Query 021520
Match_columns 311
No_of_seqs 336 out of 2105
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 05:19:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021520.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021520hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qsa_A DNAJ homolog DNJ-2; J-d 99.9 1.1E-23 3.8E-28 170.2 4.9 100 23-122 5-109 (109)
2 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.8E-20 6.1E-25 145.9 6.9 76 26-101 10-85 (88)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 2E-20 6.8E-25 141.9 6.7 68 33-100 3-70 (77)
4 2ctp_A DNAJ homolog subfamily 99.8 2.3E-20 8E-25 141.8 6.4 71 31-101 5-75 (78)
5 2dn9_A DNAJ homolog subfamily 99.8 5.5E-20 1.9E-24 140.0 6.7 71 31-101 5-76 (79)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 9.7E-20 3.3E-24 139.5 6.8 72 30-101 6-79 (82)
7 2och_A Hypothetical protein DN 99.8 9.6E-20 3.3E-24 136.8 6.5 69 29-99 4-72 (73)
8 1wjz_A 1700030A21RIK protein; 99.8 4.7E-20 1.6E-24 144.8 4.5 72 31-102 14-92 (94)
9 2ctr_A DNAJ homolog subfamily 99.8 9.2E-20 3.1E-24 141.8 6.1 69 31-99 5-73 (88)
10 2yua_A Williams-beuren syndrom 99.8 2.4E-19 8.3E-24 142.4 6.4 74 29-102 13-87 (99)
11 2ctq_A DNAJ homolog subfamily 99.8 2.2E-19 7.5E-24 145.8 5.5 71 31-101 18-89 (112)
12 1bq0_A DNAJ, HSP40; chaperone, 99.8 5E-19 1.7E-23 141.6 6.1 70 32-101 2-72 (103)
13 2ctw_A DNAJ homolog subfamily 99.8 7.7E-19 2.6E-23 142.0 6.6 74 27-100 11-85 (109)
14 2dmx_A DNAJ homolog subfamily 99.8 5.4E-19 1.9E-23 138.4 5.5 71 31-101 7-79 (92)
15 2lgw_A DNAJ homolog subfamily 99.7 7.8E-19 2.7E-23 139.8 5.8 69 33-101 2-72 (99)
16 2o37_A Protein SIS1; HSP40, J- 99.7 1.3E-18 4.5E-23 136.4 6.1 69 29-99 4-72 (92)
17 2ys8_A RAB-related GTP-binding 99.7 2.3E-18 7.8E-23 134.6 5.1 62 32-93 26-87 (90)
18 3apq_A DNAJ homolog subfamily 99.7 1.2E-17 4.1E-22 147.3 5.7 69 33-101 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.7 1.4E-17 4.8E-22 142.3 5.6 69 31-99 8-83 (155)
20 3hho_A CO-chaperone protein HS 99.7 3E-17 1E-21 143.2 5.4 69 31-99 2-78 (174)
21 1iur_A KIAA0730 protein; DNAJ 99.6 3.3E-17 1.1E-21 127.8 2.2 68 27-94 10-79 (88)
22 1gh6_A Large T antigen; tumor 99.6 1.8E-17 6.1E-22 135.2 0.6 64 32-98 7-72 (114)
23 1faf_A Large T antigen; J doma 99.6 9.6E-17 3.3E-21 122.6 4.5 62 33-97 11-74 (79)
24 1n4c_A Auxilin; four helix bun 99.6 7.9E-17 2.7E-21 141.1 4.5 69 26-94 110-182 (182)
25 3lz8_A Putative chaperone DNAJ 99.6 1.8E-17 6.2E-22 157.8 0.0 68 32-99 27-94 (329)
26 2qwo_B Putative tyrosine-prote 99.6 9E-17 3.1E-21 126.2 3.6 61 27-87 27-91 (92)
27 2pf4_E Small T antigen; PP2A, 99.6 4.6E-17 1.6E-21 141.7 1.9 65 32-99 10-76 (174)
28 1fpo_A HSC20, chaperone protei 99.6 1.7E-16 5.8E-21 138.0 4.8 66 34-99 2-75 (171)
29 3bvo_A CO-chaperone protein HS 99.6 1.6E-16 5.6E-21 142.1 3.6 68 32-99 42-117 (207)
30 3ag7_A Putative uncharacterize 99.6 2.4E-16 8.4E-21 126.9 2.8 64 25-89 33-104 (106)
31 3uo3_A J-type CO-chaperone JAC 99.6 9.6E-16 3.3E-20 134.4 3.2 67 30-98 8-81 (181)
32 2guz_A Mitochondrial import in 99.5 1.1E-15 3.6E-20 114.4 2.2 57 32-91 13-70 (71)
33 3apo_A DNAJ homolog subfamily 99.5 1E-15 3.5E-20 159.1 0.5 75 27-101 15-90 (780)
34 2y4t_A DNAJ homolog subfamily 99.0 2.7E-10 9.4E-15 107.0 4.8 66 32-97 381-450 (450)
35 2guz_B Mitochondrial import in 98.6 2E-08 7E-13 73.6 4.4 53 33-88 4-59 (65)
36 2pzi_A Probable serine/threoni 83.0 0.89 3E-05 46.0 4.2 49 29-84 625-675 (681)
No 1
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.88 E-value=1.1e-23 Score=170.23 Aligned_cols=100 Identities=36% Similarity=0.673 Sum_probs=87.5
Q ss_pred ccccccccCccCcccccCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC----cchHHHHHHHHHHHhhccchhHHHhcccc
Q 021520 23 SPSVAIYCDEDDCYDLLGVSQNA-NSSEIKKAYYKLSLKYHPDKNPD----PDSRKLFVKIANAYEILKDEATREQYDYA 97 (311)
Q Consensus 23 ~~~~~~~~~~~d~Y~vLgv~~~a-s~~eIkkaYr~la~~~HPDk~~~----~~a~~~f~~I~~AY~vL~d~~~R~~YD~~ 97 (311)
.....++|+..|||+||||+++| |.++||+|||++++++|||++++ +.+.+.|++|++||++|+||.+|+.||..
T Consensus 5 ~ll~~~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~ 84 (109)
T 2qsa_A 5 GFAPELYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYY 84 (109)
T ss_dssp GCCTTSTTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 34567889999999999999999 99999999999999999999986 56889999999999999999999999999
Q ss_pred ccCCchhhcchhhhhhhhcCCCCCh
Q 021520 98 IAHPEEVFYNAARYYHAYYGHKTDP 122 (311)
Q Consensus 98 ~~~~~~~~~~~~~yy~~~~g~~~d~ 122 (311)
+.++.+.+.+...||+..+++++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (109)
T 2qsa_A 85 LDHPDQRFYNYYQYYRLRAAPKVDL 109 (109)
T ss_dssp HHCTTCHHHHHHHHHHHC-------
T ss_pred ccCchHHHHHHHHHHHHHhccccCC
Confidence 9999999999999999999887764
No 2
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.8e-20 Score=145.85 Aligned_cols=76 Identities=43% Similarity=0.701 Sum_probs=70.4
Q ss_pred cccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 26 VAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 26 ~~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
..+.+...|||+||||+++++.++||+|||++++++|||+++++.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 10 ~~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 10 QSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CCCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred hhhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 3455678899999999999999999999999999999999998889999999999999999999999999987654
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.81 E-value=2e-20 Score=141.86 Aligned_cols=68 Identities=41% Similarity=0.743 Sum_probs=64.9
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhccccccC
Q 021520 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (311)
Q Consensus 33 ~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~ 100 (311)
.|||+||||++++|.++|++|||++++++|||+++++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 68999999999999999999999999999999999888999999999999999999999999987653
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.3e-20 Score=141.81 Aligned_cols=71 Identities=42% Similarity=0.762 Sum_probs=67.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
...|||+||||+++++.++|++|||++++++|||+++.+.+.+.|+.|++||++|+||.+|..||..+..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46799999999999999999999999999999999998889999999999999999999999999887654
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=5.5e-20 Score=139.98 Aligned_cols=71 Identities=51% Similarity=0.878 Sum_probs=65.9
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
...|||+||||+++++.++||+|||++++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3579999999999999999999999999999999998 4678999999999999999999999999887654
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=9.7e-20 Score=139.54 Aligned_cols=72 Identities=44% Similarity=0.744 Sum_probs=66.0
Q ss_pred cCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 30 CDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 30 ~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~--~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
.+..|||+||||+++++.++||+|||++++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3567999999999999999999999999999999999863 67889999999999999999999999987654
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.79 E-value=9.6e-20 Score=136.77 Aligned_cols=69 Identities=48% Similarity=0.817 Sum_probs=62.2
Q ss_pred ccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 29 YCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 29 ~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
++.+.|||+||||++++|.++|++|||++++++|||++++ +.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 4567899999999999999999999999999999999975 36899999999999999999999998753
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.79 E-value=4.7e-20 Score=144.75 Aligned_cols=72 Identities=38% Similarity=0.677 Sum_probs=66.2
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-------cchHHHHHHHHHHHhhccchhHHHhccccccCCc
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-------PDSRKLFVKIANAYEILKDEATREQYDYAIAHPE 102 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~-------~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~~ 102 (311)
...|||+||||+++|+.+|||+|||++++++|||+++. +.+.+.|++|++||++|+||.+|..||..+..+.
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~~ 92 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSGPS 92 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCCSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccCCC
Confidence 46799999999999999999999999999999999874 4578999999999999999999999999877654
No 9
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=9.2e-20 Score=141.83 Aligned_cols=69 Identities=46% Similarity=0.768 Sum_probs=65.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
...|||+||||+++|+.++||+|||++++++|||+++++.+.+.|+.|++||++|+||.+|..||..+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 357999999999999999999999999999999999988899999999999999999999999998764
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.4e-19 Score=142.44 Aligned_cols=74 Identities=35% Similarity=0.666 Sum_probs=67.1
Q ss_pred ccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHhhccchhHHHhccccccCCc
Q 021520 29 YCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHPE 102 (311)
Q Consensus 29 ~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~~ 102 (311)
.....|||+||||+++|+.++||+|||+|++++|||+++ ++.+.++|++|++||++|+||.+|..||..+...+
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e 87 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDE 87 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHH
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccc
Confidence 345789999999999999999999999999999999997 56789999999999999999999999998765433
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.2e-19 Score=145.81 Aligned_cols=71 Identities=34% Similarity=0.578 Sum_probs=66.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
...|||+||||+++|+.++||+|||++++++|||+++ ++.+.+.|++|++||++|+||.+|..||..+..+
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 4589999999999999999999999999999999998 5789999999999999999999999999876543
No 12
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.76 E-value=5e-19 Score=141.55 Aligned_cols=70 Identities=41% Similarity=0.734 Sum_probs=65.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~-~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
..|||+||||+++||.++||+|||+|++++|||++++ +.+.++|++|++||++|+||.+|..||..+...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 3699999999999999999999999999999999984 678999999999999999999999999877644
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=7.7e-19 Score=142.01 Aligned_cols=74 Identities=45% Similarity=0.727 Sum_probs=67.7
Q ss_pred ccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHHHhhccchhHHHhccccccC
Q 021520 27 AIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (311)
Q Consensus 27 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~-~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~ 100 (311)
.+.+...|+|+||||+++|+.++||+|||+|++++|||++++ +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 11 SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred ccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 455677899999999999999999999999999999999984 67899999999999999999999999987643
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.4e-19 Score=138.38 Aligned_cols=71 Identities=44% Similarity=0.753 Sum_probs=65.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~--~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
+..|||+||||+++++.++||+|||+|++++|||+++.. .+.+.|+.|++||++|+||.+|..||..+..+
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 457999999999999999999999999999999999853 67899999999999999999999999876543
No 15
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=7.8e-19 Score=139.77 Aligned_cols=69 Identities=42% Similarity=0.693 Sum_probs=63.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 33 ~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~--~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
.|||+||||+++||.++||+|||++++++|||++++. .+.+.|+.|++||++|+||.+|..||..+..+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999999999999999853 47899999999999999999999999876543
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.3e-18 Score=136.41 Aligned_cols=69 Identities=48% Similarity=0.701 Sum_probs=63.1
Q ss_pred ccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 29 YCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 29 ~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
++...|+|+||||++++|.++|++|||++++++|||+++.. .++|++|++||++|+||.+|..||..+.
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 34678999999999999999999999999999999999753 5799999999999999999999998654
No 17
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.3e-18 Score=134.65 Aligned_cols=62 Identities=35% Similarity=0.551 Sum_probs=59.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHh
Q 021520 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQ 93 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~ 93 (311)
..|||+||||+++|+.++||+|||+|++++|||+++++.+.++|++|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 48999999999999999999999999999999999988899999999999999999998865
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.69 E-value=1.2e-17 Score=147.35 Aligned_cols=69 Identities=51% Similarity=0.817 Sum_probs=64.5
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 33 ~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
.|||+||||+++||.++||+|||++++++|||+++ ++++.++|+.|++||++|+||.+|+.||..+..+
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 58999999999999999999999999999999997 5778999999999999999999999999877543
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=1.4e-17 Score=142.25 Aligned_cols=69 Identities=38% Similarity=0.686 Sum_probs=63.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------chHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP-------DSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-------~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
...|||+||||+++++.++||+|||++++++|||++++. .+.+.|+.|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 457999999999999999999999999999999999854 257899999999999999999999997653
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.67 E-value=3e-17 Score=143.16 Aligned_cols=69 Identities=22% Similarity=0.449 Sum_probs=62.0
Q ss_pred CccCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 31 DEDDCYDLLGVSQNAN--SSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 31 ~~~d~Y~vLgv~~~as--~~eIkkaYr~la~~~HPDk~~~~~------a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
...|||+||||+++++ .++|+++||++++++|||++++.. +.+.|..|++||++|+||.+|..||..+.
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 4679999999999998 999999999999999999998643 66899999999999999999999998664
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.64 E-value=3.3e-17 Score=127.77 Aligned_cols=68 Identities=26% Similarity=0.321 Sum_probs=60.2
Q ss_pred ccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHHHhhccchhHHHhc
Q 021520 27 AIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQY 94 (311)
Q Consensus 27 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~--~a~~~f~~I~~AY~vL~d~~~R~~Y 94 (311)
.......++|+||||+++||.+|||+|||+|+++||||++++. .+.++|+.|++||++|+|...|..+
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3445668999999999999999999999999999999999863 5889999999999999998777443
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.64 E-value=1.8e-17 Score=135.21 Aligned_cols=64 Identities=27% Similarity=0.373 Sum_probs=59.4
Q ss_pred ccCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhccccc
Q 021520 32 EDDCYDLLGVSQNANS--SEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAI 98 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as~--~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~ 98 (311)
..++|+||||+++|+. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 3689999999999998 999999999999999999986 468999999999999999999999754
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.64 E-value=9.6e-17 Score=122.58 Aligned_cols=62 Identities=21% Similarity=0.393 Sum_probs=57.1
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccc
Q 021520 33 DDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYA 97 (311)
Q Consensus 33 ~d~Y~vLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~ 97 (311)
.++|+||||+++ +|.++||+|||+|++++|||++++ .++|++|++||++|+|+..|..++.+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~~g 74 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMNLG 74 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHhcC
Confidence 589999999999 999999999999999999999864 57999999999999999999986643
No 24
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.64 E-value=7.9e-17 Score=141.14 Aligned_cols=69 Identities=19% Similarity=0.444 Sum_probs=62.2
Q ss_pred cccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcc----hHHHHHHHHHHHhhccchhHHHhc
Q 021520 26 VAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD----SRKLFVKIANAYEILKDEATREQY 94 (311)
Q Consensus 26 ~~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~----a~~~f~~I~~AY~vL~d~~~R~~Y 94 (311)
..+.+...|+|+||||+++||.++||+|||++++++|||++++.. +.+.|+.|++||++|+|+.+|+.|
T Consensus 110 ~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 110 HTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp GGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 344455579999999999999999999999999999999998643 789999999999999999999887
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.63 E-value=1.8e-17 Score=157.82 Aligned_cols=68 Identities=40% Similarity=0.664 Sum_probs=0.0
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
..|||+||||+++||.+|||+|||+|+++||||+|+++.|.++|++|++||++|+||.+|+.||.++.
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp --------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 47999999999999999999999999999999999988899999999999999999999999998744
No 26
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=9e-17 Score=126.20 Aligned_cols=61 Identities=18% Similarity=0.401 Sum_probs=53.5
Q ss_pred ccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc----chHHHHHHHHHHHhhccc
Q 021520 27 AIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP----DSRKLFVKIANAYEILKD 87 (311)
Q Consensus 27 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~----~a~~~f~~I~~AY~vL~d 87 (311)
.+.....++|++|||+++||.+|||+|||++++++|||+|++. .|.++|+.|++||++|.+
T Consensus 27 ~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 27 TVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp GTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 3333336899999999999999999999999999999999864 278899999999999986
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.63 E-value=4.6e-17 Score=141.74 Aligned_cols=65 Identities=26% Similarity=0.354 Sum_probs=57.7
Q ss_pred ccCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 32 EDDCYDLLGVSQNAN--SSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as--~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
..|+|+||||+++|+ .++||+|||++++++|||+++++ ++|++|++||++|+||.+|+.||.+++
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 69999999999999999999863 689999999999999999999999875
No 28
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=1.7e-16 Score=138.01 Aligned_cols=66 Identities=21% Similarity=0.435 Sum_probs=60.9
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 34 DCYDLLGVSQNA--NSSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 34 d~Y~vLgv~~~a--s~~eIkkaYr~la~~~HPDk~~~~~------a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
|||+||||++++ |.++|+++||++++++|||++++.. +.+.|..|++||++|+||.+|..||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 9999999999999999999998532 45789999999999999999999998765
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.61 E-value=1.6e-16 Score=142.07 Aligned_cols=68 Identities=21% Similarity=0.335 Sum_probs=60.7
Q ss_pred ccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc------chHHHHHHHHHHHhhccchhHHHhcccccc
Q 021520 32 EDDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDP------DSRKLFVKIANAYEILKDEATREQYDYAIA 99 (311)
Q Consensus 32 ~~d~Y~vLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~------~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~ 99 (311)
..|||+||||+++ +|.++||++||+|++++|||++++. .+.++|+.|++||++|+||.+|+.||..+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 5799999999996 7999999999999999999999853 256789999999999999999999996543
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=2.4e-16 Score=126.88 Aligned_cols=64 Identities=17% Similarity=0.236 Sum_probs=55.7
Q ss_pred ccccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chHHHHHHHHHHHhhccchh
Q 021520 25 SVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--------DSRKLFVKIANAYEILKDEA 89 (311)
Q Consensus 25 ~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~--------~a~~~f~~I~~AY~vL~d~~ 89 (311)
...+.+.+.|||+|||++. ||.++||+|||++++++|||||+++ .|.++|+.|++||++|+|+.
T Consensus 33 l~~~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 33 LQYILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp GGGTSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3345566789999999996 9999999999999999999998742 36889999999999999985
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.55 E-value=9.6e-16 Score=134.44 Aligned_cols=67 Identities=25% Similarity=0.415 Sum_probs=61.1
Q ss_pred cCccCccccc------CCCC-CCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHHHhccccc
Q 021520 30 CDEDDCYDLL------GVSQ-NANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAI 98 (311)
Q Consensus 30 ~~~~d~Y~vL------gv~~-~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~ 98 (311)
+...|||+|| |+++ ++|.++||+|||+|++++|||++++ +.+.|..|++||++|+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3457999999 4665 8999999999999999999999986 7788999999999999999999999866
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1.1e-15 Score=114.35 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=51.5
Q ss_pred ccCcccccCCCC-CCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccchhHH
Q 021520 32 EDDCYDLLGVSQ-NANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATR 91 (311)
Q Consensus 32 ~~d~Y~vLgv~~-~as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~~~R 91 (311)
..++|+||||++ ++|.++|++|||+|++++|||+++ ..+.|++|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g---~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG---SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC---CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHhhhhhc
Confidence 368999999999 799999999999999999999975 346999999999999998665
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.52 E-value=1e-15 Score=159.06 Aligned_cols=75 Identities=47% Similarity=0.723 Sum_probs=40.6
Q ss_pred ccccCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHhhccchhHHHhccccccCC
Q 021520 27 AIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (311)
Q Consensus 27 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~~~~~ 101 (311)
.....+.|||+||||+++||.+|||+|||+|++++|||+++ ++++.++|++|++||++|+||.+|+.||.++..+
T Consensus 15 ~~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 15 IEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp --------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 34556789999999999999999999999999999999997 5678999999999999999999999999977643
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.97 E-value=2.7e-10 Score=107.01 Aligned_cols=66 Identities=42% Similarity=0.723 Sum_probs=56.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCcc----hHHHHHHHHHHHhhccchhHHHhcccc
Q 021520 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD----SRKLFVKIANAYEILKDEATREQYDYA 97 (311)
Q Consensus 32 ~~d~Y~vLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~----a~~~f~~I~~AY~vL~d~~~R~~YD~~ 97 (311)
..++|.+||+.++++.++|+++|+++++++|||+.+++. +.+.|+.|++||++|+||++|..||.+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 348999999999999999999999999999999998654 889999999999999999999999973
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.64 E-value=2e-08 Score=73.58 Aligned_cols=53 Identities=25% Similarity=0.230 Sum_probs=45.5
Q ss_pred cCcccccCCCCC---CCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhhccch
Q 021520 33 DDCYDLLGVSQN---ANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDE 88 (311)
Q Consensus 33 ~d~Y~vLgv~~~---as~~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~vL~d~ 88 (311)
..-|.||||+++ ++.++|+++||+|...+|||+..++ -...+|++|.++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHHH
Confidence 345889999999 9999999999999999999997643 4566899999998754
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=82.96 E-value=0.89 Score=45.99 Aligned_cols=49 Identities=10% Similarity=0.156 Sum_probs=37.7
Q ss_pred ccCccCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHhh
Q 021520 29 YCDEDDCYDLLGVSQNANS--SEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEI 84 (311)
Q Consensus 29 ~~~~~d~Y~vLgv~~~as~--~eIkkaYr~la~~~HPDk~~~~~a~~~f~~I~~AY~v 84 (311)
..+..|+|.+||++.+... .+|++|||++++.-+++ .+++..|..|..|
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 3455679999999776655 77999999999966554 4678888887765
Done!