Query 021521
Match_columns 311
No_of_seqs 154 out of 700
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 05:20:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di4_A Zinc protease, cell div 100.0 7.7E-35 2.6E-39 268.1 16.7 152 126-305 7-202 (238)
2 2ce7_A Cell division protein F 99.9 8.1E-26 2.8E-30 224.8 16.6 152 126-304 263-458 (476)
3 2dhr_A FTSH; AAA+ protein, hex 99.9 7.3E-24 2.5E-28 211.9 16.4 151 125-304 277-468 (499)
4 3b4r_A Putative zinc metallopr 94.5 0.018 6.2E-07 51.9 2.8 27 137-163 50-76 (224)
5 2jsd_A Matrix metalloproteinas 71.2 1.6 5.6E-05 36.2 1.8 15 133-147 106-120 (160)
6 2xs4_A Karilysin protease; hyd 68.9 1.9 6.6E-05 36.2 1.8 15 133-147 113-127 (167)
7 3gp4_A Transcriptional regulat 67.1 27 0.00093 28.7 8.5 66 240-305 43-117 (142)
8 1hy7_A Stromelysin-1, MMP-3; m 66.6 2.3 7.9E-05 36.1 1.8 15 133-147 111-125 (173)
9 2ovx_A Matrix metalloproteinas 66.4 1.9 6.6E-05 36.2 1.3 15 133-147 109-123 (159)
10 3gpv_A Transcriptional regulat 66.1 13 0.00045 30.8 6.4 67 240-306 57-132 (148)
11 1q08_A Zn(II)-responsive regul 63.7 20 0.00067 27.0 6.5 49 241-289 1-58 (99)
12 1cge_A Fibroblast collagenase; 63.3 2.4 8.3E-05 35.8 1.3 14 134-147 110-123 (168)
13 1hv5_A Stromelysin 3; inhibiti 62.4 2.5 8.7E-05 35.5 1.3 15 133-147 111-125 (165)
14 1i76_A MMP-8;, neutrophil coll 59.6 3.8 0.00013 34.5 1.9 15 133-147 110-124 (163)
15 1slm_A Stromelysin-1; hydrolas 53.1 4.4 0.00015 36.9 1.3 15 134-148 194-208 (255)
16 1y93_A Macrophage metalloelast 52.4 4.7 0.00016 33.8 1.3 15 133-147 106-120 (159)
17 2y6d_A Matrilysin; hydrolase; 51.7 5.9 0.0002 33.7 1.8 15 133-147 113-127 (174)
18 1rm8_A MMP-16, matrix metallop 51.0 6.2 0.00021 33.1 1.8 16 132-147 114-129 (169)
19 3ayu_A 72 kDa type IV collagen 50.8 5.8 0.0002 33.5 1.6 14 134-147 113-126 (167)
20 3cqb_A Probable protease HTPX 48.5 10 0.00034 29.8 2.5 21 130-150 78-98 (107)
21 1sat_A Serratia protease; para 47.1 8.3 0.00028 38.0 2.3 15 133-147 168-182 (471)
22 1g9k_A Serralysin; beta jelly 46.3 8.7 0.0003 37.9 2.3 15 134-148 162-176 (463)
23 1kap_P Alkaline protease; calc 45.2 9.3 0.00032 37.9 2.3 14 134-147 178-191 (479)
24 1ich_A TNF-1, tumor necrosis f 43.7 60 0.002 26.4 6.5 62 245-307 27-99 (112)
25 1k7i_A PROC, secreted protease 43.3 10 0.00035 37.5 2.3 15 133-147 180-194 (479)
26 2cki_A Ulilysin; metalloprotea 42.5 8 0.00027 35.5 1.3 19 208-226 239-257 (262)
27 3ezq_A Tumor necrosis factor r 41.7 89 0.003 25.4 7.3 49 243-291 20-78 (115)
28 1c7k_A NCNP, zinc endoprotease 40.9 13 0.00043 31.1 2.1 14 134-147 76-89 (132)
29 1r8e_A Multidrug-efflux transp 40.0 40 0.0014 29.5 5.4 66 240-305 47-115 (278)
30 1fad_A Protein (FADD protein); 38.5 1.3E+02 0.0043 22.8 8.0 61 245-306 27-97 (99)
31 830c_A MMP-13, MMP-13; matrix 35.6 12 0.00042 31.8 1.3 15 133-147 111-125 (168)
32 1r8d_A Transcription activator 35.2 58 0.002 25.1 5.1 48 241-288 44-93 (109)
33 1q06_A Transcriptional regulat 34.8 1.4E+02 0.0048 23.9 7.6 44 241-284 42-93 (135)
34 3sks_A Putative oligoendopepti 31.7 28 0.00096 34.8 3.3 18 137-154 355-372 (567)
35 3ma2_D Matrix metalloproteinas 31.4 16 0.00055 31.6 1.3 14 133-146 120-133 (181)
36 3ba0_A Macrophage metalloelast 31.1 18 0.00063 34.2 1.8 15 134-148 106-120 (365)
37 3ahn_A Oligopeptidase, PZ pept 29.6 32 0.0011 33.9 3.3 22 137-158 352-374 (564)
38 3qao_A LMO0526 protein, MERR-l 29.4 57 0.0019 29.3 4.6 25 240-264 44-70 (249)
39 3oq9_A Tumor necrosis factor r 29.4 49 0.0017 25.5 3.6 48 244-291 13-70 (86)
40 3edh_A Bone morphogenetic prot 27.8 22 0.00076 31.1 1.6 18 135-152 87-104 (201)
41 3lqb_A Hatching enzyme, LOC792 26.6 24 0.00083 31.0 1.6 18 135-152 93-110 (199)
42 2o3e_A Neurolysin; thermolysin 26.2 33 0.0011 35.0 2.7 17 137-153 470-486 (678)
43 2o36_A ThiMet oligopeptidase; 26.1 39 0.0013 34.4 3.3 18 137-154 454-471 (674)
44 2yqf_A Ankyrin-1; death domain 25.7 78 0.0027 24.7 4.3 46 246-291 32-87 (111)
45 1s7o_A Hypothetical UPF0122 pr 25.4 2.2E+02 0.0075 22.2 7.0 29 247-275 42-70 (113)
46 1uze_A Angiotensin converting 24.9 27 0.00092 35.1 1.8 15 137-151 343-357 (589)
47 2vz4_A Tipal, HTH-type transcr 24.6 71 0.0024 24.6 3.9 49 240-288 42-92 (108)
48 1l6j_A Matrix metalloproteinas 24.6 22 0.00077 35.0 1.1 14 134-147 375-388 (425)
49 3dte_A IRRE protein; radiotole 24.0 48 0.0016 31.0 3.2 22 130-151 91-112 (301)
50 2x96_A Angiotensin converting 23.7 29 0.001 35.2 1.8 15 134-148 344-358 (598)
51 3lq0_A Proastacin; metallopept 23.7 29 0.001 31.2 1.6 36 135-170 120-157 (235)
52 3ezq_B Protein FADD; apoptosis 23.5 2.7E+02 0.0093 22.3 7.3 46 246-291 20-75 (122)
53 1eak_A 72 kDa type IV collagen 23.1 25 0.00085 34.6 1.1 15 134-148 365-379 (421)
54 4aw6_A CAAX prenyl protease 1 22.6 45 0.0015 33.2 2.8 23 130-152 324-346 (482)
55 2zhg_A Redox-sensitive transcr 22.5 1.2E+02 0.0041 25.1 5.1 48 240-287 51-107 (154)
56 2l2l_A Transcriptional repress 22.4 90 0.0031 21.4 3.4 30 23-54 2-31 (43)
57 2of5_H Leucine-rich repeat and 21.5 1.2E+02 0.004 24.1 4.7 47 246-292 27-84 (118)
58 1wpn_A Manganese-dependent ino 21.1 2E+02 0.0069 23.7 6.3 47 218-264 138-184 (188)
59 1su3_A Interstitial collagenas 20.6 32 0.0011 33.6 1.3 14 134-147 192-205 (450)
60 2gf5_A FADD protein; death dom 20.3 1.6E+02 0.0054 25.1 5.6 48 246-293 112-169 (191)
61 3t15_A Ribulose bisphosphate c 20.1 33 0.0011 30.7 1.2 23 129-151 260-282 (293)
62 3hh0_A Transcriptional regulat 20.1 1.8E+02 0.0061 23.8 5.6 20 241-260 46-67 (146)
No 1
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=100.00 E-value=7.7e-35 Score=268.07 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=120.2
Q ss_pred ccCCCChhHHHHHHHHHHhHHHHHHHhC--CCCCceecCchhhhccccccccceEEecchhhHHHHHhhhhcccCCCCCC
Q 021521 126 SYVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADARKQKKDTGQVGS 203 (311)
Q Consensus 126 ~~~~ls~eer~RIA~HEAGHaLVAyLLg--~PV~~yTI~~~ealr~G~~~~GG~~f~~~e~~~e~~~ar~~~~dd~~~~~ 203 (311)
.++.+|+++|++|||||||||||||+++ +||++|||.| +|. +.|.|.|.+.+
T Consensus 7 k~~~~s~~ek~~vAyHEAGHAlva~~l~~~~pV~KVTIiP-----RG~-alG~t~~~P~e-------------------- 60 (238)
T 2di4_A 7 SHMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIP-----RGM-ALGVTQQLPIE-------------------- 60 (238)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC-----------------------------------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEee-----cCC-cceEEEeCCcc--------------------
Confidence 5678899999999999999999999999 7999999999 563 44555544321
Q ss_pred CCccccCCHHHHHHHHHHHhhHHHHHHHHh--CC-ccchhhHHHHHHHHHHH----hCCCch------------------
Q 021521 204 WGNRGEISVKTLNNFSCVILGGLVAEHLVF--GH-SEGHYSDINKLDKVFQW----LGYNKS------------------ 258 (311)
Q Consensus 204 ~l~~~~~s~~~L~r~~~VlLAGrAAE~Lvf--G~-atGg~~Dl~qat~lar~----lGms~~------------------ 258 (311)
+++.+|+++|.+.++|+|||||||+|+| |+ ++|++||++++|++++. ||||.+
T Consensus 61 --d~~~~tk~~l~~~i~v~LgGRaAEelifG~g~vttGA~~Dl~~AT~iAr~MV~~~GMs~~lG~v~~~~~~~~flg~~~ 138 (238)
T 2di4_A 61 --DKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMT 138 (238)
T ss_dssp ---CCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------
T ss_pred --cccccCHHHHHHHHHHHHhHHHHHHHHhCCCCcccChHhHHHHHHHHHHHHHHHhCCCCCCCceeecCCccccccccc
Confidence 4577899999999999999999999999 65 68999999999998765 799752
Q ss_pred -----------hHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhhccH--HHHHHHHHHh
Q 021521 259 -----------EADSQ----VKWAALNTVLISHHHIQVRSRLAEAMALGRSI--GSCIHSIENA 305 (311)
Q Consensus 259 -----------~~d~e----vr~A~~~A~~LL~~hr~~le~LAeaLle~esv--~~C~~~Ie~~ 305 (311)
.+|.+ +++||.+|++||++|++.+++||++|+++||| ++|.++|+..
T Consensus 139 ~~~~~Se~ta~~iD~Ev~~il~~ay~~a~~iL~~nr~~L~~lA~~Lle~EtL~~~ei~~il~~~ 202 (238)
T 2di4_A 139 TAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLY 202 (238)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHccC
Confidence 24455 45999999999999999999999999999999 8888888753
No 2
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.93 E-value=8.1e-26 Score=224.81 Aligned_cols=152 Identities=18% Similarity=0.215 Sum_probs=116.8
Q ss_pred ccCCCChhHHHHHHHHHHhHHHHHHHhC--CCCCceecCchhhhccccccccceEEecchhhHHHHHhhhhcccCCCCCC
Q 021521 126 SYVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADARKQKKDTGQVGS 203 (311)
Q Consensus 126 ~~~~ls~eer~RIA~HEAGHaLVAyLLg--~PV~~yTI~~~ealr~G~~~~GG~~f~~~e~~~e~~~ar~~~~dd~~~~~ 203 (311)
.+..++++++++++|||+||++|+++++ .|++++||.| +|....|.|.+.+.+
T Consensus 263 ~~~~~~~~e~~~~a~~e~G~a~~~~~l~~~~~~~~~~i~p-----rg~~alg~~~~~p~~-------------------- 317 (476)
T 2ce7_A 263 KSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIP-----RGYKALGYTLHLPEE-------------------- 317 (476)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC-----------------------------------------
T ss_pred cchhhhcchhhhhHHHHhhhHHHhhccCCccccceeeeec-----CcccccceEEEcCcc--------------------
Confidence 3457899999999999999999999998 6999999998 563234455444321
Q ss_pred CCccccCCHHHHHHHHHHHhhHHHHHHHHhCC-ccchhhHHHHHHHHHHH----hCCCch--------------------
Q 021521 204 WGNRGEISVKTLNNFSCVILGGLVAEHLVFGH-SEGHYSDINKLDKVFQW----LGYNKS-------------------- 258 (311)
Q Consensus 204 ~l~~~~~s~~~L~r~~~VlLAGrAAE~LvfG~-atGg~~Dl~qat~lar~----lGms~~-------------------- 258 (311)
+++.+|+++|...++|+|||||||+++||+ ++|++||++++|++++. ||||.+
T Consensus 318 --~~~~~~~~~l~~~i~~~l~Gr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~ 395 (476)
T 2ce7_A 318 --DKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEIT 395 (476)
T ss_dssp ---CCSCBHHHHHHHHHHHTHHHHHHHHHHSSCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC------------
T ss_pred --cccccCHHHHHHHHHHHHhHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHhCCCCcCCceeecCCCcccccccccc
Confidence 357789999999999999999999999998 57999999999999865 798741
Q ss_pred -----------hHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhhccH--HHHHHHHHH
Q 021521 259 -----------EADSQ----VKWAALNTVLISHHHIQVRSRLAEAMALGRSI--GSCIHSIEN 304 (311)
Q Consensus 259 -----------~~d~e----vr~A~~~A~~LL~~hr~~le~LAeaLle~esv--~~C~~~Ie~ 304 (311)
.+|++ ++.||.+|++||++|++.+++||++|+++||| +++.++++.
T Consensus 396 ~~~~~s~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 458 (476)
T 2ce7_A 396 RLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE 458 (476)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC-
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 13444 45899999999999999999999999999999 666666654
No 3
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.91 E-value=7.3e-24 Score=211.86 Aligned_cols=151 Identities=19% Similarity=0.185 Sum_probs=124.7
Q ss_pred cccCCCChhHHHHHHHHHHhHHHHHHHhC--CCCCceecCchhhhccccccccceEEecchhhHHHHHhhhhcccCCCCC
Q 021521 125 GSYVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADARKQKKDTGQVG 202 (311)
Q Consensus 125 ~~~~~ls~eer~RIA~HEAGHaLVAyLLg--~PV~~yTI~~~ealr~G~~~~GG~~f~~~e~~~e~~~ar~~~~dd~~~~ 202 (311)
..++.++++++++++|||+||++|+|+++ .||+++||.| +|. . .|+.+ |. +.
T Consensus 277 ~~~~~~~~~e~~~~a~~e~g~av~~~~l~~~~~v~~~~i~p-----r~~-~-~g~~~--p~---q~-------------- 330 (499)
T 2dhr_A 277 KKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVP-----RGR-A-LGFMM--PR---RE-------------- 330 (499)
T ss_dssp SSCCCCCTTHHHHHHHHHHHHHHHHCCSSSCCCCCCEESCC-----SSC-T-TCSSH--HH---HT--------------
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHhhcCCCCeeeEEEeec-----CCC-c-Ccccc--cc---hh--------------
Confidence 34567899999999999999999999997 6999999998 442 2 34333 22 11
Q ss_pred CCCccccCCHHHHHHHHHHHhhHHHHHHHHhCC-ccchhhHHHHHHHHHHH----hCCCch-------------------
Q 021521 203 SWGNRGEISVKTLNNFSCVILGGLVAEHLVFGH-SEGHYSDINKLDKVFQW----LGYNKS------------------- 258 (311)
Q Consensus 203 ~~l~~~~~s~~~L~r~~~VlLAGrAAE~LvfG~-atGg~~Dl~qat~lar~----lGms~~------------------- 258 (311)
+.+.+|+.++...++++|||||||+++||+ ++|++||++++|++++. ||||.+
T Consensus 331 ---~~~~~t~~~l~~~i~~~lgGr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~ 407 (499)
T 2dhr_A 331 ---DMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDV 407 (499)
T ss_dssp ---TCCCCCHHHHHHHHHHHHHHHHHHHHHSCSCCBCCCHHHHHHHHHHHHHHTTSCCCSSSCSCCCCCCCCCSSCCCCC
T ss_pred ---hhhccCHHHHHHHHHHHhhhHhHHHhhhcccCcccHHHHHHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccc
Confidence 456779999999999999999999999998 57999999999998875 788752
Q ss_pred ---------hHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhhccH--HHHHHHHHH
Q 021521 259 ---------EADSQ----VKWAALNTVLISHHHIQVRSRLAEAMALGRSI--GSCIHSIEN 304 (311)
Q Consensus 259 ---------~~d~e----vr~A~~~A~~LL~~hr~~le~LAeaLle~esv--~~C~~~Ie~ 304 (311)
.+|++ +++||.+|++||++|++.+++||++|+++||| +++.++++.
T Consensus 408 ~~~s~~~~~~i~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 468 (499)
T 2dhr_A 408 RQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEG 468 (499)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 23444 45899999999999999999999999999999 667666654
No 4
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=94.45 E-value=0.018 Score=51.87 Aligned_cols=27 Identities=26% Similarity=0.220 Sum_probs=25.2
Q ss_pred HHHHHHHhHHHHHHHhCCCCCceecCc
Q 021521 137 MCVQHEAGHFLTGYLLGVLPKGYEIPS 163 (311)
Q Consensus 137 RIA~HEAGHaLVAyLLg~PV~~yTI~~ 163 (311)
-+..||.||+++|+..|++++++++.|
T Consensus 50 ~v~~HElgH~~~A~~~G~~~~~i~l~p 76 (224)
T 3b4r_A 50 SVVLHELGHSYVAKKYGVKIEKILLLP 76 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCEEECS
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEE
Confidence 478899999999999999999999987
No 5
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=71.25 E-value=1.6 Score=36.19 Aligned_cols=15 Identities=40% Similarity=0.541 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 106 ~~~~~v~~HEiGHaL 120 (160)
T 2jsd_A 106 FNLFTVAAHEFGHAL 120 (160)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhHhhh
Confidence 356789999999986
No 6
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=68.93 E-value=1.9 Score=36.18 Aligned_cols=15 Identities=40% Similarity=0.618 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 113 ~~~~~v~~HEiGHaL 127 (167)
T 2xs4_A 113 IDLITVAAHEIGHLL 127 (167)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhh
Confidence 467789999999986
No 7
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=67.12 E-value=27 Score=28.71 Aligned_cols=66 Identities=6% Similarity=-0.037 Sum_probs=42.1
Q ss_pred hhHHHHHHHH--HHHhCCCchhHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHhh-ccHHHHHHHHHHh
Q 021521 240 YSDINKLDKV--FQWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSRLAEAMALG-RSIGSCIHSIENA 305 (311)
Q Consensus 240 ~~Dl~qat~l--ar~lGms~~~~d~evr~------A~~~A~~LL~~hr~~le~LAeaLle~-esv~~C~~~Ie~~ 305 (311)
.+|+..+..| ++.+|||-++|..-+.. .......+|+++...+++-.+.|.+- +.|...+...++.
T Consensus 43 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~ 117 (142)
T 3gp4_A 43 AEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTH 117 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777765 46689998887665442 34556677777777777666666553 4555555555443
No 8
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=66.60 E-value=2.3 Score=36.05 Aligned_cols=15 Identities=40% Similarity=0.722 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
-....|+.||.||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (173)
T 1hy7_A 111 TNLFLVAAHEIGHSL 125 (173)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHhh
Confidence 356789999999986
No 9
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=66.40 E-value=1.9 Score=36.15 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...||.||.||+|
T Consensus 109 ~~~~~va~HEiGHaL 123 (159)
T 2ovx_A 109 YSLFLVAAHQFGHAL 123 (159)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhh
Confidence 356789999999985
No 10
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=66.11 E-value=13 Score=30.75 Aligned_cols=67 Identities=12% Similarity=0.218 Sum_probs=45.4
Q ss_pred hhHHHHHHHHH--HHhCCCchhHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHhh-ccHHHHHHHHHHhh
Q 021521 240 YSDINKLDKVF--QWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSRLAEAMALG-RSIGSCIHSIENAL 306 (311)
Q Consensus 240 ~~Dl~qat~la--r~lGms~~~~d~evr~------A~~~A~~LL~~hr~~le~LAeaLle~-esv~~C~~~Ie~~~ 306 (311)
.+|+..+..|. +.+|||-++|..-+.. ...+...+|++++..+++-.+.|.+. +.|...+..+++.+
T Consensus 57 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~ 132 (148)
T 3gpv_A 57 EEALKYLEMILCLKNTGMPIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEI 132 (148)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888888764 6699999888776542 34566788888888887777776664 56677766666555
No 11
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=63.69 E-value=20 Score=27.00 Aligned_cols=49 Identities=14% Similarity=0.195 Sum_probs=31.1
Q ss_pred hHHHHHHHH--HHHhCCCchhHHHHHHH-------HHHHHHHHHHHcHHHHHHHHHHH
Q 021521 241 SDINKLDKV--FQWLGYNKSEADSQVKW-------AALNTVLISHHHIQVRSRLAEAM 289 (311)
Q Consensus 241 ~Dl~qat~l--ar~lGms~~~~d~evr~-------A~~~A~~LL~~hr~~le~LAeaL 289 (311)
+|+..+..| ++.+|||-++|..-+.. .......+|++|+..++.=-+.|
T Consensus 1 ~dl~rL~~I~~lr~lGfsL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L 58 (99)
T 1q08_A 1 SDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAEL 58 (99)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 367777776 57799999888765542 22355667776666655444443
No 12
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=63.35 E-value=2.4 Score=35.79 Aligned_cols=14 Identities=36% Similarity=0.491 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
....|+.||.||+|
T Consensus 110 ~~~~v~~HEiGHaL 123 (168)
T 1cge_A 110 NLHRVAAHELGHSL 123 (168)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred chhhhhhhHhHhhh
Confidence 46789999999985
No 13
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=62.43 E-value=2.5 Score=35.50 Aligned_cols=15 Identities=40% Similarity=0.614 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVL 125 (165)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhHHHHhHhhh
Confidence 456889999999985
No 14
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=59.56 E-value=3.8 Score=34.48 Aligned_cols=15 Identities=40% Similarity=0.631 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 110 ~~~~~v~~HE~GHal 124 (163)
T 1i76_A 110 YNLFLVAAHEFGHSL 124 (163)
T ss_dssp CBHHHHHHHHHHHHH
T ss_pred chhhhhhHHHhhhhh
Confidence 346789999999986
No 15
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=53.10 E-value=4.4 Score=36.88 Aligned_cols=15 Identities=40% Similarity=0.700 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhHHHH
Q 021521 134 DHFMCVQHEAGHFLT 148 (311)
Q Consensus 134 er~RIA~HEAGHaLV 148 (311)
....|+.||.||+|=
T Consensus 194 ~l~~va~HEiGHaLG 208 (255)
T 1slm_A 194 NLFLVAAHEIGHSLG 208 (255)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eehhhhHHHHHHHhc
Confidence 467899999999863
No 16
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=52.41 E-value=4.7 Score=33.78 Aligned_cols=15 Identities=40% Similarity=0.682 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 106 ~~~~~~~~HE~GH~l 120 (159)
T 1y93_A 106 TNLFLTAVHEIGHSL 120 (159)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhhh
Confidence 356789999999985
No 17
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=51.73 E-value=5.9 Score=33.73 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 113 ~~~~~~~~HE~gH~l 127 (174)
T 2y6d_A 113 INFLYAATHELGHSL 127 (174)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeehhhHHhHhhh
Confidence 456789999999986
No 18
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=51.04 E-value=6.2 Score=33.14 Aligned_cols=16 Identities=44% Similarity=0.708 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHhHHH
Q 021521 132 EEDHFMCVQHEAGHFL 147 (311)
Q Consensus 132 ~eer~RIA~HEAGHaL 147 (311)
..+...|+.||.||+|
T Consensus 114 g~~~~~~~~he~gh~l 129 (169)
T 1rm8_A 114 GNDLFLVAVHELGHAL 129 (169)
T ss_dssp SEEHHHHHHHHHHHHH
T ss_pred cceeeeehhhhhhhhc
Confidence 3567899999999986
No 19
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=50.82 E-value=5.8 Score=33.55 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
....|+.||.||+|
T Consensus 113 ~~~~~~~HE~gH~l 126 (167)
T 3ayu_A 113 SLFLVAAHAFGHAM 126 (167)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cceeehhhhhHHhc
Confidence 46789999999986
No 20
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.54 E-value=10 Score=29.79 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=17.4
Q ss_pred CChhHHHHHHHHHHhHHHHHH
Q 021521 130 LKEEDHFMCVQHEAGHFLTGY 150 (311)
Q Consensus 130 ls~eer~RIA~HEAGHaLVAy 150 (311)
++++|..-|.-||.||..-.+
T Consensus 78 l~~~El~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 78 MTRDEAEAVLAHEVSHIANGD 98 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHCCC
Confidence 378999999999999986433
No 21
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=47.15 E-value=8.3 Score=38.04 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...||.||.||+|
T Consensus 168 ~~~~~va~HEiGHaL 182 (471)
T 1sat_A 168 DYGRQTFTHEIGHAL 182 (471)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccceeeeeeccccc
Confidence 345689999999997
No 22
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=46.25 E-value=8.7 Score=37.88 Aligned_cols=15 Identities=33% Similarity=0.335 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhHHHH
Q 021521 134 DHFMCVQHEAGHFLT 148 (311)
Q Consensus 134 er~RIA~HEAGHaLV 148 (311)
+...|+.||.||+|=
T Consensus 162 ~~~~va~HEiGHaLG 176 (463)
T 1g9k_A 162 YGRQTLTHEIGHTLG 176 (463)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhc
Confidence 457899999999973
No 23
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=45.18 E-value=9.3 Score=37.86 Aligned_cols=14 Identities=36% Similarity=0.384 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
+...|+.||.||+|
T Consensus 178 ~~~~va~HEIGHaL 191 (479)
T 1kap_P 178 YGRQTLTHEIGHTL 191 (479)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ccceeehhhhhhhh
Confidence 56789999999986
No 24
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=43.69 E-value=60 Score=26.37 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=43.4
Q ss_pred HHHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHc------H-HHHHHHHHHHHhhccHHHHHHHHHHhhc
Q 021521 245 KLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHH------I-QVRSRLAEAMALGRSIGSCIHSIENALS 307 (311)
Q Consensus 245 qat~lar~lGms~~~~d~ev----r~A~~~A~~LL~~h------r-~~le~LAeaLle~esv~~C~~~Ie~~~~ 307 (311)
+..+++|.+|+|+.+||.-. |-..++.+++|+.- + ..++.|.++|. +--+..|...|++.+.
T Consensus 27 ~WK~~aRkLGLse~~Id~Ie~~~~r~l~Eq~yqmLr~W~~~~G~~~Atv~~L~~aLr-~~~l~~~ae~Ie~~l~ 99 (112)
T 1ich_A 27 RWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLR-DMDLLGCLEDIEEALC 99 (112)
T ss_dssp THHHHHHHHTCCHHHHHHHHHHCCSCHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHH-HTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHCcCChHHHHHHHHHHHHHhcCCCCCcHHHHHHHHH-HhccHHHHHHHHHHHh
Confidence 45567788999998887532 23556666777632 2 36899999998 4566778888888763
No 25
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=43.32 E-value=10 Score=37.48 Aligned_cols=15 Identities=40% Similarity=0.399 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...||.||.||+|
T Consensus 180 ~~~~~va~HEiGHaL 194 (479)
T 1k7i_A 180 EYGRQTFTHEIGHAL 194 (479)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHhh
Confidence 344689999999987
No 26
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=42.54 E-value=8 Score=35.46 Aligned_cols=19 Identities=5% Similarity=-0.045 Sum_probs=13.6
Q ss_pred ccCCHHHHHHHHHHHhhHH
Q 021521 208 GEISVKTLNNFSCVILGGL 226 (311)
Q Consensus 208 ~~~s~~~L~r~~~VlLAGr 226 (311)
..+|..+..|+-+++.+-|
T Consensus 239 ~~FT~gQ~~RM~~~~~~~R 257 (262)
T 2cki_A 239 VMFTQGQATRVNACLDGPR 257 (262)
T ss_dssp CBCBHHHHHHHHHHHHTTT
T ss_pred cccCHHHHHHHHHHHHHHH
Confidence 4578888998877776433
No 27
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=41.65 E-value=89 Score=25.42 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHc------HHHHHHHHHHHHh
Q 021521 243 INKLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHH------IQVRSRLAEAMAL 291 (311)
Q Consensus 243 l~qat~lar~lGms~~~~d~ev----r~A~~~A~~LL~~h------r~~le~LAeaLle 291 (311)
+.+..+++|.+|+|+.+||.-. +-..++..++|+.. +.+++.|.++|..
T Consensus 20 ~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~~~G~~aa~~~Li~aLr~ 78 (115)
T 3ezq_A 20 LSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKK 78 (115)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 3567788999999998888542 33668888888854 4588888888876
No 28
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=40.92 E-value=13 Score=31.12 Aligned_cols=14 Identities=43% Similarity=0.650 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
...+|+.||-||.|
T Consensus 76 ~~~~v~aHE~GH~L 89 (132)
T 1c7k_A 76 DSTRVTAHETGHVL 89 (132)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCceEEeeeehhcc
Confidence 35689999999986
No 29
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=39.99 E-value=40 Score=29.53 Aligned_cols=66 Identities=9% Similarity=0.092 Sum_probs=43.0
Q ss_pred hhHHHHHHHH--HHHhCCCchhHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHhh-ccHHHHHHHHHHh
Q 021521 240 YSDINKLDKV--FQWLGYNKSEADSQVKWAALNTVLISHHHIQVRSRLAEAMALG-RSIGSCIHSIENA 305 (311)
Q Consensus 240 ~~Dl~qat~l--ar~lGms~~~~d~evr~A~~~A~~LL~~hr~~le~LAeaLle~-esv~~C~~~Ie~~ 305 (311)
.+|+.++..+ ++.+|||-+++.+-+.........+|++++..+++-.+.|.+. ..|...++.++..
T Consensus 47 ~~~~~~l~~i~~l~~~g~~l~~i~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~ 115 (278)
T 1r8e_A 47 DSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQ 115 (278)
T ss_dssp TGGGGHHHHHHHHHHTTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3677777776 4779999888776543224456777888777776666655553 4566655555544
No 30
>1fad_A Protein (FADD protein); apoptosis, death domain; NMR {Mus musculus} SCOP: a.77.1.2
Probab=38.52 E-value=1.3e+02 Score=22.75 Aligned_cols=61 Identities=13% Similarity=0.032 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCchhHHHHH-H---HHHHHHHHHHHHc------HHHHHHHHHHHHhhccHHHHHHHHHHhh
Q 021521 245 KLDKVFQWLGYNKSEADSQV-K---WAALNTVLISHHH------IQVRSRLAEAMALGRSIGSCIHSIENAL 306 (311)
Q Consensus 245 qat~lar~lGms~~~~d~ev-r---~A~~~A~~LL~~h------r~~le~LAeaLle~esv~~C~~~Ie~~~ 306 (311)
.-.++++.+||+..+|+.-. + --..++.++|+.- ...++.|.++|.+-. ..++...|++.+
T Consensus 27 ~Wk~Lar~Lg~~~~~I~~I~~~~~~d~~eq~~~mL~~W~~~~g~~At~~~L~~AL~~~~-~~~iae~i~~~~ 97 (99)
T 1fad_A 27 DWKRLARELKVSEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTCR-LNLVADLVEEAQ 97 (99)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHHT-CHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHCC-cHHHHHHHHHHH
Confidence 44567788999998877521 1 2456666666643 456788888888754 445555555544
No 31
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=35.64 E-value=12 Score=31.77 Aligned_cols=15 Identities=40% Similarity=0.631 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHhHHH
Q 021521 133 EDHFMCVQHEAGHFL 147 (311)
Q Consensus 133 eer~RIA~HEAGHaL 147 (311)
.+...|+.||.||+|
T Consensus 111 ~~l~~v~~hE~Gh~l 125 (168)
T 830c_A 111 YNLFLVAAHEFGHSL 125 (168)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhcchh
Confidence 456789999999986
No 32
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=35.19 E-value=58 Score=25.09 Aligned_cols=48 Identities=10% Similarity=0.306 Sum_probs=27.2
Q ss_pred hHHHHHHHH--HHHhCCCchhHHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 021521 241 SDINKLDKV--FQWLGYNKSEADSQVKWAALNTVLISHHHIQVRSRLAEA 288 (311)
Q Consensus 241 ~Dl~qat~l--ar~lGms~~~~d~evr~A~~~A~~LL~~hr~~le~LAea 288 (311)
+|+..+..+ ++.+|||.+++..-+...-.....+|+++.+.++.=.+.
T Consensus 44 ~dl~~l~~I~~l~~~G~~l~~I~~~l~~~~~~~~~~l~~~~~~l~~~i~~ 93 (109)
T 1r8d_A 44 ADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQR 93 (109)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 577776665 366899887776554321112345666665555543333
No 33
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=34.76 E-value=1.4e+02 Score=23.93 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=23.4
Q ss_pred hHHHHHHHH--HHHhCCCchhHHHHHHH------HHHHHHHHHHHcHHHHHH
Q 021521 241 SDINKLDKV--FQWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSR 284 (311)
Q Consensus 241 ~Dl~qat~l--ar~lGms~~~~d~evr~------A~~~A~~LL~~hr~~le~ 284 (311)
+|+..+..| ++.+|||.+++..-+.. .......+|+++...+++
T Consensus 42 ~dl~~l~~I~~lr~~G~sl~eI~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 93 (135)
T 1q06_A 42 QHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIER 93 (135)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHH
Confidence 566666654 35678887666554321 123344555555544443
No 34
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=31.69 E-value=28 Score=34.76 Aligned_cols=18 Identities=33% Similarity=0.372 Sum_probs=15.8
Q ss_pred HHHHHHHhHHHHHHHhCC
Q 021521 137 MCVQHEAGHFLTGYLLGV 154 (311)
Q Consensus 137 RIA~HEAGHaLVAyLLg~ 154 (311)
.+..||.||++=.++...
T Consensus 355 ~TL~HE~GHalH~~ls~~ 372 (567)
T 3sks_A 355 DVLTHEAGHAFQVYESRK 372 (567)
T ss_dssp HHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHccHHHHHHHHcc
Confidence 679999999999999863
No 35
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=31.41 E-value=16 Score=31.55 Aligned_cols=14 Identities=43% Similarity=0.726 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHhHH
Q 021521 133 EDHFMCVQHEAGHF 146 (311)
Q Consensus 133 eer~RIA~HEAGHa 146 (311)
.+...|+.||.||+
T Consensus 120 ~~l~~v~~hE~Gh~ 133 (181)
T 3ma2_D 120 NDIFLVAVHELGHA 133 (181)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred ceeeeeehhhcccc
Confidence 46778999999998
No 36
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=31.08 E-value=18 Score=34.21 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHH
Q 021521 134 DHFMCVQHEAGHFLT 148 (311)
Q Consensus 134 er~RIA~HEAGHaLV 148 (311)
+...|+.||.||+|=
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 345899999999984
No 37
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Probab=29.58 E-value=32 Score=33.87 Aligned_cols=22 Identities=27% Similarity=0.197 Sum_probs=16.6
Q ss_pred HHHHHHHhHHHHHHHhCC-CCCc
Q 021521 137 MCVQHEAGHFLTGYLLGV-LPKG 158 (311)
Q Consensus 137 RIA~HEAGHaLVAyLLg~-PV~~ 158 (311)
.+..||.||++=.++... |+.+
T Consensus 352 ~TL~HE~GHa~H~~ls~~~~~~~ 374 (564)
T 3ahn_A 352 DVLTHEAGHAFQVYESRHYEIPE 374 (564)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSGG
T ss_pred hhHHHHhCHHHHHHHhcCCCCcc
Confidence 579999999998887752 4434
No 38
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=29.37 E-value=57 Score=29.27 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=17.2
Q ss_pred hhHHHHHHHH--HHHhCCCchhHHHHH
Q 021521 240 YSDINKLDKV--FQWLGYNKSEADSQV 264 (311)
Q Consensus 240 ~~Dl~qat~l--ar~lGms~~~~d~ev 264 (311)
.+|+..+..| ++.+|||-++|..-+
T Consensus 44 ~~dl~~L~~I~~lr~~G~sL~eIk~~l 70 (249)
T 3qao_A 44 EKDVDKLQQILFFKELDFPLKKIQQIL 70 (249)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHh
Confidence 3577777775 467899887776543
No 39
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=29.36 E-value=49 Score=25.48 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHcH------HHHHHHHHHHHh
Q 021521 244 NKLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHHI------QVRSRLAEAMAL 291 (311)
Q Consensus 244 ~qat~lar~lGms~~~~d~ev----r~A~~~A~~LL~~hr------~~le~LAeaLle 291 (311)
.+..+++|.+|+|+.+||+-. +-..++..++|+.-. .+++.|.++|..
T Consensus 13 ~~wK~~~R~LGlse~~Id~I~~~~~~d~~Eq~~qmL~~W~~~~g~~a~~~~Li~~Lr~ 70 (86)
T 3oq9_A 13 QEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDAYQDLIKGLKK 70 (86)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHTCTTCCTTHHHHHHHHHHHHSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHHHHHHHhCCCChHHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 456778899999998888532 224466777776544 577888888876
No 40
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=27.78 E-value=22 Score=31.07 Aligned_cols=18 Identities=33% Similarity=0.388 Sum_probs=13.8
Q ss_pred HHHHHHHHHhHHHHHHHh
Q 021521 135 HFMCVQHEAGHFLTGYLL 152 (311)
Q Consensus 135 r~RIA~HEAGHaLVAyLL 152 (311)
+.-++.||.||+|=-+-.
T Consensus 87 ~~g~i~HEl~HalGf~HE 104 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHE 104 (201)
T ss_dssp SHHHHHHHHHHHHTBCCG
T ss_pred ccchhHHHHHHHhcchhh
Confidence 457999999999855444
No 41
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=26.63 E-value=24 Score=30.98 Aligned_cols=18 Identities=33% Similarity=0.122 Sum_probs=13.8
Q ss_pred HHHHHHHHHhHHHHHHHh
Q 021521 135 HFMCVQHEAGHFLTGYLL 152 (311)
Q Consensus 135 r~RIA~HEAGHaLVAyLL 152 (311)
...++.||.||+|=-+-.
T Consensus 93 ~~g~i~HEl~HaLGf~HE 110 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYHE 110 (199)
T ss_dssp SHHHHHHHHHHHHTCCCG
T ss_pred ccchHHHHHHHHhcccee
Confidence 357999999999855544
No 42
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P
Probab=26.18 E-value=33 Score=35.01 Aligned_cols=17 Identities=24% Similarity=0.215 Sum_probs=15.0
Q ss_pred HHHHHHHhHHHHHHHhC
Q 021521 137 MCVQHEAGHFLTGYLLG 153 (311)
Q Consensus 137 RIA~HEAGHaLVAyLLg 153 (311)
.+..||.||++=.++..
T Consensus 470 ~TLfHE~GHalH~~ls~ 486 (678)
T 2o3e_A 470 ETYFHEFGHVMHQICAQ 486 (678)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 67999999999988776
No 43
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Probab=26.11 E-value=39 Score=34.44 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=15.5
Q ss_pred HHHHHHHhHHHHHHHhCC
Q 021521 137 MCVQHEAGHFLTGYLLGV 154 (311)
Q Consensus 137 RIA~HEAGHaLVAyLLg~ 154 (311)
.+..||.||++=.++...
T Consensus 454 ~TLfHE~GHalH~~ls~~ 471 (674)
T 2o36_A 454 RTYFHEFGHVMHQLCSQA 471 (674)
T ss_dssp HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 679999999999888764
No 44
>2yqf_A Ankyrin-1; death domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yvi_A
Probab=25.70 E-value=78 Score=24.72 Aligned_cols=46 Identities=9% Similarity=0.034 Sum_probs=30.9
Q ss_pred HHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHcH------HHHHHHHHHHHh
Q 021521 246 LDKVFQWLGYNKSEADSQV----KWAALNTVLISHHHI------QVRSRLAEAMAL 291 (311)
Q Consensus 246 at~lar~lGms~~~~d~ev----r~A~~~A~~LL~~hr------~~le~LAeaLle 291 (311)
-.++++.|||+..+|+.-. +--..++.++|+.-+ ..++.|.++|.+
T Consensus 32 Wk~LAr~Lg~s~~~I~~I~~~~p~~~~eq~~~mL~~W~~~~g~~AT~~~L~~aL~~ 87 (111)
T 2yqf_A 32 WAELARELQFSVEDINRIRVENPNSLLEQSVALLNLWVIREGQNANMENLYTALQS 87 (111)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhCCCchHHHHHHHHHH
Confidence 4567788999998877532 223566777775433 467788888876
No 45
>1s7o_A Hypothetical UPF0122 protein SPY1201/SPYM3_0842/SPS1042/SPYM18_1152; putative DNA binding protein, structural genomics; 2.31A {Streptococcus pyogenes serotype M3} SCOP: a.4.13.3
Probab=25.37 E-value=2.2e+02 Score=22.19 Aligned_cols=29 Identities=7% Similarity=0.043 Sum_probs=19.4
Q ss_pred HHHHHHhCCCchhHHHHHHHHHHHHHHHH
Q 021521 247 DKVFQWLGYNKSEADSQVKWAALNTVLIS 275 (311)
Q Consensus 247 t~lar~lGms~~~~d~evr~A~~~A~~LL 275 (311)
.+++..+|.|...+...+.+|...-+..+
T Consensus 42 ~EIA~~lgiS~~tV~~~l~ra~~kLr~~l 70 (113)
T 1s7o_A 42 AEIADEFGVSRQAVYDNIKRTEKILETYE 70 (113)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHHHHH
Confidence 56777888888777776666555544444
No 46
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=24.85 E-value=27 Score=35.10 Aligned_cols=15 Identities=27% Similarity=0.332 Sum_probs=12.1
Q ss_pred HHHHHHHhHHHHHHH
Q 021521 137 MCVQHEAGHFLTGYL 151 (311)
Q Consensus 137 RIA~HEAGHaLVAyL 151 (311)
.+++||.||++=-..
T Consensus 343 ~tl~HE~GHa~y~~~ 357 (589)
T 1uze_A 343 VVAHHEMGHIQYFMQ 357 (589)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 589999999998433
No 47
>2vz4_A Tipal, HTH-type transcriptional activator TIPA; transcription, resistance, antibiotic; 2.90A {Streptomyces lividans}
Probab=24.62 E-value=71 Score=24.59 Aligned_cols=49 Identities=14% Similarity=0.191 Sum_probs=26.9
Q ss_pred hhHHHHHHHHH--HHhCCCchhHHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 021521 240 YSDINKLDKVF--QWLGYNKSEADSQVKWAALNTVLISHHHIQVRSRLAEA 288 (311)
Q Consensus 240 ~~Dl~qat~la--r~lGms~~~~d~evr~A~~~A~~LL~~hr~~le~LAea 288 (311)
.+|+..+..+. +.+|||.+++..-+...-.....+|+++.+.++.=.+.
T Consensus 42 ~~dl~~l~~I~~lr~~G~sl~~I~~~l~~~~~~~~~~l~~~~~~l~~~i~~ 92 (108)
T 2vz4_A 42 DADLDRLQQILFYRELGFPLDEVAALLDDPAADPRAHLRRQHELLSARIGK 92 (108)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHTC-----CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 46777777653 67899988776554321123445566665555443333
No 48
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=24.57 E-value=22 Score=34.97 Aligned_cols=14 Identities=43% Similarity=0.712 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
....||.||.||+|
T Consensus 375 ~l~~Va~HE~GHaL 388 (425)
T 1l6j_A 375 SLFLVAAHEFGHAL 388 (425)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhc
Confidence 56789999999985
No 49
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=23.98 E-value=48 Score=30.95 Aligned_cols=22 Identities=23% Similarity=0.172 Sum_probs=18.5
Q ss_pred CChhHHHHHHHHHHhHHHHHHH
Q 021521 130 LKEEDHFMCVQHEAGHFLTGYL 151 (311)
Q Consensus 130 ls~eer~RIA~HEAGHaLVAyL 151 (311)
.++..++=++.||.||.+...-
T Consensus 91 ~~~~rqrFTLAHELGHllLh~~ 112 (301)
T 3dte_A 91 VRPERQRFTLAHEISHALLLGD 112 (301)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHC
T ss_pred CChhhHHHHHHHHHHHHHhccc
Confidence 3777888899999999998864
No 50
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A
Probab=23.73 E-value=29 Score=35.22 Aligned_cols=15 Identities=40% Similarity=0.713 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhHHHH
Q 021521 134 DHFMCVQHEAGHFLT 148 (311)
Q Consensus 134 er~RIA~HEAGHaLV 148 (311)
+.-.+++||+||++=
T Consensus 344 ~d~~~~~HE~GHa~Y 358 (598)
T 2x96_A 344 DQLFTVHHELGHIQY 358 (598)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHhHHHHHHHHHHH
Confidence 344679999999997
No 51
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=23.68 E-value=29 Score=31.22 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=21.8
Q ss_pred HHHHHHHHHhHHHHHHHhCC-CCC-ceecCchhhhccc
Q 021521 135 HFMCVQHEAGHFLTGYLLGV-LPK-GYEIPSVEALKQD 170 (311)
Q Consensus 135 r~RIA~HEAGHaLVAyLLg~-PV~-~yTI~~~ealr~G 170 (311)
...++.||-||+|=-+-.-- |=+ .|--+.|+-+..|
T Consensus 120 ~~g~i~HEl~HaLGf~HEhsR~DRD~yV~I~~~nI~~~ 157 (235)
T 3lq0_A 120 YHGTILHALMHAIGFYHEHTRMDRDNYVTINYQNVDPS 157 (235)
T ss_dssp SHHHHHHHHHHHHHBCCGGGSTTGGGTEEECGGGBCTT
T ss_pred ccchHHHHHHHHhccceeeecccccceeEeehhccCcc
Confidence 35899999999987665542 222 2322346655554
No 52
>3ezq_B Protein FADD; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} PDB: 1e3y_A 1e41_A 3oq9_H
Probab=23.48 E-value=2.7e+02 Score=22.35 Aligned_cols=46 Identities=11% Similarity=-0.029 Sum_probs=31.7
Q ss_pred HHHHHHHhCCCchhHHHHH-H---HHHHHHHHHHHHc------HHHHHHHHHHHHh
Q 021521 246 LDKVFQWLGYNKSEADSQV-K---WAALNTVLISHHH------IQVRSRLAEAMAL 291 (311)
Q Consensus 246 at~lar~lGms~~~~d~ev-r---~A~~~A~~LL~~h------r~~le~LAeaLle 291 (311)
-.++++.|||++.+|+.-. + --..++.++|..- ...++.|.++|.+
T Consensus 20 Wk~LAR~LGlse~dId~Ie~~~p~dl~eq~~~mL~~W~~r~G~~ATv~~L~~AL~~ 75 (122)
T 3ezq_B 20 WRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRS 75 (122)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhCCCchHHHHHHHHHH
Confidence 4456788999998877532 1 2456777777643 3467889999876
No 53
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=23.13 E-value=25 Score=34.63 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHH
Q 021521 134 DHFMCVQHEAGHFLT 148 (311)
Q Consensus 134 er~RIA~HEAGHaLV 148 (311)
....||.||.||+|=
T Consensus 365 ~l~~va~HE~GHaLG 379 (421)
T 1eak_A 365 SLFLVAAHQFGHAMG 379 (421)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhccC
Confidence 556899999999863
No 54
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=22.61 E-value=45 Score=33.19 Aligned_cols=23 Identities=30% Similarity=0.509 Sum_probs=19.8
Q ss_pred CChhHHHHHHHHHHhHHHHHHHh
Q 021521 130 LKEEDHFMCVQHEAGHFLTGYLL 152 (311)
Q Consensus 130 ls~eer~RIA~HEAGHaLVAyLL 152 (311)
++++|..-|.-||.||.--.+.+
T Consensus 324 l~~~El~aVlaHElgH~~~~~~~ 346 (482)
T 4aw6_A 324 CKNEEVLAVLGHELGHWKLGHTV 346 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCHHHHHHHHHHHHHHHHcccHH
Confidence 79999999999999998766554
No 55
>2zhg_A Redox-sensitive transcriptional activator SOXR; oxidative stress, MERR family, activator; HET: DNA; 2.80A {Escherichia coli} PDB: 2zhh_A
Probab=22.48 E-value=1.2e+02 Score=25.09 Aligned_cols=48 Identities=10% Similarity=-0.004 Sum_probs=27.6
Q ss_pred hhHHHHHHHH--HHHhCCCchhHHHHHHH-------HHHHHHHHHHHcHHHHHHHHH
Q 021521 240 YSDINKLDKV--FQWLGYNKSEADSQVKW-------AALNTVLISHHHIQVRSRLAE 287 (311)
Q Consensus 240 ~~Dl~qat~l--ar~lGms~~~~d~evr~-------A~~~A~~LL~~hr~~le~LAe 287 (311)
.+|+..+..| ++.+|||.++|..-+.. .......+|++++..++.=.+
T Consensus 51 ~~dl~~l~~I~~lr~~G~sl~eI~~~l~~~~~~~~~~~~~~~~ll~~~~~~l~~qi~ 107 (154)
T 2zhg_A 51 RDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIH 107 (154)
T ss_dssp TTHHHHHHHHHHHHHHTCCHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHhccccCcccHHHHHHHHHHHHHHHHHHHH
Confidence 4688888766 46789998777654321 123344555555554443333
No 56
>2l2l_A Transcriptional repressor P66-alpha; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=22.40 E-value=90 Score=21.38 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHhc
Q 021521 23 YAKRRRQALKRVDRELSRGNFKVALSLVKQLQ 54 (311)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 54 (311)
++..|.+.++++..||+ ++++-|-|+|.|+
T Consensus 2 s~~ere~~i~~LreeLR--~EEaKLvLLKKlr 31 (43)
T 2l2l_A 2 SPEERERMIKQLKEELR--LEEAKLVLLKKLR 31 (43)
T ss_dssp CHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 46789999999999997 5777788888774
No 57
>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=21.54 E-value=1.2e+02 Score=24.09 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=32.7
Q ss_pred HHHHHHHhCCCchhHHHHH-HH---HHHHHHHHHHHc-------HHHHHHHHHHHHhh
Q 021521 246 LDKVFQWLGYNKSEADSQV-KW---AALNTVLISHHH-------IQVRSRLAEAMALG 292 (311)
Q Consensus 246 at~lar~lGms~~~~d~ev-r~---A~~~A~~LL~~h-------r~~le~LAeaLle~ 292 (311)
-..+++.+||+..+|+.-. +. -..++.++|..- ...++.|.++|.+-
T Consensus 27 Wk~LAr~Lg~s~~~I~~I~~~~~~~l~eq~~~mL~~W~~~~g~~~Atv~~L~~aL~~~ 84 (118)
T 2of5_H 27 WPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLLVQALEQS 84 (118)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTSSCSSHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHc
Confidence 4567888999998887532 21 246677777532 46789999999873
No 58
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=21.11 E-value=2e+02 Score=23.71 Aligned_cols=47 Identities=13% Similarity=0.290 Sum_probs=39.2
Q ss_pred HHHHHhhHHHHHHHHhCCccchhhHHHHHHHHHHHhCCCchhHHHHH
Q 021521 218 FSCVILGGLVAEHLVFGHSEGHYSDINKLDKVFQWLGYNKSEADSQV 264 (311)
Q Consensus 218 ~~~VlLAGrAAE~LvfG~atGg~~Dl~qat~lar~lGms~~~~d~ev 264 (311)
....+++|+...+..|-..++...|++-+..+....|.+..++-+++
T Consensus 138 ~A~~l~~gI~~DTg~f~~~~tt~~~~~~aa~L~~~~g~d~~~i~~~l 184 (188)
T 1wpn_A 138 IAGLMLSAIISDSLLFKSPTCTDQDVAAAKELAEIAGVDAEEYGLNM 184 (188)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 45788999999999998877778999999999988898876665554
No 59
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=20.60 E-value=32 Score=33.59 Aligned_cols=14 Identities=36% Similarity=0.491 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhHHH
Q 021521 134 DHFMCVQHEAGHFL 147 (311)
Q Consensus 134 er~RIA~HEAGHaL 147 (311)
....|+.||.||+|
T Consensus 192 ~l~~v~~HE~GH~l 205 (450)
T 1su3_A 192 NLHRVAAHELGHSL 205 (450)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred ehhchhhhHHHHhc
Confidence 45789999999985
No 60
>2gf5_A FADD protein; death domain, death effector domain, apoptosis, death- inducing signaling complex; NMR {Homo sapiens} SCOP: a.77.1.2 a.77.1.4
Probab=20.29 E-value=1.6e+02 Score=25.11 Aligned_cols=48 Identities=10% Similarity=-0.026 Sum_probs=32.7
Q ss_pred HHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHcH------HHHHHHHHHHHhhc
Q 021521 246 LDKVFQWLGYNKSEADSQV----KWAALNTVLISHHHI------QVRSRLAEAMALGR 293 (311)
Q Consensus 246 at~lar~lGms~~~~d~ev----r~A~~~A~~LL~~hr------~~le~LAeaLle~e 293 (311)
...+++.+||+..+|+.-. +--..++.++|+..+ ..++.|.++|..-.
T Consensus 112 Wk~Lar~Lgl~~~~I~~I~~~~~~d~~eq~~~mL~~W~~r~g~~At~~~L~~AL~~~~ 169 (191)
T 2gf5_A 112 WRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQ 169 (191)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHSSSCSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHcC
Confidence 4456788999998877522 123466777776544 45889999998754
No 61
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=20.11 E-value=33 Score=30.73 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=18.3
Q ss_pred CCChhHHHHHHHHHHhHHHHHHH
Q 021521 129 SLKEEDHFMCVQHEAGHFLTGYL 151 (311)
Q Consensus 129 ~ls~eer~RIA~HEAGHaLVAyL 151 (311)
.+.+.+....++||+||.+++.-
T Consensus 260 ~~~~~~~~~~~l~~~g~~~~~eq 282 (293)
T 3t15_A 260 TFEQPKMTIEKLLEYGNMLVQEQ 282 (293)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHH
Confidence 34566777899999999998753
No 62
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=20.06 E-value=1.8e+02 Score=23.78 Aligned_cols=20 Identities=30% Similarity=0.664 Sum_probs=10.7
Q ss_pred hHHHHHHHH--HHHhCCCchhH
Q 021521 241 SDINKLDKV--FQWLGYNKSEA 260 (311)
Q Consensus 241 ~Dl~qat~l--ar~lGms~~~~ 260 (311)
+|+..+..| ++..|||.+++
T Consensus 46 ~dl~~l~~I~~lr~~G~sl~~I 67 (146)
T 3hh0_A 46 DDLYVLQQIQSFKHLGFSLGEI 67 (146)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHH
Confidence 455555544 34566665544
Done!