)
T 1wou_A 22 HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE----------GCVFIYCQVGEKP-YWK------------ 78 (123)
T ss_dssp TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT----------TEEEEEEECCCHH-HHH------------
T ss_pred hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC----------CcEEEEEECCCch-hhh------------
Confidence 3589999999999 999999999999998887643 5888888886421 110
Q ss_pred cCchhHHHHHHhCCCCccceEEEECCCCcEE
Q 021505 180 FGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 180 ~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
+....+++.|+|.++||++++++.++++
T Consensus 79 ---d~~~~~~~~~~i~~~Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 79 ---DPNNDFRKNLKVTAVPTLLKYGTPQKLV 106 (123)
T ss_dssp ---CTTCHHHHHHCCCSSSEEEETTSSCEEE
T ss_pred ---chhHHHHHHCCCCeeCEEEEEcCCceEe
Confidence 1145788899999999999998755444
No 202
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.28 E-value=7.8e-13 Score=103.17 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=56.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
+...+||+|||+||++|+.+.+.+...++..... ..+.|+.|+++.+. ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~--------~~~~l~~vdv~~~~---------------------~~~ 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEG--------RAAPVQRLQMRDPL---------------------PPG 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHH--------HHSCEEEEETTSCC---------------------CTT
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhc--------ccceEEEEECCCCC---------------------chh
Confidence 4468999999999999999987665444321110 13668888888753 335
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++..|+|.++||+++++ +|+.+.+
T Consensus 68 la~~~~V~g~PT~i~f~-~G~ev~R 91 (116)
T 3dml_A 68 LELARPVTFTPTFVLMA-GDVESGR 91 (116)
T ss_dssp CBCSSCCCSSSEEEEEE-TTEEEEE
T ss_pred HHHHCCCCCCCEEEEEE-CCEEEee
Confidence 67889999999999997 9999988
No 203
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.27 E-value=4.1e-12 Score=102.93 Aligned_cols=69 Identities=12% Similarity=0.197 Sum_probs=50.6
Q ss_pred CCEEEEEEecCC--ChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeE--EEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 109 GKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE--VVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 109 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~--vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
++.++|+|+++| |++|+.+.|.|.+++++| + ++. |+.|++|.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~----------~v~~~~~~Vd~d~----------------------- 79 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P----------QFDWQVAVADLEQ----------------------- 79 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T----------TSCCEEEEECHHH-----------------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c----------ccceeEEEEECCC-----------------------
Confidence 345788899887 999999999999999988 4 356 77776553
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++++|+|.++||++++ ++|+++.+
T Consensus 80 ~~~la~~~~V~~iPT~~~f-k~G~~v~~ 106 (142)
T 2es7_A 80 SEAIGDRFNVRRFPATLVF-TDGKLRGA 106 (142)
T ss_dssp HHHHHHTTTCCSSSEEEEE-SCC----C
T ss_pred CHHHHHhcCCCcCCeEEEE-eCCEEEEE
Confidence 5689999999999999999 89999877
No 204
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.26 E-value=4.2e-12 Score=92.35 Aligned_cols=64 Identities=16% Similarity=0.337 Sum_probs=55.3
Q ss_pred CEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHH
Q 021505 110 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 189 (311)
Q Consensus 110 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 189 (311)
.+++++||++||++|+.+.|.|.++++++.+ ++.++.|++|.+. +++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~~-----------------------~~~ 49 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD----------AVEVEYINVMENP-----------------------QKA 49 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS----------SEEEEEEESSSSC-----------------------CTT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC----------ceEEEEEECCCCH-----------------------HHH
Confidence 5789999999999999999999999888753 5889999887643 567
Q ss_pred HhCCCCccceEEEECCCCcE
Q 021505 190 KYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 190 ~~~~v~~~Pt~vlid~~G~i 209 (311)
+.|+|.++|++++ +|++
T Consensus 50 ~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 50 MEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp TSTTTCCSSEEEE---TTEE
T ss_pred HHCCCcccCEEEE---CCEE
Confidence 8999999999998 7887
No 205
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.91 E-value=4.8e-13 Score=101.09 Aligned_cols=71 Identities=25% Similarity=0.510 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+||++||++|+.+.|.+.++.+++.+ ++.++.|+.|. ...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~-----------------------~~~ 64 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG----------KVKVVKVNVDE-----------------------NPN 64 (106)
Confidence 468999999999999999999999999988864 36666666654 347
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 88 (106)
T 2yj7_A 65 TAAQYGIRSIPTLLLF-KNGQVVDR 88 (106)
Confidence 8899999999999999 89998866
No 206
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.26 E-value=2.1e-12 Score=93.98 Aligned_cols=63 Identities=14% Similarity=0.218 Sum_probs=54.3
Q ss_pred EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHH
Q 021505 111 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 190 (311)
Q Consensus 111 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 190 (311)
+++++||++||++|+.+.|.+.++.+++.+ ++.++.|++|.+. ++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~~-----------------------~~~~ 49 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD----------KIDVEKIDIMVDR-----------------------EKAI 49 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS----------SCCEEEECTTTCG-----------------------GGGG
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC----------CeEEEEEECCCCH-----------------------HHHH
Confidence 468999999999999999999999988864 4788888887643 6788
Q ss_pred hCCCCccceEEEECCCCcE
Q 021505 191 YFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 191 ~~~v~~~Pt~vlid~~G~i 209 (311)
.|+|.++|++++ +|++
T Consensus 50 ~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 50 EYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp GTCSSCSSEEEE---TTTE
T ss_pred hCCceeeCEEEE---CCEE
Confidence 999999999998 7887
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.24 E-value=8.3e-12 Score=120.33 Aligned_cols=69 Identities=20% Similarity=0.469 Sum_probs=57.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+|+|+|||+||++|+.+.|.+.++++++++. .++.++.|+.+.+ .
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--------~~v~~~~id~~~~------------------------~ 416 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD--------PNIVIAKMDATAN------------------------D 416 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTSS------------------------C
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC--------CCEEEEEEECCch------------------------h
Confidence 4899999999999999999999999999998752 3566766665542 3
Q ss_pred HHHhCCCCccceEEEECCCCc
Q 021505 188 LTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~ 208 (311)
+.+.|+|.++||+++++++|+
T Consensus 417 ~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp CCTTCCCCSSSEEEEECTTCT
T ss_pred hHhhCCCcccCEEEEEeCCCe
Confidence 557899999999999988877
No 208
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.24 E-value=8.9e-13 Score=103.91 Aligned_cols=71 Identities=28% Similarity=0.536 Sum_probs=59.7
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
..+|+++|+||++||++|+.+.|.|.++.+++. ++.++.|++|.. .
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 79 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-----------GAVFLKVDVDEL-----------------------K 79 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-----------TBCCEECCTTTS-----------------------G
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CCEEEEEeccch-----------------------H
Confidence 358899999999999999999999999888764 466777766643 4
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 80 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 104 (130)
T 1wmj_A 80 EVAEKYNVEAMPTFLFI-KDGAEADK 104 (130)
T ss_dssp GGHHHHTCCSSCCCCBC-TTTTCCBC
T ss_pred HHHHHcCCCccceEEEE-eCCeEEEE
Confidence 68899999999998888 89988766
No 209
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.22 E-value=9.8e-12 Score=109.71 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
++++|||+|||+||++|+.+.|.|.+++++|. ++.|+.|+++. ..
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-----------~v~f~kVd~d~------------------------~~ 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-----------MVKFCKIKASN------------------------TG 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-----------TSEEEEEEHHH------------------------HC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEeCCc------------------------HH
Confidence 47999999999999999999999999988874 47788776542 13
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 177 l~~~~~I~~~PTll~~-~~G~~v~~ 200 (245)
T 1a0r_P 177 AGDRFSSDVLPTLLVY-KGGELLSN 200 (245)
T ss_dssp CTTSSCTTTCSEEEEE-ETTEEEEE
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEE
Confidence 5678999999999999 59999877
No 210
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.22 E-value=3.1e-11 Score=93.10 Aligned_cols=73 Identities=12% Similarity=0.152 Sum_probs=62.2
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
+++++|+|+|+||++|+...|.+.++.++ . ++.++.|.+|..++ ...++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~----------~v~~~~vdVde~r~-------------------~Sn~I 72 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R----------DMDGYYLIVQQERD-------------------LSDYI 72 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H----------TCCEEEEEGGGGHH-------------------HHHHH
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C----------CceEEEEEeecCch-------------------hhHHH
Confidence 68999999999999999999999998874 2 47889998886541 13579
Q ss_pred HHhCCCCc-cceEEEECCCCcEEEec
Q 021505 189 TKYFDVQG-IPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 189 ~~~~~v~~-~Pt~vlid~~G~iv~~~ 213 (311)
+..|||.+ +|+++++ ++|+++.+.
T Consensus 73 A~~~~V~h~sPq~il~-k~G~~v~~~ 97 (112)
T 3iv4_A 73 AKKTNVKHESPQAFYF-VNGEMVWNR 97 (112)
T ss_dssp HHHHTCCCCSSEEEEE-ETTEEEEEE
T ss_pred HHHhCCccCCCeEEEE-ECCEEEEEe
Confidence 99999995 9999999 999999874
No 211
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.21 E-value=4.1e-13 Score=103.38 Aligned_cols=73 Identities=16% Similarity=0.325 Sum_probs=53.8
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCccccc
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 180 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~ 180 (311)
.+++++..||+++|+|||+||++|+.+.|.|.++++++ ..|-+..|...
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~--------------~~v~~~~~~~~----------------- 52 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------PYVECSPNGPG----------------- 52 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGS--------------CEEESCTTCTT-----------------
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhC--------------CEEEEeccccc-----------------
Confidence 56677788899999999999999999999998876432 23333332210
Q ss_pred CchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 181 GDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 181 ~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+...++++.|+|.++||++| +|+.
T Consensus 53 --~~~~~l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 53 --TPQAQECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp --SCCCHHHHHTTCCSSSEEEE---TTEE
T ss_pred --chhHHHHHHcCCeEeCEEEE---CCEE
Confidence 01458999999999999776 6764
No 212
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=3.1e-11 Score=109.64 Aligned_cols=69 Identities=28% Similarity=0.482 Sum_probs=60.7
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++.+ .+.|+.|++|.+. ...
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~----------~~~~~~v~~d~~~---------------------~~~ 82 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG----------VVQVAAVNCDLNK---------------------NKA 82 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC----------CcEEEEEEccCcc---------------------CHH
Confidence 468999999999999999999999999998864 4889999998654 568
Q ss_pred HHHhCCCCccceEEEECCCCc
Q 021505 188 LTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~ 208 (311)
+++.|+|.++||++++++ |+
T Consensus 83 l~~~~~I~~~Pt~~~~~~-g~ 102 (298)
T 3ed3_A 83 LCAKYDVNGFPTLMVFRP-PK 102 (298)
T ss_dssp HHHHTTCCBSSEEEEEEC-CC
T ss_pred HHHhCCCCccceEEEEEC-Cc
Confidence 999999999999999965 44
No 213
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.18 E-value=8.2e-12 Score=108.06 Aligned_cols=69 Identities=20% Similarity=0.382 Sum_probs=56.0
Q ss_pred cCCCEEEEEEecC-CChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 107 LVGKTVGLYFSAR-WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 107 ~~gk~vll~F~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
.++++++++||++ ||++|+.+.|.+.++.+. . +++.++.|++|... .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~----------~~v~~~~vd~~~~~---------------------~ 67 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T----------DKLSYEIVDFDTPE---------------------G 67 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C----------TTEEEEEEETTSHH---------------------H
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C----------CceEEEEEeCCCcc---------------------c
Confidence 4557889999999 999999999999987753 2 36888888887533 4
Q ss_pred HHHHHhCCCCccceEEEECCCCc
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~ 208 (311)
.++++.|+|.++||++++ ++|+
T Consensus 68 ~~~~~~~~v~~~Pt~~~~-~~g~ 89 (226)
T 1a8l_A 68 KELAKRYRIDRAPATTIT-QDGK 89 (226)
T ss_dssp HHHHHHTTCCSSSEEEEE-ETTB
T ss_pred HHHHHHcCCCcCceEEEE-cCCc
Confidence 589999999999999999 4554
No 214
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.17 E-value=3.1e-11 Score=104.79 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=53.5
Q ss_pred CCEEEEEE----ecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 109 GKTVGLYF----SARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 109 gk~vll~F----~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
+.+++++| |++||++|+.+.|.+.++++++.+. +.+.++.|+.|.
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~--------~~v~~~~vd~~~----------------------- 69 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ--------DKIKLDIYSPFT----------------------- 69 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT--------TTEEEEEECTTT-----------------------
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC--------CceEEEEecCcc-----------------------
Confidence 34555666 5899999999999999999888531 257777776655
Q ss_pred HHHHHHhCCCCccceEEEECCCCcE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+.++++.|+|+++||+++++ +|+.
T Consensus 70 ~~~l~~~~~v~~~Ptl~~~~-~~~~ 93 (229)
T 2ywm_A 70 HKEETEKYGVDRVPTIVIEG-DKDY 93 (229)
T ss_dssp CHHHHHHTTCCBSSEEEEES-SSCC
T ss_pred cHHHHHHcCCCcCcEEEEEC-CCcc
Confidence 45899999999999999995 4443
No 215
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.17 E-value=2.2e-10 Score=95.93 Aligned_cols=90 Identities=20% Similarity=0.310 Sum_probs=64.9
Q ss_pred CCCeEeeCCCCceeec--cccCCCEEEEEEec-------CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 89 DRGYLLGHPPDEKVPV--SSLVGKTVGLYFSA-------RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 89 ~pdf~l~~~g~~~v~l--~~~~gk~vll~F~a-------~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.++-.+..+.. .+.- ..-++.+|||+||| .||++|+.+.|.+.+++++|.... .+.++.|+-|++
T Consensus 16 ~~~~vi~lt~~-nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~-----~~~~v~f~kvD~ 89 (178)
T 3ga4_A 16 DDTGVITVTAD-NYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA-----PQSLNLFFTVDV 89 (178)
T ss_dssp CTTSEEECCTT-THHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC-----TTCCEEEEEEET
T ss_pred ccCCCEECCHH-HHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc-----CCCCEEEEEEEC
Confidence 34445555554 4431 12235689999999 499999999999999999997320 012467777776
Q ss_pred CCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCC
Q 021505 160 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEG 207 (311)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G 207 (311)
|. ..+++++|+|+++||++++-+.+
T Consensus 90 d~-----------------------~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 90 NE-----------------------VPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp TT-----------------------CHHHHHHTTCCSSCEEEEECCCC
T ss_pred cc-----------------------CHHHHHHcCCCCCCEEEEEcCCC
Confidence 65 45899999999999999995443
No 216
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.16 E-value=1.9e-11 Score=106.10 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
+|++|+|+||++||++|+.+.|.|.+++++|. ++.|+.|+++ + ..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-----------~v~f~~vd~~-~-----------------------~~ 163 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-----------MVKFCKIRAS-N-----------------------TG 163 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-----------TSEEEEEEHH-H-----------------------HT
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-----------CeEEEEEECC-c-----------------------HH
Confidence 45899999999999999999999999888764 5778888765 1 24
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 164 l~~~~~i~~~PTl~~~-~~G~~v~~ 187 (217)
T 2trc_P 164 AGDRFSSDVLPTLLVY-KGGELISN 187 (217)
T ss_dssp CSTTSCGGGCSEEEEE-ETTEEEEE
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEE
Confidence 6678999999999999 69999876
No 217
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.13 E-value=1.8e-10 Score=106.80 Aligned_cols=68 Identities=16% Similarity=0.275 Sum_probs=55.0
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.+.++|+|+++||++|+.+.+.+.+++++++++ +.++.|+.|... ...+
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~----------i~f~~vd~~~~~---------------------~~~~ 183 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK----------ILFIFIDSDHTD---------------------NQRI 183 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT----------CEEEEECTTSGG---------------------GHHH
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc----------eEEEEecCChHH---------------------HHHH
Confidence 357899999999999999999999999999754 566666554323 5689
Q ss_pred HHhCCCCc--cceEEEECCCC
Q 021505 189 TKYFDVQG--IPCLVIIGPEG 207 (311)
Q Consensus 189 ~~~~~v~~--~Pt~vlid~~G 207 (311)
++.|||.+ +|++++++.++
T Consensus 184 ~~~fgi~~~~~P~~~~~~~~~ 204 (361)
T 3uem_A 184 LEFFGLKKEECPAVRLITLEE 204 (361)
T ss_dssp HHHTTCCTTTCSEEEEEECC-
T ss_pred HHHcCCCccCCccEEEEEcCC
Confidence 99999988 99999997644
No 218
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.13 E-value=1.1e-10 Score=83.37 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=51.3
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
+.|+||++||++|+.+.|.+.++.+++.. ++.++.|+ + .++++.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~----------~~~~~~v~---~-----------------------~~~~~~ 45 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI----------DAEFEKIK---E-----------------------MDQILE 45 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC----------CEEEEEEC---S-----------------------HHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC----------ceEEEEec---C-----------------------HHHHHH
Confidence 46899999999999999999999888753 46666664 2 267889
Q ss_pred CCCCccceEEEECCCCcEEEe
Q 021505 192 FDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv~~ 212 (311)
|+|.++|++++ +|+++.+
T Consensus 46 ~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 46 AGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp HTCSSSSCEEE---TTEEEEC
T ss_pred CCCCcCCEEEE---CCEEEEc
Confidence 99999999998 8998876
No 219
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=107.72 Aligned_cols=89 Identities=13% Similarity=0.248 Sum_probs=66.2
Q ss_pred eCCCCceeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCC
Q 021505 95 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 174 (311)
Q Consensus 95 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~ 174 (311)
..+++ .+...-..+++++|+|||+||++|+++.|.+.+++++++... ....++.++.|+++.
T Consensus 9 ~l~~~-~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~----~~~~~v~~~~Vd~~~------------- 70 (382)
T 2r2j_A 9 SLDTE-NIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF----PNENQVVFARVDCDQ------------- 70 (382)
T ss_dssp BCCTT-THHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC-------CCEEEEEEETTT-------------
T ss_pred ECCHH-HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc----CCCCceEEEEEECCc-------------
Confidence 44444 443222357899999999999999999999999999985320 001247777777665
Q ss_pred CcccccCchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 175 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 175 ~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+++.|+|.++||++++ ++|+++.+
T Consensus 71 ----------~~~l~~~~~v~~~Pt~~~f-~~G~~~~~ 97 (382)
T 2r2j_A 71 ----------HSDIAQRYRISKYPTLKLF-RNGMMMKR 97 (382)
T ss_dssp ----------CHHHHHHTTCCEESEEEEE-ETTEEEEE
T ss_pred ----------cHHHHHhcCCCcCCEEEEE-eCCcEeee
Confidence 3489999999999999998 68888753
No 220
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.08 E-value=2.8e-10 Score=110.30 Aligned_cols=69 Identities=20% Similarity=0.468 Sum_probs=53.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+++|+|||+||++|+.+.|.+.++++++... ..++.++.|+.+...
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-------~~~v~~~~vd~~~~~------------------------ 423 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANA-------TSDVLIAKLDHTEND------------------------ 423 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHH-------CSSCEEEEEEGGGCC------------------------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhcc-------CCcEEEEEecCCccc------------------------
Confidence 5799999999999999999999999999998732 235666666544321
Q ss_pred HHHhCCCCccceEEEECCCCcE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+.+ |+|.++||++++ ++|+.
T Consensus 424 ~~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 424 VRG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp CSS-CCCSSSSEEEEE-CCTTS
T ss_pred ccc-CCceecCeEEEE-eCCce
Confidence 123 999999999999 77764
No 221
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.07 E-value=1.2e-10 Score=111.45 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=59.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+|+|||+|||+||++|+.+.|.+.++++++..+. .++....+.|+.|++|.. .+
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~--g~~~~~~v~f~~VD~d~~-----------------------~~ 95 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEH--GKDALQIATAAAVNCASE-----------------------VD 95 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSS--CSSGGGGCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhc--ccccCceEEEEEEECCCC-----------------------HH
Confidence 45899999999999999999999999999886320 000001488888887764 48
Q ss_pred HHHhCCCCccceEEEECCCCc
Q 021505 188 LTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~ 208 (311)
+++.|+|.++||+++++++|.
T Consensus 96 la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 96 LCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp HHHHTTCCSSCEEEEEEESSC
T ss_pred HHHHcCCCccCeEEEEECCCc
Confidence 999999999999999976553
No 222
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.04 E-value=1e-09 Score=89.89 Aligned_cols=74 Identities=14% Similarity=0.295 Sum_probs=56.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchh
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 184 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~ 184 (311)
.||+|+|+|+++||.+|+.+.... .++.+.+++ ++.++-++.|...
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----------~fv~v~~d~~~~~--------------------- 89 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----------HFIFWQVYHDSEE--------------------- 89 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----------TEEEEEEESSSHH---------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----------CeEEEEEecCCHh---------------------
Confidence 479999999999999999997654 344444443 3556666554322
Q ss_pred HHHHHHhCCCCccceEEEECCC-CcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPE-GKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~-G~iv~~ 212 (311)
...+.+.|++.++|+++|+|++ |+.+..
T Consensus 90 ~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 90 GQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 5678899999999999999998 876654
No 223
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.04 E-value=7.9e-10 Score=106.43 Aligned_cols=71 Identities=18% Similarity=0.336 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++.+ .+.++.|+++.. ..
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~----------~v~~~~vd~~~~-----------------------~~ 66 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG----------IVPLAKVDCTAN-----------------------TN 66 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCCEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC----------ceEEEEEECCCC-----------------------HH
Confidence 348999999999999999999999999998874 266777777653 48
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++||++++ ++|+++.+
T Consensus 67 l~~~~~v~~~Ptl~~~-~~g~~~~~ 90 (481)
T 3f8u_A 67 TCNKYGVSGYPTLKIF-RDGEEAGA 90 (481)
T ss_dssp HHHHTTCCEESEEEEE-ETTEEEEE
T ss_pred HHHhcCCCCCCEEEEE-eCCceeee
Confidence 9999999999999999 78876655
No 224
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.02 E-value=5.4e-10 Score=103.40 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=58.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHH-------HHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCccccc
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPK-------LLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 180 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~-------l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~ 180 (311)
++++++|+|||+||+ |+.++|. +.++++.+++. ++.++.|+++..
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~---------~v~~~~Vd~~~~------------------ 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK---------DIGFVMVDAKKE------------------ 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS---------SEEEEEEETTTT------------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc---------CcEEEEEeCCCC------------------
Confidence 468999999999999 9999998 77777777642 588888877653
Q ss_pred CchhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 181 GDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 181 ~~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
..+++.|+|.++||++++ ++|++...
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~-~~g~~~~~ 104 (350)
T 1sji_A 79 -----AKLAKKLGFDEEGSLYVL-KGDRTIEF 104 (350)
T ss_dssp -----HHHHHHHTCCSTTEEEEE-ETTEEEEE
T ss_pred -----HHHHHhcCCCccceEEEE-ECCcEEEe
Confidence 479999999999999999 77885533
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.01 E-value=1.7e-09 Score=104.77 Aligned_cols=68 Identities=18% Similarity=0.419 Sum_probs=59.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++++|+|||+||++|+.+.|.+.++++++++. ++.++.|+++.. ..
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---------~v~~~~vd~~~~-----------------------~~ 77 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK---------NITLAQIDCTEN-----------------------QD 77 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---------TCEEEEEETTTC-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC---------CeEEEEEECCCC-----------------------HH
Confidence 5789999999999999999999999999988742 588888877664 47
Q ss_pred HHHhCCCCccceEEEECCCCc
Q 021505 188 LTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~ 208 (311)
+++.|+|.++||++++. +|+
T Consensus 78 l~~~~~v~~~Pt~~~~~-~g~ 97 (504)
T 2b5e_A 78 LCMEHNIPGFPSLKIFK-NSD 97 (504)
T ss_dssp HHHHTTCCSSSEEEEEE-TTC
T ss_pred HHHhcCCCcCCEEEEEe-CCc
Confidence 99999999999999994 565
No 226
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.90 E-value=8.7e-09 Score=96.06 Aligned_cols=72 Identities=8% Similarity=0.020 Sum_probs=55.6
Q ss_pred CCCEEEEEEecCCChhhHhhh------HHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccC
Q 021505 108 VGKTVGLYFSARWCIPCEKFM------PKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFG 181 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~------p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~ 181 (311)
.+++++|+|||+||++|.... |.+.++.+.+... ++.++.|+++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~---------~v~~~~Vd~~~-------------------- 79 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK---------GVGFGLVDSEK-------------------- 79 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT---------TEEEEEEETTT--------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC---------CceEEEEeCcc--------------------
Confidence 468999999999999973322 5677777777642 57777777765
Q ss_pred chhHHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 182 DPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 182 ~d~~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...++++|+|+++||++++ ++|+++..
T Consensus 80 ---~~~l~~~~~V~~~PTl~~f-~~G~~~~y 106 (367)
T 3us3_A 80 ---DAAVAKKLGLTEEDSIYVF-KEDEVIEY 106 (367)
T ss_dssp ---THHHHHHHTCCSTTEEEEE-ETTEEEEC
T ss_pred ---cHHHHHHcCCCcCceEEEE-ECCcEEEe
Confidence 4489999999999999999 57877643
No 227
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.85 E-value=7.4e-09 Score=79.42 Aligned_cols=64 Identities=22% Similarity=0.441 Sum_probs=53.1
Q ss_pred EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHH
Q 021505 111 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 190 (311)
Q Consensus 111 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 190 (311)
.+++.||++||++|+...+.|.++.+++ ++.+..|++|.+. ++.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~------------~i~~~~vDId~d~-----------------------~l~~ 74 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS------------WFELEVINIDGNE-----------------------HLTR 74 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS------------CCCCEEEETTTCH-----------------------HHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc------------CCeEEEEECCCCH-----------------------HHHH
Confidence 5688999999999999999999887764 3667888888654 6788
Q ss_pred hCCCCccceEEEECCCCcEEE
Q 021505 191 YFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 191 ~~~v~~~Pt~vlid~~G~iv~ 211 (311)
.|+++ +|+++++ .+|+++.
T Consensus 75 ~ygv~-VP~l~~~-~dG~~v~ 93 (107)
T 2fgx_A 75 LYNDR-VPVLFAV-NEDKELC 93 (107)
T ss_dssp HSTTS-CSEEEET-TTTEEEE
T ss_pred HhCCC-CceEEEE-ECCEEEE
Confidence 99997 9999887 6788774
No 228
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.83 E-value=4.6e-09 Score=92.39 Aligned_cols=65 Identities=12% Similarity=0.207 Sum_probs=51.1
Q ss_pred CEEEEEEecCC--ChhhHhhhHHHHHHHHHHHhhhhhcCCCCCC--eEEEEEecCCCHHHHHHHHhcCCCcccccCchhH
Q 021505 110 KTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALED--FEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 185 (311)
Q Consensus 110 k~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~--~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~ 185 (311)
++|+|.||++| |++|+.+.+.+.++.+.+... ... +.|+.++.|. .
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~-------~~~~~v~~~~vd~d~-----------------------~ 75 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTR-------NGGKLLKLNVYYRES-----------------------D 75 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEE-------TTEESEEEEEEETTT-----------------------T
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCC-------CCCceeEEEEecCCc-----------------------C
Confidence 57899999999 999999999999988764210 011 6677776654 4
Q ss_pred HHHHHhCCCCccceEEEEC
Q 021505 186 KELTKYFDVQGIPCLVIIG 204 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid 204 (311)
..+++.|||.++||+.+++
T Consensus 76 ~~~~~~~gv~~~Pt~~i~~ 94 (243)
T 2hls_A 76 SDKFSEFKVERVPTVAFLG 94 (243)
T ss_dssp HHHHHHTTCCSSSEEEETT
T ss_pred HHHHHhcCCCcCCEEEEEC
Confidence 5799999999999999983
No 229
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.83 E-value=1.7e-08 Score=83.60 Aligned_cols=48 Identities=13% Similarity=0.185 Sum_probs=39.0
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
...+.+..++++|+.||.+|||+|+.+.|.|.++.+++. ++.|+++.+
T Consensus 14 ~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-----------~v~~~~~~~ 61 (175)
T 3gyk_A 14 APVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP-----------NVRLVYREW 61 (175)
T ss_dssp SCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEEEC
T ss_pred CCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC-----------CEEEEEEeC
Confidence 456666778999999999999999999999998888754 366666654
No 230
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.81 E-value=6.1e-09 Score=75.22 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=48.9
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.||++||++|+.+.+.|.++.+++ ++.+..+.+|.+. ...++.+.|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~------------~~~~~~~~v~~~~--------------------~~~~~~~~~ 51 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS------------KYTVEIVHLGTDK--------------------ARIAEAEKA 51 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT------------TEEEEEEETTTCS--------------------STHHHHHHH
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc------------CCeEEEEEecCCh--------------------hhHHHHHHc
Confidence 56789999999999999988776543 3556666666531 034677899
Q ss_pred CCCccceEEEECCCCcEEEe
Q 021505 193 DVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv~~ 212 (311)
|+.++|++++ +|+++..
T Consensus 52 gv~~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 52 GVKSVPALVI---DGAAFHI 68 (80)
T ss_dssp TCCEEEEEEE---TTEEEEE
T ss_pred CCCcCCEEEE---CCEEEEe
Confidence 9999999877 7887654
No 231
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.78 E-value=7.9e-08 Score=82.87 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=60.9
Q ss_pred eeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CH---------------
Q 021505 102 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQ--------------- 163 (311)
Q Consensus 102 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~--------------- 163 (311)
+.+....+|++++.||++|||+|+++.|.|.++.+. ++.|+++.+.. ..
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-------------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~ 145 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL-------------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDK 145 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT-------------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSH
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC-------------CcEEEEEECCccCCCchHHHHHHHHHhccCH
Confidence 444555688999999999999999999998876541 47777776531 11
Q ss_pred -HHHHHHHhcCCCc--ccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 164 -TSFESYFGTMPWL--ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 164 -~~~~~~~~~~~~~--~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
..|.+++...... ......+.+.++.+.|||.++|++++. +|+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~ 192 (216)
T 1eej_A 146 NKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTL 192 (216)
T ss_dssp HHHHHHHHTTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCE
T ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeE
Confidence 2233333332210 122233456789999999999998654 4543
No 232
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.74 E-value=7.7e-08 Score=81.19 Aligned_cols=44 Identities=25% Similarity=0.224 Sum_probs=37.7
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
..++++|+.||++|||+|+.+.|.+.++.+++.+ ++.++.+.++
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ----------DVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC----------CeEEEEEecc
Confidence 3579999999999999999999999988887753 4788888876
No 233
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.72 E-value=2.2e-08 Score=79.60 Aligned_cols=67 Identities=10% Similarity=0.175 Sum_probs=55.8
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
+++|+++|||+ |++|+.+.|.|.+++++|+++ +.|+.|++|. ...+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk----------~~f~~vd~d~-----------------------~~~~ 68 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV----------INFGTIDAKA-----------------------FGAH 68 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT----------SEEEEECTTT-----------------------TGGG
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe----------EEEEEEchHH-----------------------hHHH
Confidence 46899999999 899999999999999988753 6777777665 3468
Q ss_pred HHhCCCCc--cceEEEECC-CCcE
Q 021505 189 TKYFDVQG--IPCLVIIGP-EGKT 209 (311)
Q Consensus 189 ~~~~~v~~--~Pt~vlid~-~G~i 209 (311)
++.|||++ +|++++++. +|+.
T Consensus 69 a~~~gi~~~~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 69 AGNLNLKTDKFPAFAIQEVAKNQK 92 (133)
T ss_dssp TTTTTCCSSSSSEEEEECTTTCCB
T ss_pred HHHcCCCcccCCEEEEEecCcCcc
Confidence 89999999 999999964 5665
No 234
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.72 E-value=2.2e-08 Score=73.87 Aligned_cols=58 Identities=19% Similarity=0.309 Sum_probs=44.8
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.||++||++|+...|.|.++..+ . +.-|++|.++ +++++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~--------------~-~~~vdid~~~-----------------------~l~~~~ 44 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG--------------A-FFSVFIDDDA-----------------------ALESAY 44 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC--------------C-EEEEECTTCH-----------------------HHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh--------------h-eEEEECCCCH-----------------------HHHHHh
Confidence 6789999999999999988654321 1 4567777644 688899
Q ss_pred CCCccceEEEECCCCcEEE
Q 021505 193 DVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv~ 211 (311)
+++ +|++++ .+|+.+.
T Consensus 45 g~~-vPtl~~--~~G~~v~ 60 (87)
T 1ttz_A 45 GLR-VPVLRD--PMGRELD 60 (87)
T ss_dssp TTT-CSEEEC--TTCCEEE
T ss_pred CCC-cCeEEE--ECCEEEe
Confidence 998 999887 6788874
No 235
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.71 E-value=6.7e-09 Score=80.07 Aligned_cols=68 Identities=21% Similarity=0.347 Sum_probs=45.9
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
++.|++ ||++||++|+.+.|.|.++.. .+.++-|+.+..... ....+
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~--------------~~~~v~v~~~~~~~~------------------~~~~l 65 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA--------------SYKVVELDELSDGSQ------------------LQSAL 65 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC--------------CCEEEEGGGSTTHHH------------------HHHHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC--------------CeEEEEccCCCChHH------------------HHHHH
Confidence 345666 999999999999998776532 244444443332111 02468
Q ss_pred HHhCCCCccceEEEECCCCcEEEe
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
.+.|++.++|++ ++ +|+++..
T Consensus 66 ~~~~~v~~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 66 AHWTGRGTVPNV-FI--GGKQIGG 86 (116)
T ss_dssp HHHHSCCSSCEE-EE--TTEEEEC
T ss_pred HHHhCCCCcCEE-EE--CCEEECC
Confidence 899999999999 45 6888765
No 236
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.70 E-value=5.2e-08 Score=82.04 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=35.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.++++|+.||..|||+|..+.|.|.++.+++.+ ++.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA----------DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC----------CeEEEEEehh
Confidence 579999999999999999999999888887654 4677766653
No 237
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.66 E-value=2.6e-07 Score=81.38 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=55.4
Q ss_pred CCCEEEEEEe--cCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--CHHHHHHHHhcCCCcccccCch
Q 021505 108 VGKTVGLYFS--ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR--DQTSFESYFGTMPWLALPFGDP 183 (311)
Q Consensus 108 ~gk~vll~F~--a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~--~~~~~~~~~~~~~~~~~p~~~d 183 (311)
.+++|||.|| |+||+ +.|.+.++++++... .+++.|+-|++|. +.
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~-------~~~v~~akVD~d~~g~~-------------------- 80 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKA-------TKDLLIATVGVKDYGEL-------------------- 80 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHH-------CSSEEEEEEEECSSTTC--------------------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhcc-------CCCeEEEEEECCccccc--------------------
Confidence 4689999999 99998 999999999999752 2368888888776 11
Q ss_pred hHHHHHHhCCCC--ccceEEEECCCCc
Q 021505 184 TIKELTKYFDVQ--GIPCLVIIGPEGK 208 (311)
Q Consensus 184 ~~~~l~~~~~v~--~~Pt~vlid~~G~ 208 (311)
.+..+++.|+|. ++||++++- |+
T Consensus 81 ~n~~la~~~~V~~~~~PTl~~F~--G~ 105 (248)
T 2c0g_A 81 ENKALGDRYKVDDKNFPSIFLFK--GN 105 (248)
T ss_dssp TTHHHHHHTTCCTTSCCEEEEES--SS
T ss_pred ccHHHHHHhCCCcCCCCeEEEEe--CC
Confidence 035899999999 999999994 76
No 238
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.62 E-value=1.1e-07 Score=80.12 Aligned_cols=43 Identities=26% Similarity=0.381 Sum_probs=36.3
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.++++|+.||..|||+|..+.|.|.++.+++.. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS----------DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC----------ceEEEEeccc
Confidence 578999999999999999999999998887753 4777777763
No 239
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.57 E-value=1.5e-07 Score=71.11 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=47.6
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.+++++.|+++||++|+...+.|.++.+ ++.+..|++|.+. ..++
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~--------------~i~~~~vdi~~~~---------------------~~el 59 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD--------------RFILQEVDITLPE---------------------NSTW 59 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS--------------SSEEEEEETTSST---------------------THHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh--------------CCeEEEEECCCcc---------------------hHHH
Confidence 4568888999999999999998765432 4678888887323 4578
Q ss_pred HHhCCCCccceEEEECCCCcEE
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv 210 (311)
.+.|+ .++|+++ + +|+.+
T Consensus 60 ~~~~g-~~vP~l~-~--~g~~~ 77 (100)
T 1wjk_A 60 YERYK-FDIPVFH-L--NGQFL 77 (100)
T ss_dssp HHHSS-SSCSEEE-E--SSSEE
T ss_pred HHHHC-CCCCEEE-E--CCEEE
Confidence 89999 9999764 4 46654
No 240
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.52 E-value=1.7e-07 Score=67.81 Aligned_cols=66 Identities=15% Similarity=0.301 Sum_probs=49.8
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|+...+.|.++.+++. ++.+..|+++.+.. ...++.+.|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-----------~i~~~~vdi~~~~~-------------------~~~~l~~~~ 52 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-----------DFQYQYVDIRAEGI-------------------TKEDLQQKA 52 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-----------SCEEEEECHHHHTC-------------------CSHHHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-----------CceEEEEecccChH-------------------HHHHHHHHh
Confidence 677999999999999999999887653 57788887654210 024788889
Q ss_pred C--CCccceEEEECCCCcEEE
Q 021505 193 D--VQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 193 ~--v~~~Pt~vlid~~G~iv~ 211 (311)
+ +.++|+++ + +|+.+.
T Consensus 53 ~~~~~~vP~i~-~--~g~~i~ 70 (85)
T 1ego_A 53 GKPVETVPQIF-V--DQQHIG 70 (85)
T ss_dssp CCCSCCSCEEE-E--TTEEEE
T ss_pred CCCCceeCeEE-E--CCEEEE
Confidence 9 99999984 4 577664
No 241
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.51 E-value=2.7e-07 Score=80.98 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=55.1
Q ss_pred CCCEEEEEEec--CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CHHHHHHHHhcCCCcccccCc
Q 021505 108 VGKTVGLYFSA--RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQTSFESYFGTMPWLALPFGD 182 (311)
Q Consensus 108 ~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~~~~~~~~~~~~~~~~p~~~ 182 (311)
.+++|||.||| +||+ +.|.+.++.+.+.. .+++.|+.|++|. +.
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~--------~~~v~~akVDvd~~g~~~------------------- 69 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS--------SDDLLVAEVGISDYGDKL------------------- 69 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT--------CTTEEEEEECCCCSSSCC-------------------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC--------CCCeEEEEEeCCcccchh-------------------
Confidence 45899999999 9998 99999999998864 2368888887663 22
Q ss_pred hhHHHHHHhCCCC--ccceEEEECCCCc
Q 021505 183 PTIKELTKYFDVQ--GIPCLVIIGPEGK 208 (311)
Q Consensus 183 d~~~~l~~~~~v~--~~Pt~vlid~~G~ 208 (311)
...+++.|+|. ++||++++ ++|+
T Consensus 70 --~~~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 70 --NMELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp --SHHHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred --hHHHHHHcCCCCCCCCEEEEE-eCCC
Confidence 46899999999 99999999 6666
No 242
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.42 E-value=4.7e-07 Score=88.17 Aligned_cols=68 Identities=13% Similarity=0.173 Sum_probs=56.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
.+++.++.||++||++|+.+.|.+.++..++. ++.+..|+.|. ..+
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-----------~v~~~~vd~~~-----------------------~~~ 161 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-----------RIKHTAIDGGT-----------------------FQN 161 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-----------TEEEEEEETTT-----------------------CHH
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-----------ceEEEEEechh-----------------------hHH
Confidence 46788999999999999999999998877653 47777777765 458
Q ss_pred HHHhCCCCccceEEEECCCCcEEEe
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+++.|+|.++|++++ +|+.+..
T Consensus 162 ~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 162 EITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp HHHHTTCCSSSEEEE---TTEEEEE
T ss_pred HHHHhCCCccCEEEE---CCEEEec
Confidence 999999999999977 7888765
No 243
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.40 E-value=1.9e-06 Score=75.50 Aligned_cols=96 Identities=8% Similarity=0.063 Sum_probs=61.1
Q ss_pred eeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC---CC-------------HHH
Q 021505 102 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---RD-------------QTS 165 (311)
Q Consensus 102 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d---~~-------------~~~ 165 (311)
+.+..-.+|++++.|+.+|||+|+++.+.+.++.+. .++.|+.+.+. .+ ...
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~------------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~ 157 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS------------GKVQLRTLLVGVIKPESPATAAAILASKDPAK 157 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT------------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC------------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHH
Confidence 444445678999999999999999999998876553 15777766652 11 111
Q ss_pred HHHHHh-cCC--Ccc--------cccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 166 FESYFG-TMP--WLA--------LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 166 ~~~~~~-~~~--~~~--------~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+.++.. .+. .+. .....+.+.++.+.+||.++|++++.|.+|++
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 158 TWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHHHHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 111111 110 000 00012234578899999999999999888975
No 244
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.39 E-value=1.7e-06 Score=72.55 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=35.4
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.++++|+.||..+||+|..+.+.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK----------DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT----------TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC----------ceEEEEeCc
Confidence 578899999999999999999999888877653 477777765
No 245
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.39 E-value=3.5e-07 Score=77.83 Aligned_cols=45 Identities=18% Similarity=0.292 Sum_probs=37.3
Q ss_pred cCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 107 LVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 107 ~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
..++++||.||+.|||+|+.+.|.| .++.+++.+ ++.|..+.++.
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~----------~v~~~~~~v~~ 158 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE----------GVKMTKYHVNF 158 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT----------TCCEEEEECSS
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC----------CCEEEEeccCc
Confidence 3468999999999999999999988 887777753 57788888765
No 246
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.38 E-value=1.1e-07 Score=85.51 Aligned_cols=73 Identities=15% Similarity=0.358 Sum_probs=50.1
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCccccc
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 180 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~ 180 (311)
.+.+++.-++..+++|||+||++|+++.|.+.++.+++ . .|.+|.+.. +
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l--------------~--~Vd~d~~d~--------------~- 237 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------P--YVECSPNGP--------------G- 237 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS--------------C--EEESCSSCS--------------S-
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc--------------C--EEEEeecCc--------------h-
Confidence 55565555555679999999999999999998876432 1 344442110 0
Q ss_pred CchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 181 GDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 181 ~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+...+++++|+|+++||+++ +|+.
T Consensus 238 --~~~~~la~~~gI~~vPT~~i---~G~~ 261 (291)
T 3kp9_A 238 --TPQAQECTEAGITSYPTWII---NGRT 261 (291)
T ss_dssp --SCCCHHHHTTTCCSTTEEEE---TTEE
T ss_pred --hhHHHHHHHcCCcccCeEEE---CCEE
Confidence 11458999999999999655 6763
No 247
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.35 E-value=9.9e-07 Score=75.69 Aligned_cols=86 Identities=20% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---C----------------HHHHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---D----------------QTSFES 168 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~----------------~~~~~~ 168 (311)
.+|++++.||.+|||+|+++.|.|.++.+ . ++.|..+.+.. . ...|.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~---------~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~ 151 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----L---------GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNE 151 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----T---------TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----C---------CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHH
Confidence 56899999999999999999999887433 1 46676665431 1 112222
Q ss_pred HHhcCCCc--ccccCchhHHHHHHhCCCCccceEEEECCCCc
Q 021505 169 YFGTMPWL--ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGK 208 (311)
Q Consensus 169 ~~~~~~~~--~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~ 208 (311)
++...... ......+.+.++.+.+||+++||+++ .+|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 152 AEKGNLPKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp HHTTCCCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred HHcCCCCChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 22221100 01112234568899999999999887 4565
No 248
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.29 E-value=9e-06 Score=67.03 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=42.7
Q ss_pred eeeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 101 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 101 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+.+....++++|+.|+..+||+|..+.+.+.++.++|.+. .++.|+...+.
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~ 70 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKS--------GKVERIIKLFD 70 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHT--------TSEEEEEEECC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhC--------CcEEEEEEeCC
Confidence 46666667899999999999999999999999999888432 35888887764
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.25 E-value=4.3e-06 Score=70.58 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=36.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.++++|+.|+..|||+|+.+.|.+.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~----------~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD----------DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC----------CeEEEEecCC
Confidence 478999999999999999999999888877654 4777777665
No 250
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.05 E-value=1.7e-05 Score=56.59 Aligned_cols=59 Identities=12% Similarity=0.260 Sum_probs=40.8
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|+...+.|.+ . ++.+..|++|.+.+ ..+..+.|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~---------~i~~~~vdi~~~~~--------------------~~~~~~~~ 46 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------R---------GFDFEMINVDRVPE--------------------AAEALRAQ 46 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------T---------TCCCEEEETTTCHH--------------------HHHHHHHT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------C---------CCCeEEEECCCCHH--------------------HHHHHHHh
Confidence 567999999999998887754 1 35677788876542 11223358
Q ss_pred CCCccceEEEECCCCcEE
Q 021505 193 DVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv 210 (311)
++.++|+++ + +|+.+
T Consensus 47 g~~~vP~~~-~--~g~~~ 61 (81)
T 1h75_A 47 GFRQLPVVI-A--GDLSW 61 (81)
T ss_dssp TCCSSCEEE-E--TTEEE
T ss_pred CCCccCEEE-E--CCEEE
Confidence 999999984 4 45543
No 251
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.95 E-value=0.00014 Score=60.55 Aligned_cols=135 Identities=12% Similarity=0.105 Sum_probs=81.0
Q ss_pred HHHhcCCCCCeEeeCCCCceeecc----ccCCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEE
Q 021505 82 INLLTNHDRGYLLGHPPDEKVPVS----SLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEV 154 (311)
Q Consensus 82 ~~~~g~~~pdf~l~~~g~~~v~l~----~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~v 154 (311)
.+..|...|.|-...=.. .+..+ .-.+|+++||+.++||+.|..+...+ .++.+-+++ ++.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~-Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~----------nfV~ 93 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEA-AFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ----------NFIT 93 (178)
T ss_dssp HHHHCSCCCCCCCSCHHH-HHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH----------TEEE
T ss_pred HHHhCCCCCCeeeCCHHH-HHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc----------CEEE
Confidence 444578888886422222 34444 55789999999999999999887544 334444544 4666
Q ss_pred EEEecCCCH--HHHHHHHhcCCCcccccCchhHHHH---HHhCCCCccceEEEECCCC---cEEEeccchhhhcccccCC
Q 021505 155 VFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKEL---TKYFDVQGIPCLVIIGPEG---KTVTKQGRNLINLYQENAY 226 (311)
Q Consensus 155 v~Vs~d~~~--~~~~~~~~~~~~~~~p~~~d~~~~l---~~~~~v~~~Pt~vlid~~G---~iv~~~g~~~~~~~g~~~~ 226 (311)
.+.+++.+. +.+..++...- ...+ .+.|++.++|+++||++.| +++.+ ..|.
T Consensus 94 w~~dv~~~e~~~~~~~~~~~~~----------g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~-------~~G~--- 153 (178)
T 2ec4_A 94 WAWDLTKDSNRARFLTMCNRHF----------GSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNV-------IQGN--- 153 (178)
T ss_dssp EEEECCSHHHHHHHHHHHHHHT----------CHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEE-------ECSC---
T ss_pred EEEeCCCchhhhhhhhhhhhhh----------HHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEE-------EeCC---
Confidence 666666433 12222222100 0123 3559999999999998764 56666 4453
Q ss_pred CCcHHHHHHHHHHHHHHhccC
Q 021505 227 PFTEAKLEFLEKQMEEEAKNL 247 (311)
Q Consensus 227 p~~~~~i~~L~~~~~~~~~~~ 247 (311)
.-.++.++.|.+.+++....+
T Consensus 154 ~~~~~ll~~L~~~~e~~~~~l 174 (178)
T 2ec4_A 154 TTVDELMMRLMAAMEIFTAQQ 174 (178)
T ss_dssp CCHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHhhHhh
Confidence 234556666666666544433
No 252
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.89 E-value=4.6e-05 Score=53.20 Aligned_cols=58 Identities=12% Similarity=0.189 Sum_probs=40.3
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|++..+.|.++ ++.+..++++.+.+. ...+ +.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----------------~i~~~~~di~~~~~~-------------------~~~~-~~~ 46 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----------------GLAYNTVDISLDDEA-------------------RDYV-MAL 46 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEETTTCHHH-------------------HHHH-HHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc----------------CCCcEEEECCCCHHH-------------------HHHH-HHc
Confidence 5678999999999988877542 355677777765410 1122 468
Q ss_pred CCCccceEEEECCCCcE
Q 021505 193 DVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~i 209 (311)
++.++|++++ +|+.
T Consensus 47 ~~~~vP~l~~---~g~~ 60 (75)
T 1r7h_A 47 GYVQAPVVEV---DGEH 60 (75)
T ss_dssp TCBCCCEEEE---TTEE
T ss_pred CCCccCEEEE---CCeE
Confidence 9999999873 5654
No 253
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.87 E-value=6.1e-06 Score=62.12 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=42.5
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH--HHHHHHHhcCCCcccccCchhHHHHHH
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTK 190 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~--~~~~~~~~~~~~~~~p~~~d~~~~l~~ 190 (311)
++.|+++||++|+...+.|.++...+ ++ +..+++|.+. .+. ...+.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~-----------~~--~~~vdi~~~~~~~~~------------------~~~l~~ 62 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE-----------GL--LEFVDITATSDTNEI------------------QDYLQQ 62 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT-----------TS--EEEEEGGGSTTHHHH------------------HHHHHH
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC-----------Cc--cEEEEccCCCCHHHH------------------HHHHHH
Confidence 56699999999999988876532211 12 4455665431 110 236778
Q ss_pred hCCCCccceEEEECCCCcEEE
Q 021505 191 YFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 191 ~~~v~~~Pt~vlid~~G~iv~ 211 (311)
.+++.++|+++ + +|+.+.
T Consensus 63 ~~g~~~vP~i~-~--~g~~i~ 80 (105)
T 1kte_A 63 LTGARTVPRVF-I--GKECIG 80 (105)
T ss_dssp HHSCCCSCEEE-E--TTEEEE
T ss_pred HhCCCCcCeEE-E--CCEEEe
Confidence 89999999975 4 577664
No 254
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.84 E-value=1.6e-05 Score=61.16 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=43.6
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeE---EEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE---VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~---vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.++.|+++|||+|++..+.|.++ ++. +..|++|.+.+. ......+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~----------------~~~~~~~~~vdi~~~~~~----------------~~~~~~l 67 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKF----------------SFKRGAYEIVDIKEFKPE----------------NELRDYF 67 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTS----------------CBCTTSEEEEEGGGSSSH----------------HHHHHHH
T ss_pred CEEEEEeCCChhHHHHHHHHHHc----------------CCCcCceEEEEccCCCCh----------------HHHHHHH
Confidence 46679999999999888876532 233 666666654200 0013478
Q ss_pred HHhCCCCccceEEEECCCCcEEE
Q 021505 189 TKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
.+.+|+.++|++++ +|+.+.
T Consensus 68 ~~~~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 68 EQITGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHhCCCCcCEEEE---CCEEEe
Confidence 88899999998754 577764
No 255
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.75 E-value=0.00012 Score=59.14 Aligned_cols=91 Identities=20% Similarity=0.269 Sum_probs=57.0
Q ss_pred eeccccCCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-----CCH-------------
Q 021505 102 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQ------------- 163 (311)
Q Consensus 102 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d-----~~~------------- 163 (311)
+.+..-.++++|+.|+-++||+|+++.+.|.++ . ++.|+++.+- .+.
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-----------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~ 71 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM----T-----------DVTVYSFMMPIAGLHPDAARKAQILWCQPDR 71 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC----C-----------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSH
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc----C-----------ceEEEEEEccccccChhHHHHHHHHHcCCCH
Confidence 334444578999999999999999999987543 1 4666666432 111
Q ss_pred -HHHHHHHhcCCCc----ccccCchhHHHHHHhCCCCccceEEEECCCCcE
Q 021505 164 -TSFESYFGTMPWL----ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 164 -~~~~~~~~~~~~~----~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+.|...+...... ...-..+.+.++.+.+||+++||+++ .+|++
T Consensus 72 ~~a~~~~~~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 72 AKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp HHHHHHHHHHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred HHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 1233322211100 01112335678999999999999998 46764
No 256
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=7.5e-05 Score=58.80 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=41.6
Q ss_pred EecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCC
Q 021505 116 FSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ 195 (311)
Q Consensus 116 F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~ 195 (311)
|+++||++|+...+.|.++ ++.+..|.+|.+.+. ......+.+.+++.
T Consensus 32 f~~~~Cp~C~~~~~~L~~~----------------~i~~~~vdid~~~~~----------------~~~~~~l~~~~g~~ 79 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM----------------NVNYKVVELDLLEYG----------------NQFQDALYKMTGER 79 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH----------------TCCCEEEETTTSTTH----------------HHHHHHHHHHHSSC
T ss_pred EEcCCChHHHHHHHHHHHc----------------CCCcEEEECcCCcCc----------------HHHHHHHHHHhCCC
Confidence 9999999999988877653 233556666654100 00023578889999
Q ss_pred ccceEEEECCCCcEEEe
Q 021505 196 GIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 196 ~~Pt~vlid~~G~iv~~ 212 (311)
.+|+++ + +|+.+..
T Consensus 80 ~vP~l~-i--~G~~igg 93 (130)
T 2cq9_A 80 TVPRIF-V--NGTFIGG 93 (130)
T ss_dssp CSSEEE-E--TTEEEEE
T ss_pred CcCEEE-E--CCEEEcC
Confidence 999985 4 6777653
No 257
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.72 E-value=0.00043 Score=59.51 Aligned_cols=68 Identities=12% Similarity=0.180 Sum_probs=52.4
Q ss_pred CEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHH
Q 021505 110 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 189 (311)
Q Consensus 110 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 189 (311)
+.+++.|...||..|....+.+.+++++++++ +.++.|..+... ...+.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~----------i~F~~vd~~~~~---------------------~~~~l 180 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK----------ILFILVDSGMKE---------------------NGKVI 180 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT----------CEEEEEETTSGG---------------------GHHHH
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC----------EEEEEeCCccHh---------------------HHHHH
Confidence 34566677889999999999999999988753 667777665433 44677
Q ss_pred HhCCCC--ccceEEEECCCCc
Q 021505 190 KYFDVQ--GIPCLVIIGPEGK 208 (311)
Q Consensus 190 ~~~~v~--~~Pt~vlid~~G~ 208 (311)
+.||+. .+|++++++..+.
T Consensus 181 ~~fgl~~~~~P~~~i~~~~~~ 201 (227)
T 4f9z_D 181 SFFKLKESQLPALAIYQTLDD 201 (227)
T ss_dssp HHTTCCGGGCSEEEEEESSSC
T ss_pred HHcCCCcccCCEEEEEECCCC
Confidence 899998 8999999986543
No 258
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.72 E-value=0.00012 Score=61.70 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=75.1
Q ss_pred eeecccc--CCCEEEEEEe-cCCChhhHh-hhHHHHHHHHHH-HhhhhhcCCCCCCe-EEEEEecCCC--HHHHHHHHhc
Q 021505 101 KVPVSSL--VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKI-KQNLVEKGDALEDF-EVVFVSTDRD--QTSFESYFGT 172 (311)
Q Consensus 101 ~v~l~~~--~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~-~~~~~~~~~~~~~~-~vv~Vs~d~~--~~~~~~~~~~ 172 (311)
++++++. +||.|+|++. +.+.|.|.. .+|.+.+.++++ +.+ ++ +|+.||+|+. ..+|.+....
T Consensus 59 ~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k---------Gvd~I~ciSVND~FVm~AW~k~~~~ 129 (199)
T 4h86_A 59 TVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK---------EVDQVIVVTVDNPFANQAWAKSLGV 129 (199)
T ss_dssp EEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS---------CCCEEEEEESSCHHHHHHHHHHTTC
T ss_pred eeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc---------CCcEEEEEEcCCHHHHHHHHHHhcc
Confidence 5777764 6888877765 688999976 699998888875 544 34 7999999874 3566665543
Q ss_pred CCCcccccCchhHHHHHHhCCCC---------ccceEEEECCCCcEEEec
Q 021505 173 MPWLALPFGDPTIKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 173 ~~~~~~p~~~d~~~~l~~~~~v~---------~~Pt~vlid~~G~iv~~~ 213 (311)
..-..+++..|.+.++.+.+|+. +....+||| ||+|....
T Consensus 130 ~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~ 178 (199)
T 4h86_A 130 KDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAA 178 (199)
T ss_dssp CCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEE
T ss_pred cccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEE
Confidence 33356778888899999999973 335577886 89988763
No 259
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.67 E-value=9.1e-05 Score=59.67 Aligned_cols=59 Identities=17% Similarity=0.239 Sum_probs=40.5
Q ss_pred EecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH--HHHHHHHhcCCCcccccCchhHHHHHHhCC
Q 021505 116 FSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTKYFD 193 (311)
Q Consensus 116 F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~--~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~ 193 (311)
|+++||++|+...+.|.++ ++.+..|.+|.+. .+ ....+.+.++
T Consensus 54 f~~~~Cp~C~~~k~~L~~~----------------~i~~~~vdId~~~~~~~------------------~~~~L~~~~g 99 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM----------------NVNYKVVELDLLEYGNQ------------------FQDALYKMTG 99 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH----------------TCCCEEEEGGGCTTHHH------------------HHHHHHHHHS
T ss_pred EECCCChhHHHHHHHHHHc----------------CCCeEEEECccCcCCHH------------------HHHHHHHHhC
Confidence 9999999999998877653 1334455555431 11 0236788899
Q ss_pred CCccceEEEECCCCcEEE
Q 021505 194 VQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 194 v~~~Pt~vlid~~G~iv~ 211 (311)
+.++|+++ + +|+.+.
T Consensus 100 ~~tvP~if-i--~G~~ig 114 (146)
T 2ht9_A 100 ERTVPRIF-V--NGTFIG 114 (146)
T ss_dssp CCCSCEEE-E--TTEEEE
T ss_pred CCCcCeEE-E--CCEEEe
Confidence 99999985 4 677664
No 260
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.63 E-value=0.00017 Score=51.17 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=42.0
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|++..+.|.+. ++.+..+++|.+.+. ..++.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----------------~i~~~~~~i~~~~~~-------------------~~~~~~~~ 47 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK----------------GVSFQELPIDGNAAK-------------------REEMIKRS 47 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH----------------TCCCEEEECTTCSHH-------------------HHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC----------------CCCcEEEECCCCHHH-------------------HHHHHHHh
Confidence 4568899999999988877542 244556666654211 34677788
Q ss_pred CCCccceEEEECCCCcEEE
Q 021505 193 DVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv~ 211 (311)
++..+|+++ + +|+.+.
T Consensus 48 ~~~~vP~l~-~--~g~~i~ 63 (82)
T 1fov_A 48 GRTTVPQIF-I--DAQHIG 63 (82)
T ss_dssp SSCCSCEEE-E--TTEEEE
T ss_pred CCCCcCEEE-E--CCEEEe
Confidence 999999985 3 576654
No 261
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.61 E-value=0.00035 Score=52.36 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=37.7
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC-HHHHHHHHhcCCCcccccCchhHHHHHH
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD-QTSFESYFGTMPWLALPFGDPTIKELTK 190 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~-~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 190 (311)
.++.|+++|||+|++..+.|.++ ++.+-.+.+|.. .++..+. ...+.+
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~----------------~i~y~~vdI~~~~~~~~~~~---------------~~~l~~ 71 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL----------------GVDFDYVYVDRLEGKEEEEA---------------VEEVRR 71 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH----------------TBCEEEEEGGGCCHHHHHHH---------------HHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc----------------CCCcEEEEeeccCcccHHHH---------------HHHHHH
Confidence 45568999999999998877643 233445555542 2111111 124456
Q ss_pred hCCCCccceEEE
Q 021505 191 YFDVQGIPCLVI 202 (311)
Q Consensus 191 ~~~v~~~Pt~vl 202 (311)
.+++.++|++++
T Consensus 72 ~~g~~~vP~l~i 83 (103)
T 3nzn_A 72 FNPSVSFPTTII 83 (103)
T ss_dssp HCTTCCSCEEEE
T ss_pred hCCCCccCEEEE
Confidence 689999999776
No 262
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.56 E-value=9.1e-05 Score=53.89 Aligned_cols=58 Identities=12% Similarity=0.157 Sum_probs=41.0
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|++..+.|.+. ++.+..+++| .+ ...++.+.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~----------------~i~~~~vdv~--~~-------------------~~~~l~~~~ 50 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK----------------GVKYTDIDAS--TS-------------------LRQEMVQRA 50 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH----------------TCCEEEECSC--HH-------------------HHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc----------------CCCcEEEECC--HH-------------------HHHHHHHHh
Confidence 5678999999999988876542 2446666666 21 034677888
Q ss_pred -CCCccceEEEECCCCcEE
Q 021505 193 -DVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 193 -~v~~~Pt~vlid~~G~iv 210 (311)
++.++|++++ +|+.+
T Consensus 51 ~~~~~vP~l~~---~g~~i 66 (89)
T 2klx_A 51 NGRNTFPQIFI---GDYHV 66 (89)
T ss_dssp HSSCCSCEEEE---TTEEC
T ss_pred CCCCCcCEEEE---CCEEE
Confidence 9999999853 56654
No 263
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.56 E-value=0.00025 Score=61.54 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=26.2
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEec
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 213 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~~ 213 (311)
...++++|||.++|++++++++|++...+
T Consensus 194 ~~~l~~~f~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 194 EANVVRKFGVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp CHHHHHHHTCCCSSEEEEEETTSCEEECC
T ss_pred hHHHHHHcCCCCCCeEEEEeCCCCeEeec
Confidence 45899999999999999999999998774
No 264
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.54 E-value=0.00021 Score=58.81 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=28.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHh
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQ 140 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~ 140 (311)
.++++|+.|+...||+|.++.+.+.++.+++.+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC
Confidence 468899999999999999999999888888764
No 265
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.52 E-value=0.00014 Score=56.29 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=42.3
Q ss_pred EEEEecCCChhhHhh-hHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 113 GLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 113 ll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
++.|+++|||+|++. .+.|.++.. ..+.+..|++|.+... ......+.+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-------------~~i~~~~vdid~~~~~----------------~~~~~~l~~~ 77 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-------------PRSKVLVLQLNDMKEG----------------ADIQAALYEI 77 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-------------CGGGEEEEEGGGSTTH----------------HHHHHHHHHH
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-------------CCCCeEEEECccCCCh----------------HHHHHHHHHH
Confidence 445999999999988 665533210 1155677777654310 0013468888
Q ss_pred CCCCccceEEEECCCCcEEE
Q 021505 192 FDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv~ 211 (311)
+|+.++|+++ + +|+.+.
T Consensus 78 ~g~~tvP~vf-i--~g~~ig 94 (118)
T 3c1r_A 78 NGQRTVPNIY-I--NGKHIG 94 (118)
T ss_dssp HSCCSSCEEE-E--TTEEEE
T ss_pred hCCCCcCEEE-E--CCEEEE
Confidence 9999999874 4 577654
No 266
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.50 E-value=0.00042 Score=51.82 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=43.0
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
-++.|+++|||+|++....|.++ ++.+..|.+|.+.+. ..++.+.
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~----------------~i~y~~idI~~~~~~-------------------~~~l~~~ 61 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRK----------------GVEFQEYCIDGDNEA-------------------REAMAAR 61 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH----------------TCCCEEEECTTCHHH-------------------HHHHHHH
T ss_pred CEEEEEcCCChhHHHHHHHHHHC----------------CCCCEEEEcCCCHHH-------------------HHHHHHH
Confidence 45569999999999998877642 345666777765421 2356666
Q ss_pred C-CCCccceEEEECCCCcEEE
Q 021505 192 F-DVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~-~v~~~Pt~vlid~~G~iv~ 211 (311)
. +...+|+++ + +|+.+.
T Consensus 62 ~~g~~~vP~if-i--~g~~ig 79 (99)
T 3qmx_A 62 ANGKRSLPQIF-I--DDQHIG 79 (99)
T ss_dssp TTTCCCSCEEE-E--TTEEEE
T ss_pred hCCCCCCCEEE-E--CCEEEe
Confidence 6 899999874 4 566654
No 267
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.44 E-value=0.00045 Score=50.30 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=41.9
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
++.|+++||++|++..+.|.+. ++.+..++++.+... ..++.+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~----------------~i~~~~~di~~~~~~-------------------~~~l~~~~ 52 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK----------------GAEFNEIDASATPEL-------------------RAEMQERS 52 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEESTTSHHH-------------------HHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc----------------CCCcEEEECCCCHHH-------------------HHHHHHHh
Confidence 5678999999999887766531 355667777754311 34677788
Q ss_pred CCCccceEEEECCCCcEEE
Q 021505 193 DVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv~ 211 (311)
++..+|++ ++ +|+.+.
T Consensus 53 ~~~~vP~l-~~--~g~~i~ 68 (92)
T 2khp_A 53 GRNTFPQI-FI--GSVHVG 68 (92)
T ss_dssp TSSCCCEE-EE--TTEEEE
T ss_pred CCCCcCEE-EE--CCEEEc
Confidence 99999965 44 566554
No 268
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.43 E-value=0.00081 Score=49.62 Aligned_cols=62 Identities=16% Similarity=0.323 Sum_probs=41.8
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh-
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY- 191 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~- 191 (311)
+..|+.+|||+|.+....|.+ + ++.+..+++|.+.+. ...+.+.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~---------gi~y~~idi~~d~~~-------------------~~~~~~~~ 50 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------N---------RIAYDEVDIEHNRAA-------------------AEFVGSVN 50 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------T---------TCCCEEEETTTCHHH-------------------HHHHHHHS
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------c---------CCceEEEEcCCCHHH-------------------HHHHHHHc
Confidence 456889999999987766543 2 567778888877633 2233333
Q ss_pred CCCCccceEEEECCCCcEEE
Q 021505 192 FDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv~ 211 (311)
.|.+.+|++++ .||.++.
T Consensus 51 ~G~~tVP~I~i--~Dg~~l~ 68 (92)
T 2lqo_A 51 GGNRTVPTVKF--ADGSTLT 68 (92)
T ss_dssp SSSSCSCEEEE--TTSCEEE
T ss_pred CCCCEeCEEEE--eCCEEEe
Confidence 37889998765 5676654
No 269
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.39 E-value=0.0004 Score=52.23 Aligned_cols=61 Identities=23% Similarity=0.225 Sum_probs=41.8
Q ss_pred EEEEEec-----CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 112 VGLYFSA-----RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 112 vll~F~a-----~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
|+| |+. +||++|++..+.|.++ ++.+..++++.+.+. ..
T Consensus 19 vvv-f~~g~~~~~~C~~C~~~~~~L~~~----------------~i~~~~vdi~~~~~~-------------------~~ 62 (105)
T 2yan_A 19 VML-FMKGNKQEAKCGFSKQILEILNST----------------GVEYETFDILEDEEV-------------------RQ 62 (105)
T ss_dssp EEE-EESBCSSSBCTTHHHHHHHHHHHH----------------TCCCEEEEGGGCHHH-------------------HH
T ss_pred EEE-EEecCCCCCCCccHHHHHHHHHHC----------------CCCeEEEECCCCHHH-------------------HH
Confidence 555 555 9999999988877542 245667777765411 33
Q ss_pred HHHHhCCCCccceEEEECCCCcEEE
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
.+.+.+|+.++|+++ + +|+.+.
T Consensus 63 ~l~~~~g~~~vP~v~-i--~g~~ig 84 (105)
T 2yan_A 63 GLKAYSNWPTYPQLY-V--KGELVG 84 (105)
T ss_dssp HHHHHHTCCSSCEEE-E--TTEEEE
T ss_pred HHHHHHCCCCCCeEE-E--CCEEEe
Confidence 567778999999985 4 577654
No 270
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.36 E-value=0.00092 Score=48.60 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=39.9
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC-HHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD-QTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~-~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
++.|+++||++|++..+.|.++ ++.+-.+.++.. .++-.+ ...++.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~----------------gi~~~~~~v~~~~~~~~~~---------------~~~~l~~~ 62 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE----------------GVDFEVIWIDKLEGEERKK---------------VIEKVHSI 62 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH----------------TCCCEEEEGGGCCHHHHHH---------------HHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc----------------CCCcEEEEeeeCCccchHH---------------HHHHHHHh
Confidence 4568999999999988776543 233444555531 100000 02467788
Q ss_pred CCCCccceEEEECCCCcEE
Q 021505 192 FDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv 210 (311)
+++..+|++++ +|+.+
T Consensus 63 ~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 63 SGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HSSSCSCEEEE---TTEEE
T ss_pred cCCCCcCEEEE---CCEEE
Confidence 89999999886 56554
No 271
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.33 E-value=0.00016 Score=67.04 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=24.6
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
|++.+..|+++|+|+++||++++. +|+.+..
T Consensus 76 d~~~~~~l~~~~~V~~~PTl~~f~----~G~~~~y 106 (367)
T 3us3_A 76 DSEKDAAVAKKLGLTEEDSIYVFK----EDEVIEY 106 (367)
T ss_dssp ETTTTHHHHHHHTCCSTTEEEEEE----TTEEEEC
T ss_pred eCcccHHHHHHcCCCcCceEEEEE----CCcEEEe
Confidence 445568899999999999999998 5665433
No 272
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.31 E-value=0.00025 Score=57.74 Aligned_cols=59 Identities=29% Similarity=0.599 Sum_probs=49.3
Q ss_pred CCccccccCCHHHHHHHHhhcccCCCCeeEEecCCCCC-CceeechhhH-HHhhhccccCcccH
Q 021505 1 MPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDK-DDATLHDGVE-LIYKYGIRAFPFTK 62 (311)
Q Consensus 1 ~~w~a~p~~d~~~~~~l~~~~~i~~~P~l~~~~~~~~~-g~~~~~~~~~-~v~~~~~~~~p~~~ 62 (311)
++|+.+|+...+....+++.|+|.++|+++++++ + |+++...+.. ...+.....|||..
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~---~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 104 MPWLSIPFANRNIVEALTKKYSVESIPTLIGLNA---DTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp CSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEET---TTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CCCcccccCchhHHHHHHHHcCCCCCCEEEEEeC---CCCEEEecccHHHHhhCcccccCCCCC
Confidence 5789999988777789999999999999999997 7 9999887755 55556677899864
No 273
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.28 E-value=0.00054 Score=52.11 Aligned_cols=62 Identities=18% Similarity=0.376 Sum_probs=40.3
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCC---HHHHHHHHhcCCCcccccCchhHHHHH
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD---QTSFESYFGTMPWLALPFGDPTIKELT 189 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~---~~~~~~~~~~~~~~~~p~~~d~~~~l~ 189 (311)
++.|+++|||+|++..+.|.++ ++.+-.+.+|.+ ..+. ...+.
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~----------------~i~~~~~di~~~~~~~~~~------------------~~~l~ 66 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL----------------GVQPLVVELDQLGPQGPQL------------------QKVLE 66 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEEGGGSTTHHHHH------------------HHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc----------------CCCCeEEEeecCCCChHHH------------------HHHHH
Confidence 4559999999999888877542 233445555542 1111 22466
Q ss_pred HhCCCCccceEEEECCCCcEEE
Q 021505 190 KYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 190 ~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
+.+|+..+|+++ + +|+.+.
T Consensus 67 ~~~g~~tvP~if-i--~g~~ig 85 (113)
T 3rhb_A 67 RLTGQHTVPNVF-V--CGKHIG 85 (113)
T ss_dssp HHHSCCSSCEEE-E--TTEEEE
T ss_pred HHhCCCCcCEEE-E--CCEEEc
Confidence 667999999985 4 577664
No 274
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.27 E-value=0.00029 Score=64.66 Aligned_cols=57 Identities=7% Similarity=0.000 Sum_probs=40.2
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.++++|.|+++||.. ..+.+.++++.+++ ++.+..++ +..+
T Consensus 142 ~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~----------~~~f~~~~--------------------------~~~~ 182 (350)
T 1sji_A 142 DQIKLIGFFKSEESE---YYKAFEEAAEHFQP----------YIKFFATF--------------------------DKGV 182 (350)
T ss_dssp SSCEEEEECSCTTSH---HHHHHHHHHHHTTT----------TSEEEEEC--------------------------CHHH
T ss_pred CCcEEEEEECCCCcH---HHHHHHHHHHhhcc----------CcEEEEEC--------------------------CHHH
Confidence 356788888888644 45677777777754 35555442 2368
Q ss_pred HHhCCCCccceEEEECC
Q 021505 189 TKYFDVQGIPCLVIIGP 205 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~ 205 (311)
++.|++. .|+++++.+
T Consensus 183 ~~~~~v~-~p~i~~~~~ 198 (350)
T 1sji_A 183 AKKLSLK-MNEVDFYEP 198 (350)
T ss_dssp HHHHTCC-TTCEEEECT
T ss_pred HHHcCCC-CCcEEEEeC
Confidence 8899999 999999965
No 275
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.13 E-value=0.0011 Score=47.60 Aligned_cols=64 Identities=8% Similarity=0.083 Sum_probs=39.5
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
.++.|+++|||+|++....|.++ +-.++++-|+.+.+... ..++.+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~--------------~i~~~~~~vd~~~~~~~-------------------~~el~~~ 51 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN--------------NIAFDETIIDDYAQRSK-------------------FYDEMNQ 51 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------------TCCCEEEECCSHHHHHH-------------------HHHHHHT
T ss_pred EEEEEEcCCChhHHHHHHHHHHc--------------CCCceEEEeecCCChhH-------------------HHHHHHH
Confidence 36678999999999887766432 11344444433322111 2356666
Q ss_pred CCC-----CccceEEEECCCCcEEE
Q 021505 192 FDV-----QGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~~v-----~~~Pt~vlid~~G~iv~ 211 (311)
+|. ..+|++++ +|+.+.
T Consensus 52 ~g~~~~~~~~vP~i~i---~g~~i~ 73 (89)
T 3msz_A 52 SGKVIFPISTVPQIFI---DDEHIG 73 (89)
T ss_dssp TTCCSSCCCSSCEEEE---TTEEEE
T ss_pred hCCCCCCCCccCEEEE---CCEEEe
Confidence 777 99999865 677664
No 276
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.09 E-value=0.00057 Score=66.31 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=24.4
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
...+.++|||..+|++++++++|++...
T Consensus 194 ~~~l~~kfgV~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 194 ESDLVNKFGVTDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp CHHHHHHHTCCCSSEEEEEETTSCEEEC
T ss_pred hHHHHHHcCCCCCCeEEEEeCCCceeec
Confidence 3589999999999999999999987544
No 277
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.93 E-value=0.0064 Score=52.35 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=37.2
Q ss_pred eccccCCCEEEEEEecCCChhhHhhhHHH-HHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 103 PVSSLVGKTVGLYFSARWCIPCEKFMPKL-LSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 103 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l-~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.+..-.++++|+.|+...||+|.++.+.+ .++.++|.+ ..++.+++..+.
T Consensus 33 ~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~--------~g~V~~v~~~~p 83 (226)
T 3f4s_A 33 LLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYID--------TGKMLYIFRHFP 83 (226)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTT--------TTSEEEEEEECC
T ss_pred ccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHccc--------CCeEEEEEEeCC
Confidence 33344567899999999999999999864 677778853 235888877664
No 278
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=96.90 E-value=0.0017 Score=50.99 Aligned_cols=58 Identities=29% Similarity=0.621 Sum_probs=47.5
Q ss_pred CCccccccCCHHHHHHHHhhcccCCCCeeEEec-CCCCCCceeechhhHHHhhh-ccccCccc
Q 021505 1 MPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKY-GIRAFPFT 61 (311)
Q Consensus 1 ~~w~a~p~~d~~~~~~l~~~~~i~~~P~l~~~~-~~~~~g~~~~~~~~~~v~~~-~~~~~p~~ 61 (311)
++|+.+|+...+....+.++|+|.++|++++++ + +|+++...+...+.+. ....|||.
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 84 MPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEAD---SGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CCccccccCchHHHHHHHHHcCCCCCCEEEEEECC---CCcEEeccchhhhhhCcccccCCCC
Confidence 468888987667778999999999999999999 7 8999988887766665 35667774
No 279
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.79 E-value=0.0027 Score=48.49 Aligned_cols=60 Identities=17% Similarity=0.299 Sum_probs=39.8
Q ss_pred EEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--CHHHHHHHHhcCCCcccccCchhHHHHHHhC
Q 021505 115 YFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR--DQTSFESYFGTMPWLALPFGDPTIKELTKYF 192 (311)
Q Consensus 115 ~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~--~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 192 (311)
.|+.+|||+|.+..+.|.++ ++.+-.+.+|. +..++ ...+.+..
T Consensus 21 vy~~~~Cp~C~~ak~~L~~~----------------~i~~~~~dvd~~~~~~~~------------------~~~l~~~~ 66 (114)
T 3h8q_A 21 IFSKSYCPHSTRVKELFSSL----------------GVECNVLELDQVDDGARV------------------QEVLSEIT 66 (114)
T ss_dssp EEECTTCHHHHHHHHHHHHT----------------TCCCEEEETTTSTTHHHH------------------HHHHHHHH
T ss_pred EEEcCCCCcHHHHHHHHHHc----------------CCCcEEEEecCCCChHHH------------------HHHHHHHh
Confidence 39999999999888777542 23445556664 32111 13456677
Q ss_pred CCCccceEEEECCCCcEEE
Q 021505 193 DVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 193 ~v~~~Pt~vlid~~G~iv~ 211 (311)
|...+|++++ +|+.+.
T Consensus 67 g~~tvP~vfi---~g~~ig 82 (114)
T 3h8q_A 67 NQKTVPNIFV---NKVHVG 82 (114)
T ss_dssp SCCSSCEEEE---TTEEEE
T ss_pred CCCccCEEEE---CCEEEe
Confidence 8899999876 677664
No 280
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=96.78 E-value=0.002 Score=50.38 Aligned_cols=58 Identities=26% Similarity=0.543 Sum_probs=47.3
Q ss_pred CCccccccCCHHHHHHHHhhcccCCCCeeEEec-CCCCCCceeechhhHHHhhh-ccccCccc
Q 021505 1 MPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKY-GIRAFPFT 61 (311)
Q Consensus 1 ~~w~a~p~~d~~~~~~l~~~~~i~~~P~l~~~~-~~~~~g~~~~~~~~~~v~~~-~~~~~p~~ 61 (311)
++|+.+|+...+....+.++|+|.++|++++++ + +|+++...+...+.+. ....|||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 84 MPWLALPFDQRSTVSELGKTFGVESIPTLITINAD---TGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CCceEeeccchhHHHHHHHHcCCCCCCEEEEEECC---CCeEEecchhhHHhhCCCccCCCCC
Confidence 468889998767778999999999999999999 7 8999988887666554 35567774
No 281
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.73 E-value=0.0024 Score=50.04 Aligned_cols=67 Identities=12% Similarity=0.209 Sum_probs=39.7
Q ss_pred EEEEecCCChhhHhh-hHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 113 GLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 113 ll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
++.|+.+|||+|++. .+.|.++... .+.+..|.+|.+.+. ......+.+.
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~-------------~i~~~~vdvd~~~~~----------------~~~~~~L~~~ 89 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP-------------KSKALVLELDEMSNG----------------SEIQDALEEI 89 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC-------------GGGEEEEEGGGSTTH----------------HHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc-------------CCCcEEEEccccCCH----------------HHHHHHHHHH
Confidence 456899999999988 6655432100 133455555543200 0002467888
Q ss_pred CCCCccceEEEECCCCcEEE
Q 021505 192 FDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv~ 211 (311)
+|+..+|+++ + +|+.+.
T Consensus 90 ~g~~tVP~vf-i--~g~~ig 106 (129)
T 3ctg_A 90 SGQKTVPNVY-I--NGKHIG 106 (129)
T ss_dssp HSCCSSCEEE-E--TTEEEE
T ss_pred hCCCCCCEEE-E--CCEEEc
Confidence 8999999964 4 466553
No 282
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=96.60 E-value=0.0026 Score=50.08 Aligned_cols=59 Identities=31% Similarity=0.620 Sum_probs=46.4
Q ss_pred CCccccccCCHHHHHHHHhhcccCCCCeeEEec-CCCCCCceeechhhHHHhhh-ccccCcccH
Q 021505 1 MPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKY-GIRAFPFTK 62 (311)
Q Consensus 1 ~~w~a~p~~d~~~~~~l~~~~~i~~~P~l~~~~-~~~~~g~~~~~~~~~~v~~~-~~~~~p~~~ 62 (311)
++|+.+|+...+....++++|+|.++|++++++ + +|+++...+...+.+. ....|||..
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 84 MPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDAD---SGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp CSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred CCceeeccchhhHHHHHHHHhCCCCCCEEEEEECC---CCeEEEecchhHHhhCCccccCCCCC
Confidence 468888887656778999999999999999999 7 8999887776655444 456677753
No 283
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.45 E-value=0.0075 Score=45.48 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=41.1
Q ss_pred EEEEEec----CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 112 VGLYFSA----RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 112 vll~F~a----~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
|+||+.+ +||++|++....|.++ ++.+..|+++.+.+. ...
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~----------------~i~~~~vdi~~~~~~-------------------~~~ 61 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNST----------------GVEYETFDILEDEEV-------------------RQG 61 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHHT----------------CSCEEEEESSSCHHH-------------------HHH
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHHc----------------CCCeEEEECCCCHHH-------------------HHH
Confidence 5554444 9999999888776432 456777787765421 335
Q ss_pred HHHhCCCCccceEEEECCCCcEEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv~ 211 (311)
+.+.+|...+|.++ + +|+.+.
T Consensus 62 l~~~~g~~~vP~if-i--~g~~ig 82 (109)
T 1wik_A 62 LKTFSNWPTYPQLY-V--RGDLVG 82 (109)
T ss_dssp HHHHHSCCSSCEEE-C--SSSEEE
T ss_pred HHHHhCCCCCCEEE-E--CCEEEc
Confidence 66777889999854 4 566553
No 284
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.43 E-value=0.00073 Score=56.44 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=33.5
Q ss_pred CCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
.++++++.|++.|||+|+.+.|.+ .++.+++.+ ++.++.+.++-
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~----------~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ----------GSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT----------TCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC----------CCEEEEEechh
Confidence 457899999999999999999986 455555542 57777777653
No 285
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.00 E-value=0.03 Score=40.08 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=40.2
Q ss_pred EEEEecC----CChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC-----CCHHHHHHHHhcCCCcccccCch
Q 021505 113 GLYFSAR----WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQTSFESYFGTMPWLALPFGDP 183 (311)
Q Consensus 113 ll~F~a~----wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d-----~~~~~~~~~~~~~~~~~~p~~~d 183 (311)
++.|+.+ |||+|.+....|.+ + ++.+-.++++ .+.+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~---------gi~y~~idI~~~~~~~~~~~------------------ 47 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------K---------KQPFEFINIMPEKGVFDDEK------------------ 47 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------T---------TCCEEEEESCSBTTBCCHHH------------------
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------c---------CCCEEEEEeeccccccCHHH------------------
Confidence 3457789 99999987766543 2 3556667766 33211
Q ss_pred hHHHHHHhCCCC-----ccceEEEECCCCcEEE
Q 021505 184 TIKELTKYFDVQ-----GIPCLVIIGPEGKTVT 211 (311)
Q Consensus 184 ~~~~l~~~~~v~-----~~Pt~vlid~~G~iv~ 211 (311)
..++.+.+|.. .+|.+++ ++|+.+.
T Consensus 48 -~~~l~~~~g~~~~~~~tvP~v~i--~~g~~ig 77 (87)
T 1aba_A 48 -IAELLTKLGRDTQIGLTMPQVFA--PDGSHIG 77 (87)
T ss_dssp -HHHHHHHHTCSCCTTCCSCEEEC--TTSCEEE
T ss_pred -HHHHHHHhCCCCCCCCccCEEEE--ECCEEEe
Confidence 34666777887 8998765 4677653
No 286
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.97 E-value=0.0035 Score=52.08 Aligned_cols=30 Identities=23% Similarity=0.122 Sum_probs=28.2
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKI 138 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~ 138 (311)
++++||.|+..|||+|.++.|.+.++.+++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 689999999999999999999999998887
No 287
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.73 E-value=0.0045 Score=42.18 Aligned_cols=31 Identities=26% Similarity=0.830 Sum_probs=28.1
Q ss_pred cccccccCC-CcceeEeCCCC-CCCcccccccc
Q 021505 272 FICCDCDEQ-GSGWAYQCLEC-GYEVHPKCVRA 302 (311)
Q Consensus 272 ~~Cd~C~~~-g~~w~~~C~~c-~~~~h~~c~~~ 302 (311)
..|++|++. ..+-.|.|..| +|||...|-..
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~ 44 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWR 44 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHH
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhC
Confidence 789999987 67999999999 89999999765
No 288
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.49 E-value=0.023 Score=47.71 Aligned_cols=23 Identities=17% Similarity=0.466 Sum_probs=17.5
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
.....+.+||.++|+++| +|+..
T Consensus 39 ~~~~a~~~gi~gvP~fvi---ngk~~ 61 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV---NGKYQ 61 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTTEE
T ss_pred HHHHHHHcCCCcCCEEEE---cceEe
Confidence 346788999999999865 56644
No 289
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=95.47 E-value=0.0049 Score=39.72 Aligned_cols=31 Identities=23% Similarity=0.693 Sum_probs=27.0
Q ss_pred cccccccCCCcceeEeCCCCCCCccccccccc
Q 021505 272 FICCDCDEQGSGWAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 272 ~~Cd~C~~~g~~w~~~C~~c~~~~h~~c~~~~ 303 (311)
-.|+.|+++.. .-+.|..|+|-.|++|+..+
T Consensus 15 t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 15 QVCNVCQKSMI-FGVKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCCSSSCCSSC-CEEEETTTTEEESSSCTTTS
T ss_pred cCccccCceeE-CcCCCCCCCCccchhhcCcC
Confidence 68999999885 45899999999999999753
No 290
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=95.43 E-value=0.046 Score=48.26 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=26.2
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQK 137 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~ 137 (311)
.|+.+++.|+-+.||+|+++.+.|.+..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 578999999999999999999999876653
No 291
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.043 Score=49.02 Aligned_cols=22 Identities=45% Similarity=0.907 Sum_probs=19.7
Q ss_pred HHHHHHhhcccCCCCeeEEecC
Q 021505 13 TKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
....|+++|+|.++|+++++..
T Consensus 79 ~~~~l~~~~~I~~~Pt~~~~~~ 100 (298)
T 3ed3_A 79 KNKALCAKYDVNGFPTLMVFRP 100 (298)
T ss_dssp TTHHHHHHTTCCBSSEEEEEEC
T ss_pred cCHHHHHhCCCCccceEEEEEC
Confidence 4688999999999999999983
No 292
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.99 E-value=0.0098 Score=49.66 Aligned_cols=43 Identities=19% Similarity=0.318 Sum_probs=33.8
Q ss_pred CCCEEEEEEecCCChhhHhhhHHH---HHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.++++|+.|+..+||+|.++.|.| .++.+++.+ ++.|+.+.+.
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~----------~v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE----------GTKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT----------TCCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCC----------CcEEEEEecc
Confidence 458899999999999999999987 577777754 3666666654
No 293
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.025 Score=44.11 Aligned_cols=21 Identities=19% Similarity=0.148 Sum_probs=17.2
Q ss_pred EEEEecCCChhhHhhhHHHHH
Q 021505 113 GLYFSARWCIPCEKFMPKLLS 133 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~ 133 (311)
++.|+.+|||+|.+....|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLEN 36 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHH
Confidence 556788999999998877765
No 294
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.88 E-value=0.033 Score=43.92 Aligned_cols=61 Identities=21% Similarity=0.291 Sum_probs=40.1
Q ss_pred EEEEEec----CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 112 VGLYFSA----RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 112 vll~F~a----~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
|+||.++ +||++|.+....|.++ ++.+..|+++.+.+. ...
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~~~----------------gv~y~~vdI~~d~~~-------------------~~~ 81 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALAAC----------------GERFAYVDILQNPDI-------------------RAE 81 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHTT----------------CSCCEEEEGGGCHHH-------------------HHH
T ss_pred EEEEEEecCCCCCCccHHHHHHHHHHc----------------CCceEEEECCCCHHH-------------------HHH
Confidence 6666665 8999999877766431 455667777655321 345
Q ss_pred HHHhCCCCccceEEEECCCCcEE
Q 021505 188 LTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
+.+..|...+|.+| | +|+.+
T Consensus 82 L~~~~G~~tvP~Vf-I--~G~~i 101 (135)
T 2wci_A 82 LPKYANWPTFPQLW-V--DGELV 101 (135)
T ss_dssp HHHHHTCCSSCEEE-E--TTEEE
T ss_pred HHHHHCCCCcCEEE-E--CCEEE
Confidence 66667888999865 4 46655
No 295
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.77 E-value=0.043 Score=45.12 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=34.9
Q ss_pred CCCEEEEEEecCCChhhHhhhHHH-HHHHHHHHhhhhhcCCCCCCeEEEEEecCC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKL-LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 161 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l-~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~ 161 (311)
.+++++|.||...||+|..+.+.+ .++.+++.. .+.+..+.++.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~----------~v~~~~~~l~~ 60 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD----------IVAFTPFHLET 60 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT----------TCEEEEEECTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC----------ceEEEEEecCc
Confidence 457788889999999999999999 888877653 46777776553
No 296
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=94.55 E-value=0.006 Score=39.84 Aligned_cols=31 Identities=19% Similarity=0.737 Sum_probs=27.2
Q ss_pred CcccccccCCCcceeEeCCCC-CCCcccccccc
Q 021505 271 PFICCDCDEQGSGWAYQCLEC-GYEVHPKCVRA 302 (311)
Q Consensus 271 ~~~Cd~C~~~g~~w~~~C~~c-~~~~h~~c~~~ 302 (311)
.+.|+.|.+. .+-.|.|..| +|||...|-..
T Consensus 6 ~~~Cd~C~~~-ig~R~~C~~C~dyDLC~~C~~~ 37 (52)
T 1tot_A 6 VYTCNECKHH-VETRWHCTVCEDYDLCINCYNT 37 (52)
T ss_dssp CEEETTTTEE-ESSEEEESSSSSCEECHHHHHH
T ss_pred EEECCCCCCC-CcceEEcCCCCCchhHHHHHhC
Confidence 4789999998 4789999999 79999999766
No 297
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=94.41 E-value=0.097 Score=39.54 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=35.1
Q ss_pred CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccc
Q 021505 119 RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIP 198 (311)
Q Consensus 119 ~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P 198 (311)
+|||+|.+....|.+ . ++.+..++++.+.+. ...+.+..|...+|
T Consensus 29 ~~Cp~C~~ak~~L~~-------~---------gi~y~~~di~~d~~~-------------------~~~l~~~~g~~tvP 73 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------H---------NIQFSSFDIFSDEEV-------------------RQGLKAYSSWPTYP 73 (111)
T ss_dssp BSSHHHHHHHHHHHH-------T---------TCCCEEEEGGGCHHH-------------------HHHHHHHHTCCSSC
T ss_pred CcchhHHHHHHHHHH-------c---------CCCeEEEECcCCHHH-------------------HHHHHHHHCCCCCC
Confidence 999999988776653 1 344566666654321 23455555788899
Q ss_pred eEEEECCCCcEEE
Q 021505 199 CLVIIGPEGKTVT 211 (311)
Q Consensus 199 t~vlid~~G~iv~ 211 (311)
.+++ +|+.+.
T Consensus 74 ~ifi---~g~~iG 83 (111)
T 3zyw_A 74 QLYV---SGELIG 83 (111)
T ss_dssp EEEE---TTEEEE
T ss_pred EEEE---CCEEEe
Confidence 9764 466553
No 298
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.38 E-value=0.029 Score=44.56 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=27.1
Q ss_pred CCHHHHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 9 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 9 ~d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
-|.+.+..|+++|+|++|||++++. +|+.+.
T Consensus 75 VdvDe~~~lA~~ygV~sIPTlilFk----~G~~v~ 105 (140)
T 2qgv_A 75 ADLEQSEAIGDRFGAFRFPATLVFT----GGNYRG 105 (140)
T ss_dssp CCHHHHHHHHHHHTCCSSSEEEEEE----TTEEEE
T ss_pred EECCCCHHHHHHcCCccCCEEEEEE----CCEEEE
Confidence 4678889999999999999999998 787763
No 299
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=94.35 E-value=0.012 Score=43.72 Aligned_cols=31 Identities=29% Similarity=0.823 Sum_probs=27.2
Q ss_pred cccccccCC-CcceeEeCCCC-CCCcccccccc
Q 021505 272 FICCDCDEQ-GSGWAYQCLEC-GYEVHPKCVRA 302 (311)
Q Consensus 272 ~~Cd~C~~~-g~~w~~~C~~c-~~~~h~~c~~~ 302 (311)
..|++|+.. ..+-.|.|..| +|||+..|-..
T Consensus 32 v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~ 64 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCYKCTECIEYHLCQECFDS 64 (98)
T ss_dssp CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHT
T ss_pred CCCcCCCCCCcccCeEECCCCCCccHHHHHHcc
Confidence 899999985 56899999999 89999999544
No 300
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=94.23 E-value=0.018 Score=36.92 Aligned_cols=36 Identities=33% Similarity=0.658 Sum_probs=30.0
Q ss_pred CCCCcccccccCCCcc---eeEeCCCCCCCccccccccc
Q 021505 268 GGGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~ 303 (311)
-..+-+|+.|+++..+ ..|.|..|+|-.|.+|+...
T Consensus 8 ~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 8 YMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 46 (50)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhc
Confidence 3467899999997754 58999999999999998753
No 301
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=94.14 E-value=0.029 Score=39.17 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=31.0
Q ss_pred CCCCCcccccccCCCcceeEeCCCCCCCccccccccc
Q 021505 267 TGGGPFICCDCDEQGSGWAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 267 ~~~~~~~Cd~C~~~g~~w~~~C~~c~~~~h~~c~~~~ 303 (311)
.-..+-+|+.|+.+..--.|.|..|+|-.|.+|...+
T Consensus 31 ~~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~V 67 (72)
T 2fnf_X 31 LRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLI 67 (72)
T ss_dssp CCSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGGC
T ss_pred cCCCCcchhhhhHHHHhCcCccCCCCCeechhhhccC
Confidence 3457789999999874458999999999999998764
No 302
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=94.07 E-value=0.033 Score=36.04 Aligned_cols=35 Identities=26% Similarity=0.563 Sum_probs=29.8
Q ss_pred CCCcccccccCCCcceeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSGWAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-.|+.|++... ..|.|..|+|-.|.+|+....
T Consensus 12 ~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~v~ 46 (52)
T 1faq_A 12 LKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTKVP 46 (52)
T ss_dssp SSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSSSS
T ss_pred CCCcCCCCcccccc-cCCEeCCCCCeEChhHHhhCc
Confidence 45789999999765 689999999999999987643
No 303
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.05 E-value=0.15 Score=36.90 Aligned_cols=60 Identities=12% Similarity=0.018 Sum_probs=36.9
Q ss_pred EEEEecCCChhh------HhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 113 GLYFSARWCIPC------EKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 113 ll~F~a~wC~~C------~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
++.|+.++|+.| .+....|. .+ ++.+..+.++.+.+. ..
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~-------~~---------~i~~~~~di~~~~~~-------------------~~ 48 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD-------GK---------RIQYQLVDISQDNAL-------------------RD 48 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH-------HT---------TCCCEEEETTSCHHH-------------------HH
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH-------HC---------CCceEEEECCCCHHH-------------------HH
Confidence 445788999999 44433332 22 466777777765421 33
Q ss_pred HHHHhCC--CCccceEEEECCCCcEE
Q 021505 187 ELTKYFD--VQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 187 ~l~~~~~--v~~~Pt~vlid~~G~iv 210 (311)
++.+.+| ...+|.++ + +|+.+
T Consensus 49 ~l~~~~g~~~~~vP~if-i--~g~~i 71 (93)
T 1t1v_A 49 EMRTLAGNPKATPPQIV-N--GNHYC 71 (93)
T ss_dssp HHHHHTTCTTCCSCEEE-E--TTEEE
T ss_pred HHHHHhCCCCCCCCEEE-E--CCEEE
Confidence 5667777 67899865 4 45554
No 304
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.04 E-value=0.44 Score=41.88 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=43.4
Q ss_pred CEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCc----hhH
Q 021505 110 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD----PTI 185 (311)
Q Consensus 110 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~----d~~ 185 (311)
++.+..|+.++||+|......|.++..++ ++..+.+.++.-. ...|.. |+.. +..
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~------------~vi~l~~~v~~~d--------ylgw~D-~~a~~~~~~r~ 101 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG------------DVVGLSYHVDYWN--------YLGWTD-SLASKENTERQ 101 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT------------SSEEEEEECSTTC--------SSSSCC-TTCCHHHHHHH
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC------------CeeeEEEEEEEec--------cccccc-chhhhhhhHHH
Confidence 35777899999999999999888776542 3333444433210 000100 1111 123
Q ss_pred HHHHHhCCCCcc--ceEEE
Q 021505 186 KELTKYFDVQGI--PCLVI 202 (311)
Q Consensus 186 ~~l~~~~~v~~~--Pt~vl 202 (311)
..+.+.||...+ |.++|
T Consensus 102 ~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 102 YGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp HHHHHHTTCSCCCSSEEEE
T ss_pred HHHHHHhCCCcccCCEEEE
Confidence 458889999888 99655
No 305
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=93.99 E-value=0.052 Score=50.09 Aligned_cols=29 Identities=14% Similarity=0.363 Sum_probs=23.3
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|++.+..|+++|+|+++||++++. +|+.+
T Consensus 67 d~~~~~~l~~~~~v~~~Pt~~~f~----~G~~~ 95 (382)
T 2r2j_A 67 DCDQHSDIAQRYRISKYPTLKLFR----NGMMM 95 (382)
T ss_dssp ETTTCHHHHHHTTCCEESEEEEEE----TTEEE
T ss_pred ECCccHHHHHhcCCCcCCEEEEEe----CCcEe
Confidence 344567899999999999999887 57654
No 306
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.92 E-value=0.034 Score=39.91 Aligned_cols=36 Identities=31% Similarity=0.778 Sum_probs=30.5
Q ss_pred CCCCcccccccCCCcc---eeEeCCCCCCCccccccccc
Q 021505 268 GGGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~ 303 (311)
-..+-+|+.|+++..+ ..|.|..|+|-.|.+|+...
T Consensus 25 ~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 25 FGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp CSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTC
T ss_pred CCCCcChhhcChhhccccccccccCCcCCeeChhhhhhC
Confidence 3568899999997753 58999999999999998864
No 307
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.85 E-value=0.27 Score=36.87 Aligned_cols=39 Identities=13% Similarity=-0.044 Sum_probs=22.9
Q ss_pred EEEEecCCChhhHhhh--HHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 113 GLYFSARWCIPCEKFM--PKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~--p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
++.|+.++|+.|.... ....++.+ .+ ++.+..+.++.+.
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~---~~---------gi~y~~vdI~~~~ 50 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLE---AN---------KIEFEEVDITMSE 50 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HT---------TCCEEEEETTTCH
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHH---Hc---------CCCEEEEECCCCH
Confidence 4557789999999311 11222222 22 4667778887664
No 308
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=93.83 E-value=0.03 Score=38.30 Aligned_cols=35 Identities=31% Similarity=0.733 Sum_probs=29.9
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~ 303 (311)
..+-+|+.|+++..+ -.|.|..|+|-.|.+|+...
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 59 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLL 59 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHS
T ss_pred CCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhC
Confidence 467899999998754 47999999999999998763
No 309
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=93.69 E-value=0.039 Score=43.57 Aligned_cols=30 Identities=23% Similarity=0.370 Sum_probs=26.2
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
|.+.+..|+++|+|+++||++++. +|+.+.
T Consensus 74 dvDe~~~la~~ygV~siPTlilFk----dG~~v~ 103 (137)
T 2qsi_A 74 AAEAERGLMARFGVAVCPSLAVVQ----PERTLG 103 (137)
T ss_dssp CGGGHHHHHHHHTCCSSSEEEEEE----CCEEEE
T ss_pred ECCCCHHHHHHcCCccCCEEEEEE----CCEEEE
Confidence 556789999999999999999998 787763
No 310
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=93.57 E-value=0.17 Score=37.86 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccc
Q 021505 119 RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIP 198 (311)
Q Consensus 119 ~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P 198 (311)
+|||+|.+....|.+. ++.+..++++.+.+. ...+.+..|...+|
T Consensus 31 p~Cp~C~~ak~~L~~~----------------gi~~~~~dI~~~~~~-------------------~~~l~~~~g~~tvP 75 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL----------------NVPFEDVNILENEML-------------------RQGLKEYSNWPTFP 75 (109)
T ss_dssp BSSHHHHHHHHHHHHT----------------TCCCEEEEGGGCHHH-------------------HHHHHHHHTCSSSC
T ss_pred CCChhHHHHHHHHHHc----------------CCCcEEEECCCCHHH-------------------HHHHHHHHCCCCCC
Confidence 4999999887766542 344566666654311 33566666888999
Q ss_pred eEEEECCCCcEE
Q 021505 199 CLVIIGPEGKTV 210 (311)
Q Consensus 199 t~vlid~~G~iv 210 (311)
.++ | +|+.+
T Consensus 76 ~if-i--~g~~i 84 (109)
T 3ipz_A 76 QLY-I--GGEFF 84 (109)
T ss_dssp EEE-E--TTEEE
T ss_pred eEE-E--CCEEE
Confidence 764 4 46654
No 311
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=93.46 E-value=0.03 Score=38.18 Aligned_cols=36 Identities=33% Similarity=0.692 Sum_probs=30.0
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-+|+.|+++..+ ..|+|..|+|-.|.+|+....
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 56 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVA 56 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSC
T ss_pred CCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCC
Confidence 467899999997543 489999999999999987744
No 312
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=93.46 E-value=0.034 Score=37.87 Aligned_cols=36 Identities=31% Similarity=0.637 Sum_probs=30.1
Q ss_pred CCCCcccccccCCCcc---eeEeCCCCCCCccccccccc
Q 021505 268 GGGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~ 303 (311)
-..+-+|+.|+++..+ -.|.|..|+|-.|.+|+...
T Consensus 20 ~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 58 (65)
T 2enz_A 20 YKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKV 58 (65)
T ss_dssp CCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTS
T ss_pred CCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhC
Confidence 3467899999997754 47999999999999998764
No 313
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=93.42 E-value=0.17 Score=43.26 Aligned_cols=61 Identities=20% Similarity=0.210 Sum_probs=40.7
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
.++.|+.+||+.|++....|.+ + ++.+..+.++.+.. ..++.+.
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~-------~---------~i~~~~~~i~~~~~--------------------~~~l~~~ 214 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHD-------K---------GLSFEEIILGHDAT--------------------IVSVRAV 214 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHH-------H---------TCCCEEEETTTTCC--------------------HHHHHHH
T ss_pred eEEEEECCCChHHHHHHHHHHH-------c---------CCceEEEECCCchH--------------------HHHHHHH
Confidence 3556788999999988776653 1 24455566654320 2467888
Q ss_pred CCCCccceEEEECCCCcEEE
Q 021505 192 FDVQGIPCLVIIGPEGKTVT 211 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~G~iv~ 211 (311)
+|...+|.++ + +|+.+.
T Consensus 215 ~g~~~vP~~~-~--~g~~i~ 231 (241)
T 1nm3_A 215 SGRTTVPQVF-I--GGKHIG 231 (241)
T ss_dssp TCCSSSCEEE-E--TTEEEE
T ss_pred hCCCCcCEEE-E--CCEEEE
Confidence 9999999976 4 466543
No 314
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=93.41 E-value=0.02 Score=38.30 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=30.9
Q ss_pred CCCCCcccccccCCCcceeEeCCCCCCCccccccccc
Q 021505 267 TGGGPFICCDCDEQGSGWAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 267 ~~~~~~~Cd~C~~~g~~w~~~C~~c~~~~h~~c~~~~ 303 (311)
.-..+-+|+.|+.+..-..|.|..|+|-.|.+|...+
T Consensus 18 ~~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~v 54 (59)
T 1rfh_A 18 LRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLI 54 (59)
T ss_dssp CSSCCEECTTTCSEECSCCEECTTTSCEECHHHHTTC
T ss_pred ccCCCeEchhcchhhhhCccEeCCCCCeEehhhhhhC
Confidence 3456789999999775568999999999999998764
No 315
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=92.99 E-value=0.029 Score=40.20 Aligned_cols=32 Identities=22% Similarity=0.655 Sum_probs=27.6
Q ss_pred CcccccccCC-CcceeEeCCCC-C---CCcccccccc
Q 021505 271 PFICCDCDEQ-GSGWAYQCLEC-G---YEVHPKCVRA 302 (311)
Q Consensus 271 ~~~Cd~C~~~-g~~w~~~C~~c-~---~~~h~~c~~~ 302 (311)
.+.||+|++. ..+-.|.|..| + |||+..|-..
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhC
Confidence 5689999974 56899999999 6 9999999765
No 316
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=91.79 E-value=0.022 Score=44.09 Aligned_cols=46 Identities=28% Similarity=0.604 Sum_probs=35.3
Q ss_pred CccccccCCHHHHHHHHhhcccCCCCeeEEecCCCCCCceeechhhHHHh
Q 021505 2 PWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIY 51 (311)
Q Consensus 2 ~w~a~p~~d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~~~~~~v~ 51 (311)
+|..+|+.+ +...++++.|+|.++|+++++++ +|+++...+...++
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 86 DWLAIPYRS-GPASNVTAKYGITGIPALVIVKK---DGTLISMNGRGEVQ 131 (143)
Confidence 577777744 35578999999999999999997 89887666544443
No 317
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.58 E-value=0.063 Score=38.68 Aligned_cols=36 Identities=33% Similarity=0.709 Sum_probs=30.3
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-+|+.|+.+..+ -.|.|..|+|-.|.+|+....
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVP 64 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSC
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcC
Confidence 467899999997754 479999999999999987643
No 318
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.45 E-value=0.046 Score=38.30 Aligned_cols=36 Identities=22% Similarity=0.532 Sum_probs=30.6
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-+|+.|.++..+ -.|.|..|+|-.|.+|+..+.
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGS
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhhCC
Confidence 467899999998765 479999999999999998753
No 319
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.36 E-value=0.45 Score=36.34 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=34.3
Q ss_pred CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeE---EEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCC
Q 021505 119 RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE---VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ 195 (311)
Q Consensus 119 ~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~---vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~ 195 (311)
+|||+|.+....|.+. ++. +..++++.+.+. ...+.+..|..
T Consensus 29 p~Cp~C~~ak~lL~~~----------------gv~~~~~~~~dv~~~~~~-------------------~~~l~~~sg~~ 73 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ----------------GVDPAKFAAYNVLEDPEL-------------------REGIKEFSEWP 73 (121)
T ss_dssp BCTTHHHHHHHHHHHH----------------TBCGGGEEEEECTTCHHH-------------------HHHHHHHHTCC
T ss_pred CCCccHHHHHHHHHHc----------------CCCcceEEEEEecCCHHH-------------------HHHHHHHhCCC
Confidence 4999999888776542 233 555666654321 33555666888
Q ss_pred ccceEEEECCCCcEE
Q 021505 196 GIPCLVIIGPEGKTV 210 (311)
Q Consensus 196 ~~Pt~vlid~~G~iv 210 (311)
.+|.++| +|+.+
T Consensus 74 tvP~vfI---~g~~i 85 (121)
T 3gx8_A 74 TIPQLYV---NKEFI 85 (121)
T ss_dssp SSCEEEE---TTEEE
T ss_pred CCCeEEE---CCEEE
Confidence 8999764 46655
No 320
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=92.27 E-value=2 Score=36.79 Aligned_cols=53 Identities=13% Similarity=0.235 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCC----CccceEE
Q 021505 126 KFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDV----QGIPCLV 201 (311)
Q Consensus 126 ~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v----~~~Pt~v 201 (311)
.....+.+++++|+++ +..+.++.++.+. ...+.+.||+ ...|.++
T Consensus 150 ~~~~~~~~vA~~~~~k-------~~~~~F~~~d~~~-----------------------~~~~~~~fgl~~~~~~~P~v~ 199 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDA-------GHKLNFAVASRKT-----------------------FSHELSDFGLESTAGEIPVVA 199 (252)
T ss_dssp HHHHHHHHHHHHHHHT-------TCCCEEEEEETTT-----------------------THHHHGGGTCCCCSCSSCEEE
T ss_pred HHHHHHHHHHHHcccc-------CceEEEEEEchHH-----------------------HHHHHHHcCCCCccCCCCEEE
Confidence 3566778888888864 3357778877653 2357788999 3689999
Q ss_pred EECCCCc
Q 021505 202 IIGPEGK 208 (311)
Q Consensus 202 lid~~G~ 208 (311)
|+|.+++
T Consensus 200 i~~~~~~ 206 (252)
T 2h8l_A 200 IRTAKGE 206 (252)
T ss_dssp EECTTSC
T ss_pred EEeCcCc
Confidence 9987665
No 321
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=91.98 E-value=0.061 Score=37.98 Aligned_cols=37 Identities=35% Similarity=0.670 Sum_probs=30.6
Q ss_pred CCCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 268 GGGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
-..+-+|+.|+++..+ ..|.|..|+|-.|.+|.....
T Consensus 31 f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 70 (77)
T 2enn_A 31 FPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVI 70 (77)
T ss_dssp CSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCC
T ss_pred CCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCc
Confidence 3568899999996643 489999999999999987744
No 322
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=91.70 E-value=0.37 Score=36.74 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=33.5
Q ss_pred CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCe-EEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCcc
Q 021505 119 RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDF-EVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGI 197 (311)
Q Consensus 119 ~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~ 197 (311)
+|||+|.+....|.+. ++ .+..+.++.+.+. ...+.+..|...+
T Consensus 33 p~Cp~C~~ak~lL~~~----------------gv~~~~~vdV~~d~~~-------------------~~~l~~~tg~~tv 77 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH----------------GVRDYAAYNVLDDPEL-------------------RQGIKDYSNWPTI 77 (118)
T ss_dssp BSSHHHHHHHHHHHHT----------------TCCCCEEEESSSCHHH-------------------HHHHHHHHTCCSS
T ss_pred CccHHHHHHHHHHHHc----------------CCCCCEEEEcCCCHHH-------------------HHHHHHHhCCCCc
Confidence 4999999877766531 34 2556666655421 2345555578889
Q ss_pred ceEEEECCCCcEE
Q 021505 198 PCLVIIGPEGKTV 210 (311)
Q Consensus 198 Pt~vlid~~G~iv 210 (311)
|.++| +|+.+
T Consensus 78 P~vfI---~g~~I 87 (118)
T 2wem_A 78 PQVYL---NGEFV 87 (118)
T ss_dssp CEEEE---TTEEE
T ss_pred CeEEE---CCEEE
Confidence 99754 45655
No 323
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=91.61 E-value=0.37 Score=40.19 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=36.8
Q ss_pred ccccCCCEEEEEEecCCChhhHhhhHHH-HHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 104 VSSLVGKTVGLYFSARWCIPCEKFMPKL-LSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 104 l~~~~gk~vll~F~a~wC~~C~~~~p~l-~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
+..-.++++|+.|+...||+|.++.+.+ ..+.++|.+ ..++.++...+.
T Consensus 24 ~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~--------~g~v~~~~~~~p 73 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFID--------KGDVKFSFVNVM 73 (202)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTT--------TTSEEEEEEECC
T ss_pred ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhcc--------CCeEEEEEEecC
Confidence 4445678999999999999999999886 455556653 136888888764
No 324
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.17 E-value=0.51 Score=36.26 Aligned_cols=56 Identities=16% Similarity=0.193 Sum_probs=41.6
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.++++|-|+++||.+| .+.+.++++.+ + ++.+..++ +.++
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~----------d~~F~~t~--------------------------~~~v 78 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-P----------GVSFGIST--------------------------DSEV 78 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-T----------TSEEEEEC--------------------------CHHH
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-C----------CceEEEEC--------------------------hHHH
Confidence 4789999999999988 45566777766 3 45554442 2368
Q ss_pred HHhCCCCccceEEEECC
Q 021505 189 TKYFDVQGIPCLVIIGP 205 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~ 205 (311)
.+.|++. .|+++|+.+
T Consensus 79 ~~~~~v~-~~~vvlfkk 94 (124)
T 2l4c_A 79 LTHYNIT-GNTICLFRL 94 (124)
T ss_dssp HHHTTCC-SSCEEEEET
T ss_pred HHHcCCC-CCeEEEEEc
Confidence 8999998 899999965
No 325
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=90.93 E-value=0.076 Score=39.52 Aligned_cols=29 Identities=10% Similarity=0.339 Sum_probs=23.9
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+.+..|+++|+|+++||++++. +|+.+
T Consensus 58 d~d~~~~l~~~~~V~~~PT~~~~~----~G~~v 86 (105)
T 3zzx_A 58 DVDECEDIAQDNQIACMPTFLFMK----NGQKL 86 (105)
T ss_dssp ETTTCHHHHHHTTCCBSSEEEEEE----TTEEE
T ss_pred ecccCHHHHHHcCCCeecEEEEEE----CCEEE
Confidence 344568899999999999999986 68765
No 326
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=90.75 E-value=0.7 Score=38.71 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=38.4
Q ss_pred eeccccCCCEEEEEEecCCChhhHhhhHHHHHHHH-HHHhhhhhcCCCCCCeEEEEEecC
Q 021505 102 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQ-KIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 102 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
..+..-.++++|+.|.-.-||+|+++.+.+....+ +|-+ ..++.+++..+-
T Consensus 8 ~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~--------~g~v~~v~r~~p 59 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQ--------PGKGAIEVRNFV 59 (205)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTSEEEEEEECC
T ss_pred ceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhcc--------CCeEEEEEEeCC
Confidence 44445567899999999999999999988866555 6633 246888888763
No 327
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=90.07 E-value=0.45 Score=39.12 Aligned_cols=43 Identities=16% Similarity=0.043 Sum_probs=34.8
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
.++++|+.|.-..||+|.++.+.+.++.+++. ..++.+++..+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~---------~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAG---------EDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHC---------TTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhC---------CCCEEEEEEEc
Confidence 46789999999999999999999988877762 12588888765
No 328
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=89.91 E-value=0.42 Score=38.88 Aligned_cols=45 Identities=20% Similarity=0.332 Sum_probs=33.6
Q ss_pred CCCEEEEEEecCCChhhHhhhHHH-HHHHHHHHhhhhhcCCCCCCeEEEEEecC
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKL-LSIYQKIKQNLVEKGDALEDFEVVFVSTD 160 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l-~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d 160 (311)
.++++|+.|+-.-||+|..+.+.+ ..+.++|.+. .++.|+...+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~--------~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDN--------HKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT--------TSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccC--------CeEEEEEEecC
Confidence 457889999999999999999998 4566677532 25777776553
No 329
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=89.62 E-value=0.27 Score=38.66 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=23.3
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....|+++|+|+++||++++. +|+.+
T Consensus 76 d~d~~~~la~~~~V~~iPT~~~fk----~G~~v 104 (142)
T 2es7_A 76 DLEQSEAIGDRFNVRRFPATLVFT----DGKLR 104 (142)
T ss_dssp CHHHHHHHHHTTTCCSSSEEEEES----CC---
T ss_pred ECCCCHHHHHhcCCCcCCeEEEEe----CCEEE
Confidence 667788999999999999999995 67654
No 330
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=89.31 E-value=0.17 Score=34.03 Aligned_cols=34 Identities=26% Similarity=0.633 Sum_probs=27.8
Q ss_pred CCCcccccccCCC-cc-eeEeCCCCCCCcccccccc
Q 021505 269 GGPFICCDCDEQG-SG-WAYQCLECGYEVHPKCVRA 302 (311)
Q Consensus 269 ~~~~~Cd~C~~~g-~~-w~~~C~~c~~~~h~~c~~~ 302 (311)
.++-.|+.|++.. .+ ++|.|..|++-.|+.|-..
T Consensus 17 ~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 17 IKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CSCEECTTTCCEECTTCEEEEESSSSCEECGGGGGG
T ss_pred cCCcccccccCEEEEeeEeeECCCCCCeEchhHhhc
Confidence 3567899998744 43 7999999999999999654
No 331
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=88.95 E-value=0.23 Score=39.27 Aligned_cols=29 Identities=17% Similarity=0.475 Sum_probs=25.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+.+..++++|+|.++|+++++++ +|+++.
T Consensus 103 ~~~~~l~~~~~v~~~Pt~~~~d~---~G~~~~ 131 (154)
T 2ju5_A 103 QKNQELKAQYKVTGFPELVFIDA---EGKQLA 131 (154)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECT---TCCEEE
T ss_pred hhHHHHHHHcCCCCCCEEEEEcC---CCCEEE
Confidence 45678999999999999999987 888764
No 332
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=88.88 E-value=0.54 Score=43.59 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=31.2
Q ss_pred CCCCCcccccccCCCcce---eEeCCCCCCCcccccccccc
Q 021505 267 TGGGPFICCDCDEQGSGW---AYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 267 ~~~~~~~Cd~C~~~g~~w---~~~C~~c~~~~h~~c~~~~~ 304 (311)
....+-.|.+|+....|. .|.|..|++-+|.+|.....
T Consensus 353 ~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~ 393 (406)
T 2vrw_B 353 SFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP 393 (406)
T ss_dssp CCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC
T ss_pred cCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC
Confidence 456788999999976543 68899999999999987643
No 333
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=87.49 E-value=2.7 Score=32.13 Aligned_cols=42 Identities=7% Similarity=-0.085 Sum_probs=23.6
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCH
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 163 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~ 163 (311)
|+..|.++.|++|.....- ..+..-+..+ ++.+--+.++.+.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c-~~aK~lL~~k---------gV~feEidI~~d~ 42 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQ-QDVLGFLEAN---------KIGFEEKDIAANE 42 (121)
T ss_dssp CEEEEECTTCSCHHHHHHH-HHHHHHHHHT---------TCCEEEEECTTCH
T ss_pred CEEEEecCCCCCccchHHH-HHHHHHHHHC---------CCceEEEECCCCH
Confidence 3555678999999532221 1111223333 6777778777665
No 334
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=85.73 E-value=0.19 Score=36.05 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=28.6
Q ss_pred CCCCcccccccCCCc--ce---eEeCCCCCCCcccccccc
Q 021505 268 GGGPFICCDCDEQGS--GW---AYQCLECGYEVHPKCVRA 302 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~--~w---~~~C~~c~~~~h~~c~~~ 302 (311)
-..+-.|+.|+...- +. .|.|..|+|-.|.+|..+
T Consensus 32 ~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k 71 (84)
T 2row_A 32 YHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDK 71 (84)
T ss_dssp CSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHH
T ss_pred CCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCC
Confidence 445778999998543 33 899999999999999984
No 335
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=85.42 E-value=0.34 Score=37.20 Aligned_cols=29 Identities=24% Similarity=0.509 Sum_probs=24.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+....++++|+|.++|++++++. +|+++.
T Consensus 92 ~~~~~~~~~~~v~~~Pt~~~~~~---~g~~~~ 120 (141)
T 3hxs_A 92 DKEPELARDFGIQSIPTIWFVPM---KGEPQV 120 (141)
T ss_dssp TTCHHHHHHTTCCSSSEEEEECS---SSCCEE
T ss_pred CCCHHHHHHcCCCCcCEEEEEeC---CCCEEE
Confidence 44678999999999999999986 777653
No 336
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=85.23 E-value=0.71 Score=35.28 Aligned_cols=28 Identities=14% Similarity=0.414 Sum_probs=24.5
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|++++++. +|+++
T Consensus 78 ~~~~~l~~~~~v~~~Pt~~~~d~---~G~~v 105 (134)
T 2fwh_A 78 AQDVALLKHLNVLGLPTILFFDG---QGQEH 105 (134)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECT---TSCBC
T ss_pred chHHHHHHHcCCCCCCEEEEECC---CCCEe
Confidence 56788999999999999999986 88774
No 337
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=84.97 E-value=0.52 Score=35.39 Aligned_cols=29 Identities=24% Similarity=0.316 Sum_probs=24.8
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+.+..++++|+|.++|+++++++ +|+.+
T Consensus 68 ~d~~~~~~~~~~v~~~Pt~~~~~~---~G~~~ 96 (126)
T 2l57_A 68 EEKNIDLAYKYDANIVPTTVFLDK---EGNKF 96 (126)
T ss_dssp SSHHHHHHHHTTCCSSSEEEEECT---TCCEE
T ss_pred CCchHHHHHHcCCcceeEEEEECC---CCCEE
Confidence 345688999999999999999997 78765
No 338
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=84.48 E-value=1.2 Score=40.75 Aligned_cols=22 Identities=23% Similarity=0.398 Sum_probs=15.5
Q ss_pred HHHHHhCCCCccceEEEECCCCcEE
Q 021505 186 KELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 186 ~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
..+.+..|...+|.++ | +|+.+
T Consensus 308 ~~L~~~tG~~TVPqVF-I--~Gk~I 329 (362)
T 2jad_A 308 AALYEINGQRTVPNIY-I--NGKHI 329 (362)
T ss_dssp HHHHHHHCCCSSCEEE-E--TTEEE
T ss_pred HHHHHHHCCCCcCEEE-E--CCEEE
Confidence 3566777999999875 4 46654
No 339
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=84.38 E-value=0.42 Score=36.10 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=21.1
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecC
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
|.+.+..|+++|+|+++|+++++..
T Consensus 77 d~~~~~~l~~~~~v~~~Pt~~~~~~ 101 (127)
T 3h79_A 77 DGEKYPDVIERMRVSGFPTMRYYTR 101 (127)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEECS
T ss_pred EccccHhHHHhcCCccCCEEEEEeC
Confidence 3445678999999999999999984
No 340
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=83.36 E-value=0.47 Score=36.37 Aligned_cols=28 Identities=21% Similarity=0.468 Sum_probs=23.5
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|++++++. +|+.+
T Consensus 79 ~~~~~l~~~~~v~~~Pt~~~~~~---~G~~~ 106 (136)
T 2l5l_A 79 EKEQELAGAFGIRSIPSILFIPM---EGKPE 106 (136)
T ss_dssp TTCHHHHHHTTCCSSCEEEEECS---SSCCE
T ss_pred CCCHHHHHHcCCCCCCEEEEECC---CCcEE
Confidence 34578999999999999999975 78765
No 341
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=83.04 E-value=0.85 Score=34.25 Aligned_cols=27 Identities=15% Similarity=0.442 Sum_probs=23.5
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|++++++. +|+++
T Consensus 74 ~~~~~~~~~~v~~~Pt~~~~d~---~G~~~ 100 (130)
T 2kuc_A 74 EGVELRKKYGVHAYPTLLFINS---SGEVV 100 (130)
T ss_dssp THHHHHHHTTCCSSCEEEEECT---TSCEE
T ss_pred chHHHHHHcCCCCCCEEEEECC---CCcEE
Confidence 4678999999999999999986 78775
No 342
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=82.90 E-value=1.4 Score=42.91 Aligned_cols=35 Identities=23% Similarity=0.482 Sum_probs=29.5
Q ss_pred CCCcccccccCCCc---ceeEeCCCCCCCccccccccc
Q 021505 269 GGPFICCDCDEQGS---GWAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~---~w~~~C~~c~~~~h~~c~~~~ 303 (311)
..+-.|.+|+.... ...|.|..|++-+|.+|....
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC
Confidence 56789999999743 347999999999999999864
No 343
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=82.65 E-value=4 Score=32.01 Aligned_cols=51 Identities=12% Similarity=0.322 Sum_probs=34.6
Q ss_pred hHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCc--cceEE
Q 021505 124 CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG--IPCLV 201 (311)
Q Consensus 124 C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~--~Pt~v 201 (311)
-....+.+.+++++|+++ +.++.|+.+.+. ...+.+.||+.. +|++.
T Consensus 47 ~~~~~~~~~~vAk~fkgk----------i~Fv~vd~~~~~---------------------~~~~l~~fGl~~~~~P~v~ 95 (147)
T 3bj5_A 47 YDGKLSNFKTAAESFKGK----------ILFAFIDSDHTD---------------------NQRILEFFGLKKEECPAVR 95 (147)
T ss_dssp HHHHHHHHHHHHHTTTTT----------CEEEEECTTCGG---------------------GHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCc----------eEEEEEecchHh---------------------HHHHHHHcCCCcccCCEEE
Confidence 344667778888887754 455555443233 446788999985 89999
Q ss_pred EECC
Q 021505 202 IIGP 205 (311)
Q Consensus 202 lid~ 205 (311)
|++.
T Consensus 96 i~~~ 99 (147)
T 3bj5_A 96 LITL 99 (147)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9975
No 344
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=82.49 E-value=0.64 Score=34.55 Aligned_cols=27 Identities=7% Similarity=0.343 Sum_probs=22.6
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|+++++. +|+.+
T Consensus 71 d~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 97 (116)
T 3qfa_C 71 DDCQDVASECEVKSMPTFQFFK----KGQKV 97 (116)
T ss_dssp TTTHHHHHHTTCCSSSEEEEES----SSSEE
T ss_pred CCCHHHHHHcCCccccEEEEEe----CCeEE
Confidence 4467899999999999999985 67664
No 345
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=82.26 E-value=1.4 Score=37.04 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=39.5
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.++++|-|+++|| ....+.+.++++.+. ++.+..++ +.++
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~-----------~~~F~~t~--------------------------~~~v 66 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP-----------GVSFGIST--------------------------DSEV 66 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT-----------TSEEEEEC--------------------------CHHH
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC-----------CceEEEEC--------------------------CHHH
Confidence 4789999999985 566777777776652 34443321 3467
Q ss_pred HHhCCCCccceEEEECC
Q 021505 189 TKYFDVQGIPCLVIIGP 205 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~ 205 (311)
++.|++.+ |+++++.+
T Consensus 67 ~~~~~v~~-p~i~lfk~ 82 (227)
T 4f9z_D 67 LTHYNITG-NTICLFRL 82 (227)
T ss_dssp HHHTTCCS-SEEEEEET
T ss_pred HHHcCCCC-CeEEEEEe
Confidence 88899988 99998854
No 346
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=81.74 E-value=0.55 Score=34.45 Aligned_cols=27 Identities=11% Similarity=0.382 Sum_probs=22.5
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 64 ~~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 90 (109)
T 3f3q_A 64 DELGDVAQKNEVSAMPTLLLFK----NGKEV 90 (109)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCccCEEEEEE----CCEEE
Confidence 4457899999999999999997 57664
No 347
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=81.28 E-value=0.98 Score=34.53 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=25.6
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
|.+....+.+.|+|.++|+++++++ +|+++..
T Consensus 98 d~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 129 (142)
T 3eur_A 98 DKELVIKNKNLYDLRAIPTLYLLDK---NKTVLLK 129 (142)
T ss_dssp CTTCHHHHTTCSCCTTCSEEEEECT---TCBEEEE
T ss_pred CccchhhhhhhcCCCcCCeEEEECC---CCcEEec
Confidence 3333456899999999999999997 8988754
No 348
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=81.26 E-value=0.78 Score=34.72 Aligned_cols=29 Identities=21% Similarity=0.489 Sum_probs=24.9
Q ss_pred HHHHHHHhhccc---CCCCeeEEecCCCCCCceee
Q 021505 12 ETKKALNRKFDI---EGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 12 ~~~~~l~~~~~i---~~~P~l~~~~~~~~~g~~~~ 43 (311)
+....|+++|+| .++|++++++. +|+++.
T Consensus 75 ~~~~~l~~~~~v~~~~~~Pt~~~~d~---~G~~~~ 106 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQDGIPAVVVVNS---DGKVRY 106 (133)
T ss_dssp TSSHHHHHHTTCGGGGCSSEEEEECT---TSCEEE
T ss_pred cchHHHHHHhCCccCCccceEEEECC---CCCEEE
Confidence 456789999999 99999999986 888764
No 349
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=81.23 E-value=1 Score=33.33 Aligned_cols=28 Identities=18% Similarity=0.420 Sum_probs=22.7
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+....++++|+|.++|+++++. +|+.+
T Consensus 73 ~~~~~~~~~~~~i~~~Pt~~~~~----~G~~~ 100 (118)
T 1zma_A 73 LNDLQAFRSRYGIPTVPGFVHIT----DGQIN 100 (118)
T ss_dssp HHHHHHHHHHHTCCSSCEEEEEE----TTEEE
T ss_pred HHHHHHHHHHcCCCCCCeEEEEE----CCEEE
Confidence 34557899999999999999986 67654
No 350
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=80.95 E-value=0.8 Score=33.59 Aligned_cols=29 Identities=24% Similarity=0.508 Sum_probs=23.6
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....++++|+|.++|+++++. +|+.+
T Consensus 57 d~~~~~~l~~~~~v~~~Pt~~~~~----~G~~v 85 (110)
T 2l6c_A 57 DSEARPELMKELGFERVPTLVFIR----DGKVA 85 (110)
T ss_dssp EGGGCHHHHHHTTCCSSCEEEEEE----SSSEE
T ss_pred cCcCCHHHHHHcCCcccCEEEEEE----CCEEE
Confidence 344567899999999999999984 67765
No 351
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=80.84 E-value=0.64 Score=33.70 Aligned_cols=27 Identities=7% Similarity=0.115 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|+++++. +|+.+
T Consensus 61 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 87 (107)
T 1gh2_A 61 HQCQGTAATNNISATPTFQFFR----NKVRI 87 (107)
T ss_dssp TTSHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred ccCHHHHHhcCCCcccEEEEEE----CCeEE
Confidence 3457899999999999999985 67654
No 352
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=80.45 E-value=1 Score=44.75 Aligned_cols=36 Identities=31% Similarity=0.636 Sum_probs=29.4
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-.|++|+++-.+ --|+|..|++-+|.+|...+.
T Consensus 111 ~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~ 149 (674)
T 3pfq_A 111 SSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVP 149 (674)
T ss_dssp SSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSC
T ss_pred CCCCCCCccccccchhhcCccccccCCcchhhhhhhccC
Confidence 456699999998443 589999999999999987643
No 353
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=80.41 E-value=0.65 Score=33.60 Aligned_cols=29 Identities=17% Similarity=0.502 Sum_probs=22.9
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....++++|+|.++|+++++. +|+.+
T Consensus 63 d~~~~~~l~~~~~v~~~Pt~~~~~----~g~~~ 91 (111)
T 3uvt_A 63 DCTAERNICSKYSVRGYPTLLLFR----GGKKV 91 (111)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred eccccHhHHHhcCCCcccEEEEEe----CCcEE
Confidence 334567899999999999999986 56654
No 354
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=80.34 E-value=0.79 Score=34.60 Aligned_cols=29 Identities=28% Similarity=0.699 Sum_probs=23.6
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....++++|+|.++|+++++. +|+.+
T Consensus 81 d~d~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 109 (128)
T 3ul3_B 81 DLDKNESLARKFSVKSLPTIILLK----NKTML 109 (128)
T ss_dssp EGGGCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred ECCCCHHHHHHcCCCCcCEEEEEE----CCEEE
Confidence 345567899999999999999995 67665
No 355
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=80.19 E-value=0.66 Score=33.62 Aligned_cols=27 Identities=22% Similarity=0.596 Sum_probs=22.4
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..|+++|+|.++|+++++. +|+.+
T Consensus 63 ~~~~~l~~~~~v~~~Pt~~~~~----~g~~~ 89 (111)
T 3gnj_A 63 EEEKTLFQRFSLKGVPQILYFK----DGEYK 89 (111)
T ss_dssp TTCHHHHHHTTCCSSCEEEEEE----TTEEE
T ss_pred CcChhHHHhcCCCcCCEEEEEE----CCEEE
Confidence 3457899999999999999996 67654
No 356
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=79.93 E-value=0.66 Score=33.23 Aligned_cols=27 Identities=19% Similarity=0.508 Sum_probs=22.3
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 60 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 86 (106)
T 3die_A 60 DENPSTAAKYEVMSIPTLIVFK----DGQPV 86 (106)
T ss_dssp TTCHHHHHHTTCCSBSEEEEEE----TTEEE
T ss_pred CcCHHHHHhCCCcccCEEEEEe----CCeEE
Confidence 3457899999999999999986 67654
No 357
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=79.46 E-value=14 Score=27.25 Aligned_cols=64 Identities=16% Similarity=0.266 Sum_probs=47.8
Q ss_pred EEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHh
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 191 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 191 (311)
+.+.|.|...+.+...+..+.++.+++... ..+++=.|.+-. ..++++.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~--------~~y~LeVIDv~e-----------------------qPeLAE~ 61 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEAT--------VPISLQVINVAD-----------------------QPQLVEY 61 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCS--------SCEEEEEEETTT-----------------------CHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccC--------CceEEEEeeccc-----------------------CHHHHhH
Confidence 444556667788999999999988877621 256666666655 4489999
Q ss_pred CCCCccceEEEECCC
Q 021505 192 FDVQGIPCLVIIGPE 206 (311)
Q Consensus 192 ~~v~~~Pt~vlid~~ 206 (311)
++|.++||++=+-|.
T Consensus 62 ~~IvATPTLIK~~P~ 76 (105)
T 1t4y_A 62 YRLVVTPALVKIGPG 76 (105)
T ss_dssp TTCCSSSEEEEEESS
T ss_pred cCeeeccHhhccCCC
Confidence 999999999988663
No 358
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=79.22 E-value=1 Score=34.51 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=24.3
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
...+.+.|+|.++|+.+++++ +|+++..
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 129 (143)
T 4fo5_A 102 ESELYKKYDLRKGFKNFLIND---EGVIIAA 129 (143)
T ss_dssp GSHHHHHTTGGGCCCEEEECT---TSBEEEE
T ss_pred chHHHHHcCCCCCCcEEEECC---CCEEEEc
Confidence 367999999999999999997 8988754
No 359
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=79.20 E-value=1.4 Score=33.72 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=23.1
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++||++++. +|+.+
T Consensus 79 d~~~~l~~~~~v~~~Pt~~~~~----~G~~v 105 (135)
T 3emx_A 79 SAARLEMNKAGVEGTPTLVFYK----EGRIV 105 (135)
T ss_dssp HHHHHHHHHHTCCSSSEEEEEE----TTEEE
T ss_pred hhhHHHHHHcCCceeCeEEEEc----CCEEE
Confidence 5678899999999999999988 67664
No 360
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=79.00 E-value=0.77 Score=33.50 Aligned_cols=27 Identities=15% Similarity=0.538 Sum_probs=22.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 63 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 89 (112)
T 3d6i_A 63 DENSEISELFEISAVPYFIIIH----KGTIL 89 (112)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred ccCHHHHHHcCCCcccEEEEEE----CCEEE
Confidence 3457899999999999999885 67765
No 361
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=78.97 E-value=0.37 Score=34.98 Aligned_cols=26 Identities=4% Similarity=0.211 Sum_probs=13.6
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 59 ~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 84 (105)
T 4euy_A 59 DMQEIAGRYAVFTGPTVLLFY----NGKEI 84 (105)
T ss_dssp CC---------CCCCEEEEEE----TTEEE
T ss_pred CCHHHHHhcCCCCCCEEEEEe----CCeEE
Confidence 456899999999999999996 67665
No 362
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=78.92 E-value=2 Score=33.17 Aligned_cols=28 Identities=18% Similarity=0.439 Sum_probs=24.5
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
...+.+.|+|.++|+++++++ +|+++..
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 125 (152)
T 2lrn_A 98 VKDVLESYCIVGFPHIILVDP---EGKIVAK 125 (152)
T ss_dssp HHHHHHHTTCCSSCEEEEECT---TSEEEEE
T ss_pred hHHHHHHhCCCcCCeEEEECC---CCeEEEe
Confidence 578999999999999999997 8988644
No 363
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=78.77 E-value=0.77 Score=32.99 Aligned_cols=27 Identities=11% Similarity=0.396 Sum_probs=22.4
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 62 ~~~~~~~~~~~i~~~Pt~~~~~----~g~~~ 88 (109)
T 3tco_A 62 DENQKIADKYSVLNIPTTLIFV----NGQLV 88 (109)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred ccCHHHHHhcCcccCCEEEEEc----CCcEE
Confidence 4457899999999999999994 67664
No 364
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=78.40 E-value=0.8 Score=34.41 Aligned_cols=23 Identities=13% Similarity=0.596 Sum_probs=20.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecC
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
+.+..|+++|+|.++|++++++.
T Consensus 76 ~~~~~l~~~~~v~~~Pt~~~~~~ 98 (130)
T 2dml_A 76 DKHQSLGGQYGVQGFPTIKIFGA 98 (130)
T ss_dssp TTCHHHHHHHTCCSSSEEEEESS
T ss_pred CCCHHHHHHcCCCccCEEEEEeC
Confidence 44578999999999999999985
No 365
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=78.25 E-value=0.98 Score=34.40 Aligned_cols=29 Identities=34% Similarity=0.631 Sum_probs=23.1
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+.+..++++|+|.++|+++++. +|++.
T Consensus 76 d~~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 104 (140)
T 2dj1_A 76 DATSASMLASKFDVSGYPTIKILK----KGQAV 104 (140)
T ss_dssp CTTTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred eCcccHHHHHHCCCCccCeEEEEE----CCcEE
Confidence 444567899999999999999995 67643
No 366
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.11 E-value=0.82 Score=34.25 Aligned_cols=27 Identities=15% Similarity=0.332 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|++.
T Consensus 64 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 90 (126)
T 1x5e_A 64 TEQPGLSGRFIINALPTIYHCK----DGEFR 90 (126)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred cCCHHHHHHcCCcccCEEEEEe----CCeEE
Confidence 3457799999999999999994 67753
No 367
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=77.97 E-value=0.8 Score=32.84 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=21.7
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 59 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 84 (105)
T 1nsw_A 59 ENPETTSQFGIMSIPTLILFK----GGRPV 84 (105)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCccccEEEEEe----CCeEE
Confidence 457899999999999999994 77764
No 368
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=77.87 E-value=0.41 Score=36.25 Aligned_cols=26 Identities=23% Similarity=0.539 Sum_probs=21.7
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+.+++++|+|+++|+++++ . +|+.+
T Consensus 77 ~~~~l~~~~~v~~~Pt~~~~-~---~G~~~ 102 (123)
T 1oaz_A 77 QNPGTAPKYGIRGIPTLLLF-K---NGEVA 102 (123)
T ss_dssp SCTTTGGGGTCCBSSEEEEE-E---SSSEE
T ss_pred CCHHHHHHcCCCccCEEEEE-E---CCEEE
Confidence 34679999999999999999 4 78765
No 369
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=77.81 E-value=0.81 Score=32.75 Aligned_cols=27 Identities=7% Similarity=0.319 Sum_probs=22.3
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 60 ~~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 86 (105)
T 3m9j_A 60 DDCQDVASESEVKSMPTFQFFK----KGQKV 86 (105)
T ss_dssp TTCHHHHHHTTCCBSSEEEEEE----TTEEE
T ss_pred hhhHHHHHHcCCCcCcEEEEEE----CCeEE
Confidence 3457899999999999999996 67664
No 370
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=77.40 E-value=0.83 Score=37.51 Aligned_cols=25 Identities=28% Similarity=0.598 Sum_probs=21.4
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecC
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
|.+.+..|+++|+|+++||++++.+
T Consensus 88 D~d~~~~la~~~~I~siPtl~~F~~ 112 (178)
T 3ga4_A 88 DVNEVPQLVKDLKLQNVPHLVVYPP 112 (178)
T ss_dssp ETTTCHHHHHHTTCCSSCEEEEECC
T ss_pred ECccCHHHHHHcCCCCCCEEEEEcC
Confidence 3345789999999999999999984
No 371
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=77.12 E-value=0.96 Score=33.35 Aligned_cols=27 Identities=15% Similarity=0.525 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|+++++. +|+.+
T Consensus 72 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 98 (117)
T 2xc2_A 72 DKLEETARKYNISAMPTFIAIK----NGEKV 98 (117)
T ss_dssp TTSHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CccHHHHHHcCCCccceEEEEe----CCcEE
Confidence 3457899999999999988885 67664
No 372
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=76.68 E-value=0.94 Score=32.58 Aligned_cols=26 Identities=15% Similarity=0.419 Sum_probs=21.5
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 61 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 86 (107)
T 1dby_A 61 ESPNVASEYGIRSIPTIMVFK----GGKKC 86 (107)
T ss_dssp TCHHHHHHHTCCSSCEEEEES----SSSEE
T ss_pred CCHHHHHHCCCCcCCEEEEEe----CCEEE
Confidence 457899999999999998885 67664
No 373
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=76.23 E-value=1 Score=35.28 Aligned_cols=27 Identities=15% Similarity=0.466 Sum_probs=22.5
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|++++++ +|+.+
T Consensus 72 ~~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 98 (153)
T 2wz9_A 72 EGVPEVSEKYEISSVPTFLFFK----NSQKI 98 (153)
T ss_dssp TTSHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCCCCEEEEEE----CCEEE
Confidence 3457899999999999999998 67664
No 374
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=76.07 E-value=0.98 Score=32.82 Aligned_cols=26 Identities=23% Similarity=0.382 Sum_probs=21.5
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 65 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 90 (112)
T 1t00_A 65 ENPGTAAKYGVMSIPTLNVYQ----GGEVA 90 (112)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHhCCCCcccEEEEEe----CCEEE
Confidence 457899999999999998885 67664
No 375
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=75.95 E-value=1.1 Score=33.80 Aligned_cols=27 Identities=15% Similarity=0.428 Sum_probs=22.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 78 d~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 104 (124)
T 1xfl_A 78 DELKSVASDWAIQAMPTFMFLK----EGKIL 104 (124)
T ss_dssp TTSHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred ccCHHHHHHcCCCccCEEEEEE----CCEEE
Confidence 3457899999999999998885 67765
No 376
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=75.87 E-value=18 Score=27.01 Aligned_cols=60 Identities=20% Similarity=0.302 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCccceEEEECCCC
Q 021505 128 MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEG 207 (311)
Q Consensus 128 ~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~Pt~vlid~~G 207 (311)
+-.+....+.++++ +++|--.++..++..|.+.-. -.++.+.+|+..+|.+++ ||
T Consensus 26 L~~~~~~~~~lk~~---------Gi~V~RyNL~~~P~aF~~N~~-------------V~~~L~~~G~~~LP~~~V---DG 80 (110)
T 3kgk_A 26 LVDFSTDVQWLKQS---------GVQIERFNLAQQPMSFVQNEK-------------VKAFIEASGAEGLPLLLL---DG 80 (110)
T ss_dssp HHHHHHHHHHHHHH---------TCCEEEEETTTCTTHHHHSHH-------------HHHHHHHHCGGGCCEEEE---TT
T ss_pred HHHHHHHHHHHHHC---------CCeEEEEccccChHHHhcCHH-------------HHHHHHHcCcccCCEEEE---CC
Confidence 33445556666665 788888888887766666443 557888899999998764 68
Q ss_pred cEEEe
Q 021505 208 KTVTK 212 (311)
Q Consensus 208 ~iv~~ 212 (311)
+|+..
T Consensus 81 evv~~ 85 (110)
T 3kgk_A 81 ETVMA 85 (110)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88876
No 377
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=75.83 E-value=1.1 Score=32.05 Aligned_cols=26 Identities=15% Similarity=0.387 Sum_probs=21.4
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 62 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 87 (106)
T 1xwb_A 62 ECEDIAMEYNISSMPTFVFLK----NGVKV 87 (106)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred chHHHHHHcCCCcccEEEEEc----CCcEE
Confidence 457899999999999988885 67654
No 378
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=75.81 E-value=2.8 Score=32.54 Aligned_cols=26 Identities=8% Similarity=0.248 Sum_probs=22.9
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.+.|+|.++|+++++++ +|+++
T Consensus 104 ~~~~~~~~~v~~~P~~~lid~---~G~i~ 129 (158)
T 3hdc_A 104 TGQVQQRYGANRLPDTFIVDR---KGIIR 129 (158)
T ss_dssp TSHHHHHTTCCSSSEEEEECT---TSBEE
T ss_pred hHHHHHHhCCCCcceEEEEcC---CCCEE
Confidence 457999999999999999997 88775
No 379
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=75.71 E-value=0.99 Score=34.95 Aligned_cols=28 Identities=25% Similarity=0.521 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+.+..++++|+|.++|+++++. +|+.+
T Consensus 95 ~~~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 122 (148)
T 3p2a_A 95 TEAEPALSTRFRIRSIPTIMLYR----NGKMI 122 (148)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CcCCHHHHHHCCCCccCEEEEEE----CCeEE
Confidence 34567899999999999999996 67664
No 380
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=75.61 E-value=1.1 Score=31.94 Aligned_cols=26 Identities=12% Similarity=0.471 Sum_probs=21.4
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 60 ~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 85 (105)
T 1fb6_A 60 EAPGIATQYNIRSIPTVLFFK----NGERK 85 (105)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred chHHHHHhCCCCcccEEEEEe----CCeEE
Confidence 456899999999999998885 67664
No 381
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=75.16 E-value=1.1 Score=31.77 Aligned_cols=26 Identities=12% Similarity=0.420 Sum_probs=21.4
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 60 ~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 85 (104)
T 2vim_A 60 QNEEAAAKYSVTAMPTFVFIK----DGKEV 85 (104)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCccccEEEEEe----CCcEE
Confidence 456899999999999988886 67664
No 382
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=75.06 E-value=1.2 Score=33.13 Aligned_cols=27 Identities=11% Similarity=0.508 Sum_probs=22.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+.+++++|+|.++|+++++. +|+.+
T Consensus 72 d~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 98 (119)
T 1w4v_A 72 DDHTDLAIEYEVSAVPTVLAMK----NGDVV 98 (119)
T ss_dssp TTTHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCcccEEEEEe----CCcEE
Confidence 3456899999999999999994 77764
No 383
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=75.03 E-value=2.7 Score=34.70 Aligned_cols=25 Identities=16% Similarity=0.239 Sum_probs=19.4
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
+...++.+||.++|+++++ .+|+.+
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~-~~G~~~ 189 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVE-SGTDRY 189 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred HHHHHHHcCCcccceEEEE-ECCEEE
Confidence 3466788999999999887 467653
No 384
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=74.99 E-value=0.96 Score=32.83 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 65 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 91 (112)
T 1ep7_A 65 DAVAAVAEAAGITAMPTFHVYK----DGVKA 91 (112)
T ss_dssp TTTHHHHHHHTCCBSSEEEEEE----TTEEE
T ss_pred CchHHHHHHcCCCcccEEEEEE----CCeEE
Confidence 3457899999999999988875 67764
No 385
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=74.83 E-value=1.1 Score=33.12 Aligned_cols=27 Identities=7% Similarity=0.337 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 70 ~~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 96 (114)
T 2oe3_A 70 DESPDIAKECEVTAMPTFVLGK----DGQLI 96 (114)
T ss_dssp TTCHHHHHHTTCCSBSEEEEEE----TTEEE
T ss_pred CCCHHHHHHCCCCcccEEEEEe----CCeEE
Confidence 3456899999999999998875 67764
No 386
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=74.60 E-value=1 Score=32.68 Aligned_cols=26 Identities=19% Similarity=0.525 Sum_probs=21.9
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 67 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 92 (115)
T 1thx_A 67 PNPTTVKKYKVEGVPALRLVK----GEQIL 92 (115)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCCceeEEEEEc----CCEEE
Confidence 356899999999999999994 78765
No 387
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=74.57 E-value=1.1 Score=33.12 Aligned_cols=27 Identities=19% Similarity=0.582 Sum_probs=21.9
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 74 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 100 (122)
T 2vlu_A 74 DELKPIAEQFSVEAMPTFLFMK----EGDVK 100 (122)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCcccEEEEEe----CCEEE
Confidence 3457899999999999998885 67764
No 388
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=74.30 E-value=0.64 Score=34.16 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=21.5
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++ . +|+.+
T Consensus 59 ~~~~l~~~~~v~~~Pt~~~~-~---~G~~~ 84 (112)
T 2voc_A 59 ENQETAGKYGVMSIPTLLVL-K---DGEVV 84 (112)
T ss_dssp TCCSHHHHTTCCSBSEEEEE-E---TTEEE
T ss_pred CCHHHHHHcCCCcccEEEEE-e---CCEEE
Confidence 34579999999999999999 4 78764
No 389
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=74.25 E-value=1.2 Score=31.54 Aligned_cols=26 Identities=4% Similarity=0.425 Sum_probs=21.8
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 57 ~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 82 (104)
T 2e0q_A 57 ENPDIAARYGVMSLPTVIFFK----DGEPV 82 (104)
T ss_dssp TCHHHHHHTTCCSSCEEEEEE----TTEEE
T ss_pred CCHHHHHhCCccccCEEEEEE----CCeEh
Confidence 457899999999999999984 67764
No 390
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=74.15 E-value=1.2 Score=31.93 Aligned_cols=26 Identities=8% Similarity=0.367 Sum_probs=21.8
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 60 ~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 85 (109)
T 2yzu_A 60 ENPKTAMRYRVMSIPTVILFK----DGQPV 85 (109)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHhHHHhCCCCcCCEEEEEe----CCcEe
Confidence 457899999999999999984 67764
No 391
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=73.87 E-value=1.4 Score=32.14 Aligned_cols=26 Identities=15% Similarity=0.310 Sum_probs=21.3
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 67 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 92 (112)
T 1syr_A 67 EVSEVTEKENITSMPTFKVYK----NGSSV 92 (112)
T ss_dssp TTHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCCcccEEEEEE----CCcEE
Confidence 456899999999999988875 67664
No 392
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=73.86 E-value=2.5 Score=32.05 Aligned_cols=28 Identities=14% Similarity=0.350 Sum_probs=24.1
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
...+.+.|+|.++|+++++++ +|+++..
T Consensus 103 ~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 130 (148)
T 3fkf_A 103 SSETAKQYAILTLPTNILLSP---TGKILAR 130 (148)
T ss_dssp GCHHHHHTTCCSSSEEEEECT---TSBEEEE
T ss_pred chHHHHhcCCCCcCEEEEECC---CCeEEEe
Confidence 468999999999999999997 8887643
No 393
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=73.57 E-value=1.3 Score=32.58 Aligned_cols=27 Identities=22% Similarity=0.545 Sum_probs=22.0
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|.++|+++++. +|+.+
T Consensus 71 ~~~~~~~~~~~i~~~Pt~~~~~----~g~~~ 97 (121)
T 2i1u_A 71 DTNPETARNFQVVSIPTLILFK----DGQPV 97 (121)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHhcCCCcCCEEEEEE----CCEEE
Confidence 3457899999999999999886 67664
No 394
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=73.55 E-value=0.85 Score=32.88 Aligned_cols=26 Identities=23% Similarity=0.566 Sum_probs=21.5
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 62 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 87 (108)
T 2trx_A 62 QNPGTAPKYGIRGIPTLLLFK----NGEVA 87 (108)
T ss_dssp TCTTHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCcccCEEEEEe----CCEEE
Confidence 346789999999999999994 77764
No 395
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=73.25 E-value=1.2 Score=36.10 Aligned_cols=12 Identities=17% Similarity=-0.089 Sum_probs=10.7
Q ss_pred cceeEeCCCCCC
Q 021505 282 SGWAYQCLECGY 293 (311)
Q Consensus 282 ~~w~~~C~~c~~ 293 (311)
.+|+.||++|.-
T Consensus 52 ~F~atwC~~C~~ 63 (187)
T 3dwv_A 52 YNVASKCGYTKG 63 (187)
T ss_dssp EEECCBCSCCTT
T ss_pred EEecCCCCCcHH
Confidence 799999999964
No 396
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=73.19 E-value=1.3 Score=33.55 Aligned_cols=27 Identities=7% Similarity=0.286 Sum_probs=21.9
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....|+++|+|.++|+++++. +|+.+
T Consensus 77 d~~~~l~~~~~v~~~Pt~~i~~----~G~~~ 103 (125)
T 1r26_A 77 DNNSEIVSKCRVLQLPTFIIAR----SGKML 103 (125)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCcccEEEEEe----CCeEE
Confidence 3457899999999999988885 67664
No 397
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=73.19 E-value=1.3 Score=32.29 Aligned_cols=27 Identities=11% Similarity=0.496 Sum_probs=22.1
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 94 (118)
T 2vm1_A 68 DELKDVAEAYNVEAMPTFLFIK----DGEKV 94 (118)
T ss_dssp TTSHHHHHHTTCCSBSEEEEEE----TTEEE
T ss_pred ccCHHHHHHcCCCcCcEEEEEe----CCeEE
Confidence 3457899999999999999885 67764
No 398
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=73.14 E-value=2 Score=32.95 Aligned_cols=26 Identities=19% Similarity=0.423 Sum_probs=22.9
Q ss_pred HHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 15 KALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..+.++|+|.++|+++++++ +|+++.
T Consensus 98 ~~~~~~~~v~~~P~~~lid~---~G~i~~ 123 (152)
T 2lja_A 98 RTFMDAYLINGIPRFILLDR---DGKIIS 123 (152)
T ss_dssp THHHHHTTCCSSCCEEEECT---TSCEEE
T ss_pred hhHHHHcCcCCCCEEEEECC---CCeEEE
Confidence 47899999999999999997 888764
No 399
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=73.11 E-value=26 Score=25.96 Aligned_cols=75 Identities=11% Similarity=0.266 Sum_probs=49.4
Q ss_pred EEEEecCCCh--hhH----hhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHH
Q 021505 113 GLYFSARWCI--PCE----KFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 186 (311)
Q Consensus 113 ll~F~a~wC~--~C~----~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 186 (311)
-||=-|-.|+ .|- ..+-.+....+.++++ +++|--.++..++..|.+.-. -.
T Consensus 8 ~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~---------Gi~V~RyNL~~~P~~F~~N~~-------------V~ 65 (106)
T 3ktb_A 8 EIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQ---------GIIVTRHNLRDEPQVYVSNKT-------------VN 65 (106)
T ss_dssp EEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHT---------TCCCEEEETTTCTTHHHHSHH-------------HH
T ss_pred EEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHC---------CCEEEEEccccChHHHhcCHH-------------HH
Confidence 3444466665 243 2233445555566654 788888888887766666443 55
Q ss_pred HHHHhCCCCccceEEEECCCCcEEEe
Q 021505 187 ELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 187 ~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
++.+.+|+..+|.+++ ||+|+..
T Consensus 66 ~~L~~~G~~~LP~~~V---DGevv~~ 88 (106)
T 3ktb_A 66 DFLQKHGADALPITLV---DGEIAVS 88 (106)
T ss_dssp HHHHTTCGGGCSEEEE---TTEEEEC
T ss_pred HHHHHcCcccCCEEEE---CCEEEEe
Confidence 7788899999998764 6888876
No 400
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=72.95 E-value=0.94 Score=32.44 Aligned_cols=26 Identities=12% Similarity=0.388 Sum_probs=21.6
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+..++++|+|.++|+++++. +|+.+
T Consensus 62 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 87 (107)
T 2i4a_A 62 DNPETPNAYQVRSIPTLMLVR----DGKVI 87 (107)
T ss_dssp TCCHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHhcCCCccCEEEEEe----CCEEE
Confidence 346799999999999999994 77765
No 401
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=72.90 E-value=0.8 Score=33.97 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=19.7
Q ss_pred HHHHHHHhhcccCCCCeeEEecC
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
+....++++|+|.++|++++++.
T Consensus 62 ~~~~~~~~~~~v~~~Pt~~~~~~ 84 (122)
T 3aps_A 62 QAYPQTCQKAGIKAYPSVKLYQY 84 (122)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEEE
T ss_pred cCCHHHHHHcCCCccceEEEEeC
Confidence 34578999999999999999974
No 402
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=72.89 E-value=1 Score=33.53 Aligned_cols=22 Identities=14% Similarity=0.433 Sum_probs=19.2
Q ss_pred HHHHHHHhhcccCCCCeeEEec
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQ 33 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~ 33 (311)
+....++++|+|.++|++++++
T Consensus 63 ~~~~~~~~~~~i~~~Pt~~~~~ 84 (118)
T 2f51_A 63 DKNGNAADAYGVSSIPALFFVK 84 (118)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCHHHHHhcCCCCCCEEEEEe
Confidence 3457899999999999999987
No 403
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=72.70 E-value=1.4 Score=35.94 Aligned_cols=32 Identities=16% Similarity=0.383 Sum_probs=24.4
Q ss_pred CHHHHHHHHhhc--------ccCCCCeeEEecCCCCCCceeec
Q 021505 10 DLETKKALNRKF--------DIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 10 d~~~~~~l~~~~--------~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
|.+.+..+.+.| ++.|+|+++++++ +|+++..
T Consensus 81 D~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~---dG~~v~~ 120 (173)
T 3ira_A 81 DREERPDIDNIYMTVCQIILGRGGWPLNIIMTP---GKKPFFA 120 (173)
T ss_dssp ETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECT---TSCEEEE
T ss_pred CCcccCcHHHHHHHHHHHHcCCCCCcceeeECC---CCCceee
Confidence 334445677777 9999999999997 8888643
No 404
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=72.68 E-value=24 Score=26.79 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=29.0
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CHHHHHHHHh
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQTSFESYFG 171 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~~~~~~~~~ 171 (311)
+..|+.++|+.|++....|.+ + ++.+..+.++. +.+++.+++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~---------gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------H---------EIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------T---------TCCEEEEETTTSCCCHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH-------c---------CCceEEEEccCCCccHHHHHHHHH
Confidence 445778999999987776653 2 45566666654 3467777765
No 405
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=72.56 E-value=1.2 Score=35.21 Aligned_cols=27 Identities=22% Similarity=0.540 Sum_probs=22.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+.+..++++|+|+++|+++++. +|+.+
T Consensus 105 ~~~~~l~~~~~i~~~Pt~~~~~----~G~~~ 131 (155)
T 2ppt_A 105 QAHPAVAGRHRIQGIPAFILFH----KGREL 131 (155)
T ss_dssp TTSTHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CccHHHHHHcCCCcCCEEEEEe----CCeEE
Confidence 3456899999999999999985 67764
No 406
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=72.36 E-value=2.7 Score=31.04 Aligned_cols=26 Identities=8% Similarity=0.231 Sum_probs=22.9
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.++|+|.++|+++++++ +|+++
T Consensus 93 ~~~~~~~~~v~~~P~~~lid~---~G~i~ 118 (138)
T 4evm_A 93 SGKLLETYGVRSYPTQAFIDK---EGKLV 118 (138)
T ss_dssp TCHHHHHTTCCSSSEEEEECT---TCCEE
T ss_pred chHHHHHcCcccCCeEEEECC---CCcEE
Confidence 457999999999999999997 88875
No 407
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=71.32 E-value=3 Score=31.99 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=24.2
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceeec
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~~ 44 (311)
...+.+.|+|.++|+++++++ +|+++..
T Consensus 105 ~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 132 (150)
T 3fw2_A 105 NSEVAKQYSIYKIPANILLSS---DGKILAK 132 (150)
T ss_dssp GCHHHHHTTCCSSSEEEEECT---TSBEEEE
T ss_pred chHHHHHcCCCccCeEEEECC---CCEEEEc
Confidence 458999999999999999997 8988644
No 408
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=71.23 E-value=0.9 Score=36.59 Aligned_cols=11 Identities=18% Similarity=0.151 Sum_probs=10.0
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|++||++|.
T Consensus 44 ~F~atwC~~C~ 54 (180)
T 3kij_A 44 VNVASDCQLTD 54 (180)
T ss_dssp EEECSSSTTHH
T ss_pred EEEecCCCCcH
Confidence 79999999995
No 409
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=70.61 E-value=1.2 Score=32.18 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=22.1
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 66 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 92 (113)
T 1ti3_A 66 DELKAVAEEWNVEAMPTFIFLK----DGKLV 92 (113)
T ss_dssp TTCHHHHHHHHCSSTTEEEEEE----TTEEE
T ss_pred cccHHHHHhCCCCcccEEEEEe----CCEEE
Confidence 3457899999999999999985 67764
No 410
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=70.52 E-value=1.5 Score=32.73 Aligned_cols=26 Identities=12% Similarity=0.399 Sum_probs=21.6
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 76 ~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 101 (121)
T 2j23_A 76 EQSQIAQEVGIRAMPTFVFFK----NGQKI 101 (121)
T ss_dssp TCHHHHHHHTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCCcccEEEEEE----CCeEE
Confidence 456899999999999999886 67664
No 411
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=70.51 E-value=2.3 Score=34.62 Aligned_cols=23 Identities=26% Similarity=0.455 Sum_probs=18.2
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
...+++.+||.++|+++| +|+.+
T Consensus 141 ~~~~a~~~gv~GtPtfvv---ng~~~ 163 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV---NGKYN 163 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE---TTTEE
T ss_pred HHHHHHHcCCCccCEEEE---CCEEE
Confidence 446788999999999986 56654
No 412
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=70.28 E-value=3.4 Score=32.66 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.6
Q ss_pred HHhhcccCCCCeeEEecCCCCCCceee
Q 021505 17 LNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 17 l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+...|++.++||++++++ +|+.+.
T Consensus 92 ~~~~~~v~~~PT~~f~~~---~G~~v~ 115 (151)
T 3ph9_A 92 KNLSPDGQYVPRIMFVDP---SLTVRA 115 (151)
T ss_dssp GGGCTTCCCSSEEEEECT---TSCBCT
T ss_pred hHhhcCCCCCCEEEEECC---CCCEEE
Confidence 567899999999999997 887753
No 413
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=70.05 E-value=3.4 Score=31.17 Aligned_cols=47 Identities=17% Similarity=0.352 Sum_probs=30.5
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecC---CCHHHHHHHHhcCCC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---RDQTSFESYFGTMPW 175 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d---~~~~~~~~~~~~~~~ 175 (311)
+..|..++|+.|++....|.+ + ++.+-.+.++ .+.+++.+++...+|
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~---------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------H---------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------H---------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHH-------c---------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 445678999999988776654 2 3445555554 245777777766653
No 414
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=69.82 E-value=1 Score=34.62 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=22.4
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....|+++|+|.++|+++++. +|+.+
T Consensus 65 ~~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 91 (140)
T 3hz4_A 65 ATNPWTAEKYGVQGTPTFKFFC----HGRPV 91 (140)
T ss_dssp TTCHHHHHHHTCCEESEEEEEE----TTEEE
T ss_pred CcCHhHHHHCCCCcCCEEEEEe----CCcEE
Confidence 3457899999999999999985 67664
No 415
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.78 E-value=1.1 Score=33.71 Aligned_cols=22 Identities=23% Similarity=0.632 Sum_probs=19.2
Q ss_pred HHHHHHHhhcccCCCCeeEEec
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQ 33 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~ 33 (311)
+.+..|+++|+|.++|++++++
T Consensus 70 ~~~~~l~~~~~v~~~Pt~~~~~ 91 (133)
T 1x5d_A 70 TVNQVLASRYGIRGFPTIKIFQ 91 (133)
T ss_dssp TTCCHHHHHHTCCSSSEEEEEE
T ss_pred CCCHHHHHhCCCCeeCeEEEEe
Confidence 3456899999999999999998
No 416
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.70 E-value=2.6 Score=32.01 Aligned_cols=29 Identities=14% Similarity=0.460 Sum_probs=23.5
Q ss_pred CHHHHHHHHhhcccC------CCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIE------GIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~------~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....++++|+|. ++|+++++. +|+.+
T Consensus 66 d~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~----~G~~~ 100 (137)
T 2dj0_A 66 DVGRYTDVSTRYKVSTSPLTKQLPTLILFQ----GGKEA 100 (137)
T ss_dssp CTTTCHHHHHHTTCCCCSSSSCSSEEEEES----SSSEE
T ss_pred eCccCHHHHHHccCcccCCcCCCCEEEEEE----CCEEE
Confidence 444567899999999 999999996 67765
No 417
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=69.59 E-value=3.4 Score=31.12 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=23.3
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..++.+.|+|.++|+++++++ +|+++.
T Consensus 99 ~~~~~~~~~v~~~P~~~lid~---~G~i~~ 125 (148)
T 2b5x_A 99 DHALTDAFENEYVPAYYVFDK---TGQLRH 125 (148)
T ss_dssp SCHHHHHTCCCCSSEEEEECT---TCBEEE
T ss_pred chhHHHHhCCCCCCEEEEECC---CCcEEE
Confidence 457999999999999999987 888753
No 418
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=69.28 E-value=2.8 Score=30.29 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=20.3
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...++++|+|.++|+++++. +|+.+
T Consensus 67 ~~~~~~~~~v~~~Pt~~~~~----~G~~~ 91 (111)
T 2pu9_C 67 NKTLAKELGIRVVPTFKILK----ENSVV 91 (111)
T ss_dssp THHHHHHHCCSBSSEEEEES----SSSEE
T ss_pred hHHHHHHcCCCeeeEEEEEe----CCcEE
Confidence 57899999999999976664 67764
No 419
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.25 E-value=1.6 Score=41.26 Aligned_cols=36 Identities=33% Similarity=0.718 Sum_probs=28.9
Q ss_pred CCCCcccccccCCCcc---eeEeCCCCCCCccccccccc
Q 021505 268 GGGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAV 303 (311)
Q Consensus 268 ~~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~ 303 (311)
-..+-+|+.|+....| -.+.|..|++-.|.+|....
T Consensus 217 ~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~v 255 (463)
T 3cxl_A 217 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMV 255 (463)
T ss_dssp CSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTS
T ss_pred cCCCCcchhhhhhhhhHHhcCeeccccCccccccccccc
Confidence 3467899999987543 27999999999999998553
No 420
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=69.12 E-value=11 Score=28.51 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=31.4
Q ss_pred CCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCe-EEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHHHhCCCCcc
Q 021505 119 RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDF-EVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGI 197 (311)
Q Consensus 119 ~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~ 197 (311)
|.||+|.+....|.+ + ++ .+..+.++.+.+ . ...+.+.-+-..+
T Consensus 33 P~C~fc~~ak~lL~~----~------------gv~~~~~~~v~~~~~-~------------------r~~l~~~sg~~Tv 77 (118)
T 2wul_A 33 PQCGFSNAVVQILRL----H------------GVRDYAAYNVLDDPE-L------------------RQGIKDYSNWPTI 77 (118)
T ss_dssp BSSHHHHHHHHHHHH----T------------TCCSCEEEETTSCHH-H------------------HHHHHHHHTCCSS
T ss_pred CCCHHHHHHHHHHHH----h------------CCcCeEeecccCCHH-H------------------HHHHHHhccCCCC
Confidence 579999887765532 1 22 245566665542 1 2345555577778
Q ss_pred ceEEEECCCCcEE
Q 021505 198 PCLVIIGPEGKTV 210 (311)
Q Consensus 198 Pt~vlid~~G~iv 210 (311)
|.+|| +|+.|
T Consensus 78 PqIFI---~g~~I 87 (118)
T 2wul_A 78 PQVYL---NGEFV 87 (118)
T ss_dssp CEEEE---TTEEE
T ss_pred CeEeE---CCEEE
Confidence 88754 35554
No 421
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=68.83 E-value=1.4 Score=33.54 Aligned_cols=27 Identities=11% Similarity=0.374 Sum_probs=22.4
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 86 ~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 112 (139)
T 3d22_A 86 DELSDFSASWEIKATPTFFFLR----DGQQV 112 (139)
T ss_dssp TTSHHHHHHTTCCEESEEEEEE----TTEEE
T ss_pred cccHHHHHHcCCCcccEEEEEc----CCeEE
Confidence 3457899999999999999884 78765
No 422
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=68.68 E-value=1.8 Score=33.02 Aligned_cols=26 Identities=15% Similarity=0.526 Sum_probs=21.8
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 92 ~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 117 (140)
T 1v98_A 92 EHPGLAARYGVRSVPTLVLFR----RGAPV 117 (140)
T ss_dssp TCHHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHCCCCccCEEEEEe----CCcEE
Confidence 457899999999999999985 67764
No 423
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=68.50 E-value=3.6 Score=31.89 Aligned_cols=28 Identities=11% Similarity=0.256 Sum_probs=23.8
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
....++++|+|.++|+++++++ +|+++.
T Consensus 109 ~~~~~~~~~~v~~~P~~~lid~---~G~i~~ 136 (164)
T 2h30_A 109 NGGTIAQNLNISVYPSWALIGK---DGDVQR 136 (164)
T ss_dssp TTCHHHHHTTCCSSSEEEEECT---TSCEEE
T ss_pred CchHHHHHcCCCccceEEEECC---CCcEEE
Confidence 3568999999999999999987 887753
No 424
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=68.35 E-value=3.7 Score=31.68 Aligned_cols=24 Identities=21% Similarity=0.476 Sum_probs=21.5
Q ss_pred HHhhcccCCCCeeEEecCCCCCCceee
Q 021505 17 LNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 17 l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+.+.|+|.++|+++++++ +|+++.
T Consensus 112 ~~~~~~v~~~P~~~lid~---~G~i~~ 135 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADR---KGRIRQ 135 (160)
T ss_dssp HHHHTTCCSSSEEEEECT---TSBEEE
T ss_pred HHHhcccCccceEEEECC---CCcEEE
Confidence 899999999999999997 888753
No 425
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=68.27 E-value=3.8 Score=30.31 Aligned_cols=26 Identities=12% Similarity=0.357 Sum_probs=22.7
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.+.|+|.++|+++++++ +|+++
T Consensus 90 ~~~~~~~~~i~~~P~~~~id~---~g~i~ 115 (136)
T 1zzo_A 90 DGSVWANFGVTQQPAYAFVDP---HGNVD 115 (136)
T ss_dssp TCHHHHHTTCCSSSEEEEECT---TCCEE
T ss_pred CcHHHHHcCCCCCceEEEECC---CCCEE
Confidence 467899999999999999997 88875
No 426
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=68.19 E-value=1.1 Score=37.49 Aligned_cols=11 Identities=9% Similarity=-0.402 Sum_probs=10.2
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|++||++|.
T Consensus 53 ~FwatwC~~C~ 63 (208)
T 2f8a_A 53 ENVASLGGTTV 63 (208)
T ss_dssp EEECSSSTTHH
T ss_pred EEECCCCccHH
Confidence 79999999996
No 427
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=68.08 E-value=1.9 Score=32.87 Aligned_cols=21 Identities=19% Similarity=0.455 Sum_probs=18.4
Q ss_pred HHHHHHHhhcccCCCCeeEEe
Q 021505 12 ETKKALNRKFDIEGIPCLVVL 32 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~ 32 (311)
+....|+++|+|+++|+++++
T Consensus 79 ~~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 79 DIHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp TTCHHHHHHTTCCSSSEEEEE
T ss_pred cchHHHHHhcCCCCCCEEEEE
Confidence 345789999999999999998
No 428
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=67.37 E-value=3.7 Score=31.61 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=22.2
Q ss_pred HHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 16 ALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 16 ~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
++.+.|+|.++|+++++++ +|+++.
T Consensus 108 ~~~~~~~v~~~P~~~lid~---~G~i~~ 132 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDK---AGDLRA 132 (158)
T ss_dssp HHHHHTTCCSSSEEEEECT---TSEEEE
T ss_pred HHHHHcCCCCCCEEEEECC---CCCEEE
Confidence 6899999999999999997 888753
No 429
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=67.24 E-value=4.1 Score=31.23 Aligned_cols=27 Identities=15% Similarity=0.352 Sum_probs=23.9
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....+.+.|+|.++|+++++++ +|+++
T Consensus 97 ~~~~~~~~~~v~~~P~~~lid~---~G~i~ 123 (154)
T 3ia1_A 97 RPHEVAARFKVLGQPWTFVVDR---EGKVV 123 (154)
T ss_dssp CHHHHHTTSSBCSSCEEEEECT---TSEEE
T ss_pred chHHHHHHhCCCcccEEEEECC---CCCEE
Confidence 4578999999999999999997 88875
No 430
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=67.13 E-value=3.9 Score=32.45 Aligned_cols=28 Identities=14% Similarity=0.393 Sum_probs=23.2
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCC-Ccee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDK-DDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~-g~~~ 42 (311)
.....|.++|++.++|+++++++ + |+.+
T Consensus 88 ~~~~~l~~~y~v~~~P~~~fld~---~~G~~l 116 (153)
T 2dlx_A 88 EEGQRYIQFYKLGDFPYVSILDP---RTGQKL 116 (153)
T ss_dssp HHHHHHHHHHTCCSSSEEEEECT---TTCCCC
T ss_pred HhHHHHHHHcCCCCCCEEEEEeC---CCCcEe
Confidence 34578999999999999999997 5 6554
No 431
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=66.92 E-value=2.9 Score=31.41 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=22.9
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.++|+|.++|+++++++ +|+++
T Consensus 103 ~~~~~~~~~v~~~P~~~lid~---~G~i~ 128 (145)
T 3erw_A 103 KGELMKEYHIITIPTSFLLNE---KGEIE 128 (145)
T ss_dssp SSHHHHHTTCCEESEEEEECT---TCCEE
T ss_pred chhHHHhcCcCccCeEEEEcC---CCcEE
Confidence 357999999999999999997 88875
No 432
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=70.19 E-value=1.2 Score=33.50 Aligned_cols=27 Identities=26% Similarity=0.541 Sum_probs=21.8
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCce
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDA 41 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~ 41 (311)
....++++|+|.++|+++++++ .+|++
T Consensus 66 ~~~~~~~~~~v~~~Pt~~~~d~--~~G~~ 92 (130)
T 2lst_A 66 EGQELARRYRVPGTPTFVFLVP--KAGAW 92 (130)
Confidence 4578999999999999999975 24654
No 433
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=66.75 E-value=3.9 Score=31.36 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=23.2
Q ss_pred HHHHHHhhcc--cCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFD--IEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~--i~~~P~l~~~~~~~~~g~~~ 42 (311)
....+.+.|+ +.++|+++++++ +|+++
T Consensus 91 ~~~~~~~~~~~~v~~~P~~~lid~---~G~i~ 119 (151)
T 3raz_A 91 NSRNFMKTYGNTVGVLPFTVVEAP---KCGYR 119 (151)
T ss_dssp CHHHHHHTTTCCSCCSSEEEEEET---TTTEE
T ss_pred chHHHHHHhCCccCCCCEEEEECC---CCcEE
Confidence 3577999999 999999999997 88774
No 434
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=66.73 E-value=3 Score=32.32 Aligned_cols=25 Identities=4% Similarity=0.365 Sum_probs=22.2
Q ss_pred HHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 16 ALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 16 ~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
.+.+.|+|.++|+++++++ +|+++.
T Consensus 104 ~~~~~~~v~~~P~~~lid~---~G~i~~ 128 (152)
T 2lrt_A 104 SYISLYNVTNLPSVFLVNR---NNELSA 128 (152)
T ss_dssp HHHHHHTCCSCSEEEEEET---TTEEEE
T ss_pred HHHHHcCcccCceEEEECC---CCeEEE
Confidence 5899999999999999997 898764
No 435
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=66.32 E-value=4.4 Score=30.05 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=22.7
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.+.|+|.++|+++++++ +|+++
T Consensus 88 ~~~~~~~~~i~~~P~~~lid~---~G~i~ 113 (136)
T 1lu4_A 88 DGVIWARYNVPWQPAFVFYRA---DGTST 113 (136)
T ss_dssp TSHHHHHTTCCSSSEEEEECT---TSCEE
T ss_pred chhHHHhcCCCCCCEEEEECC---CCcEE
Confidence 457899999999999999987 88875
No 436
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=66.31 E-value=3.2 Score=31.02 Aligned_cols=45 Identities=11% Similarity=0.149 Sum_probs=28.9
Q ss_pred EEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CHHHHHHHHhcCC
Q 021505 114 LYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQTSFESYFGTMP 174 (311)
Q Consensus 114 l~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~~~~~~~~~~~~ 174 (311)
..|..++|+.|++....|.+ + ++.+-.+.++. +.+++.+++...+
T Consensus 3 ~iY~~~~C~~C~kak~~L~~-------~---------gi~~~~~di~~~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 3 VLYGIKACDTMKKARTWLDE-------H---------KVAYDFHDYKAVGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------T---------TCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred EEEECCCChHHHHHHHHHHH-------C---------CCceEEEeecCCCCCHHHHHHHHHhCC
Confidence 45678999999987776643 2 45566666543 4466666665444
No 437
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=66.25 E-value=3.2 Score=30.67 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=20.7
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+..++++|+|.++|+++++. +|+.+
T Consensus 80 ~~~~~~~~~v~~~Pt~~~~~----~G~~~ 104 (124)
T 1faa_A 80 NKTLAKELGIRVVPTFKILK----ENSVV 104 (124)
T ss_dssp THHHHHHHCCSSSSEEEEEE----TTEEE
T ss_pred hHHHHHHcCCCeeeEEEEEe----CCcEE
Confidence 47899999999999987775 67764
No 438
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=66.21 E-value=4.3 Score=30.93 Aligned_cols=26 Identities=15% Similarity=0.406 Sum_probs=22.5
Q ss_pred HHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 15 KALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..+.+.|+|.++|+++++++ +|+++.
T Consensus 95 ~~~~~~~~v~~~P~~~lid~---~G~i~~ 120 (152)
T 3gl3_A 95 GQTPRLYGVKGMPTSFLIDR---NGKVLL 120 (152)
T ss_dssp CHHHHHTTCCSSSEEEEECT---TSBEEE
T ss_pred chhHHHcCCCCCCeEEEECC---CCCEEE
Confidence 36889999999999999997 888753
No 439
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=66.15 E-value=1.2 Score=34.86 Aligned_cols=11 Identities=18% Similarity=0.211 Sum_probs=9.7
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|++||++|.
T Consensus 37 ~f~a~~C~~C~ 47 (169)
T 2v1m_A 37 VNVACKCGATD 47 (169)
T ss_dssp EEECSSSTTHH
T ss_pred EEeeccCCchH
Confidence 79999999994
No 440
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=65.81 E-value=2 Score=32.59 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=21.0
Q ss_pred HHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 15 KALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..++.+|+|.++||++++. +|+.+.
T Consensus 66 ~~la~~~~V~g~PT~i~f~----~G~ev~ 90 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMA----GDVESG 90 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEE----TTEEEE
T ss_pred hhHHHHCCCCCCCEEEEEE----CCEEEe
Confidence 4678899999999999998 687654
No 441
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=65.81 E-value=1.8 Score=34.79 Aligned_cols=20 Identities=40% Similarity=1.223 Sum_probs=13.7
Q ss_pred ceeEeCCCCC--CC------cccccccc
Q 021505 283 GWAYQCLECG--YE------VHPKCVRA 302 (311)
Q Consensus 283 ~w~~~C~~c~--~~------~h~~c~~~ 302 (311)
-|.|+|..|+ |+ .||.|...
T Consensus 130 ~~~y~C~~Cg~~~~~~~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTLPPGGVCPDCGSK 157 (165)
T ss_dssp CCCEEESSSCCEESSCCGGGBCTTTCCB
T ss_pred cEEEECCCCCCcccCCCCCCcCCCCCCc
Confidence 4778888886 54 57777654
No 442
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=65.80 E-value=9.9 Score=36.18 Aligned_cols=24 Identities=17% Similarity=0.005 Sum_probs=13.1
Q ss_pred EEEEEecCCChhhHhhhHHHHHHH
Q 021505 112 VGLYFSARWCIPCEKFMPKLLSIY 135 (311)
Q Consensus 112 vll~F~a~wC~~C~~~~p~l~~l~ 135 (311)
|.|.++..-|..|..+...|+++.
T Consensus 21 v~l~~~~~~~~~~~~~~~~~~~~~ 44 (521)
T 1hyu_A 21 VELIATLDDSAKSAEIKELLAEIA 44 (521)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcchHHHHHHHHHHH
Confidence 333344445777766665555543
No 443
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=65.75 E-value=1.7 Score=34.07 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=21.9
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 64 d~~~~l~~~~~v~~~Pt~~~~~----~G~~v 90 (149)
T 3gix_A 64 DQTAVYTQYFDISYIPSTVFFF----NGQHM 90 (149)
T ss_dssp TTCCHHHHHTTCCSSSEEEEEE----TTEEE
T ss_pred CcCHHHHHHcCCCccCeEEEEE----CCeEE
Confidence 4457899999999999999665 67665
No 444
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=65.46 E-value=5.3 Score=32.03 Aligned_cols=31 Identities=16% Similarity=-0.010 Sum_probs=25.0
Q ss_pred CHHHHHHHHhhcc---cCCCCeeEEecCCCCCCceee
Q 021505 10 DLETKKALNRKFD---IEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 10 d~~~~~~l~~~~~---i~~~P~l~~~~~~~~~g~~~~ 43 (311)
|.+....+.++|. +.++||+++++. +|+++.
T Consensus 92 ~~d~~~~~~~~~~~~~v~~iPt~i~~~~---~G~~~~ 125 (167)
T 1z6n_A 92 SKGRAEDDLRQRLALERIAIPLVLVLDE---EFNLLG 125 (167)
T ss_dssp CHHHHHHHTTTTTTCSSCCSSEEEEECT---TCCEEE
T ss_pred ECCCCHHHHHHHHHcCCCCcCeEEEECC---CCCEEE
Confidence 5667788999997 999999999995 666643
No 445
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=65.33 E-value=2.3 Score=36.83 Aligned_cols=28 Identities=14% Similarity=0.458 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+.+..++++|+|.++||++++. +|+.+
T Consensus 66 ~~~~~~~~~~~~v~~~Pt~~~~~----~G~~~ 93 (287)
T 3qou_A 66 CDAEQMIAAQFGLRAIPTVYLFQ----NGQPV 93 (287)
T ss_dssp TTTCHHHHHTTTCCSSSEEEEEE----TTEEE
T ss_pred CccCHHHHHHcCCCCCCeEEEEE----CCEEE
Confidence 34467899999999999999996 67665
No 446
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=65.19 E-value=3.2 Score=40.24 Aligned_cols=21 Identities=29% Similarity=0.407 Sum_probs=16.2
Q ss_pred EEEEecCCChhhHhhhHHHHH
Q 021505 113 GLYFSARWCIPCEKFMPKLLS 133 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~ 133 (311)
++.|..+|||+|.+....|.+
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 455888999999987776653
No 447
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=64.86 E-value=4.4 Score=30.93 Aligned_cols=27 Identities=11% Similarity=0.421 Sum_probs=23.0
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
...+.+.|+|.++|+++++++ +|+++.
T Consensus 92 ~~~~~~~~~v~~~P~~~lid~---~G~i~~ 118 (151)
T 2f9s_A 92 DRQVLDAYDVSPLPTTFLINP---EGKVVK 118 (151)
T ss_dssp TSHHHHHTTCCSSCEEEEECT---TSEEEE
T ss_pred chHHHHhcCCCCCCeEEEECC---CCcEEE
Confidence 357899999999999999987 888753
No 448
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=64.78 E-value=0.98 Score=35.12 Aligned_cols=28 Identities=4% Similarity=0.190 Sum_probs=22.3
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+.+..++++|+|+++|+++++. +|+.+.
T Consensus 64 d~~~~~~~~~~i~~~Pt~~~~~----~G~~v~ 91 (142)
T 1qgv_A 64 TEVPDFNKMYELYDPCTVMFFF----RNKHIM 91 (142)
T ss_dssp TTCCTTTTSSCSCSSCEEEEEE----TTEEEE
T ss_pred ccCHHHHHHcCCCCCCEEEEEE----CCcEEE
Confidence 3446789999999999999986 676653
No 449
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=64.67 E-value=7.8 Score=31.80 Aligned_cols=27 Identities=22% Similarity=0.226 Sum_probs=19.3
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEEEe
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTVTK 212 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv~~ 212 (311)
+...++.+||.++|+++|- .+|+.+..
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~-~~~~~~~~ 184 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQ-INDAYFPI 184 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHHHcCCCcccEEEEE-ECCEEEEe
Confidence 3356678999999998876 45665443
No 450
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=67.93 E-value=1.4 Score=31.20 Aligned_cols=29 Identities=14% Similarity=0.460 Sum_probs=22.7
Q ss_pred CHHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 10 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
|.+....++++|+|.++|+++++. +|+.+
T Consensus 58 ~~~~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 86 (106)
T 2yj7_A 58 NVDENPNTAAQYGIRSIPTLLLFK----NGQVV 86 (106)
Confidence 344567899999999999999884 66653
No 451
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=63.68 E-value=18 Score=30.64 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=39.9
Q ss_pred CCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHH
Q 021505 109 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 188 (311)
Q Consensus 109 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 188 (311)
.++++|-|+.++| ....+.+.++++.+++. +.+..++ +.++
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~----------~~F~~t~--------------------------~~~v 65 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED----------YKFHHTF--------------------------STEI 65 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT----------CCEEEEC--------------------------CHHH
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC----------cEEEEEC--------------------------cHHH
Confidence 4578888888864 56677778888887653 4444332 3367
Q ss_pred HHhCCCCccceEEEECC
Q 021505 189 TKYFDVQGIPCLVIIGP 205 (311)
Q Consensus 189 ~~~~~v~~~Pt~vlid~ 205 (311)
++.|++.. |+++++-+
T Consensus 66 ~~~~~v~~-p~ivlfk~ 81 (250)
T 3ec3_A 66 AKFLKVSL-GKLVLMQP 81 (250)
T ss_dssp HHHHTCCS-SEEEEECC
T ss_pred HHHcCCCC-CeEEEEec
Confidence 78899987 99999964
No 452
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=63.50 E-value=4.6 Score=31.41 Aligned_cols=26 Identities=19% Similarity=0.454 Sum_probs=23.0
Q ss_pred HHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 15 KALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..+.+.|+|.++|+++++++ +|+++.
T Consensus 120 ~~~~~~~~v~~~P~~~lid~---~G~i~~ 145 (165)
T 3ha9_A 120 GSLVEKFNVRSIDYIVIMDK---SSNVLY 145 (165)
T ss_dssp SHHHHHTTCCSSSEEEEEET---TCCEEE
T ss_pred HHHHHHhCCCCceEEEEEcC---CCcEEE
Confidence 47899999999999999997 888865
No 453
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=63.14 E-value=1.1 Score=33.93 Aligned_cols=26 Identities=23% Similarity=0.566 Sum_probs=21.4
Q ss_pred HHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 13 TKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
....++++|+|.++|+++++. +|+.+
T Consensus 82 ~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 107 (128)
T 2o8v_B 82 QNPGTAPKYGIRGIPTLLLFK----NGEVA 107 (128)
T ss_dssp TCCTTSGGGTCCSSSEEEEEE----TTEEE
T ss_pred CCHHHHHHcCCCccCEEEEEe----CCEEE
Confidence 345789999999999999994 78764
No 454
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=62.98 E-value=4.4 Score=30.57 Aligned_cols=24 Identities=25% Similarity=0.355 Sum_probs=21.7
Q ss_pred HHhhcccCCCCeeEEecCCCCCCceee
Q 021505 17 LNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 17 l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
+.+.|+|.++|+++++++ +|+++.
T Consensus 103 ~~~~~~i~~~P~~~lid~---~G~i~~ 126 (148)
T 3hcz_A 103 FKITYDIYATPVLYVLDK---NKVIIA 126 (148)
T ss_dssp HHHHHCCCSSCEEEEECT---TCBEEE
T ss_pred HHHhcCcCCCCEEEEECC---CCcEEE
Confidence 899999999999999997 888764
No 455
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=62.54 E-value=1 Score=36.30 Aligned_cols=28 Identities=4% Similarity=0.189 Sum_probs=22.7
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+....++.+|+|.++||++++. +|+.+
T Consensus 81 VDe~~e~a~~y~V~siPT~~fFk----~G~~v 108 (160)
T 2av4_A 81 ITEVPDFNTMYELYDPVSVMFFY----RNKHM 108 (160)
T ss_dssp TTTCCTTTTTTTCCSSEEEEEEE----TTEEE
T ss_pred CCCCHHHHHHcCCCCCCEEEEEE----CCEEE
Confidence 34567899999999999999887 56664
No 456
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=62.02 E-value=3.9 Score=32.31 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=20.1
Q ss_pred HhhcccCCCCeeEEecCCCCCCceee
Q 021505 18 NRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 18 ~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
.++|+|.++|+++++++ +|+++.
T Consensus 123 ~~~~~v~~~Pt~~lid~---~G~~~~ 145 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDN---EGNPLN 145 (172)
T ss_dssp HHHHSCCCSSEEEEECT---TSCBSS
T ss_pred HHHcCCCCcceEEEECC---CCCEEe
Confidence 58999999999999987 887753
No 457
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=61.97 E-value=6.4 Score=30.85 Aligned_cols=22 Identities=27% Similarity=0.579 Sum_probs=19.2
Q ss_pred CHHHHHHHHhhcccCCCCeeEE
Q 021505 10 DLETKKALNRKFDIEGIPCLVV 31 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P~l~~ 31 (311)
..+.+.+++++++|+|+||+++
T Consensus 94 ~v~~~~~la~~~gI~gtPt~vi 115 (147)
T 3gv1_A 94 PVAETTSLGEQFGFNGTPTLVF 115 (147)
T ss_dssp SHHHHHHHHHHTTCCSSCEEEC
T ss_pred HHHHHHHHHHHhCCCccCEEEE
Confidence 3456788999999999999998
No 458
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=61.54 E-value=1.7 Score=34.97 Aligned_cols=11 Identities=18% Similarity=0.057 Sum_probs=9.9
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|+.||++|.
T Consensus 55 ~F~atwC~~C~ 65 (181)
T 2p31_A 55 VNVASECGFTD 65 (181)
T ss_dssp EEECSSSTTHH
T ss_pred EEeccCCCCcH
Confidence 79999999995
No 459
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=61.47 E-value=1.7 Score=43.11 Aligned_cols=36 Identities=31% Similarity=0.721 Sum_probs=0.0
Q ss_pred CCCcccccccCCCcc---eeEeCCCCCCCcccccccccc
Q 021505 269 GGPFICCDCDEQGSG---WAYQCLECGYEVHPKCVRAVD 304 (311)
Q Consensus 269 ~~~~~Cd~C~~~g~~---w~~~C~~c~~~~h~~c~~~~~ 304 (311)
..+-+|++|+...-| --|.|..|+|-.|.+|...+.
T Consensus 46 ~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~ 84 (674)
T 3pfq_A 46 KQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVT 84 (674)
T ss_dssp ---------------------------------------
T ss_pred CCCCccccccccccccCCceeECCCCCCCcChhhcCcCc
Confidence 457789999997543 378999999999999987643
No 460
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=61.35 E-value=1 Score=32.91 Aligned_cols=24 Identities=17% Similarity=0.560 Sum_probs=19.7
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCce
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDA 41 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~ 41 (311)
...++++|+|.++|+++++. +|+.
T Consensus 70 ~~~~~~~~~v~~~Pt~~~~~----~g~~ 93 (120)
T 1mek_A 70 ESDLAQQYGVRGYPTIKFFR----NGDT 93 (120)
T ss_dssp CCSSHHHHTCCSSSEEEEEE----SSCS
T ss_pred CHHHHHHCCCCcccEEEEEe----CCCc
Confidence 35688999999999999995 5654
No 461
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=61.09 E-value=7.4 Score=33.26 Aligned_cols=23 Identities=13% Similarity=0.413 Sum_probs=19.9
Q ss_pred HHHHHHHHhhcccC--CCCeeEEec
Q 021505 11 LETKKALNRKFDIE--GIPCLVVLQ 33 (311)
Q Consensus 11 ~~~~~~l~~~~~i~--~~P~l~~~~ 33 (311)
++.+..|+++|+|+ ++||++++.
T Consensus 67 ~~~~~~l~~~~~V~~~~~PTl~~f~ 91 (240)
T 2qc7_A 67 DKLNMELSEKYKLDKESYPVFYLFR 91 (240)
T ss_dssp SCCSHHHHHHTTCCGGGCSEEEEEE
T ss_pred chhhHHHHHHcCCCCCCCCEEEEEe
Confidence 33468899999999 999999986
No 462
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=60.86 E-value=3.3 Score=34.15 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=21.6
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCce
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDA 41 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~ 41 (311)
+....++++|+|.++|+++++. +|+.
T Consensus 155 ~~~~~l~~~~~v~~~Pt~~~~~----~G~~ 180 (210)
T 3apq_A 155 GDDRMLCRMKGVNSYPSLFIFR----SGMA 180 (210)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEC----TTSC
T ss_pred CccHHHHHHcCCCcCCeEEEEE----CCCc
Confidence 3457899999999999999995 6765
No 463
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=60.80 E-value=4.9 Score=30.63 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=22.6
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+.+.|+|.++|+++++++ +|+++
T Consensus 95 ~~~~~~~~~i~~~P~~~lid~---~G~i~ 120 (153)
T 2l5o_A 95 DKAVGQAFGTQVYPTSVLIGK---KGEIL 120 (153)
T ss_dssp SCHHHHHHTCCSSSEEEEECS---SSCCC
T ss_pred hHHHHHHcCCCccCeEEEECC---CCcEE
Confidence 357899999999999999997 88774
No 464
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=60.45 E-value=2.1 Score=29.16 Aligned_cols=20 Identities=5% Similarity=0.356 Sum_probs=17.1
Q ss_pred HHHHHHHhhcccCCCCeeEE
Q 021505 12 ETKKALNRKFDIEGIPCLVV 31 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~ 31 (311)
+.+..++++|+|.++|++++
T Consensus 42 ~~~~~~~~~~~v~~~Pt~~~ 61 (85)
T 1nho_A 42 MVDREKAIEYGLMAVPAIAI 61 (85)
T ss_dssp TTCGGGGGGTCSSCSSEEEE
T ss_pred CCCHHHHHhCCceeeCEEEE
Confidence 34467899999999999998
No 465
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=60.14 E-value=5 Score=30.22 Aligned_cols=23 Identities=22% Similarity=0.495 Sum_probs=20.0
Q ss_pred HhhcccCCCCeeEEecCCCCCCceee
Q 021505 18 NRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 18 ~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
.+.|+|.++|+++++++ +|+++.
T Consensus 102 ~~~~~v~~~P~~~lid~---~G~i~~ 124 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDG---RKRVIL 124 (142)
T ss_dssp TTCSCCCSSSEEEEECT---TCBEEE
T ss_pred HHHcCCCCCCeEEEECC---CCCEEe
Confidence 44999999999999997 898864
No 466
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=60.01 E-value=2.6 Score=35.12 Aligned_cols=23 Identities=9% Similarity=-0.257 Sum_probs=15.7
Q ss_pred eeeecCCCCCCcccccccCCCcceeEeCCCC
Q 021505 261 NLVSEGTGGGPFICCDCDEQGSGWAYQCLEC 291 (311)
Q Consensus 261 ~~~~~~~~~~~~~Cd~C~~~g~~w~~~C~~c 291 (311)
.-.++..|+...+ .+|++||++|
T Consensus 31 v~Ls~~kGKvvll--------~F~At~C~~c 53 (207)
T 2r37_A 31 IPFKQYAGKYVLF--------VNVASYGGLT 53 (207)
T ss_dssp EEGGGGTTSEEEE--------EEECSSSTTT
T ss_pred EcHHHhCCCEEEE--------EEeCCCCCCh
Confidence 3334445554445 7899999999
No 467
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=59.08 E-value=6.8 Score=30.21 Aligned_cols=31 Identities=13% Similarity=0.219 Sum_probs=25.8
Q ss_pred CHHHHHHHHhhcccCCCC---------------eeEEecCCCCCCceee
Q 021505 10 DLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATL 43 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P---------------~l~~~~~~~~~g~~~~ 43 (311)
+.+...++.+.|+|.++| +++++++ +|+++.
T Consensus 96 ~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~ 141 (164)
T 2ggt_A 96 TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP---DGEFLD 141 (164)
T ss_dssp CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT---TSCEEE
T ss_pred CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC---CCeEEE
Confidence 456667899999999999 8899997 898864
No 468
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=59.07 E-value=2.1 Score=34.54 Aligned_cols=11 Identities=18% Similarity=-0.118 Sum_probs=9.8
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|+.||++|.
T Consensus 55 ~F~atwC~~C~ 65 (185)
T 2gs3_A 55 TNVASQGGKTE 65 (185)
T ss_dssp EEECSSSTTHH
T ss_pred EEecCCCCchH
Confidence 79999999994
No 469
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=58.96 E-value=2.3 Score=34.44 Aligned_cols=10 Identities=20% Similarity=0.062 Sum_probs=9.3
Q ss_pred cceeEeCCCC
Q 021505 282 SGWAYQCLEC 291 (311)
Q Consensus 282 ~~w~~~C~~c 291 (311)
.+|+.||++|
T Consensus 54 ~F~atwC~~C 63 (190)
T 2vup_A 54 YNVASKCGYT 63 (190)
T ss_dssp EEECSSSTTH
T ss_pred EEecCCCCcc
Confidence 7899999999
No 470
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=58.78 E-value=7 Score=29.77 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=23.0
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
...+++.|+|.++|+++++++ +|+++.
T Consensus 106 ~~~~~~~~~v~~~P~~~~id~---~G~i~~ 132 (156)
T 1kng_A 106 NGRASIEWGVYGVPETFVVGR---EGTIVY 132 (156)
T ss_dssp TSHHHHHTTCCSSCEEEEECT---TSBEEE
T ss_pred hhHHHHhcCcCccCeEEEEcC---CCCEEE
Confidence 457899999999999999987 887753
No 471
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=58.16 E-value=4.8 Score=30.50 Aligned_cols=24 Identities=13% Similarity=0.313 Sum_probs=20.0
Q ss_pred CHHHHHHHHhhcccCC--CCeeEEec
Q 021505 10 DLETKKALNRKFDIEG--IPCLVVLQ 33 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~--~P~l~~~~ 33 (311)
|.+...+++.+|+|++ +|+++++.
T Consensus 61 d~d~~~~~a~~~gi~~~~iPtl~i~~ 86 (133)
T 2djk_A 61 DAKAFGAHAGNLNLKTDKFPAFAIQE 86 (133)
T ss_dssp CTTTTGGGTTTTTCCSSSSSEEEEEC
T ss_pred chHHhHHHHHHcCCCcccCCEEEEEe
Confidence 4445567999999999 99999987
No 472
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=58.04 E-value=1.6 Score=32.48 Aligned_cols=28 Identities=14% Similarity=0.522 Sum_probs=21.8
Q ss_pred HHHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 11 LETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 11 ~~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
.+.+..++++|+|.++|+++++. +|+.+
T Consensus 75 ~~~~~~~~~~~~v~~~Pt~~~~~----~g~~~ 102 (130)
T 1wmj_A 75 VDELKEVAEKYNVEAMPTFLFIK----DGAEA 102 (130)
T ss_dssp TTTSGGGHHHHTCCSSCCCCBCT----TTTCC
T ss_pred ccchHHHHHHcCCCccceEEEEe----CCeEE
Confidence 33456799999999999998885 67654
No 473
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=57.54 E-value=5 Score=30.16 Aligned_cols=26 Identities=8% Similarity=0.190 Sum_probs=21.9
Q ss_pred HHHHhhcccCC-CCeeEEecCCCCCCceeec
Q 021505 15 KALNRKFDIEG-IPCLVVLQPYDDKDDATLH 44 (311)
Q Consensus 15 ~~l~~~~~i~~-~P~l~~~~~~~~~g~~~~~ 44 (311)
..++.+|+|.+ .|+++++. +|+.+-+
T Consensus 70 n~IA~~~~V~h~sPq~il~k----~G~~v~~ 96 (112)
T 3iv4_A 70 DYIAKKTNVKHESPQAFYFV----NGEMVWN 96 (112)
T ss_dssp HHHHHHHTCCCCSSEEEEEE----TTEEEEE
T ss_pred HHHHHHhCCccCCCeEEEEE----CCEEEEE
Confidence 35899999996 99999998 7887744
No 474
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=57.52 E-value=15 Score=31.13 Aligned_cols=56 Identities=11% Similarity=0.276 Sum_probs=38.5
Q ss_pred CEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHHHH
Q 021505 110 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 189 (311)
Q Consensus 110 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 189 (311)
++++|-|+.+|| ......+.++++.+++ ++.+..++ +..++
T Consensus 25 ~v~vvgff~~~~---~~~~~~f~~~A~~lr~----------~~~F~~~~--------------------------~~~v~ 65 (252)
T 2h8l_A 25 DASIVGFFDDSF---SEAHSEFLKAASNLRD----------NYRFAHTN--------------------------VESLV 65 (252)
T ss_dssp SCEEEEEESCTT---SHHHHHHHHHHHHTTT----------TSCEEEEC--------------------------CHHHH
T ss_pred CeEEEEEECCCC---ChHHHHHHHHHHhccc----------CcEEEEEC--------------------------hHHHH
Confidence 567777888874 4456677777887754 34444442 23688
Q ss_pred HhCCCCccceEEEECC
Q 021505 190 KYFDVQGIPCLVIIGP 205 (311)
Q Consensus 190 ~~~~v~~~Pt~vlid~ 205 (311)
+.|++.. |+++++-+
T Consensus 66 ~~~~~~~-p~i~~fk~ 80 (252)
T 2h8l_A 66 NEYDDNG-EGIILFRP 80 (252)
T ss_dssp HHHCSSS-EEEEEECC
T ss_pred HHhCCCC-CcEEEEcc
Confidence 8999997 99998853
No 475
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=56.90 E-value=6.6 Score=29.91 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=22.5
Q ss_pred HHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 15 KALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
..+.+.|+|.++|+++++++ +|+++.
T Consensus 96 ~~~~~~~~v~~~P~~~lid~---~G~i~~ 121 (154)
T 3kcm_A 96 KRVGKLYGTTGVPETFVIDR---HGVILK 121 (154)
T ss_dssp CHHHHHHTCCSBCEEEEECT---TSBEEE
T ss_pred hHHHHHhCCCCCCeEEEECC---CCcEEE
Confidence 45899999999999999997 888753
No 476
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=56.85 E-value=1.5 Score=32.90 Aligned_cols=23 Identities=17% Similarity=0.472 Sum_probs=18.7
Q ss_pred HHHHHHHhhcccCCCCeeEEecC
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
+.+..++++|+|.++|++++++.
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~~~ 90 (133)
T 2dj3_A 68 TANDITNDQYKVEGFPTIYFAPS 90 (133)
T ss_dssp TTSCCCCSSCCCSSSSEEEEECT
T ss_pred CcCHHHHhhcCCCcCCEEEEEeC
Confidence 33456778999999999999984
No 477
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=56.83 E-value=14 Score=30.22 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=31.0
Q ss_pred EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 111 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 111 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
..|.+|+-.-||+|-...+.|.++.+++.. +++|.....
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~----------~v~v~~~p~ 41 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG----------VIQFEYVVG 41 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT----------TSEEEEEEC
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC----------CceEEEEec
Confidence 356777789999999999999999988753 467766654
No 478
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=56.72 E-value=5.3 Score=26.50 Aligned_cols=18 Identities=17% Similarity=0.206 Sum_probs=16.1
Q ss_pred HHHHHhhcccCCCCeeEE
Q 021505 14 KKALNRKFDIEGIPCLVV 31 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~ 31 (311)
+.+++++|+|.++|++++
T Consensus 39 ~~~~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 39 EMDQILEAGLTALPGLAV 56 (77)
T ss_dssp SHHHHHHHTCSSSSCEEE
T ss_pred CHHHHHHCCCCcCCEEEE
Confidence 357899999999999998
No 479
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=56.51 E-value=18 Score=29.43 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=28.3
Q ss_pred EEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEec
Q 021505 111 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 159 (311)
Q Consensus 111 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~ 159 (311)
+.|.+|+-.-||+|....+.+.++.+ +.+. +++|.....
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~---------~v~v~~~~~ 46 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSA---------FLTVKIMPG 46 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTT---------TCEEEEEEC
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCC---------CeEEEEeec
Confidence 45677778899999988888888777 4332 466766654
No 480
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=56.18 E-value=5.2 Score=30.27 Aligned_cols=86 Identities=14% Similarity=0.234 Sum_probs=48.4
Q ss_pred CEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC--CHHHHHHHHhcCCCcccccCchhHHH
Q 021505 110 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR--DQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 110 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~--~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
|.++|.|.-|-|+.|......|.++.+ ...++-|++=. +.+...+-+..+. .......
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~led--------------eY~ilrVNIlSfFsK~g~v~~lg~~~------~y~lInn 61 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKS--------------EYDILHVDILSFFLKDGDSSMLGDVK------RGTLIGN 61 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTT--------------TEEEEEEECCCCCCCTTGGGC-----------CCTHHHH
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhc--------------cccEEEEEeeeeeccCCceeeeeccc------hhhhHHH
Confidence 678999999999999988777744433 46688887521 0000000000000 0111345
Q ss_pred HHHhCCCCccceEEEECC-CCcEEEeccch
Q 021505 188 LTKYFDVQGIPCLVIIGP-EGKTVTKQGRN 216 (311)
Q Consensus 188 l~~~~~v~~~Pt~vlid~-~G~iv~~~g~~ 216 (311)
+.+.++ ..+-.++=.|+ .|++...+-+.
T Consensus 62 ~~~~l~-ne~v~lfKydp~s~qmA~V~i~k 90 (124)
T 2g2q_A 62 FAAHLS-NYIVSIFKYNPQTKQMAFVDINK 90 (124)
T ss_dssp HHHHGG-GGCEEEEEEETTTTEEEECCCGG
T ss_pred HHHhhc-ccEEEEEEEcCCCCcEEEEehhH
Confidence 667777 44456666775 67777765443
No 481
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=56.14 E-value=4.2 Score=31.90 Aligned_cols=12 Identities=17% Similarity=0.080 Sum_probs=10.5
Q ss_pred cceeEeCC-CCCC
Q 021505 282 SGWAYQCL-ECGY 293 (311)
Q Consensus 282 ~~w~~~C~-~c~~ 293 (311)
.+|+.||+ +|.-
T Consensus 39 ~f~~~~C~~~C~~ 51 (174)
T 1xzo_A 39 DFIFTNCETICPP 51 (174)
T ss_dssp EEECSCCSSCCCS
T ss_pred EEEcCCCcchhHH
Confidence 79999999 9964
No 482
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=55.58 E-value=6.1 Score=28.86 Aligned_cols=19 Identities=11% Similarity=0.202 Sum_probs=16.5
Q ss_pred HHHHHHhhcccCCCCeeEE
Q 021505 13 TKKALNRKFDIEGIPCLVV 31 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~ 31 (311)
....|+++|+|+++||+++
T Consensus 54 ~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII 72 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE
T ss_pred hhHHHHHHcCCeEeCEEEE
Confidence 3568999999999999877
No 483
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=54.51 E-value=7.8 Score=30.12 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=22.7
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
...+++.|+|.++|+++++++ +|+++
T Consensus 114 ~~~~~~~~~v~~~P~~~lid~---~G~i~ 139 (168)
T 2b1k_A 114 DGMLGLDLGVYGAPETFLIDG---NGIIR 139 (168)
T ss_dssp TCHHHHHHTCCSSSEEEEECT---TSBEE
T ss_pred chHHHHHcCccccCEEEEECC---CCeEE
Confidence 467999999999999999997 88875
No 484
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=54.08 E-value=2.8 Score=35.19 Aligned_cols=11 Identities=18% Similarity=-0.000 Sum_probs=10.1
Q ss_pred cceeEeCCCCC
Q 021505 282 SGWAYQCLECG 292 (311)
Q Consensus 282 ~~w~~~C~~c~ 292 (311)
.+|++||++|.
T Consensus 62 ~FwAt~C~~c~ 72 (215)
T 2i3y_A 62 VNVATYCGLTA 72 (215)
T ss_dssp EEECSSSGGGG
T ss_pred EEeCCCCCChH
Confidence 78999999995
No 485
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=53.76 E-value=16 Score=30.98 Aligned_cols=19 Identities=21% Similarity=0.375 Sum_probs=14.8
Q ss_pred HHHHhhcccCCCCeeEEecC
Q 021505 15 KALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 15 ~~l~~~~~i~~~P~l~~~~~ 34 (311)
..++.+|++++ |+++++.+
T Consensus 63 ~~v~~~~~v~~-p~ivlfk~ 81 (250)
T 3ec3_A 63 TEIAKFLKVSL-GKLVLMQP 81 (250)
T ss_dssp HHHHHHHTCCS-SEEEEECC
T ss_pred HHHHHHcCCCC-CeEEEEec
Confidence 46777888887 98888864
No 486
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=53.29 E-value=12 Score=27.67 Aligned_cols=22 Identities=9% Similarity=0.404 Sum_probs=18.9
Q ss_pred HHHHHHhhcccCCCCeeEEecC
Q 021505 13 TKKALNRKFDIEGIPCLVVLQP 34 (311)
Q Consensus 13 ~~~~l~~~~~i~~~P~l~~~~~ 34 (311)
....++++|+|.++|+++++..
T Consensus 80 ~~~~~~~~~~i~~~Pt~~~~~~ 101 (123)
T 1wou_A 80 PNNDFRKNLKVTAVPTLLKYGT 101 (123)
T ss_dssp TTCHHHHHHCCCSSSEEEETTS
T ss_pred hhHHHHHHCCCCeeCEEEEEcC
Confidence 3467889999999999999984
No 487
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=52.74 E-value=4.4 Score=31.72 Aligned_cols=14 Identities=21% Similarity=0.171 Sum_probs=7.9
Q ss_pred cce-eEeCCCCCCCc
Q 021505 282 SGW-AYQCLECGYEV 295 (311)
Q Consensus 282 ~~w-~~~C~~c~~~~ 295 (311)
.+| +.||++|.-.+
T Consensus 36 ~f~~~~~c~~C~~e~ 50 (157)
T 4g2e_A 36 AFYPAAFTQVCTKEM 50 (157)
T ss_dssp EECSCTTCCC-----
T ss_pred EecCCCCCCccccch
Confidence 677 99999997554
No 488
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=52.29 E-value=7.4 Score=25.65 Aligned_cols=33 Identities=24% Similarity=0.511 Sum_probs=25.4
Q ss_pred CCcccccccCC-CcceeEeCCCCC--------CCcccccccc
Q 021505 270 GPFICCDCDEQ-GSGWAYQCLECG--------YEVHPKCVRA 302 (311)
Q Consensus 270 ~~~~Cd~C~~~-g~~w~~~C~~c~--------~~~h~~c~~~ 302 (311)
.+..|..|.+. -....|.|+.|+ |..|..|...
T Consensus 10 ~~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk~Cse~ 51 (59)
T 1x4s_A 10 PAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGTCAEN 51 (59)
T ss_dssp CCEEECSSCTTCCEEECEECTTTCCEESSHHHHHHHCCGGGG
T ss_pred CCCcCcCCCCCcCCCccccCcCCCCCccChHHHHHHhHhCHH
Confidence 34589999874 478899999997 5677777755
No 489
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=51.92 E-value=41 Score=26.94 Aligned_cols=23 Identities=26% Similarity=0.514 Sum_probs=17.8
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
.....+.+||.++|+++| +|+.+
T Consensus 134 ~~~~a~~~gv~GtPt~~v---ng~~~ 156 (189)
T 3l9v_A 134 QERLFKEYGVRGTPSVYV---RGRYH 156 (189)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTTEE
T ss_pred HHHHHHHhCCCccCEEEE---CCEEE
Confidence 446778899999999886 46644
No 490
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=51.28 E-value=30 Score=25.90 Aligned_cols=46 Identities=4% Similarity=0.036 Sum_probs=28.6
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CHHHHHHHHhcCC
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQTSFESYFGTMP 174 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~~~~~~~~~~~~ 174 (311)
+..|..++|+.|++....|.+ + ++.+-.+.+.. +.+++.+++...+
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~---------gi~~~~~di~~~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------Q---------GITPQVVLYLETPPSVDKLKELLQQLG 55 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------T---------TCCCEEECTTTSCCCHHHHHHHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHH-------c---------CCCcEEEeeccCCCcHHHHHHHHHhcC
Confidence 345668999999988766542 2 45555666543 4555555555444
No 491
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=51.27 E-value=2.9 Score=34.90 Aligned_cols=27 Identities=22% Similarity=0.578 Sum_probs=22.1
Q ss_pred HHHHHHHhhcccCCCCeeEEecCCCCCCcee
Q 021505 12 ETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 42 (311)
Q Consensus 12 ~~~~~l~~~~~i~~~P~l~~~~~~~~~g~~~ 42 (311)
+....++++|+|.++|+++++. +|+.+
T Consensus 71 d~~~~l~~~~~v~~~Pt~~~~~----~G~~~ 97 (222)
T 3dxb_A 71 DQNPGTAPKYGIRGIPTLLLFK----NGEVA 97 (222)
T ss_dssp TTCTTTGGGGTCCSBSEEEEEE----TTEEE
T ss_pred CCCHHHHHHcCCCcCCEEEEEE----CCeEE
Confidence 3456789999999999999996 67664
No 492
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=50.88 E-value=54 Score=24.43 Aligned_cols=44 Identities=7% Similarity=0.234 Sum_probs=27.3
Q ss_pred EEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCC---CHHHHHHHHhc
Q 021505 113 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQTSFESYFGT 172 (311)
Q Consensus 113 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~---~~~~~~~~~~~ 172 (311)
+..|..++|+.|++....|.+ + ++.+-.+.+.. +.+++.+.+..
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-------~---------gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-------L---------AWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------H---------TCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH-------c---------CCceEEEEeccCchhHHHHHHHHHH
Confidence 445678999999988776642 2 45566666543 34555555543
No 493
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=50.24 E-value=9.8 Score=30.17 Aligned_cols=27 Identities=11% Similarity=0.163 Sum_probs=23.3
Q ss_pred HHHHHhhcccCCCCeeEEecCCCCCCceee
Q 021505 14 KKALNRKFDIEGIPCLVVLQPYDDKDDATL 43 (311)
Q Consensus 14 ~~~l~~~~~i~~~P~l~~~~~~~~~g~~~~ 43 (311)
...+.+.|+|.++|+++++++ +|+++.
T Consensus 121 ~~~~~~~~~v~~~P~~~lid~---~G~i~~ 147 (176)
T 3kh7_A 121 DGTLGLDLGVYGAPETYLIDK---QGIIRH 147 (176)
T ss_dssp TCHHHHHHTCCSSCEEEEECT---TCBEEE
T ss_pred cchHHHHcCCCCCCeEEEECC---CCeEEE
Confidence 457899999999999999997 888753
No 494
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=50.07 E-value=22 Score=29.03 Aligned_cols=22 Identities=18% Similarity=0.433 Sum_probs=17.6
Q ss_pred HHHHHHhCCCCccceEEEECCCCcE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
...+.+.+||.++|+++| +|+.
T Consensus 152 ~~~~a~~~gV~gtPtfvv---nG~~ 173 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV---NDKV 173 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE---TTEE
T ss_pred HHHHHHHcCCCcCCEEEE---CCEE
Confidence 446778899999999987 5665
No 495
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=49.97 E-value=7.5 Score=26.02 Aligned_cols=26 Identities=31% Similarity=0.790 Sum_probs=20.0
Q ss_pred CCcccccccCCCc---ceeEeCCCCCCCc
Q 021505 270 GPFICCDCDEQGS---GWAYQCLECGYEV 295 (311)
Q Consensus 270 ~~~~Cd~C~~~g~---~w~~~C~~c~~~~ 295 (311)
-.|.|..|+..-. .=.-+|+.|+|.+
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 4689999988654 3467899999875
No 496
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=49.70 E-value=21 Score=28.91 Aligned_cols=23 Identities=22% Similarity=0.511 Sum_probs=17.7
Q ss_pred HHHHHHhCCCCccceEEEECCCCcEE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKTV 210 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~iv 210 (311)
....++.+||.++|+++| +|+.+
T Consensus 140 ~~~~a~~~gv~gtPtfvv---nG~~~ 162 (191)
T 3l9s_A 140 QEKAAADLQLQGVPAMFV---NGKYQ 162 (191)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTTEE
T ss_pred HHHHHHHhCCcccCEEEE---CCEEE
Confidence 446778999999999886 46644
No 497
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=49.60 E-value=15 Score=28.43 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=24.7
Q ss_pred CHHHHHHHHhhcccCCCC---------------eeEEecCCCCCCceee
Q 021505 10 DLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATL 43 (311)
Q Consensus 10 d~~~~~~l~~~~~i~~~P---------------~l~~~~~~~~~g~~~~ 43 (311)
+.+...++.+.|+|.++| +++++++ +|+++.
T Consensus 99 ~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~ 144 (171)
T 2rli_A 99 STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP---DGLFTD 144 (171)
T ss_dssp CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT---TSCEEE
T ss_pred CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC---CCeEEE
Confidence 344556899999999888 8899997 888764
No 498
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=49.36 E-value=4.6 Score=34.83 Aligned_cols=20 Identities=20% Similarity=0.698 Sum_probs=18.3
Q ss_pred HHHHHhhcccC--CCCeeEEec
Q 021505 14 KKALNRKFDIE--GIPCLVVLQ 33 (311)
Q Consensus 14 ~~~l~~~~~i~--~~P~l~~~~ 33 (311)
+..|+++|+|+ ++||++++.
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~ 103 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK 103 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES
T ss_pred cHHHHHHhCCCcCCCCeEEEEe
Confidence 57899999999 999999885
No 499
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=47.27 E-value=8.3 Score=28.58 Aligned_cols=63 Identities=13% Similarity=0.080 Sum_probs=45.0
Q ss_pred CCCEEEEEEecCCChhhHhhhHHHHHHHHHHHhhhhhcCCCCCCeEEEEEecCCCHHHHHHHHhcCCCcccccCchhHHH
Q 021505 108 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 187 (311)
Q Consensus 108 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~Vs~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 187 (311)
..+++|..|-+...+.+.+.+..+.++.+++... .+++=.|.+-..+ +
T Consensus 5 ~~~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~---------~y~LeVIDv~~~P-----------------------e 52 (105)
T 1wwj_A 5 KKTYVLKLYVAGNTPNSVRALKMLKNILEQEFQG---------VYALKVIDVLKNP-----------------------Q 52 (105)
T ss_dssp CEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTT---------SEEEEEEETTTCC-----------------------S
T ss_pred cCceEEEEEEeCCCchHHHHHHHHHHHHHHhcCC---------CeEEEEEEcccCH-----------------------h
Confidence 3457888888888899999999999988877642 5666666554432 5
Q ss_pred HHHhCCCCccceEEE
Q 021505 188 LTKYFDVQGIPCLVI 202 (311)
Q Consensus 188 l~~~~~v~~~Pt~vl 202 (311)
+++.++|.++||++=
T Consensus 53 lAe~~~IvAtPTLiK 67 (105)
T 1wwj_A 53 LAEEDKILATPTLAK 67 (105)
T ss_dssp CCTTCEEECHHHHGG
T ss_pred HHhHCCeEEechhhh
Confidence 566777777777653
No 500
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=47.25 E-value=12 Score=29.86 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=17.5
Q ss_pred HHHHHHhCCCCccceEEEECCCCcE
Q 021505 185 IKELTKYFDVQGIPCLVIIGPEGKT 209 (311)
Q Consensus 185 ~~~l~~~~~v~~~Pt~vlid~~G~i 209 (311)
+..+.+.+||.++||++| +|+.
T Consensus 138 ~~~~a~~~gv~GtPt~vv---nG~~ 159 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI---NGEK 159 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTEE
T ss_pred HHHHHHHcCCCCCCeEEE---CCEE
Confidence 346788899999999887 5664
Done!