BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021524
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8C6|BPC4_ARATH Protein BASIC PENTACYSTEINE4 OS=Arabidopsis thaliana GN=BPC4 PE=1
SV=1
Length = 296
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 236/311 (75%), Gaps = 22/311 (7%)
Query: 4 GHHENGRYKMEYYKGTHAQWNMMPQHQMKEPNNALVMNKKIMAILAERDAAIRERNIALT 63
G ++N R+K +Y+KG + WNM+PQHQ+KE +NALVMNKKIM+ILAERDAA+ ERN A++
Sbjct: 5 GQYDNARFKPDYFKGAQSMWNMIPQHQIKEQHNALVMNKKIMSILAERDAAVHERNQAVS 64
Query: 64 EKREALETRDQALEERDKALAERDDALMARDSALAALQYREAAANFSSVGGFQRGGKRMH 123
K+EA+ RD+AL++RDKAL+ERD AL+ RD+A AALQ+ E + NF+ GG
Sbjct: 65 AKKEAVAARDEALQQRDKALSERDKALIERDNAYAALQHHENSLNFALSGG--------- 115
Query: 124 HPTYQSGDVPEALNSGDMHATDAKPITIIPSETKPHQA--KRAKENKIVTKPSVSPRKVK 181
+ D + G+ H + P++ IP E + KR KENK KVK
Sbjct: 116 ----KCVDGDDCFGIGEPHKLEVFPLSTIPPEVTNTKVVNKRKKENK------QGLSKVK 165
Query: 182 KVGEDLNKKVASDGKKIKSEWDSQD-GLNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGW 240
KVGEDLN++V + GKK +++WDSQD GLNLV FDETTMPVP+C+CTG+ QCYKWGNGGW
Sbjct: 166 KVGEDLNRRVPAPGKKSRTDWDSQDVGLNLVTFDETTMPVPMCSCTGSTRQCYKWGNGGW 225
Query: 241 QSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWA 300
QSSCCTTTLS YPLPQMPNKRH+R+GGRKMSG+VF++LLSRL+AEG+DLS P+DLK++WA
Sbjct: 226 QSSCCTTTLSQYPLPQMPNKRHSRMGGRKMSGNVFSRLLSRLSAEGYDLSCPVDLKDYWA 285
Query: 301 KHGTNRYITIK 311
+HGTNRYITIK
Sbjct: 286 RHGTNRYITIK 296
>sp|F4JUI3|BPC5_ARATH Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thaliana GN=BPC5 PE=1
SV=1
Length = 283
Score = 355 bits (910), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 228/311 (73%), Gaps = 35/311 (11%)
Query: 4 GHHENGRYKMEYYKGTHAQWNMMPQHQMKEPNNALVMNKKIMAILAERDAAIRERNIALT 63
G +ENGRYK +YYKGT + N+MP+ KE +NALVMNKKI++ILAERDAA++ERN A+
Sbjct: 5 GQYENGRYKPDYYKGTQSV-NVMPK---KEQHNALVMNKKIISILAERDAAVKERNEAVA 60
Query: 64 EKREALETRDQALEERDKALAERDDALMARDSALAALQYREAAANFSSVGGFQRGGKRMH 123
+EAL +RD+ALE+RDKAL+ERD+A+M +SAL AL+YRE N+ + +RGG
Sbjct: 61 ATKEALASRDEALEQRDKALSERDNAIMETESALNALRYRENNLNYI-LSCAKRGGS--- 116
Query: 124 HPTYQSGDVPEALNSGDMHATDAKPITIIPSE---TKPHQAKRAKENKIVTKPSVSPRKV 180
+ + + H + PI+ IP E T+P KR KE+K +
Sbjct: 117 ----------QRFITEESHLPNPSPISTIPPEAANTRP--TKRKKESK----------QG 154
Query: 181 KKVGEDLNKKVASDGKKIKSEWDSQDGLNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGW 240
KK+GEDLN+ VAS GKK + +WDS D L V FDE TMPVP+CTCTGT QCYKWGNGGW
Sbjct: 155 KKMGEDLNRPVASPGKKSRKDWDSNDVL--VTFDEMTMPVPMCTCTGTARQCYKWGNGGW 212
Query: 241 QSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWA 300
QSSCCTTTLS YPLPQMPNKRH+RVGGRKMSGSVF++LLSRLA EGH+LS P+DLKN+WA
Sbjct: 213 QSSCCTTTLSEYPLPQMPNKRHSRVGGRKMSGSVFSRLLSRLAGEGHELSSPVDLKNYWA 272
Query: 301 KHGTNRYITIK 311
+HGTNRYITIK
Sbjct: 273 RHGTNRYITIK 283
>sp|Q5VSA8|BBRD_ORYSJ Barley B recombinant-like protein D OS=Oryza sativa subsp. japonica
GN=Os06g0130600 PE=2 SV=1
Length = 331
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/338 (49%), Positives = 207/338 (61%), Gaps = 34/338 (10%)
Query: 1 MDD-GHHENGRYKMEYYKGTHAQWNMMPQHQMKEPNNALVMNKKIMAILAERDAAIRERN 59
MD+ GH ENGR + + YKG H QW MMPQ Q + + MN ++A++ +RD AIRER+
Sbjct: 1 MDNLGHRENGRQRPDQYKGLHTQW-MMPQTQ-RHLKDHQSMN--LLALMNDRDNAIRERD 56
Query: 60 IALTEKREALETRDQALEERDKALAERDDALMARDSALAALQYREAAANFSSVG-----G 114
AL EK+ A+ RD A +RD A+AER+ A++ RD+ALAAL+ + G G
Sbjct: 57 HALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELARTNGLNMNNGNGFPQG 116
Query: 115 FQRGGKRMHHPTYQSGDVPEALNSGD--------MHATDAKPITIIPSETKPHQAKRAKE 166
G K +HH S L D MH ++A PI+ P +AKR K+
Sbjct: 117 SLSGSKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPISTAPGSAG--KAKRPKK 174
Query: 167 NKI----VTKPSVSPRKVKKVGEDLNKKVASDG--------KKIKSEWDSQD-GLNLVNF 213
N + +PS RK KK D K V G +K+EW Q+ GLN V F
Sbjct: 175 NSSQASPLKRPSGVLRKTKKPSGDW-KNVGMSGCGDDSAHASVMKNEWKDQNLGLNQVAF 233
Query: 214 DETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGS 273
D++TMP P C+CTG QCYKWGNGGWQSSCCT +S YPLP MPNKRHAR+GGRKMSG
Sbjct: 234 DDSTMPAPACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPVMPNKRHARMGGRKMSGG 293
Query: 274 VFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
FTKLLSRLAAEGHDLS P+DLK+ WAKHGTNRYITI+
Sbjct: 294 AFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR 331
>sp|Q8L999|BPC6_ARATH Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thaliana GN=BPC6 PE=1
SV=1
Length = 342
Score = 283 bits (725), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 215/357 (60%), Gaps = 61/357 (17%)
Query: 1 MDDG-HHENGRYKMEYYKGTHAQWNMMPQHQMKEPNNALVMNKKIMAILAERDAAIRERN 59
MDDG H ENGR+K QW M Q MK+ +M+I+AERDAAI+ERN
Sbjct: 1 MDDGGHRENGRHKA----AVQGQWLMQHQPSMKQ----------VMSIIAERDAAIQERN 46
Query: 60 IALTEKREALETRDQALEERDKALAERDDALMARDSALAALQYRE------AAANFSSVG 113
+A++EK+ A+ RD A +RD A+AER++A+M RDSAL ALQYRE AAN S+
Sbjct: 47 LAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTALQYRENSMVTAPAANMSACP 106
Query: 114 -------GFQRGGKRMHHPTYQSGDVPE----ALNSGDMHATDAKPITIIPSET----KP 158
G + H +Q +P+ A + +M D P + T KP
Sbjct: 107 PGCQISRGVKHLHHPHMHHHHQQHHIPQLTENAYETREMEPNDGLPTSPPAGSTLESAKP 166
Query: 159 HQAKRAKENKIVTKPSVSPR------KVKKVGED-LNK----KVASD------GKKI--- 198
+ KR K T+ + + R KVKK ED LNK K D K I
Sbjct: 167 KRGKRVNP-KATTQTAANKRGPKNQRKVKKESEDDLNKIMFVKTTHDYTDEDSSKHILIG 225
Query: 199 -KSEWDSQD--GLNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLP 255
KS+W SQ+ GLN V +DETTMP PVC+CTG QCYKWGNGGWQSSCCTTTLS YPLP
Sbjct: 226 SKSDWKSQEMVGLNQVVYDETTMPPPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPLP 285
Query: 256 QMPNKRHARVGGRKMSGSVFTKLLSRLAAEG-HDLSVPLDLKNFWAKHGTNRYITIK 311
+PNKRHARVGGRKMSGS F KLLSRLAAEG HDLS P+DLK+ WAKHGTNRYITIK
Sbjct: 286 ALPNKRHARVGGRKMSGSAFNKLLSRLAAEGHHDLSNPVDLKDHWAKHGTNRYITIK 342
>sp|Q8GUC3|BBR_HORVU Protein Barley B recombinant OS=Hordeum vulgare GN=BBR PE=1 SV=1
Length = 350
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 83/104 (79%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N ++FD + +P PVC+CTG P QCY+WG GGWQS+CCTT++S+YPLP +R AR+ G
Sbjct: 247 INGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAG 306
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +LA EG++L+ P+DLK FWAKHGTN+++TI+
Sbjct: 307 RKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 350
>sp|O82286|BPC7_ARATH Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana GN=BPC7 PE=1
SV=1
Length = 226
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 97/155 (62%), Gaps = 19/155 (12%)
Query: 157 KPHQAKRAKENKIVTKPSVSPRKVKKVGEDLNKKVASDGKKIKSEWDSQDGLNLVNFDET 216
KP + KR+ NK PS+ K +K D+N +++ +FD +
Sbjct: 91 KPQRKKRSVSNKSKKTPSIPETKREKKNLDIN-------------------IDISSFDTS 131
Query: 217 TMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGSVFT 276
+P PVC+CTG CYKWG GGWQSSCCT ++S+YPLP + AR+ GRKMS +
Sbjct: 132 GVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPGARLAGRKMSNGAYV 191
Query: 277 KLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
KLL+RLA EG+DLS PLDLKN WA+HGTN+++TIK
Sbjct: 192 KLLARLADEGYDLSHPLDLKNHWARHGTNKFVTIK 226
>sp|P0DH89|BBRB_ORYSJ Barley B recombinant-like protein B OS=Oryza sativa subsp. japonica
GN=Os10g0115200 PE=2 SV=1
Length = 341
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 82/104 (78%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N ++ D + +P P+C+CTG P QCY+WG GGWQS+CCTTT+S+YPLP +R AR+ G
Sbjct: 238 INGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAG 297
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +LA EG++L+ P+DLK FWAKHGTN+++TI+
Sbjct: 298 RKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 341
>sp|P0DH88|BBRA_ORYSJ Barley B recombinant-like protein A OS=Oryza sativa subsp. japonica
GN=Os10g0114500 PE=2 SV=1
Length = 341
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 82/104 (78%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N ++ D + +P P+C+CTG P QCY+WG GGWQS+CCTTT+S+YPLP +R AR+ G
Sbjct: 238 INGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAG 297
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +LA EG++L+ P+DLK FWAKHGTN+++TI+
Sbjct: 298 RKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 341
>sp|Q9SKD0|BPC1_ARATH Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thaliana GN=BPC1 PE=1
SV=1
Length = 283
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 135 ALNSGDMHATDAKPITIIPSETKPHQAKRAKENKIVTKPSVSP----RKVKKVGEDLNKK 190
LNS P P+ + K+ K + P+V RK K+ + N
Sbjct: 106 VLNSSRFEENPIPP----PAPCEEQTGKKRKMRGSIATPTVPKAKKMRKPKEERDVTNNN 161
Query: 191 VASDGKKIKSEWDSQD-GLNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTL 249
V +++K S D +N V+ D + +PVPVCTCTGTP QCY+WG GGWQS+CCTT +
Sbjct: 162 VQQQQQRVKPVKKSVDLVINGVSMDISGLPVPVCTCTGTPQQCYRWGCGGWQSACCTTNI 221
Query: 250 SSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYIT 309
S YPLP +R AR+ GRKMS F K+L +L+ EG+ +DLK+ WA+HGTN+++T
Sbjct: 222 SVYPLPMSTKRRGARISGRKMSQGAFKKVLEKLSTEGYSFGNAIDLKSHWARHGTNKFVT 281
Query: 310 IK 311
I+
Sbjct: 282 IR 283
>sp|Q9C9X6|BPC3_ARATH Protein BASIC PENTACYSTEINE3 OS=Arabidopsis thaliana GN=BPC3 PE=1
SV=1
Length = 269
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 79/104 (75%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N V+ D +PVPVC+CTG P QCY+WG GGWQS+CCTT +S YPLP +R AR+ G
Sbjct: 166 INGVSMDIGGLPVPVCSCTGMPQQCYRWGCGGWQSACCTTNVSMYPLPVNTKRRGARIAG 225
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +L+++G D S P+DLK+ WAKHGTN+++TI+
Sbjct: 226 RKMSQGAFRKVLEKLSSDGFDFSNPIDLKSHWAKHGTNKFVTIR 269
>sp|Q9LDE2|BPC2_ARATH Protein BASIC PENTACYSTEINE2 OS=Arabidopsis thaliana GN=BPC2 PE=1
SV=1
Length = 279
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 79/104 (75%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N V+ D + +PVP+CTCTG P QCY+WG GGWQS+CCTT +S +PLP +R AR+ G
Sbjct: 176 INGVSMDISGLPVPICTCTGAPQQCYRWGCGGWQSACCTTNISMHPLPMSTKRRGARISG 235
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +LA++G + P+DLK+ WA+HGTN+++TI+
Sbjct: 236 RKMSQGAFKKVLEKLASDGFNFGNPIDLKSHWARHGTNKFVTIR 279
>sp|Q7XH85|BBRC_ORYSJ Barley B recombinant-like protein C OS=Oryza sativa subsp. japonica
GN=Os10g0115500 PE=2 SV=2
Length = 290
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 80/104 (76%)
Query: 208 LNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGG 267
+N ++ D + +P +C+CTG P Q Y+WG GGWQS+CCTTT+S+YPLP R AR+ G
Sbjct: 187 INGIDLDLSRIPTRICSCTGAPQQRYRWGAGGWQSACCTTTVSTYPLPMSMKPRGARIAG 246
Query: 268 RKMSGSVFTKLLSRLAAEGHDLSVPLDLKNFWAKHGTNRYITIK 311
RKMS F K+L +LA+EG++L+ P+DLK FWAKHGTN+++TI+
Sbjct: 247 RKMSHGAFKKVLEKLASEGYNLNNPIDLKTFWAKHGTNKFVTIR 290
>sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6
Length = 2803
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARDSAL 97
L ++D A+ ++ L EK +ALE +D+ EE+DKAL ++D AL +D AL
Sbjct: 1422 LEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKAL 1471
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARDSAL 97
L ++D A+ +++ AL K + LE +D+ALE++DK E+D AL +D+AL
Sbjct: 1415 LEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTAL 1464
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARDSAL 97
L E+D A+ +++ EK +ALE +D ALE++DKAL +D L +D L
Sbjct: 1436 LEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVL 1485
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 30 QMKEPNNALVMNKKIMAILAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDA 89
++ EP + + K L ++ A+++++ AL +K LE +D ALE++DKAL +D
Sbjct: 1378 EVVEPKDTAIYQKD--EALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKD 1435
Query: 90 LMARDSAL 97
L +D AL
Sbjct: 1436 LEEKDKAL 1443
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 28 QHQMKEPNNALVMNK-KIMA---ILAERDAAIRERNIALTEKREALETRDQALEERDKAL 83
Q + EP + ++ K K + ++ +D AI +++ AL K EA++ +D+ALE++ + L
Sbjct: 1356 QKKEPEPKDEVLQQKDKTLEHKEVVEPKDTAIYQKDEALHVKNEAVKQQDKALEQKGRDL 1415
Query: 84 AERDDALMARDSAL 97
++D AL +D AL
Sbjct: 1416 EQKDTALEQKDKAL 1429
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARDSAL 97
L ++ + +++ AL +K +ALE +D+ LEE+DKAL ++D +D AL
Sbjct: 1408 LEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKAL 1457
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARD 94
+ ++D A+ ++ L +K ALE +D+ALE +DK L E+D AL +D
Sbjct: 1401 VKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKD 1447
>sp|Q920R4|GASP1_RAT G-protein coupled receptor-associated sorting protein 1 OS=Rattus
norvegicus GN=Gprasp1 PE=1 SV=1
Length = 1346
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 116 QRGGKRMHHPTYQSGDVPEALNSGDMHATDAKPITIIPSETKPHQAKRAKENKIVTKPSV 175
Q G R+ P + + L SGD T++K +T+ SE+ P K + IV S
Sbjct: 883 QTGVNRVSKPKDEGEGIESWLWSGDKATTESKTVTV--SESSPENGKES----IVKFGSR 936
Query: 176 SPRKVKKVGEDLNKKVASDGKKIKSEWDSQDGLNLVNFDETTM---PVPVCTCTGTPH 230
+ +V +NK + D K +E +S G DE + PVPVC P
Sbjct: 937 AKDEV------INKTGSGDNCKFSTEAESIVGPWFWEGDEASFESNPVPVCKAACEPE 988
>sp|Q05070|Y4393_NOSS1 Uncharacterized protein alr4393 OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=alr4393 PE=4 SV=2
Length = 496
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 57 ERNIALTEKREALETRD-------QALEERDKALAERDDALMARDSALAAL 100
ER E ++A+E RD QA+E+RD+ LA R AL RD ++ L
Sbjct: 189 ERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQL 239
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 48 LAERDAAIRERNIALTEKREALETRDQALEERDKAL-------AERDDALMARDSALAAL 100
LA R AI +R+ L +++AL+ RDQ + + DK + A+R++ + R+S L L
Sbjct: 208 LANRQQAIEQRDRELANRQQALQQRDQKISQLDKIIQNRNLEIAQREEVIAKRESRLKEL 267
Query: 101 Q 101
+
Sbjct: 268 E 268
>sp|Q9QYR6|MAP1A_MOUSE Microtubule-associated protein 1A OS=Mus musculus GN=Map1a PE=1 SV=2
Length = 2776
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 48 LAERDAAIRERNIALTEKREA-----------LETRDQALEERDKALAERDDALMARDSA 96
LAE+D A+ +R AL + + LE +D+ LE RDK E+D L+ D A
Sbjct: 1427 LAEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQKDEHLELRDKTPEEKDKVLVLEDRA 1486
>sp|Q4FRS8|SYM_PSYA2 Methionine--tRNA ligase OS=Psychrobacter arcticus (strain DSM 17307
/ 273-4) GN=metG PE=3 SV=1
Length = 700
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 75 ALEERDKALAERDDALMARDSALAALQYREAAANFSSVGGFQRGGKRMHHP---TYQSGD 131
+L + D A +DD ++A+++A AA A++ + F + ++ H +Y G
Sbjct: 559 SLTQVDAPTASQDDKMVAKNTAPAATPSSTEQADYIGIEDFAKVEMKVAHVIACSYVEG- 617
Query: 132 VPEALNSGDMHATDAKPITIIPSETKPHQAKRAKENKIVTKPSVSPRKVK 181
+ L + +A+P + K ++ ++ + K++ +++PRK+K
Sbjct: 618 -ADKLLQFTLDVGEAQPRNVFSGIRKFYEPEQLLDKKVICVTNLAPRKMK 666
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,671,397
Number of Sequences: 539616
Number of extensions: 4994556
Number of successful extensions: 12812
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 12635
Number of HSP's gapped (non-prelim): 173
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)