Query 021513
Match_columns 311
No_of_seqs 260 out of 1669
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:35:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021513.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021513hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 1.5E-86 3.2E-91 575.6 26.6 295 16-310 59-359 (369)
2 PLN03158 methionine aminopepti 100.0 9E-75 2E-79 542.6 33.5 290 21-310 85-380 (396)
3 COG0024 Map Methionine aminope 100.0 2.4E-63 5.2E-68 435.4 28.5 244 67-310 4-251 (255)
4 PRK12897 methionine aminopepti 100.0 9.2E-60 2E-64 420.6 29.4 246 66-311 2-248 (248)
5 PRK07281 methionine aminopepti 100.0 2.2E-59 4.9E-64 423.5 29.7 246 66-311 2-280 (286)
6 PRK12318 methionine aminopepti 100.0 1.2E-58 2.7E-63 420.8 33.1 249 63-311 37-289 (291)
7 PRK12896 methionine aminopepti 100.0 9E-58 1.9E-62 409.6 30.4 247 64-310 6-254 (255)
8 TIGR00500 met_pdase_I methioni 100.0 3.8E-57 8.3E-62 403.7 30.5 244 67-310 2-246 (247)
9 PRK05716 methionine aminopepti 100.0 1E-56 2.3E-61 402.0 30.0 246 66-311 3-249 (252)
10 cd01086 MetAP1 Methionine Amin 100.0 7.1E-53 1.5E-57 374.1 28.9 237 74-310 1-238 (238)
11 PRK09795 aminopeptidase; Provi 100.0 1.3E-52 2.8E-57 393.9 26.4 225 62-311 121-351 (361)
12 COG0006 PepP Xaa-Pro aminopept 100.0 4.3E-51 9.4E-56 386.6 23.9 230 56-310 142-375 (384)
13 PRK15173 peptidase; Provisiona 100.0 1.4E-50 3.1E-55 373.7 25.3 230 56-311 83-315 (323)
14 PRK10879 proline aminopeptidas 100.0 1.5E-50 3.2E-55 387.4 25.2 238 57-310 162-419 (438)
15 PRK14575 putative peptidase; P 100.0 8.6E-50 1.9E-54 379.4 25.4 231 55-311 165-398 (406)
16 cd01090 Creatinase Creatine am 100.0 2.2E-49 4.8E-54 349.1 26.2 224 74-310 1-228 (228)
17 TIGR02993 ectoine_eutD ectoine 100.0 4.9E-50 1.1E-54 379.7 22.9 233 56-311 146-383 (391)
18 cd01087 Prolidase Prolidase. E 100.0 3.1E-49 6.8E-54 351.8 25.5 223 74-310 1-243 (243)
19 PRK14576 putative endopeptidas 100.0 4.3E-49 9.3E-54 374.5 25.4 230 56-311 165-397 (405)
20 PRK13607 proline dipeptidase; 100.0 1.4E-47 3.1E-52 366.3 20.6 248 56-310 149-438 (443)
21 TIGR00495 crvDNA_42K 42K curve 100.0 9.4E-46 2E-50 347.5 28.5 244 66-310 11-336 (389)
22 cd01092 APP-like Similar to Pr 100.0 3.2E-45 6.9E-50 318.1 25.7 207 74-305 1-208 (208)
23 PTZ00053 methionine aminopepti 100.0 1.4E-44 3.1E-49 341.7 28.4 263 39-310 112-466 (470)
24 cd01085 APP X-Prolyl Aminopept 100.0 2.1E-44 4.5E-49 316.3 24.2 209 75-307 5-221 (224)
25 PRK08671 methionine aminopepti 100.0 4.1E-43 8.9E-48 319.6 27.7 227 73-310 1-291 (291)
26 PF00557 Peptidase_M24: Metall 100.0 2.2E-43 4.7E-48 306.7 22.6 204 75-302 1-207 (207)
27 cd01091 CDC68-like Related to 100.0 7.2E-43 1.6E-47 309.8 22.9 226 74-310 1-243 (243)
28 TIGR00501 met_pdase_II methion 100.0 2.2E-42 4.7E-47 315.1 26.4 229 71-310 2-295 (295)
29 cd01089 PA2G4-like Related to 100.0 1.7E-42 3.6E-47 305.6 24.3 216 74-310 1-228 (228)
30 cd01088 MetAP2 Methionine Amin 100.0 5.9E-42 1.3E-46 312.0 26.7 226 74-310 1-291 (291)
31 cd01066 APP_MetAP A family inc 100.0 6.4E-42 1.4E-46 295.6 24.5 206 74-305 1-207 (207)
32 KOG2414 Putative Xaa-Pro amino 100.0 7.2E-43 1.6E-47 315.1 14.1 235 58-310 218-471 (488)
33 KOG2737 Putative metallopeptid 100.0 3.2E-37 6.8E-42 276.0 19.9 249 58-310 175-466 (492)
34 KOG1189 Global transcriptional 99.9 1.2E-25 2.6E-30 215.9 16.5 248 46-311 115-378 (960)
35 KOG2775 Metallopeptidase [Gene 99.9 2.1E-24 4.5E-29 188.5 16.6 233 69-310 80-393 (397)
36 KOG2413 Xaa-Pro aminopeptidase 99.9 1.5E-23 3.3E-28 198.8 17.1 226 59-306 298-537 (606)
37 KOG2776 Metallopeptidase [Gene 99.8 2.3E-19 5.1E-24 160.6 20.0 243 66-310 13-339 (398)
38 COG5406 Nucleosome binding fac 99.8 8.1E-18 1.8E-22 159.6 13.4 244 52-311 154-418 (1001)
39 PLN03158 methionine aminopepti 97.7 0.00035 7.5E-09 66.4 11.3 117 165-302 126-247 (396)
40 cd01086 MetAP1 Methionine Amin 97.7 0.00057 1.2E-08 60.4 12.0 103 181-302 2-105 (238)
41 cd01066 APP_MetAP A family inc 97.5 0.0018 3.9E-08 55.1 12.1 102 75-178 102-204 (207)
42 cd01088 MetAP2 Methionine Amin 97.5 0.0015 3.2E-08 59.8 11.4 97 181-302 2-100 (291)
43 PRK05716 methionine aminopepti 97.3 0.0031 6.8E-08 56.2 11.5 101 182-301 13-114 (252)
44 cd01092 APP-like Similar to Pr 97.3 0.0049 1.1E-07 53.0 11.9 100 75-177 103-204 (208)
45 PRK12896 methionine aminopepti 97.3 0.0034 7.4E-08 56.0 11.1 111 171-302 5-120 (255)
46 TIGR00500 met_pdase_I methioni 97.0 0.011 2.4E-07 52.5 12.1 100 76-178 117-238 (247)
47 COG0024 Map Methionine aminope 97.0 0.0092 2E-07 53.2 11.1 86 182-269 13-101 (255)
48 KOG2738 Putative methionine am 97.0 0.0044 9.6E-08 55.5 8.9 86 182-270 124-212 (369)
49 PRK15173 peptidase; Provisiona 96.9 0.012 2.6E-07 54.7 11.8 102 76-178 203-306 (323)
50 cd01091 CDC68-like Related to 96.9 0.014 3.1E-07 51.9 11.1 102 75-178 119-234 (243)
51 PRK12897 methionine aminopepti 96.8 0.012 2.6E-07 52.4 10.5 100 76-178 118-239 (248)
52 PRK14575 putative peptidase; P 96.8 0.016 3.5E-07 55.5 11.8 99 76-178 286-389 (406)
53 PRK14576 putative endopeptidas 96.8 0.018 3.9E-07 55.1 12.1 100 76-178 285-388 (405)
54 PRK08671 methionine aminopepti 96.8 0.026 5.6E-07 51.6 12.5 97 76-177 102-205 (291)
55 cd01090 Creatinase Creatine am 96.8 0.023 5E-07 50.0 11.7 100 76-178 110-220 (228)
56 PF00557 Peptidase_M24: Metall 96.7 0.021 4.5E-07 49.1 10.7 98 181-301 1-99 (207)
57 TIGR00495 crvDNA_42K 42K curve 96.7 0.024 5.3E-07 53.9 12.0 103 182-302 21-130 (389)
58 TIGR02993 ectoine_eutD ectoine 96.7 0.018 4E-07 54.9 11.1 99 76-178 271-374 (391)
59 PRK09795 aminopeptidase; Provi 96.7 0.031 6.7E-07 52.6 12.4 105 70-177 235-341 (361)
60 PRK12318 methionine aminopepti 96.6 0.024 5.3E-07 51.8 11.2 86 76-164 159-247 (291)
61 cd01087 Prolidase Prolidase. E 96.6 0.031 6.7E-07 49.5 11.2 102 76-178 104-235 (243)
62 PRK07281 methionine aminopepti 96.5 0.027 5.8E-07 51.4 10.6 85 76-163 149-237 (286)
63 TIGR00501 met_pdase_II methion 96.4 0.055 1.2E-06 49.6 12.1 96 182-302 7-104 (295)
64 cd01089 PA2G4-like Related to 96.3 0.089 1.9E-06 46.2 12.2 103 182-302 3-112 (228)
65 COG0006 PepP Xaa-Pro aminopept 95.5 0.17 3.7E-06 48.0 11.5 97 77-178 264-367 (384)
66 PTZ00053 methionine aminopepti 95.5 0.19 4.1E-06 48.8 11.6 96 183-301 161-262 (470)
67 PRK10879 proline aminopeptidas 94.6 0.46 9.9E-06 46.1 11.7 101 77-178 284-411 (438)
68 cd01085 APP X-Prolyl Aminopept 91.8 4.3 9.3E-05 35.5 12.3 95 79-177 115-215 (224)
69 PRK13607 proline dipeptidase; 90.9 1.7 3.6E-05 42.2 9.6 88 78-165 271-391 (443)
70 KOG2776 Metallopeptidase [Gene 87.0 3.8 8.2E-05 38.1 8.3 93 182-303 23-133 (398)
71 KOG2775 Metallopeptidase [Gene 73.3 53 0.0011 30.1 10.5 84 182-269 87-175 (397)
72 KOG1189 Global transcriptional 70.9 22 0.00048 36.5 8.3 101 77-178 259-368 (960)
73 cd01666 TGS_DRG_C TGS_DRG_C: 62.9 27 0.00059 24.9 5.5 52 95-157 21-73 (75)
74 PF07305 DUF1454: Protein of u 62.6 63 0.0014 27.5 8.2 74 180-266 114-187 (200)
75 PF00254 FKBP_C: FKBP-type pep 55.6 33 0.00072 24.9 5.2 52 146-206 2-60 (94)
76 PF12631 GTPase_Cys_C: Catalyt 44.5 66 0.0014 22.6 5.0 43 179-221 10-52 (73)
77 PF05184 SapB_1: Saposin-like 43.0 49 0.0011 19.7 3.6 34 80-113 3-36 (39)
78 COG5406 Nucleosome binding fac 41.5 98 0.0021 31.4 7.0 82 71-160 298-384 (1001)
79 PRK01490 tig trigger factor; P 41.3 92 0.002 30.0 7.0 45 99-167 132-176 (435)
80 TIGR00115 tig trigger factor. 35.6 1.8E+02 0.0039 27.7 8.0 56 99-178 120-180 (408)
81 PF09506 Salt_tol_Pase: Glucos 34.7 1.4E+02 0.0031 27.8 6.6 52 69-120 97-148 (381)
82 cd04938 TGS_Obg-like TGS_Obg-l 33.9 73 0.0016 22.7 3.8 47 95-157 28-74 (76)
83 TIGR02399 salt_tol_Pase glucos 33.2 1.5E+02 0.0033 27.8 6.5 52 69-120 103-154 (389)
84 KOG2611 Neurochondrin/leucine- 33.0 22 0.00047 34.8 1.2 70 151-220 583-662 (698)
85 COG0414 PanC Panthothenate syn 30.4 1.3E+02 0.0029 27.2 5.6 58 163-224 181-239 (285)
86 PF03477 ATP-cone: ATP cone do 30.3 42 0.0009 24.4 2.1 35 83-117 40-74 (90)
87 PF02829 3H: 3H domain; Inter 28.5 1.4E+02 0.0031 22.5 4.8 68 155-224 23-97 (98)
88 PF04355 SmpA_OmlA: SmpA / Oml 25.2 52 0.0011 22.7 1.8 19 90-108 7-25 (71)
89 PF06135 DUF965: Bacterial pro 24.7 61 0.0013 23.4 2.0 38 206-246 16-53 (79)
90 COG0544 Tig FKBP-type peptidyl 24.5 1.5E+02 0.0033 28.8 5.4 44 99-166 132-175 (441)
91 PRK05423 hypothetical protein; 23.9 1.2E+02 0.0026 22.8 3.4 28 87-114 44-71 (104)
92 COG5041 SKB2 Casein kinase II, 23.7 23 0.00051 30.4 -0.3 16 2-17 50-65 (242)
93 PF00249 Myb_DNA-binding: Myb- 23.4 1.5E+02 0.0032 18.6 3.6 42 69-110 4-46 (48)
94 KOG3092 Casein kinase II, beta 23.2 22 0.00047 30.3 -0.6 13 2-14 33-45 (216)
95 PF10415 FumaraseC_C: Fumarase 23.1 99 0.0021 20.6 2.7 35 76-110 10-49 (55)
96 smart00455 RBD Raf-like Ras-bi 23.0 89 0.0019 21.9 2.6 23 200-225 15-37 (70)
97 TIGR03147 cyt_nit_nrfF cytochr 22.5 1.2E+02 0.0025 24.1 3.4 29 81-109 56-84 (126)
98 PRK15443 pduE propanediol dehy 22.5 2.4E+02 0.0053 22.6 5.1 46 72-117 65-114 (138)
99 PF04363 DUF496: Protein of un 22.1 3.3E+02 0.0072 20.1 5.7 37 76-113 27-63 (95)
100 PLN02660 pantoate--beta-alanin 21.6 2.9E+02 0.0062 25.2 6.2 58 163-224 185-243 (284)
101 COG4001 Predicted metal-bindin 21.6 2.7E+02 0.0059 20.6 4.8 39 78-118 55-93 (102)
102 TIGR03516 ppisom_GldI peptidyl 20.4 2.3E+02 0.0051 23.7 5.1 53 146-207 83-141 (177)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-86 Score=575.65 Aligned_cols=295 Identities=62% Similarity=1.031 Sum_probs=280.9
Q ss_pred HHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCC----CCCCC-CcccCCHHHHHHHHHHHHHHHHHHHH
Q 021513 16 VRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARVLDA 90 (311)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~i~~p~~~~~~~~----~~l~~-~r~vKs~~EI~~~R~A~~ia~~~l~~ 90 (311)
+......+++.|.|+|+||||++||+++||++|++|+|++.+.+ +.... ...|+++++|+.||+||++++++++.
T Consensus 59 ~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~ 138 (369)
T KOG2738|consen 59 RKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDY 138 (369)
T ss_pred hhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHH
Confidence 45556678899999999999999999999999999999987432 22222 34689999999999999999999999
Q ss_pred HhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeee
Q 021513 91 AGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDT 170 (311)
Q Consensus 91 ~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~ 170 (311)
+...++||+|++||++++|++++++|+|||+|||.+||+++|+|+|+++|||+|+.|+||+||+|+||++++++|||+|+
T Consensus 139 Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDl 218 (369)
T KOG2738|consen 139 AATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDL 218 (369)
T ss_pred HhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCC-
Q 021513 171 SKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN- 249 (311)
Q Consensus 171 ~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~- 249 (311)
++||++|+++++.++|++.+++|++.||+.+|||+++++|++.|++.+.++||++++.|||||||..||..|.|+||.+
T Consensus 219 neTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n 298 (369)
T KOG2738|consen 219 NETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKN 298 (369)
T ss_pred ccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 250 ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 250 ~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
...++|++||+||||||++.|.++...|+|+||++|+||+.++|||||+|||++|+|+||+
T Consensus 299 ~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~ 359 (369)
T KOG2738|consen 299 KAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK 359 (369)
T ss_pred CCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence 4778999999999999999999999999999999999999999999999999999999995
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=9e-75 Score=542.61 Aligned_cols=290 Identities=50% Similarity=0.884 Sum_probs=275.7
Q ss_pred hccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhc
Q 021513 21 LQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL-----PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLV 95 (311)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~s~~~~~~~~i~~p~~~~~~~~-----~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i 95 (311)
..++++|+|+|+||||++||++.+|++|++|+|+..+.. ..+.+.|+|||++||+.||+|+++++++++++.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i 164 (396)
T PLN03158 85 TSKLPDFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI 164 (396)
T ss_pred cCCCCCCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 456778999999999999999999999999999976432 345667999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEE
Q 021513 96 RPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFL 175 (311)
Q Consensus 96 ~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~ 175 (311)
+||+||.||++++++++.++|++|++++|.+||+++|+|.|+++||++|++++|++||+|+||+++.++||++|++|||+
T Consensus 165 rpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~ 244 (396)
T PLN03158 165 KPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFF 244 (396)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCC-CCCcc
Q 021513 176 CGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN-ENPGC 254 (311)
Q Consensus 176 vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~-~~~~~ 254 (311)
||++++++++++++++++++++++++|||++++||+++++++++++||+++++++|||||+.+||.|.|.++.. +..++
T Consensus 245 VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~ 324 (396)
T PLN03158 245 VGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGV 324 (396)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987643 34579
Q ss_pred ccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 255 MVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 255 l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
|+|||||||||+++.+......|+|+||++|.||.+++|||||||||++|+|+||.
T Consensus 325 l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 325 MKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred ecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 99999999999999998888999999999999999999999999999999999996
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-63 Score=435.41 Aligned_cols=244 Identities=47% Similarity=0.785 Sum_probs=234.0
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC-
Q 021513 67 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD- 145 (311)
Q Consensus 67 ~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~- 145 (311)
.+||++||+.||+||+|++++++.+.+.++||+|+.||+..+++++.++|++|++++|.+||..+|+|.|+.+|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCH-HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCc
Q 021513 146 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSD-GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 224 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~-~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~ 224 (311)
+++|++||+|+||+|+.++||++|.++||.||+.++ ..++|.+++++|++++|+.+|||+++++|+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 577999999999999999999999999999997664 7777999999999999999999999999999999999999999
Q ss_pred ccccccccccCcccccCCccccCCCCC-CccccCCcEEEEcceeecCCCcceecC-CCCeeeecCCCceEEEeEEEEEcC
Q 021513 225 VVERFVGHGVGKVFHSEPIIYHNRNEN-PGCMVEGQTFTIEPILTMGSIECITWP-DNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 225 ~~~~~~GHgIG~~~he~p~i~~~~~~~-~~~l~~GmvftiEp~i~~~~~~~~~~~-d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
++++|+|||||..+|+.|+|+++..+. ...|+|||||+||||++.+......++ |+|++.|.||+.++||||||+||+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~ 243 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTE 243 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeC
Confidence 999999999999999999999976543 369999999999999999999999998 999999999999999999999999
Q ss_pred CCeEeCCC
Q 021513 303 TGAEILTI 310 (311)
Q Consensus 303 ~G~e~LT~ 310 (311)
+|+|+||.
T Consensus 244 ~g~eilT~ 251 (255)
T COG0024 244 DGCEILTL 251 (255)
T ss_pred CCcEEeeC
Confidence 99999995
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.2e-60 Score=420.63 Aligned_cols=246 Identities=37% Similarity=0.592 Sum_probs=232.7
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC
Q 021513 66 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 145 (311)
Q Consensus 66 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~ 145 (311)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....++.+||.++|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 37999999999999999999999999999999999999999999999999998765567789989999999999999999
Q ss_pred CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc
Q 021513 146 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 225 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~ 225 (311)
+++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++.+|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccCcccccCCccccCC-CCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCC
Q 021513 226 VERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTG 304 (311)
Q Consensus 226 ~~~~~GHgIG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G 304 (311)
.++++|||||+.+||.|.+.++. .+++.+|++||||++||+++.+......|.|+|++.|.+|.+|+|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 88999999999999999987543 34567899999999999999988888889999999999999999999999999999
Q ss_pred eEeCCCC
Q 021513 305 AEILTIC 311 (311)
Q Consensus 305 ~e~LT~~ 311 (311)
+|+||++
T Consensus 242 ~e~lt~~ 248 (248)
T PRK12897 242 PIILTKL 248 (248)
T ss_pred cEEeecC
Confidence 9999974
No 5
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.2e-59 Score=423.48 Aligned_cols=246 Identities=30% Similarity=0.519 Sum_probs=229.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCC----CCCCCeeeecCCCcccc
Q 021513 66 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY----GGFPKSVCTSVNECMCH 141 (311)
Q Consensus 66 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~----~~~~~~v~~g~n~~~~h 141 (311)
..+||++||++||+|++++++++.++.+.++||+||.||++.++..+.+.|+.|..+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 47999999999999999999999999999999999999999999999999998877654 45999999999999999
Q ss_pred CCCCCCCCCCCCeEEEEeee---------------------------eeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHH
Q 021513 142 GIPDSRQLQDGDIINIDVTV---------------------------YLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECL 194 (311)
Q Consensus 142 ~~p~~~~l~~Gd~v~iD~g~---------------------------~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~ 194 (311)
+.|++++|++||+|++|+++ .++||++|++|||++|+++++++++++++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCC-CCCCccccCCcEEEEcceeecCCCc
Q 021513 195 EKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIE 273 (311)
Q Consensus 195 ~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~ 273 (311)
+++++.+|||++++||+++++++++++||..+.+++|||||+.+||.|.+.++. .+.+.+|+|||||+|||++|.+...
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 999999999999999999999999999999888999999999999999986542 3456799999999999999997655
Q ss_pred ce-ecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCCC
Q 021513 274 CI-TWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311 (311)
Q Consensus 274 ~~-~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~~ 311 (311)
.. .++|+|++.+.+|+.++|+||||+||++|+|+||.+
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCC
Confidence 44 468999999999999999999999999999999964
No 6
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.2e-58 Score=420.84 Aligned_cols=249 Identities=45% Similarity=0.783 Sum_probs=232.2
Q ss_pred CCCc-ccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCC--CCCCeeeecCCCcc
Q 021513 63 SPEY-QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYG--GFPKSVCTSVNECM 139 (311)
Q Consensus 63 ~~~r-~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~--~~~~~v~~g~n~~~ 139 (311)
..++ +|||++||++||+|+++++++++++.+.++||+||.||++.++..+.+.|+.|+.++|. +||+++|+|.|+.+
T Consensus 37 ~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~ 116 (291)
T PRK12318 37 SQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVI 116 (291)
T ss_pred CCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeecccee
Confidence 3345 49999999999999999999999999999999999999999999999999988777664 58989999999999
Q ss_pred ccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHH
Q 021513 140 CHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAE 219 (311)
Q Consensus 140 ~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~ 219 (311)
+|+.|++++|++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++.+|||++++||+++++++++
T Consensus 117 ~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~ 196 (291)
T PRK12318 117 CHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCAD 196 (291)
T ss_pred ecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceec-CCCCeeeecCCCceEEEeEEE
Q 021513 220 KYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITW-PDNWTTLTADGNPAAQFEHTI 298 (311)
Q Consensus 220 ~~G~~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~-~d~w~~~t~~g~~~~~~Edtv 298 (311)
++||....+++|||||+.+||.|.+..+.++++.+|++||||+|||++|.+....+.+ .++|++.+.||..++|+||||
T Consensus 197 ~~G~~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv 276 (291)
T PRK12318 197 KYGFSVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTI 276 (291)
T ss_pred HcCCccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEE
Confidence 9999987889999999999999998765555667999999999999999987666655 489999999999999999999
Q ss_pred EEcCCCeEeCCCC
Q 021513 299 LITRTGAEILTIC 311 (311)
Q Consensus 299 lVt~~G~e~LT~~ 311 (311)
+||++|+|+||.+
T Consensus 277 ~VTe~G~e~LT~~ 289 (291)
T PRK12318 277 LITETGYEILTLL 289 (291)
T ss_pred EEcCCcceeCCCC
Confidence 9999999999975
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9e-58 Score=409.56 Aligned_cols=247 Identities=43% Similarity=0.736 Sum_probs=233.6
Q ss_pred CCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCC
Q 021513 64 PEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI 143 (311)
Q Consensus 64 ~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~ 143 (311)
+.++|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+++..+.+||..+|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 44689999999999999999999999999999999999999999999999999998877777899999999999999999
Q ss_pred CCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCC
Q 021513 144 PDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF 223 (311)
Q Consensus 144 p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~ 223 (311)
|++++|++||+|++|+++.++||++|++|||++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCcccccCCccccC--CCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEc
Q 021513 224 GVVERFVGHGVGKVFHSEPIIYHN--RNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 301 (311)
Q Consensus 224 ~~~~~~~GHgIG~~~he~p~i~~~--~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt 301 (311)
....+++|||||+.+||.|.+... ..+++.+|++||||+|||+++.+..+...|+|+|++.+.+|.+++|+||||+||
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 877899999999999999965432 234567999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeCCC
Q 021513 302 RTGAEILTI 310 (311)
Q Consensus 302 ~~G~e~LT~ 310 (311)
++|+|+||+
T Consensus 246 ~~G~e~Lt~ 254 (255)
T PRK12896 246 RDGPEILTD 254 (255)
T ss_pred CCcceecCC
Confidence 999999996
No 8
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.8e-57 Score=403.69 Aligned_cols=244 Identities=48% Similarity=0.757 Sum_probs=231.6
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCC
Q 021513 67 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDS 146 (311)
Q Consensus 67 ~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~ 146 (311)
+|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+...++.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988766777899899999999999999999
Q ss_pred CCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccc
Q 021513 147 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV 226 (311)
Q Consensus 147 ~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~ 226 (311)
++|++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++.+|||++++||+++++++++++|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccccCcccccCCccccCC-CCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCe
Q 021513 227 ERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 305 (311)
Q Consensus 227 ~~~~GHgIG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~ 305 (311)
.+++|||||+.+||.|.+..+. .+++.+|++||||+|||++|.+......+.++|++..++|.+++|+||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 8899999999999999876542 245789999999999999999988888899999999999999999999999999999
Q ss_pred EeCCC
Q 021513 306 EILTI 310 (311)
Q Consensus 306 e~LT~ 310 (311)
|+||.
T Consensus 242 e~Lt~ 246 (247)
T TIGR00500 242 EILTE 246 (247)
T ss_pred EEccC
Confidence 99995
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1e-56 Score=401.99 Aligned_cols=246 Identities=50% Similarity=0.819 Sum_probs=232.8
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC
Q 021513 66 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 145 (311)
Q Consensus 66 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~ 145 (311)
..|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.++.+|+..+++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 57999999999999999999999999999999999999999999999999998776667778888999999999999999
Q ss_pred CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc
Q 021513 146 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 225 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~ 225 (311)
+++|++||+|.+|+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccCcccccCCccccC-CCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCC
Q 021513 226 VERFVGHGVGKVFHSEPIIYHN-RNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTG 304 (311)
Q Consensus 226 ~~~~~GHgIG~~~he~p~i~~~-~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G 304 (311)
.++++|||||+.+||.|.+..+ ..+++.+|+|||||+|||+++.+......|+++|++.+++|.+++++||||+||++|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G 242 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDG 242 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCc
Confidence 7889999999999999987654 235678999999999999999998888899999999999999999999999999999
Q ss_pred eEeCCCC
Q 021513 305 AEILTIC 311 (311)
Q Consensus 305 ~e~LT~~ 311 (311)
+|+||.+
T Consensus 243 ~e~Lt~~ 249 (252)
T PRK05716 243 PEILTLR 249 (252)
T ss_pred cEEeeCC
Confidence 9999974
No 10
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=7.1e-53 Score=374.11 Aligned_cols=237 Identities=54% Similarity=0.920 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 153 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 153 (311)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.++.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999888777788888899999999999999999999999
Q ss_pred eEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccc
Q 021513 154 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHG 233 (311)
Q Consensus 154 ~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHg 233 (311)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cCcccccCCcccc-CCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 234 VGKVFHSEPIIYH-NRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 234 IG~~~he~p~i~~-~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
||+.+||.|.+.. ...+++.+|++||||++||++|.+......|+++|.+.+++|.+++|+||||+||++|+|+||+
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 9999999998762 2235678999999999999999998888999999999999999999999999999999999985
No 11
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=1.3e-52 Score=393.90 Aligned_cols=225 Identities=21% Similarity=0.392 Sum_probs=208.8
Q ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCcccc
Q 021513 62 LSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCH 141 (311)
Q Consensus 62 l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h 141 (311)
+..+|+|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|+..+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEeccccccC
Confidence 57789999999999999999999999999999999999999999999999999998753 4889999999999999
Q ss_pred CCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccC--CCHH---HHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHH
Q 021513 142 GIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN--VSDG---LKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE 216 (311)
Q Consensus 142 ~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~--~~~~---~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~ 216 (311)
+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+.+.++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 2333 7899999999999999999999999999999999
Q ss_pred HHHHcCCcc-cccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEe
Q 021513 217 HAEKYGFGV-VERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFE 295 (311)
Q Consensus 217 ~~~~~G~~~-~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~E 295 (311)
++++.||.. +.|.+|||||+.+||.|.+.. +++.+|++||||+|||++|.+ |.+|+|+|
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvriE 335 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRIE 335 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeC-----------------CCCEEEEe
Confidence 999999985 578899999999999998854 567899999999999999975 45789999
Q ss_pred EEEEEcCCCeEeCCCC
Q 021513 296 HTILITRTGAEILTIC 311 (311)
Q Consensus 296 dtvlVt~~G~e~LT~~ 311 (311)
|||+||++|+|+||++
T Consensus 336 d~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 336 DVVLVTPQGAEVLYAM 351 (361)
T ss_pred eEEEECCCCcEeCcCC
Confidence 9999999999999975
No 12
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-51 Score=386.60 Aligned_cols=230 Identities=30% Similarity=0.441 Sum_probs=214.7
Q ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecC
Q 021513 56 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 135 (311)
Q Consensus 56 ~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~ 135 (311)
.+....+.++|+|||+.||+.||+|+++++.++..+++.++||+||.||++.++..+.+.|+... +|++++++|.
T Consensus 142 ~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~ 216 (384)
T COG0006 142 VDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGE 216 (384)
T ss_pred eccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEeccc
Confidence 44556677899999999999999999999999999999999999999999999999999996542 4899999999
Q ss_pred CCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHH
Q 021513 136 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 215 (311)
Q Consensus 136 n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~ 215 (311)
|++.+|+.|+++++++||+|+||+|+.|+||++|+||||++|+|+++++++|+.+.++++++++++|||+++++|+.+++
T Consensus 217 n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar 296 (384)
T COG0006 217 NAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAAR 296 (384)
T ss_pred cccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcc-cccccccccC--cccccCCc-cccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCce
Q 021513 216 EHAEKYGFGV-VERFVGHGVG--KVFHSEPI-IYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPA 291 (311)
Q Consensus 216 ~~~~~~G~~~-~~~~~GHgIG--~~~he~p~-i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~ 291 (311)
+++.+.||.. +.|.+|||+| +.+||.|. +.. +...+|+|||||++||++|.+ |.+|
T Consensus 297 ~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~---~~~~~L~~GMv~t~Epg~y~~-----------------g~~G 356 (384)
T COG0006 297 QVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSP---GSDTTLEPGMVFSIEPGIYIP-----------------GGGG 356 (384)
T ss_pred HHHHhcCCcccccCCccccCCCCcccCcCccccCC---CCCccccCCcEEEeccccccC-----------------CCce
Confidence 9999988875 4667999999 99999994 543 567899999999999999875 7889
Q ss_pred EEEeEEEEEcCCCeEeCCC
Q 021513 292 AQFEHTILITRTGAEILTI 310 (311)
Q Consensus 292 ~~~EdtvlVt~~G~e~LT~ 310 (311)
+++||+|+||++|+|+||.
T Consensus 357 irIEd~vlVte~G~e~LT~ 375 (384)
T COG0006 357 VRIEDTVLVTEDGFEVLTR 375 (384)
T ss_pred EEEEEEEEEcCCCceeccc
Confidence 9999999999999999994
No 13
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.4e-50 Score=373.69 Aligned_cols=230 Identities=20% Similarity=0.309 Sum_probs=206.0
Q ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecC
Q 021513 56 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 135 (311)
Q Consensus 56 ~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~ 135 (311)
.+....+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.+..++.+.|... +..| .++++|.
T Consensus 83 ~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~ 157 (323)
T PRK15173 83 VDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGA 157 (323)
T ss_pred EEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECC
Confidence 3455677889999999999999999999999999999999999999999999998888876532 1123 3566676
Q ss_pred CCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHH
Q 021513 136 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 215 (311)
Q Consensus 136 n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~ 215 (311)
+ ..+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++.+|||++++||+++++
T Consensus 158 ~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~ 236 (323)
T PRK15173 158 D-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTM 236 (323)
T ss_pred C-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 6 568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcc-cccccccccCc--ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceE
Q 021513 216 EHAEKYGFGV-VERFVGHGVGK--VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAA 292 (311)
Q Consensus 216 ~~~~~~G~~~-~~~~~GHgIG~--~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~ 292 (311)
+++++.|+.. ..+++|||||+ .+||.|.+.. +++.+|++||||+|||++|.+ |.+|+
T Consensus 237 ~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggv 296 (323)
T PRK15173 237 EVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSI 296 (323)
T ss_pred HHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEE
Confidence 9999999974 56789999996 8899999864 456799999999999999864 45689
Q ss_pred EEeEEEEEcCCCeEeCCCC
Q 021513 293 QFEHTILITRTGAEILTIC 311 (311)
Q Consensus 293 ~~EdtvlVt~~G~e~LT~~ 311 (311)
++||||+||++|+|+||++
T Consensus 297 riEDtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 297 MIEDMILINKEGIEFLSKL 315 (323)
T ss_pred EEeeEEEEcCCcceeCCCC
Confidence 9999999999999999975
No 14
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.5e-50 Score=387.42 Aligned_cols=238 Identities=22% Similarity=0.318 Sum_probs=209.8
Q ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCC
Q 021513 57 TSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 136 (311)
Q Consensus 57 ~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n 136 (311)
++.+.+.++|+|||++||++||+|++++++++.++++.++||+||.||++.+...+.++|+... +|++++++|.|
T Consensus 162 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~n 236 (438)
T PRK10879 162 DWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGEN 236 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCc
Confidence 4455677789999999999999999999999999999999999999999999999999997532 47889999999
Q ss_pred CccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHH
Q 021513 137 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 215 (311)
Q Consensus 137 ~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~ 215 (311)
.+++|+.|++++|++||+|++|+|+.++||++|++|||++ |+++++++++|++++++++++++.+|||+++++|++++.
T Consensus 237 a~~~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~ 316 (438)
T PRK10879 237 GCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVV 316 (438)
T ss_pred cccccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999988
Q ss_pred HHHH------------------HcCCcc-cccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCccee
Q 021513 216 EHAE------------------KYGFGV-VERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECIT 276 (311)
Q Consensus 216 ~~~~------------------~~G~~~-~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~ 276 (311)
+++. +.++.. +.|.+||+||+.+|+.|.+. .+++.+|+|||||||||++|.+.
T Consensus 317 ~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~----- 388 (438)
T PRK10879 317 RIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAP----- 388 (438)
T ss_pred HHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECC-----
Confidence 7653 334432 46779999999999988753 24567999999999999999864
Q ss_pred cCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 277 WPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 277 ~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
+|++.....++|+|+||+|+||++|+|+||.
T Consensus 389 ---~~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 389 ---DADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred ---CcCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 2223333355799999999999999999996
No 15
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=8.6e-50 Score=379.36 Aligned_cols=231 Identities=20% Similarity=0.292 Sum_probs=207.8
Q ss_pred CCCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeec
Q 021513 55 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTS 134 (311)
Q Consensus 55 ~~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g 134 (311)
..+..+.+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|.... ..| +++.+|
T Consensus 165 ~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G 239 (406)
T PRK14575 165 FVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVG 239 (406)
T ss_pred EEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEEC
Confidence 345556778899999999999999999999999999999999999999999999998888776431 112 456677
Q ss_pred CCCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHH
Q 021513 135 VNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 214 (311)
Q Consensus 135 ~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i 214 (311)
.+ ..+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++
T Consensus 240 ~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~ 318 (406)
T PRK14575 240 AD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDST 318 (406)
T ss_pred CC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 76 56899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcc-cccccccccCc--ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCce
Q 021513 215 SEHAEKYGFGV-VERFVGHGVGK--VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPA 291 (311)
Q Consensus 215 ~~~~~~~G~~~-~~~~~GHgIG~--~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~ 291 (311)
++++++.||.. ..+++|||||+ .+||.|++.. +++.+|++||||+|||++|.+ |.+|
T Consensus 319 ~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gG 378 (406)
T PRK14575 319 MEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGS 378 (406)
T ss_pred HHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcE
Confidence 99999999974 46789999995 8899999865 456799999999999999874 4578
Q ss_pred EEEeEEEEEcCCCeEeCCCC
Q 021513 292 AQFEHTILITRTGAEILTIC 311 (311)
Q Consensus 292 ~~~EdtvlVt~~G~e~LT~~ 311 (311)
+++||||+||++|+|+||++
T Consensus 379 vriEDtvlVT~~G~e~LT~~ 398 (406)
T PRK14575 379 IMIEDMILINKEGIEFLSKL 398 (406)
T ss_pred EEEEeEEEEcCCCcccCCCC
Confidence 99999999999999999974
No 16
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=2.2e-49 Score=349.09 Aligned_cols=224 Identities=21% Similarity=0.234 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCC-CCCCCCCCeeeecCCCccccCCCCCCCCCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSP-LGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 152 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~-~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~G 152 (311)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 679999999999999999999999999999999999999999865322 1222333578999999999999999999999
Q ss_pred CeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccc-ccccc
Q 021513 153 DIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV-ERFVG 231 (311)
Q Consensus 153 d~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~-~~~~G 231 (311)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++||... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 45699
Q ss_pred cccCcccccCCcc--ccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCC
Q 021513 232 HGVGKVFHSEPII--YHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 309 (311)
Q Consensus 232 HgIG~~~he~p~i--~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT 309 (311)
||||+.+|+.|.- .....+++.+|+|||||+|||++|.+.. .+|.+++|+||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~-------------~~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEG-------------QPGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeeccc-------------CCCCcEEEeeeEEEECCCccccCc
Confidence 9999999998731 1112345689999999999999997521 125679999999999999999998
Q ss_pred C
Q 021513 310 I 310 (311)
Q Consensus 310 ~ 310 (311)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 17
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4.9e-50 Score=379.66 Aligned_cols=233 Identities=18% Similarity=0.217 Sum_probs=202.3
Q ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecC
Q 021513 56 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 135 (311)
Q Consensus 56 ~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~ 135 (311)
.+..+.+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+...... +.....-.+.+|.+++++|.
T Consensus 146 ~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~~~~g~~~~~~~~iv~sG~ 224 (391)
T TIGR02993 146 VDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GVDGFGGDYPAIVPLLPSGA 224 (391)
T ss_pred EehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cccCcCCCcCCcccccccCc
Confidence 34556678899999999999999999999999999999999999999999988655332 11000001223556778999
Q ss_pred CCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHH
Q 021513 136 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 215 (311)
Q Consensus 136 n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~ 215 (311)
|+..+|+.|++++|++||+|++|+++.|+||++|++|||++|+|+++++++|+.+.++++++++++|||++++||+++++
T Consensus 225 ~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~ 304 (391)
T TIGR02993 225 DASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFF 304 (391)
T ss_pred cccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcccccccccccCcccccC-----CccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCc
Q 021513 216 EHAEKYGFGVVERFVGHGVGKVFHSE-----PIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNP 290 (311)
Q Consensus 216 ~~~~~~G~~~~~~~~GHgIG~~~he~-----p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~ 290 (311)
++++++||.. .|++|||||+.+|+. |.+.. +++.+|++||||+|||++|.+ | .
T Consensus 305 ~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~~---~~~~~L~~GMv~tvEpgiy~~-----------------~-~ 362 (391)
T TIGR02993 305 AVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLRP---GDNTVLKPGMTFHFMTGLWME-----------------D-W 362 (391)
T ss_pred HHHHHcCCcc-CCCceeeeccCcCCCCCCccccccC---CCCceecCCCEEEEcceeEeC-----------------C-C
Confidence 9999999974 588999999988742 34432 567899999999999999974 2 4
Q ss_pred eEEEeEEEEEcCCCeEeCCCC
Q 021513 291 AAQFEHTILITRTGAEILTIC 311 (311)
Q Consensus 291 ~~~~EdtvlVt~~G~e~LT~~ 311 (311)
|+++||||+||++|+|+||.+
T Consensus 363 Gvried~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 363 GLEITESILITETGVECLSSV 383 (391)
T ss_pred CeEEeeEEEECCCcceecccC
Confidence 799999999999999999975
No 18
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=3.1e-49 Score=351.85 Aligned_cols=223 Identities=25% Similarity=0.316 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 153 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 153 (311)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+ +|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999873 3778899999999999999999999999
Q ss_pred eEEEEeeeeeCcEEeeeeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCC---------
Q 021513 154 IINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF--------- 223 (311)
Q Consensus 154 ~v~iD~g~~~~Gy~~D~~RT~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~--------- 223 (311)
+|++|+++.++||++|++|||++ |+++++++++|+++.++++++++.+|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 68999999999999999999999999999999999999999987643
Q ss_pred ----------cccccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEE
Q 021513 224 ----------GVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQ 293 (311)
Q Consensus 224 ----------~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~ 293 (311)
..+.|.+|||||+++||.|.+.. ..+++.+|++||||+|||++|.+...... ++. .+.+++|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~------~~~~g~~ 226 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEY------FRGGGIR 226 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-ccc------cceeEEE
Confidence 23466799999999999997721 12567899999999999999987522211 122 2568999
Q ss_pred EeEEEEEcCCCeEeCCC
Q 021513 294 FEHTILITRTGAEILTI 310 (311)
Q Consensus 294 ~EdtvlVt~~G~e~LT~ 310 (311)
+||||+||++|+|+||+
T Consensus 227 ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 227 IEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeeEEEEcCCcceeCcC
Confidence 99999999999999995
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=4.3e-49 Score=374.49 Aligned_cols=230 Identities=20% Similarity=0.268 Sum_probs=207.5
Q ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecC
Q 021513 56 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 135 (311)
Q Consensus 56 ~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~ 135 (311)
.+..+.+.++|+|||++||++||+|++++++++.++.+.++||+||.||++.++..+.+.|... +..| +++++|.
T Consensus 165 vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~ 239 (405)
T PRK14576 165 VDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGD 239 (405)
T ss_pred EEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECC
Confidence 3445567789999999999999999999999999999999999999999999999999887531 1123 5778888
Q ss_pred CCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHH
Q 021513 136 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 215 (311)
Q Consensus 136 n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~ 215 (311)
| ..+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++
T Consensus 240 ~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~ 318 (405)
T PRK14576 240 N-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTM 318 (405)
T ss_pred c-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 7 568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcc-cccccccccC--cccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceE
Q 021513 216 EHAEKYGFGV-VERFVGHGVG--KVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAA 292 (311)
Q Consensus 216 ~~~~~~G~~~-~~~~~GHgIG--~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~ 292 (311)
++++++||.. ..+++|||+| +.+||.|.+.. +++.+|++||||+|||++|.. |.+|+
T Consensus 319 ~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~-----------------g~ggv 378 (405)
T PRK14576 319 AVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVST---QATETFCPGMVLSLETPYYGI-----------------GVGSI 378 (405)
T ss_pred HHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCC---CCCCccCCCCEEEECCceeec-----------------CCCEE
Confidence 9999999974 4578999999 78899998753 457799999999999998864 56799
Q ss_pred EEeEEEEEcCCCeEeCCCC
Q 021513 293 QFEHTILITRTGAEILTIC 311 (311)
Q Consensus 293 ~~EdtvlVt~~G~e~LT~~ 311 (311)
++||||+||++|+|+||++
T Consensus 379 riEDtvlVTe~G~e~LT~~ 397 (405)
T PRK14576 379 MLEDMILITDSGFEFLSKL 397 (405)
T ss_pred EEeeEEEECCCccccCCCC
Confidence 9999999999999999975
No 20
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.4e-47 Score=366.29 Aligned_cols=248 Identities=19% Similarity=0.208 Sum_probs=201.1
Q ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecC
Q 021513 56 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 135 (311)
Q Consensus 56 ~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~ 135 (311)
..+.+.+.++|+|||++||++||+|+++++++++++++.++||+||.||++.+... .+..+. ..+|++++++|.
T Consensus 149 ~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~---~~~~~~---~~~y~~iva~G~ 222 (443)
T PRK13607 149 KGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTA---TGQRDN---DVPYGNIVALNE 222 (443)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH---hCCCCc---CCCCCcEEEecC
Confidence 34556677889999999999999999999999999999999999999999865433 222222 135888999999
Q ss_pred CCccccCCCCCC-CCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHH
Q 021513 136 NECMCHGIPDSR-QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 214 (311)
Q Consensus 136 n~~~~h~~p~~~-~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i 214 (311)
|+.++|+.|+++ .+++||+|++|+|+.++||++|++|||+ |+++++++++|+++.+|++++++++|||++++||+.++
T Consensus 223 naa~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa 301 (443)
T PRK13607 223 HAAVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQM 301 (443)
T ss_pred cceEecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 999999999875 6899999999999999999999999999 88899999999999999999999999999999999999
Q ss_pred HHHH----HHcCCc----------------ccccccccccCcccccCCccccC-------------CCCCCccccCCcEE
Q 021513 215 SEHA----EKYGFG----------------VVERFVGHGVGKVFHSEPIIYHN-------------RNENPGCMVEGQTF 261 (311)
Q Consensus 215 ~~~~----~~~G~~----------------~~~~~~GHgIG~~~he~p~i~~~-------------~~~~~~~l~~Gmvf 261 (311)
++++ .+.|+. .+.|.+||+||+++|+.+.+... .-....+|+|||||
T Consensus 302 ~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~ 381 (443)
T PRK13607 302 HQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVL 381 (443)
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEE
Confidence 8766 444443 24678999999999998543210 01245789999999
Q ss_pred EEcceeecCCCcceecCC-------CCeeeec-CCCceEEEeEEEEEcCCCeEeCCC
Q 021513 262 TIEPILTMGSIECITWPD-------NWTTLTA-DGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 262 tiEp~i~~~~~~~~~~~d-------~w~~~t~-~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
||||++|.+...+..|.. +|..+.+ .+.+|+|+||+|+||++|+|+||+
T Consensus 382 TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 382 TIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred EECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 999999997532222211 2222211 256699999999999999999995
No 21
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=9.4e-46 Score=347.46 Aligned_cols=244 Identities=23% Similarity=0.365 Sum_probs=214.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCC----CCCCCCCeeeecCCCcccc
Q 021513 66 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPL----GYGGFPKSVCTSVNECMCH 141 (311)
Q Consensus 66 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~----~~~~~~~~v~~g~n~~~~h 141 (311)
-.+|+++||++||+|++|++++++.+.+.++||+|+.||+..+++++.+.++. .+. ++.+++..+|+|.|++++|
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 47999999999999999999999999999999999999999999999987653 211 1345555567789999999
Q ss_pred CCC--C--CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccC-----CCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHH
Q 021513 142 GIP--D--SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN-----VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGK 212 (311)
Q Consensus 142 ~~p--~--~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~-----~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~ 212 (311)
++| + ++.|++||+|+||+|+.++||++|++|||++|+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 478999999999999999999999999999995 4678999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccccccCccccc-CCccccCCC------CCCccccCCcEEEEcceeecCCCcceecCCCCee--
Q 021513 213 RISEHAEKYGFGVVERFVGHGVGKVFHS-EPIIYHNRN------ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTT-- 283 (311)
Q Consensus 213 ~i~~~~~~~G~~~~~~~~GHgIG~~~he-~p~i~~~~~------~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~-- 283 (311)
+++++++++||.++++++|||||..+|+ .|.|..... .....|++||||+|||+++.+.+.+..+++.||+
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~ 249 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 249 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEE
Confidence 9999999999999999999999999997 787643322 2356899999999999999998887777665542
Q ss_pred ------------------------------------------------------------eecCCCceEEEeEEEEEcCC
Q 021513 284 ------------------------------------------------------------LTADGNPAAQFEHTILITRT 303 (311)
Q Consensus 284 ------------------------------------------------------------~t~~g~~~~~~EdtvlVt~~ 303 (311)
..++|.+.+|||+||+|+++
T Consensus 250 ~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~ 329 (389)
T TIGR00495 250 RDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPN 329 (389)
T ss_pred ECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCC
Confidence 34568899999999999999
Q ss_pred CeEeCCC
Q 021513 304 GAEILTI 310 (311)
Q Consensus 304 G~e~LT~ 310 (311)
|+++||.
T Consensus 330 g~~~~t~ 336 (389)
T TIGR00495 330 GPMRITS 336 (389)
T ss_pred CcEEeCC
Confidence 9999996
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=3.2e-45 Score=318.14 Aligned_cols=207 Identities=28% Similarity=0.512 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 153 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 153 (311)
|++||+|+++++.++.++.+.++||+||.||++.+++.+.++|+++. +|++++++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 57999999999999999999999999999999999999999998742 4889999999999999999999999999
Q ss_pred eEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc-ccccccc
Q 021513 154 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH 232 (311)
Q Consensus 154 ~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~-~~~~~GH 232 (311)
+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4667999
Q ss_pred ccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCe
Q 021513 233 GVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 305 (311)
Q Consensus 233 gIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~ 305 (311)
+||+.+||.|.+.. +++..|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYISP---GSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcCC---CCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 99999999998754 567899999999999999864 457899999999999995
No 23
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.4e-44 Score=341.71 Aligned_cols=263 Identities=24% Similarity=0.347 Sum_probs=218.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-----------CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHH
Q 021513 39 SPRLPVPDHIPKPPYVSSTSL-----------PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKA 107 (311)
Q Consensus 39 s~~~~~~~~i~~p~~~~~~~~-----------~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~ 107 (311)
+|++++.+.+|.-.|....+. +.-.+.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..
T Consensus 112 p~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~e~~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ 191 (470)
T PTZ00053 112 PPTIPVSKQFKDGEYPVGEIQEYPGENSSRTSSEEKRELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICER 191 (470)
T ss_pred CCCCCHHHhCCCCCCCcceEEecCccccccCCchhhCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 667777777777666542221 111223456899999999999999999999999999999999999999
Q ss_pred HHHHHHHc----CCccCCCCCCCCCCeeeecCCCccccCCCC---CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCC
Q 021513 108 VHQMIIEA----GAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVS 180 (311)
Q Consensus 108 ~~~~~~~~----G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~---~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~ 180 (311)
++..+.+. |+.. ..+||+ |+|.|++.+|+.|+ +++|++||+|+||+|+.++||++|++|||++|
T Consensus 192 ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg--- 262 (470)
T PTZ00053 192 IESKSRELIEADGLKC----GWAFPT--GCSLNHCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN--- 262 (470)
T ss_pred HHHHHHHHHHhcCCcc----cCCCCc--eeecCccccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---
Confidence 98876654 5432 235887 46899999999996 67899999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCc---------ccccccccccCc-ccccCCccccCCCC
Q 021513 181 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG---------VVERFVGHGVGK-VFHSEPIIYHNRNE 250 (311)
Q Consensus 181 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~---------~~~~~~GHgIG~-~~he~p~i~~~~~~ 250 (311)
++++++++++++|++++|+.++||++++||+++++++++++||. ++++++|||||+ .+|+.|.++....+
T Consensus 263 ~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~ 342 (470)
T PTZ00053 263 PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGG 342 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCC
Confidence 68899999999999999999999999999999999999999974 468999999998 89998877766556
Q ss_pred CCccccCCcEEEEcceeecCCCcce------------------------------------------ecCCC--------
Q 021513 251 NPGCMVEGQTFTIEPILTMGSIECI------------------------------------------TWPDN-------- 280 (311)
Q Consensus 251 ~~~~l~~GmvftiEp~i~~~~~~~~------------------------------------------~~~d~-------- 280 (311)
+..+|++||||+|||+++.+.+.+. .|.+.
T Consensus 343 ~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~ 422 (470)
T PTZ00053 343 ENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLL 422 (470)
T ss_pred CCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHH
Confidence 7789999999999999997765432 11111
Q ss_pred -------------Ce-eeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 281 -------------WT-TLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 281 -------------w~-~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
+. .+.++|.+.+||||||+++++|.|+||+
T Consensus 423 gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vis~ 466 (470)
T PTZ00053 423 ALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSR 466 (470)
T ss_pred HHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEecCC
Confidence 01 1346789999999999999999999985
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=2.1e-44 Score=316.31 Aligned_cols=209 Identities=17% Similarity=0.146 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCC--CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC---CCCC
Q 021513 75 AKMRAACELAARVLDAAGKLVRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 149 (311)
Q Consensus 75 ~~~R~A~~ia~~~l~~~~~~i~pG--~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~---~~~l 149 (311)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++.+.|.++. .+|+++||+|.|+.++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 345666655 59999999999999 9999999999988877765432 258999999999999999998 8999
Q ss_pred CCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHcc-CCCchhHHHHHHHHHHHHcCCccccc
Q 021513 150 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCK-DGASFKKIGKRISEHAEKYGFGVVER 228 (311)
Q Consensus 150 ~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~k-pG~~~~ei~~~i~~~~~~~G~~~~~~ 228 (311)
++||+|++|+++.++||++|++|||++|+++++++++|+.+.+++.++++.++ ||+++++|.+++++++.+.|+. +.+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 99999999999999999999999999999999999999999999999999884 9999999999999999999996 678
Q ss_pred ccccccC--cccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeE
Q 021513 229 FVGHGVG--KVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAE 306 (311)
Q Consensus 229 ~~GHgIG--~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e 306 (311)
++||||| +.+||.|.+. +..+++.+|++||||+|||++|.+ |.+++++||+|+||++|+.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcC
Confidence 8999999 5889999875 223566899999999999999974 5678999999999999985
Q ss_pred e
Q 021513 307 I 307 (311)
Q Consensus 307 ~ 307 (311)
-
T Consensus 221 ~ 221 (224)
T cd01085 221 E 221 (224)
T ss_pred C
Confidence 3
No 25
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=4.1e-43 Score=319.57 Aligned_cols=227 Identities=31% Similarity=0.554 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC---CCCC
Q 021513 73 SIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 149 (311)
Q Consensus 73 EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~---~~~l 149 (311)
+|++||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||+.+ +.|+..+|+.|. ++.|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77654 567888999986 6789
Q ss_pred CCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccc
Q 021513 150 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF 229 (311)
Q Consensus 150 ~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~ 229 (311)
++||+|++|+|+.++||++|++||+++| ++++++++++.+|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred cccccCc-ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcce---------------------------------
Q 021513 230 VGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI--------------------------------- 275 (311)
Q Consensus 230 ~GHgIG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~--------------------------------- 275 (311)
+|||||+ .+|+.|.|+....+++.+|++||||+|||+++.+.+...
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~ 229 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYN 229 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCC
Confidence 9999997 899999987665567789999999999999987755431
Q ss_pred ------ecCC--------------------CCee-eecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 276 ------TWPD--------------------NWTT-LTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 276 ------~~~d--------------------~w~~-~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
.|-+ .+.+ ..++|++.+||||||+|+++|++++|+
T Consensus 230 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 230 TLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 1111 1112 356889999999999999999999985
No 26
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=2.2e-43 Score=306.72 Aligned_cols=204 Identities=31% Similarity=0.489 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHH-HHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCC
Q 021513 75 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQM-IIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 153 (311)
Q Consensus 75 ~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~-~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 153 (311)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56667443 24788999999999999999999999999
Q ss_pred eEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCC-ccccccccc
Q 021513 154 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 232 (311)
Q Consensus 154 ~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~-~~~~~~~GH 232 (311)
+|.+|+++.++||++|++||+++| ++++++++++.++++++.+++.+|||++++||+++++++++++|| ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 557889999
Q ss_pred ccCcccccC-CccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 233 GVGKVFHSE-PIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 233 gIG~~~he~-p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
+||+.+|+. |+|.. .+++.+|++||||+|||+++.. ++.+++++||||+||+
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~----------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI----------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE----------------TTSEEEEEBEEEEEES
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEcc----------------CCCcEEEEEEEEEECc
Confidence 999999997 99853 2577899999999999998732 1446999999999996
No 27
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=7.2e-43 Score=309.84 Aligned_cols=226 Identities=17% Similarity=0.215 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHHHHHhH-----hcCCC--CcHHHHHHHHHHHHHHcCCc-----cCCCCCCCCCCeeeecCCC-ccc
Q 021513 74 IAKMRAACELAARVLDAAGK-----LVRPS--VTTNEIDKAVHQMIIEAGAY-----PSPLGYGGFPKSVCTSVNE-CMC 140 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~-----~i~pG--~te~ei~~~~~~~~~~~G~~-----p~~~~~~~~~~~v~~g~n~-~~~ 140 (311)
++.+|+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. |..+. .+|++++++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976655 89999 99999999999999988744 22222 3599999999999 899
Q ss_pred cCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHH
Q 021513 141 HGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEK 220 (311)
Q Consensus 141 h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~ 220 (311)
|+.++++.++.|++|.+|+|+.|+|||+|++|||++| ++++++++|+.++++++++++.+|||++++||++++++++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCCcc---cccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEE
Q 021513 221 YGFGV---VERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHT 297 (311)
Q Consensus 221 ~G~~~---~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~Edt 297 (311)
.|+.. +.+.+|||||+++||.|.+.. .+++.+|++||||+|||+++... +.+....+++.+++++|||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~-------~~~~~~~~~~~~gv~ieDt 229 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQ-------NPEPKDKESKTYALLLSDT 229 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCccccc-------CccccCccCCeeEEEEEEE
Confidence 87543 345699999999999886533 24567999999999999998321 1111111236789999999
Q ss_pred EEEcCCCe-EeCCC
Q 021513 298 ILITRTGA-EILTI 310 (311)
Q Consensus 298 vlVt~~G~-e~LT~ 310 (311)
|+||++|+ |+||.
T Consensus 230 V~Vt~~G~~~~LT~ 243 (243)
T cd01091 230 ILVTEDEPAIVLTN 243 (243)
T ss_pred EEEcCCCCceecCC
Confidence 99999999 99985
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=2.2e-42 Score=315.10 Aligned_cols=229 Identities=31% Similarity=0.481 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCC---CC
Q 021513 71 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SR 147 (311)
Q Consensus 71 ~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~---~~ 147 (311)
-+||++||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.+ +||+.+ +.|+..+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4789999999999999999999999999999999999999999999886 388764 578999999985 57
Q ss_pred CCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccc
Q 021513 148 QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE 227 (311)
Q Consensus 148 ~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~ 227 (311)
.|++||+|++|+|+.++||++|++||+++|+ .++++++++++|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred cccccccCc-ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcce-------------------------------
Q 021513 228 RFVGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI------------------------------- 275 (311)
Q Consensus 228 ~~~GHgIG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~------------------------------- 275 (311)
+++|||||. .+|+.+.++....+++.+|++||||+|||+++.+.+.+.
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~ 230 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDEN 230 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHH
Confidence 999999995 788887665444456779999999999999886644421
Q ss_pred --------ecCCC---------------------Cee-eecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 276 --------TWPDN---------------------WTT-LTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 276 --------~~~d~---------------------w~~-~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
.|-+. +.+ ..++|++.+||||||+|+++|++++|+
T Consensus 231 ~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 231 YGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 12111 112 356889999999999999999999985
No 29
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.7e-42 Score=305.63 Aligned_cols=216 Identities=25% Similarity=0.407 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcC--CccC-CCCCCCCCCeeeecCCCccccCCC----CC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG--AYPS-PLGYGGFPKSVCTSVNECMCHGIP----DS 146 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G--~~p~-~~~~~~~~~~v~~g~n~~~~h~~p----~~ 146 (311)
+++||+|++|++++++++.+.++||+||.||+..+++++.+.. .++. ..++.+++...+++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 4689999999999999999999999999999988888887743 2322 122223333334557999999996 67
Q ss_pred CCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCH-----HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHc
Q 021513 147 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSD-----GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 221 (311)
Q Consensus 147 ~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~-----~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~ 221 (311)
++|++||+|++|+|+.++||++|++|||++|++++ ++++++++++++++++++.+|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999875 8999999999999999999999999999999999999999
Q ss_pred CCcccccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEc
Q 021513 222 GFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 301 (311)
Q Consensus 222 G~~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt 301 (311)
||.++..++||++|..++..|.-. .-...|++||||++||+++.+ |.+++++||||+||
T Consensus 161 G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~vt 219 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVLLT 219 (228)
T ss_pred CCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccC-----------------CCeEEEEEEEEEEc
Confidence 999889999998887443222100 124579999999999999864 77899999999999
Q ss_pred CCCeEeCCC
Q 021513 302 RTGAEILTI 310 (311)
Q Consensus 302 ~~G~e~LT~ 310 (311)
++|+|.||.
T Consensus 220 ~~G~e~lt~ 228 (228)
T cd01089 220 PNGVTVLTG 228 (228)
T ss_pred CCCCeeCCC
Confidence 999999984
No 30
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=5.9e-42 Score=312.00 Aligned_cols=226 Identities=31% Similarity=0.502 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCC---CCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDS---RQLQ 150 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~---~~l~ 150 (311)
++.||+|+++++++++++.+.++||+|+.||++.+++.+.++|..++ ||. ++|.|+..+|+.|+. ++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999997654 664 468999999999864 8899
Q ss_pred CCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccccccc
Q 021513 151 DGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFV 230 (311)
Q Consensus 151 ~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~ 230 (311)
+||+|++|+|+.++||++|++||+++|+ +++++++++++|++++++.+|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999889999
Q ss_pred ccccCc-ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcce----------------------------------
Q 021513 231 GHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI---------------------------------- 275 (311)
Q Consensus 231 GHgIG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~---------------------------------- 275 (311)
|||||. .+|+.|.|+....+++.+|++||||+|||+++.+.+...
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~ 229 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGT 229 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999995 889998876655556789999999999999987765531
Q ss_pred -----ecCCC---------------------Cee-eecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 276 -----TWPDN---------------------WTT-LTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 276 -----~~~d~---------------------w~~-~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
.|-+. +.+ ..++|...+||||||+|+++|++++|+
T Consensus 230 ~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 230 LPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 12111 122 356899999999999999999999985
No 31
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=6.4e-42 Score=295.61 Aligned_cols=206 Identities=31% Similarity=0.543 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCC
Q 021513 74 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 153 (311)
Q Consensus 74 I~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 153 (311)
|+.||+|+++++.+++.+.+.++||+||.|+++.+.+.+.++|+.+ .++.++++|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999843 2677888888889999999999999999
Q ss_pred eEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCC-ccccccccc
Q 021513 154 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 232 (311)
Q Consensus 154 ~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~-~~~~~~~GH 232 (311)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||++++||+++++++++++|+ ....+.+||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 456888999
Q ss_pred ccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCe
Q 021513 233 GVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 305 (311)
Q Consensus 233 gIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~ 305 (311)
+||+.+|+.|.+.. +.+.+|++||+|+|||+++.+ +.+++++||||+||++|+
T Consensus 155 ~iG~~~~e~~~~~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLKA---GDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcCC---CCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 99999999998543 456799999999999999874 357899999999999985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-43 Score=315.13 Aligned_cols=235 Identities=22% Similarity=0.321 Sum_probs=209.7
Q ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCC
Q 021513 58 SLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE 137 (311)
Q Consensus 58 ~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~ 137 (311)
+...+.++|.||||+|+++||+||.|+.+++...+-.-|++..|..+++.++..++.+|+.-. .||+.|+.|.|+
T Consensus 218 ~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~-----AYpPVVAgG~na 292 (488)
T KOG2414|consen 218 VSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRL-----AYPPVVAGGKNA 292 (488)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCcccc-----ccCCeeecCccc
Confidence 345577889999999999999999999999999999999999999999999999999999753 599999999999
Q ss_pred ccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccC--CCchhHHHHHH
Q 021513 138 CMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKD--GASFKKIGKRI 214 (311)
Q Consensus 138 ~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kp--G~~~~ei~~~i 214 (311)
...||.-++..|.++|+|++|.|+.++||++|++|||.+ |..++.|++||++++..++..|+.|+| |.++++|+...
T Consensus 293 ~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s 372 (488)
T KOG2414|consen 293 NTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERS 372 (488)
T ss_pred ceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHH
Confidence 999999999999999999999999999999999999999 999999999999999999999999999 99999999776
Q ss_pred HHHH----HHcCC------------cccccccccccCcccccCCccccCCCCCCccccCCcEEEEcceeecCCCcceecC
Q 021513 215 SEHA----EKYGF------------GVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWP 278 (311)
Q Consensus 215 ~~~~----~~~G~------------~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~ 278 (311)
.+.+ ++.|. ..++|.+||-+|+++|+-|.+.. +..|+|||||||||++|.|... .|+
T Consensus 373 ~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r-----~~pL~pg~ViTIEPGvYIP~d~--d~P 445 (488)
T KOG2414|consen 373 NELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSR-----DIPLQPGMVITIEPGVYIPEDD--DPP 445 (488)
T ss_pred HHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCC-----CccCCCCceEEecCceecCccC--CCc
Confidence 6554 34443 23678899999999999999854 4589999999999999998532 233
Q ss_pred CCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513 279 DNWTTLTADGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 279 d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
..| .+.|+|+||.|+|+++|+|+||.
T Consensus 446 ~~F------rGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 446 EEF------RGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred hHh------cCceEEeecceEeccCCceeehh
Confidence 333 56899999999999999999994
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=3.2e-37 Score=276.04 Aligned_cols=249 Identities=19% Similarity=0.207 Sum_probs=205.8
Q ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCC
Q 021513 58 SLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE 137 (311)
Q Consensus 58 ~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~ 137 (311)
+.+.+.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+......+|.-.. .+|.+++|+|.|+
T Consensus 175 lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 175 LYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNS 250 (492)
T ss_pred hhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCc
Confidence 456788999999999999999999999999999999999999999999999999998886433 4588899999999
Q ss_pred ccccC----CCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHH
Q 021513 138 CMCHG----IPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGK 212 (311)
Q Consensus 138 ~~~h~----~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~ 212 (311)
.+.|+ .|+++.++.||.+++|.|+.|.+|.+|++++|.. |+.+++|+.+|+++.+++.++++++|||+.+.|++.
T Consensus 251 ~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~ 330 (492)
T KOG2737|consen 251 AVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHK 330 (492)
T ss_pred ceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHH
Confidence 99998 7999999999999999999999999999999999 999999999999999999999999999999999998
Q ss_pred HHHHHHHH----cC---------------CcccccccccccCcccccCCccc-cC-CC--------CCCccccCCcEEEE
Q 021513 213 RISEHAEK----YG---------------FGVVERFVGHGVGKVFHSEPIIY-HN-RN--------ENPGCMVEGQTFTI 263 (311)
Q Consensus 213 ~i~~~~~~----~G---------------~~~~~~~~GHgIG~~~he~p~i~-~~-~~--------~~~~~l~~Gmvfti 263 (311)
...+++-+ .| ....+|-+||-+|+.+|+-.--+ .+ ++ ...+.|++|||+|+
T Consensus 331 La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTv 410 (492)
T KOG2737|consen 331 LAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITV 410 (492)
T ss_pred HHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEe
Confidence 87776533 22 22357889999999999743211 11 11 22458999999999
Q ss_pred cceeecCCCcce-ecCCCCe-------eeec-CCCceEEEeEEEEEcCCCeEeCCC
Q 021513 264 EPILTMGSIECI-TWPDNWT-------TLTA-DGNPAAQFEHTILITRTGAEILTI 310 (311)
Q Consensus 264 Ep~i~~~~~~~~-~~~d~w~-------~~t~-~g~~~~~~EdtvlVt~~G~e~LT~ 310 (311)
||+.|+-..-.. .+.|.-. +... .+.+|+|+||.|+||.+|+|.||.
T Consensus 411 EPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 411 EPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred cCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 999996432111 0111000 0111 477899999999999999999984
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.93 E-value=1.2e-25 Score=215.88 Aligned_cols=248 Identities=18% Similarity=0.281 Sum_probs=200.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH-----hHhcCCC--CcHHHHHHHHHHHHHHc---
Q 021513 46 DHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA-----GKLVRPS--VTTNEIDKAVHQMIIEA--- 115 (311)
Q Consensus 46 ~~i~~p~~~~~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~-----~~~i~pG--~te~ei~~~~~~~~~~~--- 115 (311)
..+....|...+++--|..+-.||++.||+.+|+|++++...|... ...+..+ +|..-+...+..++.+.
T Consensus 115 ~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s 194 (960)
T KOG1189|consen 115 KRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYS 194 (960)
T ss_pred HHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccC
Confidence 3344456666677776788899999999999999999999999843 3445555 67788888888877664
Q ss_pred -CCccCCCCCCCCCCeeeecCCCcc-ccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHH
Q 021513 116 -GAYPSPLGYGGFPKSVCTSVNECM-CHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 193 (311)
Q Consensus 116 -G~~p~~~~~~~~~~~v~~g~n~~~-~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~ 193 (311)
|..|..+. .+||+++.+|.+--. +....++..| + +|...+|++|++||+.++|||+| .|+.++++.|+..+.+
T Consensus 195 ~~l~~~~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~a 269 (960)
T KOG1189|consen 195 PGLDPDLLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAA 269 (960)
T ss_pred cccCccccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHH
Confidence 44453343 358999999877543 4445567777 4 99999999999999999999999 6799999999999999
Q ss_pred HHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccc---cccccCcccccCCccccCCCCCCccccCCcEEEEcceeecC
Q 021513 194 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMG 270 (311)
Q Consensus 194 ~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~---~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~ 270 (311)
+.++++.||||++.++||.++.+++++.+...++.+ .|.|||++|.|..++.+. .++.+|++||||.|.-++..-
T Consensus 270 qe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~ina--Knd~~lk~gmvFni~lGf~nl 347 (960)
T KOG1189|consen 270 QEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINA--KNDRVLKKGMVFNISLGFSNL 347 (960)
T ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccc--cchhhhccCcEEEEeeccccc
Confidence 999999999999999999999999999998876665 799999999999987654 556899999999998877542
Q ss_pred CCcceecCCCCeeeecCCCceEEEeEEEEEcCCCe-EeCCCC
Q 021513 271 SIECITWPDNWTTLTADGNPAAQFEHTILITRTGA-EILTIC 311 (311)
Q Consensus 271 ~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~-e~LT~~ 311 (311)
. +. ...+.+++.+.|||||+++++ ++||.+
T Consensus 348 ~-------n~----~~~~~yaL~l~DTvlv~e~~p~~vLT~~ 378 (960)
T KOG1189|consen 348 T-------NP----ESKNSYALLLSDTVLVGEDPPAEVLTDS 378 (960)
T ss_pred c-------Cc----ccccchhhhccceeeecCCCcchhhccc
Confidence 1 11 112458899999999999998 999863
No 35
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.92 E-value=2.1e-24 Score=188.51 Aligned_cols=233 Identities=25% Similarity=0.379 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH----HcCCccCCCCCCCCCCeeeecCCCccccCCC
Q 021513 69 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSPLGYGGFPKSVCTSVNECMCHGIP 144 (311)
Q Consensus 69 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~----~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p 144 (311)
-..+..+-+|+|+++.+++-..+.+.|+||||..||+..++...+ +.|... ..+||+. .|.|.+..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a----Gi~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA----GIGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc----cccCCCc--ccccchhhhcCC
Confidence 345567789999999999999999999999999999999987544 334332 3468865 578999999998
Q ss_pred C---CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHc
Q 021513 145 D---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 221 (311)
Q Consensus 145 ~---~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~ 221 (311)
+ ..+|+.+|+++||+|.+.+|-..|++.|+.+ ++....|+.+++++...+|+...-.+++.||+++|+++++++
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 6 3579999999999999999999999999998 667888999999999999999999999999999999999997
Q ss_pred CCc---------ccccccccccCc-ccccCCccccCCCCCCccccCCcEEEEcceeecCCCcc-----------------
Q 021513 222 GFG---------VVERFVGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIEC----------------- 274 (311)
Q Consensus 222 G~~---------~~~~~~GHgIG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~----------------- 274 (311)
... .+++++||+|+. .+|....++...+++.+.|++|.+|+||..-+.|.+.+
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~ 310 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGH 310 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhccccc
Confidence 543 268889999998 77888777776678889999999999998776554332
Q ss_pred -------------------------eecCCCC----------------------eeeecCCCceEEEeEEEEEcCCCeEe
Q 021513 275 -------------------------ITWPDNW----------------------TTLTADGNPAAQFEHTILITRTGAEI 307 (311)
Q Consensus 275 -------------------------~~~~d~w----------------------~~~t~~g~~~~~~EdtvlVt~~G~e~ 307 (311)
+.|.|.. ....-+|.+.+||||||+..+.+.|+
T Consensus 311 vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEV 390 (397)
T KOG2775|consen 311 VPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEV 390 (397)
T ss_pred cccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcch
Confidence 1222211 11234699999999999999999999
Q ss_pred CCC
Q 021513 308 LTI 310 (311)
Q Consensus 308 LT~ 310 (311)
+|+
T Consensus 391 vsr 393 (397)
T KOG2775|consen 391 VSR 393 (397)
T ss_pred hcc
Confidence 985
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-23 Score=198.77 Aligned_cols=226 Identities=17% Similarity=0.164 Sum_probs=188.2
Q ss_pred CCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH----HhHhcCCC--CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeee
Q 021513 59 LPDLSPEYQIHDSESIAKMRAACELAARVLDA----AGKLVRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC 132 (311)
Q Consensus 59 ~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~----~~~~i~pG--~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~ 132 (311)
.+.+..++++|+++|++.||.|----..|+.+ .-..+.-| +||.+++..++++-.+...+-. .+|+++.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 44556678999999999998875443334433 33445667 8999999999988777655432 35999986
Q ss_pred e-cCCCccccCCCC---CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccC-CCch
Q 021513 133 T-SVNECMCHGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKD-GASF 207 (311)
Q Consensus 133 ~-g~n~~~~h~~p~---~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kp-G~~~ 207 (311)
+ |.|.++.|+.|. ++.+.+..+.++|.|+.|.-=.+|++||+.+|+|++++++.|..+.+..-+..++.-| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999986 4589999999999999988889999999999999999999999999999888887765 7888
Q ss_pred hHHHHHHHHHHHHcCCcccccccccccCc--ccccCCccccCCC-CCCccccCCcEEEEcceeecCCCcceecCCCCeee
Q 021513 208 KKIGKRISEHAEKYGFGVVERFVGHGVGK--VFHSEPIIYHNRN-ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTL 284 (311)
Q Consensus 208 ~ei~~~i~~~~~~~G~~~~~~~~GHgIG~--~~he~p~i~~~~~-~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~ 284 (311)
+.+...++..+.+.|.. +.|-+|||||. .+||.|....++. .++..|++||++++||+.|.
T Consensus 454 ~~lD~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~--------------- 517 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK--------------- 517 (606)
T ss_pred chhHHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc---------------
Confidence 89999999999999996 78999999997 7799997665542 45678999999999999986
Q ss_pred ecCCCceEEEeEEEEEcCCCeE
Q 021513 285 TADGNPAAQFEHTILITRTGAE 306 (311)
Q Consensus 285 t~~g~~~~~~EdtvlVt~~G~e 306 (311)
||.+|+|+|+.++|.+.+..
T Consensus 518 --dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 518 --DGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred --cCcceEEEeeEEEEEecccc
Confidence 58899999999999877654
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.84 E-value=2.3e-19 Score=160.63 Aligned_cols=243 Identities=23% Similarity=0.384 Sum_probs=193.0
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHc-C-CccC-CCC--CCCCCCeeeecCCCccc
Q 021513 66 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEA-G-AYPS-PLG--YGGFPKSVCTSVNECMC 140 (311)
Q Consensus 66 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~-G-~~p~-~~~--~~~~~~~v~~g~n~~~~ 140 (311)
..+-++..+..+|.|++|+..++..+.+.+.||.+..||+...+.++.+. | .|.. .-. .-.||+ |+++|.++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 46778899999999999999999999999999999999999999888765 2 2332 111 223665 578999999
Q ss_pred cCCCC----CCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCC-----HHHHHHHHHHHHHHHHHHHHccCCCchhHHH
Q 021513 141 HGIPD----SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVS-----DGLKRLVKVTEECLEKGIAVCKDGASFKKIG 211 (311)
Q Consensus 141 h~~p~----~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~-----~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~ 211 (311)
|+.|- +..|++||+|.||+|+++|||.+-++.|++|+.++ ....++..+++.|.+++++.++||.+-..|-
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99872 56799999999999999999999999999998644 5678999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccccccCccc-ccCCccccCCCC------CCccccCCcEEEEcceeecCCCccee--------
Q 021513 212 KRISEHAEKYGFGVVERFVGHGVGKVF-HSEPIIYHNRNE------NPGCMVEGQTFTIEPILTMGSIECIT-------- 276 (311)
Q Consensus 212 ~~i~~~~~~~G~~~~~~~~GHgIG~~~-he~p~i~~~~~~------~~~~l~~GmvftiEp~i~~~~~~~~~-------- 276 (311)
+++.+.+.++++..+....-|..=..+ ...+.|.....+ +...++++.|+++...++.+......
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~ 250 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTI 250 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCccccccccccee
Confidence 999999999999888877777765533 444555443321 34578899999998777665542110
Q ss_pred ------------------------------------cCC------------------CCee-eecCCCceEEEeEEEEEc
Q 021513 277 ------------------------------------WPD------------------NWTT-LTADGNPAAQFEHTILIT 301 (311)
Q Consensus 277 ------------------------------------~~d------------------~w~~-~t~~g~~~~~~EdtvlVt 301 (311)
++. .+.+ ..++|...+||+.|||..
T Consensus 251 y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~Tvllm 330 (398)
T KOG2776|consen 251 YYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLM 330 (398)
T ss_pred EEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEec
Confidence 000 1112 356789999999999999
Q ss_pred CCCeEeCCC
Q 021513 302 RTGAEILTI 310 (311)
Q Consensus 302 ~~G~e~LT~ 310 (311)
++|.-.||.
T Consensus 331 Png~~~l~~ 339 (398)
T KOG2776|consen 331 PNGSLRLTG 339 (398)
T ss_pred cCCCccccC
Confidence 999888874
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.76 E-value=8.1e-18 Score=159.57 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=181.1
Q ss_pred CCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhHhc----CCC--CcHHHHHHHHHHHHHH----------c
Q 021513 52 PYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLV----RPS--VTTNEIDKAVHQMIIE----------A 115 (311)
Q Consensus 52 ~~~~~~~~~~l~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i----~pG--~te~ei~~~~~~~~~~----------~ 115 (311)
.|...+++.-|..+-.+|+++||+.+|.+++.....|......+ -.+ +|...+...+...+-+ .
T Consensus 154 efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l 233 (1001)
T COG5406 154 EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKL 233 (1001)
T ss_pred hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccc
Confidence 34445566667777899999999999999999998888443322 222 3444444444432221 1
Q ss_pred CC-ccCCCCCCCCCCeeeecCC-CccccCCCCCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHH
Q 021513 116 GA-YPSPLGYGGFPKSVCTSVN-ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 193 (311)
Q Consensus 116 G~-~p~~~~~~~~~~~v~~g~n-~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~ 193 (311)
|- .-..+.+ +|.+++.+|.. ...+.....+..+ .||+|++.+|.+|+|||+.++||+++ +|+.+|++-|+.++.+
T Consensus 234 ~~~~~d~lew-~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~l 310 (1001)
T COG5406 234 GDIDLDQLEW-CYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYML 310 (1001)
T ss_pred cccchhhhhh-hcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHH
Confidence 11 0111222 36667776643 2333344445555 48999999999999999999999999 6799999999999999
Q ss_pred HHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccc---cccccCcccccCCccccCCCCCCccccCCcEEEEcceeecC
Q 021513 194 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMG 270 (311)
Q Consensus 194 ~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~---~GHgIG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~ 270 (311)
+...+..||||...++||..+.+++++.|....++| +|-+||+++.+...+.... ++++|+.||+|.|.-++..
T Consensus 311 Qk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvk--n~r~lq~g~~fnis~gf~n- 387 (1001)
T COG5406 311 QKYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVK--NGRVLQAGCIFNISLGFGN- 387 (1001)
T ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceecc--CCceeccccEEEEeecccc-
Confidence 999999999999999999999999999999887777 7999999999887776653 4589999999999876643
Q ss_pred CCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCCC
Q 021513 271 SIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311 (311)
Q Consensus 271 ~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~~ 311 (311)
+.+... ...+..++-||+-|+-+-+.++|.+
T Consensus 388 ------l~~~~~----~Nnyal~l~dt~qi~ls~p~~~t~~ 418 (1001)
T COG5406 388 ------LINPHP----KNNYALLLIDTEQISLSNPIVFTDS 418 (1001)
T ss_pred ------cCCCCc----ccchhhhhccceEeecCCceecccC
Confidence 112211 2457889999999998889998864
No 39
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.72 E-value=0.00035 Score=66.44 Aligned_cols=117 Identities=10% Similarity=0.143 Sum_probs=81.8
Q ss_pred cEEeeeeeeEEccCCC--HHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc-ccccccc--ccCcccc
Q 021513 165 GYHGDTSKTFLCGNVS--DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH--GVGKVFH 239 (311)
Q Consensus 165 Gy~~D~~RT~~vG~~~--~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~-~~~~~GH--gIG~~~h 239 (311)
..++++.++..|..+. +.++++.+.+.++++++.+.+|||++-.||..++++.+.++|... ..++.+. ++...
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts-- 203 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTS-- 203 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeec--
Confidence 3456777788886654 456789999999999999999999999999999999988876432 1111111 11111
Q ss_pred cCCccccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 240 SEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 240 e~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
....+.|+. .++..|++|+++.|+.+.+. .++.+-+..|++|.+
T Consensus 204 ~N~~i~Hgi-p~~r~L~~GDiV~iDvg~~~------------------~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 204 VNEVICHGI-PDARKLEDGDIVNVDVTVYY------------------KGCHGDLNETFFVGN 247 (396)
T ss_pred ccccccCCC-CCCccCCCCCEEEEEEeEEE------------------CCEEEeEEeEEEcCC
Confidence 112234432 24568999999999998875 345678899999864
No 40
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.71 E-value=0.00057 Score=60.41 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccc-cccccccCcccccCCccccCCCCCCccccCCc
Q 021513 181 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE-RFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 259 (311)
Q Consensus 181 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~-~~~GHgIG~~~he~p~i~~~~~~~~~~l~~Gm 259 (311)
+.++++.+.+.++++++++.++||++-.||..++++.+.++|..... .+.++...........+.|+. ..+.+|++|+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~-~~~~~l~~Gd 80 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGI-PDDRVLKDGD 80 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCC-CCCcccCCCC
Confidence 35788999999999999999999999999999999999999975311 001110000000111123322 2457899999
Q ss_pred EEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 260 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 260 vftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
++.++.+... +++.+.+..|+.|.+
T Consensus 81 ~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 81 IVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred EEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 9999998754 346778999999865
No 41
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.51 E-value=0.0018 Score=55.14 Aligned_cols=102 Identities=23% Similarity=0.249 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCe
Q 021513 75 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 154 (311)
Q Consensus 75 ~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~ 154 (311)
+.+|++.+.+.++++.+.+.++||++..||...+.+.+.++|........ +...+.....+...-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~--~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHR--TGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCC--CccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 57888999999999999999999999999999999999999874211111 1111211111111101124678999999
Q ss_pred EEEEeeeeeC-cEEeeeeeeEEccC
Q 021513 155 INIDVTVYLN-GYHGDTSKTFLCGN 178 (311)
Q Consensus 155 v~iD~g~~~~-Gy~~D~~RT~~vG~ 178 (311)
+.++.+.... ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999877 58889999999854
No 42
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.47 E-value=0.0015 Score=59.79 Aligned_cols=97 Identities=11% Similarity=0.141 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCC--CCCccccCC
Q 021513 181 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN--ENPGCMVEG 258 (311)
Q Consensus 181 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~--~~~~~l~~G 258 (311)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|.. .++..+.... ....|+.+ +++..|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~-----~afp~~is~n--~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG-----PAFPVNLSIN--ECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-----CCCCceeccC--CEeeCCCCCCCCCcccCCC
Confidence 35788899999999999999999999999999999999999854 1222222221 12233322 345789999
Q ss_pred cEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 259 QTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 259 mvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
+++.|+.+... .++.+-...|+.+.+
T Consensus 75 DvV~iD~G~~~------------------dGY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV------------------DGYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE------------------CCEEEEEEEEEecCh
Confidence 99999998865 234566677777653
No 43
>PRK05716 methionine aminopeptidase; Validated
Probab=97.32 E-value=0.0031 Score=56.15 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccc-cccccccCcccccCCccccCCCCCCccccCCcE
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE-RFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQT 260 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~-~~~GHgIG~~~he~p~i~~~~~~~~~~l~~Gmv 260 (311)
.++++.+.+.++++.+++.++||++-.||..++++.+.+.|..... .+.++.--......-.+.|+. .++..|++|++
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~-~~~~~l~~Gd~ 91 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGI-PSDKVLKEGDI 91 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCC-CCCcccCCCCE
Confidence 4578888899999999999999999999999999999998875211 011111000000011122332 24578999999
Q ss_pred EEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEc
Q 021513 261 FTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 301 (311)
Q Consensus 261 ftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt 301 (311)
+.++.+... +++.+-+.-|+.|.
T Consensus 92 v~id~g~~~------------------~gY~~d~~RT~~vG 114 (252)
T PRK05716 92 VNIDVTVIK------------------DGYHGDTSRTFGVG 114 (252)
T ss_pred EEEEEEEEE------------------CCEEEEeEEEEECC
Confidence 999998765 34567788888774
No 44
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.26 E-value=0.0049 Score=52.95 Aligned_cols=100 Identities=27% Similarity=0.338 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCC-CCCCCCCCC
Q 021513 75 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQDGD 153 (311)
Q Consensus 75 ~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~Gd 153 (311)
+.+|++.+.+.++++.+.+.++||++-.||.+.+.+.+.+.|..+......|+ .+.....+. +.-.+ ++.+|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~-p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH--GVGLEVHEA-PYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCcC-CCcCCCCCCCcCCCC
Confidence 36678889999999999999999999999999999999999974321111111 111111111 11112 467899999
Q ss_pred eEEEEeeeeeCcE-EeeeeeeEEcc
Q 021513 154 IINIDVTVYLNGY-HGDTSKTFLCG 177 (311)
Q Consensus 154 ~v~iD~g~~~~Gy-~~D~~RT~~vG 177 (311)
++.|+.+....|+ ..-+.-|++|.
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999988876443 44567888874
No 45
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.25 E-value=0.0034 Score=55.99 Aligned_cols=111 Identities=10% Similarity=0.141 Sum_probs=74.2
Q ss_pred eeeEEccCCCH--HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccccc-ccccc--cCcccccCCccc
Q 021513 171 SKTFLCGNVSD--GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVER-FVGHG--VGKVFHSEPIIY 245 (311)
Q Consensus 171 ~RT~~vG~~~~--~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~-~~GHg--IG~~~he~p~i~ 245 (311)
.|++.+-.+.+ .++++.+.+.++.+.+++.++||++-.||...++..+.+.|...... ..++. +.... ...+.
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--n~~~~ 82 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISV--NEEVA 82 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecC--CCeeE
Confidence 57777744333 45678888888899999999999999999999999999998763111 11111 11111 11123
Q ss_pred cCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 246 HNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 246 ~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
|+. .++.+|++|+++.++.+... +++.+-+.-|+++.+
T Consensus 83 h~~-p~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 83 HGI-PGPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred ecC-CCCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 332 23468999999999988764 345667778887753
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.04 E-value=0.011 Score=52.53 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCc--cccCC--CCCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHGI--PDSRQLQD 151 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~--~~h~~--p~~~~l~~ 151 (311)
..|++.+++.++++++++.++||++-.|+...+.+.+.+.|..+. ..+.|+ .+.....+. ++++. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777888889999999999999999999999999999987652 122222 222222221 12211 13678999
Q ss_pred CCeEEEEeeeee------------------CcEEeeeeeeEEccC
Q 021513 152 GDIINIDVTVYL------------------NGYHGDTSKTFLCGN 178 (311)
Q Consensus 152 Gd~v~iD~g~~~------------------~Gy~~D~~RT~~vG~ 178 (311)
|.++.|+-+.+. +++..-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988765 245666778888854
No 47
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=97.02 E-value=0.0092 Score=53.15 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc-cccccc--cccCcccccCCccccCCCCCCccccCC
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVG--HGVGKVFHSEPIIYHNRNENPGCMVEG 258 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~-~~~~~G--HgIG~~~he~p~i~~~~~~~~~~l~~G 258 (311)
.++++-+.+.++++.+.+.++||++..||.+.+++++.++|.-. ..++-| -.+..++ +-.+.|+-++++.+|++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSv--Ne~v~HgiP~d~~vlk~G 90 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISV--NEVVAHGIPGDKKVLKEG 90 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeeh--hheeeecCCCCCcccCCC
Confidence 45677777888898999999999999999999999999866532 111112 2222222 112334433467899999
Q ss_pred cEEEEcceeec
Q 021513 259 QTFTIEPILTM 269 (311)
Q Consensus 259 mvftiEp~i~~ 269 (311)
.++.|..++..
T Consensus 91 Div~IDvg~~~ 101 (255)
T COG0024 91 DIVKIDVGAHI 101 (255)
T ss_pred CEEEEEEEEEE
Confidence 99999998876
No 48
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.00 E-value=0.0044 Score=55.53 Aligned_cols=86 Identities=14% Similarity=0.302 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcc-ccccccc--ccCcccccCCccccCCCCCCccccCC
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH--GVGKVFHSEPIIYHNRNENPGCMVEG 258 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~-~~~~~GH--gIG~~~he~p~i~~~~~~~~~~l~~G 258 (311)
.++++.+.++++++.|...+|||++..||++++++.+-++|.-+ .-++.|. ++-..+ +-.|.|.- .+.+.||.|
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSV--NEviCHGI-PD~RpLedG 200 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSV--NEVICHGI-PDSRPLEDG 200 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcch--hheeecCC-CCcCcCCCC
Confidence 46778888999999999999999999999999999988877532 1111111 111111 11122321 356799999
Q ss_pred cEEEEcceeecC
Q 021513 259 QTFTIEPILTMG 270 (311)
Q Consensus 259 mvftiEp~i~~~ 270 (311)
.++.|+..+|..
T Consensus 201 DIvNiDVtvY~~ 212 (369)
T KOG2738|consen 201 DIVNIDVTVYLN 212 (369)
T ss_pred CEEeEEEEEEec
Confidence 999999999873
No 49
>PRK15173 peptidase; Provisional
Probab=96.94 E-value=0.012 Score=54.65 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCC-CCCCCCCCCCe
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI-PDSRQLQDGDI 154 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~-p~~~~l~~Gd~ 154 (311)
..|++.+++.++++++++.++||++-.||...+.+.+.+.|.......+.|....+..|..+. +... .++.+|++|.+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCE
Confidence 457788889999999999999999999999999999999986432211111111111122221 1111 24578999999
Q ss_pred EEEEeeeeeCc-EEeeeeeeEEccC
Q 021513 155 INIDVTVYLNG-YHGDTSKTFLCGN 178 (311)
Q Consensus 155 v~iD~g~~~~G-y~~D~~RT~~vG~ 178 (311)
+.|+-+.+..| +..-+..|++|.+
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEcC
Confidence 99999876443 3356789998843
No 50
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.85 E-value=0.014 Score=51.87 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC--ccCCCCCCCCCCeeeecCCCccccCCC-CCCCCCC
Q 021513 75 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA--YPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQD 151 (311)
Q Consensus 75 ~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~--~p~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~ 151 (311)
+..|++.+++.++.+++++.++||++-.|+...+.+.+.+.+. .+... ++....+.....+....-.| ++++|++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~--~~~GHgiGle~hE~~~~l~~~~~~~L~~ 196 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFT--KNLGFGIGLEFRESSLIINAKNDRKLKK 196 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCc--CCcccccCcccccCccccCCCCCCCcCC
Confidence 3567788899999999999999999999999999999988762 21110 11111222222232111112 3578999
Q ss_pred CCeEEEEeeee-e----------CcEEeeeeeeEEccC
Q 021513 152 GDIINIDVTVY-L----------NGYHGDTSKTFLCGN 178 (311)
Q Consensus 152 Gd~v~iD~g~~-~----------~Gy~~D~~RT~~vG~ 178 (311)
|.++.|..|.. + +.|..-++-|++|.+
T Consensus 197 GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 197 GMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 99999999986 3 257888999999954
No 51
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.83 E-value=0.012 Score=52.44 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCC--ccccCC-C-CCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGI-P-DSRQLQD 151 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~--~~~h~~-p-~~~~l~~ 151 (311)
..|++.+++.++++.+++.++||++..|+..++.+.+.+.|.... .++.|+ .+..+..+ .+.++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 356666888899999999999999999999999999999986532 122221 22222222 112221 2 3457999
Q ss_pred CCeEEEEeeee-----------------eCc-EEeeeeeeEEccC
Q 021513 152 GDIINIDVTVY-----------------LNG-YHGDTSKTFLCGN 178 (311)
Q Consensus 152 Gd~v~iD~g~~-----------------~~G-y~~D~~RT~~vG~ 178 (311)
|.++.+.-+.+ .+| +..-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99999998876 244 6777888888854
No 52
>PRK14575 putative peptidase; Provisional
Probab=96.80 E-value=0.016 Score=55.49 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeee--ecCCCc--cccCCCCCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC--TSVNEC--MCHGIPDSRQLQD 151 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~--~g~n~~--~~h~~p~~~~l~~ 151 (311)
..|++.+++.++.+++++.++||++-.||.+.+.+.+.+.|....+..+ +...+. .|..+. +.+ -++.+|++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~P~i~~--~~~~~Le~ 361 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVST--HATESFTS 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccCCCCCC--CCCCCcCC
Confidence 4567788888999999999999999999999999999998864322111 111222 122221 111 24578999
Q ss_pred CCeEEEEeeeeeCc-EEeeeeeeEEccC
Q 021513 152 GDIINIDVTVYLNG-YHGDTSKTFLCGN 178 (311)
Q Consensus 152 Gd~v~iD~g~~~~G-y~~D~~RT~~vG~ 178 (311)
|.++.+.-+.+..| +..-+..|++|.+
T Consensus 362 GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 362 GMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 99999998887544 3466889999954
No 53
>PRK14576 putative endopeptidase; Provisional
Probab=96.79 E-value=0.018 Score=55.14 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeee--ecCCCccccCCC-CCCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC--TSVNECMCHGIP-DSRQLQDG 152 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~--~g~n~~~~h~~p-~~~~l~~G 152 (311)
..|++.+++.++.+++++.++||++-.||...+.+.+.+.|.......+.| ..+. .|..+. +...+ ++.+|++|
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~G--HgiG~~l~~~e~-P~i~~~~~~~Le~G 361 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLG--HGDGVFLGLEEV-PFVSTQATETFCPG 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCC--CCCCCCCCcCcC-CCcCCCCCCccCCC
Confidence 466788888999999999999999999999999999999986432212111 1222 232222 22222 45789999
Q ss_pred CeEEEEeeeeeCc-EEeeeeeeEEccC
Q 021513 153 DIINIDVTVYLNG-YHGDTSKTFLCGN 178 (311)
Q Consensus 153 d~v~iD~g~~~~G-y~~D~~RT~~vG~ 178 (311)
.++.++.+.+..| ...-+..|++|.+
T Consensus 362 Mv~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 362 MVLSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred CEEEECCceeecCCCEEEEeeEEEECC
Confidence 9999997766444 3345788998843
No 54
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.78 E-value=0.026 Score=51.64 Aligned_cols=97 Identities=22% Similarity=0.259 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCC-----ccccCC-CCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-----CMCHGI-PDSRQL 149 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~-----~~~h~~-p~~~~l 149 (311)
..+++.+.+.++++.+++.++||++-.||.+.+++.+.+.|..+. .+..|+ . .|.+. .++... .++.+|
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GH--g--iG~~~~he~p~ip~~~~~~~~~l 176 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGH--G--LERYELHAGPSIPNYDEGGGVKL 176 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCccc--C--cCCCcccCCCccCccCCCCCcee
Confidence 456788888899999999999999999999999999999998663 122221 1 22110 111111 235789
Q ss_pred CCCCeEEEEeeee-eCcEEeeeeeeEEcc
Q 021513 150 QDGDIINIDVTVY-LNGYHGDTSKTFLCG 177 (311)
Q Consensus 150 ~~Gd~v~iD~g~~-~~Gy~~D~~RT~~vG 177 (311)
++|+++.|+.... -.|+..|-.+|-+..
T Consensus 177 e~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 177 EEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 9999999998765 468888888777764
No 55
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.78 E-value=0.023 Score=50.02 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccC-----C-CCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHG-----I-PDSRQL 149 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~-----~-p~~~~l 149 (311)
..|++.+++.++++++.+.++||++-.||++++.+.+.++|...... +++...+.....+. +|. . .++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 36778889999999999999999999999999999999998654211 11222222222221 111 1 135789
Q ss_pred CCCCeEEEEeeeeeC----c-EEeeeeeeEEccC
Q 021513 150 QDGDIINIDVTVYLN----G-YHGDTSKTFLCGN 178 (311)
Q Consensus 150 ~~Gd~v~iD~g~~~~----G-y~~D~~RT~~vG~ 178 (311)
++|.++.++-+.++. | .-.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999988752 2 2333788888854
No 56
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.70 E-value=0.021 Score=49.14 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHH-HHHcCCcccccccccccCcccccCCccccCCCCCCccccCCc
Q 021513 181 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEH-AEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 259 (311)
Q Consensus 181 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~-~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~Gm 259 (311)
+..+++.+.+.++++++++.++||++-.||...+.+. +.+.|.....+..-=+.|. ...+.++. .++..|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~----~~~~~~~~-~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGP----NTDLPHYT-PTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECC----CCGETTTB-CCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCC----cceeccee-ccceeeecCC
Confidence 3568889999999999999999999999999999998 6777754221111111221 11122332 2467899999
Q ss_pred EEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEc
Q 021513 260 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 301 (311)
Q Consensus 260 vftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt 301 (311)
++.++-+... +++.+.+..|+++.
T Consensus 76 ~v~id~~~~~------------------~gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 76 IVIIDFGPRY------------------DGYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEEE------------------TTEEEEEEEEEESS
T ss_pred cceeecccee------------------eeeEeeeeeEEEEe
Confidence 9999987754 34566777787663
No 57
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.70 E-value=0.024 Score=53.91 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccccc--ccccccCc--ccccCCccccCCC---CCCcc
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVER--FVGHGVGK--VFHSEPIIYHNRN---ENPGC 254 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~--~~GHgIG~--~~he~p~i~~~~~---~~~~~ 254 (311)
.++++-+.+..+++.+++.++||++..||.+.+++.+++.+-..+.. ...+|++. .+.-+-.+.|+.+ +++..
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 35677778888899999999999999999999999998864322111 11122221 0111222334432 23478
Q ss_pred ccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 255 MVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 255 l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
|++|.++.|+-+... .++.+-..+|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 999999999998876 346778899999974
No 58
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.67 E-value=0.018 Score=54.86 Aligned_cols=99 Identities=15% Similarity=0.220 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCc----cccCCC-CCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC----MCHGIP-DSRQLQ 150 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~----~~h~~p-~~~~l~ 150 (311)
.+|++.+++.++.+++++.++||+|-.||++.+.+.+.+.|.... ...|++ +..+.... .+.-.| ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee--eccCcCCCCCCccccccCCCCceec
Confidence 466788899999999999999999999999999999999986531 112221 11111100 011112 357899
Q ss_pred CCCeEEEEeeeeeCcEEeeeeeeEEccC
Q 021513 151 DGDIINIDVTVYLNGYHGDTSKTFLCGN 178 (311)
Q Consensus 151 ~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~ 178 (311)
+|.++.+.-+.+..|+..-+.-|++|.+
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 9999999999988877677888999853
No 59
>PRK09795 aminopeptidase; Provisional
Probab=96.65 E-value=0.031 Score=52.64 Aligned_cols=105 Identities=22% Similarity=0.226 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCC-CCCC
Q 021513 70 DSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQ 148 (311)
Q Consensus 70 s~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~ 148 (311)
.+++.+.++++.+++.++.+++.+.++||++-.||++.+.+.+.+.|....... +....+.....+. +.-.| ++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h--~~GHgiGl~~he~-p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGH--NTGHAIGIEVHED-PRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCC--CCCccCCccccCC-CCcCCCCCCC
Confidence 355556788899999999999999999999999999999999999986432111 1111222221111 11112 3578
Q ss_pred CCCCCeEEEEeeeeeCcE-EeeeeeeEEcc
Q 021513 149 LQDGDIINIDVTVYLNGY-HGDTSKTFLCG 177 (311)
Q Consensus 149 l~~Gd~v~iD~g~~~~Gy-~~D~~RT~~vG 177 (311)
|++|.++.|+-+.+..|. ..-+.-|++|.
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 999999999999876653 35567888884
No 60
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.63 E-value=0.024 Score=51.79 Aligned_cols=86 Identities=19% Similarity=0.267 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCc--cccCCC-CCCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHGIP-DSRQLQDG 152 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~--~~h~~p-~~~~l~~G 152 (311)
..|++.+++.++++++++.++||++-.||...+.+.+.+.|..... .+.|+ .+.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~-~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVD-QFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCC-CcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 4567888899999999999999999999999999999999865321 12222 222222221 222222 24679999
Q ss_pred CeEEEEeeeeeC
Q 021513 153 DIINIDVTVYLN 164 (311)
Q Consensus 153 d~v~iD~g~~~~ 164 (311)
.++.|+-+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999877654
No 61
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.57 E-value=0.031 Score=49.51 Aligned_cols=102 Identities=18% Similarity=0.170 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcC----Ccc------------CCCCCCCCCCeeeecCCCcc
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG----AYP------------SPLGYGGFPKSVCTSVNECM 139 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G----~~p------------~~~~~~~~~~~v~~g~n~~~ 139 (311)
..+++.+.+.++++++++.++||++-.||...+.+.+.+.+ ..+ .....+++...+.....+.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~- 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDV- 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccC-
Confidence 45677788889999999999999999999999999887653 211 0110111222222222221
Q ss_pred ccC--CC-CCCCCCCCCeEEEEeeeeeCc-----------EEeeeeeeEEccC
Q 021513 140 CHG--IP-DSRQLQDGDIINIDVTVYLNG-----------YHGDTSKTFLCGN 178 (311)
Q Consensus 140 ~h~--~p-~~~~l~~Gd~v~iD~g~~~~G-----------y~~D~~RT~~vG~ 178 (311)
++. .+ ++.+|++|.++.+.-+.+..+ +..-+.-|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 211 22 357899999999999988654 6677788998843
No 62
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.53 E-value=0.027 Score=51.41 Aligned_cols=85 Identities=11% Similarity=0.122 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCc--cccC-CC-CCCCCCC
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHG-IP-DSRQLQD 151 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~--~~h~-~p-~~~~l~~ 151 (311)
..|++.+++.++++++++.++||++-.||+.++.+.+.++|... ...+.|+ .+.....+. ++++ .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 35788999999999999999999999999999999999887643 2122221 111111121 2222 12 3467999
Q ss_pred CCeEEEEeeeee
Q 021513 152 GDIINIDVTVYL 163 (311)
Q Consensus 152 Gd~v~iD~g~~~ 163 (311)
|.++.|.-+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999988864
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.41 E-value=0.055 Score=49.56 Aligned_cols=96 Identities=8% Similarity=0.072 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCC--CCCccccCCc
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN--ENPGCMVEGQ 259 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~--~~~~~l~~Gm 259 (311)
..+++-+.+..+++.+++.++||++..||.+.+++.+.+.|... .| ...|.. .....|+.+ +++..|++|.
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aF-p~~vs~----n~~~~H~~p~~~d~~~l~~GD 79 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AF-PCNISI----NECAAHFTPKAGDKTVFKDGD 79 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CC-Ccceec----CCEeeCCCCCCCcCccCCCCC
Confidence 46778888899999999999999999999999999999998652 11 001111 111222221 2456899999
Q ss_pred EEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 260 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 260 vftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
++.|+.+... .++.+-...|+.+.+
T Consensus 80 vV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 80 VVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred EEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 9999988765 235677788888754
No 64
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.26 E-value=0.089 Score=46.18 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCccccc--ccccccCcc--cccCCccccCCC---CCCcc
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVER--FVGHGVGKV--FHSEPIIYHNRN---ENPGC 254 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~--~~GHgIG~~--~he~p~i~~~~~---~~~~~ 254 (311)
..+++.+.+.++++.+++.++||++-.||...+++.+.+..-..++. ....+++.. +--...+.|+.+ .++..
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~~ 82 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATYT 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCcc
Confidence 56888899999999999999999999999888888887743221111 111111110 000111222221 25568
Q ss_pred ccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513 255 MVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 302 (311)
Q Consensus 255 l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~ 302 (311)
|++|+++.|+.+... .++.+-+..|+.|.+
T Consensus 83 l~~Gd~v~iD~g~~~------------------~GY~sD~tRT~~vG~ 112 (228)
T cd01089 83 LKDGDVVKIDLGCHI------------------DGYIAVVAHTIVVGA 112 (228)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEeCC
Confidence 999999999988764 245677888888864
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.52 E-value=0.17 Score=48.02 Aligned_cols=97 Identities=27% Similarity=0.293 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCC------CCCCCC
Q 021513 77 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP------DSRQLQ 150 (311)
Q Consensus 77 ~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p------~~~~l~ 150 (311)
.|+...++.++.+++.+.++||+|-.|++..+.+.+.++|...... +++...+. ...-.|-.| ++.+|+
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG---~~l~vhE~p~~~~~~~~~~L~ 338 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVG---FVLDVHEHPQYLSPGSDTTLE 338 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCC---CCcccCcCccccCCCCCcccc
Confidence 4577889999999999999999999999999999999976543221 11222222 011123222 467899
Q ss_pred CCCeEEEEeeeee-CcEEeeeeeeEEccC
Q 021513 151 DGDIINIDVTVYL-NGYHGDTSKTFLCGN 178 (311)
Q Consensus 151 ~Gd~v~iD~g~~~-~Gy~~D~~RT~~vG~ 178 (311)
+|-++.++-|.++ +.+-.-+..+++|.+
T Consensus 339 ~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 339 PGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999999774 568899999999965
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.49 E-value=0.19 Score=48.84 Aligned_cols=96 Identities=15% Similarity=0.165 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHc----CCcccccccccccCcccccCCccccCCC--CCCcccc
Q 021513 183 LKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY----GFGVVERFVGHGVGKVFHSEPIIYHNRN--ENPGCMV 256 (311)
Q Consensus 183 ~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~----G~~~~~~~~GHgIG~~~he~p~i~~~~~--~~~~~l~ 256 (311)
++++-+.+..+++.+.+.++||++..||.+.+++.+.+. |...-..| .-++++. -..+|+.+ +++.+|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N----~~aaH~tP~~gd~~vLk 235 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLN----HCAAHYTPNTGDKTVLT 235 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecC----ccccCCCCCCCCCcEec
Confidence 566777778888888899999999999999887766543 43211111 0122221 11223322 2457899
Q ss_pred CCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEc
Q 021513 257 EGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 301 (311)
Q Consensus 257 ~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt 301 (311)
.|.++.|+-+... .++.+-+..|+.+.
T Consensus 236 ~GDvVkID~G~~v------------------dGYiaD~ArTv~vg 262 (470)
T PTZ00053 236 YDDVCKLDFGTHV------------------NGRIIDCAFTVAFN 262 (470)
T ss_pred CCCeEEEEEeEEE------------------CCEEEeEEEEEEeC
Confidence 9999999998765 23456677787774
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=94.63 E-value=0.46 Score=46.06 Aligned_cols=101 Identities=16% Similarity=0.249 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH----HcCCccCC-------CCC-CCCCCee----eecCCCccc
Q 021513 77 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSP-------LGY-GGFPKSV----CTSVNECMC 140 (311)
Q Consensus 77 ~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~----~~G~~p~~-------~~~-~~~~~~v----~~g~n~~~~ 140 (311)
.|++.+++.++.+++++.++||++-.+|...+.+.+. +.|.-+.. .++ ..|+..+ .....+. +
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~-~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDV-G 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcC-C
Confidence 4567778888999999999999999999988876543 33432110 000 0122222 1111111 1
Q ss_pred cCCC-CCCCCCCCCeEEEEeeeeeC----------cEEeeeeeeEEccC
Q 021513 141 HGIP-DSRQLQDGDIINIDVTVYLN----------GYHGDTSKTFLCGN 178 (311)
Q Consensus 141 h~~p-~~~~l~~Gd~v~iD~g~~~~----------Gy~~D~~RT~~vG~ 178 (311)
+..+ ++++|++|.++.|.-|.++. |+..-+.-|++|.+
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 2112 35789999999999998753 56677888999853
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=91.78 E-value=4.3 Score=35.50 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhHhc-CCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeee--ecCCCc--cccCCCCCCCCCCCC
Q 021513 79 AACELAARVLDAAGKLV-RPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC--TSVNEC--MCHGIPDSRQLQDGD 153 (311)
Q Consensus 79 ~A~~ia~~~l~~~~~~i-~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~--~g~n~~--~~h~~p~~~~l~~Gd 153 (311)
++..++.++..++.+.+ +||++-.++++.+.+.+.+.|.+-. +.....+. ....+. +.+...++++|++|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~----h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gm 190 (224)
T cd01085 115 RDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG----HGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGM 190 (224)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC----CCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCC
Confidence 34445555566666666 5999999999999999998886410 00111121 111221 110112357899999
Q ss_pred eEEEEeeeeeC-cEEeeeeeeEEcc
Q 021513 154 IINIDVTVYLN-GYHGDTSKTFLCG 177 (311)
Q Consensus 154 ~v~iD~g~~~~-Gy~~D~~RT~~vG 177 (311)
++.|+-+.+.. ....-+..|++|.
T Consensus 191 vftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 191 ILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred EEEECCEeEeCCCeEEEeeEEEEEe
Confidence 99999998864 4556688888884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=90.93 E-value=1.7 Score=42.24 Aligned_cols=88 Identities=19% Similarity=0.227 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHH----HHcCCccC-------CCCC--CCCCCe----eeecCCCccc
Q 021513 78 RAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMI----IEAGAYPS-------PLGY--GGFPKS----VCTSVNECMC 140 (311)
Q Consensus 78 R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~----~~~G~~p~-------~~~~--~~~~~~----v~~g~n~~~~ 140 (311)
++..+++.++.+++++.++||++-.||...+++.+ .+.|.... ..++ ..||.. +...+.+.-.
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 46788899999999999999999999998887655 44554321 0000 012222 2222222200
Q ss_pred c-------------CCC---CCCCCCCCCeEEEEeeeeeCc
Q 021513 141 H-------------GIP---DSRQLQDGDIINIDVTVYLNG 165 (311)
Q Consensus 141 h-------------~~p---~~~~l~~Gd~v~iD~g~~~~G 165 (311)
+ ..| +.++|++|.++.|+-|+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 351 FMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred cccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0 001 347899999999999988764
No 70
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=86.99 E-value=3.8 Score=38.14 Aligned_cols=93 Identities=22% Similarity=0.319 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHc-------------CCcc-----cccccccccCcccccCCc
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY-------------GFGV-----VERFVGHGVGKVFHSEPI 243 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~-------------G~~~-----~~~~~GHgIG~~~he~p~ 243 (311)
..+.+=+.+..++...++.|+||++..||-......+.+. |... +.+..+ |-.|.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~-------h~sPl 95 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVC-------HFSPL 95 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceee-------ccCcC
Confidence 3455667778888888999999999999875554444322 2211 111222 22333
Q ss_pred cccCCCCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCC
Q 021513 244 IYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRT 303 (311)
Q Consensus 244 i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~ 303 (311)
. ++.+.+|++|.++-|.-++.+ || +.+-+.||++|++.
T Consensus 96 k----sd~~~~Lk~GDvVKIdLG~Hi---------DG---------fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 96 K----SDADYTLKEGDVVKIDLGVHI---------DG---------FIALVAHTIVVGPA 133 (398)
T ss_pred C----CCCcccccCCCEEEEEeeeee---------cc---------ceeeeeeeEEeccC
Confidence 2 234679999999999988876 33 45778999999864
No 71
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=73.30 E-value=53 Score=30.13 Aligned_cols=84 Identities=14% Similarity=0.191 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHH----HcCCcccccccccccCccc-ccCCccccCCCCCCcccc
Q 021513 182 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAE----KYGFGVVERFVGHGVGKVF-HSEPIIYHNRNENPGCMV 256 (311)
Q Consensus 182 ~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~----~~G~~~~~~~~GHgIG~~~-he~p~i~~~~~~~~~~l~ 256 (311)
+.++..++-+.+.+..-..+|||+++-||.+.++...+ +.|.. .-.|...|..+ |+.-...++ .++..+|+
T Consensus 87 d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cAAHyTpN-aGd~tVLq 162 (397)
T KOG2775|consen 87 DLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCAAHYTPN-AGDKTVLK 162 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchhhhcCCC-CCCceeee
Confidence 45566666677777888899999999999988776555 44554 12333333322 222211111 25668999
Q ss_pred CCcEEEEcceeec
Q 021513 257 EGQTFTIEPILTM 269 (311)
Q Consensus 257 ~GmvftiEp~i~~ 269 (311)
.+.|.-|.-+...
T Consensus 163 ydDV~KiDfGthi 175 (397)
T KOG2775|consen 163 YDDVMKIDFGTHI 175 (397)
T ss_pred ecceEEEeccccc
Confidence 9999999877654
No 72
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=70.94 E-value=22 Score=36.52 Aligned_cols=101 Identities=20% Similarity=0.237 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCc--cCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCe
Q 021513 77 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAY--PSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 154 (311)
Q Consensus 77 ~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~--p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~ 154 (311)
|.++....-.+.+++...++||.+-.+|-..+...+.+.+-. |...--.||...+-.-.++.+... -+++.|++|++
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~ina-Knd~~lk~gmv 337 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINA-KNDRVLKKGMV 337 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccc-cchhhhccCcE
Confidence 556777777788888899999999999999999999887632 211000112111111122222221 25689999999
Q ss_pred EEEEeeee-------eCcEEeeeeeeEEccC
Q 021513 155 INIDVTVY-------LNGYHGDTSKTFLCGN 178 (311)
Q Consensus 155 v~iD~g~~-------~~Gy~~D~~RT~~vG~ 178 (311)
.+|.+|.. -+-|.--++-|+.||+
T Consensus 338 Fni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 338 FNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred EEEeeccccccCcccccchhhhccceeeecC
Confidence 99999843 3347777899999986
No 73
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=62.91 E-value=27 Score=24.94 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=32.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCC-ccccCCCCCCCCCCCCeEEE
Q 021513 95 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHGIPDSRQLQDGDIINI 157 (311)
Q Consensus 95 i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~-~~~h~~p~~~~l~~Gd~v~i 157 (311)
++.|.|-.|++..++..+.+.=.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4679999999999998776542221 1111111 11222356788999999986
No 74
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=62.58 E-value=63 Score=27.46 Aligned_cols=74 Identities=18% Similarity=0.170 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCCCCCccccCCc
Q 021513 180 SDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 259 (311)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~~~~~~l~~Gm 259 (311)
.++++..-..+.+-..+.++..-|..+..+.-+.+++.+.+..- .+|.-|-+|- -.+|.. ++ =+.|+
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GA----iRYVva---d~---gekgl 180 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGA----IRYVVA---DN---GEKGL 180 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCc----eEEEEe---cC---CCcee
Confidence 36677777777778888889999999999999999998887533 4566677773 123332 11 17899
Q ss_pred EEEEcce
Q 021513 260 TFTIEPI 266 (311)
Q Consensus 260 vftiEp~ 266 (311)
+|+|||.
T Consensus 181 TFAVEPI 187 (200)
T PF07305_consen 181 TFAVEPI 187 (200)
T ss_pred EEEeeee
Confidence 9999995
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=55.61 E-value=33 Score=24.93 Aligned_cols=52 Identities=29% Similarity=0.303 Sum_probs=38.4
Q ss_pred CCCCCCCCeEEEEeeeee-CcEEeeee------eeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCc
Q 021513 146 SRQLQDGDIINIDVTVYL-NGYHGDTS------KTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGAS 206 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g~~~-~Gy~~D~~------RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~ 206 (311)
++..++||.|.+++.+.. +|-.-|.+ .+|.+|... ...+++.++..+++|-+
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~---------~i~g~e~al~~m~~Ge~ 60 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ---------VIPGLEEALIGMKVGEK 60 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS---------SSHHHHHHHTTSBTTEE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc---------cccchhhhcccccCCCE
Confidence 356889999999999986 88877777 677777521 23467777778888853
No 76
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=44.49 E-value=66 Score=22.59 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHc
Q 021513 179 VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 221 (311)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~ 221 (311)
.+.+++.+++.+.+.+..++..++.|.+..=+...++.+.+..
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L 52 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALESL 52 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999987776666666665553
No 77
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=42.97 E-value=49 Score=19.72 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH
Q 021513 80 ACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII 113 (311)
Q Consensus 80 A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~ 113 (311)
.|.+...++..+...+....|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4677888899999999999999999999988764
No 78
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=41.55 E-value=98 Score=31.44 Aligned_cols=82 Identities=24% Similarity=0.234 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeee--cCCC---ccccCCCC
Q 021513 71 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCT--SVNE---CMCHGIPD 145 (311)
Q Consensus 71 ~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~--g~n~---~~~h~~p~ 145 (311)
.+....|..+..+ -+.....++||.+-.+|-..+..++.+.|-+-.+ .|-..+.+ |... ..+...-+
T Consensus 298 ~e~~~Ny~fl~~l----Qk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn 369 (1001)
T COG5406 298 SEQQKNYEFLYML----QKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKN 369 (1001)
T ss_pred hHhhhhHHHHHHH----HHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccC
Confidence 3444455544433 3445568999999999999999999988743211 12222222 2111 11222235
Q ss_pred CCCCCCCCeEEEEee
Q 021513 146 SRQLQDGDIINIDVT 160 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g 160 (311)
+|+||.|++++|.+|
T Consensus 370 ~r~lq~g~~fnis~g 384 (1001)
T COG5406 370 GRVLQAGCIFNISLG 384 (1001)
T ss_pred CceeccccEEEEeec
Confidence 689999999999986
No 79
>PRK01490 tig trigger factor; Provisional
Probab=41.28 E-value=92 Score=30.01 Aligned_cols=45 Identities=22% Similarity=0.421 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcEE
Q 021513 99 VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYH 167 (311)
Q Consensus 99 ~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~ 167 (311)
+|+.+|+..+.+....++-+- +.+++++.||.|.+|+....+|-.
T Consensus 132 vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~ 176 (435)
T PRK01490 132 VTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEE 176 (435)
T ss_pred CCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEE
Confidence 688888888887776655321 234678999999999998877744
No 80
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=35.61 E-value=1.8e+02 Score=27.68 Aligned_cols=56 Identities=20% Similarity=0.403 Sum_probs=38.9
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCC-CCCCCCCCCeEEEEeeeeeCcEEeeee----ee
Q 021513 99 VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQDGDIINIDVTVYLNGYHGDTS----KT 173 (311)
Q Consensus 99 ~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~Gd~v~iD~g~~~~Gy~~D~~----RT 173 (311)
+|+.+|+..+.....+++-+- | .+++++.||.|.+|+....+|=..+.+ .+
T Consensus 120 vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~ 175 (408)
T TIGR00115 120 VTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFS 175 (408)
T ss_pred CCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECcCCCCCCeE
Confidence 588888888888777765431 1 235789999999999987777554432 36
Q ss_pred EEccC
Q 021513 174 FLCGN 178 (311)
Q Consensus 174 ~~vG~ 178 (311)
|.+|.
T Consensus 176 ~~lg~ 180 (408)
T TIGR00115 176 LELGS 180 (408)
T ss_pred EEECC
Confidence 66664
No 81
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=34.65 E-value=1.4e+02 Score=27.83 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccC
Q 021513 69 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPS 120 (311)
Q Consensus 69 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~ 120 (311)
-|+.||+.+-++-......+......+-|..++.++...++..+.+.-+.|.
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3889999999999999999999999999999999999999999988776664
No 82
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=33.85 E-value=73 Score=22.71 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=30.3
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEE
Q 021513 95 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINI 157 (311)
Q Consensus 95 i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~i 157 (311)
++.|.|-.+++..+|..+.+.=.+. .-.+ ......+..+++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A-----------~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA-----------VGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE-----------EEcc-----CEEECCCEEecCCCEEEE
Confidence 4568899999999998666532221 1112 112234678999999987
No 83
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=33.21 E-value=1.5e+02 Score=27.77 Aligned_cols=52 Identities=17% Similarity=0.274 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccC
Q 021513 69 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPS 120 (311)
Q Consensus 69 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~ 120 (311)
-|+.||+.+-++-......+......+-|..++.|+...++..+.+.-+.|.
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3889999999999999999999999999999999999999999988776664
No 84
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=33.02 E-value=22 Score=34.82 Aligned_cols=70 Identities=19% Similarity=0.207 Sum_probs=45.4
Q ss_pred CCCeEEEEeeeeeCcEEeeeeeeEEccC--------CCHHHHH--HHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHH
Q 021513 151 DGDIINIDVTVYLNGYHGDTSKTFLCGN--------VSDGLKR--LVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEK 220 (311)
Q Consensus 151 ~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~--------~~~~~~~--l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~ 220 (311)
.+|.-.+-+++.|.|||+|++.-|+.|- .-|.... +-...-+..-..+..++||.--.++-.+-++++.+
T Consensus 583 snD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~L~q 662 (698)
T KOG2611|consen 583 SNDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQ 662 (698)
T ss_pred cCCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 3677777789999999999999999872 1122111 11223344555677888997666666665555543
No 85
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=30.43 E-value=1.3e+02 Score=27.21 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=48.1
Q ss_pred eCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCch-hHHHHHHHHHHHHcCCc
Q 021513 163 LNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASF-KKIGKRISEHAEKYGFG 224 (311)
Q Consensus 163 ~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~-~ei~~~i~~~~~~~G~~ 224 (311)
-||. +-.||..++ ++++++..-....++.++-+.+.-|... .+|-+++.+.+++.++.
T Consensus 181 ~DGL-A~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~~ 239 (285)
T COG0414 181 EDGL-ALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGFV 239 (285)
T ss_pred CCcc-chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCC
Confidence 4555 456788876 8889998899999999999999999866 89999999999977764
No 86
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=30.35 E-value=42 Score=24.36 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=22.4
Q ss_pred HHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC
Q 021513 83 LAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA 117 (311)
Q Consensus 83 ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~ 117 (311)
|+.++...+.+..+.++|..+|...+...+.+.|.
T Consensus 40 i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 40 IASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 34444444444344499999999999999997764
No 87
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=28.52 E-value=1.4e+02 Score=22.45 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=48.1
Q ss_pred EEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCC-------chhHHHHHHHHHHHHcCCc
Q 021513 155 INIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGA-------SFKKIGKRISEHAEKYGFG 224 (311)
Q Consensus 155 v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~-------~~~ei~~~i~~~~~~~G~~ 224 (311)
..+|+.+...+|- .+++.+.+-. ..+.++.++...+.....+..+--|+ +-.+..+.|.+.+++.||-
T Consensus 23 ~V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~L 97 (98)
T PF02829_consen 23 RVLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGFL 97 (98)
T ss_dssp EEEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-B
T ss_pred EEEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCCc
Confidence 4458889999887 9999999854 45666777777777666777776663 4577889999999999983
No 88
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=25.21 E-value=52 Score=22.75 Aligned_cols=19 Identities=11% Similarity=0.323 Sum_probs=14.2
Q ss_pred HHhHhcCCCCcHHHHHHHH
Q 021513 90 AAGKLVRPSVTTNEIDKAV 108 (311)
Q Consensus 90 ~~~~~i~pG~te~ei~~~~ 108 (311)
...+.|++|||..||..++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567899999999988654
No 89
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=24.72 E-value=61 Score=23.41 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=26.8
Q ss_pred chhHHHHHHHHHHHHcCCcccccccccccCcccccCCcccc
Q 021513 206 SFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH 246 (311)
Q Consensus 206 ~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~ 246 (311)
...++-..+-+++++.||.++...+|+-+- .++-+|..
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYllS---GDPaYIts 53 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLLS---GDPAYITS 53 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhheec---CCCccccC
Confidence 456667777788999999998888887543 33445544
No 90
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=24.47 E-value=1.5e+02 Score=28.77 Aligned_cols=44 Identities=20% Similarity=0.360 Sum_probs=29.4
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcE
Q 021513 99 VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGY 166 (311)
Q Consensus 99 ~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy 166 (311)
+|+.||+..+.....++.-+ .|.++.++.||.|.||+.+..+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 56777777777655543321 122223899999999999887764
No 91
>PRK05423 hypothetical protein; Provisional
Probab=23.89 E-value=1.2e+02 Score=22.76 Aligned_cols=28 Identities=21% Similarity=0.475 Sum_probs=22.2
Q ss_pred HHHHHhHhcCCCCcHHHHHHHHHHHHHH
Q 021513 87 VLDAAGKLVRPSVTTNEIDKAVHQMIIE 114 (311)
Q Consensus 87 ~l~~~~~~i~pG~te~ei~~~~~~~~~~ 114 (311)
.++.+.+.|+||||..||.+++...--+
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~D 71 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKSD 71 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhh
Confidence 4556778899999999999988765443
No 92
>COG5041 SKB2 Casein kinase II, beta subunit [Signal transduction mechanisms / Cell division and chromosome partitioning / Transcription]
Probab=23.73 E-value=23 Score=30.40 Aligned_cols=16 Identities=38% Similarity=0.463 Sum_probs=12.0
Q ss_pred ccccchhhHHHHHHHH
Q 021513 2 RFNLTWLTKLLQILVR 17 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~ 17 (311)
|||||||..+.+-.++
T Consensus 50 rFNltgL~~~Vp~y~~ 65 (242)
T COG5041 50 RFNLTGLSREVPHYSE 65 (242)
T ss_pred hhhccchhhccchHHH
Confidence 7999999887765333
No 93
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=23.38 E-value=1.5e+02 Score=18.61 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHhHhcCCCCcHHHHHHHHHH
Q 021513 69 HDSESIAKMRAACELAARV-LDAAGKLVRPSVTTNEIDKAVHQ 110 (311)
Q Consensus 69 Ks~~EI~~~R~A~~ia~~~-l~~~~~~i~pG~te~ei~~~~~~ 110 (311)
=|++|-+.+.+|.+.-..- ...+...+.+|-|..++......
T Consensus 4 Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 4 WTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp S-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 3788999999888877666 66777777678888887766554
No 94
>KOG3092 consensus Casein kinase II, beta subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=23.23 E-value=22 Score=30.34 Aligned_cols=13 Identities=46% Similarity=0.562 Sum_probs=10.4
Q ss_pred ccccchhhHHHHH
Q 021513 2 RFNLTWLTKLLQI 14 (311)
Q Consensus 2 ~~~~~~~~~~~~~ 14 (311)
|||||||.+..+-
T Consensus 33 ~FNltgL~~~Vp~ 45 (216)
T KOG3092|consen 33 RFNLTGLSEQVPN 45 (216)
T ss_pred hhccccccccCch
Confidence 7999999877654
No 95
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=23.12 E-value=99 Score=20.58 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHH---HhHh-cCCC-CcHHHHHHHHHH
Q 021513 76 KMRAACELAARVLDA---AGKL-VRPS-VTTNEIDKAVHQ 110 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~---~~~~-i~pG-~te~ei~~~~~~ 110 (311)
.+.+|++++.+++.. +.+. ++-| +|+.|++.+++-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 577889999888864 2222 3456 789999887653
No 96
>smart00455 RBD Raf-like Ras-binding domain.
Probab=23.03 E-value=89 Score=21.87 Aligned_cols=23 Identities=13% Similarity=0.341 Sum_probs=18.5
Q ss_pred HccCCCchhHHHHHHHHHHHHcCCcc
Q 021513 200 VCKDGASFKKIGKRISEHAEKYGFGV 225 (311)
Q Consensus 200 ~~kpG~~~~ei~~~i~~~~~~~G~~~ 225 (311)
.+|||.++.|+ .+.+++++|+..
T Consensus 15 ~vrpg~tl~e~---L~~~~~kr~l~~ 37 (70)
T smart00455 15 KVRPGKTVRDA---LAKALKKRGLNP 37 (70)
T ss_pred EECCCCCHHHH---HHHHHHHcCCCH
Confidence 46899998876 666899999974
No 97
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=22.47 E-value=1.2e+02 Score=24.12 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhHhcCCCCcHHHHHHHHH
Q 021513 81 CELAARVLDAAGKLVRPSVTTNEIDKAVH 109 (311)
Q Consensus 81 ~~ia~~~l~~~~~~i~pG~te~ei~~~~~ 109 (311)
+.+|.+....+.+.+..|.|+.||-..+.
T Consensus 56 a~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v 84 (126)
T TIGR03147 56 SPIAYDLRHEVYSMVNEGKSNQQIIDFMT 84 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35788999999999999999998876554
No 98
>PRK15443 pduE propanediol dehydratase small subunit; Provisional
Probab=22.47 E-value=2.4e+02 Score=22.56 Aligned_cols=46 Identities=20% Similarity=0.168 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHH---HHHHHHHhHhcCCCCcH-HHHHHHHHHHHHHcCC
Q 021513 72 ESIAKMRAACELA---ARVLDAAGKLVRPSVTT-NEIDKAVHQMIIEAGA 117 (311)
Q Consensus 72 ~EI~~~R~A~~ia---~~~l~~~~~~i~pG~te-~ei~~~~~~~~~~~G~ 117 (311)
.=-..+|+|++++ ++-+-++.+.++|.-|+ .|+-++..+.-.+.++
T Consensus 65 ~la~NfrRAAELt~vpD~rvLeiYnaLRP~RStk~ELl~iA~eLe~~Y~A 114 (138)
T PRK15443 65 QLAMNFRRAAELTAVPDDRILEIYNALRPYRSTKEELLAIADELENKYQA 114 (138)
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHhhCCCcccHHHHHHHHHHHHHHhCC
Confidence 3345678888776 66777888999999766 6676666655555454
No 99
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=22.14 E-value=3.3e+02 Score=20.13 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH
Q 021513 76 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII 113 (311)
Q Consensus 76 ~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~ 113 (311)
.+|.-.+-..- ++-+.+.|+|+||..||.+++...--
T Consensus 27 KIRDNqKRV~L-LdNL~~YI~~~Ms~edi~~II~nMr~ 63 (95)
T PF04363_consen 27 KIRDNQKRVLL-LDNLSDYIKPDMSIEDIRAIIENMRS 63 (95)
T ss_pred HHhhhHHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHh
Confidence 34444433333 67788999999999999998876543
No 100
>PLN02660 pantoate--beta-alanine ligase
Probab=21.63 E-value=2.9e+02 Score=25.23 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=44.6
Q ss_pred eCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCC-chhHHHHHHHHHHHHcCCc
Q 021513 163 LNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGA-SFKKIGKRISEHAEKYGFG 224 (311)
Q Consensus 163 ~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~-~~~ei~~~i~~~~~~~G~~ 224 (311)
-+|. +-.||..++ ++++++.......++..+-+.++.|. ...++-+.+.+.+++.|+.
T Consensus 185 ~dGL-A~SSRN~yL---s~~eR~~A~~l~~~L~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 243 (284)
T PLN02660 185 ADGL-AMSSRNVRL---SAEEREKALSISRSLARAEELVEEGETDADELKEQVRQAIAEAGGE 243 (284)
T ss_pred CCCC-eeccccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhCCCC
Confidence 3444 455777776 78888888888888888888888886 5677888888888888763
No 101
>COG4001 Predicted metal-binding protein [General function prediction only]
Probab=21.59 E-value=2.7e+02 Score=20.62 Aligned_cols=39 Identities=15% Similarity=0.322 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCc
Q 021513 78 RAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAY 118 (311)
Q Consensus 78 R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~ 118 (311)
|.++++....++...++ -|+.|.+|.+.++..-..+|.-
T Consensus 55 ra~a~ivkkive~garA--fgVdee~iRE~~~d~ywrrGla 93 (102)
T COG4001 55 RALASIVKKIVERGARA--FGVDEEDIREQMHDQYWRRGLA 93 (102)
T ss_pred HHHHHHHHHHHHhcchh--cCCCHHHHHHHHHHHHHHHHHH
Confidence 44555555555544443 3899999999999988887753
No 102
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=20.36 E-value=2.3e+02 Score=23.71 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=36.7
Q ss_pred CCCCCCCCeEEEEeeee-eCcEEeeeee-----eEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCch
Q 021513 146 SRQLQDGDIINIDVTVY-LNGYHGDTSK-----TFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASF 207 (311)
Q Consensus 146 ~~~l~~Gd~v~iD~g~~-~~Gy~~D~~R-----T~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~ 207 (311)
....+.||.|.+++... .+|-.-|.++ +|.+|.. ....+++.++..+++|-+.
T Consensus 83 g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~~---------~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 83 GTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQQ---------DLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCCc---------chhHHHHHHHcCCCCCCEE
Confidence 34568999999998776 6776656554 5666641 2456677788888888654
Done!