Query 021519
Match_columns 311
No_of_seqs 146 out of 1288
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 03:37:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 8E-103 2E-107 738.3 21.3 293 6-305 22-324 (324)
2 cd00693 secretory_peroxidase H 100.0 2.6E-98 6E-103 705.6 23.4 293 8-304 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 6.1E-72 1.3E-76 510.1 11.1 228 25-269 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 6.3E-69 1.4E-73 501.0 20.4 230 23-302 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.6E-66 7.7E-71 477.3 19.0 231 19-291 10-252 (253)
6 cd00692 ligninase Ligninase an 100.0 8.5E-65 1.9E-69 481.0 20.3 239 21-308 16-290 (328)
7 PLN02364 L-ascorbate peroxidas 100.0 2.8E-64 6E-69 463.3 19.6 230 12-290 4-248 (250)
8 PLN02879 L-ascorbate peroxidas 100.0 2.1E-63 4.5E-68 456.8 19.6 220 22-290 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 1.5E-59 3.2E-64 434.4 15.8 223 24-286 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.7E-57 3.8E-62 437.7 19.0 260 22-295 44-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 8.8E-54 1.9E-58 435.4 19.2 255 23-291 55-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 3.9E-51 8.4E-56 414.0 19.4 256 22-291 56-410 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.3E-50 2.9E-55 371.9 9.9 231 9-286 14-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 8.3E-41 1.8E-45 310.6 15.9 220 27-288 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.9E-35 4.2E-40 301.4 15.5 220 24-289 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 7.1E-35 1.5E-39 295.8 16.8 220 27-289 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 4.3E-31 9.4E-36 257.6 17.3 252 24-289 71-417 (730)
18 COG0376 KatG Catalase (peroxid 99.3 7.4E-12 1.6E-16 123.6 11.4 215 27-288 452-725 (730)
19 PF11895 DUF3415: Domain of un 49.3 14 0.0003 28.5 2.1 29 273-305 3-31 (80)
20 KOG0400 40S ribosomal protein 36.7 19 0.00041 30.4 1.3 34 149-182 31-65 (151)
21 PTZ00411 transaldolase-like pr 25.9 59 0.0013 31.7 2.9 75 101-175 161-250 (333)
22 PRK13859 type IV secretion sys 25.2 42 0.00092 23.7 1.2 27 106-132 9-38 (55)
23 PF04225 OapA: Opacity-associa 21.9 43 0.00093 25.8 0.9 28 152-179 11-38 (85)
24 KOG3803 Transcription factor c 20.9 61 0.0013 34.3 2.0 35 17-64 671-705 (968)
25 PLN02161 beta-amylase 20.3 1.4E+02 0.003 30.9 4.3 34 262-299 234-272 (531)
26 PF09533 DUF2380: Predicted li 20.0 77 0.0017 28.2 2.1 32 151-182 107-138 (188)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=7.6e-103 Score=738.29 Aligned_cols=293 Identities=39% Similarity=0.667 Sum_probs=277.7
Q ss_pred CCCCccCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCccccccCCCCcccccccCCCCcchhHH
Q 021519 6 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 85 (311)
Q Consensus 6 ~~~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~ 85 (311)
.++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++ .+|+++++|.+|+||++
T Consensus 22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~~ 98 (324)
T PLN03030 22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYDV 98 (324)
T ss_pred hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHHH
Confidence 357999999999999999999999999999999999999999999999999999999864 36999999999999999
Q ss_pred HHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCc
Q 021519 86 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA 165 (311)
Q Consensus 86 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 165 (311)
|+.||++||+.||++||||||||||||+||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||+.
T Consensus 99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~ 177 (324)
T PLN03030 99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT 177 (324)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999877664 89999999999999999999999
Q ss_pred ccchhhcccccccccccccccccccC------CCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHH
Q 021519 166 PGLVALLGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRN 239 (311)
Q Consensus 166 ~dlVaLsGaHtiG~~hc~~f~~r~~n------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~ 239 (311)
+|||+||||||||++||.+|.+|+|| .+||+||+.|++.|+..||. .+..++ .++||+.||.+|||+||++
T Consensus 178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQ-NGDGSR--RIALDTGSSNRFDASFFSN 254 (324)
T ss_pred HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCC-CCCCCc--cccCCCCCCcccccHHHHH
Confidence 99999999999999999999999997 26999999999999999995 222233 6889999999999999999
Q ss_pred hhhcCCCcccccccccCCChHHHHHHHhhcH----HHHHHHHHHHHHHHHhCCCCCCCCCcccccccccc
Q 021519 240 ILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 305 (311)
Q Consensus 240 l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~A~~Km~~lgv~tg~~Geir~~C~~~n 305 (311)
|+.++|+|+|||+|+.|++|+++|++||.|+ ++|+++|++||+||++|+|+||.+|||||+|+.+|
T Consensus 255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.6e-98 Score=705.59 Aligned_cols=293 Identities=44% Similarity=0.753 Sum_probs=280.5
Q ss_pred CCccCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCccccccCCCCcccccccCCCCcchhHHHH
Q 021519 8 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIE 87 (311)
Q Consensus 8 ~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~i~ 87 (311)
||+++||++|||++|+||++.|++.+.++++++|++|||+||||||+||||||||+.+.++.+|+++++|.||+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999999999999999
Q ss_pred HHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCccc
Q 021519 88 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG 167 (311)
Q Consensus 88 ~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d 167 (311)
.||+++|++||++||||||||||||+||+++|||.|+|++||+|+.++....+ +.||.|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877655 78999999999999999999999999
Q ss_pred chhhcccccccccccccccccccC-----CCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhh
Q 021519 168 LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 242 (311)
Q Consensus 168 lVaLsGaHtiG~~hc~~f~~r~~n-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~ 242 (311)
||||+||||||++||.+|.+|+|| .+||+|++.|+..|+..||. .+..+. .++||+.||.+|||+||++|+.
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA-GGDDDT--LVPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCC-CCCCCc--cccCCCCCCCccccHHHHHHHh
Confidence 999999999999999999999996 47999999999999999996 322333 6899999999999999999999
Q ss_pred cCCCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCCCCCCCccccccccc
Q 021519 243 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 304 (311)
Q Consensus 243 ~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~tg~~Geir~~C~~~ 304 (311)
++|+|+|||+|+.|++|+++|++||.||++|+++|++||+||+++||+||.+|||||+|+.+
T Consensus 237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=6.1e-72 Score=510.13 Aligned_cols=228 Identities=42% Similarity=0.724 Sum_probs=210.1
Q ss_pred HHHHHHHHHHhCcCcccchhhhhhcccCC-CCCCCccccccCCCCcccccccCCCCcc-hhHHHHHHHHHHHhhCCCCcc
Q 021519 25 IREQVKLLYKRHKNTAFSWLRNIFHDCAV-QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAVERECPGVVS 102 (311)
Q Consensus 25 V~~~v~~~~~~~~~~a~~llRL~FHDc~v-~GcDgSill~~~~~~~~E~~~~~N~~L~-g~~~i~~iK~~le~~cp~~VS 102 (311)
||+.|++.+.++++++|++|||+|||||+ +|||||||+ +.+|+++++|.||+ ++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~-----~~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILL-----FSAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGG-----STTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceec-----cccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 999999998 34799999999997 999999999999999999999
Q ss_pred hhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhccccccccccc
Q 021519 103 CADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 182 (311)
Q Consensus 103 cADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc 182 (311)
|||||+|||++||+.+|||.|+|++||+|+.++.+.++ .+||.|..++++|++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhhcCCCcccccccccCCChHHH
Q 021519 183 VKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPY 262 (311)
Q Consensus 183 ~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~ 262 (311)
.+|. |+|..+||+||+.|+.+ .|+. ++ ++ .+++| ||.+|||+||++++.++|+|+||++|+.|++|+++
T Consensus 155 ~~f~-rl~~~~dp~~d~~~~~~---~C~~-~~--~~--~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~ 223 (230)
T PF00141_consen 155 SSFS-RLYFPPDPTMDPGYAGQ---NCNS-GG--DN--GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPI 223 (230)
T ss_dssp GCTG-GTSCSSGTTSTHHHHHH---SSST-SG--CT--CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHH
T ss_pred cccc-cccccccccccccccee---ccCC-Cc--cc--ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHH
Confidence 9999 99977899999999988 9932 22 22 57888 99999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 021519 263 VKKMAKS 269 (311)
Q Consensus 263 V~~yA~d 269 (311)
|++||+|
T Consensus 224 V~~yA~d 230 (230)
T PF00141_consen 224 VERYAQD 230 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=6.3e-69 Score=501.05 Aligned_cols=230 Identities=28% Similarity=0.439 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHhCcCcccchhhhhhcccC-------CCCCCCccccccCCCCcccccccCCCCc-chhHHHHHHHHHHH
Q 021519 23 DIIREQVKLLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 94 (311)
Q Consensus 23 ~iV~~~v~~~~~~~~~~a~~llRL~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~i~~iK~~le 94 (311)
+.++++++ .+.++|.++|.+|||+||||| ++||||||++. +|+++++|.|| +|+++|++||+++
T Consensus 15 ~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 35666664 467889999999999999999 89999999984 59999999999 6999999999987
Q ss_pred hhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhccc
Q 021519 95 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS 174 (311)
Q Consensus 95 ~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 174 (311)
| +|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.+++++++.|+++||+++|||||+||
T Consensus 87 ---~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ---P-KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ---C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 4 79999999999999999999999999999999999863 4689999999999999999999999999999999
Q ss_pred ccccccccccccccc-cCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhhc--CCC--ccc
Q 021519 175 HSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMV 249 (311)
Q Consensus 175 HtiG~~hc~~f~~r~-~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~~--~gl--L~S 249 (311)
||||++||. |+ |+ ++ + + .||.+|||+||++++.+ +|+ |+|
T Consensus 160 HTiG~ahc~----r~g~~---------------------g~-~--------~-~Tp~~FDN~Yy~~ll~~~~~gll~L~S 204 (289)
T PLN02608 160 HTLGRAHPE----RSGFD---------------------GP-W--------T-KEPLKFDNSYFVELLKGESEGLLKLPT 204 (289)
T ss_pred ccccccccc----CCCCC---------------------CC-C--------C-CCCCccChHHHHHHHcCCcCCcccccc
Confidence 999999995 43 11 11 1 1 68999999999999998 787 799
Q ss_pred ccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCCCCCCCccccccc
Q 021519 250 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 302 (311)
Q Consensus 250 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~tg~~Geir~~C~ 302 (311)
|++|+.|++|+++|++||.|+++|+++|++||+||++|||+||.+||+.+.-+
T Consensus 205 D~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 205 DKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred CHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 99999999999999999999999999999999999999999999999998654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.6e-66 Score=477.34 Aligned_cols=231 Identities=29% Similarity=0.437 Sum_probs=208.1
Q ss_pred hhHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCcccccc---CCCCcccccccCCCCc-chhHHHHHHHHHHH
Q 021519 19 PQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS---TRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 94 (311)
Q Consensus 19 p~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~---~~~~~~E~~~~~N~~L-~g~~~i~~iK~~le 94 (311)
-+.++||++.|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.+| +|+++|++||+++
T Consensus 10 ~~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~- 85 (253)
T cd00691 10 AKDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc-
Confidence 4567899999999999 999999999999999984 777776643 3334579999999999 8999999999987
Q ss_pred hhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhccc
Q 021519 95 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS 174 (311)
Q Consensus 95 ~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 174 (311)
| +||||||||||||+||+.+|||.|+|++||+|+.++....++.+||.|+.++++|++.|+++||+++|||||+||
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 5 799999999999999999999999999999999999877777889999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhhcCC--------C
Q 021519 175 HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKG--------L 246 (311)
Q Consensus 175 HtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~~~g--------l 246 (311)
||||++||..+ . + ++.+ ..||.+|||+||++|+.++| +
T Consensus 162 HTiG~a~c~~~--~-~----------------------~g~~---------~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~ 207 (253)
T cd00691 162 HTLGRCHKERS--G-Y----------------------DGPW---------TKNPLKFDNSYFKELLEEDWKLPTPGLLM 207 (253)
T ss_pred ceeecccccCC--C-C----------------------CCCC---------CCCCCcccHHHHHHHhcCCCccCcCccee
Confidence 99999999531 0 1 1101 15899999999999999999 9
Q ss_pred cccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCCC
Q 021519 247 MMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT 291 (311)
Q Consensus 247 L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~t 291 (311)
|+||++|+.|++|+++|++||.|+++|+++|++||+||+++||..
T Consensus 208 L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 208 LPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred chhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999964
No 6
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.5e-65 Score=481.02 Aligned_cols=239 Identities=26% Similarity=0.324 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHhCc---CcccchhhhhhcccCC------------CCCCCccccccCCCCcccccccCCCCcchhHH
Q 021519 21 AEDIIREQVKLLYKRHK---NTAFSWLRNIFHDCAV------------QSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 85 (311)
Q Consensus 21 ~e~iV~~~v~~~~~~~~---~~a~~llRL~FHDc~v------------~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~ 85 (311)
+|..|+++|++.+..+. ..|+.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 58899999999998554 4577799999999996 799999999743 599999999998 99
Q ss_pred HHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhc-CCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCC
Q 021519 86 IENIKEAVERECPGVVSCADILVLSGRDGVVAL-GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 164 (311)
Q Consensus 86 i~~iK~~le~~cp~~VScADilalAa~~av~~~-GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~ 164 (311)
|+.||..+|+.| ||||||||||||+||+.+ |||.|+|++||+|++++.+ ++.||.|+.++++|++.|+++||+
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 999999999999999964 9999999999999999864 468999999999999999999999
Q ss_pred cccchhhcccccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhh-hc
Q 021519 165 APGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL-DN 243 (311)
Q Consensus 165 ~~dlVaLsGaHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~-~~ 243 (311)
++|||||+||||||++|. +||+++ .+++| .||.+|||+||++++ .+
T Consensus 164 ~~E~VaLsGAHTiG~a~~----------~Dps~~----------------------g~p~D-~TP~~FDn~Yf~~ll~~~ 210 (328)
T cd00692 164 PDELVALLAAHSVAAQDF----------VDPSIA----------------------GTPFD-STPGVFDTQFFIETLLKG 210 (328)
T ss_pred HHHHhhhcccccccccCC----------CCCCCC----------------------CCCCC-CCcchhcHHHHHHHHHcC
Confidence 999999999999999982 366653 24577 699999999999987 45
Q ss_pred CC-------------------CcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCCCCCCCccccccccc
Q 021519 244 KG-------------------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 304 (311)
Q Consensus 244 ~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~tg~~Geir~~C~~~ 304 (311)
.+ +|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. ...+.+|+.|
T Consensus 211 ~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v 286 (328)
T cd00692 211 TAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDV 286 (328)
T ss_pred CCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCccc
Confidence 54 499999999999999999999999999999999999999999986 3378899999
Q ss_pred cCCC
Q 021519 305 NKLH 308 (311)
Q Consensus 305 n~~~ 308 (311)
++..
T Consensus 287 ~p~~ 290 (328)
T cd00692 287 IPPP 290 (328)
T ss_pred CCCC
Confidence 9753
No 7
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.8e-64 Score=463.31 Aligned_cols=230 Identities=30% Similarity=0.465 Sum_probs=205.8
Q ss_pred Ccccc--CChhHHHHHHHHHHHHHHhCcCcccchhhhhhc-----ccCCC--CCCCccccccCCCCcccccccCCCCc-c
Q 021519 12 NFYKD--TCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFH-----DCAVQ--SCDASLLLDSTRKTLSEKEMDRSFGM-R 81 (311)
Q Consensus 12 ~fY~~--sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FH-----Dc~v~--GcDgSill~~~~~~~~E~~~~~N~~L-~ 81 (311)
+||.. -|+.+++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.+ .+|+++++|.|| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 56653 38899999999999988 778999999999999 88876 99999954 369999999999 8
Q ss_pred hhHHHHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHH-
Q 021519 82 NFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAA- 160 (311)
Q Consensus 82 g~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 160 (311)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|+.++.+ +++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 479999999999999999999999999999999999865 46899999999999999997
Q ss_pred cCCCcccchhhcccccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHh
Q 021519 161 IGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 240 (311)
Q Consensus 161 ~Gl~~~dlVaLsGaHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l 240 (311)
+||+++|||||+||||||++||. |+ + + .+ . ++ .||.+|||+||++|
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc~----r~-~-----~---------------~g--~------~~-~tp~~fDn~Yy~~l 194 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHKD----RS-G-----F---------------EG--A------WT-SNPLIFDNSYFKEL 194 (250)
T ss_pred cCCCHHHheeeecceeeccccCC----CC-C-----C---------------CC--C------CC-CCCCccchHHHHHH
Confidence 69999999999999999999993 32 0 0 01 0 11 68999999999999
Q ss_pred hhc--CCCcc--cccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCC
Q 021519 241 LDN--KGLMM--VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 290 (311)
Q Consensus 241 ~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~ 290 (311)
+.+ +|+|. ||++|+.|++|+.+|++||.|++.|+++|++||+||++||+-
T Consensus 195 l~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 195 LSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred hcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 998 89865 999999999999999999999999999999999999999974
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=2.1e-63 Score=456.84 Aligned_cols=220 Identities=29% Similarity=0.437 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHhCcCcccchhhhhhcccCC-------CCCCCccccccCCCCcccccccCCCCcc-hhHHHHHHHHHH
Q 021519 22 EDIIREQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAV 93 (311)
Q Consensus 22 e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~L~-g~~~i~~iK~~l 93 (311)
.+-+++.+.+.+. +..++|.+|||+||||.+ +||||||++. .|+++++|.||+ ++++|++||+++
T Consensus 17 ~~~~~~~~~~~~~-~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLIA-EKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHHh-CCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc
Confidence 3445777777764 568999999999999975 7999999863 599999999997 999999999998
Q ss_pred HhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhcc
Q 021519 94 ERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLG 173 (311)
Q Consensus 94 e~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG 173 (311)
++|||||||+||||+||+.+|||.|+|++||+|+.++.+ +++||.|+.++++|++.|++|||+++|||||+|
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 479999999999999999999999999999999998754 578999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhhc--CCC--ccc
Q 021519 174 SHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMV 249 (311)
Q Consensus 174 aHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~~--~gl--L~S 249 (311)
|||||++||. |. + + .+ .+| .||.+|||+||++|+.+ +|+ |+|
T Consensus 162 aHTiG~ah~~----r~-g-----~---------------~g--------~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~S 207 (251)
T PLN02879 162 GHTLGRCHKE----RS-G-----F---------------EG--------AWT-PNPLIFDNSYFKEILSGEKEGLLQLPT 207 (251)
T ss_pred cccccccccc----cc-c-----C---------------CC--------CCC-CCccceeHHHHHHHHcCCcCCCccchh
Confidence 9999999995 31 1 0 11 123 58999999999999998 887 689
Q ss_pred ccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCCC
Q 021519 250 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 290 (311)
Q Consensus 250 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv~ 290 (311)
|++|+.|++|+++|++||.||++||++|++||+||++||+.
T Consensus 208 D~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 208 DKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999985
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.5e-59 Score=434.38 Aligned_cols=223 Identities=31% Similarity=0.487 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHhCcCcccchhhhhhcccCCC--------CCCCccccccCCCCcccccccCCCCc-chhHHHHHHHHHHH
Q 021519 24 IIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------SCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 94 (311)
Q Consensus 24 iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~--------GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~i~~iK~~le 94 (311)
.|+..|+..+.+++.+++++|||+||||+++ ||||||+++. |+++++|.|| +++++|+.||.+++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 9999999963 9999999997 89999999999998
Q ss_pred hhCCCCcchhhHHHHhhhhHHhhc--CCCCccccCCCCCCCCCc--hhhhhccCCCCCCCHHHHHHHHHHcCCCcccchh
Q 021519 95 RECPGVVSCADILVLSGRDGVVAL--GGPYIPLKTGRRDGRKSR--AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVA 170 (311)
Q Consensus 95 ~~cp~~VScADilalAa~~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 170 (311)
. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+...+|.|..++.++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 889999999999999999999 999999999999999764 3334567888888999999999999999999999
Q ss_pred hc-ccccc-cccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHhhhcC----
Q 021519 171 LL-GSHSV-GRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK---- 244 (311)
Q Consensus 171 Ls-GaHti-G~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn~Yy~~l~~~~---- 244 (311)
|+ ||||| |++||..|..|+ |+ ++..||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-------------------~~-------------~~~~tp~~fDN~yy~~l~~~~~~~~ 201 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-------------------SG-------------LWTSTPFTFDNAYFKNLLDMNWEWR 201 (255)
T ss_pred hccCCeeccCcccCCCCCccc-------------------CC-------------CCCCCCCccchHHHHHHhcCCcccc
Confidence 99 99999 999998775442 21 233799999999999999988
Q ss_pred ------------CCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHh
Q 021519 245 ------------GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 286 (311)
Q Consensus 245 ------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~ 286 (311)
++|+||++|+.|++|+.+|++||.|+++|+++|++||+||++
T Consensus 202 ~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 202 VGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.7e-57 Score=437.67 Aligned_cols=260 Identities=19% Similarity=0.263 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHhC--------cCcccchhhhhhcccCC-------CCCC-CccccccCCCCcccccccCCCCc-chhH
Q 021519 22 EDIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFR 84 (311)
Q Consensus 22 e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~L-~g~~ 84 (311)
.+.|+++|++.+... ..++|.+|||+||++.+ +|++ |+|.+. +|++++.|.|| +++.
T Consensus 44 ~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~ 117 (409)
T cd00649 44 LEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARR 117 (409)
T ss_pred HHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHH
Confidence 368999999999864 47999999999999986 6886 788764 69999999999 6899
Q ss_pred HHHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchh--------------------------
Q 021519 85 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-------------------------- 138 (311)
Q Consensus 85 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 138 (311)
++++||+++ |..||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 118 ~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~ 193 (409)
T cd00649 118 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA 193 (409)
T ss_pred HHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence 999999988 55699999999999999999999999999999999754320
Q ss_pred ---------hhhc--cCCCCCCCHHHHHHHHHHcCCCcccchhh-cccccccccccccccccccCCCCCCCCcchhhhhh
Q 021519 139 ---------ILEQ--YLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML 206 (311)
Q Consensus 139 ---------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~ 206 (311)
.+++ .||+|..++.+|++.|++||||++||||| +||||||++||..|.+|+. +||.+++.|++.|+
T Consensus 194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg--~dP~~~~~~~~gLg 271 (409)
T cd00649 194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG--PEPEAAPIEQQGLG 271 (409)
T ss_pred hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC--CCCCcCHHHHHhhc
Confidence 0123 69999999999999999999999999999 5999999999999999984 79999999999995
Q ss_pred --hcCCCCCCCCCcccccccC---CCCCcccchHHHHHhhh------------------------------------cCC
Q 021519 207 --HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILD------------------------------------NKG 245 (311)
Q Consensus 207 --~~Cp~~~~~~~~~~~~~~D---~~tp~~fDn~Yy~~l~~------------------------------------~~g 245 (311)
..||...+.++. .+.+| +.||.+|||+||++|+. +++
T Consensus 272 w~~~Cp~g~g~~t~--~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~g 349 (409)
T cd00649 272 WKNSYGTGKGKDTI--TSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPM 349 (409)
T ss_pred ccccCCCCCCCCCc--cccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcc
Confidence 899962222222 56788 47999999999999998 568
Q ss_pred CcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHH--HhCCCCCCCCC
Q 021519 246 LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL--SENNPLTGTKG 295 (311)
Q Consensus 246 lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km--~~lgv~tg~~G 295 (311)
||+||++|+.|++|+++|++||+|+++||++|++||+|| ..+|+++--.|
T Consensus 350 mL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 350 MLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 999999999999999999999999999999999999999 58999875444
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.8e-54 Score=435.36 Aligned_cols=255 Identities=19% Similarity=0.270 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHhC--------cCcccchhhhhhcccCC-------CCCC-CccccccCCCCcccccccCCCCc-chhHH
Q 021519 23 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 85 (311)
Q Consensus 23 ~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~L-~g~~~ 85 (311)
+.|+++|++.+... ..++|.+|||+||++.+ +||+ |+|.+. +|++++.|.+| +++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 56999999999874 47999999999999987 6884 788764 69999999999 68889
Q ss_pred HHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCc-----------------------------
Q 021519 86 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR----------------------------- 136 (311)
Q Consensus 86 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~----------------------------- 136 (311)
+++||++ ||++|||||||+|||++||+.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 9988875 6889999999999999999999999999999999994321
Q ss_pred --------hhhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhc-ccccccccccccccccccCCCCCCCCcchhhhhhh
Q 021519 137 --------AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLH 207 (311)
Q Consensus 137 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~ 207 (311)
+.. ...+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|+ ++||++++.|++.|+.
T Consensus 205 ~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl--g~dP~~~~~~~~gLg~ 281 (716)
T TIGR00198 205 EMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI--GPDPEGAPIEEQGLGW 281 (716)
T ss_pred hccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--CCCCCcCHHHHHHhcc
Confidence 111 12699999999999999999999999999996 99999999999999998 5899999999999999
Q ss_pred cCCCCCC-CCCcccccccC---CCCCcccchHHHHHhhhc----------------------------------CCCccc
Q 021519 208 KCPDAIP-DPKAVQYVRND---RGTPMVLDNNYYRNILDN----------------------------------KGLMMV 249 (311)
Q Consensus 208 ~Cp~~~~-~~~~~~~~~~D---~~tp~~fDn~Yy~~l~~~----------------------------------~glL~S 249 (311)
.||...+ +..++ ++.+| ..||.+|||+||++|+.+ .++|+|
T Consensus 282 ~c~~~~g~g~dt~-~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~S 360 (716)
T TIGR00198 282 HNQYGKGVGRDTM-TSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDA 360 (716)
T ss_pred cCCCCCCCCCCcc-cccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccch
Confidence 9985211 12221 46777 479999999999999974 689999
Q ss_pred ccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHH--hCCCCC
Q 021519 250 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLT 291 (311)
Q Consensus 250 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~--~lgv~t 291 (311)
|++|..|++++++|++||.|+++|+++|++||+||+ .+|++.
T Consensus 361 DlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 361 DLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred hHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 999999999999999999999999999999999999 566544
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.9e-51 Score=413.97 Aligned_cols=256 Identities=18% Similarity=0.270 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHHhC--------cCcccchhhhhhcccCC-------CCCC-CccccccCCCCcccccccCCCCc-chhH
Q 021519 22 EDIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFR 84 (311)
Q Consensus 22 e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~L-~g~~ 84 (311)
.+.|+++|++.+... ...+|.+|||+||++.+ +||+ |+|.+. +|++++.|.|| +++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHH
Confidence 357999999999864 47999999999999987 6886 788764 69999999999 6899
Q ss_pred HHHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchh--------------------------
Q 021519 85 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-------------------------- 138 (311)
Q Consensus 85 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 138 (311)
++++||+++ |..||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999998 55799999999999999999999999999999998653320
Q ss_pred ------------hhhccCCCCCCCHHHHHHHHHHcCCCcccchhhc-ccccccccccccccccccCCCCCCCCcchhhhh
Q 021519 139 ------------ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHM 205 (311)
Q Consensus 139 ------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L 205 (311)
+-...+|+|..++.+|++.|++||||++|+|||+ ||||||++||..|.+|+ ++||.+++.+.+.|
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl--gpdP~~a~~~~qgL 283 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV--GPEPEAAPIEEQGL 283 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc--CCCCCcCHHHHHhc
Confidence 0012389999999999999999999999999995 99999999999999998 58999999999998
Q ss_pred h--hcCCCCCCCCCcccccccC---CCCCcccchHHHHHhhhc------------------------------------C
Q 021519 206 L--HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILDN------------------------------------K 244 (311)
Q Consensus 206 ~--~~Cp~~~~~~~~~~~~~~D---~~tp~~fDn~Yy~~l~~~------------------------------------~ 244 (311)
. +.||. +....++ +..+| ..||.+|||+||++|+.+ .
T Consensus 284 gw~~~c~~-g~g~dt~-tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~ 361 (726)
T PRK15061 284 GWKNSYGS-GKGADTI-TSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAP 361 (726)
T ss_pred cccccCCC-CCCCCCc-cccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCc
Confidence 5 89996 3222222 46788 479999999999999984 5
Q ss_pred CCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHh--CCCCC
Q 021519 245 GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE--NNPLT 291 (311)
Q Consensus 245 glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~--lgv~t 291 (311)
+||+||++|+.|+.++++|++||+|+++|+++|++||.||++ +|+++
T Consensus 362 ~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ 410 (726)
T PRK15061 362 TMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKS 410 (726)
T ss_pred ccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchh
Confidence 899999999999999999999999999999999999999955 66654
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.3e-50 Score=371.86 Aligned_cols=231 Identities=19% Similarity=0.286 Sum_probs=184.3
Q ss_pred CccCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhcccC-------CCCCCCccccccCCCCccccc-ccCCCCc
Q 021519 9 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKE-MDRSFGM 80 (311)
Q Consensus 9 l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~-------v~GcDgSill~~~~~~~~E~~-~~~N~~L 80 (311)
++.+||+.. ..+.|...-......++++++.+|||+||||| ++||||||+++.+ .+|+. .+.|.+|
T Consensus 14 ~~~g~~~~~---f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l 87 (264)
T cd08201 14 LQSGYSARG---FVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTL 87 (264)
T ss_pred hcccceecc---cccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhcc
Confidence 345555532 22233444444555789999999999999999 7899999999732 35666 5556677
Q ss_pred chhHHHHHHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHH
Q 021519 81 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAA 160 (311)
Q Consensus 81 ~g~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 160 (311)
++|+.|+.+ +||||||||||||+||+.||||.|+|++||+|++++.+. .||.|+.++++|++.|++
T Consensus 88 ~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~ 153 (264)
T cd08201 88 NFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRR 153 (264)
T ss_pred ccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHH
Confidence 788776532 599999999999999999999999999999999988763 499999999999999999
Q ss_pred cCCCcccchhhcc-cccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCC-CcccccccCCCCCcccchHHHH
Q 021519 161 IGIDAPGLVALLG-SHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDP-KAVQYVRNDRGTPMVLDNNYYR 238 (311)
Q Consensus 161 ~Gl~~~dlVaLsG-aHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~-~~~~~~~~D~~tp~~fDn~Yy~ 238 (311)
|||+++|||+|+| |||||++||..|.++.- |. .+ +. ..++| +||.+|||+||.
T Consensus 154 ~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~----~g------------------~~~~~--~~p~d-stp~~FDn~~f~ 208 (264)
T cd08201 154 QGFSTSEMIALVACGHTLGGVHSEDFPEIVP----PG------------------SVPDT--VLQFF-DTTIQFDNKVVT 208 (264)
T ss_pred cCCChHHHheeecCCeeeeecccccchhhcC----Cc------------------cccCC--CCCCC-CCccccchHHHH
Confidence 9999999999996 99999999998866532 11 01 11 35677 799999999999
Q ss_pred HhhhcC--C--------CcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHh
Q 021519 239 NILDNK--G--------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 286 (311)
Q Consensus 239 ~l~~~~--g--------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~ 286 (311)
+++.+. + .+.||..++.... ...++..| +++.|.+.++..+.||++
T Consensus 209 E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~-n~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 209 EYLSGTTNNPLVVGPNNTTNSDLRIFSSDG-NVTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred HHhcCCCCCceeecCCCCccchhhheecCc-cHHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 999864 2 4679999997543 45667777 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=8.3e-41 Score=310.64 Aligned_cols=220 Identities=20% Similarity=0.293 Sum_probs=180.2
Q ss_pred HHHHHHHHhCcCcccchhhhhhcccCC-------CCCCCc-cccccCCCCcccccccCCCC--c-chhHHHHHHHHHHHh
Q 021519 27 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSFG--M-RNFRYIENIKEAVER 95 (311)
Q Consensus 27 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--L-~g~~~i~~iK~~le~ 95 (311)
+.+++.|....-.++.||||+||++.+ +||+|+ |.| .+|++++.|.+ | +.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 677777888888999999999999986 799998 766 46999999998 8 689999999999842
Q ss_pred h-CC-CCcchhhHHHHhhhhHHhhcCC-----CCccccCCCCCCCCCchhhh--hccCCCCCC------------CHHHH
Q 021519 96 E-CP-GVVSCADILVLSGRDGVVALGG-----PYIPLKTGRRDGRKSRAEIL--EQYLPDHND------------SMSVV 154 (311)
Q Consensus 96 ~-cp-~~VScADilalAa~~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~~------------~~~~l 154 (311)
. -+ ..||+||+|+||+.+|||.+|| |.|+|.+||.|......... ...+|.++. ...+|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 1 11 1699999999999999999999 99999999999987532210 113454322 34789
Q ss_pred HHHHHHcCCCcccchhhcccc-cccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccc
Q 021519 155 LERFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLD 233 (311)
Q Consensus 155 ~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fD 233 (311)
++.|.++|||++|||||+||| ++|+.|..++ + ++ |+ .+|.+||
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~----~----------------------G~-wT---------~~p~~f~ 214 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H----------------------GV-FT---------DRPGVLT 214 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC----C----------------------CC-Cc---------CCCCccc
Confidence 999999999999999999997 6998875321 1 11 33 4899999
Q ss_pred hHHHHHhhhc--------------------CC-----CcccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHHHh
Q 021519 234 NNYYRNILDN--------------------KG-----LMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSE 286 (311)
Q Consensus 234 n~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~A~~Km~~ 286 (311)
|.||++|+.. .| .+++|++|.+|++.|++|+.||.| +++||+||++||.||.+
T Consensus 215 N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klme 294 (297)
T cd08200 215 NDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMN 294 (297)
T ss_pred cHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 9999999851 01 268899999999999999999998 99999999999999998
Q ss_pred CC
Q 021519 287 NN 288 (311)
Q Consensus 287 lg 288 (311)
+.
T Consensus 295 ld 296 (297)
T cd08200 295 LD 296 (297)
T ss_pred cC
Confidence 74
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.9e-35 Score=301.38 Aligned_cols=220 Identities=20% Similarity=0.310 Sum_probs=176.3
Q ss_pred HHHHHHHHH---HHhCcCcccchhhhhhcccCC-------CCCCCc-cccccCCCCcccccccCC--CCc-chhHHHHHH
Q 021519 24 IIREQVKLL---YKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRS--FGM-RNFRYIENI 89 (311)
Q Consensus 24 iV~~~v~~~---~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N--~~L-~g~~~i~~i 89 (311)
+|+++|.+. +....-..+.||||+||++.+ +|++|+ |.|. +|++++.| .|| +.+.++++|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 345555543 556667889999999999986 799998 7664 69999999 799 689999999
Q ss_pred HHHHHhhCCCCcchhhHHHHhhhhHHhhc---CCC--CccccCCCCCCCCCchhhhhccCC---CC------------CC
Q 021519 90 KEAVERECPGVVSCADILVLSGRDGVVAL---GGP--YIPLKTGRRDGRKSRAEILEQYLP---DH------------ND 149 (311)
Q Consensus 90 K~~le~~cp~~VScADilalAa~~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p------------~~ 149 (311)
|+++.. ..||+||+|+||+.+|||.+ ||| .|+|.+||.|.+.... +++...| .+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998832 26999999999999999999 898 5799999999987532 2222222 11 12
Q ss_pred CHHHHHHHHHHcCCCcccchhhccc-ccccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCC
Q 021519 150 SMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGT 228 (311)
Q Consensus 150 ~~~~l~~~F~~~Gl~~~dlVaLsGa-HtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~t 228 (311)
....|++.|.++|||++|||||+|| |++|++|..++ + ++ ++ .+
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~----~----------------------G~-~T---------~~ 622 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK----H----------------------GV-FT---------DR 622 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC----C----------------------CC-Cc---------CC
Confidence 3567899999999999999999998 59999985421 1 11 23 48
Q ss_pred CcccchHHHHHhhhcC--------------------C---Cc--ccccccccCCChHHHHHHHhhcH--HHHHHHHHHHH
Q 021519 229 PMVLDNNYYRNILDNK--------------------G---LM--MVDHQLATDKRTRPYVKKMAKSQ--DYFFKEFSRAI 281 (311)
Q Consensus 229 p~~fDn~Yy~~l~~~~--------------------g---lL--~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~A~ 281 (311)
|.+|||.||++|+... | ++ ++|.+|..|++.|++|+.||+|+ ++||+||++||
T Consensus 623 p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw 702 (716)
T TIGR00198 623 VGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAW 702 (716)
T ss_pred CCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999998621 2 22 77999999999999999999997 89999999999
Q ss_pred HHHHhCCC
Q 021519 282 TLLSENNP 289 (311)
Q Consensus 282 ~Km~~lgv 289 (311)
.||.+++-
T Consensus 703 ~Klm~ldr 710 (716)
T TIGR00198 703 TKVMNLDR 710 (716)
T ss_pred HHHHhCCC
Confidence 99999974
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=7.1e-35 Score=295.81 Aligned_cols=220 Identities=19% Similarity=0.301 Sum_probs=180.8
Q ss_pred HHHHHHHHhCcCcccchhhhhhcccCC-------CCCCCc-cccccCCCCcccccccCCC--Cc-chhHHHHHHHHHHHh
Q 021519 27 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 95 (311)
Q Consensus 27 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~L-~g~~~i~~iK~~le~ 95 (311)
..++..|....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. +| +.+.+++.||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 667777777777899999999999986 799998 8774 699999999 88 689999999999964
Q ss_pred hCC--CCcchhhHHHHhhhhHHhhc---CC--CCccccCCCCCCCCCchhhhh---ccCCCCC------------CCHHH
Q 021519 96 ECP--GVVSCADILVLSGRDGVVAL---GG--PYIPLKTGRRDGRKSRAEILE---QYLPDHN------------DSMSV 153 (311)
Q Consensus 96 ~cp--~~VScADilalAa~~av~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 153 (311)
.-. ..||+||+|+||+.+|||.+ || |.|++.+||.|.+... .+++ ..+|.++ .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~-td~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQ-TDVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCC-CCcccccccCCCCccccccccccCCCCHHHH
Confidence 321 25999999999999999999 68 9999999999997753 2222 2456543 13478
Q ss_pred HHHHHHHcCCCcccchhhcccc-cccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCccc
Q 021519 154 VLERFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVL 232 (311)
Q Consensus 154 l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~f 232 (311)
|++.|.++|||++|||||+||| ++|..|-.++ + ++ ++ .+|.+|
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~----~----------------------G~-~T---------~~p~~f 638 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H----------------------GV-FT---------DRPGVL 638 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCC----C----------------------CC-Cc---------CCCCcc
Confidence 9999999999999999999997 7888874321 0 11 22 479999
Q ss_pred chHHHHHhhhc----------C----------C---C--cccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHHH
Q 021519 233 DNNYYRNILDN----------K----------G---L--MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLS 285 (311)
Q Consensus 233 Dn~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~A~~Km~ 285 (311)
||.||++|+.. . | + +++|.+|.+|++.|++|+.||.| +++||+||++||.|+.
T Consensus 639 sNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvm 718 (726)
T PRK15061 639 TNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVM 718 (726)
T ss_pred ccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 99999999851 0 1 1 47899999999999999999999 9999999999999999
Q ss_pred hCCC
Q 021519 286 ENNP 289 (311)
Q Consensus 286 ~lgv 289 (311)
+++-
T Consensus 719 eldr 722 (726)
T PRK15061 719 NLDR 722 (726)
T ss_pred hCCC
Confidence 9974
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.3e-31 Score=257.57 Aligned_cols=252 Identities=18% Similarity=0.266 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHhC--------cCcccchhhhhhcccCC-------CCCCCccccccCCCCcccccccCCCCc-chhHHHH
Q 021519 24 IIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIE 87 (311)
Q Consensus 24 iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~i~ 87 (311)
.|...+....... ...+|.+|||+||-+.+ +|..+ +..+|.++.++|.|.+| +++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~-----G~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGG-----GQQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCC-----CceecccccCCCcccchHHHHHHhh
Confidence 4556666665553 35899999999999987 33332 23456789999999999 6999999
Q ss_pred HHHHHHHhhCCCCcchhhHHHHhhhhHHhhcCCCCccccCCCCCCCCCch------------------------------
Q 021519 88 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA------------------------------ 137 (311)
Q Consensus 88 ~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~------------------------------ 137 (311)
+||+++ +..||+||+|.||+.+|++.+|++.+.+..||.|...+..
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999999 6689999999999999999999999999999999876654
Q ss_pred --------hhhhccCCCCCCCHHHHHHHHHHcCCCcccchhhcc-cccccccccccccccccCCCCCCCCcchhhhhh--
Q 021519 138 --------EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLG-SHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML-- 206 (311)
Q Consensus 138 --------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHtiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~-- 206 (311)
.+ ++..|+|..+..++++.|++|+++++|.|||++ |||+|++|...-.+-+ +++|.-.+--.+.|.
T Consensus 222 MGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v--g~ePe~a~ie~qGlGW~ 298 (730)
T COG0376 222 MGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV--GPEPEAAPIEQQGLGWA 298 (730)
T ss_pred eeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc--CCCccccchhhhccccc
Confidence 11 235899999999999999999999999999986 9999999976422111 567764444444442
Q ss_pred hcCCCCCCCCCcccccccC---CCCCcccchHHHHHhhhc-----------------------------------CCCcc
Q 021519 207 HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILDN-----------------------------------KGLMM 248 (311)
Q Consensus 207 ~~Cp~~~~~~~~~~~~~~D---~~tp~~fDn~Yy~~l~~~-----------------------------------~glL~ 248 (311)
..|.. +.+..+| +..+. ..||++|||.||.+|+.. ..||.
T Consensus 299 ~~~g~-G~G~dti-tsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mlt 376 (730)
T COG0376 299 NTYGS-GKGPDTI-TSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLT 376 (730)
T ss_pred cccCC-CcCcccc-cccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeec
Confidence 23332 1112222 12222 258999999999999852 14899
Q ss_pred cccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHhCCC
Q 021519 249 VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNP 289 (311)
Q Consensus 249 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lgv 289 (311)
+|++|..||..+++.++|.+|++.|.+.|++||-||.+-..
T Consensus 377 tDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 377 TDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred cchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999998654
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.33 E-value=7.4e-12 Score=123.63 Aligned_cols=215 Identities=21% Similarity=0.346 Sum_probs=152.7
Q ss_pred HHHHHHHHhCcCcccchhhhhhcccCC-------CCCCC-ccccccCCCCcccccccCCC--Cc-chhHHHHHHHHHHHh
Q 021519 27 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDA-SLLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 95 (311)
Q Consensus 27 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~i~~iK~~le~ 95 (311)
..++..|.+..-....|+-.+|-.+-+ +|.+| -|.|. +.++++.|. -| +-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456677777777788999999988865 57776 45564 588999996 45 57888888888885
Q ss_pred hCCCCcchhhHHHHhhhhHHhhc---CCCC--ccccCCCCCCCCCchhhhhcc--C-CC------------CCCCHHHHH
Q 021519 96 ECPGVVSCADILVLSGRDGVVAL---GGPY--IPLKTGRRDGRKSRAEILEQY--L-PD------------HNDSMSVVL 155 (311)
Q Consensus 96 ~cp~~VScADilalAa~~av~~~---GGP~--~~v~~GR~D~~~s~~~~~~~~--l-P~------------p~~~~~~l~ 155 (311)
..||.||+|+|++..+|+.+ .|-. +++.+||.|....... ++.. | |. ....-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtD-v~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTD-VESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcc-hhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 36999999999999999886 6654 5778999998664321 1111 1 11 111234467
Q ss_pred HHHHHcCCCcccchhhcccc-cccccccccccccccCCCCCCCCcchhhhhhhcCCCCCCCCCcccccccCCCCCcccch
Q 021519 156 ERFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDN 234 (311)
Q Consensus 156 ~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~r~~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~fDn 234 (311)
..-+-.+|+..||++|+|+- .+|.-+. + ... .|.- ..|..+.|
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~n~g-------------------------------~-s~~--GVfT--~~pg~Ltn 644 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGANYG-------------------------------G-SKH--GVFT--DRPGVLTN 644 (730)
T ss_pred HHHHHhccCCccceEEEcceEeeccCCC-------------------------------C-Ccc--ceec--cCcccccc
Confidence 77777899999999999963 3332211 1 111 2222 35777788
Q ss_pred HHHHHhhhc--------------------CCC-----cccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHHHhC
Q 021519 235 NYYRNILDN--------------------KGL-----MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSEN 287 (311)
Q Consensus 235 ~Yy~~l~~~--------------------~gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~A~~Km~~l 287 (311)
.||.||+.- .|- -..|..+-+++..|++.+-||.| ++.|.+||+.||.|..++
T Consensus 645 dFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~ 724 (730)
T COG0376 645 DFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNL 724 (730)
T ss_pred hhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhcc
Confidence 888888752 122 24677777888899999999975 789999999999999887
Q ss_pred C
Q 021519 288 N 288 (311)
Q Consensus 288 g 288 (311)
.
T Consensus 725 D 725 (730)
T COG0376 725 D 725 (730)
T ss_pred c
Confidence 4
No 19
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=49.27 E-value=14 Score=28.50 Aligned_cols=29 Identities=14% Similarity=-0.007 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcccccccccc
Q 021519 273 FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 305 (311)
Q Consensus 273 F~~~Fa~A~~Km~~lgv~tg~~Geir~~C~~~n 305 (311)
....|..||.||+.||... .---+|+.|-
T Consensus 3 m~~~F~~am~KlavLG~d~----~~LiDCSdVI 31 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHDR----SDLIDCSDVI 31 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-G----GGSEE-GGGS
T ss_pred HHHHHHHHHHHHHHhcCCh----hhcccchhhc
Confidence 4578999999999997631 1122677664
No 20
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=36.67 E-value=19 Score=30.41 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHcCCCcccchhh-ccccccccccc
Q 021519 149 DSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHC 182 (311)
Q Consensus 149 ~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc 182 (311)
+++.+.+-.|+++||++.++=++ --+|-||++.-
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhhe
Confidence 44566677899999999887554 45999999863
No 21
>PTZ00411 transaldolase-like protein; Provisional
Probab=25.88 E-value=59 Score=31.66 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=40.8
Q ss_pred cchhhHHHHhhhhHH--hhcCCCCccccCCCCCCCCCchhhhhccCCCC---CCCHHHHHHHHHHcCCCc----------
Q 021519 101 VSCADILVLSGRDGV--VALGGPYIPLKTGRRDGRKSRAEILEQYLPDH---NDSMSVVLERFAAIGIDA---------- 165 (311)
Q Consensus 101 VScADilalAa~~av--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~~---------- 165 (311)
|.|-=.+.|....|+ ..+|-..+..++||-+...-.+.......+.. -..+.++.+.|++.|+..
T Consensus 161 I~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~ 240 (333)
T PTZ00411 161 IHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNT 240 (333)
T ss_pred CceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCH
Confidence 444433444443333 33477788999999865432221111111211 234667888888888854
Q ss_pred ccchhhcccc
Q 021519 166 PGLVALLGSH 175 (311)
Q Consensus 166 ~dlVaLsGaH 175 (311)
+++..|.|+|
T Consensus 241 ~qi~~laG~D 250 (333)
T PTZ00411 241 GEILELAGCD 250 (333)
T ss_pred HHHHHHHCCC
Confidence 4555565655
No 22
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=25.24 E-value=42 Score=23.71 Aligned_cols=27 Identities=37% Similarity=0.682 Sum_probs=20.1
Q ss_pred HHHHhh---hhHHhhcCCCCccccCCCCCC
Q 021519 106 ILVLSG---RDGVVALGGPYIPLKTGRRDG 132 (311)
Q Consensus 106 ilalAa---~~av~~~GGP~~~v~~GR~D~ 132 (311)
+|+||+ .|-...|.||.+++-.||--.
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqp 38 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQP 38 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccC
Confidence 456665 356677899999999999543
No 23
>PF04225 OapA: Opacity-associated protein A LysM-like domain; InterPro: IPR007340 This entry includes the Haemophilus influenzae opacity-associated protein. This protein is required for efficient nasopharyngeal mucosal colonization, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation [].; PDB: 2GU1_A.
Probab=21.88 E-value=43 Score=25.81 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCCcccchhhcccccccc
Q 021519 152 SVVLERFAAIGIDAPGLVALLGSHSVGR 179 (311)
Q Consensus 152 ~~l~~~F~~~Gl~~~dlVaLsGaHtiG~ 179 (311)
+.|-..|.+.||+..||-.|+.+.--++
T Consensus 11 DtLs~iF~~~gls~~dl~~v~~~~~~~k 38 (85)
T PF04225_consen 11 DTLSTIFRRAGLSASDLYAVLEADGEAK 38 (85)
T ss_dssp --HHHHHHHTT--HHHHHHHHHHGGGT-
T ss_pred CcHHHHHHHcCCCHHHHHHHHhccCccc
Confidence 5688899999999999999998764443
No 24
>KOG3803 consensus Transcription factor containing C2HC type Zn finger [Transcription]
Probab=20.95 E-value=61 Score=34.27 Aligned_cols=35 Identities=23% Similarity=0.461 Sum_probs=25.3
Q ss_pred CChhHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCcccccc
Q 021519 17 TCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS 64 (311)
Q Consensus 17 sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~ 64 (311)
-||-+|+++|..|...-++- -|=+-|||||--+.+
T Consensus 671 gcpladks~Rslma~~sqeL-------------kCPTPGCDGSGHiTG 705 (968)
T KOG3803|consen 671 GCPLADKSLRSLMAAGSQEL-------------KCPTPGCDGSGHITG 705 (968)
T ss_pred CCchhHHHHHHHHhcccccc-------------cCCCCCCCCCCcccc
Confidence 59999999988776543221 366789999987654
No 25
>PLN02161 beta-amylase
Probab=20.29 E-value=1.4e+02 Score=30.89 Aligned_cols=34 Identities=26% Similarity=0.245 Sum_probs=24.1
Q ss_pred HHHHHhhcHHHHHHHHHHHHHHHH-----hCCCCCCCCCcccc
Q 021519 262 YVKKMAKSQDYFFKEFSRAITLLS-----ENNPLTGTKGEIRK 299 (311)
Q Consensus 262 ~V~~yA~d~~~F~~~Fa~A~~Km~-----~lgv~tg~~Geir~ 299 (311)
-++.|. .|++.|..+|.-+. +|.|=-|+.||.|-
T Consensus 234 plq~Y~----Dfm~SFr~~F~~~~~~~I~eI~VGlGP~GELRY 272 (531)
T PLN02161 234 AVQCYE----DFMLSFSTKFEPYIGNVIEEISIGLGPSGELRY 272 (531)
T ss_pred HHHHHH----HHHHHHHHHHHHHhcCceEEEEeccccCccccC
Confidence 556674 47777777777754 55555689999995
No 26
>PF09533 DUF2380: Predicted lipoprotein of unknown function (DUF2380); InterPro: IPR011755 This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N terminus; the others are predicted lipoproteins. The function is unknown.
Probab=20.03 E-value=77 Score=28.21 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCCcccchhhccccccccccc
Q 021519 151 MSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 182 (311)
Q Consensus 151 ~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc 182 (311)
..+|...|.++|+++.|-+.++..|.-=+.|.
T Consensus 107 a~~la~wF~~~Gi~IHd~ti~Ip~~vH~rIH~ 138 (188)
T PF09533_consen 107 AEELAEWFERRGIDIHDYTIPIPRDVHRRIHG 138 (188)
T ss_pred cHHHHHHHHHcCCChhheeEecCHHHHHHhhC
Confidence 46799999999999999999998765445553
Done!