Your job contains 1 sequence.
>021525
MGDLTESLTPSTTTTTPTSTTPYSRPLPVREDCWSEEATSTLVDAWGRRYLELNRGNLRQ
KDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKIEKARVVSSNGTLTSSWPFFE
RMDTLIGNNVKPSSNFSPKLSQSQSPPVAVPLAYRKSVSVNNSNINNINNNNNSNSLALA
PIPTATAVALPQKRGYNSEGFYRNYSAVAAAAAAAESEDEEAEEEAEEEENDNVNEENSG
VKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERNKR
TKRSGSNDMYS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021525
(311 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076401 - symbol:AT3G58630 species:3702 "Arabi... 349 1.1e-53 3
TAIR|locus:2169722 - symbol:AT5G05550 species:3702 "Arabi... 325 2.3e-46 2
TAIR|locus:2074658 - symbol:AT3G11100 species:3702 "Arabi... 323 9.7e-46 2
TAIR|locus:2087472 - symbol:ASIL2 "Arabidopsis 6B-interac... 331 8.6e-45 2
TAIR|locus:2014445 - symbol:ASIL1 "6B-interacting protein... 285 2.2e-38 2
TAIR|locus:2091757 - symbol:AT3G24490 species:3702 "Arabi... 187 2.5e-26 2
TAIR|locus:2096134 - symbol:AT3G54390 species:3702 "Arabi... 199 1.1e-20 2
TAIR|locus:2100108 - symbol:AT3G10030 species:3702 "Arabi... 242 1.1e-19 1
TAIR|locus:2042401 - symbol:AT2G44730 species:3702 "Arabi... 177 3.6e-18 2
TAIR|locus:2087288 - symbol:AT3G24860 species:3702 "Arabi... 141 2.5e-10 2
FB|FBgn0039350 - symbol:jigr1 "jing interacting gene regu... 110 0.00051 2
>TAIR|locus:2076401 [details] [associations]
symbol:AT3G58630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700
EMBL:BT005520 EMBL:AK118084 IPI:IPI00533830 RefSeq:NP_191422.2
UniGene:At.34710 ProteinModelPortal:Q8GXR6 IntAct:Q8GXR6
PaxDb:Q8GXR6 PRIDE:Q8GXR6 EnsemblPlants:AT3G58630.1 GeneID:825032
KEGG:ath:AT3G58630 TAIR:At3g58630 eggNOG:NOG326733
HOGENOM:HOG000238159 InParanoid:Q8GXR6 OMA:AKELECH PhylomeDB:Q8GXR6
ProtClustDB:CLSN2714024 ArrayExpress:Q8GXR6 Genevestigator:Q8GXR6
Uniprot:Q8GXR6
Length = 321
Score = 349 (127.9 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 69/115 (60%), Positives = 82/115 (71%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALH--------AHSKKTH 81
REDCWSEEAT TL+ AWG RY++L+RGNLRQK WQ+VA+AVN H A + +
Sbjct: 22 REDCWSEEATFTLIQAWGNRYVDLSRGNLRQKHWQEVANAVNDRHYNTGRNVSAAKSQPY 81
Query: 82 RTDVQCKNRIDTIKKKYKIEKARVVSSN-GTLTSSWPFFERMDTLIGNNVKPSSN 135
RTDVQCKNRIDT+KKKYK+EKARV SN G S WPFF +D L+ + SSN
Sbjct: 82 RTDVQCKNRIDTLKKKYKVEKARVSESNPGAYISPWPFFSALDDLLRESFPTSSN 136
Score = 199 (75.1 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 40/67 (59%), Positives = 54/67 (80%)
Query: 240 GVKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERNK 299
G K +A AIER G++YERVE +K ++MVELEKQRM+FA +LE R+++FTEMQV+L + +
Sbjct: 235 GYKEVADAIERLGQIYERVEEKKRKEMVELEKQRMRFAKELECHRMQLFTEMQVRLHKLR 294
Query: 300 RTKRSGS 306
RT SGS
Sbjct: 295 RT--SGS 299
Score = 36 (17.7 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 177 LALAPIPTATAVALPQK 193
+++ P+P A A+P++
Sbjct: 152 MSINPVPVAPRSAIPRR 168
>TAIR|locus:2169722 [details] [associations]
symbol:AT5G05550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:CP002688 GO:GO:0003700 IPI:IPI00527588
RefSeq:NP_850774.1 UniGene:At.8721 ProteinModelPortal:F4K0Q7
SMR:F4K0Q7 PRIDE:F4K0Q7 EnsemblPlants:AT5G05550.2 GeneID:830438
KEGG:ath:AT5G05550 OMA:MYERVES Uniprot:F4K0Q7
Length = 249
Score = 325 (119.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 62/105 (59%), Positives = 80/105 (76%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKN 89
RED WSEEAT+TLV+AWG RY++LN GNLRQ DW+DVADAVN+ H + + +TD+QCKN
Sbjct: 20 REDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRK-KTDLQCKN 78
Query: 90 RIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVKPSS 134
R+DT+KKKYK EKA++ S +W F+ R+D LIG VK S+
Sbjct: 79 RVDTLKKKYKTEKAKLSPS------TWRFYNRLDVLIGPVVKKSA 117
Score = 178 (67.7 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 32/69 (46%), Positives = 52/69 (75%)
Query: 239 SGVKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERN 298
S + LA AI +FGEVYER+E +K + M+ELEKQRM+ ++E++R+ M EMQ+++E++
Sbjct: 174 STCRELATAILKFGEVYERIEGKKQQMMIELEKQRMEVTKEVELKRMNMLMEMQLEIEKS 233
Query: 299 KRTKRSGSN 307
K KR+ ++
Sbjct: 234 KHRKRASAS 242
>TAIR|locus:2074658 [details] [associations]
symbol:AT3G11100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006301 "postreplication repair" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] GO:GO:0005634
EMBL:CP002686 GO:GO:0003700 EMBL:AY064137 IPI:IPI00525490
RefSeq:NP_566386.1 UniGene:At.27074 ProteinModelPortal:Q8VZI9
IntAct:Q8VZI9 STRING:Q8VZI9 PRIDE:Q8VZI9 EnsemblPlants:AT3G11100.1
GeneID:820281 KEGG:ath:AT3G11100 TAIR:At3g11100 InParanoid:Q8VZI9
OMA:METTPET PhylomeDB:Q8VZI9 ProtClustDB:CLSN2688256
Genevestigator:Q8VZI9 Uniprot:Q8VZI9
Length = 249
Score = 323 (118.8 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 63/105 (60%), Positives = 81/105 (77%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKN 89
RED WSE+AT+TL++AWG RY+ LNRGNLRQ DW++VADAVN+ H + + +TDVQCKN
Sbjct: 18 REDWWSEDATATLIEAWGDRYVNLNRGNLRQNDWKEVADAVNSSHGNGRP--KTDVQCKN 75
Query: 90 RIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVKPSS 134
RIDT+KKKYK EKA+ +S+ W FF+R+D LIG +K SS
Sbjct: 76 RIDTLKKKYKTEKAKPLSN-------WCFFDRLDFLIGPVMKKSS 113
Score = 174 (66.3 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 239 SGVKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERN 298
S + LA++I + GE +ER+E +K + M+ELEKQRM+ A +LE+QR+ M EMQ++LE++
Sbjct: 177 SAFRELARSILKLGEAFERIEGKKQQMMIELEKQRMEVAKELELQRMNMLMEMQLELEKS 236
Query: 299 KRTKRSGSN 307
K KR ++
Sbjct: 237 KLGKRRAAS 245
>TAIR|locus:2087472 [details] [associations]
symbol:ASIL2 "Arabidopsis 6B-interacting protein 1-like
2" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010431 "seed maturation" evidence=IMP]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0009793 GO:GO:0010431 EMBL:AP000600
HOGENOM:HOG000238159 EMBL:AY072187 EMBL:AY113853 IPI:IPI00521641
RefSeq:NP_188034.1 UniGene:At.39278 ProteinModelPortal:Q9LJG8
IntAct:Q9LJG8 PaxDb:Q9LJG8 PRIDE:Q9LJG8 EnsemblPlants:AT3G14180.1
GeneID:820635 KEGG:ath:AT3G14180 TAIR:At3g14180 eggNOG:NOG282852
InParanoid:Q9LJG8 OMA:EQTENAK PhylomeDB:Q9LJG8
ProtClustDB:CLSN2915563 ArrayExpress:Q9LJG8 Genevestigator:Q9LJG8
Uniprot:Q9LJG8
Length = 443
Score = 331 (121.6 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 64/129 (49%), Positives = 88/129 (68%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKN 89
REDCWSE AT+ L+DAWG RYLEL+RGNL+QK W++VA+ V++ + K +TD+QCKN
Sbjct: 80 REDCWSEAATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSSREDYGK-IPKTDIQCKN 138
Query: 90 RIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVK-PS--SNFSPKLSQSQSP 146
RIDT+KKKYK EK R+ + G S W FF+++D LIG+ K P+ S S +
Sbjct: 139 RIDTVKKKYKQEKVRIANGGGR--SRWVFFDKLDRLIGSTAKIPTATSGVSGPVGGLHKI 196
Query: 147 PVAVPLAYR 155
P+ +P+ R
Sbjct: 197 PMGIPMGSR 205
Score = 157 (60.3 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 242 KRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERNKRT 301
+ L +AI RFGE YE+ E KL+Q+VE+EK+RM+F +LE+QR++ F + Q+++ + K+
Sbjct: 351 RELTRAIMRFGEAYEQTENAKLQQVVEMEKERMKFLKELELQRMQFFVKTQLEISQLKQQ 410
Query: 302 --KRSG--SND 308
+R G SND
Sbjct: 411 HGRRMGNTSND 421
>TAIR|locus:2014445 [details] [associations]
symbol:ASIL1 "6B-interacting protein 1-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0009733 "response to
auxin stimulus" evidence=IEP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IPI] [GO:0048831 "regulation of shoot system
development" evidence=IMP] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009733
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0009793
GO:GO:0010431 GO:GO:0010029 GO:GO:0048831 EMBL:AC006577
HOGENOM:HOG000238159 EMBL:AF360325 EMBL:AY056333 EMBL:AY084772
IPI:IPI00537242 PIR:C96581 RefSeq:NP_564648.1 UniGene:At.19741
ProteinModelPortal:Q9SYG2 SMR:Q9SYG2 IntAct:Q9SYG2 STRING:Q9SYG2
PaxDb:Q9SYG2 PRIDE:Q9SYG2 EnsemblPlants:AT1G54060.1 GeneID:841844
KEGG:ath:AT1G54060 TAIR:At1g54060 eggNOG:NOG296618
InParanoid:Q9SYG2 OMA:FTEAYEK PhylomeDB:Q9SYG2
ProtClustDB:CLSN2917270 ArrayExpress:Q9SYG2 Genevestigator:Q9SYG2
Uniprot:Q9SYG2
Length = 383
Score = 285 (105.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 55/112 (49%), Positives = 77/112 (68%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKN 89
R+DCWSEEAT L++AWG R+ E +G L+Q+ W++VA+ VN + K +TD+QCKN
Sbjct: 90 RDDCWSEEATKVLIEAWGDRFSEPGKGTLKQQHWKEVAEIVNK--SRQCKYPKTDIQCKN 147
Query: 90 RIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVK--PSSNFSPK 139
RIDT+KKKYK EKA++ S +G S W FF+++++LIG SS S K
Sbjct: 148 RIDTVKKKYKQEKAKIASGDGP--SKWVFFKKLESLIGGTTTFIASSKASEK 197
Score = 142 (55.0 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 239 SGVKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERN 298
SGV +A+AI F E YE+ E KL+ M ELEK+RM+FA ++E+QR++ F + Q+++ +N
Sbjct: 292 SGVGDVARAILGFTEAYEKAETAKLKLMAELEKERMKFAKEMELQRMQ-FLKTQLEITQN 350
Query: 299 KRTKRSGS 306
+ + S
Sbjct: 351 NQEEEERS 358
Score = 40 (19.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 110 GTLTSSWPFFERMDTLIGNNVKPSSNFSPKLSQSQSPPVAV--PLAY 154
G+ + W F +R + + P SP+ S PP+ PL++
Sbjct: 230 GSDSMRWHFRKRSASETESESDPEPEASPEESAESLPPLQPIQPLSF 276
>TAIR|locus:2091757 [details] [associations]
symbol:AT3G24490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] EMBL:CP002686
GO:GO:0003700 EMBL:AB020746 IPI:IPI00516841 RefSeq:NP_189092.1
UniGene:At.37516 ProteinModelPortal:Q9LV59 PRIDE:Q9LV59
EnsemblPlants:AT3G24490.1 GeneID:822039 KEGG:ath:AT3G24490
TAIR:At3g24490 HOGENOM:HOG000091132 InParanoid:Q9LV59 OMA:FVLLEVW
PhylomeDB:Q9LV59 ProtClustDB:CLSN2684511 Genevestigator:Q9LV59
Uniprot:Q9LV59
Length = 333
Score = 187 (70.9 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 34 WSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDT 93
W E+ L++ WG R+L+L R +LR +DW +VA+ V+ + +++ QC+ ID
Sbjct: 90 WREQEAFVLLEVWGDRFLQLGRRSLRNEDWNEVAEKVS----EELRMEKSETQCRRMIDD 145
Query: 94 IKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVKPSSN 135
+K+KY+ EK +V S G +S W FF ++D L+ V P S+
Sbjct: 146 LKRKYRKEKIKVEKS-GLGSSKWSFFNKLDMLLC--VSPKSD 184
Score = 132 (51.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 242 KRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQLERNKRT 301
K LA ++ERFG+VYE++E K QM ELEK R F DLE+Q+ ++ Q ++ R +
Sbjct: 245 KMLADSVERFGKVYEKMEKSKKEQMKELEKMRADFQRDLELQKKQIVDRAQSEIARLREE 304
Query: 302 KRS--GSND 308
+ + G D
Sbjct: 305 EENHHGGGD 313
>TAIR|locus:2096134 [details] [associations]
symbol:AT3G54390 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700
EMBL:AL132971 EMBL:AY084391 EMBL:AY140041 EMBL:BT006322
IPI:IPI00534295 PIR:T47598 RefSeq:NP_191007.1 UniGene:At.35113
ProteinModelPortal:Q9M2U8 IntAct:Q9M2U8 EnsemblPlants:AT3G54390.1
GeneID:824605 KEGG:ath:AT3G54390 TAIR:At3g54390 eggNOG:NOG261072
HOGENOM:HOG000243300 InParanoid:Q9M2U8 OMA:SSFLKIE PhylomeDB:Q9M2U8
ProtClustDB:CLSN2713902 ArrayExpress:Q9M2U8 Genevestigator:Q9M2U8
Uniprot:Q9M2U8
Length = 296
Score = 199 (75.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 41/105 (39%), Positives = 69/105 (65%)
Query: 29 VREDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCK 88
++ D WSE A STL++A+ +++ NR L+ +DW+DVA V++ H+K +T QCK
Sbjct: 33 LKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRATHTKSP-KTQTQCK 91
Query: 89 NRIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLI-GNNVKP 132
N+I+++KK+Y+ E A +++G SSWP + R+D L+ G +P
Sbjct: 92 NKIESMKKRYRSESA---TADG---SSWPLYPRLDHLLRGTQPQP 130
Score = 59 (25.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 242 KRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFAS---DLEMQRLRMFTEMQVQLER 297
+ +A +I EV R E ++ M E+E+ R + + +L+++R + Q+++ R
Sbjct: 215 EEIAGSIRWLAEVVMRSERARMETMKEIERMRAEAEAKRGELDLKRTEIMANTQLEIAR 273
Score = 46 (21.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 241 VKRLAKA-IERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMF 288
V R +A +E E+ ER+ AE + EL+ +R + ++ +++ R+F
Sbjct: 228 VMRSERARMETMKEI-ERMRAEAEAKRGELDLKRTEIMANTQLEIARIF 275
>TAIR|locus:2100108 [details] [associations]
symbol:AT3G10030 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR001048
Pfam:PF00696 SMART:SM00717 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003682 GO:GO:0008652 GO:GO:0016301
Gene3D:3.40.1160.10 SUPFAM:SSF53633 eggNOG:COG0528
HOGENOM:HOG000047187 EMBL:AF375431 EMBL:AY120687 IPI:IPI00535263
RefSeq:NP_566366.1 UniGene:At.28740 ProteinModelPortal:Q94JR1
SMR:Q94JR1 IntAct:Q94JR1 STRING:Q94JR1 PaxDb:Q94JR1 PRIDE:Q94JR1
EnsemblPlants:AT3G10030.1 GeneID:820164 KEGG:ath:AT3G10030
TAIR:At3g10030 InParanoid:Q94JR1 OMA:QINNVKS PhylomeDB:Q94JR1
ProtClustDB:CLSN2684524 Genevestigator:Q94JR1 Uniprot:Q94JR1
Length = 542
Score = 242 (90.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 44/101 (43%), Positives = 74/101 (73%)
Query: 30 REDCWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKN 89
RE+ WS+ A + L+DA+ ++ +LNRGNLR +DW++VA +V+ +K ++ QCKN
Sbjct: 158 REE-WSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSE---RCEKLSKSVEQCKN 213
Query: 90 RIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNV 130
+ID +KK+YK+E+ R+ SS GT S WP+F++M+ ++GN++
Sbjct: 214 KIDNLKKRYKLERHRM-SSGGTAASHWPWFKKMEDIVGNSL 253
>TAIR|locus:2042401 [details] [associations]
symbol:AT2G44730 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 SMART:SM00717 InterPro:IPR006578 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0003682 EMBL:AC003672
Pfam:PF10545 SMART:SM00595 InterPro:IPR017877 PROSITE:PS50090
IPI:IPI00547946 PIR:T01600 RefSeq:NP_182001.1 UniGene:At.36721
ProteinModelPortal:O80512 PaxDb:O80512 PRIDE:O80512
EnsemblPlants:AT2G44730.1 GeneID:819080 KEGG:ath:AT2G44730
TAIR:At2g44730 eggNOG:NOG288281 HOGENOM:HOG000092988
InParanoid:O80512 OMA:MRMEMEM PhylomeDB:O80512
ProtClustDB:CLSN2683226 ArrayExpress:O80512 Genevestigator:O80512
Uniprot:O80512
Length = 372
Score = 177 (67.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 36/95 (37%), Positives = 60/95 (63%)
Query: 33 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRID 92
CWS E T L+DA+ ++ LNRGNL+ W++VA+AV A + +T VQC+++++
Sbjct: 63 CWSLEETIALIDAYRDKWYALNRGNLKANHWEEVAEAVGA-NCPDVILKKTAVQCRHKME 121
Query: 93 TIKKKYK--IEKARVVSSNGTLTSSWPFFERMDTL 125
++K+Y+ I++AR V SSW F+RM+ +
Sbjct: 122 KLRKRYRTEIQRARSVPV-ARFISSWVHFKRMEAM 155
Score = 68 (29.0 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 244 LAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQL 295
+A AI+ G+ R E ++ E+E RM D EM+R +M E Q ++
Sbjct: 301 IASAIKLLGDTLVRTEQTRMEMTREIEAMRM----DTEMKRTKMILESQQRI 348
>TAIR|locus:2087288 [details] [associations]
symbol:AT3G24860 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0003682
InterPro:IPR017877 PROSITE:PS50090 EMBL:AB028609 UniGene:At.37452
EMBL:BT005491 EMBL:AK118157 IPI:IPI00533048 RefSeq:NP_189130.1
UniGene:At.37454 ProteinModelPortal:Q9LRX5 SMR:Q9LRX5 IntAct:Q9LRX5
PaxDb:Q9LRX5 PRIDE:Q9LRX5 EnsemblPlants:AT3G24860.1 GeneID:822084
KEGG:ath:AT3G24860 TAIR:At3g24860 eggNOG:NOG311291
HOGENOM:HOG000153085 InParanoid:Q9LRX5 OMA:MEIRRIN PhylomeDB:Q9LRX5
ProtClustDB:CLSN2684538 Genevestigator:Q9LRX5 Uniprot:Q9LRX5
Length = 310
Score = 141 (54.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 27/101 (26%), Positives = 58/101 (57%)
Query: 34 WSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDT 93
W+++ T L++++ ++ + RG L+ W+++A A ++ RT QC+++I+
Sbjct: 65 WTQDETLLLIESYKEKWFAIGRGPLKSTHWEEIAVAASSRSG----VERTSTQCRHKIEK 120
Query: 94 IKKKYKIEKARVVSSNGTLTSSWPFFERMDTLIGNNVKPSS 134
++K+++ E+ S G + S WPF+ +M+ L +N P S
Sbjct: 121 MRKRFRSER----QSMGPI-SIWPFYNQMEELDSSNPAPIS 156
Score = 58 (25.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 240 GVKRLAKAIERFGEVYERVEAEKLRQMVELEKQRMQFASDLEMQRLRMFTEMQVQL 295
G++ +A I F E +E +K +E K+ ++ ++E++R+ + Q QL
Sbjct: 248 GMRAVAAEIRAFAERVMVMEKKK----IEFAKETVRLRKEMEIRRINLIQSSQTQL 299
>FB|FBgn0039350 [details] [associations]
symbol:jigr1 "jing interacting gene regulatory 1"
species:7227 "Drosophila melanogaster" [GO:0010468 "regulation of
gene expression" evidence=ISM] [GO:0005634 "nucleus" evidence=ISM]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISM] InterPro:IPR006578 EMBL:AE014297 GO:GO:0005634
GO:GO:0044212 Pfam:PF10545 SMART:SM00595 PROSITE:PS51029
GO:GO:0010468 EMBL:AY075409 RefSeq:NP_001097920.1
RefSeq:NP_001097921.1 RefSeq:NP_651409.1 RefSeq:NP_733112.1
RefSeq:NP_733113.1 RefSeq:NP_733114.1 UniGene:Dm.7493 IntAct:Q9VBP5
MINT:MINT-879896 STRING:Q9VBP5 EnsemblMetazoa:FBtr0084886
EnsemblMetazoa:FBtr0084887 EnsemblMetazoa:FBtr0084888
EnsemblMetazoa:FBtr0084889 EnsemblMetazoa:FBtr0113287
EnsemblMetazoa:FBtr0113288 GeneID:43093 KEGG:dme:Dmel_CG17383
UCSC:CG17383-RA CTD:43093 FlyBase:FBgn0039350 eggNOG:NOG136281
InParanoid:Q9VBP5 OMA:RNRYNIE OrthoDB:EOG4NCJV8 ChiTaRS:jigr1
GenomeRNAi:43093 NextBio:832183 Uniprot:Q9VBP5
Length = 336
Score = 110 (43.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 54 NRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKIEKARVVSSNGTLT 113
+R N R KD VA + AH T + + R+ T++ +Y IEK RV + T +
Sbjct: 45 DRSNKRFKDKLYVAHIWEQI-AHKLGYDATSI--RERMTTLRNRYNIEKRRVENGLSTQS 101
Query: 114 SSWPFFERMDTLIGNNVKPSSNF 136
S WP FE + L G++++P +F
Sbjct: 102 SQWPLFESLQFL-GDHIRPRRSF 123
Score = 37 (18.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 178 ALAPIPTATAVALPQK 193
+L +P ATA+ L QK
Sbjct: 283 SLCDMPAATALRLVQK 298
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.128 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 311 233 0.00086 113 3 11 22 0.43 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 611 (65 KB)
Total size of DFA: 177 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.70u 0.15s 20.85t Elapsed: 00:00:01
Total cpu time: 20.71u 0.15s 20.86t Elapsed: 00:00:01
Start: Thu May 9 23:28:31 2013 End: Thu May 9 23:28:32 2013