BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021526
(311 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 155/254 (61%), Gaps = 5/254 (1%)
Query: 22 LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
LVA+K+L E QG + +F EV M+S+ H NL+ L G+C + +RLLVY YM GS+
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + Q PL W R +IA+G+ARGL YLH +P +I+RD+K+ANILLD +F +
Sbjct: 124 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
DFGLAKL D HV V GT G+ APEY +GK + K+D++ +GV+LLELITG++A
Sbjct: 184 GDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 242
Query: 201 MDLSKGQGEQN--LVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA 258
DL++ + + L+ W + LK +KK LVD L G Y + + V +C
Sbjct: 243 FDLARLANDDDVMLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 301
Query: 259 NFRPLINDIVVALD 272
RP ++++V L+
Sbjct: 302 MERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 190 bits (483), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 154/254 (60%), Gaps = 5/254 (1%)
Query: 22 LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
LVA+K+L E QG + +F EV M+S+ H NL+ L G+C + +RLLVY YM GS+
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + Q PL W R +IA+G+ARGL YLH +P +I+RD+K+ANILLD +F +
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
DFGLAKL D HV V G G+ APEY +GK + K+D++ +GV+LLELITG++A
Sbjct: 176 GDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 234
Query: 201 MDLSKGQGEQN--LVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA 258
DL++ + + L+ W + LK +KK LVD L G Y + + V +C
Sbjct: 235 FDLARLANDDDVMLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 293
Query: 259 NFRPLINDIVVALD 272
RP ++++V L+
Sbjct: 294 MERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 152/258 (58%), Gaps = 4/258 (1%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K+ E QG +EF E+ LS H +LV+LIG+C ++ +L+Y+YM G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
LY + +SW R++I +GAARGL YLH +A +I+RD+KS NILLD +F PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FG++K G D TH+ V GT GY PEY + G+LT KSD+YSFGVVL E++ R A+
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
S + NL W+ + + +VDP L + L CL + RP
Sbjct: 243 QSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 263 LINDIVVALDYLVSQRDS 280
+ D++ L+Y + ++S
Sbjct: 302 SMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 151/258 (58%), Gaps = 4/258 (1%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K+ E QG +EF E+ LS H +LV+LIG+C ++ +L+Y+YM G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
LY + +SW R++I +GAARGL YLH +A +I+RD+KS NILLD +F PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FG++K G TH+ V GT GY PEY + G+LT KSD+YSFGVVL E++ R A+
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
S + NL W+ + + +VDP L + L CL + RP
Sbjct: 243 QSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 263 LINDIVVALDYLVSQRDS 280
+ D++ L+Y + ++S
Sbjct: 302 SMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 146/247 (59%), Gaps = 10/247 (4%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+L A+ + E L+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL
Sbjct: 61 KLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D L L+ PLSW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+
Sbjct: 119 DRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKI 174
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
SDFGLA+ T + +R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A
Sbjct: 175 SDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPA 233
Query: 201 MDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF 260
+D + + Q L+ ++K +D ++ + +V + CL+E+ N
Sbjct: 234 VD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNK 290
Query: 261 RPLINDI 267
RP I +
Sbjct: 291 RPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 145/247 (58%), Gaps = 10/247 (4%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+L A+ + E L+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL
Sbjct: 61 KLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D L L+ PLSW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+
Sbjct: 119 DRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKI 174
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
SDFGLA+ T + R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A
Sbjct: 175 SDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPA 233
Query: 201 MDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF 260
+D + + Q L+ ++K +D ++ + +V + CL+E+ N
Sbjct: 234 VD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNK 290
Query: 261 RPLINDI 267
RP I +
Sbjct: 291 RPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 144/247 (58%), Gaps = 10/247 (4%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+L A+ + E L+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL
Sbjct: 55 KLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 112
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D L L+ PLSW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+
Sbjct: 113 DRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKI 168
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
SDFGLA+ + R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A
Sbjct: 169 SDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPA 227
Query: 201 MDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF 260
+D + + Q L+ ++K +D ++ + +V + CL+E+ N
Sbjct: 228 VD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNK 284
Query: 261 RPLINDI 267
RP I +
Sbjct: 285 RPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 141/247 (57%), Gaps = 10/247 (4%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+L A+ + E L+ Q+F E+ + + H+NLV L+G+ + GD LVY Y P GSL
Sbjct: 52 KLAAMVDITTEELK--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLL 109
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D L L+ PLSW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+
Sbjct: 110 DRLSCLD-GTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKI 165
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA 200
SDFGLA+ +R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A
Sbjct: 166 SDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPA 224
Query: 201 MDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF 260
+D + + Q L+ ++K +D + + +V + CL+E+ N
Sbjct: 225 VD--EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNK 281
Query: 261 RPLINDI 267
RP I +
Sbjct: 282 RPDIKKV 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 27/282 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 53 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 112
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 166
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 226 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 281
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQ 277
PR C + + C N N RP D+ + +D + Q
Sbjct: 282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 33/285 (11%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 20 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 79
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 80 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 133
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK---FVHLVDPLL- 234
++ SD++SFGVVL EL T ++ SK + R D++ HL++ L
Sbjct: 193 SVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQMIVFHLIELLKN 245
Query: 235 HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQ 277
+GR PR C + + C N N RP D+ + +D + Q
Sbjct: 246 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 22 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 195 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 250
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 26 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 85
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 86 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 139
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 199 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 254
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 255 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 28 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 87
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 88 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 141
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 201 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 256
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 257 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 22 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 195 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 250
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 21 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 80
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 81 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 134
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 194 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 249
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 250 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 29 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 88
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 89 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 142
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK---FVHLVDPLL- 234
++ SD++SFGVVL EL T ++ SK + R D++ HL++ L
Sbjct: 202 SVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQMIVFHLIELLKN 254
Query: 235 HGRYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
+GR PR C + + C N N RP D+ + +D +
Sbjct: 255 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 22 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK---FVHLVDPLL- 234
++ SD++SFGVVL EL T ++ SK + R D++ HL++ L
Sbjct: 195 SVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQMIVFHLIELLKN 247
Query: 235 HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
+GR PR C + + C N N RP D+ + +D +
Sbjct: 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 27 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 86
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 87 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 140
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK---FVHLVDPLL- 234
++ SD++SFGVVL EL T ++ SK + R D++ HL++ L
Sbjct: 200 SVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQMIVFHLIELLKN 252
Query: 235 HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
+GR PR C + + C N N RP D+ + +D +
Sbjct: 253 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 25 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 84
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 85 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK---FVHLVDPLL- 234
++ SD++SFGVVL EL T ++ SK + R D++ HL++ L
Sbjct: 198 SVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQMIVFHLIELLKN 250
Query: 235 HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
+GR PR C + + C N N RP D+ + +D +
Sbjct: 251 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 40 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 99
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 100 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 153
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 213 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 268
Query: 238 YPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 40 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 99
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 100 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 153
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 213 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 268
Query: 238 YPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 23 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 82
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ +E + ++ +G+EYL K
Sbjct: 83 SAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 136
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+R+L + NIL++N+ K+ DFGL K+ P D + + G + APE K
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 196 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 251
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 252 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 25 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 84
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ EY+P GSL D+ L+ E + ++ +G+EYL K
Sbjct: 85 SAGRRNLKLIMEYLPYGSLRDY---LQAHAERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 198 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 253
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 12 NVGLVWLCD---------QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V +C ++VA+K+L H + ++F E+ +L L HDN+V G C
Sbjct: 25 NFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY 84
Query: 63 SGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
S +R L+ E++P GSL ++ L+ +E + ++ +G+EYL K
Sbjct: 85 SAGRRNLKLIMEFLPYGSLREY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
I+RDL + NIL++N+ K+ DFGL K+ P D + G + APE K
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 179 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGR 237
++ SD++SFGVVL EL T ++ SK + + + Q HL++ L +GR
Sbjct: 198 SVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKNNGR 253
Query: 238 YPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 274
PR C + + C N N RP D+ + +D +
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 23 VAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + EF+ EV ++ L H N+V +G T +V EY+ GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L+ +E L R+ +A A+G+ YLH + NPP+++RDLKS N+L+D + K+
Sbjct: 123 RLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL++L S GT + APE KSD+YSFGV+L EL T
Sbjct: 181 CDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 23 VAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + EF+ EV ++ L H N+V +G T +V EY+ GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L+ +E L R+ +A A+G+ YLH + NPP+++R+LKS N+L+D + K+
Sbjct: 123 RLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 141 SDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL++L +T +S++ GT + APE KSD+YSFGV+L EL T
Sbjct: 181 CDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
LVA+K L Q+F E +L++L H ++V G CT G L+V+EYM G L
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 82 HLYDLEPDQE-----------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
L PD + PL + +A A G+ YL A ++RDL + N
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 189
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
L+ K+ DFG+++ D V R M + PE + K T +SD++SFGVV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 191 LLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAV 247
L E+ T K +P+ Q +D + GR PR C
Sbjct: 250 LWEIFTYGK-----------------QPWY--QLSNTEAIDCITQGRELERPRACPPEVY 290
Query: 248 AVTAMCLNEEANFRPLINDIVVALDYLVS 276
A+ C E R I D+ L L
Sbjct: 291 AIMRGCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
LVA+K L Q+F E +L++L H ++V G CT G L+V+EYM G L
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 82 HLYDLEPDQE-----------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
L PD + PL + +A A G+ YL A ++RDL + N
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 160
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
L+ K+ DFG+++ D V R M + PE + K T +SD++SFGVV
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
Query: 191 LLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAV 247
L E+ T G+Q S +D + GR PR C
Sbjct: 221 LWEIFT----------YGKQPWYQLSN---------TEAIDCITQGRELERPRACPPEVY 261
Query: 248 AVTAMCLNEEANFRPLINDIVVALDYLVS 276
A+ C E R I D+ L L
Sbjct: 262 AIMRGCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
LVA+K L Q+F E +L++L H ++V G CT G L+V+EYM G L
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 82 HLYDLEPDQE-----------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
L PD + PL + +A A G+ YL A ++RDL + N
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 166
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
L+ K+ DFG+++ D V R M + PE + K T +SD++SFGVV
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 226
Query: 191 LLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAV 247
L E+ T G+Q S +D + GR PR C
Sbjct: 227 LWEIFT----------YGKQPWYQLSN---------TEAIDCITQGRELERPRACPPEVY 267
Query: 248 AVTAMCLNEEANFRPLINDIVVALDYLVS 276
A+ C E R I D+ L L
Sbjct: 268 AIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 41/268 (15%)
Query: 22 LVAIKQL---NHEG----LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
+VAIK L + EG ++ QEF EV ++S L+H N+V L G + + +V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFV 103
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
P G L L D P+ W+ ++++ + A G+EY+ + NPP+++RDL+S NI L +
Sbjct: 104 PCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS 159
Query: 135 -DFN----PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AMSGKLTLKSDIYSF 187
D N K++DFGL++ + H + ++G + + APE A T K+D YSF
Sbjct: 160 LDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSF 214
Query: 188 GVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYA 246
++L ++TG D + + KF++++ + L P C
Sbjct: 215 AMILYTILTGEGPFD---------------EYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYL 274
V +C + + RP + IV L L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 41/268 (15%)
Query: 22 LVAIKQL---NHEG----LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
+VAIK L + EG ++ QEF EV ++S L+H N+V L G + + +V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFV 103
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
P G L L D P+ W+ ++++ + A G+EY+ + NPP+++RDL+S NI L +
Sbjct: 104 PCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS 159
Query: 135 -DFN----PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AMSGKLTLKSDIYSF 187
D N K++DFG ++ + H + ++G + + APE A T K+D YSF
Sbjct: 160 LDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSF 214
Query: 188 GVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYA 246
++L ++TG D + + KF++++ + L P C
Sbjct: 215 AMILYTILTGEGPFD---------------EYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYL 274
V +C + + RP + IV L L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T+ Q +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLY 91
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 92 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 145
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 206 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 250
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 251 KKKRDERPLFPQILASIELL 270
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 41/268 (15%)
Query: 22 LVAIKQL---NHEG----LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
+VAIK L + EG ++ QEF EV ++S L+H N+V L G + + +V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFV 103
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
P G L L D P+ W+ ++++ + A G+EY+ + NPP+++RDL+S NI L +
Sbjct: 104 PCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS 159
Query: 135 -DFN----PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AMSGKLTLKSDIYSF 187
D N K++DF L++ + H + ++G + + APE A T K+D YSF
Sbjct: 160 LDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSF 214
Query: 188 GVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYA 246
++L ++TG D + + KF++++ + L P C
Sbjct: 215 AMILYTILTGEGPFD---------------EYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYL 274
V +C + + RP + IV L L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 97 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 150
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 211 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 255
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 256 KKKRDERPLFPQILASIELL 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 32/267 (11%)
Query: 17 WLCDQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
W D VA+K LN Q Q F EV +L H N++ +GY T Q +V ++
Sbjct: 57 WHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWC 113
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
SL HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L
Sbjct: 114 EGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHE 167
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVL 191
D K+ DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL
Sbjct: 168 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 192 LELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVA 248
EL+TG+ + +S +DQ F+ + P L + C
Sbjct: 228 YELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKR 272
Query: 249 VTAMCLNEEANFRPLINDIVVALDYLV 275
+ A CL ++ + RPL I+ +++ L
Sbjct: 273 LMAECLKKKRDERPLFPQILASIELLA 299
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 97 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 150
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 211 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 255
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 256 KKKRDERPLFPQILASIELL 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 92 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 145
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 206 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 250
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 251 KKKRDERPLFPQILASIELL 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 30/261 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 118
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 119 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 172
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 173 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 233 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 277
Query: 255 NEEANFRPLINDIVVALDYLV 275
++ + RPL I+ +++ L
Sbjct: 278 KKKRDERPLFPQILASIELLA 298
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 93
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 94 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 147
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 148 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 208 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 252
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 253 KKKRDERPLFPQILASIELL 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 98/182 (53%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W + VAIK L G + F+ E ++ L HD LV L S + +V EYM
Sbjct: 29 TWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSEEPIYIVTEYMN 86
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L D E L + +A A G+ Y+ + N I+RDL+SANIL+ N
Sbjct: 87 KGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIE-RMN--YIHRDLRSANILVGNG 141
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 142 LICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 195 IT 196
+T
Sbjct: 200 VT 201
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 32/267 (11%)
Query: 17 WLCDQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
W D VA+K LN Q Q F EV +L H N++ +GY T Q +V ++
Sbjct: 57 WHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWC 113
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
SL HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L
Sbjct: 114 EGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHE 167
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVL 191
D K+ DFGLA +H ++ G+ + APE M K + +SD+Y+FG+VL
Sbjct: 168 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 192 LELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVA 248
EL+TG+ + +S +DQ F+ + P L + C
Sbjct: 228 YELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKR 272
Query: 249 VTAMCLNEEANFRPLINDIVVALDYLV 275
+ A CL ++ + RPL I+ +++ L
Sbjct: 273 LMAECLKKKRDERPLFPQILASIELLA 299
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 30/261 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 111
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 112 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 165
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 166 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 226 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 270
Query: 255 NEEANFRPLINDIVVALDYLV 275
++ + RPL I+ +++ L
Sbjct: 271 KKKRDERPLFPQILASIELLA 291
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 95
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ E E + IA ARG++YLH K+ +I+RDLKS NI L D K+
Sbjct: 96 HHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKI 149
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKLTLKSDIYSFGVVLLELITG 197
DFGLA + +H ++ G+ + APE S + +SD+Y+FG+VL EL+TG
Sbjct: 150 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 209
Query: 198 R 198
+
Sbjct: 210 Q 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 126/260 (48%), Gaps = 30/260 (11%)
Query: 23 VAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K LN Q Q F EV +L H N++ +GY T Q +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL+ +E E + + IA A+G++YLH K+ +I+RDLKS NI L D K+
Sbjct: 92 HHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKI 145
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAMSGK--LTLKSDIYSFGVVLLELITG 197
DFGLA +H ++ G+ + APE M K + +SD+Y+FG+VL EL+TG
Sbjct: 146 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 198 RKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+ + +S +DQ F+ + P L + C + A CL
Sbjct: 206 Q--------------LPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAECL 250
Query: 255 NEEANFRPLINDIVVALDYL 274
++ + RPL I+ +++ L
Sbjct: 251 KKKRDERPLFPQILASIELL 270
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 17 WLCDQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
W D VA+K LN Q Q F EV +L H N++ +GY T+ Q +V ++
Sbjct: 45 WHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWC 101
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
SL HL+ E E + IA ARG++YLH K+ +I+RDLKS NI L
Sbjct: 102 EGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHE 155
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKLTLKSDIYSFGVVL 191
D K+ DFGLA +H ++ G+ + APE S + +SD+Y+FG+VL
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 192 LELITGR 198
EL+TG+
Sbjct: 216 YELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 14/187 (7%)
Query: 17 WLCDQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM 74
W D VA+K LN Q Q F EV +L H N++ +GY T Q +V ++
Sbjct: 45 WHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWC 101
Query: 75 PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
SL HL+ E E + IA ARG++YLH K+ +I+RDLKS NI L
Sbjct: 102 EGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHE 155
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKLTLKSDIYSFGVVL 191
D K+ DFGLA +H ++ G+ + APE S + +SD+Y+FG+VL
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 192 LELITGR 198
EL+TG+
Sbjct: 216 YELMTGQ 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 20/198 (10%)
Query: 12 NVGLVWLC---------DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC- 61
N G V LC LVA+KQL H G ++F E+ +L LH D +V G
Sbjct: 22 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 81
Query: 62 TSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
G Q L LV EY+P G L D L + + L + + + +G+EYL +
Sbjct: 82 GPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR---C 135
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
++RDL + NIL++++ + K++DFGLAKL P+ + +V R G + APE
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPESLSDNIF 194
Query: 179 TLKSDIYSFGVVLLELIT 196
+ +SD++SFGVVL EL T
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 12 NVGLVWLC---------DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC- 61
N G V LC LVA+KQL H G ++F E+ +L LH D +V G
Sbjct: 23 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 82
Query: 62 TSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
G Q L LV EY+P G L D L + + L + + + +G+EYL +
Sbjct: 83 GPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR---C 136
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
++RDL + NIL++++ + K++DFGLAKL P+ D + R G + APE
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 179 TLKSDIYSFGVVLLELIT 196
+ +SD++SFGVVL EL T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 20/198 (10%)
Query: 12 NVGLVWLC---------DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 62
N G V LC LVA+KQL H G ++F E+ +L LH D +V G
Sbjct: 35 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 94
Query: 63 S-GDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
G Q L LV EY+P G L D L + + L + + + +G+EYL +
Sbjct: 95 GPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR---C 148
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
++RDL + NIL++++ + K++DFGLAKL P+ + +V R G + APE
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPESLSDNIF 207
Query: 179 TLKSDIYSFGVVLLELIT 196
+ +SD++SFGVVL EL T
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 12 NVGLVWLC---------DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIG--Y 60
N G V LC LVA+KQL H G ++F E+ +L LH D +V G Y
Sbjct: 19 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 78
Query: 61 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
+ LV EY+P G L D L + + L + + + +G+EYL +
Sbjct: 79 GPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR---C 132
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKL 178
++RDL + NIL++++ + K++DFGLAKL P+ + V R G + APE
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQSPIFWYAPESLSDNIF 191
Query: 179 TLKSDIYSFGVVLLELIT 196
+ +SD++SFGVVL EL T
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 20/258 (7%)
Query: 21 QLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT-SGDQRL-LVYEYMPMG 77
++VA+K L + G Q + E+ +L L+H++++ G C +G L LV EY+P+G
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL D+L + + + A G+ YLH + I+RDL + N+LLDND
Sbjct: 121 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRL 172
Query: 138 PKLSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+ DFGLAK P G + V + APE K SD++SFGV L EL+T
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
Query: 197 GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNYAVAVTAMC 253
D S+ + L + Q + L + L G R PR +C + C
Sbjct: 233 ---HCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNC 287
Query: 254 LNEEANFRPLINDIVVAL 271
EA+FRP +++ L
Sbjct: 288 WETEASFRPTFENLIPIL 305
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
LVA+K L L ++F E +L+ L H+++V G C GD ++V+EYM G L
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106
Query: 82 HLYDLEPD------------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
L PD + L + + IA A G+ YL A+ ++RDL + N
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRN 163
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
L+ + K+ DFG+++ D V M + PE M K T +SD++SFGV
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 190 VLLELIT 196
+L E+ T
Sbjct: 224 ILWEIFT 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 22/259 (8%)
Query: 21 QLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT-SGDQRL-LVYEYMPMG 77
++VA+K L + G Q + E+ +L L+H++++ G C G++ L LV EY+P+G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL D+L + + + A G+ YLH + I+R+L + N+LLDND
Sbjct: 104 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRL 155
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLAK P G + + R G + APE K SD++SFGV L EL+
Sbjct: 156 VKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNYAVAVTAM 252
T D S+ + L + Q + L + L G R PR +C +
Sbjct: 215 T---HCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN 269
Query: 253 CLNEEANFRPLINDIVVAL 271
C EA+FRP +++ L
Sbjct: 270 CWETEASFRPTFENLIPIL 288
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 22/259 (8%)
Query: 21 QLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT-SGDQRL-LVYEYMPMG 77
++VA+K L + G Q + E+ +L L+H++++ G C G++ L LV EY+P+G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL D+L + + + A G+ YLH + I+R+L + N+LLDND
Sbjct: 104 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRL 155
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMGTYG--YCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLAK P G + + R G + APE K SD++SFGV L EL+
Sbjct: 156 VKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNYAVAVTAM 252
T D S+ + L + Q + L + L G R PR +C +
Sbjct: 215 T---HCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN 269
Query: 253 CLNEEANFRPLINDIVVAL 271
C EA+FRP +++ L
Sbjct: 270 CWETEASFRPTFENLIPIL 288
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 28/197 (14%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFI----VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
W+ D+ VA+K H+ + + I E + ++L H N++ L G C LV E
Sbjct: 28 WIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86
Query: 73 YMPMGSLEDHLYDLE-PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
+ G L L P ++W AV ARG+ YLH +A P+I+RDLKS+NIL
Sbjct: 87 FARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140
Query: 132 L-----DNDFNP---KLSDFGLAKLGPVGDNTHVSTRV--MGTYGYCAPEYAMSGKLTLK 181
+ + D + K++DFGLA+ H +T++ G Y + APE + +
Sbjct: 141 ILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 182 SDIYSFGVVLLELITGR 198
SD++S+GV+L EL+TG
Sbjct: 195 SDVWSYGVLLWELLTGE 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 21 QLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR--LLVYEYMPMG 77
++VA+K L G Q + E+ +L L+H+++V G C ++ LV EY+P+G
Sbjct: 38 EMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 97
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL D+L + + + A G+ YLH + I+R L + N+LLDND
Sbjct: 98 SLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 149
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFGLAK P G + + R G + Y APE K SD++SFGV L EL
Sbjct: 150 VKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 207
Query: 195 ITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNYAVAVTA 251
+T Q + + Q + L + L G R PR RC +
Sbjct: 208 LTY-----CDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMK 262
Query: 252 MCLNEEANFRPLINDIVVAL 271
C EA+FRP ++V L
Sbjct: 263 NCWETEASFRPTFQNLVPIL 282
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
LVA+K L ++F E +L+ L H+++V G C GD ++V+EYM G L
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 82 HLYDLEPDQ---------EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
L PD L+ + + IA A G+ YL A+ ++RDL + N L+
Sbjct: 105 FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLV 161
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+ K+ DFG+++ D V M + PE M K T +SD++S GVVL
Sbjct: 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 221
Query: 193 ELIT 196
E+ T
Sbjct: 222 EIFT 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 21 QLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR--LLVYEYMPMG 77
++VA+K L G Q + E+ +L L+H+++V G C ++ LV EY+P+G
Sbjct: 39 EMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 98
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL D+L + + + A G+ YLH + I+R L + N+LLDND
Sbjct: 99 SLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 150
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFGLAK P G + + R G + Y APE K SD++SFGV L EL
Sbjct: 151 VKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 208
Query: 195 ITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNYAVAVTA 251
+T Q + + Q + L + L G R PR RC +
Sbjct: 209 LTY-----CDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMK 263
Query: 252 MCLNEEANFRPLINDIVVAL 271
C EA+FRP ++V L
Sbjct: 264 NCWETEASFRPTFQNLVPIL 283
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT +V EYMP G+L D+
Sbjct: 60 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E ++E ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 119 L--RECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVAD 173
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE ++KSD+++FGV+L E+ T
Sbjct: 174 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 46 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 104 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 158
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 159 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 45 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 102
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 103 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 157
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 158 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 14 GLVWLC----DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL 69
G VW+ VA+K L G Q F+ E ++ L HD LV L T + +
Sbjct: 27 GEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYI 85
Query: 70 VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+ EYM GSL D L E + L + + A G+ Y+ K I+RDL++AN
Sbjct: 86 ITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAAN 140
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
+L+ K++DFGLA++ + DN + + + APE G T+KSD++SFG
Sbjct: 141 VLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFG 198
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNY 245
++L E++T K G N ++ L G R PR C +
Sbjct: 199 ILLYEIVTYGKI----PYPGRTN---------------ADVMTALSQGYRMPRVENCPDE 239
Query: 246 AVAVTAMCLNEEANFRPLINDIVVALD 272
+ MC E+A RP + + LD
Sbjct: 240 LYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 50 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 107
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 108 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 162
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 163 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 15/191 (7%)
Query: 14 GLVWLCD----QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL 69
G VW+ VA+K + G + F+ E ++ L HD LV L T + +
Sbjct: 29 GEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 86
Query: 70 VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+ E+M GSL D L E ++PL + + A G+ ++ + I+RDL++AN
Sbjct: 87 ITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAAN 141
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
IL+ K++DFGLA++ + DN + + + APE G T+KSD++SFG
Sbjct: 142 ILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 199
Query: 189 VVLLELIT-GR 198
++L+E++T GR
Sbjct: 200 ILLMEIVTYGR 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 35 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 92
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 93 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 147
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 148 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 98 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 153 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 24/270 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 39 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 98 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 153 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 207
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 208 MSPYPG------------IDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARG 291
+I A + + + S V + G RG
Sbjct: 256 SFAEIHQAFETMFQESSISDEVEKELGKRG 285
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 115/270 (42%), Gaps = 37/270 (13%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P + +++A A G+ YL+ K ++RDL + N ++ +D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + APE G T SD++SFGVVL E I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-I 225
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAVTAM 252
T EQ L KFV + G Y P C + M
Sbjct: 226 TSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTDLMRM 267
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRDSHP 282
C N RP +IV L + D HP
Sbjct: 268 CWQFNPNMRPTFLEIVNLL-----KDDLHP 292
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 46 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 104 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 158
Query: 143 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + R + + APE G T+KSD++SFG++L E++T
Sbjct: 159 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 48 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 105
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 106 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 160
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + APE G T+KSD++SFG++L E++T
Sbjct: 161 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 41 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 98
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 99 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 153
Query: 143 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + R + + APE G T+KSD++SFG++L E++T
Sbjct: 154 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 49 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 106
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 107 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 161
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + APE G T+KSD++SFG++L E++T
Sbjct: 162 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 14 GLVWLCD----QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL 69
G VW+ VA+K + G + F+ E ++ L HD LV L T + +
Sbjct: 202 GEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 259
Query: 70 VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+ E+M GSL D L E ++PL + + A G+ ++ + I+RDL++AN
Sbjct: 260 ITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAAN 314
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
IL+ K++DFGLA++ + DN + + + APE G T+KSD++SFG
Sbjct: 315 ILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372
Query: 189 VVLLELIT 196
++L+E++T
Sbjct: 373 ILLMEIVT 380
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 98 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + APE G T+KSD++SFG++L E++T
Sbjct: 153 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 42 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 100 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + R + + APE G T+KSD++SFG++L E++T
Sbjct: 155 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VAIKQ+ E + + FIVE+ LS ++H N+V L G C + LV EY GSL
Sbjct: 35 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL--- 87
Query: 83 LYDLEPDQEPLSWNTR---MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP- 138
Y++ EPL + T M + ++G+ YLH +I+RDLK N+LL
Sbjct: 88 -YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
K+ DFG A TH+ T G+ + APE + K D++S+G++L E+IT R
Sbjct: 147 KICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 201
Query: 199 KAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM---CLN 255
K D G + + W+ VH +G P N + ++ C +
Sbjct: 202 KPFDEIGGPAFR--IMWA----------VH------NGTRPPLIKNLPKPIESLMTRCWS 243
Query: 256 EEANFRPLINDIVVALDYLV 275
++ + RP + +IV + +L+
Sbjct: 244 KDPSQRPSMEEIVKIMTHLM 263
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 98 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 143 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + R + + APE G T+KSD++SFG++L E++T
Sbjct: 153 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 105 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 214
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 215 MSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARGV 292
+I A + + + S V + G RG
Sbjct: 263 SFAEIHQAFETMFQESSISDEVEKELGKRGT 293
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 24/270 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 39 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 98 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 153 FGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 207
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 208 MSPYPG------------IDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARG 291
+I A + + + S V + G RG
Sbjct: 256 SFAEIHQAFETMFQESSISDEVEKELGKRG 285
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 39 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 98 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 153 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VAIKQ+ E + + FIVE+ LS ++H N+V L G C + LV EY GSL
Sbjct: 34 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL--- 86
Query: 83 LYDLEPDQEPLSWNTR---MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP- 138
Y++ EPL + T M + ++G+ YLH +I+RDLK N+LL
Sbjct: 87 -YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
K+ DFG A TH+ T G+ + APE + K D++S+G++L E+IT R
Sbjct: 146 KICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200
Query: 199 KAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM---CLN 255
K D G + + W+ VH +G P N + ++ C +
Sbjct: 201 KPFDEIGGPAFR--IMWA----------VH------NGTRPPLIKNLPKPIESLMTRCWS 242
Query: 256 EEANFRPLINDIVVALDYLV 275
++ + RP + +IV + +L+
Sbjct: 243 KDPSQRPSMEEIVKIMTHLM 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 209
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 210 MSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARGV 292
+I A + + + S V + G RG
Sbjct: 258 SFAEIHQAFETMFQESSISDEVEKELGKRGT 288
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 21 QLVAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTS--GDQRLLVYEYMPMG 77
+ VA+K L E H + E+ +L L+H+N+V G CT G+ L+ E++P G
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL+++L ++ ++ ++K AV +G++YL + ++RDL + N+L++++
Sbjct: 99 SLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 152
Query: 138 PKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGL K T R + Y APE M K + SD++SFGV L EL+
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
Query: 196 T 196
T
Sbjct: 212 T 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 21 QLVAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTS--GDQRLLVYEYMPMG 77
+ VA+K L E H + E+ +L L+H+N+V G CT G+ L+ E++P G
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL+++L ++ ++ ++K AV +G++YL + ++RDL + N+L++++
Sbjct: 111 SLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 164
Query: 138 PKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGL K T R + Y APE M K + SD++SFGV L EL+
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
Query: 196 T 196
T
Sbjct: 224 T 224
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 209
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 210 MSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARGV 292
+I A + + + S V + G RG
Sbjct: 258 SFAEIHQAFETMFQESSISDEVEKELGKRGT 288
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 36 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 93
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+R+L++ANIL+ + + K++D
Sbjct: 94 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIAD 148
Query: 143 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L + DN + + + APE G T+KSD++SFG++L E++T
Sbjct: 149 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L +G F+ E ++ L H LV L T + ++ EYM GSL D
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L P L+ N + +A A G+ ++ + I+RDL++ANIL+ + + K++D
Sbjct: 98 LKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 143 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+L ++ + R + + APE G T+KSD++SFG++L E++T
Sbjct: 153 FGLARL---IEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 31 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 88
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 89 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 143
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 144 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 195 IT 196
T
Sbjct: 202 TT 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 105 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 160 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 287 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 344
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 345 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 399
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 400 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 195 IT 196
T
Sbjct: 458 TT 459
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 42 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 101 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 156 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 14 GLVWLC----DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL 69
G VW+ VA+K L G Q F+ E ++ L HD LV L T + +
Sbjct: 26 GEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI 84
Query: 70 VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+ E+M GSL D L E + L + + A G+ Y+ K I+RDL++AN
Sbjct: 85 ITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAAN 139
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
+L+ K++DFGLA++ + DN + + + APE G T+KS+++SFG
Sbjct: 140 VLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFG 197
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR--RCLNY 245
++L E++T K G N ++ L G R PR C +
Sbjct: 198 ILLYEIVTYGKI----PYPGRTN---------------ADVMSALSQGYRMPRMENCPDE 238
Query: 246 AVAVTAMCLNEEANFRPLINDIVVALD 272
+ MC E+A RP + + LD
Sbjct: 239 LYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 204 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 261
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 262 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 316
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 317 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 195 IT 196
T
Sbjct: 375 TT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 204 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 261
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 262 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 316
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 317 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 195 IT 196
T
Sbjct: 375 TT 376
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 105 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 105 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 114/270 (42%), Gaps = 37/270 (13%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P + +++A A G+ YL+ K ++RDL + N ++ +D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + APE G T SD++SFGVVL E I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-I 225
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAVTAM 252
T EQ L KFV + G Y P C + M
Sbjct: 226 TSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTDLMRM 267
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRDSHP 282
C RP +IV L + D HP
Sbjct: 268 CWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 100 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 45 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 104 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 158
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 159 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 114/270 (42%), Gaps = 37/270 (13%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G L+
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P + +++A A G+ YL+ K ++RDL + N ++ +D
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 163
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + APE G T SD++SFGVVL E I
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-I 222
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAVTAM 252
T EQ L KFV + G Y P C + M
Sbjct: 223 TSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTDLMRM 264
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRDSHP 282
C RP +IV L + D HP
Sbjct: 265 CWQFNPKMRPTFLEIVNLL-----KDDLHP 289
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 24/271 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 105 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 214
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 215 MSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARGV 292
+I A + + + S V + G +GV
Sbjct: 263 SFAEIHQAFETMFQESSISDEVEKELGKQGV 293
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 42 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 101 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 156 FGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W D V I ++ + Q F EV +L H N++ +GY T D +V ++
Sbjct: 57 WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
SL HL+ E + + IA A+G++YLH K +I+RD+KS NI L
Sbjct: 116 SSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGL 169
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKLTLKSDIYSFGVVLLE 193
K+ DFGLA + + + G+ + APE + + +SD+YS+G+VL E
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE 229
Query: 194 LITG 197
L+TG
Sbjct: 230 LMTG 233
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 102 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 157 FGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 14 GLVWLCD----QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL 69
G VW+ VA+K + G + F+ E ++ L HD LV L T + +
Sbjct: 196 GEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 253
Query: 70 VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+ E+M GSL D L E ++PL + + A G+ ++ + I+RDL++AN
Sbjct: 254 ITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAAN 308
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
IL+ K++DFGLA++G + APE G T+KSD++SFG+
Sbjct: 309 ILVSASLVCKIADFGLARVG-----------AKFPIKWTAPEAINFGSFTIKSDVWSFGI 357
Query: 190 VLLELIT-GR 198
+L+E++T GR
Sbjct: 358 LLMEIVTYGR 367
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 54 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 113 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 167
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 168 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 204 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMS 261
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 262 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 316
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 317 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 195 IT 196
T
Sbjct: 375 TT 376
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 102 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 157 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 27 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 84
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 85 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 139
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 140 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 195 IT 196
T
Sbjct: 198 TT 199
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+RDL + N L+ + K++D
Sbjct: 102 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 157 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 28 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMS 85
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 86 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 140
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 141 LVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 195 IT 196
T
Sbjct: 199 TT 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 29 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 86
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 87 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 141
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 142 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 195 IT 196
T
Sbjct: 200 TT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 248 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ +S + +A + +EYL K I+R+L + N L+ + K++D
Sbjct: 307 L--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 361
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 362 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YG 416
Query: 203 LSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRP 262
+S G D + L++ P C + C + RP
Sbjct: 417 MSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464
Query: 263 LINDIVVALDYLVSQRD-SHPVSRNAGARGV 292
+I A + + + S V + G RG
Sbjct: 465 SFAEIHQAFETMFQESSISDEVEKELGKRGT 495
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 35 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMN 92
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + ++ A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 93 KGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 147
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 148 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 195 IT 196
T
Sbjct: 206 TT 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L EP +E LS + A ARG+EYL K I+RDL +
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ + H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K+++ Q + EV+++ HHDN+V + GD+ +V E++ G+L D
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
+ ++E ++ + + R L YLH N VI+RD+KS +ILL +D KLSD
Sbjct: 133 VTHTRMNEEQIA-----TVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSD 184
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
FG V ++GT + APE + DI+S G++++E+I G
Sbjct: 185 FGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 19 CDQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
+ VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G
Sbjct: 47 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 78 SLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
L+ +L L P+ E P + +++A A G+ YL+ K ++R+L + N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 163
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +DF K+ DFG+ + D + + + APE G T SD++SFGVVL
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 223
Query: 192 LELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVA 248
E IT EQ L KFV + G Y P C
Sbjct: 224 WE-ITSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTD 264
Query: 249 VTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 282
+ MC N RP +IV L + D HP
Sbjct: 265 LMRMCWQFNPNMRPTFLEIVNLL-----KDDLHP 293
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 19 CDQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
+ VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 78 SLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
L+ +L L P+ E P + +++A A G+ YL+ K ++R+L + N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 162
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +DF K+ DFG+ + D + + + APE G T SD++SFGVVL
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 192 LELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVA 248
E IT EQ L KFV + G Y P C
Sbjct: 223 WE-ITSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTD 263
Query: 249 VTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 282
+ MC N RP +IV L + D HP
Sbjct: 264 LMRMCWQFNPNMRPTFLEIVNLL-----KDDLHP 292
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL +ANIL+ +
Sbjct: 96 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLAAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 168
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 169 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 196 T 196
T
Sbjct: 229 T 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 159
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 160 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 219
Query: 196 T 196
T
Sbjct: 220 T 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 114/270 (42%), Gaps = 37/270 (13%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P + +++A A G+ YL+ K ++RDL + N ++ +D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + APE G T SD++SFGVVL E I
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-I 225
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAVTAM 252
T EQ L KFV + G Y P C + M
Sbjct: 226 TSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVTDLMRM 267
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRDSHP 282
C RP +IV L + D HP
Sbjct: 268 CWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E LS + A ARG+EYL K I+RDL +
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 35 TWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMN 92
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + ++ A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 93 KGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 147
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 148 LVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 195 IT 196
T
Sbjct: 206 TT 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 30/263 (11%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G + +++ EYM G+L+
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + + L ++ G A G++YL AN ++RDL + NIL++++ K+S
Sbjct: 136 FLREKDGEFSVLQLVGMLR---GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + APE K T SD++SFG+V+ E++T
Sbjct: 190 DFGLSRV--LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-- 245
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
GE RP+ + + + ++ P C + + C +E
Sbjct: 246 --------YGE-------RPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQE 290
Query: 258 ANFRPLINDIVVALDYLVSQRDS 280
RP DIV LD L+ DS
Sbjct: 291 RARRPKFADIVSILDKLIRAPDS 313
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 287 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+R+L + N L+ + K++D
Sbjct: 346 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 400
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 401 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 19 CDQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
+ VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G
Sbjct: 45 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 104
Query: 78 SLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
L+ +L L P+ E P + +++A A G+ YL+ K ++RDL + N +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 161
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +DF K+ DFG+ + D + + + APE G T SD++SFGVVL
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 221
Query: 192 LELIT 196
E+ +
Sbjct: 222 WEITS 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K L + ++ +EF+ E ++ + H NLV L+G CT ++ E+M G+L D+
Sbjct: 245 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L E +++ ++ + +A + +EYL K I+R+L + N L+ + K++D
Sbjct: 304 L--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 358
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGL++L GD + APE K ++KSD+++FGV+L E+ T
Sbjct: 359 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG ++FI E ++ L H LV L G C LV+E+M
Sbjct: 28 WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 86
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 87 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQ 140
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 141 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 197 GRK 199
K
Sbjct: 200 EGK 202
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 38 TWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMS 95
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 96 KGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 150
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGLA+L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 151 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 195 IT 196
T
Sbjct: 209 TT 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L Y P P LS + A ARG+EYL K I+RDL +
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 172
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 173 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 228 VWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L Y P P LS + A ARG+EYL K I+RDL +
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L Y P P LS + A ARG+EYL K I+RDL +
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 171
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 172 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 227 VWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L Y P P LS + A ARG+EYL K I+RDL +
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 168
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 169 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 224 VWSFGVLLWEIFT 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E LS + A ARG+EYL K I+RDL +
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 164
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 165 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 220 VWSFGVLLWEIFT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 123 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 172
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ L D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 173 VKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 233 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 273
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 274 CWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E LS + A ARG+EYL K I+RDL +
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K +N L+ EF+ E ++ ++V L+G + G L+V E M G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P + +++A A G+ YL+ K ++RDL + N ++ +D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSDIYSFGVV 190
F K+ DFG+ + D + G G + APE G T SD++SFGVV
Sbjct: 167 FTVKIGDFGMTR-----DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 191 LLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAV 247
L E IT EQ L KFV + G Y P C
Sbjct: 222 LWE-ITSLAEQPYQGLSNEQVL------------KFV------MDGGYLDQPDNCPERVT 262
Query: 248 AVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 282
+ MC RP +IV L + D HP
Sbjct: 263 DLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 16 VWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
W VAIK L G + F+ E ++ L H+ LV L S + +V EYM
Sbjct: 205 TWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMS 262
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
GSL D L + L + +A A G+ Y+ + N ++RDL++ANIL+ +
Sbjct: 263 KGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHRDLRAANILVGEN 317
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K++DFGL +L + DN + + + + APE A+ G+ T+KSD++SFG++L EL
Sbjct: 318 LVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 195 IT 196
T
Sbjct: 376 TT 377
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG ++FI E ++ L H LV L G C LV+E+M
Sbjct: 31 WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 90 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 143
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 144 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 197 GRK 199
K
Sbjct: 203 EGK 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + I E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L Y P P LS + A ARG+EYL K I+RDL +
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 220
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSD 183
N+L+ D K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 221 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 184 IYSFGVVLLELIT 196
++SFGV+L E+ T
Sbjct: 276 VWSFGVLLWEIFT 288
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG ++FI E ++ L H LV L G C LV+E+M
Sbjct: 28 WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 86
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 87 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 140
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 141 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 197 GRK 199
K
Sbjct: 200 EGK 202
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGD 65
+C+ G ++ C +L + +G QG +VE +L+ +H +V+L +
Sbjct: 202 FACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLAYAFETKT 258
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
LV M G + H+Y+++ D QEP + +I GLE+LH + +I
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEHLHQRN---II 311
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
YRDLK N+LLD+D N ++SD GLA G + GT G+ APE + +
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 182 SDIYSFGVVLLELITGR 198
D ++ GV L E+I R
Sbjct: 370 VDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGD 65
+C+ G ++ C +L + +G QG +VE +L+ +H +V+L +
Sbjct: 202 FACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLAYAFETKT 258
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
LV M G + H+Y+++ D QEP + +I GLE+LH + +I
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEHLHQRN---II 311
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
YRDLK N+LLD+D N ++SD GLA G + GT G+ APE + +
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 182 SDIYSFGVVLLELITGR 198
D ++ GV L E+I R
Sbjct: 370 VDYFALGVTLYEMIAAR 386
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG ++FI E ++ L H LV L G C LV+E+M
Sbjct: 26 WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 84
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 85 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 138
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 139 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 197 GRK 199
K
Sbjct: 198 EGK 200
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGD 65
+C+ G ++ C +L + +G QG +VE +L+ +H +V+L +
Sbjct: 202 FACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLAYAFETKT 258
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
LV M G + H+Y+++ D QEP + +I GLE+LH + +I
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEHLHQRN---II 311
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
YRDLK N+LLD+D N ++SD GLA G + GT G+ APE + +
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 182 SDIYSFGVVLLELITGR 198
D ++ GV L E+I R
Sbjct: 370 VDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGD 65
+C+ G ++ C +L + +G QG +VE +L+ +H +V+L +
Sbjct: 202 FACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLAYAFETKT 258
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
LV M G + H+Y+++ D QEP + +I GLE+LH + +I
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEHLHQRN---II 311
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
YRDLK N+LLD+D N ++SD GLA G + GT G+ APE + +
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFS 369
Query: 182 SDIYSFGVVLLELITGR 198
D ++ GV L E+I R
Sbjct: 370 VDYFALGVTLYEMIAAR 386
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 165
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 225
Query: 196 T 196
T
Sbjct: 226 T 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 167
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 196 T 196
T
Sbjct: 228 T 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 168
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 169 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 196 T 196
T
Sbjct: 229 T 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 161
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 196 T 196
T
Sbjct: 222 T 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 167
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 196 T 196
T
Sbjct: 228 T 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 196 T 196
T
Sbjct: 235 T 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 196
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 197 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 196 T 196
T
Sbjct: 257 T 257
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 30 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 88
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 89 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 142
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+SDFGL++ V D+ + S+R + PE M K + KSDI++FGV++ E+
Sbjct: 143 VVKVSDFGLSRY--VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 200
Query: 196 T 196
+
Sbjct: 201 S 201
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q VAI+Q+N + + I E+L++ + N+V + GD+ +V EY+ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + D+ ++ R + LE+LH VI+RD+KS NILL D + KL
Sbjct: 106 DVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 141 SDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG A++ P + + ST V GT + APE K DI+S G++ +E+I G
Sbjct: 158 TDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 181 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 230
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 231 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 291 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 331
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 332 CWHPKAEMRPSFSELVSRISAIFS 355
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGLA++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLARV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 123 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 172
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 173 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 233 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 273
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 274 CWHPKAEMRPSFSELVSRISAIFS 297
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 32/212 (15%)
Query: 14 GLVW---LCDQLVAIKQLNHEGLQGHQEFIVEVLMLSL--LHHDNLVTLIGYCTSGD--- 65
G VW L + VA+K LQ Q + E + S + H+NL+ I G
Sbjct: 29 GCVWKAQLMNDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 66 -QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH-----CKA--- 116
+ L+ + GSL D+L ++WN +A +RGL YLH C+
Sbjct: 86 VELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 117 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 176
P + +RD KS N+LL +D L+DFGLA G + +GT Y APE + G
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEG 199
Query: 177 KLT------LKSDIYSFGVVLLELITGRKAMD 202
+ L+ D+Y+ G+VL EL++ KA D
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 127 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 176
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 177 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 237 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 277
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 278 CWHPKAEMRPSFSELVSRISAIFS 301
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG +FI E ++ L H LV L G C LV+E+M
Sbjct: 48 WLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 106
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 107 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 160
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 161 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Query: 197 GRK 199
K
Sbjct: 220 EGK 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 122 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 171
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 232 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 273 CWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 122 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 171
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 232 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 273 CWHPKAEMRPSFSELVSRISAIFS 296
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G+++L A+ ++RDL + N +LD F
Sbjct: 120 FIRNE-------THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFT 169
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ D+ H T + A E + K T KSD++SFGV+L EL+
Sbjct: 170 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 230 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 270
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 271 CWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 14 GLVW---LCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIG---YCTSGDQR 67
G VW L ++ VA+K + Q Q EV L + H+N++ IG TS D
Sbjct: 38 GCVWKAQLLNEYVAVKIFPIQDKQSWQNE-YEVYSLPGMKHENILQFIGAEKRGTSVDVD 96
Query: 68 L-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA-------NPP 119
L L+ + GSL D L +SWN IA ARGL YLH P
Sbjct: 97 LWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA 151
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT 179
+ +RD+KS N+LL N+ ++DFGLA G + + +GT Y APE + G +
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAIN 210
Query: 180 ------LKSDIYSFGVVLLELITGRKAMD 202
L+ D+Y+ G+VL EL + A D
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 82 HLYDLEPDQE------PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P+ E P S + +++A A G+ YL+ ++RDL + N + D
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAED 161
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 196 T 196
T
Sbjct: 222 T 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 23 VAIKQLNHEGLQ-GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK++N E Q E + E+ +S HH N+V+ D+ LV + + GS+ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 82 HLYDL----EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + E L +T I GLEYLH I+RD+K+ NILL D +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 138 PKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLE 193
+++DFG+ A L GD T R +GT + APE + K+DI+SFG+ +E
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 194 LITG 197
L TG
Sbjct: 215 LATG 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q VAI+Q+N + + I E+L++ + N+V + GD+ +V EY+ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + D+ ++ R + LE+LH VI+RD+KS NILL D + KL
Sbjct: 106 DVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 141 SDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG A++ P + ++GT + APE K DI+S G++ +E+I G
Sbjct: 158 TDFGFCAQITP---EQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
WL VAIK + EG ++FI E ++ L H LV L G C LV E+M
Sbjct: 29 WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D+ L + + T + + + G+ YL VI+RDL + N L+ +
Sbjct: 88 GCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 141
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFG+ + + D ST + +PE + + KSD++SFGV++ E+ +
Sbjct: 142 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 197 GRK 199
K
Sbjct: 201 EGK 203
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 124 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 177
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 178 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 231
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 232 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 278
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 279 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 311
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 107 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 161 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 214
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 215 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 261
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 262 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
Q VAIK L + +G +EF E ++ + L H N+V L+G T +++ Y G
Sbjct: 40 QAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 79 LEDHLYDLEPDQEPLSWNTR------------MKIAVGAARGLEYLHCKANPPVIYRDLK 126
L + L P + S + + + A G+EYL ++ V+++DL
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 155
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ N+L+ + N K+SD GL + D + + + APE M GK ++ SDI+S
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 215
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+GVVL E+ + + G Q++V +++++ V P P C +
Sbjct: 216 YGVVLWEVFS--YGLQPYCGYSNQDVVE----MIRNRQ-----VLPC-----PDDCPAWV 259
Query: 247 VAVTAMCLNEEANFRPLINDI 267
A+ C NE + RP DI
Sbjct: 260 YALMIECWNEFPSRRPRFKDI 280
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 121 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 170
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 171 VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 231 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 271
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 272 CWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 23 VAIKQLNHEGLQ-GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK++N E Q E + E+ +S HH N+V+ D+ LV + + GS+ D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 82 HLYDL----EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + E L +T I GLEYLH I+RD+K+ NILL D +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 138 PKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLE 193
+++DFG+ A L GD T R +GT + APE + K+DI+SFG+ +E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 194 LITG 197
L TG
Sbjct: 220 LATG 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q VAI+Q+N + + I E+L++ + N+V + GD+ +V EY+ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + D+ ++ R + LE+LH VI+RD+KS NILL D + KL
Sbjct: 106 DVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 141 SDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG A++ P + ++GT + APE K DI+S G++ +E+I G
Sbjct: 158 TDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q VAI+Q+N + + I E+L++ + N+V + GD+ +V EY+ GSL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + D+ ++ R + LE+LH VI+RD+KS NILL D + KL
Sbjct: 107 DVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 158
Query: 141 SDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG A++ P + ++GT + APE K DI+S G++ +E+I G
Sbjct: 159 TDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 134 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 187
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 188 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 241
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 242 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 288
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 289 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 321
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
Q VAIK L + +G +EF E ++ + L H N+V L+G T +++ Y G
Sbjct: 57 QAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 79 LEDHLYDLEPDQEPLSWNTR------------MKIAVGAARGLEYLHCKANPPVIYRDLK 126
L + L P + S + + + A G+EYL ++ V+++DL
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 172
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ N+L+ + N K+SD GL + D + + + APE M GK ++ SDI+S
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 232
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+GVVL E+ + + G Q++V +++++ V P P C +
Sbjct: 233 YGVVLWEVFS--YGLQPYCGYSNQDVVE----MIRNRQ-----VLPC-----PDDCPAWV 276
Query: 247 VAVTAMCLNEEANFRPLINDI 267
A+ C NE + RP DI
Sbjct: 277 YALMIECWNEFPSRRPRFKDI 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
+V +KQ+ H E LMLS++ H ++ + G Q ++ +Y+ G L
Sbjct: 44 VVRLKQVEHTN--------DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS 95
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + P++ A LEYLH K +IYRDLK NILLD + + K++
Sbjct: 96 LLRKSQRFPNPVA----KFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKIT 148
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
DFG AK P V+ + GT Y APE + D +SFG+++ E++ G
Sbjct: 149 DFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q VAI+Q+N + + I E+L++ + N+V + GD+ +V EY+ GSL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + D+ ++ R + LE+LH VI+R++KS NILL D + KL
Sbjct: 107 DVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKL 158
Query: 141 SDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG A++ P + + ST V GT + APE K DI+S G++ +E+I G
Sbjct: 159 TDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL ++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLGRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 25 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 83
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 84 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 137
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFGL++ V D+ + S+ +G+ + PE M K + KSDI++FGV++ E
Sbjct: 138 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 194 LIT 196
+ +
Sbjct: 194 IYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 30 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 88
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 89 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 142
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFGL++ V D+ + S+ +G+ + PE M K + KSDI++FGV++ E
Sbjct: 143 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 194 LIT 196
+ +
Sbjct: 199 IYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 45 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 157
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFGL++ V D+ + S+ +G+ + PE M K + KSDI++FGV++ E
Sbjct: 158 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213
Query: 194 LIT 196
+ +
Sbjct: 214 IYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 29 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 87
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 88 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 141
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFGL++ V D+ + S+ +G+ + PE M K + KSDI++FGV++ E
Sbjct: 142 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 197
Query: 194 LIT 196
+ +
Sbjct: 198 IYS 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 45 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 157
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFGL++ + D S + PE M K + KSDI++FGV++ E+ +
Sbjct: 158 VVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VAIK + EG EFI E ++ L H+ LV L G CT ++ EYM
Sbjct: 36 WRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 94
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L ++ + +++ +EYL K ++RDL + N L+++
Sbjct: 95 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 148
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFGL++ V D+ + S+ +G+ + PE M K + KSDI++FGV++ E
Sbjct: 149 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 204
Query: 194 LIT 196
+ +
Sbjct: 205 IYS 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 29 NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP 88
+ G Q Q +L + L H ++V L+G C G LV +Y+P+GSL DH+
Sbjct: 52 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG 110
Query: 89 DQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGL 145
P L+W ++ A+G+ YL +++R+L + N+LL + +++DFG+
Sbjct: 111 ALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGV 161
Query: 146 AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
A L P D + + + A E GK T +SD++S+GV + EL+T
Sbjct: 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 29 NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP 88
+ G Q Q +L + L H ++V L+G C G LV +Y+P+GSL DH+
Sbjct: 70 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG 128
Query: 89 DQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGL 145
P L+W ++ A+G+ YL +++R+L + N+LL + +++DFG+
Sbjct: 129 ALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 146 AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
A L P D + + + A E GK T +SD++S+GV + EL+T
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLED 81
VA+K + ++ Q F+ E +++ L H NLV L+G L +V EYM GSL D
Sbjct: 47 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L + L + +K ++ +EYL ++RDL + N+L+ D K+S
Sbjct: 105 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVS 159
Query: 142 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL K ST+ G + APE K + KSD++SFG++L E+ +
Sbjct: 160 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 114 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 163
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 164 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 224 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 264
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 265 CWHPKAEMRPSFSELVSRISAIFS 288
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLED 81
VA+K + ++ Q F+ E +++ L H NLV L+G L +V EYM GSL D
Sbjct: 32 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L + L + +K ++ +EYL ++RDL + N+L+ D K+S
Sbjct: 90 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVS 144
Query: 142 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL K ST+ G + APE K + KSD++SFG++L E+ +
Sbjct: 145 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 122 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 171
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 232 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 273 CWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 117 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 166
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 167 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 227 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 267
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 268 CWHPKAEMRPSFSELVSRISAIFS 291
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLED 81
VA+K + ++ Q F+ E +++ L H NLV L+G L +V EYM GSL D
Sbjct: 219 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L + L + +K ++ +EYL ++RDL + N+L+ D K+S
Sbjct: 277 YLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 331
Query: 142 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL K ST+ G + APE K + KSD++SFG++L E+ +
Sbjct: 332 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 141 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 190
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 191 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 251 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 291
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 292 CWHPKAEMRPSFSELVSRISAIFS 315
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 120 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 169
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 170 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 230 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 270
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 271 CWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 121 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 170
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 171 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 231 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 271
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 272 CWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 140 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 189
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 190 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 250 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 290
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 291 CWHPKAEMRPSFSELVSRISAIFS 314
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 122 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 171
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 232 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 273 CWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 82 HLYDLEPDQ------EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 164
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 165 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 224
Query: 196 T 196
T
Sbjct: 225 T 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 24 AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLED 81
A+K LN G +F+ E +++ H N+++L+G C S L+V YM G L +
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 82 HLYDLEPDQEPLSWNTRMKIAVG----AARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
+ + + N +K +G A+G++YL A+ ++RDL + N +LD F
Sbjct: 119 FIRNE-------THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFT 168
Query: 138 PKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K++DFGLA+ + H T + A E + K T KSD++SFGV+L EL+
Sbjct: 169 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYAVAVTAM 252
T R A P D F + LL GR P C + V
Sbjct: 229 T-RGA-----------------PPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLK 269
Query: 253 CLNEEANFRPLINDIVVALDYLVS 276
C + +A RP +++V + + S
Sbjct: 270 CWHPKAEMRPSFSELVSRISAIFS 293
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK +N ++ EF+ E ++ + ++V L+G + G L++ E M G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 82 HLYDLEPDQ------EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+L L P P S + +++A A G+ YL+ ++RDL + N ++ D
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
F K+ DFG+ + D + + + +PE G T SD++SFGVVL E+
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 196 T 196
T
Sbjct: 235 T 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 81 DHLY-----DLEP-DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
+ L DL+ D PL + + A+G+ +L A+ I+RD+ + N+LL N
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 187
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFGLA+ N V + APE T++SD++S+G++L E+
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 195 IT 196
+
Sbjct: 248 FS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 81 DHLY-----DLEP-DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
+ L DL+ D PL + + A+G+ +L A+ I+RD+ + N+LL N
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 195
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFGLA+ N V + APE T++SD++S+G++L E+
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 195 IT 196
+
Sbjct: 256 FS 257
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++TL+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V E M GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + +E ++ L M L H+N+V L+G CT L++EY G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 81 DHL-------------------YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
++L + E D L++ + A A+G+E+L K+ +
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CV 194
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
+RDL + N+L+ + K+ DFGLA+ N V + APE G T+K
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 182 SDIYSFGVVLLELIT 196
SD++S+G++L E+ +
Sbjct: 255 SDVWSYGILLWEIFS 269
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V E M GSL+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 107 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 161 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 214
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 215 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 261
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 262 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIVE--VLMLSLLHHDNLVTLIGYCTSGDQR-------- 67
L ++ VA+K + Q FI E + + L+ HDN+ I GD+R
Sbjct: 34 LDERPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFI----VGDERVTADGRME 86
Query: 68 -LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA------NPPV 120
LLV EY P GSL +L D W + ++A RGL YLH + P +
Sbjct: 87 YLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLA------KLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+RDL S N+L+ ND +SDFGL+ +L G+ + + +GT Y APE +
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VL 200
Query: 175 SGKLTLKS--------DIYSFGVVLLELITGRKAMDLSKGQG 208
G + L+ D+Y+ G++ E+ + DL G+
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIFM--RCTDLFPGES 240
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLED 81
VA+K + ++ Q F+ E +++ L H NLV L+G L +V EYM GSL D
Sbjct: 38 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L + L + +K ++ +EYL ++RDL + N+L+ D K+S
Sbjct: 96 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 150
Query: 142 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL K ST+ G + APE + KSD++SFG++L E+ +
Sbjct: 151 DFGLTKEAS-------STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 47 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 106
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 107 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 158
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 159 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 216
Query: 193 ELITG 197
E++ G
Sbjct: 217 EMVDG 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 49 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 108
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 109 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 160
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 161 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 218
Query: 193 ELITG 197
E++ G
Sbjct: 219 EMVDG 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 38 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 97
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 98 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 149
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 150 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207
Query: 193 ELITG 197
E++ G
Sbjct: 208 EMVDG 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ +V + +CAPE + + SD + FGV L E+ T
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 42 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 101
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 102 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 153
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 154 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 211
Query: 193 ELITG 197
E++ G
Sbjct: 212 EMVDG 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V E M GSL+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L + + ++ G A G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + +PE K T SD++S+G+VL E+
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV---- 243
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
+S G+ RP+ + + + VD P C + C ++
Sbjct: 244 ----MSYGE---------RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 258 ANFRPLINDIVVALDYLVSQRDSHPVSRNAGAR 290
N RP IV LD L+ S + +A AR
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ +V + +CAPE + + SD + FGV L E+ T
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 102 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 155
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ +V + +CAPE + + SD + FGV L E+ T
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 169 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 229 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 280
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 281 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 338
Query: 193 ELITG 197
E++ G
Sbjct: 339 EMVDG 343
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 102 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 155
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ +V + +CAPE + + SD + FGV L E+ T
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 13 VGLVWLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
+ V +LVA+K+++ Q + EV+++ H+N+V + GD+ +V E
Sbjct: 92 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
++ G+L D + ++E ++ + + + L LH + VI+RD+KS +ILL
Sbjct: 152 FLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILL 203
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
+D KLSDFG V ++GT + APE + DI+S G++++
Sbjct: 204 THDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 261
Query: 193 ELITG 197
E++ G
Sbjct: 262 EMVDG 266
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+++ +K+L + + F+ EV ++ L H N++ IG + + EY+ G+L
Sbjct: 36 EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
+ ++ Q P W+ R+ A A G+ YLH +I+RDL S N L+ + N +
Sbjct: 96 GIIKSMD-SQYP--WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVV 149
Query: 141 SDFGLAKL------GPVG------DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
+DFGLA+L P G + V+G + APE K D++SFG
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209
Query: 189 VVLLELITGRKAMD 202
+VL E+I GR D
Sbjct: 210 IVLCEII-GRVNAD 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 19 CDQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCT--SGDQRLLVYEY 73
+Q AIK L + + + +VE +LSL +T + +CT + + V EY
Sbjct: 42 TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM-FCTFQTKENLFFVMEY 100
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
+ G L H+ + A GL++LH K ++YRDLK NILLD
Sbjct: 101 LNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD 153
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
D + K++DFG+ K +GD + GT Y APE + K D +SFGV+L E
Sbjct: 154 KDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 194 LITGRKAMDLSKGQGEQNLV 213
++ G+ GQ E+ L
Sbjct: 212 MLIGQSPF---HGQDEEELF 228
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 108 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 161
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ +V + +CAPE + + SD + FGV L E+ T
Sbjct: 162 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTAR 173
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 234 VLMWEIFT 241
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 23 VAIKQL---NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VAIK + E + + F EV S L H N+V++I D LV EY+ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
+++ PLS +T + G+++ H + +++RD+K NIL+D++ K
Sbjct: 99 SEYI----ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLK 151
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+ DFG+AK T + V+GT Y +PE A +DIYS G+VL E++ G
Sbjct: 152 IFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 22 LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+VA+K L E Q +F E +++ + N+V L+G C G L++EYM G L
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 81 DHLYDLEPDQ--------------------EPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
+ L + P PLS ++ IA A G+ YL +
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---F 195
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL 180
++RDL + N L+ + K++DFGL++ D + PE + T
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 181 KSDIYSFGVVLLELIT 196
+SD++++GVVL E+ +
Sbjct: 256 ESDVWAYGVVLWEIFS 271
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 19 CDQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCT--SGDQRLLVYEY 73
+Q AIK L + + + +VE +LSL +T + +CT + + V EY
Sbjct: 41 TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM-FCTFQTKENLFFVMEY 99
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
+ G L H+ + A GL++LH K ++YRDLK NILLD
Sbjct: 100 LNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD 152
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
D + K++DFG+ K +GD + GT Y APE + K D +SFGV+L E
Sbjct: 153 KDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 194 LITGRKAMDLSKGQGEQNL 212
++ G+ GQ E+ L
Sbjct: 211 MLIGQSPF---HGQDEEEL 226
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 81 DHL---------YDLEPDQEP---LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+ L Y P P LS + + A+G+ +L A+ I+RD+ +
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 195
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+LL N K+ DFGLA+ N V + APE T++SD++S+G
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 189 VVLLELIT 196
++L E+ +
Sbjct: 256 ILLWEIFS 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 175
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 236 VLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 178
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 239 VLMWEIFT 246
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 232
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 293 VLMWEIFT 300
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 23 VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + +F+ E ++ H N++ L G T ++V EYM GSL+
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L+ + + + + G + G++YL ++ ++RDL + NIL++++ K+S
Sbjct: 113 F---LKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 166
Query: 142 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
DFGL+++ + D+ + G + APE K T SD++S+G+V+ E+++
Sbjct: 167 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-- 222
Query: 199 KAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE 257
GE RP+ + + + V+ P C + C +E
Sbjct: 223 --------YGE-------RPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKE 267
Query: 258 ANFRPLINDIVVALDYLV 275
N RP ++IV LD L+
Sbjct: 268 RNSRPKFDEIVNMLDKLI 285
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK LN G + + EF+ E L+++ + H +LV L+G C S +L V + MP G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 128
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++++ + + Q L+W V A+G+ YL + +++RDL + N+L+ + +
Sbjct: 129 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHV 179
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLA+L + + + + A E K T +SD++S+GV + EL+T G
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 239
Query: 198 RKAMD 202
K D
Sbjct: 240 GKPYD 244
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK LN G + + EF+ E L+++ + H +LV L+G C S +L V + MP G L +
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++++ + + Q L+W V A+G+ YL + +++RDL + N+L+ + +
Sbjct: 106 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLA+L + + + + A E K T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 GKPYD 221
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ V + +CAPE + + SD + FGV L E+ T
Sbjct: 152 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
AIK++ + H++F E+ +L L HH N++ L+G C L EY P G+L
Sbjct: 55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114
Query: 81 DHLYD---LEPD---------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
D L LE D LS + A ARG++YL K I+RDL +
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAAR 171
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYS 186
NIL+ ++ K++DFGL++ G +V + MG + A E T SD++S
Sbjct: 172 NILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWS 226
Query: 187 FGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLN 244
+GV+L E+++ G ++ + + L R L PL C +
Sbjct: 227 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-----------LEKPL-------NCDD 268
Query: 245 YAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C E+ RP I+V+L+ ++ +R ++
Sbjct: 269 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 305
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
AIK++ + H++F E+ +L L HH N++ L+G C L EY P G+L
Sbjct: 45 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 104
Query: 81 DHLYD---LEPD---------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
D L LE D LS + A ARG++YL K I+RDL +
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAAR 161
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYS 186
NIL+ ++ K++DFGL++ G +V + MG + A E T SD++S
Sbjct: 162 NILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWS 216
Query: 187 FGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLN 244
+GV+L E+++ G ++ + + L R L PL C +
Sbjct: 217 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-----------LEKPL-------NCDD 258
Query: 245 YAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C E+ RP I+V+L+ ++ +R ++
Sbjct: 259 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 295
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 23 VAIKQLNHEGL---QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VA+K L + L + +FI EV + L H NL+ L G + ++ V E P+GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
D L Q T + AV A G+ YL K I+RDL + N+LL K
Sbjct: 108 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 161
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGT-YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ DFGL + P D+ V + +CAPE + + SD + FGV L E+ T
Sbjct: 162 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 32/266 (12%)
Query: 22 LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK L + + +F+ E ++ H N++ L G T +++ E+M GSL+
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + + + + G A G++YL A+ ++RDL + NIL++++ K+
Sbjct: 123 SF---LRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKV 176
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
SDFGL++ + D+T T G + APE K T SD++S+G+V+ E+
Sbjct: 177 SDFGLSRF--LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV- 233
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+S G+ RP+ + ++ ++ P C + + C
Sbjct: 234 -------MSYGE---------RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW 277
Query: 255 NEEANFRPLINDIVVALDYLVSQRDS 280
++ N RP IV LD ++ +S
Sbjct: 278 QKDRNHRPKFGQIVNTLDKMIRNPNS 303
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 81 DHLYDLEP------------DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + +++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
Q+VAIKQ+ E QE I E+ ++ ++V G +V EY GS+
Sbjct: 55 QIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
D + + L+ + I +GLEYLH I+RD+K+ NILL+ + + KL
Sbjct: 113 DII---RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKL 166
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+DFG+A G + D V+GT + APE +DI+S G+ +E+ G+
Sbjct: 167 ADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
D VAIK L G Q +F+ E ++ H N++ L G T G ++V EYM G
Sbjct: 77 DVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL+ L + Q + M VGA G+ YL ++ ++RDL + N+L+D++
Sbjct: 136 SLDTFLRTHD-GQFTIMQLVGMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLV 189
Query: 138 PKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
K+SDFGL++ L D + +T + APE + SD++SFGVV+ E+
Sbjct: 190 CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV-- 247
Query: 197 GRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN 255
L+ G+ RP+ + + V+ P C + + C +
Sbjct: 248 ------LAYGE---------RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWH 292
Query: 256 EEANFRPLINDIVVALDYLVSQRDS 280
++ RP + IV LD L+ +S
Sbjct: 293 KDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 17 WLCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
W VA+K + EG EF E + L H LV G C+ +V EY+
Sbjct: 29 WKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L ++L EP + +++ G+ +L + I+RDL + N L+D D
Sbjct: 88 GCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDL 141
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K+SDFG+ + V D+ +VS+ +GT + APE K + KSD+++FG+++ E
Sbjct: 142 CVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197
Query: 194 LIT-GRKAMDL 203
+ + G+ DL
Sbjct: 198 VFSLGKMPYDL 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
AIK++ + H++F E+ +L L HH N++ L+G C L EY P G+L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 81 DHLYD---LEPD---------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
D L LE D LS + A ARG++YL K I+R+L +
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAAR 168
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLTLKSDIYS 186
NIL+ ++ K++DFGL++ G +V + MG + A E T SD++S
Sbjct: 169 NILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWS 223
Query: 187 FGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLN 244
+GV+L E+++ G ++ + + L R L PL C +
Sbjct: 224 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-----------LEKPL-------NCDD 265
Query: 245 YAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C E+ RP I+V+L+ ++ +R ++
Sbjct: 266 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 302
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 32/267 (11%)
Query: 20 DQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
D VAIK L G Q +F+ E ++ H N++ L G T G ++V EYM G
Sbjct: 77 DVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SL+ L + Q + M VGA G+ YL ++ ++RDL + N+L+D++
Sbjct: 136 SLDTFLRTHD-GQFTIMQLVGMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLV 189
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+SDFGL+++ + D+ + G + APE + SD++SFGVV+ E+
Sbjct: 190 CKVSDFGLSRV--LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 195 ITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC 253
L+ G+ RP+ + + V+ P C + + C
Sbjct: 248 --------LAYGE---------RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290
Query: 254 LNEEANFRPLINDIVVALDYLVSQRDS 280
+++ RP + IV LD L+ +S
Sbjct: 291 WHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q+ LS + RGL+Y+H AN V++RDLK +N+L++ + K+
Sbjct: 131 DLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLINTTCDLKIC 186
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 187 DFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 81 DHLYD----LEPD------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ L LE D LS + + A+G+ +L A+ I+RD+ + N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
LL N K+ DFGLA+ N V + APE T++SD++S+G++
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 191 LLELIT 196
L E+ +
Sbjct: 256 LWEIFS 261
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 81 DHLYDLEPD------------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++ EY+ GS D L EP PL I +GL+YLH + I+RD+K+A
Sbjct: 102 IIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 153
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+LL KL+DFG+A G + D +GT + APE K+DI+S G
Sbjct: 154 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 211
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA 248
+ +EL G L+ + P P L G Y + + A
Sbjct: 212 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 258
Query: 249 VTAMCLNEEANFRPLINDIV 268
CLN+E +FRP +++
Sbjct: 259 ----CLNKEPSFRPTAKELL 274
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
+F+ E +L H N+V LIG CT Q+ +Y M + D L L + L T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ AA G+EYL K I+RDL + N L+ K+SDFG+++ G
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ APE G+ + +SD++SFG++L E +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++ EY+ GS D L EP PL I +GL+YLH + I+RD+K+A
Sbjct: 82 IIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+LL KL+DFG+A G + D +GT + APE K+DI+S G
Sbjct: 134 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA 248
+ +EL G L+ + P P L G Y + + A
Sbjct: 192 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 238
Query: 249 VTAMCLNEEANFRPLINDIV 268
CLN+E +FRP +++
Sbjct: 239 ----CLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++ EY+ GS D L EP PL I +GL+YLH + I+RD+K+A
Sbjct: 82 IIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+LL KL+DFG+A G + D +GT + APE K+DI+S G
Sbjct: 134 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA 248
+ +EL G L+ + P P L G Y + + A
Sbjct: 192 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 238
Query: 249 VTAMCLNEEANFRPLINDIV 268
CLN+E +FRP +++
Sbjct: 239 ----CLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++ EY+ GS D L EP PL I +GL+YLH + I+RD+K+A
Sbjct: 97 IIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 148
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+LL KL+DFG+A G + D +GT + APE K+DI+S G
Sbjct: 149 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 206
Query: 189 VVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA 248
+ +EL G L+ + P P L G Y + + A
Sbjct: 207 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 253
Query: 249 VTAMCLNEEANFRPLINDIV 268
CLN+E +FRP +++
Sbjct: 254 ----CLNKEPSFRPTAKELL 269
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 81 DHLY---------DLEPDQE----------PLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
+ L L P Q+ PL + + A+G+ +L A+ I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCI 180
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
+RD+ + N+LL N K+ DFGLA+ N V + APE T++
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 182 SDIYSFGVVLLELIT 196
SD++S+G++L E+ +
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L + + + + E+ M+ ++ H N++ L+G CT ++ Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 81 DHLYDLEPD------------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
++L P +E +++ + ARG+EYL A+ I+RDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
N+L+ + K++DFGLA+ D +T + APE T +SD++SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 189 VVLLELIT 196
V++ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW-- 215
++ GT Y APE + + D++S G+VL ++ G D Q W
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD-QPSDSXQEYSDWKE 222
Query: 216 SRPFLKDQKKFVHLVDPLLH 235
+ +L KK LLH
Sbjct: 223 KKTYLNPWKKIDSAPLALLH 242
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 111 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIX 166
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
+F+ E +L H N+V LIG CT Q+ +Y M + D L L + L T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ AA G+EYL K I+RDL + N L+ K+SDFG+++ G
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ APE G+ + +SD++SFG++L E +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV ++ +L+H N+V L + LV E
Sbjct: 38 LTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVME 94
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLK 126
Y G + D+L + RMK A+ ++Y H K +++RDLK
Sbjct: 95 YASGGEVFDYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLK 141
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIY 185
+ N+LLD D N K++DFG + VG+ G+ Y APE K + D++
Sbjct: 142 AENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 198
Query: 186 SFGVVLLELITGRKAMD 202
S GV+L L++G D
Sbjct: 199 SLGVILYTLVSGSLPFD 215
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 111 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIC 166
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 20 DQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
D VAIK L + + +F+ E ++ H N+V L G T G ++V E+M G+
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L+ L + + ++ G A G+ YL A+ ++RDL + NIL++++
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVC 184
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+SDFGL+++ + D+ G + APE K T SD++S+G+V+ E++
Sbjct: 185 KVSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
Query: 196 T 196
+
Sbjct: 243 S 243
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
VA+K ++ Q + EV+++ H N+V + G++ ++ E++ G+L D
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
+ + ++E ++ + + L YLH + VI+RD+KS +ILL D KLSD
Sbjct: 133 VSQVRLNEEQIA-----TVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSD 184
Query: 143 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA-M 201
FG + + ++GT + APE + DI+S G++++E++ G
Sbjct: 185 FGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242
Query: 202 DLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 235
S Q + L P LK+ H V P+L
Sbjct: 243 SDSPVQAMKRLRDSPPPKLKNS----HKVSPVLR 272
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 111
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 112 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 111 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIC 166
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 22 LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK L + + +F+ E ++ H N++ L G T +++ E+M GSL+
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + + + + G A G++YL A+ ++R L + NIL++++ K+
Sbjct: 97 SF---LRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKV 150
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
SDFGL++ + D+T T G + APE K T SD++S+G+V+ E+
Sbjct: 151 SDFGLSRF--LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV- 207
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+S G+ RP+ + ++ ++ P C + + C
Sbjct: 208 -------MSYGE---------RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW 251
Query: 255 NEEANFRPLINDIVVALDYLVSQRDS 280
++ N RP IV LD ++ +S
Sbjct: 252 QKDRNHRPKFGQIVNTLDKMIRNPNS 277
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 113 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 168
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 21 QLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
++VAIK++++ G Q + Q+ I EV L L H N + G LV EY +G
Sbjct: 80 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LG 138
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
S D L E ++PL + GA +GL YLH +I+RD+K+ NILL
Sbjct: 139 SASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGL 192
Query: 138 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLEL 194
KL DFG A + + +GT + APE ++ G+ K D++S G+ +EL
Sbjct: 193 VKLGDFGSASI------MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 111 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 166
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 23 VAIK--QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR-----LLVYEYMP 75
VA+K +L++ + +EF+ E + H N++ L+G C + +++ +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 76 MGSLEDHLY--DLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L +L LE + + T +K V A G+EYL +N ++RDL + N +L
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLR 181
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
+D ++DFGL+K GD + A E T KSD+++FGV + E
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE 241
Query: 194 LITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG---RYPRRCLNYAVAVT 250
+ T ++ G QN + D LLHG + P CL+ +
Sbjct: 242 IAT----RGMTPYPGVQNH---------------EMYDYLLHGHRLKQPEDCLDELYEIM 282
Query: 251 AMCLNEEANFRPLINDIVVALDYLVS 276
C + RP + + + L+ L+
Sbjct: 283 YSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 113 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTSDLKIC 168
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + ++L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 111
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 112 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 21 QLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
++VAIK++++ G Q + Q+ I EV L L H N + G LV EY +G
Sbjct: 41 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LG 99
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
S D L E ++PL + GA +GL YLH +I+RD+K+ NILL
Sbjct: 100 SASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGL 153
Query: 138 PKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLE 193
KL DFG A + P + +GT + APE ++ G+ K D++S G+ +E
Sbjct: 154 VKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 194 L 194
L
Sbjct: 207 L 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 29/280 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
+ VAIK L + + EF+ E ++ H N++ L G T+ +++ E+M G+
Sbjct: 44 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 103
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L D L Q + + + G A G+ YL A ++RDL + NIL++++
Sbjct: 104 L-DSFLRLNDGQ--FTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVC 157
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+SDFGL++ + T +G + APE K T SD +S+G+V+ E+
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV- 216
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+S G+ RP+ + ++ ++ P C + C
Sbjct: 217 -------MSFGE---------RPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCW 260
Query: 255 NEEANFRPLINDIVVALDYLVSQRDS-HPVSRNAGARGVP 293
++ N RP +V ALD ++ S V+R G P
Sbjct: 261 QKDRNARPRFPQVVSALDKMIRNPASLKIVARENGGASHP 300
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 109 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 164
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 116 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 171
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 117 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 172
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 108 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 163
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 113 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 168
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 28 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 87
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 88 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 137
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 198 AMLAGELPWD 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 131 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 186
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 109 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 164
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 89 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 138
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 199 AMLAGELPWD 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 24 AIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
AIK L+ +Q + F+ E L++ L+H N++ LIG + L + +P D
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG--LPHVLLPYMCHGDL 110
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L + Q + + + ARG+EYL A ++RDL + N +LD F K++D
Sbjct: 111 LQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVAD 167
Query: 143 FGLAKLGPVGDNTHVSTR----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
FGLA+ + D + S + + A E + + T KSD++SFGV+L EL+T
Sbjct: 168 FGLAR--DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 111
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 112 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVL--MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L +E ++ L M L H+N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 81 DHLYD----LEPD------QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ L LE D S + + A+G+ +L A+ I+RD+ + N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
LL N K+ DFGLA+ N V + APE T++SD++S+G++
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 191 LLELIT 196
L E+ +
Sbjct: 256 LWEIFS 261
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 110
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 111 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 119 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 174
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 111 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 166
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTR 98
E+ + +L+H+N+V G+ G+ + L EY G L D + EPD EP +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFF 111
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
++ G YLH + +RD+K N+LLD N K+SDFGLA + + +
Sbjct: 112 HQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMD 202
++ GT Y APE + + D++S G+VL ++ G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 46 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 104 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 154
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T +S GT Y PE K D++S GV+ E + G+ + +
Sbjct: 155 WSCHAPSSRRTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 211 TYQETYKRIS 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 90 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 139
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 200 AMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 90 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 139
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 200 AMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 90 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 139
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 200 AMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 90 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 139
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 200 AMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 18 LCDQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ ++ VA+K ++ + + E+ + +L+H+N+V G+ G+ + L EY
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 77 GSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
G L D + EPD EP + ++ G YLH + +RD+K N+LLD
Sbjct: 89 GELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLD 138
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLL 192
N K+SDFGLA + + + ++ GT Y APE + + D++S G+VL
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 193 ELITGRKAMD 202
++ G D
Sbjct: 199 AMLAGELPWD 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
+ VAIK L + + EF+ E ++ H N++ L G T+ +++ E+M G+
Sbjct: 42 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 101
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L D L Q + + + G A G+ YL A ++RDL + NIL++++
Sbjct: 102 L-DSFLRLNDGQ--FTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVC 155
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+SDFGL++ + T +G + APE K T SD +S+G+V+ E+
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV- 214
Query: 196 TGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 254
+S G+ RP+ + ++ ++ P C + C
Sbjct: 215 -------MSFGE---------RPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCW 258
Query: 255 NEEANFRPLINDIVVALDYLV 275
++ N RP +V ALD ++
Sbjct: 259 QKDRNARPRFPQVVSALDKMI 279
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L LHH N+V+LI S LV+E+M E L + + + ++++
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQI 121
Query: 100 KIAV-GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG--PVGDNTH 156
KI + RG+ + H +++RDLK N+L+++D KL+DFGLA+ PV TH
Sbjct: 122 KIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 157 VSTRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
T Y AP+ M S K + DI+S G + E+ITG+
Sbjct: 179 EVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L LHH N+V+LI S LV+E+M E L + + + ++++
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQI 121
Query: 100 KIAV-GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LG-PVGDNTH 156
KI + RG+ + H +++RDLK N+L+++D KL+DFGLA+ G PV TH
Sbjct: 122 KIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 157 VSTRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
T Y AP+ M S K + DI+S G + E+ITG+
Sbjct: 179 EVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VAIK QLN LQ + EV ++ +L+H N+V L + L+ E
Sbjct: 35 LTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 91
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
Y G + D+L +E + ++ + V A ++Y H K +++RDLK+ N+LL
Sbjct: 92 YASGGEVFDYLVAHGRMKEKEA-RSKFRQIVSA---VQYCHQKR---IVHRDLKAENLLL 144
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVL 191
D D N K++DFG + VG G+ Y APE K + D++S GV+L
Sbjct: 145 DADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 192 LELITGRKAMD 202
L++G D
Sbjct: 202 YTLVSGSLPFD 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAI++++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 21 QLVAIKQLNHEGL-----QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
Q VA+K +N + L QG E E+ L LL H +++ L S D+ ++V EY
Sbjct: 30 QKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 86
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+ L+D ++ +S + +EY H +++RDLK N+LLD
Sbjct: 87 ----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 139
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
N K++DFGL+ + G+ S G+ Y APE +SGKL + D++S GV+L
Sbjct: 140 LNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYV 195
Query: 194 LITGRKAMD 202
++ R D
Sbjct: 196 MLCRRLPFD 204
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKCQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRTELC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 31/197 (15%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV ++ +L+H N+V L + LV E
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLK 126
Y G + D+L + RMK A+ ++Y H K +++RDLK
Sbjct: 94 YASGGEVFDYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLK 140
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIY 185
+ N+LLD D N K++DFG + G+ G+ Y APE K + D++
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 186 SFGVVLLELITGRKAMD 202
S GV+L L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 50 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 108 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 159 WSVHAP----SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 215 TYQETYKRIS 224
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 31/197 (15%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV ++ +L+H N+V L + LV E
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLK 126
Y G + D+L + RMK A+ ++Y H K +++RDLK
Sbjct: 94 YASGGEVFDYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLK 140
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIY 185
+ N+LLD D N K++DFG + G+ G+ Y APE K + D++
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 186 SFGVVLLELITGRKAMD 202
S GV+L L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 21 QLVAIKQLNHEGL-----QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
Q VA+K +N + L QG E E+ L LL H +++ L S D+ ++V EY
Sbjct: 39 QKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG 96
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+ L+D ++ +S + +EY H +++RDLK N+LLD
Sbjct: 97 -----NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 148
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
N K++DFGL+ + G+ S G+ Y APE +SGKL + D++S GV+L
Sbjct: 149 LNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYV 204
Query: 194 LITGRKAMD 202
++ R D
Sbjct: 205 MLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 21 QLVAIKQLNHEGL-----QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
Q VA+K +N + L QG E E+ L LL H +++ L S D+ ++V EY
Sbjct: 40 QKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG 97
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+ L+D ++ +S + +EY H +++RDLK N+LLD
Sbjct: 98 -----NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 149
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
N K++DFGL+ + G+ S G+ Y APE +SGKL + D++S GV+L
Sbjct: 150 LNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYV 205
Query: 194 LITGRKAMD 202
++ R D
Sbjct: 206 MLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 21 QLVAIKQLNHEGL-----QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
Q VA+K +N + L QG E E+ L LL H +++ L S D+ ++V EY
Sbjct: 34 QKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 90
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+ L+D ++ +S + +EY H +++RDLK N+LLD
Sbjct: 91 ----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 143
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
N K++DFGL+ + G+ S G+ Y APE +SGKL + D++S GV+L
Sbjct: 144 LNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYV 199
Query: 194 LITGRKAMD 202
++ R D
Sbjct: 200 MLCRRLPFD 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+++ QLN LQ + EV ++ +L+H N+V L + LV EY G +
Sbjct: 45 RIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLKSANILLDN 134
D+L + RMK A+ ++Y H K +++RDLK+ N+LLD
Sbjct: 102 DYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDA 148
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVLLE 193
D N K++DFG + G+ G+ Y APE K + D++S GV+L
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 194 LITGRKAMD 202
L++G D
Sbjct: 206 LVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VAIK QLN LQ + EV ++ +L+H N+V L + L+ E
Sbjct: 38 LTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
Y G + D+L +E + ++ + V A ++Y H K +++RDLK+ N+LL
Sbjct: 95 YASGGEVFDYLVAHGRMKEKEA-RSKFRQIVSA---VQYCHQKR---IVHRDLKAENLLL 147
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVL 191
D D N K++DFG + VG G Y APE K + D++S GV+L
Sbjct: 148 DADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 192 LELITGRKAMD 202
L++G D
Sbjct: 205 YTLVSGSLPFD 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ +L D ++ + P++ +++ A + L + H +I+RD+K A
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 129 NILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NIL+ K+ DFG+A+ + G++ + V+GT Y +PE A + +SD+YS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 188 GVVLLELITG 197
G VL E++TG
Sbjct: 206 GCVLYEVLTG 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+++ QLN LQ + EV ++ +L+H N+V L + LV EY G +
Sbjct: 45 RIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLKSANILLDN 134
D+L + RMK A+ ++Y H K +++RDLK+ N+LLD
Sbjct: 102 DYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDA 148
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVLLE 193
D N K++DFG + G+ G+ Y APE K + D++S GV+L
Sbjct: 149 DMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 194 LITGRKAMD 202
L++G D
Sbjct: 206 LVSGSLPFD 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 46 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 104 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 154
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 155 WSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 211 TYQETYKRIS 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 50 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 108 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 159 WSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 215 TYQETYKRIS 224
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 50 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 108 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 159 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 215 TYQETYKRIS 224
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 42 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 99
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 100 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 150
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 151 WSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 207 TYQETYKRIS 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 71 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 129 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 180 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 236 TYQETYKRIS 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 44 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 101
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 102 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 152
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 153 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 209 TYQETYKRIS 218
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +LS + G + ++ EY+ GS D L +P PL I
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPG--PLEETYIATI 121
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 161
+GL+YLH + I+RD+K+AN+LL + KL+DFG+A G + D
Sbjct: 122 LREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXF 176
Query: 162 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 221
+GT + APE K+DI+S G+ A++L+KG+ + + R
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGIT---------AIELAKGEPPNSDLHPMRVLFL 227
Query: 222 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 268
K P L G++ + + A CLN++ FRP +++
Sbjct: 228 IPKN----SPPTLEGQHSKPFKEFVEA----CLNKDPRFRPTAKELL 266
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV ++ +L+H N+V L + LV E
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR------GLEYLHCKANPPVIYRDLK 126
Y G + D+L + RMK A+ ++Y H K +++RDLK
Sbjct: 94 YASGGEVFDYLV----------AHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLK 140
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIY 185
+ N+LLD D N K++DFG + G+ G Y APE K + D++
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 186 SFGVVLLELITGRKAMD 202
S GV+L L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 115 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 170
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 116 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTCDLKIC 171
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 39 FIVEVLMLSLLHHDNLVTLIGYCT------SGDQRLLVYEYMPMGSLEDHLYDLEPDQEP 92
F E + L+H +V + Y T +G +V EY+ +L D ++ + P
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGP 112
Query: 93 LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPV 151
++ +++ A + L + H +I+RD+K ANI++ K+ DFG+A+ +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
G++ + V+GT Y +PE A + +SD+YS G VL E++TG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L ++ + E +L ++H +++ L G C+ LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 82 HLYDLE--------------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
L + PD+ L+ + A ++G++YL A ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
+RDL + NIL+ K+SDFGL++ D+ ++ + A E T +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 182 SDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR 241
SD++SFGV+L E++T L P + ++ F +L+ P
Sbjct: 233 SDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLF-NLLKTGHRMERPDN 276
Query: 242 CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQR 278
C + C +E + RP+ DI L+ ++ +R
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 62 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 120 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 170
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 171 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 227 TYQETYKRIS 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L ++ + E +L ++H +++ L G C+ LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 82 HLYDLE--------------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
L + PD+ L+ + A ++G++YL A ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLV 172
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
+RDL + NIL+ K+SDFGL++ D+ ++ + A E T +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 182 SDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR 241
SD++SFGV+L E++T L P + ++ F +L+ P
Sbjct: 233 SDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLF-NLLKTGHRMERPDN 276
Query: 242 CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQR 278
C + C +E + RP+ DI L+ ++ +R
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 49 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 107 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 157
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 158 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 214 TYQETYKRIS 223
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L ++ + E +L ++H +++ L G C+ LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 82 HLYDLE--------------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
L + PD+ L+ + A ++G++YL A ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAMSGKLT 179
+RDL + NIL+ K+SDFGL++ V + R G + A E T
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 180 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP 239
+SD++SFGV+L E++T L P + ++ F +L+ P
Sbjct: 231 TQSDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLF-NLLKTGHRMERP 274
Query: 240 RRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQR 278
C + C +E + RP+ DI L+ ++ +R
Sbjct: 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ +L D ++ + P++ +++ A + L + H +I+RD+K A
Sbjct: 110 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 129 NILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A + +SD+YS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 188 GVVLLELITG 197
G VL E++TG
Sbjct: 223 GCVLYEVLTG 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ +L D ++ + P++ +++ A + L + H +I+RD+K A
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 129 NILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A + +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 188 GVVLLELITG 197
G VL E++TG
Sbjct: 206 GCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ +L D ++ + P++ +++ A + L + H +I+RD+K A
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 129 NILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A + +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 188 GVVLLELITG 197
G VL E++TG
Sbjct: 206 GCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ +L D ++ + P++ +++ A + L + H +I+RD+K A
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 129 NILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A + +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 188 GVVLLELITG 197
G VL E++TG
Sbjct: 206 GCVLYEVLTG 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV ++ +L+H N+V L + LV E
Sbjct: 30 LTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 86
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
Y G + D+L +E + + + V A ++Y H K +++RDLK+ N+LL
Sbjct: 87 YASGGEVFDYLVAHGWMKEKEA-RAKFRQIVSA---VQYCHQKF---IVHRDLKAENLLL 139
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVL 191
D D N K++DFG + G+ G+ Y APE K + D++S GV+L
Sbjct: 140 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 192 LELITGRKAMD 202
L++G D
Sbjct: 197 YTLVSGSLPFD 207
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 18 LCDQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE 72
L + VA+K QLN LQ + EV + +L+H N+V L + LV E
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXE 93
Query: 73 YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
Y G + D+L +E + + + V A ++Y H K +++RDLK+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRXKEKEA-RAKFRQIVSA---VQYCHQKF---IVHRDLKAENLLL 146
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-LKSDIYSFGVVL 191
D D N K++DFG + G+ G Y APE K + D++S GV+L
Sbjct: 147 DADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 192 LELITGRKAMD 202
L++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E +L ++ +V+L + D LV M G L+ H+Y + Q +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFY 291
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 161
A GLE LH + ++YRDLK NILLD+ + ++SD GLA P G + RV
Sbjct: 292 AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 162 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSK 205
GT GY APE + + T D ++ G +L E+I G+ K
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +LS + G G + ++ EY+ GS D L D+ ++ T +K
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA--TMLKE 128
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 161
+ +GL+YLH + I+RD+K+AN+LL + KL+DFG+A G + D
Sbjct: 129 IL---KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTF 180
Query: 162 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 221
+GT + APE K+DI+S G+ +EL G L+ + P
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP--- 237
Query: 222 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 268
P L G + + + A CLN++ +FRP +++
Sbjct: 238 ----------PTLVGDFTKSFKEFIDA----CLNKDPSFRPTAKELL 270
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTR 98
+VE +L+LL +T + C RL V EY+ G L H+ + +EP +
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
+I++G L +LH + +IYRDLK N++LD++ + K++DFG+ K + V+
Sbjct: 127 AEISIG----LFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVT 176
Query: 159 TRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 212
TR GT Y APE D +++GV+L E++ G+ D G+ E L
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD---GEDEDEL 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 17 WLCDQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY 73
+ Q VA+K ++ + L+ H E+ L LL H +++ L T+ ++V EY
Sbjct: 31 YKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
L+D +++ ++ + + +EY H +++RDLK N+LLD
Sbjct: 91 AG-----GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLD 142
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVL 191
++ N K++DFGL+ + G+ S G+ Y APE ++GKL + D++S G+VL
Sbjct: 143 DNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVL 198
Query: 192 LELITGRKAMD 202
++ GR D
Sbjct: 199 YVMLVGRLPFD 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ + EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 49 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 87 E--PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL ++ K++DFG
Sbjct: 107 SRFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFG 157
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ P T + GT Y PE K D++S GV+ E + G
Sbjct: 158 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E +L ++ +V+L + D LV M G L+ H+Y + Q +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFY 291
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 161
A GLE LH + ++YRDLK NILLD+ + ++SD GLA P G + RV
Sbjct: 292 AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 162 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSK 205
GT GY APE + + T D ++ G +L E+I G+ K
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P G + L L
Sbjct: 50 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 108 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 159 WSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 215 TYQETYKRIS 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+++ Q + Q + E+ +L H+N++ + + + Y+ +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
LY L Q LS + RGL+Y+H AN V++RDLK +N+LL+ + K+
Sbjct: 131 DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKIC 186
Query: 142 DFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
DFGLA++ P D+T T + T Y APE ++ K KS DI+S G +L E+++ R
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 12 NVGLVWLCDQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL 68
VG L VA+K LN + ++ + E+ L L H +++ L ++
Sbjct: 33 KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF 92
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ G L D++ L ++ G++Y H V++RDLK
Sbjct: 93 MVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPE 145
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYS 186
N+LLD N K++DFGL+ + G+ S G+ Y APE +SG+L + DI+S
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLYAGPEVDIWS 201
Query: 187 FGVVLLELITGRKAMD 202
GV+L L+ G D
Sbjct: 202 SGVILYALLCGTLPFD 217
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 23 VAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK L G Q +F+ E ++ H N++ L G T +++ EYM GSL+
Sbjct: 60 VAIKTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 118
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + + + + G G++YL ++ ++RDL + NIL++++ K+
Sbjct: 119 AF---LRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKV 172
Query: 141 SDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
SDFG++++ + D+ + G + APE K T SD++S+G+V+ E+++
Sbjct: 173 SDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 47 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K+++FG
Sbjct: 105 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFG 155
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 156 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 212 TYQETYKRIS 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQDTYKRIS 219
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L L + + E+ +LS L +H N+V L+G CT G L++ EY G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 81 DHLYD--------------LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ L +E D+ L + + A+G+ +L A+ I+RDL
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 172
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL + K+ DFGLA+ N V + APE + T +SD++S
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+G+ L EL + L S P + KF ++ P
Sbjct: 233 YGIFLWELFS---------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 277
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C + + RP IV ++ +S+ +H
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K+++FG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P T + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L L + + E+ +LS L +H N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 81 DHLYD--------------LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ L +E D+ L + + A+G+ +L A+ I+RDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 195
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL + K+ DFGLA+ N V + APE + T +SD++S
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+G+ L EL + L S P + KF ++ P
Sbjct: 256 YGIFLWELFS---------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 300
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C + + RP IV ++ +S+ +H
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 335
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 47 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 105 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 155
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 156 WSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 212 TYQETYKRIS 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 45 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 103 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 154 WSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 210 TYQETYKRIS 219
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L L + + E+ +LS L +H N+V L+G CT G L++ EY G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 81 DHLYD--------------LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ L +E D+ L + + A+G+ +L A+ I+RDL
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 188
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL + K+ DFGLA+ N V + APE + T +SD++S
Sbjct: 189 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+G+ L EL + L S P + KF ++ P
Sbjct: 249 YGIFLWELFS---------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 293
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C + + RP IV ++ +S+ +H
Sbjct: 294 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L L + + E+ +LS L +H N+V L+G CT G L++ EY G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 81 DHLYD--------------LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ L +E D+ L + + A+G+ +L A+ I+RDL
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 190
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL + K+ DFGLA+ N V + APE + T +SD++S
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+G+ L EL + L S P + KF ++ P
Sbjct: 251 YGIFLWELFS---------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 295
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C + + RP IV ++ +S+ +H
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 330
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 23 VAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK L G Q +F+ E ++ H N++ L G T +++ EYM GSL+
Sbjct: 45 VAIKTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 103
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + + + + G G++YL ++ ++RDL + NIL++++ K+
Sbjct: 104 AF---LRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKV 157
Query: 141 SDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
SDFG++++ + D+ + G + APE K T SD++S+G+V+ E+++
Sbjct: 158 SDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 23 VAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VA+K L L + + E+ +LS L +H N+V L+G CT G L++ EY G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 81 DHLYD--------------LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ L +E D+ L + + A+G+ +L A+ I+RDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 195
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL + K+ DFGLA+ N V + APE + T +SD++S
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 187 FGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA 246
+G+ L EL + L S P + KF ++ P
Sbjct: 256 YGIFLWELFS---------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 300
Query: 247 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 281
+ C + + RP IV ++ +S+ +H
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 335
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 23 VAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK L G Q +F+ E ++ H N++ L G T +++ EYM GSL+
Sbjct: 39 VAIKTLK-AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 97
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L + + + + G G++YL ++ ++RDL + NIL++++ K+
Sbjct: 98 AF---LRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKV 151
Query: 141 SDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
SDFG++++ + D+ + G + APE K T SD++S+G+V+ E+++
Sbjct: 152 SDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 46 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 104 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 154
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 155 WSVHAP----SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 211 TYQETYKRIS 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 78 SLEDHLY----DLEPDQEP-------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+L +L + P + P L+ + + A+G+E+L A+ I+RDL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYS 186
+ NILL K+ DFGLA+ + + APE T++SD++S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 187 FGVVLLELIT 196
FGV+L E+ +
Sbjct: 236 FGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 78 SLEDHLYDLEPDQEP----------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKS 127
+L +L + P L+ + + A+G+E+L A+ I+RDL +
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 128 ANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSF 187
NILL K+ DFGLA+ + + APE T++SD++SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 188 GVVLLELIT 196
GV+L E+ +
Sbjct: 237 GVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y + P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 272 SFGVLLWEIFS 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIA 102
L +LH N +V G S + + E+M GSL+ L + + E + K++
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG----KVS 120
Query: 103 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 162
+ RGL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +
Sbjct: 121 IAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFV 174
Query: 163 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
GT Y APE +++SDI+S G+ L+EL GR
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 48 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 106 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 157 WSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 213 TYQETYKRIS 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 71 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 129 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 180 WSVHAPSSRRDD----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 236 TYQETYKRIS 245
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P G + L L
Sbjct: 50 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 87 EP--DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL + K++DFG
Sbjct: 108 SKFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
+ P + + GT Y PE K D++S GV+ E + G+ + +
Sbjct: 159 WSVHAP----SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 205 KGQGEQNLVS 214
Q +S
Sbjct: 215 TYQETYKRIS 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 23 VAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
VAIK ++ + + Q EV + L H +++ L Y + LV E G +
Sbjct: 39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM 98
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
+L + +P S N G+ YLH +++RDL +N+LL + N K
Sbjct: 99 NRYLKN---RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIK 152
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRK 199
++DFGLA + H + + GT Y +PE A L+SD++S G + L+ GR
Sbjct: 153 IADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 200 AMDLSKGQGEQNLV 213
D + N V
Sbjct: 211 PFDTDTVKNTLNKV 224
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHLYDLEPDQEP--------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+L +L + P L+ + + A+G+E+L A+ I+RDL + N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
ILL K+ DFGLA+ + + APE T++SD++SFGV
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 190 VLLELIT 196
+L E+ +
Sbjct: 235 LLWEIFS 241
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 61 CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKAN 117
C + RL V EY+ G L H+ P++ ++ + +A L YLH +
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 126
Query: 118 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSG 176
+IYRDLK N+LLD++ + KL+D+G+ K G GD T + GT Y APE
Sbjct: 127 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGE 181
Query: 177 KLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 211
D ++ GV++ E++ GR D+ S +QN
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 61 CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKAN 117
C + RL V EY+ G L H+ P++ ++ + +A L YLH +
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 141
Query: 118 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSG 176
+IYRDLK N+LLD++ + KL+D+G+ K G GD T + GT Y APE
Sbjct: 142 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGE 196
Query: 177 KLTLKSDIYSFGVVLLELITGRKAMDL 203
D ++ GV++ E++ GR D+
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 61 CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKAN 117
C + RL V EY+ G L H+ P++ ++ + +A L YLH +
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 130
Query: 118 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSG 176
+IYRDLK N+LLD++ + KL+D+G+ K G GD T + GT Y APE
Sbjct: 131 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGE 185
Query: 177 KLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 211
D ++ GV++ E++ GR D+ S +QN
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 61 CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKAN 117
C + RL V EY+ G L H+ P++ ++ + +A L YLH +
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 173
Query: 118 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAMSG 176
+IYRDLK N+LLD++ + KL+D+G+ K G GD T + GT Y APE
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGE 228
Query: 177 KLTLKSDIYSFGVVLLELITGRKAMDL 203
D ++ GV++ E++ GR D+
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + +E + E ++ L + +V LIG C + + +LV E G L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHK 98
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L +E + + ++ + G++YL K ++RDL + N+LL N K+S
Sbjct: 99 FLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKIS 152
Query: 142 DFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
DFGL+K LG D+++ + R G + + APE K + +SD++S+GV + E ++ G
Sbjct: 153 DFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 210
Query: 198 RKAMDLSKG 206
+K KG
Sbjct: 211 QKPYKKMKG 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K ++ + + ++++VE+ +L+ H N+V L+ + ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +LE PL+ + + L YLH + +I+RDLK+ NIL D + KL+
Sbjct: 124 VMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 142 DFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAM-----SGKLTLKSDIYSFGVVLLE 193
DFG++ NT R +GT + APE M K+D++S G+ L+E
Sbjct: 178 DFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 194 L 194
+
Sbjct: 233 M 233
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL G++ HQ EV + S L H N++ L GY + L+ EY P+G++ L L
Sbjct: 49 QLEKAGVE-HQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 87 E--PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG 144
+Q ++ T + A L Y H K VI+RD+K N+LL ++ K++DFG
Sbjct: 107 SRFDEQRTATYITEL------ANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFG 157
Query: 145 LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ P + + GT Y PE K D++S GV+ E + G
Sbjct: 158 WSVHAP----SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHLYDLEPDQEP--------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+L +L + P L+ + + A+G+E+L A+ I+RDL + N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
ILL K+ DFGLA+ + + APE T++SD++SFGV
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 190 VLLELIT 196
+L E+ +
Sbjct: 235 LLWEIFS 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 78 SLEDHL---------YDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDL 125
+L +L Y P+ ++ L+ + + A+G+E+L A+ I+RDL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 126 KSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIY 185
+ NILL K+ DFGLA+ + + APE T++SD++
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 186 SFGVVLLELIT 196
SFGV+L E+ +
Sbjct: 237 SFGVLLWEIFS 247
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
A L++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT
Sbjct: 137 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 191
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE T +D +SFGV++ E++TG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
A L++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 190
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE T +D +SFGV++ E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 37 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 96
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 97 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 148
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + T GT Y APE D + GVV+ E++ GR
Sbjct: 149 ITDFGLCKEG-ISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 20 DQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMP 75
D+L A+K L + + + +VE +L+L +T + C RL V EY+
Sbjct: 45 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L H+ + +EP + +IA+G L +L K +IYRDLK N++LD++
Sbjct: 105 GGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSKG---IIYRDLKLDNVMLDSE 157
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
+ K++DFG+ K + D V+T+ GT Y APE D ++FGV+L E+
Sbjct: 158 GHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
Query: 195 ITGRKAMDLSKGQGEQNL 212
+ G+ + G+ E L
Sbjct: 215 LAGQAPFE---GEDEDEL 229
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 94 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + T GT Y APE D + GVV+ E++ GR
Sbjct: 146 ITDFGLCKEG-ISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 20 DQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMP 75
D+L A+K L + + + +VE +L+L +T + C RL V EY+
Sbjct: 366 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L H+ + +EP + +IA+G L +L K +IYRDLK N++LD++
Sbjct: 426 GGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSKG---IIYRDLKLDNVMLDSE 478
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
+ K++DFG+ K + D V+T+ GT Y APE D ++FGV+L E+
Sbjct: 479 GHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535
Query: 195 ITGRKAMDLSKGQGEQNL 212
+ G+ + G+ E L
Sbjct: 536 LAGQAPFE---GEDEDEL 550
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
A L++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 190
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE T +D +SFGV++ E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 13/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 236
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + L+YLH + N V+YRDLK N++LD D + K
Sbjct: 237 FHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIK 289
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + T GT Y APE D + GVV+ E++ GR
Sbjct: 290 ITDFGLCKEG-IKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 94 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + T GT Y APE D + GVV+ E++ GR
Sbjct: 146 ITDFGLCKEG-ISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
+ E +L H L L + D+ V EY G L HL +E + R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRA 253
Query: 100 KI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
+ L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D +
Sbjct: 254 RFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMK 310
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
T GT Y APE D + GVV+ E++ GR
Sbjct: 311 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K ++ + + ++++VE+ +L+ H N+V L+ + ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +LE PL+ + + L YLH + +I+RDLK+ NIL D + KL+
Sbjct: 124 VMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 142 DFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAM-----SGKLTLKSDIYSFGVVLLE 193
DFG++ NT R +GT + APE M K+D++S G+ L+E
Sbjct: 178 DFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 194 L 194
+
Sbjct: 233 M 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K ++ + + ++++VE+ +L+ H N+V L+ + ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +LE PL+ + + L YLH + +I+RDLK+ NIL D + KL+
Sbjct: 124 VMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 142 DFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAM-----SGKLTLKSDIYSFGVVLLE 193
DFG++ NT R +GT + APE M K+D++S G+ L+E
Sbjct: 178 DFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 194 L 194
+
Sbjct: 233 M 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 159
KI + + L H K N +I+RD+K +NILLD N KL DFG++ G + D+ T
Sbjct: 129 KITLATVKALN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKT 183
Query: 160 RVMGTYGYCAPEY----AMSGKLTLKSDIYSFGVVLLELITGR 198
R G Y APE A ++SD++S G+ L EL TGR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 198 RKAMD 202
K D
Sbjct: 224 SKPYD 228
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 115
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 116 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 166
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 226
Query: 198 RKAMD 202
K D
Sbjct: 227 SKPYD 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 99
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 100 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 150
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 198 RKAMD 202
K D
Sbjct: 211 SKPYD 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLD 106
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 107 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 157
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 198 RKAMD 202
K D
Sbjct: 218 SKPYD 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQL-NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + + ++E + E +++ + + L+G C + +L V + MP G L D
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD 107
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
H+ + Q+ L+W ++ A+G+ YL + +++RDL + N+L+ + +
Sbjct: 108 HVRENRGRLGSQDLLNWCMQI------AKGMSYLE---DVRLVHRDLAARNVLVKSPNHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLA+L + + + + + A E + + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 AKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
A GL++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTV 194
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE + +D +S+GV++ E++TG
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 110 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 160
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 198 RKAMD 202
K D
Sbjct: 221 SKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 106
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 107 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 157
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 198 RKAMD 202
K D
Sbjct: 218 SKPYD 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 111
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 112 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 162
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 222
Query: 198 RKAMD 202
K D
Sbjct: 223 SKPYD 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 198 RKAMD 202
K D
Sbjct: 224 SKPYD 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 SKPYD 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 198 RKAMD 202
K D
Sbjct: 220 SKPYD 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 108
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 198 RKAMD 202
K D
Sbjct: 220 SKPYD 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K ++ + + ++++VE+ +L+ H N+V L+ + ++ E+ G+++
Sbjct: 37 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 96
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +LE PL+ + + L YLH + +I+RDLK+ NIL D + KL+
Sbjct: 97 VMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 150
Query: 142 DFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYAM-----SGKLTLKSDIYSFGVVLLEL 194
DFG++ T + R +GT + APE M K+D++S G+ L+E+
Sbjct: 151 DFGVSAKNT---RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 198 RKAMD 202
K D
Sbjct: 220 SKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 198 RKAMD 202
K D
Sbjct: 224 SKPYD 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 SKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 198 RKAMD 202
K D
Sbjct: 220 SKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 131 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 181
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 241
Query: 198 RKAMD 202
K D
Sbjct: 242 SKPYD 246
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 12 NVGLVWLCDQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL 68
+G L VA+K LN + ++ + E+ L L H +++ L ++
Sbjct: 28 KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF 87
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ G L D++ +E + +I ++Y H V++RDLK
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHRHM---VVHRDLKPE 140
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYS 186
N+LLD N K++DFGL+ + G+ S G+ Y APE +SG+L + DI+S
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWS 196
Query: 187 FGVVLLELITGRKAMD 202
GV+L L+ G D
Sbjct: 197 CGVILYALLCGTLPFD 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 32/176 (18%)
Query: 41 VEVLMLSLLHHDNLVTLIGY----CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ LL HDN++ I S Q L+ Y GSL D L ++ L +
Sbjct: 51 TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPH 105
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP- 150
+++AV AA GL +LH + P + +RD KS N+L+ ++ ++D GLA +
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 151 ------VGDNTHVSTRVMGTYGYCAPEYAMSGKLT------LKSDIYSFGVVLLEL 194
+G+N V GT Y APE T +DI++FG+VL E+
Sbjct: 166 GSDYLDIGNNPRV-----GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 21 QLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
+LVAIK + E L+G + + E+ +L + H N+V L SG L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL---LDNDF 136
D + + + + ++ ++YLH + +++RDLK N+L LD D
Sbjct: 104 FDRIVE----KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+SDFGL+K+ G V + GT GY APE + D +S GV+ L+
Sbjct: 157 KIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 197 G 197
G
Sbjct: 214 G 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 21 QLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
+LVAIK + E L+G + + E+ +L + H N+V L SG L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL---LDNDF 136
D + + + + ++ ++YLH + +++RDLK N+L LD D
Sbjct: 104 FDRIVE----KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+SDFGL+K+ G V + GT GY APE + D +S GV+ L+
Sbjct: 157 KIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 197 G 197
G
Sbjct: 214 G 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S L+H N+V IG R ++ E M G L+
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 193
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 295
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 296 CWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK L + +E + E ++ L + +V LIG C + + +LV E G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHK 424
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
L +E + + ++ + G++YL K ++R+L + N+LL N K+S
Sbjct: 425 FLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKIS 478
Query: 142 DFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
DFGL+K LG D+++ + R G + + APE K + +SD++S+GV + E ++ G
Sbjct: 479 DFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 536
Query: 198 RKAMDLSKG 206
+K KG
Sbjct: 537 QKPYKKMKG 545
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLS 94
Q + EV +L L H N+V L V EY G L + +++ L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 95 WNTRMKIAVGAARGLEYLHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG 152
+++ L+ H +++ V++RDLK AN+ LD N KL DFGLA++ +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LN 167
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
+T + +GT Y +PE KSDI+S G +L EL
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 21 QLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
+LVAIK + E L+G + + E+ +L + H N+V L SG L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL---LDNDF 136
D + + + + ++ ++YLH + +++RDLK N+L LD D
Sbjct: 104 FDRIVE----KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+SDFGL+K+ G V + GT GY APE + D +S GV+ L+
Sbjct: 157 KIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 197 G 197
G
Sbjct: 214 G 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLS 94
Q + EV +L L H N+V L V EY G L + +++ L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 95 WNTRMKIAVGAARGLEYLHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG 152
+++ L+ H +++ V++RDLK AN+ LD N KL DFGLA++ +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LN 167
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
+T + +GT Y +PE KSDI+S G +L EL
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 105/266 (39%), Gaps = 30/266 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S L+H N+V IG R ++ E M G L+
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD---ND 135
L + P L+ + +A A G +YL I+RD+ + N LL
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 196 TGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC 253
+ SK E + + S R +DP P+ C + C
Sbjct: 241 SLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQC 282
Query: 254 LNEEANFRPLINDIVVALDYLVSQRD 279
+ RP I+ ++Y D
Sbjct: 283 WQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 102
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A G+ YL + +++RDL + N+L+ +
Sbjct: 103 YVREHKDNIGSQYLLNW------CVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHV 153
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 213
Query: 198 RKAMD 202
K D
Sbjct: 214 SKPYD 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 23 VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K++ + +G I E+ ++ L H+N+V L + ++ LV+E+M L+
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKK 91
Query: 82 HLYDLEPDQEP--LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
++ P L N +GL + H +++RDLK N+L++ K
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLK 148
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGR 198
L DFGLA+ + NT S V T Y AP+ M + S DI+S G +L E+ITG+
Sbjct: 149 LGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYG 166
LEYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 199
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y +PE + SD+++ G ++ +L+ G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 94 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 146 ITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 94 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 146 ITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 94 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 146 ITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 39 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 98
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + LEYLH + V+YRD+K N++LD D + K
Sbjct: 99 FHL-----SRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 150
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 151 ITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 39 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 98
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + L+YLH + N V+YRDLK N++LD D + K
Sbjct: 99 FHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIK 151
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 152 ITDFGLCKEG-IKDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 12 NVGLVWLCDQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRL 68
+G L VA+K LN + ++ + E+ L L H +++ L ++
Sbjct: 28 KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF 87
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY+ G L D++ +E + +I ++Y H V++RDLK
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHRHM---VVHRDLKPE 140
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYS 186
N+LLD N K++DFGL+ + G+ S G+ Y APE +SG+L + DI+S
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLYAGPEVDIWS 196
Query: 187 FGVVLLELITGRKAMD 202
GV+L L+ G D
Sbjct: 197 CGVILYALLCGTLPFD 212
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 37 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 96
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + L+YLH + N V+YRDLK N++LD D + K
Sbjct: 97 FHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIK 149
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 150 ITDFGLCKEG-IKDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 45 MLSLLHHDNLVTLIGYCTSGDQRLLV-YEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++S L H V L +C D++L Y G L ++ + E + +I
Sbjct: 90 VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 147
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 163
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +G
Sbjct: 148 ---SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 164 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T Y +PE SD+++ G ++ +L+ G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 170
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 171 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 231 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 272
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 273 CWQHQPEDRPNFAIILERIEYCTQDPD 299
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 178
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 239 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 280
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 281 CWQHQPEDRPNFAIILERIEYCTQDPD 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 178
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 239 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 280
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 281 CWQHQPEDRPNFAIILERIEYCTQDPD 307
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 24 AIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
A+K L E + E + E +L H L L + D+ V EY G L
Sbjct: 38 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 97
Query: 81 DHLYDLEPDQEPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
HL +E + R + L+YLH + N V+YRDLK N++LD D + K
Sbjct: 98 FHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIK 150
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
++DFGL K G + D + GT Y APE D + GVV+ E++ GR
Sbjct: 151 ITDFGLCKEG-IKDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 110 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 160
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 198 RKAMD 202
K D
Sbjct: 221 SKPYD 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 193
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 295
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 296 CWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 14 GLVWL-----CDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD--NLVTLIGYCTSGDQ 66
G VW ++A+KQ+ G + + I+ L + L HD +V G +
Sbjct: 39 GQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD 98
Query: 67 RLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLK 126
+ E M G+ + L Q P+ K+ V + L YL K VI+RD+K
Sbjct: 99 VFIAMELM--GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVK 152
Query: 127 SANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-----LK 181
+NILLD KL DFG++ G + D+ R G Y APE T ++
Sbjct: 153 PSNILLDERGQIKLCDFGIS--GRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 182 SDIYSFGVVLLELITGR 198
+D++S G+ L+EL TG+
Sbjct: 210 ADVWSLGISLVELATGQ 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTL------IGYCTSGDQRLLVYEYMP 75
VAIKQ E + + + +E+ ++ L+H N+V+ + D LL EY
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 76 MGSLEDHLYDLEP----DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
G L +L E + P+ + + L YLH +I+RDLK NI+
Sbjct: 103 GGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRYLHENR---IIHRDLKPENIV 154
Query: 132 LD---NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
L K+ D G AK D + T +GT Y APE K T+ D +SFG
Sbjct: 155 LQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 189 VVLLELITG 197
+ E ITG
Sbjct: 212 TLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTL------IGYCTSGDQRLLVYEYMP 75
VAIKQ E + + + +E+ ++ L+H N+V+ + D LL EY
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 76 MGSLEDHLYDLEP----DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
G L +L E + P+ + + L YLH +I+RDLK NI+
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRYLHENR---IIHRDLKPENIV 153
Query: 132 LD---NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFG 188
L K+ D G AK D + T +GT Y APE K T+ D +SFG
Sbjct: 154 LQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 189 VVLLELITG 197
+ E ITG
Sbjct: 211 TLAFECITG 219
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 SKPYD 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 193
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 295
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 296 CWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L++ + MP G L D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 SKPYD 223
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 185
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 186 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 246 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 287
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 288 CWQHQPEDRPNFAIILERIEYCTQDPD 314
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 195
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 196 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 256 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 297
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 298 CWQHQPEDRPNFAIILERIEYCTQDPD 324
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 198 RKAMD 202
K D
Sbjct: 217 SKPYD 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 179
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 240 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 281
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 282 CWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIA 102
L +LH N +V G S + + E+M GSL+ L E + K++
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVS 129
Query: 103 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 162
+ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +
Sbjct: 130 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFV 183
Query: 163 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 198 RKAMD 202
K D
Sbjct: 219 SKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAIK+L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFG AKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 198 RKAMD 202
K D
Sbjct: 224 SKPYD 228
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFI-VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
L ++VAIK ++ L I E+ L L H ++ L + ++ +V EY P
Sbjct: 33 LTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
G L D++ Q+ LS + + Y+H + +RDLK N+L D
Sbjct: 93 GELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYH 145
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS--DIYSFGVVLLEL 194
KL DFGL P G+ + G+ Y APE + GK L S D++S G++L L
Sbjct: 146 KLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLGSEADVWSMGILLYVL 203
Query: 195 ITG 197
+ G
Sbjct: 204 MCG 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 25 IKQLNHEGLQGHQEFI-VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHL 83
IK +N + Q E I E+ +L L H N++ + +V E G L + +
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 84 YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----K 139
+ + LS ++ L Y H + V+++DLK NIL D +P K
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILF-QDTSPHSPIK 167
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ DFGLA+L ++ ST GT Y APE +T K DI+S GVV+ L+TG
Sbjct: 168 IIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 111
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D ++
Sbjct: 112 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANE 165
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 104/266 (39%), Gaps = 30/266 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD---ND 135
L + P L+ + +A A G +YL I+RD+ + N LL
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 206
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 196 TGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC 253
+ SK E + + S R +DP P+ C + C
Sbjct: 267 SLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQC 308
Query: 254 LNEEANFRPLINDIVVALDYLVSQRD 279
+ RP I+ ++Y D
Sbjct: 309 WQHQPEDRPNFAIILERIEYCTQDPD 334
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 196
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 197 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 257 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 298
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 299 CWQHQPEDRPNFAIILERIEYCTQDPD 325
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYG 166
LEYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 200
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y +PE SD+++ G ++ +L+ G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYG 166
LEYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 196
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y +PE SD+++ G ++ +L+ G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 135
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 189
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 18 LCDQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
L D LVA+K++ E +G I EV +L L H N+VTL + LV+EY+
Sbjct: 25 LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
L+ +L D ++ + RGL Y H + V++RDLK N+L++
Sbjct: 84 KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERG 137
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELI 195
KL+DFGLA+ + T+ + V T Y P+ + S + + D++ G + E+
Sbjct: 138 ELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA 195
Query: 196 TGR 198
TGR
Sbjct: 196 TGR 198
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 179
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 180 GRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 240 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 281
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 282 CWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ L+ H+N++ I G Q L+ +Y GSL D+L D + +
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM--- 136
Query: 97 TRMKIAVGAARGLEYLHC-----KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV 151
+K+A + GL +LH + P + +RDLKS NIL+ + ++D GLA + +
Sbjct: 137 --LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFI 193
Query: 152 GDNTHV----STRVMGTYGYCAPEYAMSG------KLTLKSDIYSFGVVLLEL 194
D V +TRV GT Y PE + + +D+YSFG++L E+
Sbjct: 194 SDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 21 QLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
+LVAIK + + L+G + + E+ +L + H N+V L SG L+ + + G L
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL---LDNDF 136
D + + + + ++ ++YLH + +++RDLK N+L LD D
Sbjct: 104 FDRIVE----KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+SDFGL+K+ G V + GT GY APE + D +S GV+ L+
Sbjct: 157 KIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 197 G 197
G
Sbjct: 214 G 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 23 VAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VAI +L + ++E + E +++ + + ++ L+G C + +L+ + MP G L D
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 139
Query: 82 HLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
++ + + + Q L+W V A+G+ YL + +++RDL + N+L+ +
Sbjct: 140 YVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 190
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-G 197
K++DFGLAKL + + + + A E + T +SD++S+GV + EL+T G
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 250
Query: 198 RKAMD 202
K D
Sbjct: 251 SKPYD 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 105/267 (39%), Gaps = 32/267 (11%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K L Q +F++E L++S +H N+V IG R ++ E M G L+
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 82 HLYDLEP---DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + P L+ + +A A G +YL I+RD+ + N LL P
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP-GP 219
Query: 139 ----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
K+ DFG+A+ M + PE M G T K+D +SFGV+L E+
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 195 ITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ SK E + + S R +DP P+ C +
Sbjct: 280 FSLGYMPYPSKSNQEVLEFVTSGGR------------MDP------PKNCPGPVYRIMTQ 321
Query: 253 CLNEEANFRPLINDIVVALDYLVSQRD 279
C + RP I+ ++Y D
Sbjct: 322 CWQHQPEDRPNFAIILERIEYCTQDPD 348
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 108
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 162
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLS 94
Q + EV +L L H N+V L V EY G L + +++ L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 95 WNTRMKIAVGAARGLEYLHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG 152
+++ L+ H +++ V++RDLK AN+ LD N KL DFGLA++ +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LN 167
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
+ + +GT Y +PE KSDI+S G +L EL
Sbjct: 168 HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EYMP G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D K+
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EYMP G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D K+
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 170
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 224
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 108
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 162
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 108
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 162
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 54 LVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA-ARGLEY 111
LVTL Y + +L L+ +Y+ G L HL E E ++I VG LE+
Sbjct: 121 LVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYVGEIVLALEH 174
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
LH +IYRD+K NILLD++ + L+DFGL+K V D T + GT Y AP+
Sbjct: 175 LHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIEYMAPD 230
Query: 172 YAMSGKLTLKS--DIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSRPFLKDQ 223
G D +S GV++ EL+TG + GE+N SR LK +
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD---GEKNSQAEISRRILKSE 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
LEYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+PE SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 108
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 162
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 46 LSLLHHDN---LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMK 100
L +LH N +V G S + + E+M GSL+ L P+Q K
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGK 108
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+++ +GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 162
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+GT Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
+ Q A+K +N + + EV +L L H N++ L +V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN- 134
G L D + ++ S + +I G+ Y+H K N +++RDLK NILL++
Sbjct: 105 GGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN--IVHRDLKPENILLESK 157
Query: 135 --DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
D + K+ DFGL+ NT + R+ GT Y APE + G K D++S GV+L
Sbjct: 158 EKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILY 213
Query: 193 ELITG 197
L++G
Sbjct: 214 ILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
+ Q A+K +N + + EV +L L H N++ L +V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN- 134
G L D + ++ S + +I G+ Y+H K N +++RDLK NILL++
Sbjct: 105 GGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN--IVHRDLKPENILLESK 157
Query: 135 --DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
D + K+ DFGL+ NT + R+ GT Y APE + G K D++S GV+L
Sbjct: 158 EKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILY 213
Query: 193 ELITG 197
L++G
Sbjct: 214 ILLSG 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 159
KIAV + LE+LH K + VI+RD+K +N+L++ K+ DFG++ G + D+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKT 211
Query: 160 RVMGTYGYCAPEY---AMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW 215
G Y APE ++ K ++KSDI+S G+ ++EL R D SW
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SW 260
Query: 216 SRPFLKDQKKFVHLVDPLLHG-RYPRRCLNYAVAVTAMCLNEEANFRP 262
PF + K+ V P L ++ +++ T+ CL + + RP
Sbjct: 261 GTPF-QQLKQVVEEPSPQLPADKFSAEFVDF----TSQCLKKNSKERP 303
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L L+H N++ ++ +V E G L + + + + T
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 159
K V LE++H + V++RD+K AN+ + KL D GL + T +
Sbjct: 140 KYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAH 194
Query: 160 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
++GT Y +PE KSDI+S G +L E+
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K + + + +++IVE+ +L+ H +V L+G + ++ E+ P G+++
Sbjct: 38 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 97
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +L+ T +I V + LE L+ + +I+RDLK+ N+L+ + + +L+
Sbjct: 98 IMLELDRGL------TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 151
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-----LKSDIYSFGVVLLEL 194
DFG++ +GT + APE M + K+DI+S G+ L+E+
Sbjct: 152 DFGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+E EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG----ELFDFLAEKESLTED 108
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVG 152
+ G+ YLH K + + DLK NI+L N NP KL DFG+A G
Sbjct: 109 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ + GT + APE L L++D++S GV+ L++G
Sbjct: 166 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 103
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 104 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 161
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 162 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 88
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
M L+D + PL + +GL + H V++RDLK N+L++ +
Sbjct: 89 M-DLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTE 142
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLEL 194
KL+DFGLA+ V T+ V T Y APE + K + DI+S G + E+
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 195 ITGR 198
+T R
Sbjct: 201 VTRR 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 22 LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
L A K + + + +++IVE+ +L+ H +V L+G + ++ E+ P G+++
Sbjct: 46 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 105
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+ +L+ T +I V + LE L+ + +I+RDLK+ N+L+ + + +L+
Sbjct: 106 IMLELDRGL------TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT-----LKSDIYSFGVVLLEL 194
DFG++ +GT + APE M + K+DI+S G+ L+E+
Sbjct: 160 DFGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+E EV +L + H N++TL + +L+ E + G L +D ++E L+ +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTED 115
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVG 152
+ G+ YLH K + + DLK NI+L N NP KL DFG+A G
Sbjct: 116 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ + GT + APE L L++D++S GV+ L++G
Sbjct: 173 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 102
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 103 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 161 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 108
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 109 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 166
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 167 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
H+E E+ +L L H N++ L LV E+ G L + + + E +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND---FNPKLSDFGLAKLGPVG 152
N +I G YLH +++RD+K NILL+N N K+ DFGL+
Sbjct: 150 NIMKQILSGIC----YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FS 200
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 212
+ + R +GT Y APE + K K D++S GV++ L+ G GQ +Q++
Sbjct: 201 KDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFG---GQNDQDI 255
Query: 213 VS-------------WSRPFLKDQKKFVHLVDPLLHGRYPRRC 242
+ W + D+ K L+ +L Y +RC
Sbjct: 256 IKKVEKGKYYFDFNDWKN--ISDEAK--ELIKLMLTYDYNKRC 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 87
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
M L+D + PL + +GL + H V++RDLK N+L++ +
Sbjct: 88 M-DLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTE 141
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLEL 194
KL+DFGLA+ V T+ V T Y APE + K + DI+S G + E+
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Query: 195 ITGR 198
+T R
Sbjct: 200 VTRR 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 105
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 106 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 163
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 164 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 26/168 (15%)
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 159
KIAV + LE+LH K + VI+RD+K +N+L++ K+ DFG++ G + D+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDI 168
Query: 160 RVMGTYGYCAPEY---AMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW 215
G Y APE ++ K ++KSDI+S G+ ++EL R D SW
Sbjct: 169 DA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SW 216
Query: 216 SRPFLKDQKKFVHLVDPLLHG-RYPRRCLNYAVAVTAMCLNEEANFRP 262
PF + K+ V P L ++ +++ T+ CL + + RP
Sbjct: 217 GTPF-QQLKQVVEEPSPQLPADKFSAEFVDF----TSQCLKKNSKERP 259
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 51 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 110
H +++TLI S LV++ M G L D+L + + LS I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVS 214
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
+LH +++RDLK NILLD++ +LSDFG + G+ + GT GY AP
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAP 268
Query: 171 E---------YAMSGKLTLKSDIYSFGVVLLELITG 197
E + GK + D+++ GV+L L+ G
Sbjct: 269 EILKCSMDETHPGYGK---EVDLWACGVILFTLLAG 301
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLL-HHDNLVTLIGYCTS------GDQRLLVYEY 73
QL AIK ++ G + +E E+ ML HH N+ T G DQ LV E+
Sbjct: 50 QLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
GS+ D + + + + W I RGL +LH VI+RD+K N+LL
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQHK---VIHRDIKGQNVLLT 163
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----SGKLTLKSDIYSFG 188
+ KL DFG++ + +GT + APE KSD++S G
Sbjct: 164 ENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 221
Query: 189 VVLLELITG 197
+ +E+ G
Sbjct: 222 ITAIEMAEG 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+E EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG----ELFDFLAEKESLTED 129
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVG 152
+ G+ YLH K + + DLK NI+L N NP KL DFG+A G
Sbjct: 130 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ + GT + APE L L++D++S GV+ L++G
Sbjct: 187 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
+ Q A+K +N + + EV +L L H N++ L +V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN- 134
G L D + ++ S + +I G+ Y+H K N +++RDLK NILL++
Sbjct: 105 GGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN--IVHRDLKPENILLESK 157
Query: 135 --DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
D + K+ DFGL+ NT + R+ GT Y APE + G K D++S GV+L
Sbjct: 158 EKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILY 213
Query: 193 ELITG 197
L++G
Sbjct: 214 ILLSG 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 72 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 128
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 129 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 186
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 187 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 40/253 (15%)
Query: 25 IKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
IK++N + +E EV +L+ + H N+V +V +Y G L
Sbjct: 54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 83 LYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
+ L + + L W ++ +A L+++H + +++RD+KS NI L D
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLA------LKHVHDRK---ILHRDIKSQNIFLTKDGTV 164
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 198
+L DFG+A++ + ++ +GT Y +PE + KSDI++ G VL EL T +
Sbjct: 165 QLGDFGIARV--LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
Query: 199 KAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAV---AVTAMCLN 255
A + + +LV ++ G +P L+Y+ ++ +
Sbjct: 223 HAFEAGSMK--------------------NLVLKIISGSFPPVSLHYSYDLRSLVSQLFK 262
Query: 256 EEANFRPLINDIV 268
RP +N I+
Sbjct: 263 RNPRDRPSVNSIL 275
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 38/257 (14%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
+AIK++ + Q E+ + L H N+V +G + + E +P GSL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 83 LYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L L+ +++ + + T+ + GL+YLH + +++RD+K N+L+ N ++
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---DNQIVHRDIKGDNVLI-NTYSG 160
Query: 139 --KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
K+SDFG +K L + T T GT Y APE G +DI+S G ++E
Sbjct: 161 VLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 194 LITGRKAM-DLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ TG+ +L + Q V + +H P A A
Sbjct: 218 MATGKPPFYELGEPQAAMFKVGMFK----------------VHPEIPESMSAEAKAFILK 261
Query: 253 CLNEEANFRPLINDIVV 269
C + + R ND++V
Sbjct: 262 CFEPDPDKRACANDLLV 278
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D K+
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
E+ +L H+N++ I + Q LV +Y GSL D+L E +
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 141
Query: 97 TRMKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGP 150
+K+A+ A GL +LH + P + +RDLKS NIL+ + ++D GLA +
Sbjct: 142 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 151 VGDNTHVS-TRVMGTYGYCAPEYAMSGKLTLK-------SDIYSFGVVLLEL 194
D ++ +GT Y APE + + +K +DIY+ G+V E+
Sbjct: 200 ATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 38/257 (14%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
+AIK++ + Q E+ + L H N+V +G + + E +P GSL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 83 LYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L L+ +++ + + T+ + GL+YLH + +++RD+K N+L+ N ++
Sbjct: 96 LRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---DNQIVHRDIKGDNVLI-NTYSG 146
Query: 139 --KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLE 193
K+SDFG +K L + T T GT Y APE G +DI+S G ++E
Sbjct: 147 VLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 194 LITGRKAM-DLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 252
+ TG+ +L + Q V + +H P A A
Sbjct: 204 MATGKPPFYELGEPQAAMFKVGMFK----------------VHPEIPESMSAEAKAFILK 247
Query: 253 CLNEEANFRPLINDIVV 269
C + + R ND++V
Sbjct: 248 CFEPDPDKRACANDLLV 264
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY---MP-MGSLEDHLYDLEPDQEPLSWNT 97
E+L+L + H+N++ L+ T Y++ MP M + + +E +E + +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-- 148
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+ +GL+Y+H V++RDLK N+ ++ D K+ DFGLA+ +V
Sbjct: 149 ---LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV 202
Query: 158 STRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
TR Y APE +S DI+S G ++ E++TG+
Sbjct: 203 VTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTY 165
+G++YLH N VI+RDLK N+ L++D + K+ DFGLA K+ G+ + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTP 206
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
Y APE + + DI+S G +L L+ G+ + S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 34 QGHQEFIVEVLMLSLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
QG + E +MLSL+ + + + Y + D+ + + M G L HL Q
Sbjct: 231 QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQ 285
Query: 91 EPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+ M+ A GLE++H N V+YRDLK ANILLD + ++SD GLA
Sbjct: 286 HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CD 341
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 197
H S +GT+GY APE G +D +S G +L +L+ G
Sbjct: 342 FSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 45 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 104
+L + H +V LI +G + L+ EY+ G L LE + + +T
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAE 129
Query: 105 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 164
+ L +LH K +IYRDLK NI+L++ + KL+DFGL K + D T V+ GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGT 184
Query: 165 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE M D +S G ++ +++TG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 34 QGHQEFIVEVLMLSLLHHDN--LVTLIGYCT-SGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
QG + E +MLSL+ + + + Y + D+ + + M G L HL Q
Sbjct: 231 QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQ 285
Query: 91 EPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+ M+ A GLE++H N V+YRDLK ANILLD + ++SD GLA
Sbjct: 286 HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CD 341
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 197
H S +GT+GY APE G +D +S G +L +L+ G
Sbjct: 342 FSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 34 QGHQEFIVEVLMLSLLHHDN--LVTLIGYCT-SGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
QG + E +MLSL+ + + + Y + D+ + + M G L HL Q
Sbjct: 231 QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQ 285
Query: 91 EPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+ M+ A GLE++H N V+YRDLK ANILLD + ++SD GLA
Sbjct: 286 HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CD 341
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 197
H S +GT+GY APE G +D +S G +L +L+ G
Sbjct: 342 FSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
+G++YLH N VI+RDLK N+ L++D + K+ DFGLA + + + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPN 207
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
Y APE + + DI+S G +L L+ G+ + S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 34 QGHQEFIVEVLMLSLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
QG + E +MLSL+ + + + Y + D+ + + M G L HL Q
Sbjct: 230 QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQ 284
Query: 91 EPLSWNTRMKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+ M+ A GLE++H N V+YRDLK ANILLD + ++SD GLA
Sbjct: 285 HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CD 340
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 197
H S +GT+GY APE G +D +S G +L +L+ G
Sbjct: 341 FSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 24 AIKQLNHEGLQGHQEFIVEV-LMLSLLHHDNLVTLIGYCT-------SGDQRLLVYEYMP 75
A+K+L + ++ I EV M L H N+V + +G L+ +
Sbjct: 57 ALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC 116
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L + L +E + PLS +T +KI R ++++H + PP+I+RDLK N+LL N
Sbjct: 117 KGQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQ 174
Query: 136 FNPKLSDFGLA 146
KL DFG A
Sbjct: 175 GTIKLCDFGSA 185
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 45 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 104
+L + H +V LI +G + L+ EY+ G L LE + + +T
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAE 129
Query: 105 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 164
+ L +LH K +IYRDLK NI+L++ + KL+DFGL K + D T V+ GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHTFCGT 184
Query: 165 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y APE M D +S G ++ +++TG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 108
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 109 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 164
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
+G++YLH N VI+RDLK N+ L++D + K+ DFGLA + + + GT
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPN 191
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
Y APE + + DI+S G +L L+ G+ + S
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
+G++YLH N VI+RDLK N+ L++D + K+ DFGLA + + + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPN 207
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
Y APE + + DI+S G +L L+ G+ + S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 106
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 107 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 162
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 19 CDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL--------------IGYCTSG 64
CD+ VAIK++ Q + + E+ ++ L HDN+V + +G T
Sbjct: 35 CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 65 DQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRD 124
+ +V EYM E L ++ +Q PL RGL+Y+H AN V++RD
Sbjct: 95 NSVYIVQEYM-----ETDLANVL-EQGPLLEEHARLFMYQLLRGLKYIHS-AN--VLHRD 145
Query: 125 LKSANILLDN-DFNPKLSDFGLAK-LGP-VGDNTHVSTRVMGTYGYCAPEYAMS-GKLTL 180
LK AN+ ++ D K+ DFGLA+ + P H+S ++ T Y +P +S T
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTK 204
Query: 181 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK 225
D+++ G + E++TG+ + + L+ S P + ++ +
Sbjct: 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 48 LLHHDNLVTLIGYCT----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
+L H+N++ I S Q L+ Y MGSL D+L D ++I +
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVL 112
Query: 104 GAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------V 151
A GL +LH + P + +RDLKS NIL+ + ++D GLA + V
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 194
G+N V GT Y APE + + + + DI++FG+VL E+
Sbjct: 173 GNNPRV-----GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 21 QLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
+L A+K + + L+G + I E+ +L + H+N+V L S + LV + + G L
Sbjct: 48 KLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL 107
Query: 80 EDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL--- 132
D + + E D +T ++ + A + YLH +++RDLK N+L
Sbjct: 108 FDRIVEKGFYTEKDA-----STLIRQVLDA---VYYLHRMG---IVHRDLKPENLLYYSQ 156
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
D + +SDFGL+K+ GD V + GT GY APE + D +S GV+
Sbjct: 157 DEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 213
Query: 193 ELITG 197
L+ G
Sbjct: 214 ILLCG 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 118
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 119 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 174
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 112
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 168
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ +++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S GV++
Sbjct: 159 VKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 48 LLHHDNLVTLIGYCT----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
+L H+N++ I S Q L+ Y MGSL D+L D ++I +
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVL 112
Query: 104 GAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------V 151
A GL +LH + P + +RDLKS NIL+ + ++D GLA + V
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 194
G+N V GT Y APE + + + + DI++FG+VL E+
Sbjct: 173 GNNPRV-----GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 24 AIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT----SGDQRLLVYEYMPMGSL 79
A+K++ Q +E E M L +H N++ L+ YC + + L+ + G+L
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 80 EDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
+ + L+ L+ + + + +G RGLE +H K +RDLK NILL ++ P
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPV 174
Query: 140 LSDFGLAKLGPV---GDNTHVSTRVMG----TYGYCAPE-YAMSGKLTL--KSDIYSFGV 189
L D G + G ++ + T Y APE +++ + ++D++S G
Sbjct: 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGC 234
Query: 190 VLLELITGRKAMDLSKGQGE 209
VL ++ G D+ +G+
Sbjct: 235 VLYAMMFGEGPYDMVFQKGD 254
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVT----LIGYCTSGDQRLLVY 71
L Q VAIK++ + + + + + E+ +L HDN++ L G+ + +
Sbjct: 77 LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV-- 134
Query: 72 EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
Y+ + +E L+ + +PL+ RGL+Y+H VI+RDLK +N+L
Sbjct: 135 -YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLL 190
Query: 132 LDNDFNPKLSDFGLAK---LGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKLTLKSDIYSF 187
++ + K+ DFG+A+ P ++ + T + T Y APE +S + T D++S
Sbjct: 191 VNENCELKIGDFGMARGLCTSP-AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249
Query: 188 GVVLLELITGRK 199
G + E++ R+
Sbjct: 250 GCIFGEMLARRQ 261
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 126
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 127 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 182
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY---MP-MGSLEDHLYDLEPDQEPLSWNT 97
E+L+L + H+N++ L+ T Y++ MP M + + L+ +E + +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-- 130
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+ +GL+Y+H V++RDLK N+ ++ D K+ DFGLA+ +V
Sbjct: 131 ---LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV 184
Query: 158 STRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
TR Y APE +S DI+S G ++ E++TG+
Sbjct: 185 VTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 112
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH- 156
+++ + G++YL ++RDL + N+LL K+SDFGL+K +N +
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 157 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
T + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVT----LIGYCTSGDQRLLVY 71
L Q VAIK++ + + + + + E+ +L HDN++ L G+ + +
Sbjct: 78 LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV-- 135
Query: 72 EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
Y+ + +E L+ + +PL+ RGL+Y+H VI+RDLK +N+L
Sbjct: 136 -YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLL 191
Query: 132 LDNDFNPKLSDFGLAK---LGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKLTLKSDIYSF 187
++ + K+ DFG+A+ P ++ + T + T Y APE +S + T D++S
Sbjct: 192 VNENCELKIGDFGMARGLCTSP-AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250
Query: 188 GVVLLELITGRK 199
G + E++ R+
Sbjct: 251 GCIFGEMLARRQ 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ +++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S GV++
Sbjct: 159 VKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 128
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 184
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKN 128
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++RDL + N+LL K+SDFGL+K D +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 184
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 48 LLHHDNLVTLIGYCT----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
+L H+N++ I S Q L+ Y MGSL D+L D ++I +
Sbjct: 87 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVL 141
Query: 104 GAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------V 151
A GL +LH + P + +RDLKS NIL+ + ++D GLA + V
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 201
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 194
G+N V GT Y APE + + + + DI++FG+VL E+
Sbjct: 202 GNNPRV-----GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 99 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 150
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 204 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 35 GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLS 94
+E EV +L + H N++TL + +L+ E + G L +D +E LS
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 95 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGP 150
G+ YLH K + + DLK NI+L + P KL DFGLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGE 209
+ D + GT + APE L L++D++S GV+ L++G + +K +
Sbjct: 169 IEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 210 QNLVSWSRPFLKDQKKFVH 228
N+ S S F D++ F H
Sbjct: 228 ANITSVSYDF--DEEFFSH 244
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 35 GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLS 94
+E EV +L + H N++TL + +L+ E + G L +D +E LS
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 95 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGP 150
G+ YLH K + + DLK NI+L + P KL DFGLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGE 209
+ D + GT + APE L L++D++S GV+ L++G + +K +
Sbjct: 169 IEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 210 QNLVSWSRPFLKDQKKFVH 228
N+ S S F D++ F H
Sbjct: 228 ANITSVSYDF--DEEFFSH 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 113
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLG 149
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA K+
Sbjct: 114 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
G+ V + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 167 YDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L ++
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD----KN 470
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++N ++RDL + N+LL K+SDFGL+K D +
Sbjct: 471 IIELVHQVSMGMKYLE-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 526
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 38 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 97
E + E ++ L + +V +IG C + + +LV E +G L +L ++
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD----KN 471
Query: 98 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+++ + G++YL ++N ++RDL + N+LL K+SDFGL+K D +
Sbjct: 472 IIELVHQVSMGMKYLE-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 527
Query: 158 STRVMGTY--GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 206
+ G + + APE K + KSD++SFGV++ E + G+K KG
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +K++ H + E +L ++ LV L +V EY P G +
Sbjct: 78 KVVKLKEIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFGLAK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+E EV +L + H N++TL + +L+ E + G L +D +E LS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEE 115
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVG 152
G+ YLH K + + DLK NI+L + P KL DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIE 170
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGEQN 211
D + GT + APE L L++D++S GV+ L++G + +K + N
Sbjct: 171 DGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 212 LVSWSRPFLKDQKKFVH 228
+ S S F D++ F H
Sbjct: 230 ITSVSYDF--DEEFFSH 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 71 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 123 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 176 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 64 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 115
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 116 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 168
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 169 TDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 78 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 137
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLG 149
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA K+
Sbjct: 138 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 190
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
G+ V + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 191 YDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 139
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLG 149
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA K+
Sbjct: 140 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
G+ V + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 193 YDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+P G +
Sbjct: 71 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 123 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 176 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 33 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 92
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 130
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGXKYY 188
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 86
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
M L+ + PL + +GL + H V++RDLK N+L++ +
Sbjct: 87 M-DLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTE 140
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLEL 194
KL+DFGLA+ V T+ V T Y APE + K + DI+S G + E+
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Query: 195 ITGR 198
+T R
Sbjct: 199 VTRR 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGXKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 88
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
M L+ + PL + +GL + H V++RDLK N+L++ +
Sbjct: 89 M-DLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTE 142
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLEL 194
KL+DFGLA+ V T+ V T Y APE + K + DI+S G + E+
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Query: 195 ITGR 198
+T R
Sbjct: 201 VTRR 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 19 CDQLVAIKQLN----HEGLQG-HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY 73
+Q+VAIK++ E G ++ + E+ +L L H N++ L+ LV+++
Sbjct: 34 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD 133
M LE + D P M + + +GLEYLH +++RDLK N+LLD
Sbjct: 94 MET-DLEVIIKDNSLVLTPSHIKAYMLMTL---QGLEYLHQHW---ILHRDLKPNNLLLD 146
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL-TLKSDIYSFGVVLL 192
+ KL+DFGLAK G + T Y APE ++ + D+++ G +L
Sbjct: 147 ENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA 204
Query: 193 ELI 195
EL+
Sbjct: 205 ELL 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 14 GLVWLCDQLV-----AIKQLNHEGLQ--GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQ 66
G V LC V AIK + + + + + EV +L LL H N++ L +
Sbjct: 51 GEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN 110
Query: 67 RLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAA-------RGLEYLHCKANP 118
LV E G L D + RMK V AA G+ YLH K N
Sbjct: 111 YYLVMECYKGGELFDEII------------HRMKFNEVDAAVIIKQVLSGVTYLH-KHN- 156
Query: 119 PVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 175
+++RDLK N+LL++ D K+ DFGL+ V +N +GT Y APE +
Sbjct: 157 -IVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLGTAYYIAPE-VLR 211
Query: 176 GKLTLKSDIYSFGVVLLELITG 197
K K D++S GV+L L+ G
Sbjct: 212 KKYDEKCDVWSIGVILFILLAG 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLSFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHV 157
KIAV + LE+LH K + VI+RD+K +N+L++ K DFG++ + V +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR 217
+ PE G ++KSDI+S G+ +EL R D SW
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYD-----------SWGT 245
Query: 218 PFLKDQKKFVHLVDPLLHG-RYPRRCLNYAVAVTAMCLNEEANFRP 262
PF + K+ V P L ++ +++ T+ CL + + RP
Sbjct: 246 PF-QQLKQVVEEPSPQLPADKFSAEFVDF----TSQCLKKNSKERP 286
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 84
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 122
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 180
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL- 84
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
L+D + PL + +GL + H V++RDLK N+L++ +
Sbjct: 85 HQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTE 139
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLEL 194
KL+DFGLA+ V T+ V T Y APE + K + DI+S G + E+
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Query: 195 ITGR 198
+T R
Sbjct: 198 VTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 30 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 89
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 127
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 185
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 84
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 122
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 180
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
+E EV +L + H N++TL + +L+ E + G L+D +E LS
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGG----ELFDFLAQKESLSE 114
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPV 151
G+ YLH K + + DLK NI+L + P KL DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EI 169
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
D + GT + APE L L++D++S GV+ L++G
Sbjct: 170 EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 33 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 92
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 130
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 188
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 35 GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLS 94
+E EV +L + H N++TL + +L+ E + G L +D +E LS
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 95 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGP 150
G+ YLH K + + DLK NI+L + P KL DFGLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ D + GT + APE L L++D++S GV+ L++G
Sbjct: 169 IEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH--LYDLEPDQEPLSWNTRM 99
E+ +L L H+NLV L+ C + LV+E++ DH L DLE L +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQ 127
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL----GPVGDNT 155
K G+ + H +I+RD+K NIL+ KL DFG A+ G V D+
Sbjct: 128 KYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD- 183
Query: 156 HVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
V+TR Y APE + K D+++ G ++ E+ G
Sbjct: 184 EVATR-----WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 86
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 124
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 182
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 35 GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLS 94
+E EV +L + H N++TL + +L+ E + G L +D +E LS
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 95 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGP 150
G+ YLH K + + DLK NI+L + P KL DFGLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ D + GT + APE L L++D++S GV+ L++G
Sbjct: 169 IEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 119
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP 150
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA
Sbjct: 120 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--K 170
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
V + + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 171 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP 150
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA
Sbjct: 116 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--K 166
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
V + + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY P G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 87
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 125
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 183
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ L L +V EY P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 33 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 90
L+ HQ + +E+ + L H ++V G+ D +V E SL + +
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP 150
EP + +I +G +YLH VI+RDLK N+ L+ D K+ DFGLA
Sbjct: 116 EPEARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--K 166
Query: 151 VGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 204
V + + GT Y APE + + D++S G ++ L+ G+ + S
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 87
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 125
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 183
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 44 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++L + H LV L + D+ V +Y+ G L Y L+ ++ L R A
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAA 146
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 163
A L YLH ++YRDLK NILLD+ + L+DFGL K + N+ ST G
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTST-FCG 201
Query: 164 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T Y APE D + G VL E++ G
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 69 LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSA 128
+V EY P G + HL + EP + +I + EYLH +IYRDLK
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPE 171
Query: 129 NILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIY 185
N+L+D K++DFG AK V R GT Y APE +S D +
Sbjct: 172 NLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 186 SFGVVLLELITG 197
+ GV++ E+ G
Sbjct: 224 ALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ L L +V EY P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 51 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 110
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 169
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 126 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLA 178
Query: 170 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 197
PE + GK + D++S GV++ L+ G
Sbjct: 179 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 212
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ L L +V EY P G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D K+
Sbjct: 131 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 86
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 124
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 182
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 51 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 110
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 169
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 139 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLA 191
Query: 170 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 197
PE + GK + D++S GV++ L+ G
Sbjct: 192 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 88
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 126
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 184
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 87
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 125
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 183
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 86
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 124
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 182
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 84
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 122
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 180
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 30 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 89
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 127
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 185
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 88
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 126
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 184
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 88
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 89 QDLKTFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 126
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 184
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +K++ H + E +L ++ LV L +V EY P G +
Sbjct: 78 KVVKLKEIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFGLAK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 84
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 122
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 180
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 123
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 181
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLL-VYEYMPMGSLEDHLYDLEPDQEPLSWNTR 98
+ E +LSL + +T + C RL V E++ G L H+ E R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE-----AR 125
Query: 99 MKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+ A L +LH K +IYRDLK N+LLD++ + KL+DFG+ K G N
Sbjct: 126 ARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVT 180
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 202
+ GT Y APE D ++ GV+L E++ G +
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM- 74
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E++
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 86
Query: 75 ---------------PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
P+ ++ +L+ L +GL + H
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 124
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 182
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY-- 73
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E+
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH 84
Query: 74 --------------MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
+P+ ++ +L+ L +GL + H
Sbjct: 85 QDLKTFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 122
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ T + T Y APE + K
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 180
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 51 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 110
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 169
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 139 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCGTPSYLA 191
Query: 170 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 197
PE + GK + D++S GV++ L+ G
Sbjct: 192 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ +++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G ++
Sbjct: 159 VKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR----LLVYEYMPMGSLEDHLYDLEPDQE 91
Q F E L L H N+V S + +LV E G+L+ +L + +
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI 128
Query: 92 PL--SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKL 148
+ SW ++ +GL++LH + PP+I+RDLK NI + K+ D GLA L
Sbjct: 129 KVLRSWCRQI------LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 149 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ V+GT + APE K D+Y+FG LE T
Sbjct: 182 ----KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ + DI+S G ++ EL+TGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L L H N+V L + + +LV+E++ +D L+ + L T
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAK 103
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LG-PVGDNTHV 157
+ G+ Y H + V++RDLK N+L++ + K++DFGLA+ G PV TH
Sbjct: 104 SFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 158 STRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITG 197
T Y AP+ M S K + DI+S G + E++ G
Sbjct: 161 VV----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 23 VAIKQLNHEGLQGH--QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR------LLVYEYM 74
VA+K L + + +EF+ E + H ++ L+G + +++ +M
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 75 PMGSLEDHLYDLEPDQEP--LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
G L L + P L T ++ V A G+EYL + I+RDL + N +L
Sbjct: 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCML 170
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
D ++DFGL++ GD + A E T+ SD+++FGV +
Sbjct: 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMW 230
Query: 193 ELIT 196
E++T
Sbjct: 231 EIMT 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L L H N+V L + + +LV+E++ +D L+ + L T
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAK 103
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LG-PVGDNTHV 157
+ G+ Y H + V++RDLK N+L++ + K++DFGLA+ G PV TH
Sbjct: 104 SFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH- 159
Query: 158 STRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITG 197
+ T Y AP+ M S K + DI+S G + E++ G
Sbjct: 160 ---EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
I E+ +L L H N+V L + + +LV+E++ +D L+ + L T
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAK 103
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LG-PVGDNTHV 157
+ G+ Y H + V++RDLK N+L++ + K++DFGLA+ G PV TH
Sbjct: 104 SFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 158 STRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITG 197
T Y AP+ M S K + DI+S G + E++ G
Sbjct: 161 VV----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ +++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G ++
Sbjct: 159 VKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 47/205 (22%)
Query: 24 AIKQLNHEGLQGHQEFIVEVLMLSLLHHD-------------NLVTLIGYCTSGDQRLLV 70
AIK++ H + + EV++L+ L+H N V + +
Sbjct: 35 AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 71 YEYMPMGSLEDHLYDLEPDQEPLS-WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
EY G+L D ++ +Q+ W +I L Y+H + +I+RDLK N
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHSQG---IIHRDLKPMN 146
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVS------------------TRVMGTYGYCAPE 171
I +D N K+ DFGLAK N H S T +GT Y A E
Sbjct: 147 IFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200
Query: 172 Y-AMSGKLTLKSDIYSFGVVLLELI 195
+G K D+YS G++ E+I
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 46 LSLLHHDNLVTLIGYC-TSGDQR----LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
L H N+V L+ C TS R LV+E++ L +L P P T
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKD 124
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+ RGL++LH +++RDLK NIL+ + KL+DFGLA+ + T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTP 178
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 210
V+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 41/176 (23%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHL 83
I E+ +L L+H N+V L+ + ++ LV+E++ P+ ++ +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 84 YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDF 143
+ L +GL + H V++RDLK N+L++ + KL+DF
Sbjct: 110 FQL-------------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADF 147
Query: 144 GLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 198
GLA+ V T+ T + T Y APE + K + DI+S G + E++T R
Sbjct: 148 GLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 41/176 (23%)
Query: 40 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHL 83
I E+ +L L+H N+V L+ + ++ LV+E++ P+ ++ +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 84 YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDF 143
+ L +GL + H V++RDLK N+L++ + KL+DF
Sbjct: 109 FQL-------------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADF 146
Query: 144 GLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 198
GLA+ V T+ T + T Y APE + K + DI+S G + E++T R
Sbjct: 147 GLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
+A K + G++ +E E+ +++ L H NL+ L S + +LV EY+ G L D
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP-KL 140
+ D + L MK R + ++ +++ DLK NIL ++ D K+
Sbjct: 177 IIDESYNLTELDTILFMKQICEGIRHMHQMY------ILHLDLKPENILCVNRDAKQIKI 230
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
DFGLA+ + V+ GT + APE ++ +D++S GV+ L++G
Sbjct: 231 IDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSG---DQRLLVYEYMP-----MGSLEDHLYDLEPDQEPL 93
E+ +L + H+N++ L+ T D Y MP +G L H E L
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKL 125
Query: 94 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 153
+ + +GL Y+H +I+RDLK N+ ++ D K+ DFGLA+
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
Query: 154 NTHVSTRVMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
V TR Y APE ++ + T DI+S G ++ E+ITG+
Sbjct: 183 XGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 21 QLVAIK----QLNHEGLQGHQEFIVEVLM-LSLLHHDNLVTLIGYCTSG-----DQRLLV 70
+ VA+K Q EG+ V VL L H N+V L CT + LV
Sbjct: 38 RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV 97
Query: 71 YEYMPMGSLEDHLYDLEPDQEP-LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+E++ +D L+ EP + T + RGL++LH V++RDLK N
Sbjct: 98 FEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQN 150
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
IL+ + KL+DFGLA++ T V+ T Y APE + D++S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
Query: 190 VLLELI 195
+ E+
Sbjct: 208 IFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 21 QLVAIK----QLNHEGLQGHQEFIVEVLM-LSLLHHDNLVTLIGYCTSG-----DQRLLV 70
+ VA+K Q EG+ V VL L H N+V L CT + LV
Sbjct: 38 RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV 97
Query: 71 YEYMPMGSLEDHLYDLEPDQEP-LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+E++ +D L+ EP + T + RGL++LH V++RDLK N
Sbjct: 98 FEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQN 150
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
IL+ + KL+DFGLA++ T V+ T Y APE + D++S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
Query: 190 VLLELI 195
+ E+
Sbjct: 208 IFAEMF 213
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 22/181 (12%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWN 96
E+++L ++H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL 129
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 156
+ G+++LH +I+RDLK +NI++ +D K+ DFGLA+ N
Sbjct: 130 LYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFM 179
Query: 157 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS 216
++ V+ Y Y APE + DI+S G ++ EL+ G QG ++ W+
Sbjct: 180 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF-----QGTDHIDQWN 233
Query: 217 R 217
+
Sbjct: 234 K 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 21 QLVAIK----QLNHEGLQGHQEFIVEVLM-LSLLHHDNLVTLIGYCTSG-----DQRLLV 70
+ VA+K Q EG+ V VL L H N+V L CT + LV
Sbjct: 38 RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV 97
Query: 71 YEYMPMGSLEDHLYDLEPDQEP-LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
+E++ +D L+ EP + T + RGL++LH V++RDLK N
Sbjct: 98 FEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQN 150
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
IL+ + KL+DFGLA++ T V+ T Y APE + D++S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
Query: 190 VLLELI 195
+ E+
Sbjct: 208 IFAEMF 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 18 LCDQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY-- 73
L ++VA+K+ L+ E I E+ +L L+H N+V L+ + ++ LV+E+
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD 88
Query: 74 --------------MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 119
+P+ ++ +L+ L +GL + H
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL-------------------LQGLAFCHSHR--- 126
Query: 120 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L 178
V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y APE + K
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYY 184
Query: 179 TLKSDIYSFGVVLLELITGR 198
+ DI+S G + E++T R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL-----V 70
+ D+ VAIK+L+ + + E++++ ++H N+++L+ T Q+ L V
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP--QKTLEEFQDV 104
Query: 71 YEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
Y M M + + +E D E +S+ + G+++LH +I+RDLK +N
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
I++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 213
Query: 190 VLLELI 195
++ E++
Sbjct: 214 IMGEMV 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 167
L+YL N +I+RD+K NILLD + ++DF +A + P T ++T + GT Y
Sbjct: 127 ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGTKPY 180
Query: 168 CAPEYAMSGK---LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 213
APE S K + D +S GV EL+ GR+ + + +V
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL-----V 70
+ D+ VAIK+L+ + + E++++ ++H N+++L+ T Q+ L V
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP--QKTLEEFQDV 97
Query: 71 YEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
Y M M + + +E D E +S+ + G+++LH +I+RDLK +N
Sbjct: 98 YLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG---IIHRDLKPSN 149
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
I++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G
Sbjct: 150 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 206
Query: 190 VLLELI 195
++ E++
Sbjct: 207 IMGEMV 212
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
+G++Y+H K +I+RDLK +NI L + K+ DFGL N TR GT
Sbjct: 146 TKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKRTRSKGTL 199
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
Y +PE S + D+Y+ G++L EL+
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R + GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL-----V 70
+ D+ VAIK+L+ + + E++++ ++H N+++L+ T Q+ L V
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP--QKTLEEFQDV 104
Query: 71 YEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
Y M M + + +E D E +S+ + G+++LH +I+RDLK +N
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
I++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 213
Query: 190 VLLELI 195
++ E++
Sbjct: 214 IMGEMV 219
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH + +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 79 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R + GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 99 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 151 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 204 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFAEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 44 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++L H N++TL G +V E M G L D + Q+ S +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLF 123
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 159
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMT 179
Query: 160 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T + APE DI+S GV+L ++TG
Sbjct: 180 PCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G ++
Sbjct: 159 VKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 65 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 117 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQV 169
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 170 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 118
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 119 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 175 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 99 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 141 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK T + GT Y APE +S D ++ GV++ E+ G
Sbjct: 204 TDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 42 EVLMLSLLHHDNLVTLIGYCT--SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
E+ +L L H N+V L+ + D +V+E + G + + P +PLS +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 100 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 159
+G+EYLH + +I+RD+K +N+L+ D + K++DFG++ D +T
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 160 RVMGTYGYCAPEYAMSGKLTLKS---DIYSFGVVLLELITGR 198
+GT + APE + D+++ GV L + G+
Sbjct: 198 --VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 118
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 119 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 175 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 73 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 125 SHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 177
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 178 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLL-----V 70
+ D+ VAIK+L+ + + E++++ ++H N+++L+ T Q+ L V
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP--QKTLEEFQDV 104
Query: 71 YEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSAN 129
Y M M + + +E D E +S+ + G+++LH +I+RDLK +N
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSN 156
Query: 130 ILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
I++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 213
Query: 190 VLLELI 195
++ E++
Sbjct: 214 IMGEMV 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 22/181 (12%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWN 96
E+++L ++H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL 131
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 156
+ G+++LH +I+RDLK +NI++ +D K+ DFGLA+ N
Sbjct: 132 LYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFM 181
Query: 157 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS 216
++ V+ Y Y APE + DI+S G ++ EL+ G QG ++ W+
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF-----QGTDHIDQWN 235
Query: 217 R 217
+
Sbjct: 236 K 236
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYE 72
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T S ++ VY
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 106
Query: 73 YMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL 131
M M + + +E D E +S+ + G+++LH +I+RDLK +NI+
Sbjct: 107 VMELMDANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIV 158
Query: 132 LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVL 191
+ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G ++
Sbjct: 159 VKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 192 LELITG 197
E+I G
Sbjct: 216 GEMIKG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVY 105
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 157
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G +
Sbjct: 158 VVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCI 214
Query: 191 LLELITG 197
+ E+I G
Sbjct: 215 MGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
V +K L+ + F M+S L H +LV G C GD+ +LV E++ GSL+ +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L+ ++ ++ ++++A A + +L +I+ ++ + NILL + + K +
Sbjct: 103 ---LKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
Query: 143 FGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITG 197
KL G + V + + + PE + K L L +D +SFG L E+ +G
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 19/185 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ D+ VAIK+L+ + + E++++ ++H N+++L+ T + L ++ Y
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP-QKTLEEFQDVY 105
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 106 LVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 157
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G +
Sbjct: 158 VVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCI 214
Query: 191 LLELI 195
+ E++
Sbjct: 215 MGEMV 219
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+++D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 32/202 (15%)
Query: 12 NVGLVWLCD-----QLVAIKQLNHEGLQ---GHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ G V LC Q A+K ++ ++ + + EV +L L H N++ L +
Sbjct: 44 SFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED 103
Query: 64 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 123
LV E G L D + ++ S +I G+ Y+H +++R
Sbjct: 104 KGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHR 156
Query: 124 DLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAMS 175
DLK N+LL++ D N ++ DFGL+ TH +GT Y APE +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPE-VLH 207
Query: 176 GKLTLKSDIYSFGVVLLELITG 197
G K D++S GV+L L++G
Sbjct: 208 GTYDEKCDVWSTGVILYILLSG 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 46 LSLLHHDNLVTLIGYC-TSGDQR----LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
L H N+V L+ C TS R LV+E++ L +L P P T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKD 116
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+ RGL++LH +++RDLK NIL+ + KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAP 170
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 210
V+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG--- 163
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 164 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
T Y APE ++ DI+S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG--- 163
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVA 204
Query: 164 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
T Y APE ++ DI+S G ++ EL+TGR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG--- 163
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGXVA 184
Query: 164 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
T Y APE ++ DI+S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG--- 163
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 164 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
T Y APE ++ DI+S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 157
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL EG++ + E+ + S L H N++ + Y + L+ E+ P G L L
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 87 EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA 146
E S ++A L Y H + VI+RD+K N+L+ K++DFG +
Sbjct: 109 GRFDEQRSATFMEELA----DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
Query: 147 KLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL-S 204
P + R M GT Y PE K D++ GV+ E + G D S
Sbjct: 162 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 205 KGQGEQNLVSWS---RPFLKDQKKFVHLVDPLLHGRYPRR 241
+ + +V+ PFL D K L+ LL P+R
Sbjct: 217 HTETHRRIVNVDLKFPPFLSDGSK--DLISKLLRYHPPQR 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL EG++ + E+ + S L H N++ + Y + L+ E+ P G L L
Sbjct: 52 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 109
Query: 87 EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA 146
E S ++A L Y H + VI+RD+K N+L+ K++DFG +
Sbjct: 110 GRFDEQRSATFMEELA----DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 162
Query: 147 KLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL-S 204
P + R M GT Y PE K D++ GV+ E + G D S
Sbjct: 163 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 217
Query: 205 KGQGEQNLVSWS---RPFLKDQKKFVHLVDPLLHGRYPRR 241
+ + +V+ PFL D K L+ LL P+R
Sbjct: 218 HTETHRRIVNVDLKFPPFLSDGSK--DLISKLLRYHPPQR 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y APE +S D ++ GV++ ++ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG--- 163
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 180
Query: 164 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
T Y APE ++ DI+S G ++ EL+TGR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 27 QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL 86
QL EG++ + E+ + S L H N++ + Y + L+ E+ P G L L
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 87 EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA 146
E S ++A L Y H + VI+RD+K N+L+ K++DFG +
Sbjct: 109 GRFDEQRSATFMEELA----DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
Query: 147 KLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL-S 204
P + R M GT Y PE K D++ GV+ E + G D S
Sbjct: 162 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 205 KGQGEQNLVSWS---RPFLKDQKKFVHLVDPLLHGRYPRR 241
+ + +V+ PFL D K L+ LL P+R
Sbjct: 217 HTETHRRIVNVDLKFPPFLSDGSK--DLISKLLRYHPPQR 254
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVY 105
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 157
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G +
Sbjct: 158 VVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCI 214
Query: 191 LLELITG 197
+ E+I G
Sbjct: 215 MGEMIKG 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 46 LSLLHHDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
L H N+V L+ C + D+ + LV+E++ L +L P P T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKD 116
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+ RGL++LH +++RDLK NIL+ + KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDP 170
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 210
V+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 38 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 93
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 94 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 145
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 146 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 201
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 202 KENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 39 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 95 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 202
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 40 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 96 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 147
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 203
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 204 KENVDIWSVGCIMGEMVRHK 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ D+GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 77 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 133 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 184
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 185 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 240
Query: 179 TLKSDIYSFGVVLLELI 195
DI+S G ++ E++
Sbjct: 241 KENVDIWSVGCIMGEMV 257
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+ + EV +L L H N++ L + LV E G L D + ++ S
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEV 150
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGD 153
+I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+
Sbjct: 151 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 200
Query: 154 NTHVSTR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
TH +GT Y APE + G K D++S GV+L L++G
Sbjct: 201 -THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y
Sbjct: 48 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVY 106
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 107 IVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 158
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G +
Sbjct: 159 VVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCI 215
Query: 191 LLELITG 197
+ E+I G
Sbjct: 216 MGEMIKG 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 39 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 95 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 202
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 40 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 96 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 147
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 203
Query: 179 TLKSDIYSFGVVLLELI 195
DI+S G ++ E++
Sbjct: 204 KENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 33 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 89 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 140
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 196
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 197 KENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 32 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 88 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 139
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 140 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 195
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 196 KENVDIWSVGCIMGEMVRHK 215
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+ + EV +L L H N++ L + LV E G L D + ++ S
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEV 126
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGD 153
+I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+
Sbjct: 127 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 176
Query: 154 NTHVSTR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
TH +GT Y APE + G K D++S GV+L L++G
Sbjct: 177 -THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 28/107 (26%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS--------- 158
L Y+H + +I+RDLK NI +D N K+ DFGLAK N H S
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQ 178
Query: 159 ---------TRVMGTYGYCAPEY-AMSGKLTLKSDIYSFGVVLLELI 195
T +GT Y A E +G K D+YS G++ E+I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVY 105
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 157
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + ++ V+ Y Y APE + DI+S G +
Sbjct: 158 VVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCI 214
Query: 191 LLELITG 197
+ E+I G
Sbjct: 215 MGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH 82
V +K L+ + F M+S L H +LV G C GD+ +LV E++ GSL+ +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 83 LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSD 142
L+ ++ ++ ++++A A + +L +I+ ++ + NILL + + K +
Sbjct: 103 ---LKKNKNCINILWKLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
Query: 143 FGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITG 197
KL G + V + + + PE + K L L +D +SFG L E+ +G
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 14 GLVW-----LCDQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLH-HDNLVTLIGYCTSG 64
G+VW ++VA+K++ + Q Q E+++L+ L H+N+V L+ +
Sbjct: 23 GIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD 81
Query: 65 DQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 122
+ R LV++YM + H EP+ + + + ++YLH +++
Sbjct: 82 NDRDVYLVFDYM---ETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG---LLH 132
Query: 123 RDLKSANILLDNDFNPKLSDFGLAK----LGPVGDNTHVS---------------TRVMG 163
RD+K +NILL+ + + K++DFGL++ + V +N +S T +
Sbjct: 133 RDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVA 192
Query: 164 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
T Y APE + S K T D++S G +L E++ G+
Sbjct: 193 TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 33 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 89 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 140
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 196
Query: 179 TLKSDIYSFGVVLLELITGR 198
DI+S G ++ E++ +
Sbjct: 197 KENVDIWSVGCIMGEMVRHK 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+ + EV +L L H N++ L + LV E G L D + ++ S
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEV 149
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGD 153
+I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+
Sbjct: 150 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 199
Query: 154 NTHVSTR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
TH +GT Y APE + G K D++S GV+L L++G
Sbjct: 200 -THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 6 LSCKFYNVGLVWLCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 63
+ C Y+ L D+ VAIK+L+ + + E++++ ++H N+++L+ T
Sbjct: 77 IVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 64 GDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 118
+ L ++ Y+ M ++ +L +E D E +S+ + G+++LH
Sbjct: 133 -QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 184
Query: 119 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 178
+I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y Y APE +
Sbjct: 185 -IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGY 240
Query: 179 TLKSDIYSFGVVLLELI 195
DI+S G ++ E++
Sbjct: 241 KENVDIWSVGCIMGEMV 257
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 46 LSLLHHDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
L H N+V L+ C + D+ + LV+E++ L +L P P T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKD 116
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 160
+ RGL++LH +++RDLK NIL+ + KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFP 170
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 210
V+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS--GDQRLLVYEYMPMG 77
D +V + ++ + ++F E L + H N++ ++G C S L+ +MP G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94
Query: 78 SLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRD-LKSANILLD 133
SL + L++ DQ + +K A+ ARG+ +LH P+I R L S ++++D
Sbjct: 95 SLYNVLHEGTNFVVDQ-----SQAVKFALDMARGMAFLHTLE--PLIPRHALNSRSVMID 147
Query: 134 NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT----LKSDIYSFGV 189
D ++S + V + R M + APE A+ K +D++SF V
Sbjct: 148 EDMTARIS------MADVKFSFQSPGR-MYAPAWVAPE-ALQKKPEDTNRRSADMWSFAV 199
Query: 190 VLLELITGRKAM-DLSKGQ-GEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAV 247
+L EL+T DLS + G + + RP + P +
Sbjct: 200 LLWELVTREVPFADLSNMEIGMKVALEGLRPTI------------------PPGISPHVS 241
Query: 248 AVTAMCLNEEANFRPLINDIVVALDYL 274
+ +C+NE+ RP + IV L+ +
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL---EDHLYDLEPDQEP 92
+ +F E+ +++ + ++ +T G T+ D+ ++YEYM S+ +++ + L+ +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 93 LSWNTRMKIAVGAA-RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV 151
+K + + Y+H + N + +RD+K +NIL+D + KLSDFG ++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY--M 202
Query: 152 GDNTHVSTRVMGTYGYCAPEY--AMSGKLTLKSDIYSFGVVL 191
D +R GTY + PE+ S K DI+S G+ L
Sbjct: 203 VDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 22 LVAIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
+VA+K Q+ EG++ + E+ + + LHH N++ L Y + L+ EY P
Sbjct: 50 IVALKVLFKSQIEKEGVE--HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPR 107
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGA--ARGLEYLHCKANPPVIYRDLKSANILLDN 134
G L L Q+ +++ + + A L Y H K VI+RD+K N+LL
Sbjct: 108 GELYKEL------QKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGL 158
Query: 135 DFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLE 193
K++DFG + P + + M GT Y PE K D++ GV+ E
Sbjct: 159 KGELKIADFGWSVHAPS-----LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYE 213
Query: 194 LITG 197
L+ G
Sbjct: 214 LLVG 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DFGL + +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 90 QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+EP++ + + ARG+E+L + I+RDL + NILL + K+ DFGLA+
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 150 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+ + APE + KSD++S+GV+L E+ +
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLL-HHDNLVTLIGYCTS-GDQRLLVYEYMPM 76
+ VA+K L EG ++ + E+ +L+ + HH N+V L+G CT G +++ EY
Sbjct: 58 RTVAVKMLK-EGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKY 116
Query: 77 GSLEDHL 83
G+L ++L
Sbjct: 117 GNLSNYL 123
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +S+L H LV L ++ +++YE+M G L + + D + +S + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEY 260
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--KLSDFGL-AKLGPVGDNTHVS 158
+GL ++H ++ DLK NI+ + KL DFGL A L P + V+
Sbjct: 261 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVT 316
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T GT + APE A + +D++S GV+ L++G
Sbjct: 317 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +S+L H LV L ++ +++YE+M G L + + D + +S + ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEY 154
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--KLSDFGL-AKLGPVGDNTHVS 158
+GL ++H ++ DLK NI+ + KL DFGL A L P + V+
Sbjct: 155 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVT 210
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T GT + APE A + +D++S GV+ L++G
Sbjct: 211 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT Y AP +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 110
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 111 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 165
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 113
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 114 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 168
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 115
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 116 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 170
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 110
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 111 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 165
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 107
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 108 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 162
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 112
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 113 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 167
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDL 138
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 139 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 193
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 10 FYNVGLVWL--CDQLVAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDN-LVTLIGYCTSGD 65
F V +V L D++ A+K LN E L+ + L++ D+ +T + Y D
Sbjct: 87 FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146
Query: 66 QRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 121
L LV +Y G L L E P++ + M IA+ + L Y+H
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH-------- 198
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-----G 176
RD+K NIL+D + + +L+DFG + L + D T S+ +GT Y +PE + G
Sbjct: 199 -RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 177 KLTLKSDIYSFGVVLLELITGR 198
+ + D +S GV + E++ G
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE 278
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--Y 73
+ ++ VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y
Sbjct: 49 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVY 107
Query: 74 MPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
+ M ++ +L +E D E +S+ + G+++LH +I+RDLK +NI
Sbjct: 108 IVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNI 159
Query: 131 LLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
++ +D K+ DFGLA+ G + + V+ Y Y APE + DI+S G +
Sbjct: 160 VVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCI 216
Query: 191 LLELITG 197
+ E+I G
Sbjct: 217 MGEMIKG 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 18 LCDQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L Q A K +N + L HQ+ E + LL H N+V L + L+++ +
Sbjct: 45 LAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVT 104
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
G L + + E E + + +I LHC V++RDLK N+LL +
Sbjct: 105 GGELFEDIVAREYYSEADASHCIQQILEAV------LHCH-QMGVVHRDLKPENLLLASK 157
Query: 136 FNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
KL+DFGLA V GT GY +PE D+++ GV+L
Sbjct: 158 LKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 215
Query: 193 ELITG 197
L+ G
Sbjct: 216 ILLVG 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 37 QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 96
+ + EV +L L H N+ L + LV E G L D + ++ S
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEV 126
Query: 97 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGD 153
+I G+ Y H +++RDLK N+LL++ D N ++ DFGL+
Sbjct: 127 DAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 176
Query: 154 NTHVSTR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
TH +GT Y APE + G K D++S GV+L L++G
Sbjct: 177 -THFEASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ FGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 44 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++L H N++TL G +V E G L D + Q+ S +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLF 123
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 159
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXT 179
Query: 160 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T + APE DI+S GV+L +TG
Sbjct: 180 PCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 14 GLVWLCD-----QLVAIKQLNHEGLQGHQEFIV------EVLMLSLLHHDNLVTLIGYCT 62
G+V+ C Q+VAIK+ L+ + ++ E+ ML L H NLV L+
Sbjct: 17 GVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR 72
Query: 63 SGDQRLLVYEYMPMGSLEDH--LYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 120
+ LV+EY DH L++L+ Q + + I + + + H K N
Sbjct: 73 RKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH-KHN--C 123
Query: 121 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKLT 179
I+RD+K NIL+ KL DFG A+L G + + V T Y +PE + +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLVGDTQYG 181
Query: 180 LKSDIYSFGVVLLELITG 197
D+++ G V EL++G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 106 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 165
+G++Y+H K +I RDLK +NI L + K+ DFGL N R GT
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKRXRSKGTL 185
Query: 166 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
Y +PE S + D+Y+ G++L EL+
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
++V +KQ+ H + E +L ++ LV L +V EY+ G +
Sbjct: 78 KVVKLKQIEHT--------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
HL + EP + +I + EYLH +IYRDLK N+L+D ++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 141 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+DFG AK V R GT APE +S D ++ GV++ E+ G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDL 110
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 111 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 165
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+++ + APE + T SD++ FGV + E++
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ DF LA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNT 97
E+ +L LL H+N+V LI C + + P + +Y + E D L N
Sbjct: 66 EIKILQLLKHENVVNLIEICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNV 117
Query: 98 RMKIAVGAAR--------GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+K + + GL Y+H +++RD+K+AN+L+ D KL+DFGLA+
Sbjct: 118 LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 150 PVGDNTHVS---TRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSK 205
+ N+ + RV+ T Y PE + + D++ G ++ E+ T M +
Sbjct: 175 SLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
Query: 206 GQGEQNLVS 214
Q + L+S
Sbjct: 234 EQHQLALIS 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +L + H+N+VTL S LV + + G L D + + E +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE----KDASLV 111
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNPKL--SDFGLAKLGPVGDNTHVS 158
++YLH +++RDLK N+L L + N K+ +DFGL+K+ G +
Sbjct: 112 IQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IM 164
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT GY APE + D +S GV+ L+ G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K + L ++F+ E +++ L H ++V LIG + ++ E P G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 97
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L E ++ L T + ++ + + YL + ++RD+ NIL+ + KL
Sbjct: 98 YL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 151
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRK 199
DFGL++ D S + + +PE + T SD++ F V + E+++ K
Sbjct: 152 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNT 97
E+ +L LL H+N+V LI C + + P + +Y + E D L N
Sbjct: 67 EIKILQLLKHENVVNLIEICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNV 118
Query: 98 RMKIAVGAAR--------GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+K + + GL Y+H +++RD+K+AN+L+ D KL+DFGLA+
Sbjct: 119 LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 150 PVGDNTHVS---TRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSK 205
+ N+ + RV+ T Y PE + + D++ G ++ E+ T M +
Sbjct: 176 SLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 206 GQGEQNLVS 214
Q + L+S
Sbjct: 235 EQHQLALIS 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDL 490
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T
Sbjct: 491 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 545
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNT 97
E+ +L LL H+N+V LI C + + P + +Y + E D L N
Sbjct: 67 EIKILQLLKHENVVNLIEICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNV 118
Query: 98 RMKIAVGAAR--------GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+K + + GL Y+H +++RD+K+AN+L+ D KL+DFGLA+
Sbjct: 119 LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 150 PVGDNTHVS---TRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSK 205
+ N+ + RV+ T Y PE + + D++ G ++ E+ T M +
Sbjct: 176 SLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 206 GQGEQNLVS 214
Q + L+S
Sbjct: 235 EQHQLALIS 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ Q A+K + + EV ML H N++ LI + D+ LV+E M
Sbjct: 36 ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD--N 134
GS+ H++ E L + + A L++LH N + +RDLK NIL + N
Sbjct: 96 GSILSHIHKRRHFNE-LEASV---VVQDVASALDFLH---NKGIAHRDLKPENILCEHPN 148
Query: 135 DFNP-KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCAPEY--AMSGKLTL---KSD 183
+P K+ DFGL + GD + +ST + G+ Y APE A S + ++ + D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 184 IYSFGVVLLELITG 197
++S GV+L L++G
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNT 97
E+ +L LL H+N+V LI C + + P + +Y + E D L N
Sbjct: 67 EIKILQLLKHENVVNLIEICRT--------KASPYNRCKASIYLVFDFCEHDLAGLLSNV 118
Query: 98 RMKIAVGAAR--------GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 149
+K + + GL Y+H +++RD+K+AN+L+ D KL+DFGLA+
Sbjct: 119 LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 150 PVGDNTHVS---TRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSK 205
+ N+ + RV+ T Y PE + + D++ G ++ E+ T M +
Sbjct: 176 SLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 206 GQGEQNLVS 214
Q + L+S
Sbjct: 235 EQHQLALIS 243
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 60 YCTSGDQRLL--VYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 115
+C D + L V EYMP G L + + YD+ P W V A L+ +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-----PEKWAKFYTAEVVLA--LDAIHSM 193
Query: 116 ANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+I+RD+K N+LLD + KL+DFG K+ G H T V GT Y +PE
Sbjct: 194 G---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTAV-GTPDYISPEVLK 248
Query: 175 S----GKLTLKSDIYSFGVVLLELITG 197
S G + D +S GV L E++ G
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K + L ++F+ E +++ L H ++V LIG + ++ E P G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 113
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L E ++ L T + ++ + + YL + ++RD+ NIL+ + KL
Sbjct: 114 YL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 167
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL++ D S + + +PE + T SD++ F V + E+++
Sbjct: 168 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L L H N++ L + LV E G L D + ++ S I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVI 126
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVS 158
G YLH K N +++RDLK N+LL++ D K+ DFGL+ VG
Sbjct: 127 MKQVLSGTTYLH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 180
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+GT Y APE + K K D++S GV+L L+ G
Sbjct: 181 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 23 VAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
VA+K + L ++F+ E +++ L H ++V LIG + ++ E P G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 101
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 141
+L E ++ L T + ++ + + YL + ++RD+ NIL+ + KL
Sbjct: 102 YL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 155
Query: 142 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
DFGL++ D S + + +PE + T SD++ F V + E+++
Sbjct: 156 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 44 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++L H N++TL G LV E M G L D + Q+ S +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLH 128
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 159
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 129 TIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT 184
Query: 160 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T + APE DI+S G++L ++ G
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 24 AIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
A K +N + L HQ+ E + LL H N+V L + LV++ + G L +
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--- 138
+ E E + + +I LHC V++RDLK N+LL +
Sbjct: 93 DIVAREYYSEADASHCIQQILEAV------LHCH-QMGVVHRDLKPENLLLASKCKGAAV 145
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
KL+DFGLA V + GT GY +PE DI++ GV+L L+ G
Sbjct: 146 KLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 158
+ I + A +E+LH K +++RDLK +NI D K+ DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 159 TRVM----------GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
M GT Y +PE + K DI+S G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
E L D+E ++ P L+ + + A+G+E+L A+ I+RDL + NILL
Sbjct: 168 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 224
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
K+ DFGLA+ + + APE T++SD++SFGV+L
Sbjct: 225 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 284
Query: 193 ELIT 196
E+ +
Sbjct: 285 EIFS 288
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 78 SLEDHL 83
+L +L
Sbjct: 111 NLSTYL 116
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 166
RGL+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 167 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 198
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGS 78
VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y+ M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMEL 110
Query: 79 LEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
++ +L +E D E +S+ + G+++LH +I+RDLK +NI++ +D
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLA+ G + + V+ Y Y APE + DI+S G ++ E++
Sbjct: 163 CTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
E L D+E ++ P L+ + + A+G+E+L A+ I+RDL + NILL
Sbjct: 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 226
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
K+ DFGLA+ + + APE T++SD++SFGV+L
Sbjct: 227 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 286
Query: 193 ELIT 196
E+ +
Sbjct: 287 EIFS 290
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 78 SLEDHL 83
+L +L
Sbjct: 113 NLSTYL 118
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 44 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 103
++L H N++TL G LV E M G L D + Q+ S +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLH 128
Query: 104 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 159
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 129 TIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT 184
Query: 160 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
T + APE DI+S G++L ++ G
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVS------ 158
R ++ LH VI+RDLK +N+L++++ + K+ DFGLA++ DN+ +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 159 TRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
T + T Y APE + S K + D++S G +L EL R
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
E L D+E ++ P L+ + + A+G+E+L A+ I+RDL + NILL
Sbjct: 175 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 231
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
K+ DFGLA+ + + APE T++SD++SFGV+L
Sbjct: 232 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 291
Query: 193 ELIT 196
E+ +
Sbjct: 292 EIFS 295
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 78 SLEDHL 83
+L +L
Sbjct: 118 NLSTYL 123
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
EV +L L H N++ L + LV E G L D + L + MK
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQ 112
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVS 158
+ G YLH K N +++RDLK N+LL++ D K+ DFGL+ VG
Sbjct: 113 VLS---GTTYLH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 163
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+GT Y APE + K K D++S GV+L L+ G
Sbjct: 164 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
E L D+E ++ P L+ + + A+G+E+L A+ I+RDL + NILL
Sbjct: 177 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 233
Query: 133 DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 192
K+ DFGLA+ + + APE T++SD++SFGV+L
Sbjct: 234 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 293
Query: 193 ELIT 196
E+ +
Sbjct: 294 EIFS 297
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 QLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLVTLIGYCTS-GDQRLLVYEYMPMG 77
+ VA+K L H+ + E+ +++ + HH N+V L+G CT G +++ E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 78 SLEDHL 83
+L +L
Sbjct: 120 NLSTYL 125
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDL 110
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ KL DFGL++ + D+T
Sbjct: 111 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDST 165
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 107 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVS------ 158
R ++ LH VI+RDLK +N+L++++ + K+ DFGLA++ DN+ +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 159 TRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
T + T Y APE + S K + D++S G +L EL R
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L H N++ L + + LV E + G L D + + E + + +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 101 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 157
I A YLH +++RDLK N+L D K++DFGL+K + ++ +
Sbjct: 157 ILEAVA----YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVL 206
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
V GT GYCAPE + D++S G++ L+ G
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 32/121 (26%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS--------- 158
L Y+H + +I+R+LK NI +D N K+ DFGLAK N H S
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQ 178
Query: 159 ---------TRVMGTYGYCAPEY-AMSGKLTLKSDIYSFGVVLLELI----TGRKAMDLS 204
T +GT Y A E +G K D YS G++ E I TG + +++
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNIL 238
Query: 205 K 205
K
Sbjct: 239 K 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 99 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK----------- 147
+ I + A +E+LH K +++RDLK +NI D K+ DFGL
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 148 LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
L P+ + +V GT Y +PE + K DI+S G++L EL+
Sbjct: 178 LTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 21 QLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
++VA+K++ + EG+ + E+ +L L H N+V L S + LV+E+
Sbjct: 28 EIVALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
L+ + D +P +GL + H + V++RDLK N+L++ +
Sbjct: 86 -DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNG 138
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELI 195
KL+DFGLA+ G + + T Y P+ KL S D++S G + EL
Sbjct: 139 ELKLADFGLARA--FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
Query: 196 TGRKAM 201
+ +
Sbjct: 197 NAARPL 202
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
++F+ E L + H ++V LIG T + ++ E +G L L + + L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDL 490
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT 155
+ + A + L YL K ++RD+ + N+L+ KL DFGL++ + D+T
Sbjct: 491 ASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDST 545
Query: 156 HV-STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
+ +++ + APE + T SD++ FGV + E++
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGS 78
VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y+ M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMEL 110
Query: 79 LEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
++ +L +E D E +S+ + G+++LH +I+RDLK +NI++ +D
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLA+ G + + V+ Y Y APE + D++S G ++ E++
Sbjct: 163 CTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGS 78
VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y+ M
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMEL 115
Query: 79 LEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
++ +L +E D E +S+ + G+++LH +I+RDLK +NI++ +D
Sbjct: 116 MDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSD 167
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLA+ G + ++ V+ Y Y APE + D++S G ++ E++
Sbjct: 168 CTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 55 VTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIAVGAARGLEY 111
V + Y D+ L +V EYMP G L + + YD+ P++ + + +A+ A + +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGF 194
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVSTRVMGTYGY 167
+H RD+K N+LLD + KL+DFG + K G V +T V GT Y
Sbjct: 195 IH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDY 240
Query: 168 CAPEYAMS----GKLTLKSDIYSFGVVLLELITG 197
+PE S G + D +S GV L E++ G
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 55 VTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIAVGAARGLEY 111
V + Y D+ L +V EYMP G L + + YD+ P++ + + +A+ A + +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGF 189
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVSTRVMGTYGY 167
+H RD+K N+LLD + KL+DFG + K G V +T V GT Y
Sbjct: 190 IH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDY 235
Query: 168 CAPEYAMS----GKLTLKSDIYSFGVVLLELITG 197
+PE S G + D +S GV L E++ G
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 55 VTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIAVGAARGLEY 111
V + Y D+ L +V EYMP G L + + YD+ P++ + + +A+ A + +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGF 194
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVSTRVMGTYGY 167
+H RD+K N+LLD + KL+DFG + K G V +T V GT Y
Sbjct: 195 IH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDY 240
Query: 168 CAPEYAMS----GKLTLKSDIYSFGVVLLELITG 197
+PE S G + D +S GV L E++ G
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
Q A K +N + L HQ+ E + LL H N+V L + LV++ + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL-HCKANPPVIYRDLKSANILLDNDFN 137
L + + E E + + +I LE + HC N +++RDLK N+LL +
Sbjct: 90 LFEDIVAREYYSEADASHCIQQI-------LESVNHCHLNG-IVHRDLKPENLLLASKSK 141
Query: 138 P---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
KL+DFGLA V + GT GY +PE D+++ GV+L L
Sbjct: 142 GAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 195 ITG 197
+ G
Sbjct: 200 LVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
Q A K +N + L HQ+ E + LL H N+V L + LV++ + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL-HCKANPPVIYRDLKSANILLDNDFN 137
L + + E E + + +I LE + HC N +++RDLK N+LL +
Sbjct: 90 LFEDIVAREYYSEADASHCIQQI-------LESVNHCHLNG-IVHRDLKPENLLLASKSK 141
Query: 138 P---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 194
KL+DFGLA V + GT GY +PE D+++ GV+L L
Sbjct: 142 GAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 195 ITG 197
+ G
Sbjct: 200 LVG 202
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E+ +L H+N++T+ Y+ ++ L+ + Q LS +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYF 117
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVST 159
R ++ LH VI+RDLK +N+L++++ + K+ DFGLA++ DN+ +
Sbjct: 118 IYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 160 RVMG------TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 198
+ G T Y APE + S K + D++S G +L EL R
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYE--YMPMGS 78
VAIK+L+ + + E++++ ++H N++ L+ T + L ++ Y+ M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMEL 104
Query: 79 LEDHL---YDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
++ +L +E D E +S+ + G+++LH +I+RDLK +NI++ +D
Sbjct: 105 MDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSD 156
Query: 136 FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
K+ DFGLA+ G + ++ V+ Y Y APE + D++S G ++ E++
Sbjct: 157 CTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDNLVTLIGYCTSGDQRLLVYEYMPM 76
+ Q A+K + + EV ML H N++ LI + D+ LV+E M
Sbjct: 36 ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD--N 134
GS+ H++ E L + + A L++LH N + +RDLK NIL + N
Sbjct: 96 GSILSHIHKRRHFNE-LEASV---VVQDVASALDFLH---NKGIAHRDLKPENILCEHPN 148
Query: 135 DFNP-KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCAPEY--AMSGKLTL---KSD 183
+P K+ DF L + GD + +ST + G+ Y APE A S + ++ + D
Sbjct: 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 184 IYSFGVVLLELITG 197
++S GV+L L++G
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
+L+ I++ N + L+ F EV+ H+N+V +G C S L + + G
Sbjct: 61 RLIDIERDNEDQLKA---FKREVMAYRQTRHENVVLFMGACMSPPH-LAIITSLCKGRT- 115
Query: 81 DHLYDLEPDQE-PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK 139
LY + D + L N +IA +G+ YLH K ++++DLKS N+ DN
Sbjct: 116 --LYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVV 169
Query: 140 LSDFGLAKLGPVGDNTHVSTRVMGTYGY---CAPEY-------AMSGKLTLK--SDIYSF 187
++DFGL + V ++ G+ APE KL SD+++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 188 GVVLLEL 194
G + EL
Sbjct: 230 GTIWYEL 236
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD-QEPL-SWNTR 98
+E+ +LS + H N++ ++ + LV E G D P EPL S+ R
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 99 MKI-AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 157
+ AVG YL K +I+RD+K NI++ DF KL DFG A G +
Sbjct: 138 QLVSAVG------YLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELI 195
GT YCAPE M +++S GV L L+
Sbjct: 189 ---FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 21 QLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
Q A K +N + L HQ+ E + LL H N+V L + LV++ + G
Sbjct: 57 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 79 LEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP 138
L + + E E + + +I LE ++ +++RDLK N+LL +
Sbjct: 117 LFEDIVAREYYSEADASHCIHQI-------LESVNHIHQHDIVHRDLKPENLLLASKCKG 169
Query: 139 ---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 195
KL+DFGLA V GT GY +PE DI++ GV+L L+
Sbjct: 170 AAVKLADFGLAI--EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILL 227
Query: 196 TG 197
G
Sbjct: 228 VG 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 36 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 95
HQ+ E + LL H N+V L + L+++ + G L + + E E +
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 113
Query: 96 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVG 152
+ +I LHC V++R+LK N+LL + KL+DFGLA V
Sbjct: 114 HCIQQILEAV------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVE 164
Query: 153 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
GT GY +PE D+++ GV+L L+ G
Sbjct: 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 21 QLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPM 76
++VA+K++ + EG+ + E+ +L L H N+V L S + LV+E+
Sbjct: 28 EIVALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85
Query: 77 GSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
L+ + D +P +GL + H + V++RDLK N+L++ +
Sbjct: 86 -DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNG 138
Query: 137 NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELI 195
KL++FGLA+ G + + T Y P+ KL S D++S G + EL
Sbjct: 139 ELKLANFGLARA--FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
Query: 196 TGRKAM 201
+ +
Sbjct: 197 NAGRPL 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 120 VIYRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 176
V++RDLK N+L +++ K+ DFG A+L P DN + T T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF-TLHYAAPELLNQN 184
Query: 177 KLTLKSDIYSFGVVLLELITGR 198
D++S GV+L +++G+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 55 VTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKIAVGAARGLE 110
+T + Y + L LV +Y G L L E P+ + M +A+ + L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
Y+H RD+K N+LLD + + +L+DFG + L D T S+ +GT Y +P
Sbjct: 196 YVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISP 245
Query: 171 EYAMS-----GKLTLKSDIYSFGVVLLELITGR 198
E + GK + D +S GV + E++ G
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 55 VTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKIAVGAARGLE 110
+T + Y + L LV +Y G L L E P+ + M +A+ + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 111 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
Y+H RD+K N+LLD + + +L+DFG + L D T S+ +GT Y +P
Sbjct: 212 YVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISP 261
Query: 171 EYAMS-----GKLTLKSDIYSFGVVLLELITGR 198
E + GK + D +S GV + E++ G
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 30/170 (17%)
Query: 42 EVLMLSLLHHDNLVTLIG--YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 99
E+ +L L H N++ L+ Y + +V EY G E + D P++ R
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEK-------RF 106
Query: 100 KIAVGAA------RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVG 152
+ GLEYLH + ++++D+K N+LL K+S G+A+ L P
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 153 DNTHVSTRVMGTYGYCAPEYA-----MSGKLTLKSDIYSFGVVLLELITG 197
+ T G+ + PE A SG K DI+S GV L + TG
Sbjct: 164 ADDTCRTS-QGSPAFQPPEIANGLDTFSG---FKVDIWSAGVTLYNITTG 209
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQG E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 193
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQG E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 193
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 19 CDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGS 78
++LVA+K + G + + E++ L H N+V + +V EY G
Sbjct: 43 ANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 79 LEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
L + + + D+ + + G+ Y H V +RDLK N LLD
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLIS-------GVSYAHAMQ---VAHRDLKLENTLLDGS 151
Query: 136 FNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVLL 192
P K++DFG +K + + +GT Y APE + + K +D++S GV L
Sbjct: 152 PAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLY 208
Query: 193 ELITG 197
++ G
Sbjct: 209 VMLVG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 49/267 (18%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS--GDQRLLVYEYMPMG 77
D +V + ++ + ++F E L + H N++ ++G C S L+ + P G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYG 94
Query: 78 SLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRD-LKSANILLD 133
SL + L++ DQ + +K A+ ARG +LH P+I R L S ++ +D
Sbjct: 95 SLYNVLHEGTNFVVDQ-----SQAVKFALDXARGXAFLHTLE--PLIPRHALNSRSVXID 147
Query: 134 NDFNPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT----LKSDIYSF 187
D ++S D + P R + APE A+ K +D +SF
Sbjct: 148 EDXTARISXADVKFSFQSP--------GRXYAP-AWVAPE-ALQKKPEDTNRRSADXWSF 197
Query: 188 GVVLLELITGRKAM-DLSKGQ-GEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNY 245
V+L EL+T DLS + G + + RP + P +
Sbjct: 198 AVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI------------------PPGISPH 239
Query: 246 AVAVTAMCLNEEANFRPLINDIVVALD 272
+ +C NE+ RP + IV L+
Sbjct: 240 VSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ +VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDVVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 195
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 122 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 181
+RD+K NIL+ D L DFG+A T + V GT Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 182 SDIYSFGVVLLELITG 197
+DIY+ VL E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 105 AARGLEYLHCKANPPVIYRDLKSANILLDNDFN-PKLSDFGLAK-LGP--VGDNTHVSTR 160
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 175 ALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE M K DI+S ++L ++ G
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 105 AARGLEYLHCKANPPVIYRDLKSANILLDNDFN-PKLSDFGLAK-LGP--VGDNTHVSTR 160
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 173 ALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE M K DI+S ++L ++ G
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 105 AARGLEYLHCKANPPVIYRDLKSANILLDNDFN-PKLSDFGLAK-LGP--VGDNTHVSTR 160
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 159 ALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 161 VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE M K DI+S ++L ++ G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQG E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVY-----EYMPMG--SLEDHLYDLEPDQEPLSWNTRMKIAV-GAARGLEYLHCKAN 117
++ VY +Y+P + H Y P+ + +K+ + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFG- 142
Query: 118 PPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 176
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 143 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGA 197
Query: 177 K-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 111
Query: 101 IAV------GAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 112 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 166
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 167 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 237
Query: 101 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 238 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 292
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 293 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 101 IAV------GAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 91 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF---NPKLSDFGLAK 147
E +S N +++ G+ YLH +++ DLK NILL + + + K+ DFG+++
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 148 LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 196
+G + +MGT Y APE +T +D+++ G++ L+T
Sbjct: 183 --KIGHACELR-EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 101 IAV------GAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 101 IAV------GAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 17/187 (9%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E + +L H ++V L+ +S +V+E+M L + S
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVS 158
L Y H + +I+RD+K N+LL +N KL DFG+A +G++ V+
Sbjct: 136 MRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVA 190
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG---------RKAMDLSKGQGE 209
+GT + APE D++ GV+L L++G R + KG+ +
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK 250
Query: 210 QNLVSWS 216
N WS
Sbjct: 251 MNPRQWS 257
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNP-----KLSDFGLAK-----LGPVGDNTHV 157
G+ YLH V++RDLK ANIL+ + P K++D G A+ L P+ D
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLAD---- 191
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS 216
V+ T+ Y APE + + K+ DI++ G + EL+T Q + S
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF-----HCRQEDIKTS 246
Query: 217 RPFLKDQ 223
P+ DQ
Sbjct: 247 NPYHHDQ 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 66 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 227
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 118
Query: 101 IAV------GAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 119 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 173
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 174 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 60 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 115
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 116 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 221
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 41 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 100
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 251
Query: 101 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 151
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 252 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 306
Query: 152 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 197
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 307 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 68 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 123
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 124 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 229
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 193
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 45 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 100
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 101 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 206
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 70 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 125
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 126 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 231
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
++LVA+K + G + + E++ L H N+V + +V EY G L
Sbjct: 43 NELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 80 EDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
+ + + D+ + + G+ Y H V +RDLK N LLD
Sbjct: 102 FERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ---VCHRDLKLENTLLDGSP 151
Query: 137 NPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVLLE 193
P+L DFG +K + + +GT Y APE + + K +D++S GV L
Sbjct: 152 APRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 208
Query: 194 LITG 197
++ G
Sbjct: 209 MLVG 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 37 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 92
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 93 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 198
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 38/207 (18%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 111 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 166
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 167 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEY 172
+ +RD+K N+LLD D KL DFG AK G+ +++ +R Y APE
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPEL 272
Query: 173 AMSGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 33 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 88
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 89 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 196
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E++ + L +V L G G + E + GSL L +Q L + +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPEDRALYY 171
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAK-LGP--VGDNTHV 157
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 172 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE + K D++S ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 66 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ +VS + Y Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSX-ICSRY-YRAPELIF 229
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 195
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 195
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 51 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 106
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 107 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 214
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 44 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 207
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 44 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 207
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 40 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 95
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 96 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 203
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 12 NVGLVW---LCD--QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL-IGYCTSGD 65
+ G+V+ LCD +LVAIK++ LQ + E+ ++ L H N+V L + +SG+
Sbjct: 36 SFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 91
Query: 66 QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA----------RGLEYLHCK 115
++ VY + + + + +Y + +R K + R L Y+H
Sbjct: 92 KKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 116 ANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 174
+ +RD+K N+LLD D KL DFG AK G+ + + + Y APE
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIF 199
Query: 175 SGK-LTLKSDIYSFGVVLLELITGR 198
T D++S G VL EL+ G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E++ + L +V L G G + E + GSL L +Q L + +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL----GQLVKEQGCLPEDRALYY 190
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAK-LGP--VGDNTHV 157
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 191 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 158 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
+ GT + APE + K D++S ++L ++ G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 18 LCDQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMG 77
L +LVA+K + G + E++ L H N+V + ++ EY G
Sbjct: 43 LTKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101
Query: 78 SLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 134
L + + + D+ + + G+ Y H + +RDLK N LLD
Sbjct: 102 ELYERICNAGRFSEDEARFFFQQLLS-------GVSYCHSMQ---ICHRDLKLENTLLDG 151
Query: 135 DFNPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVL 191
P+L DFG +K + + +GT Y APE + + K +D++S GV L
Sbjct: 152 SPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
Query: 192 LELITG 197
++ G
Sbjct: 209 YVMLVG 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 51 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 110
H ++ L+ + + + +LV E P+ + + L+D ++ PL ++
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 111 YLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 169
+ H + V++RD+K NIL+D KL DFG L + D + T GT Y
Sbjct: 154 HCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGAL--LHDEPY--TDFDGTRVYSP 206
Query: 170 PEYAMSGKL-TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVH 228
PE+ + L + ++S G++L +++ G PF +DQ+
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCG------------------DIPFERDQE---- 244
Query: 229 LVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV 269
+++ LH +P A+ CL + + RP + +I++
Sbjct: 245 ILEAELH--FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 18 LCDQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEY 73
+ ++ VAIK++ EG+ G I EV +L L H N++ L + L++EY
Sbjct: 57 VTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114
Query: 74 MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL- 132
L+ ++ D PD +S G+ + H + ++RDLK N+LL
Sbjct: 115 AE-NDLKKYM-DKNPD---VSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLS 166
Query: 133 --DNDFNP--KLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIY 185
D P K+ DFGLA+ G P+ TH + T Y PE + + + DI+
Sbjct: 167 VSDASETPVLKIGDFGLARAFGIPIRQFTH----EIITLWYRPPEILLGSRHYSTSVDIW 222
Query: 186 SFGVVLLELI 195
S + E++
Sbjct: 223 SIACIWAEML 232
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEYM-PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E M P+ L D + + QE L+ + ++ + A R
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 128
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 129 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 182
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 24 AIKQLNHEGLQGH--QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
A K +N + L Q+ E + L H N+V L LV++ + G L +
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--- 138
+ E E + + +I A +C +N +++R+LK N+LL +
Sbjct: 95 DIVAREFYSEADASHCIQQILESIA------YCHSNG-IVHRNLKPENLLLASKAKGAAV 147
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
KL+DFGLA + H GT GY +PE + DI++ GV+L L+ G
Sbjct: 148 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 82/202 (40%), Gaps = 36/202 (17%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK++N E L + + E+ +L+ L D ++ L D Y+ + +
Sbjct: 54 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD 113
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L L L+ I G ++H +I+RDLK AN LL+ D + K+
Sbjct: 114 SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKV 170
Query: 141 SDFGLAKL-------------------GPVGDN------THVSTRVMGTYGYCAPEYAMS 175
DFGLA+ GP N +HV TR Y APE +
Sbjct: 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILL 225
Query: 176 GKLTLKS-DIYSFGVVLLELIT 196
+ KS DI+S G + EL+
Sbjct: 226 QENYTKSIDIWSTGCIFAELLN 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 4 CYLSCKFYNVGLVWLCDQL-------VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVT 56
Y +CK G + Q VAIK++ LQ + E+ ++ ++ H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVD 96
Query: 57 LIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI----AVGAARGLEY 111
L + ++GD++ V+ + + + + +Y L M + R L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
+H + +RD+K N+LLD KL DFG AK+ G+ + + Y Y AP
Sbjct: 157 IHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSRY-YRAP 210
Query: 171 EYAMSG-KLTLKSDIYSFGVVLLELITGR 198
E T DI+S G V+ EL+ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
++LVA+K + G + E++ L H N+V + +V EY G L
Sbjct: 44 NELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 80 EDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
+ + + D+ + + G+ Y H V +RDLK N LLD
Sbjct: 103 FERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ---VCHRDLKLENTLLDGSP 152
Query: 137 NPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVLLE 193
P+L DFG +K + + +GT Y APE + + K +D++S GV L
Sbjct: 153 APRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 194 LITG 197
++ G
Sbjct: 210 MLVG 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 24 AIKQLNHEGLQGH--QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
A K +N + L Q+ E + L H N+V L LV++ + G L +
Sbjct: 34 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 93
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--- 138
+ E E + + +I A +C +N +++R+LK N+LL +
Sbjct: 94 DIVAREFYSEADASHCIQQILESIA------YCHSNG-IVHRNLKPENLLLASKAKGAAV 146
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
KL+DFGLA + H GT GY +PE + DI++ GV+L L+ G
Sbjct: 147 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 24 AIKQLNHEGLQGH--QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
A K +N + L Q+ E + L H N+V L LV++ + G L +
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--- 138
+ E E + + +I A +C +N +++R+LK N+LL +
Sbjct: 95 DIVAREFYSEADASHCIQQILESIA------YCHSNG-IVHRNLKPENLLLASKAKGAAV 147
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
KL+DFGLA + H GT GY +PE + DI++ GV+L L+ G
Sbjct: 148 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
LH V++RDL NILL ++ + + DF LA+ N T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPE 203
Query: 172 YAMSGK-LTLKSDIYSFGVVLLELITGRKAM 201
M K T D++S G V+ E+ RKA+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 112 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
LH V++RDL NILL ++ + + DF LA+ N T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPE 203
Query: 172 YAMSGK-LTLKSDIYSFGVVLLELITGRKAM 201
M K T D++S G V+ E+ RKA+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 24 AIKQLNHEGLQGH--QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 81
A K +N + L Q+ E + L H N+V L LV++ + G L +
Sbjct: 58 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 117
Query: 82 HLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP--- 138
+ E E + + +I A +C +N +++R+LK N+LL +
Sbjct: 118 DIVAREFYSEADASHCIQQILESIA------YCHSNG-IVHRNLKPENLLLASKAKGAAV 170
Query: 139 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
KL+DFGLA V D + GT GY +PE + DI++ GV+L L+ G
Sbjct: 171 KLADFGLAI--EVND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 23 VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLE 80
VAIK++N E L + + E+ +L+ L D ++ L D Y+ + +
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD 115
Query: 81 DHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKL 140
L L L+ I G +++H +I+RDLK AN LL+ D + K+
Sbjct: 116 SDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKI 172
Query: 141 SDFGLAKL----------------------GPVGDN------THVSTRVMGTYGYCAPEY 172
DFGLA+ GP N +HV TR Y APE
Sbjct: 173 CDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPEL 227
Query: 173 A-MSGKLTLKSDIYSFGVVLLELITGRKA 200
+ T DI+S G + EL+ K+
Sbjct: 228 ILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 18 LCDQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMP 75
L ++VAIK++ E L + + E+ +L+ L+HD++V ++ D Y+
Sbjct: 76 LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVV 135
Query: 76 MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND 135
+ + L L+ + G++Y+H +++RDLK AN L++ D
Sbjct: 136 LEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQD 192
Query: 136 FNPKLSDFGLAK-------------LGPVGDNTHVST---------RVMG---TYGYCAP 170
+ K+ DFGLA+ + P D+ ++ T ++ G T Y AP
Sbjct: 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252
Query: 171 EYA-MSGKLTLKSDIYSFGVVLLELIT 196
E + T D++S G + EL+
Sbjct: 253 ELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 125 -HCH-NXGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 178
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
++LVA+K + G + + E++ L H N+V + +V EY G L
Sbjct: 44 NELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 80 EDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
+ + + D+ + + G+ Y H V +RDLK N LLD
Sbjct: 103 FERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ---VCHRDLKLENTLLDGSP 152
Query: 137 NPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVLLE 193
P+L FG +K + + +GT Y APE + + K +D++S GV L
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 194 LITG 197
++ G
Sbjct: 210 MLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 20/184 (10%)
Query: 20 DQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL 79
++LVA+K + G + + E++ L H N+V + +V EY G L
Sbjct: 44 NELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 80 EDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF 136
+ + + D+ + + G+ Y H V +RDLK N LLD
Sbjct: 103 FERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ---VCHRDLKLENTLLDGSP 152
Query: 137 NPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK-SDIYSFGVVLLE 193
P+L FG +K + +GT Y APE + + K +D++S GV L
Sbjct: 153 APRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 194 LITG 197
++ G
Sbjct: 210 MLVG 213
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPK-LSDFGLAKLGPVGDNTHVSTRVMGTYG 166
GL+Y+H + +I+ D+K N+L++ +P+ L +A LG T + T
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y +PE + +DI+S ++ ELITG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 125 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 178
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLDNDFNPK-LSDFGLAKLGPVGDNTHVSTRVMGTYG 166
GL+Y+H + +I+ D+K N+L++ +P+ L +A LG T + T
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 167 YCAPEYAMSGKLTLKSDIYSFGVVLLELITG 197
Y +PE + +DI+S ++ ELITG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 108 GLEYLHCKANPPVIYRDLKSANILLD-----NDFNPKLSDFGLAKLGPVGDNTHVSTR-- 160
GL +LH + +++RDLK NIL+ +SDFGL K VG ++ S R
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS-FSRRSG 185
Query: 161 VMGTYGYCAPEYAMSG---KLTLKSDIYSFGVVLLELIT 196
V GT G+ APE T DI+S G V +I+
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 127
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 128 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 182
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 109 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG-LAKLGPVGDNTHVSTRVMGTYGY 167
L +LH + +++ D+K ANI L KL DFG L +LG G G Y
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE----GDPRY 222
Query: 168 CAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSK-GQGEQNL 212
APE + G +D++S G+ +LE+ M+L G+G Q L
Sbjct: 223 MAPEL-LQGSYGTAADVFSLGLTILEVACN---MELPHGGEGWQQL 264
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 125 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 178
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 171
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 172 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 226
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 129
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 130 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 183
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 23 VAIKQLNHEG-------LQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR-----LLV 70
V +K L H G ++F+ EV+ H ++V + + D+ +V
Sbjct: 109 VVLKGLVHSGDAEAQAMAMAERQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIV 162
Query: 71 YEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANI 130
EY+ SL+ P E +++ + A L YLH ++Y DLK NI
Sbjct: 163 MEYVGGQSLKRSKGQKLPVAEAIAYLLEILPA------LSYLHSIG---LVYNDLKPENI 213
Query: 131 LLDNDFNPKLSDFG-LAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGV 189
+L + KL D G ++++ G + GT G+ APE +G T+ +DIY+ G
Sbjct: 214 MLTEE-QLKLIDLGAVSRINSFG-------YLYGTPGFQAPEIVRTGP-TVATDIYTVGR 264
Query: 190 VLLEL 194
L L
Sbjct: 265 TLAAL 269
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 128
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 129 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 182
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 145 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 198
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 129
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 130 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 183
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 171
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 172 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 226
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 152 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 206
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 171
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 172 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 226
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 156
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 157 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 143
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 144 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 197
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 143
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 144 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 197
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 156
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 157 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 157
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 158 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 156
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 157 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 145 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 198
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 156
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 157 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 157
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 158 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 157
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 158 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 53 NLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 111
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 112 LHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 170
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y P
Sbjct: 145 -HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPP 198
Query: 171 EYAMSGKLTLKS-DIYSFGVVLLELITG 197
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 54 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 112
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 157
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 158 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 130 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 184
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 164 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 218
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 113 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 171
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 177 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 231
Query: 172 YAMSGKLTLKS-DIYSFGVVLLELITG 197
+ + +S ++S G++L +++ G
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 23 VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQR-------LLVYEYMP 75
VAIK++ + ++E + + L++LHH N+V L Y + +R +V EY+P
Sbjct: 51 VAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109
Query: 76 --MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP--VIYRDLKSANIL 131
+ + Y + P+ I V + + + C P V +RD+K N+L
Sbjct: 110 DTLHRCCRNYYRRQVAPPPIL------IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL 163
Query: 132 LDN-DFNPKLSDFGLA-KLGPVGDN-THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSF 187
++ D KL DFG A KL P N ++ +R Y APE + T DI+S
Sbjct: 164 VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSV 218
Query: 188 GVVLLELITGRKAM--DLSKGQ 207
G + E++ G D S GQ
Sbjct: 219 GCIFAEMMLGEPIFRGDNSAGQ 240
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD------NLVTLIGYCTSGDQRLLVYEYM 74
Q VA+K + +E + H++ E+ +L L N++ ++ T + + +E +
Sbjct: 123 QHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181
Query: 75 PMGSLEDHLYDL--EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
M +LY+L + + S K A + L+ LH +I+ DLK NILL
Sbjct: 182 SM-----NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILL 233
Query: 133 DNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
K+ DFG + ++ V T + + Y APE + + + D++S G +
Sbjct: 234 KQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCI 288
Query: 191 LLELITG 197
L EL+TG
Sbjct: 289 LAELLTG 295
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 78 SLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 137
SLED L+DL + T + IA+ +EY+H K +IYRD+K N L+ N
Sbjct: 82 SLED-LFDL--CDRTFTLKTVLMIAIQLLSRMEYVHSKN---LIYRDVKPENFLIGRQGN 135
Query: 138 PK-----LSDFGLAK--LGPVGDNTHVSTR----VMGTYGYCAPEYAMSGKLTLKSDIYS 186
K + DFGLAK + P H+ R + GT Y + + + + + D+ +
Sbjct: 136 KKEHVIHIIDFGLAKEYIDPE-TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEA 194
Query: 187 FGVVLLELITG 197
G + + + G
Sbjct: 195 LGHMFMYFLRG 205
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 21 QLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD------NLVTLIGYCTSGDQRLLVYEYM 74
Q VA+K + +E + H++ E+ +L L N++ ++ T + + +E +
Sbjct: 123 QHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181
Query: 75 PMGSLEDHLYDL--EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILL 132
M +LY+L + + S K A + L+ LH +I+ DLK NILL
Sbjct: 182 SM-----NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILL 233
Query: 133 DNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVV 190
K+ DFG + ++ V T + + Y APE + + + D++S G +
Sbjct: 234 KQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCI 288
Query: 191 LLELITG 197
L EL+TG
Sbjct: 289 LAELLTG 295
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 42 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 101
E + +L H ++V L+ +S +V+E+M L + S
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 102 AVGAARGLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVS 158
L Y H + +I+RD+K +LL +N KL FG+A +G++ V+
Sbjct: 136 MRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVA 190
Query: 159 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG---------RKAMDLSKGQGE 209
+GT + APE D++ GV+L L++G R + KG+ +
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK 250
Query: 210 QNLVSWS 216
N WS
Sbjct: 251 MNPRQWS 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,319,460
Number of Sequences: 62578
Number of extensions: 387818
Number of successful extensions: 2965
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 745
Number of HSP's gapped (non-prelim): 1148
length of query: 311
length of database: 14,973,337
effective HSP length: 99
effective length of query: 212
effective length of database: 8,778,115
effective search space: 1860960380
effective search space used: 1860960380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)