BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021522
         (311 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P50214|IDH_NOSS1 Isocitrate dehydrogenase [NADP] OS=Nostoc sp. (strain PCC 7120 /
           UTEX 2576) GN=icd PE=3 SV=1
          Length = 473

 Score = 33.5 bits (75), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 17/83 (20%)

Query: 78  VSPPSTSEVNSAANTQPMVSEDSCRPACPLCRGEVTG---WVVADKVRDYLNEK------ 128
           ++PP+T E  +  N +P+V ++   P  P  RG+ TG   W   +KV D    K      
Sbjct: 5   ITPPTTGEKITFKNGEPVVPDN---PIIPFIRGDGTGIDIWPATEKVLDAAVAKAYQGKR 61

Query: 129 -----KRCCEEDQCTFAGTYLEL 146
                K    ++ C   GTY  L
Sbjct: 62  KISWFKVYAGDEACDLYGTYQYL 84


>sp|Q4P0V4|PPID_USTMA Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis (strain
           521 / FGSC 9021) GN=CPR6 PE=3 SV=1
          Length = 398

 Score = 31.6 bits (70), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 14/82 (17%)

Query: 180 IDVLSTIHSEVPR--------GVVLGDYVIE--YG--DDETGDEFEDFPGDEGNWWTSCI 227
           ++ + T+ S+ P+        G + GD V    YG   D+TGD++EDFP D+ +   S +
Sbjct: 163 VESVETVASDRPKEDVKIVDCGELTGDEVSNQTYGIEQDDTGDQYEDFPEDQDDKLESDV 222

Query: 228 --LYQVFDNLRNARNRRRSRVS 247
              Y +   L+N  N + S+ +
Sbjct: 223 SATYHIGLALKNMANTQFSKAN 244


>sp|P36126|SPO14_YEAST Phospholipase D1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
            S288c) GN=SPO14 PE=1 SV=3
          Length = 1683

 Score = 31.2 bits (69), Expect = 9.3,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 161  KIDPARQL-DWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDE 219
            K D   QL +W     +S+++D    I SE+P G    +Y+    D E      D     
Sbjct: 1343 KADATEQLKEWALNSLASKVLDDKEMIKSEIPEG--FSNYLPNEKDLEM--YLTDKTVTN 1398

Query: 220  GNWWTS----CILYQVFDNLRNARNRRRSRVSDTRRGSRRSSYDTSN----------SDE 265
             N W+     C L  +   L   + +R  ++ D RR    S+  T N          S+E
Sbjct: 1399 RNKWSMLKRICYLQYLSHKLDERKTQRLKKIKDMRRHLSSSTESTRNGSNSLPLNEKSNE 1458

Query: 266  GSVTSVD 272
            G  T+VD
Sbjct: 1459 GESTNVD 1465


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.134    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,442,303
Number of Sequences: 539616
Number of extensions: 5459233
Number of successful extensions: 14502
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 14458
Number of HSP's gapped (non-prelim): 72
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)