Query 021524
Match_columns 311
No_of_seqs 101 out of 114
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 05:23:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021524.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021524hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sgla_ d.124.1.1 (A:) Trichom 39.8 6.6 0.00048 31.4 2.3 10 295-304 95-104 (206)
2 d1iyba_ d.124.1.1 (A:) RNase N 33.5 9.7 0.00071 30.3 2.3 29 276-304 70-103 (208)
3 d1s4va_ d.3.1.1 (A:) Vignain ( 23.2 14 0.001 28.2 1.4 26 234-259 188-223 (224)
4 d1ucda_ d.124.1.1 (A:) Ribonuc 21.9 21 0.0016 27.9 2.3 27 278-304 61-90 (190)
5 d1iqqa_ d.124.1.1 (A:) S3-RNas 20.7 26 0.0019 27.6 2.6 27 278-304 60-90 (200)
6 g8pch.1 d.3.1.1 (P:,A:) Cathep 20.5 13 0.00092 28.7 0.6 24 234-257 199-228 (228)
7 d1v6ga1 g.39.1.3 (A:1-41) Acti 17.1 17 0.0012 23.9 0.5 14 296-309 8-26 (41)
8 d1x6aa1 g.39.1.3 (A:8-41) Lim 15.5 11 0.00078 24.1 -0.8 9 296-304 1-9 (34)
9 d1wgra_ d.15.1.5 (A:) Growth f 15.3 15 0.0011 26.4 -0.1 22 288-309 68-89 (100)
10 d2fnaa1 a.4.5.11 (A:284-356) H 15.2 48 0.0035 23.6 2.7 22 266-287 32-53 (73)
No 1
>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]}
Probab=39.75 E-value=6.6 Score=31.41 Aligned_cols=10 Identities=40% Similarity=0.624 Sum_probs=8.1
Q ss_pred chhHhhhhCC
Q 021524 295 LKNFWAKHGT 304 (311)
Q Consensus 295 lk~~wakhgt 304 (311)
.+.-|.||||
T Consensus 95 w~hEW~KHGT 104 (206)
T d1sgla_ 95 WGQQYEKHGT 104 (206)
T ss_dssp HHHHHHHTGG
T ss_pred HHHHHHhccc
Confidence 4567999998
No 2
>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]}
Probab=33.53 E-value=9.7 Score=30.34 Aligned_cols=29 Identities=34% Similarity=0.604 Sum_probs=18.6
Q ss_pred HHHHHHHhhccCCCCCc----ccch-hHhhhhCC
Q 021524 276 TKLLSRLAAEGHDLSVP----LDLK-NFWAKHGT 304 (311)
Q Consensus 276 ~kll~rla~eg~~~s~p----~dlk-~~wakhgt 304 (311)
..||..|...=-+|-.+ .+|= .-|.||||
T Consensus 70 ~~l~~~l~~~Wp~l~~~~~~~~~~w~hEW~KHGt 103 (208)
T d1iyba_ 70 SDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGT 103 (208)
T ss_dssp GGGHHHHHHHSCCCCSSCCCSHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHhhcccCccHHHHHHhccccee
Confidence 45777777655555333 3454 44999998
No 3
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]}
Probab=23.19 E-value=14 Score=28.17 Aligned_cols=26 Identities=31% Similarity=0.818 Sum_probs=19.3
Q ss_pred ccCCCcc----------cccccccccccccCCCCCC
Q 021524 234 KWGNGGW----------QSSCCTTTLSSYPLPQMPN 259 (311)
Q Consensus 234 ~wg~ggw----------qs~cctt~~s~yplp~~~~ 259 (311)
.||.+|+ ...|=-.+...||+|-+|+
T Consensus 188 ~WG~~Gy~~i~~g~~~~~n~CgI~~~~~yp~~~~~~ 223 (224)
T d1s4va_ 188 EWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSN 223 (224)
T ss_dssp TSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSC
T ss_pred ccccCceEEEECCCCCCCCcCCccceeeeeeccCCC
Confidence 6899997 2334355678999999886
No 4
>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]}
Probab=21.87 E-value=21 Score=27.88 Aligned_cols=27 Identities=30% Similarity=0.412 Sum_probs=15.4
Q ss_pred HHHHHhhccCCCCC--cccc-hhHhhhhCC
Q 021524 278 LLSRLAAEGHDLSV--PLDL-KNFWAKHGT 304 (311)
Q Consensus 278 ll~rla~eg~~~s~--p~dl-k~~wakhgt 304 (311)
|+..|...=-||.. ..+| +.-|.||||
T Consensus 61 l~~~L~~~wp~l~~~~~~~~w~hEW~KHGt 90 (190)
T d1ucda_ 61 LQSQLNTLWPNVLRANNQQFWSHEWTKHGT 90 (190)
T ss_dssp GHHHHHHHSCCSSSSCHHHHHHHHHHHTGG
T ss_pred HHHHHHHHhhhhccccChHHHHHHHHhCcc
Confidence 55566543334432 2345 455999998
No 5
>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]}
Probab=20.72 E-value=26 Score=27.63 Aligned_cols=27 Identities=22% Similarity=0.251 Sum_probs=16.6
Q ss_pred HHHHHhhccCCCCCcc---cc-hhHhhhhCC
Q 021524 278 LLSRLAAEGHDLSVPL---DL-KNFWAKHGT 304 (311)
Q Consensus 278 ll~rla~eg~~~s~p~---dl-k~~wakhgt 304 (311)
|+.+|-..=-+|..+- +| +.-|.||||
T Consensus 60 l~~~l~~~Wp~~~~~~~~~~fw~hEW~KHGT 90 (200)
T d1iqqa_ 60 LEHQLEIIWPNVFDRTKNNLFWDKEWMKHGS 90 (200)
T ss_dssp HHHHHHHHSCCSSCGGGHHHHHHHHHHHTGG
T ss_pred hHHHHHHHhHhhccCCCcchhhHHHHhhCcc
Confidence 5556655544554333 23 677999998
No 6
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]}
Probab=20.50 E-value=13 Score=28.66 Aligned_cols=24 Identities=33% Similarity=0.960 Sum_probs=18.5
Q ss_pred ccCCCcc------cccccccccccccCCCC
Q 021524 234 KWGNGGW------QSSCCTTTLSSYPLPQM 257 (311)
Q Consensus 234 ~wg~ggw------qs~cctt~~s~yplp~~ 257 (311)
.||.+|+ .-.|.-.+-..||+|+.
T Consensus 199 ~WG~~Gy~~i~~g~n~cgi~~~~~~p~~~~ 228 (228)
T g8pch.1 199 QWGMNGYFLIERGKNMCGLAACASYPIPLV 228 (228)
T ss_dssp TSTBTTEEEEECSSCGGGTTTSCEEEEECC
T ss_pred CcccCCEEEEEcCCCcccCcccceeccccC
Confidence 5888886 24588788889999984
No 7
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.13 E-value=17 Score=23.91 Aligned_cols=14 Identities=21% Similarity=0.463 Sum_probs=11.0
Q ss_pred hhHhhhhCC-----cceee
Q 021524 296 KNFWAKHGT-----NRYIT 309 (311)
Q Consensus 296 k~~wakhgt-----nr~it 309 (311)
+|||++.|| +.|||
T Consensus 8 ~DYq~~fG~~C~~C~~~It 26 (41)
T d1v6ga1 8 LDYQRLYGTRCFSCDQFIE 26 (41)
T ss_dssp SCGGGSCCCBCTTTCCBCC
T ss_pred ccHHHHhCcccccccCEee
Confidence 579999987 66765
No 8
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.51 E-value=11 Score=24.10 Aligned_cols=9 Identities=44% Similarity=1.287 Sum_probs=7.1
Q ss_pred hhHhhhhCC
Q 021524 296 KNFWAKHGT 304 (311)
Q Consensus 296 k~~wakhgt 304 (311)
|+||+|-|-
T Consensus 1 kdYw~kfge 9 (34)
T d1x6aa1 1 KDYWGKFGE 9 (34)
T ss_dssp CCSSCCSSC
T ss_pred CcHHHHHHH
Confidence 689999763
No 9
>d1wgra_ d.15.1.5 (A:) Growth factor receptor-bound protein 7, GRB-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.34 E-value=15 Score=26.40 Aligned_cols=22 Identities=18% Similarity=0.531 Sum_probs=18.8
Q ss_pred CCCCcccchhHhhhhCCcceee
Q 021524 288 DLSVPLDLKNFWAKHGTNRYIT 309 (311)
Q Consensus 288 ~~s~p~dlk~~wakhgtnr~it 309 (311)
|--.|+|+...|.++.+||||-
T Consensus 68 d~E~vl~v~~~W~~~~~~r~v~ 89 (100)
T d1wgra_ 68 DHESVVEVQAAWPVGGDSRFVF 89 (100)
T ss_dssp SSSCHHHHHTTSCSSSCCEEEE
T ss_pred chHhHHHHHHcCCCCCCCEEEE
Confidence 4456999999999999999984
No 10
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=15.21 E-value=48 Score=23.59 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=18.9
Q ss_pred cccccchHHHHHHHHHHhhccC
Q 021524 266 GGRKMSGSVFTKLLSRLAAEGH 287 (311)
Q Consensus 266 ~grkms~~af~kll~rla~eg~ 287 (311)
-||..+.+.|+.||..|..-|+
T Consensus 32 ~G~~I~d~~ls~lL~nL~k~~~ 53 (73)
T d2fnaa1 32 EGIEISDSEIYNYLTQLTKHSW 53 (73)
T ss_dssp HCSCCCHHHHHHHHHHHHHTTS
T ss_pred cCCCCChHHHHHHHHHHHHcCc
Confidence 4889999999999999986653
Done!