Your job contains 1 sequence.
>021527
MAALQATTNFVHLKNPHAHYLPRLPCHKSTLSLKRFTPMAALTASPTVGLAETFTRLKKQ
GKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAR
GTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE
TESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQT
LLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELE
KFAKSLKSALP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021527
(311 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:3685290 - symbol:TSA1 "tryptophan synthase alp... 1175 2.3e-119 1
TAIR|locus:2132328 - symbol:AT4G02610 species:3702 "Arabi... 1095 6.8e-111 1
TIGR_CMR|GSU_2371 - symbol:GSU_2371 "tryptophan synthase,... 542 2.7e-52 1
TIGR_CMR|CHY_1581 - symbol:CHY_1581 "tryptophan synthase,... 515 2.0e-49 1
CGD|CAL0004378 - symbol:TRP5 species:5476 "Candida albica... 475 5.9e-45 1
UNIPROTKB|Q59KP3 - symbol:TRP5 "Likely tryptophan synthet... 475 5.9e-45 1
TIGR_CMR|BA_1254 - symbol:BA_1254 "tryptophan synthase, a... 471 9.1e-45 1
TIGR_CMR|SPO_0815 - symbol:SPO_0815 "tryptophan synthase,... 462 8.1e-44 1
TIGR_CMR|DET_1488 - symbol:DET_1488 "tryptophan synthase,... 456 3.5e-43 1
ASPGD|ASPL0000007723 - symbol:trpB species:162425 "Emeric... 456 1.1e-42 1
SGD|S000002994 - symbol:TRP5 "Tryptophan synthase" specie... 438 9.6e-41 1
TIGR_CMR|SO_3024 - symbol:SO_3024 "tryptophan synthase, a... 430 2.0e-40 1
UNIPROTKB|Q9KST7 - symbol:trpA "Tryptophan synthase alpha... 424 8.7e-40 1
TIGR_CMR|VC_1169 - symbol:VC_1169 "tryptophan synthase, a... 424 8.7e-40 1
UNIPROTKB|P0A877 - symbol:trpA species:83333 "Escherichia... 422 1.4e-39 1
UNIPROTKB|P00929 - symbol:trpA "Tryptophan synthase alpha... 422 1.4e-39 1
TIGR_CMR|CBU_1156 - symbol:CBU_1156 "tryptophan synthase,... 415 7.8e-39 1
UNIPROTKB|P66980 - symbol:trpA "Tryptophan synthase alpha... 398 4.9e-37 1
TIGR_CMR|CJE_0398 - symbol:CJE_0398 "tryptophan synthase,... 395 1.0e-36 1
TIGR_CMR|CPS_3527 - symbol:CPS_3527 "tryptophan synthase,... 394 1.3e-36 1
POMBASE|SPAC19A8.15 - symbol:trp2 "tryptophan synthase (p... 374 9.8e-34 1
>TAIR|locus:3685290 [details] [associations]
symbol:TSA1 "tryptophan synthase alpha chain"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0052544 "defense response by callose deposition in cell wall"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006569
"tryptophan catabolic process" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009627 "systemic acquired
resistance" evidence=RCA] [GO:0009684 "indoleacetic acid
biosynthetic process" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0016045
"detection of bacterium" evidence=RCA] [GO:0031347 "regulation of
defense response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0043900 "regulation
of multi-organism process" evidence=RCA] [GO:0050776 "regulation of
immune response" evidence=RCA] [GO:0050832 "defense response to
fungus" evidence=RCA] [GO:0000162 "tryptophan biosynthetic process"
evidence=IDA;TAS] [GO:0004834 "tryptophan synthase activity"
evidence=IGI;IDA] [GO:0009630 "gravitropism" evidence=IMP]
HAMAP:MF_00131 InterPro:IPR002028 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167
UniPathway:UPA00035 GO:GO:0009570 EMBL:CP002686 Gene3D:3.20.20.70
GO:GO:0042742 GO:GO:0052544 GO:GO:0009630 EMBL:AL138656
GO:GO:0009851 SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159
HOGENOM:HOG000223816 KO:K01695 ProtClustDB:PLN02591 GO:GO:0033984
TIGRFAMs:TIGR00262 EMBL:U18993 EMBL:BT025875 EMBL:AK226413
EMBL:AY087980 IPI:IPI00523510 PIR:S59519 RefSeq:NP_567004.1
UniGene:At.24508 HSSP:P00929 ProteinModelPortal:Q42529 SMR:Q42529
STRING:Q42529 PRIDE:Q42529 EnsemblPlants:AT3G54640.1 GeneID:824629
KEGG:ath:AT3G54640 TAIR:At3g54640 InParanoid:Q42529 OMA:VFICPPN
PhylomeDB:Q42529 Genevestigator:Q42529 Uniprot:Q42529
Length = 312
Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
Identities = 228/283 (80%), Positives = 263/283 (92%)
Query: 29 STLSLKRFTPMAAL-TASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLD 87
S+LS KRFTPMA+L T+SPT+GLA+TFT+LKKQGKVA IPYITAGDPDLSTTAEALK+LD
Sbjct: 29 SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88
Query: 88 SCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147
+CGSDIIELGVPYSDPLADGPVIQAAATRSL RGTN ++IL ML +VVPQ+SCPI+LFTY
Sbjct: 89 ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148
Query: 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDR 207
YNPILKRG+ FMS++R +G++GLVVPDVPLEETE L+KEA+ N IELVL TTPTTPT+R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208
Query: 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQ 267
MK IV+ASEGF+YLVSSIGVTGAR+S+SG VQ+LL++IKE++ KPVAVGFGISKPEHV+Q
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268
Query: 268 VAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 310
+AGWGADGVIVGSAMVKLLG+A+SP EGLKELEK KSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311
>TAIR|locus:2132328 [details] [associations]
symbol:AT4G02610 species:3702 "Arabidopsis thaliana"
[GO:0006568 "tryptophan metabolic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0004834 "tryptophan synthase
activity" evidence=IGI;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0033984 "indole-3-glycerol-phosphate lyase activity"
evidence=IDA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006730 "one-carbon
metabolic process" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0000162 "tryptophan
biosynthetic process" evidence=TAS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:3.20.20.70 GO:GO:0009851 SUPFAM:SSF51366 EMBL:AC002330
EMBL:AL161494 GO:GO:0004834 EMBL:AK117668 EMBL:BT006097 EMBL:F20005
IPI:IPI00517515 PIR:T01088 RefSeq:NP_192170.1 UniGene:At.48825
UniGene:At.68477 HSSP:Q8U094 ProteinModelPortal:O22765 SMR:O22765
STRING:O22765 PRIDE:O22765 EnsemblPlants:AT4G02610.1 GeneID:828226
KEGG:ath:AT4G02610 TAIR:At4g02610 eggNOG:COG0159
HOGENOM:HOG000223816 InParanoid:O22765 KO:K01695 OMA:YIYGVER
PhylomeDB:O22765 ProtClustDB:PLN02591 Genevestigator:O22765
GO:GO:0033984 TIGRFAMs:TIGR00262 Uniprot:O22765
Length = 275
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 209/268 (77%), Positives = 246/268 (91%)
Query: 43 TASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSD 102
T S TVGL+ETF RLK QGKVALIPYITAGDPDLSTTA+ALK+LDSCGSDIIELGVPYSD
Sbjct: 6 TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65
Query: 103 PLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMST 162
PLADGP IQAAA RSL +GTNFN+I+SMLKEV+PQ+SCPIALFTYYNPIL+RGV+N+M+
Sbjct: 66 PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125
Query: 163 VRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222
+++ G+ GL+VPDVPLEETE+L+ EA K++IELVL TTPTTP +RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185
Query: 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282
SS+GVTG R S++ VQ+LL++IKE+++KPVAVGFGISKPEHV+QVA WGADGVIVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245
Query: 283 VKLLGEAQSPEEGLKELEKFAKSLKSAL 310
VK+LGE++SPE+GLKELE F KSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273
>TIGR_CMR|GSU_2371 [details] [associations]
symbol:GSU_2371 "tryptophan synthase, alpha subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159 KO:K01695
TIGRFAMs:TIGR00262 OMA:VFICPPN ProtClustDB:PRK13111
HOGENOM:HOG000223814 RefSeq:NP_953418.1 ProteinModelPortal:Q74AI3
GeneID:2686600 KEGG:gsu:GSU2371 PATRIC:22027589
BioCyc:GSUL243231:GH27-2381-MONOMER Uniprot:Q74AI3
Length = 264
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 111/261 (42%), Positives = 162/261 (62%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
+A TF LK + AL+ +ITAGDPDL+ T + LL G+DI+ELGVP+SDP+ADGP
Sbjct: 4 IAGTFAELKHNSRKALVTFITAGDPDLAATEALIPLLAESGADIVELGVPFSDPMADGPT 63
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIR 169
IQ ++ R+LA GT IL M++ V + PI L YYNPIL G++ F + G+
Sbjct: 64 IQLSSERALAAGTTLPKILDMVRRVRTRCQVPIVLMGYYNPILIHGLERFAADASAAGVD 123
Query: 170 GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG 229
G+++ D+P EE + A ++ ++++ TPT+ R++ + + GFVY VS GVTG
Sbjct: 124 GVLLVDLPPEEAAEFKACADRHGLDVIFLLTPTSDEGRIRKVARQARGFVYYVSVTGVTG 183
Query: 230 ARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEA 289
AR+ + V + + I+E+ T PV VGFGIS P+ QVA ADGV+VGSA+VKL
Sbjct: 184 ARSGVEASVSSNVAAIREAITVPVVVGFGISTPDQAAQVAA-SADGVVVGSAIVKLFERF 242
Query: 290 QSPEEGLKELEKFAKSLKSAL 310
+ E G +E+ F +L+ A+
Sbjct: 243 TAAELG-REVATFVSALREAI 262
>TIGR_CMR|CHY_1581 [details] [associations]
symbol:CHY_1581 "tryptophan synthase, alpha subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004834 "tryptophan synthase activity" evidence=ISS]
HAMAP:MF_00131 InterPro:IPR002028 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167
UniPathway:UPA00035 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR SUPFAM:SSF51366 GO:GO:0004834
eggNOG:COG0159 HOGENOM:HOG000223816 KO:K01695 TIGRFAMs:TIGR00262
HSSP:P00929 OMA:VFICPPN RefSeq:YP_360410.1
ProteinModelPortal:Q3ABS4 STRING:Q3ABS4 GeneID:3727309
KEGG:chy:CHY_1581 PATRIC:21276287
BioCyc:CHYD246194:GJCN-1580-MONOMER Uniprot:Q3ABS4
Length = 267
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 104/260 (40%), Positives = 163/260 (62%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
+ + F + +G+ ALI Y GDP+L+ + E +K L + G+D+IE+G+P+SDPLADGPV
Sbjct: 4 IGQVFAEKRSRGEKALIAYTMGGDPNLTFSLEIIKTLAAAGADLIEVGLPFSDPLADGPV 63
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIR 169
IQ A R+LA G+ +L+++ ++S P+ + +Y NPIL+ GVD F+ G
Sbjct: 64 IQRAGQRALAAGSGPEEVLALIAAARQELSLPLVIMSYLNPILQIGVDEFLRRAAGAGAD 123
Query: 170 GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG 229
GL++PD+P+EE E ++ A ++L+ PTT R++ IV + GF+Y VS GVTG
Sbjct: 124 GLIIPDLPVEEGEEIRVSAAGYGLDLIPLVAPTTGQKRLEKIVGQASGFIYCVSVTGVTG 183
Query: 230 ARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE- 288
AR S+ V +LL+ +K+ + PV +GFGI KPE + + + DGVIVGSA+V+++
Sbjct: 184 ARDSLPAEVISLLQNVKKLTELPVCLGFGIGKPEQIAYIKDY-CDGVIVGSALVEIIENY 242
Query: 289 AQSPEEGLKELEKFAKSLKS 308
Q+ E K LE A +++
Sbjct: 243 VQNRMEKDKVLELIATKVQT 262
>CGD|CAL0004378 [details] [associations]
symbol:TRP5 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004834 "tryptophan
synthase activity" evidence=IEA] [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA] HAMAP:MF_00131 HAMAP:MF_00133
InterPro:IPR002028 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168
InterPro:IPR001926 CGD:CAL0004378 Pfam:PF00291 SUPFAM:SSF53686
GO:GO:0016020 Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 EMBL:AACQ01000283
RefSeq:XP_710312.1 ProteinModelPortal:Q59KP3 SMR:Q59KP3
STRING:Q59KP3 GeneID:3648087 KEGG:cal:CaO19.4718 Uniprot:Q59KP3
Length = 702
Score = 475 (172.3 bits), Expect = 5.9e-45, P = 5.9e-45
Identities = 101/249 (40%), Positives = 145/249 (58%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
L ETF R KK+G+ AL+ +ITAG P + T L+ + + G DIIELGVP+SDP+ADGP
Sbjct: 5 LKETFARCKKEGRNALVNFITAGFPTIDDTIPILQNMQNAGVDIIELGVPFSDPIADGPT 64
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGI 168
IQ A +L G L +L + Q ++ PI L YYNPILK G F+ + G
Sbjct: 65 IQQANNIALDNGITVPKCLELLSQARDQGVTVPIILMGYYNPILKYGEQKFLKDAAEAGA 124
Query: 169 RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVT 228
G +V D+P EE + E K + V P T DR+K + E ++ F+Y+VS +G T
Sbjct: 125 NGFIVVDLPPEEAIKFRTECTKYGLSYVPLVAPATSNDRLKILGEIADSFIYVVSKMGTT 184
Query: 229 GARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286
GA +S +Q L +++ + P+AVGFG+S EH V G ADGV++GS ++ L+
Sbjct: 185 GASTKVSTGIQELCDRVRKYAGPDTPLAVGFGVSTREHFLTV-GEVADGVVIGSKIITLI 243
Query: 287 GEAQSPEEG 295
G+++ E G
Sbjct: 244 GDSKPGERG 252
>UNIPROTKB|Q59KP3 [details] [associations]
symbol:TRP5 "Likely tryptophan synthetase alpha chain"
species:237561 "Candida albicans SC5314" [GO:0016020 "membrane"
evidence=IDA] HAMAP:MF_00131 HAMAP:MF_00133 InterPro:IPR002028
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 InterPro:IPR023026
Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168 InterPro:IPR001926
CGD:CAL0004378 Pfam:PF00291 SUPFAM:SSF53686 GO:GO:0016020
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 EMBL:AACQ01000283
RefSeq:XP_710312.1 ProteinModelPortal:Q59KP3 SMR:Q59KP3
STRING:Q59KP3 GeneID:3648087 KEGG:cal:CaO19.4718 Uniprot:Q59KP3
Length = 702
Score = 475 (172.3 bits), Expect = 5.9e-45, P = 5.9e-45
Identities = 101/249 (40%), Positives = 145/249 (58%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
L ETF R KK+G+ AL+ +ITAG P + T L+ + + G DIIELGVP+SDP+ADGP
Sbjct: 5 LKETFARCKKEGRNALVNFITAGFPTIDDTIPILQNMQNAGVDIIELGVPFSDPIADGPT 64
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGI 168
IQ A +L G L +L + Q ++ PI L YYNPILK G F+ + G
Sbjct: 65 IQQANNIALDNGITVPKCLELLSQARDQGVTVPIILMGYYNPILKYGEQKFLKDAAEAGA 124
Query: 169 RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVT 228
G +V D+P EE + E K + V P T DR+K + E ++ F+Y+VS +G T
Sbjct: 125 NGFIVVDLPPEEAIKFRTECTKYGLSYVPLVAPATSNDRLKILGEIADSFIYVVSKMGTT 184
Query: 229 GARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286
GA +S +Q L +++ + P+AVGFG+S EH V G ADGV++GS ++ L+
Sbjct: 185 GASTKVSTGIQELCDRVRKYAGPDTPLAVGFGVSTREHFLTV-GEVADGVVIGSKIITLI 243
Query: 287 GEAQSPEEG 295
G+++ E G
Sbjct: 244 GDSKPGERG 252
>TIGR_CMR|BA_1254 [details] [associations]
symbol:BA_1254 "tryptophan synthase, alpha subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR SUPFAM:SSF51366 GO:GO:0004834
eggNOG:COG0159 HOGENOM:HOG000223816 KO:K01695 TIGRFAMs:TIGR00262
OMA:VFICPPN RefSeq:NP_843726.1 RefSeq:YP_017869.1
RefSeq:YP_027433.1 ProteinModelPortal:Q81TL7 IntAct:Q81TL7
DNASU:1085329 EnsemblBacteria:EBBACT00000011857
EnsemblBacteria:EBBACT00000017871 EnsemblBacteria:EBBACT00000020161
GeneID:1085329 GeneID:2814761 GeneID:2852220 KEGG:ban:BA_1254
KEGG:bar:GBAA_1254 KEGG:bat:BAS1162 ProtClustDB:PRK13111
BioCyc:BANT260799:GJAJ-1237-MONOMER
BioCyc:BANT261594:GJ7F-1291-MONOMER Uniprot:Q81TL7
Length = 258
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 94/236 (39%), Positives = 137/236 (58%)
Query: 59 KQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSL 118
+ GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L
Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRAL 70
Query: 119 ARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPL 178
G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P
Sbjct: 71 DSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPY 130
Query: 179 EETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHV 238
EE + + + I L+ T T+P +R+K I SEGFVY V+ GVTG R + +
Sbjct: 131 EEQDIIAPLLREANIALIPLVTVTSPIERIKKITSESEGFVYAVTVAGVTGVRQNFKDEI 190
Query: 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE 294
+ L ++K + PV GFGIS EHV+++ DGV+VGS +++LL E + EE
Sbjct: 191 HSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELL-ENEKREE 244
>TIGR_CMR|SPO_0815 [details] [associations]
symbol:SPO_0815 "tryptophan synthase, alpha subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISS] [GO:0004834 "tryptophan
synthase activity" evidence=ISS] HAMAP:MF_00131 InterPro:IPR002028
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035 Gene3D:3.20.20.70
EMBL:CP000031 GenomeReviews:CP000031_GR SUPFAM:SSF51366
GO:GO:0004834 eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262
OMA:VFICPPN ProtClustDB:PRK13111 HOGENOM:HOG000223815
RefSeq:YP_166068.1 ProteinModelPortal:Q5LV87 GeneID:3195134
KEGG:sil:SPO0815 PATRIC:23374907 Uniprot:Q5LV87
Length = 263
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 104/254 (40%), Positives = 144/254 (56%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F LK QGK A + Y+ AGDPD T+ E +K L G DIIELG+P++DP+ADGP IQ A
Sbjct: 8 FAELKAQGKKAFVSYVMAGDPDFDTSLELVKGLPGAGVDIIELGLPFTDPMADGPTIQLA 67
Query: 114 ATRSLARGTNFNAILSMLKEV-VPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLV 172
R+L G L + E + PI + YYNPI RGVD F++ + GI GL+
Sbjct: 68 GQRALDGGMTLQRTLDLATEFRKTDNTTPIVMMGYYNPIYSRGVDRFLADAKAAGIDGLI 127
Query: 173 VPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARA 232
V D+P EE L A + + TPTT R+ +++ + GFVY VS G+TG+
Sbjct: 128 VVDLPPEEDSELCLPAQAAGLNFIRLATPTTDDKRLPRVLQNTSGFVYYVSITGITGSAE 187
Query: 233 SISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSP 292
+ + V + IK ++ PV VGFGI+ PE + +A ADG +VGSA+V +G A P
Sbjct: 188 AEATDVGPEVARIKAATDLPVIVGFGINTPEKSRAIASV-ADGAVVGSAIVGQIG-AGKP 245
Query: 293 EEGLKELEKFAKSL 306
+ E+ F K+L
Sbjct: 246 ---VAEVLAFVKTL 256
>TIGR_CMR|DET_1488 [details] [associations]
symbol:DET_1488 "tryptophan synthase, alpha subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:CP000027 GenomeReviews:CP000027_GR
SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159 HOGENOM:HOG000223816
KO:K01695 TIGRFAMs:TIGR00262 OMA:VFICPPN ProtClustDB:PRK13111
RefSeq:YP_182188.1 HSSP:P42390 ProteinModelPortal:Q3Z6G1
STRING:Q3Z6G1 GeneID:3229282 KEGG:det:DET1488 PATRIC:21609998
BioCyc:DETH243164:GJNF-1489-MONOMER Uniprot:Q3Z6G1
Length = 255
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 91/251 (36%), Positives = 150/251 (59%)
Query: 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119
Q + +LI YIT G PD+ TT + LL+ G DIIELG+P+SDPLADG IQ A+ ++L
Sbjct: 9 QKRKSLIAYITVGYPDIETTLRLVPLLEENGVDIIELGIPFSDPLADGVTIQNASYQALQ 68
Query: 120 RGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLE 179
G LS+ + ++S P+ YYNPI G+ F G+ G ++PD+P
Sbjct: 69 NGVTPEVCLSVAALLKEKISIPMVFMGYYNPIYNYGLTKFCQKCATAGVSGFIIPDLPPG 128
Query: 180 ETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQ 239
E + + A + ++++ PT+ +R+K + S GF+YLVS GVTGA A++ +
Sbjct: 129 EAQDIDFAATEAGLDIIFLLAPTSTDERIKLVAAKSRGFIYLVSHSGVTGATANLPADLS 188
Query: 240 TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 299
+ + +++++ +P+AVGFGIS PE Q +A + +DG+IVGS +++L+ + L+++
Sbjct: 189 SFVNRVRKTARQPLAVGFGISTPEQAQNIAKF-SDGIIVGSRILQLV----QTDPSLEKV 243
Query: 300 EKFAKSLKSAL 310
F + L+ +L
Sbjct: 244 ATFIRQLRQSL 254
>ASPGD|ASPL0000007723 [details] [associations]
symbol:trpB species:162425 "Emericella nidulans"
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0070791 "cleistothecium development"
evidence=IMP] [GO:0000162 "tryptophan biosynthetic process"
evidence=IGI;IMP] [GO:0004834 "tryptophan synthase activity"
evidence=IGI;RCA;IMP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] HAMAP:MF_00131 HAMAP:MF_00133 InterPro:IPR002028
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 InterPro:IPR023026
Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168 InterPro:IPR001926
Pfam:PF00291 SUPFAM:SSF53686 Gene3D:3.20.20.70 EMBL:BN001301
SUPFAM:SSF51366 EMBL:AACD01000106 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 OMA:DSFIYVV
OrthoDB:EOG4M3DHV RefSeq:XP_663835.1 ProteinModelPortal:Q5AZP9
SMR:Q5AZP9 STRING:Q5AZP9 EnsemblFungi:CADANIAT00006763
GeneID:2870792 KEGG:ani:AN6231.2 Uniprot:Q5AZP9
Length = 723
Score = 456 (165.6 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 92/259 (35%), Positives = 154/259 (59%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
+ TF ++K++ + AL+ YITAG P + + + L L++ G+DIIELGVP++DP+ADGP
Sbjct: 4 IKNTFEKVKREKRAALVAYITAGYPTIEESVDILLGLENGGADIIELGVPFTDPIADGPT 63
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGI 168
IQ A T++LA G + +L M++ + + PI L YYNP+L G + + +++G+
Sbjct: 64 IQKANTKALANGVTVSTVLEMVRSARNRGLKAPIMLMGYYNPMLSYGEERMLRDCKEVGV 123
Query: 169 RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVT 228
G ++ D+P EE + + V P T RMK + + ++ F+Y+VS +GVT
Sbjct: 124 NGFIMVDLPPEEAVRFRDLCTSTGLSYVPLIAPATSESRMKLLCKIADSFIYVVSRMGVT 183
Query: 229 GARASISGHVQTLLREI-KESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287
GA ++S ++ LL + K S P A+GFG+S EH V ++GV++GS ++ +LG
Sbjct: 184 GATGTLSSNIPELLARVHKWSGNVPTALGFGVSTREHFLSVQEI-SEGVVIGSQIITVLG 242
Query: 288 EAQSPEEGLKELEKFAKSL 306
EA + + K E++ S+
Sbjct: 243 EAPAGQAAQKA-EEYLSSV 260
>SGD|S000002994 [details] [associations]
symbol:TRP5 "Tryptophan synthase" species:4932 "Saccharomyces
cerevisiae" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008652 "cellular
amino acid biosynthetic process" evidence=IEA] [GO:0009073
"aromatic amino acid family biosynthetic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0006568 "tryptophan
metabolic process" evidence=IEA] [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004834 "tryptophan synthase activity"
evidence=IEA;ISO;IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR002028 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168
UniPathway:UPA00035 InterPro:IPR001926 SGD:S000002994 Pfam:PF00291
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF53686 EMBL:BK006941
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 OMA:DSFIYVV
OrthoDB:EOG4M3DHV EMBL:V01342 EMBL:V01343 EMBL:Z72548 PIR:A01154
RefSeq:NP_011489.1 ProteinModelPortal:P00931 SMR:P00931
DIP:DIP-1398N IntAct:P00931 MINT:MINT-405390 STRING:P00931
PaxDb:P00931 PeptideAtlas:P00931 PRIDE:P00931 EnsemblFungi:YGL026C
GeneID:852858 KEGG:sce:YGL026C CYGD:YGL026c NextBio:972463
Genevestigator:P00931 GermOnline:YGL026C Uniprot:P00931
Length = 707
Score = 438 (159.2 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 92/246 (37%), Positives = 143/246 (58%)
Query: 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 109
L +TF KK+ + AL+ ++TAG P + T LK G DIIELG+P+SDP+ADGP
Sbjct: 5 LRQTFANAKKENRNALVTFMTAGYPTVKDTVPILKGFQDGGVDIIELGMPFSDPIADGPT 64
Query: 110 IQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGI 168
IQ + T +L G L M+ + + ++ PI L YYNPIL G + F+ G
Sbjct: 65 IQLSNTVALQNGVTLPQTLEMVSQARNEGVTVPIILMGYYNPILNYGEERFIQDAAKAGA 124
Query: 169 RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVT 228
G ++ D+P EE ++ N + L+ P+T +R++ + ++ FVY+VS +G T
Sbjct: 125 NGFIIVDLPPEEALKVRNYINDNGLSLIPLVAPSTTDERLELLSHIADSFVYVVSRMGTT 184
Query: 229 GARASISGHVQTLLREIKE-SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287
G ++S++ + L+ +++ + P+AVGFG+S EH Q V G ADGV++GS +V L G
Sbjct: 185 GVQSSVASDLDELISRVRKYTKDTPLAVGFGVSTREHFQSV-GSVADGVVIGSKIVTLCG 243
Query: 288 EAQSPE 293
+A PE
Sbjct: 244 DA--PE 247
>TIGR_CMR|SO_3024 [details] [associations]
symbol:SO_3024 "tryptophan synthase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISS] [GO:0004834 "tryptophan
synthase activity" evidence=ISS] HAMAP:MF_00131 InterPro:IPR002028
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035 Gene3D:3.20.20.70
EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF51366
GO:GO:0004834 eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262
OMA:VFICPPN ProtClustDB:PRK13111 HOGENOM:HOG000223814
RefSeq:NP_718592.1 ProteinModelPortal:Q8ECU9 SMR:Q8ECU9
GeneID:1170711 KEGG:son:SO_3024 PATRIC:23525684 Uniprot:Q8ECU9
Length = 278
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 91/258 (35%), Positives = 145/258 (56%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F+RLK +G+ A +P++T GDP + + + L G+D +ELG P+SDPLADGPVIQ A
Sbjct: 20 FSRLKAEGRGAFVPFVTLGDPSPELSLKIIDTLVQNGADALELGFPFSDPLADGPVIQGA 79
Query: 114 ATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLV 172
R+LA GT A +L ++ + PI L Y N + G+D F + + G+ ++
Sbjct: 80 NLRALAAGTTPTACFELLAKIRAKYPELPIGLLLYANLVFANGIDAFYAKAQQAGVDSVL 139
Query: 173 VPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARA 232
+ DVP+EE + A + I + P +D + + ++ EG+ YL+S GVTGA
Sbjct: 140 IADVPVEEAAPFIQAAKAHGIAPIFIAPPNADSDTLAKVSQSGEGYTYLLSRAGVTGADT 199
Query: 233 SISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSP 292
V+ +L +++E + P +GFGI++P V GA G I GSA+VK++ Q
Sbjct: 200 KAGTPVEEILAKLQEFNAPPPLLGFGIAEPAQVSAAIKAGAAGAISGSAVVKIIETHQQD 259
Query: 293 E-EGLKELEKFAKSLKSA 309
E + L L +F +++K+A
Sbjct: 260 EVKLLAALGEFTRTMKAA 277
>UNIPROTKB|Q9KST7 [details] [associations]
symbol:trpA "Tryptophan synthase alpha chain"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004834 "tryptophan synthase activity" evidence=ISS]
HAMAP:MF_00131 InterPro:IPR002028 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167
UniPathway:UPA00035 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR SUPFAM:SSF51366 GO:GO:0004834
eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262 ProtClustDB:PRK13111
PIR:D82232 RefSeq:NP_230814.1 ProteinModelPortal:Q9KST7 SMR:Q9KST7
PRIDE:Q9KST7 DNASU:2614602 GeneID:2614602 KEGG:vch:VC1169
PATRIC:20081430 OMA:GGEMKKN Uniprot:Q9KST7
Length = 268
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 88/258 (34%), Positives = 141/258 (54%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F RL + A +P++T GDP+ + ++ L G+D +ELG+P+SDPLADGP IQ A
Sbjct: 8 FQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGA 67
Query: 114 ATRSLARGTNFNAILSMLKEV-VPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLV 172
R+LA T + ++ ++ PI L Y N + RG+D+F + G+ ++
Sbjct: 68 NLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVL 127
Query: 173 VPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARA 232
+ DVP E++ A K I+ + PT + ++A+ + +G+ YL+S GVTGA
Sbjct: 128 IADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAET 187
Query: 233 SISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG-EAQS 291
+ V LL +++ P +GFGIS+P V+Q GA G I GSA+VK++ +
Sbjct: 188 KANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDN 247
Query: 292 PEEGLKELEKFAKSLKSA 309
P + L EL F +++K A
Sbjct: 248 PAKQLTELANFTQAMKKA 265
>TIGR_CMR|VC_1169 [details] [associations]
symbol:VC_1169 "tryptophan synthase, alpha subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:AE003852 GenomeReviews:AE003852_GR
SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159 KO:K01695
TIGRFAMs:TIGR00262 ProtClustDB:PRK13111 PIR:D82232
RefSeq:NP_230814.1 ProteinModelPortal:Q9KST7 SMR:Q9KST7
PRIDE:Q9KST7 DNASU:2614602 GeneID:2614602 KEGG:vch:VC1169
PATRIC:20081430 OMA:GGEMKKN Uniprot:Q9KST7
Length = 268
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 88/258 (34%), Positives = 141/258 (54%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F RL + A +P++T GDP+ + ++ L G+D +ELG+P+SDPLADGP IQ A
Sbjct: 8 FQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGA 67
Query: 114 ATRSLARGTNFNAILSMLKEV-VPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLV 172
R+LA T + ++ ++ PI L Y N + RG+D+F + G+ ++
Sbjct: 68 NLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVL 127
Query: 173 VPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARA 232
+ DVP E++ A K I+ + PT + ++A+ + +G+ YL+S GVTGA
Sbjct: 128 IADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAET 187
Query: 233 SISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG-EAQS 291
+ V LL +++ P +GFGIS+P V+Q GA G I GSA+VK++ +
Sbjct: 188 KANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDN 247
Query: 292 PEEGLKELEKFAKSLKSA 309
P + L EL F +++K A
Sbjct: 248 PAKQLTELANFTQAMKKA 265
>UNIPROTKB|P0A877 [details] [associations]
symbol:trpA species:83333 "Escherichia coli K-12"
[GO:0004834 "tryptophan synthase activity" evidence=IEA;IDA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=IMP] [GO:0000162 "tryptophan biosynthetic process"
evidence=IEA;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016829
"lyase activity" evidence=IEA;IDA] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
GO:GO:0005737 Gene3D:3.20.20.70 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR SUPFAM:SSF51366
GO:GO:0016829 GO:GO:0000162 EMBL:J01714 GO:GO:0004834
eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262 OMA:VFICPPN
ProtClustDB:PRK13111 HOGENOM:HOG000223814 EMBL:V00364 EMBL:V00372
EMBL:U23489 EMBL:U23490 EMBL:U23491 EMBL:U23492 EMBL:U23494
EMBL:U25417 EMBL:U25418 EMBL:U25419 EMBL:U25420 EMBL:U25421
EMBL:U25422 EMBL:X16698 PIR:E93746 RefSeq:NP_415776.1
RefSeq:YP_489528.1 PDB:1V7Y PDB:1WQ5 PDB:1XC4 PDB:1XCF PDBsum:1V7Y
PDBsum:1WQ5 PDBsum:1XC4 PDBsum:1XCF DisProt:DP00252
ProteinModelPortal:P0A877 SMR:P0A877 DIP:DIP-35957N IntAct:P0A877
SWISS-2DPAGE:P0A877 PaxDb:P0A877 PRIDE:P0A877
EnsemblBacteria:EBESCT00000004452 EnsemblBacteria:EBESCT00000004453
EnsemblBacteria:EBESCT00000014719 GeneID:12931135 GeneID:946204
KEGG:ecj:Y75_p1234 KEGG:eco:b1260 PATRIC:32117780 EchoBASE:EB1017
EcoGene:EG11024 BioCyc:EcoCyc:TRYPSYN-APROTEIN
BioCyc:ECOL316407:JW1252-MONOMER BioCyc:MetaCyc:TRYPSYN-APROTEIN
SABIO-RK:P0A877 EvolutionaryTrace:P0A877 Genevestigator:P0A877
Uniprot:P0A877
Length = 268
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 88/261 (33%), Positives = 149/261 (57%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F +LK++ + A +P++T GDP + + + + L G+D +ELG+P+SDPLADGP IQ A
Sbjct: 8 FAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNA 67
Query: 114 ATRSLARGTN----FNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIR 169
R+ A G F +L+++++ P + PI L Y N + +G+D F + +G+
Sbjct: 68 TLRAFAAGVTPAQCFE-MLALIRQKHPTI--PIGLLMYANLVFNKGIDEFYAQCEKVGVD 124
Query: 170 GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG 229
++V DVP+EE+ ++ A+++ + + P D ++ I G+ YL+S GVTG
Sbjct: 125 SVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTG 184
Query: 230 ARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE- 288
A + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ +
Sbjct: 185 AENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQH 244
Query: 289 AQSPEEGLKELEKFAKSLKSA 309
PE+ L L+ F + +K+A
Sbjct: 245 INEPEKMLAALKVFVQPMKAA 265
>UNIPROTKB|P00929 [details] [associations]
symbol:trpA "Tryptophan synthase alpha chain" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0005515 "protein binding" evidence=IPI] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:AE006468 GenomeReviews:AE006468_GR
SUPFAM:SSF51366 GO:GO:0004834 KO:K01695 TIGRFAMs:TIGR00262
OMA:VFICPPN ProtClustDB:PRK13111 HOGENOM:HOG000223814 EMBL:V01376
EMBL:J01810 PIR:A93837 RefSeq:NP_460686.1 PDB:1A50 PDB:1A5A
PDB:1A5B PDB:1A5S PDB:1BEU PDB:1BKS PDB:1C29 PDB:1C8V PDB:1C9D
PDB:1CW2 PDB:1CX9 PDB:1FUY PDB:1K3U PDB:1K7E PDB:1K7F PDB:1K7X
PDB:1K8X PDB:1K8Y PDB:1K8Z PDB:1KFB PDB:1KFC PDB:1KFE PDB:1KFJ
PDB:1KFK PDB:1QOP PDB:1QOQ PDB:1TJP PDB:1TTP PDB:1TTQ PDB:1UBS
PDB:1WBJ PDB:2CLE PDB:2CLF PDB:2CLH PDB:2CLI PDB:2CLK PDB:2CLL
PDB:2CLM PDB:2CLO PDB:2J9X PDB:2J9Y PDB:2J9Z PDB:2RH9 PDB:2RHG
PDB:2TRS PDB:2TSY PDB:2TYS PDB:2WSY PDB:3CEP PDB:3PR2 PDBsum:1A50
PDBsum:1A5A PDBsum:1A5B PDBsum:1A5S PDBsum:1BEU PDBsum:1BKS
PDBsum:1C29 PDBsum:1C8V PDBsum:1C9D PDBsum:1CW2 PDBsum:1CX9
PDBsum:1FUY PDBsum:1K3U PDBsum:1K7E PDBsum:1K7F PDBsum:1K7X
PDBsum:1K8X PDBsum:1K8Y PDBsum:1K8Z PDBsum:1KFB PDBsum:1KFC
PDBsum:1KFE PDBsum:1KFJ PDBsum:1KFK PDBsum:1QOP PDBsum:1QOQ
PDBsum:1TJP PDBsum:1TTP PDBsum:1TTQ PDBsum:1UBS PDBsum:1WBJ
PDBsum:2CLE PDBsum:2CLF PDBsum:2CLH PDBsum:2CLI PDBsum:2CLK
PDBsum:2CLL PDBsum:2CLM PDBsum:2CLO PDBsum:2J9X PDBsum:2J9Y
PDBsum:2J9Z PDBsum:2RH9 PDBsum:2RHG PDBsum:2TRS PDBsum:2TSY
PDBsum:2TYS PDBsum:2WSY PDBsum:3CEP PDBsum:3PR2
ProteinModelPortal:P00929 SMR:P00929 DIP:DIP-1033N IntAct:P00929
MINT:MINT-112862 PRIDE:P00929 GeneID:1253246 KEGG:stm:STM1727
PATRIC:32381967 EvolutionaryTrace:P00929 Uniprot:P00929
Length = 268
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 91/261 (34%), Positives = 145/261 (55%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F +L + + A +P++T GDP + + + + L G+D +ELGVP+SDPLADGP IQ A
Sbjct: 8 FAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNA 67
Query: 114 ATRSLARGTN----FNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIR 169
R+ A G F +L++++E P + PI L Y N + G+D F + +G+
Sbjct: 68 NLRAFAAGVTPAQCFE-MLALIREKHPTI--PIGLLMYANLVFNNGIDAFYARCEQVGVD 124
Query: 170 GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG 229
++V DVP+EE+ ++ A+++ I + P D ++ + G+ YL+S GVTG
Sbjct: 125 SVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTG 184
Query: 230 ARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE- 288
A + + L+ ++KE P GFGIS PE V GA G I GSA+VK++ +
Sbjct: 185 AENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEKN 244
Query: 289 AQSPEEGLKELEKFAKSLKSA 309
SP++ L EL F ++K+A
Sbjct: 245 LASPKQMLAELRSFVSAMKAA 265
>TIGR_CMR|CBU_1156 [details] [associations]
symbol:CBU_1156 "tryptophan synthase, alpha subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISS] [GO:0004834 "tryptophan
synthase activity" evidence=ISS] HAMAP:MF_00131 InterPro:IPR002028
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035 Gene3D:3.20.20.70
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF51366
GO:GO:0004834 eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262
OMA:VFICPPN ProtClustDB:PRK13111 RefSeq:NP_820153.1
ProteinModelPortal:Q83CG2 GeneID:1209058 KEGG:cbu:CBU_1156
PATRIC:17931051 HOGENOM:HOG000223814
BioCyc:CBUR227377:GJ7S-1145-MONOMER Uniprot:Q83CG2
Length = 267
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 94/258 (36%), Positives = 144/258 (55%)
Query: 56 RLKKQGKV--ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
R+++Q K A + Y+TAGD L + E+L L G +I+E+GVP+SDP+ADGPVIQ A
Sbjct: 3 RIEQQFKKSPAYVAYLTAGDGGLERSLESLLALAKGGVNILEVGVPFSDPVADGPVIQEA 62
Query: 114 ATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV 173
+ R+LA+GT + +L+++ PI LFTY+NP+L G D ++ G+ G +V
Sbjct: 63 SIRALAQGTTLHDVLTLITSFRQHSEIPIILFTYFNPLLAAG-DKIYQQMKSAGVDGCLV 121
Query: 174 PDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARAS 233
D+P+EE KI +L +P+T +R+K I E EG +Y V G TG RA+
Sbjct: 122 VDLPVEEAAPHLTACKTAKIAPILLISPSTTQERLKKINEHGEGMLYYVCRPGTTGVRAT 181
Query: 234 ISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 293
+ + + +IK ++ P+ GFGI+ + Q + ADG ++GS VK + E S
Sbjct: 182 LPENFPAKMNQIKSMTSLPIVTGFGIANRKMAAQALQY-ADGFVIGSLFVKAIAEGISKN 240
Query: 294 EGLKELEKFAKSLKSALP 311
L + A+SL P
Sbjct: 241 A----LTRLAQSLNPHYP 254
>UNIPROTKB|P66980 [details] [associations]
symbol:trpA "Tryptophan synthase alpha chain" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
GO:GO:0005886 GO:GO:0040007 Gene3D:3.20.20.70 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842577
SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159 KO:K01695
TIGRFAMs:TIGR00262 OMA:VFICPPN ProtClustDB:PRK13111 PIR:C70557
RefSeq:NP_216129.1 RefSeq:NP_336103.1 RefSeq:YP_006515002.1
ProteinModelPortal:P66980 SMR:P66980 PRIDE:P66980
EnsemblBacteria:EBMYCT00000003615 EnsemblBacteria:EBMYCT00000069886
GeneID:13316391 GeneID:885291 GeneID:925541 KEGG:mtc:MT1648
KEGG:mtu:Rv1613 KEGG:mtv:RVBD_1613 PATRIC:18125386
TubercuList:Rv1613 HOGENOM:HOG000223815 Uniprot:P66980
Length = 270
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 91/250 (36%), Positives = 133/250 (53%)
Query: 39 MAALTASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGV 98
M A+ S L F + + ALI Y+ G PD+ + A+ L G DIIE+GV
Sbjct: 1 MVAVEQSEASRLGPVFDSCRANNRAALIGYLPTGYPDVPASVAAMTALVESGCDIIEVGV 60
Query: 99 PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDN 158
PYSDP DGP I A +L G L+ + E + + TY+NP+L+ GVD
Sbjct: 61 PYSDPGMDGPTIARATEAALRGGVRVRDTLAAV-EAISIAGGRAVVMTYWNPVLRYGVDA 119
Query: 159 FMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218
F + G GL+ PD+ +E + + +++++ + P++ +R+ A VEAS GF
Sbjct: 120 FARDLAAAGGLGLITPDLIPDEAQQWLAASEEHRLDRIFLVAPSSTPERLAATVEASRGF 179
Query: 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278
VY S++GVTGAR ++S L+ +K S PV VG G+ Q+A + ADGVIV
Sbjct: 180 VYAASTMGVTGARDAVSQAAPELVGRVKAVSDIPVGVGLGVRSRAQAAQIAQY-ADGVIV 238
Query: 279 GSAMVKLLGE 288
GSA+V L E
Sbjct: 239 GSALVTALTE 248
>TIGR_CMR|CJE_0398 [details] [associations]
symbol:CJE_0398 "tryptophan synthase, alpha subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 Pfam:PF00290 PROSITE:PS00167 UniPathway:UPA00035
Gene3D:3.20.20.70 EMBL:CP000025 GenomeReviews:CP000025_GR
SUPFAM:SSF51366 GO:GO:0004834 eggNOG:COG0159 HOGENOM:HOG000223816
KO:K01695 OMA:YIYGVER TIGRFAMs:TIGR00262 ProtClustDB:PRK13111
RefSeq:YP_178417.1 ProteinModelPortal:Q5HWB8 STRING:Q5HWB8
GeneID:3231160 KEGG:cjr:CJE0398 PATRIC:20042498
BioCyc:CJEJ195099:GJC0-403-MONOMER Uniprot:Q5HWB8
Length = 249
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 85/251 (33%), Positives = 149/251 (59%)
Query: 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA 113
F + K+ A + Y G P+L T+ L+ LD DI+ELGV YSDP+ADG +I A
Sbjct: 4 FRKFYKEN--ANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADA 61
Query: 114 ATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV 173
A +L +G + +++ +L + + + + YYN I G++ F+ + +GI L+V
Sbjct: 62 AKIALDQGVDIHSVFELLARIKTKKA--LVFMVYYNLIFSYGLEKFVKKAKSLGICALIV 119
Query: 174 PDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARAS 233
P++ EE++ L KE + I L+ + TTP +R+K +V+ ++GF+YL++SIG+TG ++
Sbjct: 120 PELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSV 179
Query: 234 ISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 293
+Q ++EI+ + P+ VGFGI + V+++ ADGVIVG+++VK + +
Sbjct: 180 EEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKV-ADGVIVGTSIVKCFKQGNL-D 237
Query: 294 EGLKELEKFAK 304
+K++E+ K
Sbjct: 238 IIMKDIEEIFK 248
>TIGR_CMR|CPS_3527 [details] [associations]
symbol:CPS_3527 "tryptophan synthase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00131
InterPro:IPR002028 InterPro:IPR011060 InterPro:IPR013785
Pfam:PF00290 UniPathway:UPA00035 Gene3D:3.20.20.70 EMBL:CP000083
GenomeReviews:CP000083_GR SUPFAM:SSF51366 GO:GO:0004834
eggNOG:COG0159 KO:K01695 TIGRFAMs:TIGR00262 HOGENOM:HOG000223814
RefSeq:YP_270201.1 ProteinModelPortal:Q47YB9 SMR:Q47YB9
STRING:Q47YB9 GeneID:3519083 KEGG:cps:CPS_3527 PATRIC:21469991
OMA:TEAGANC BioCyc:CPSY167879:GI48-3555-MONOMER Uniprot:Q47YB9
Length = 282
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 92/267 (34%), Positives = 145/267 (54%)
Query: 53 TFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQA 112
+F LK++ + A IP++ GDP+ + +K L G+D +ELG+P+SDP ADG IQ
Sbjct: 16 SFASLKEKNEQAFIPFVMIGDPNAEQSIAVIKSLIDAGADALELGIPFSDPSADGLTIQN 75
Query: 113 AATRSLARGTNFNAILSMLKEV---VPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIR 169
AA R+L G N + + +LK V PQ+ PI L Y N + RG+D F + G+
Sbjct: 76 AALRALGAGINTDICIDILKRVREYAPQI--PIGLLLYGNLVFARGIDAFYRDMSAAGVD 133
Query: 170 GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG 229
+++ DVP+ E+E ++ A+K I + P + ++ + S G+ Y++S GVTG
Sbjct: 134 SVLIADVPIRESEPFREAALKYGIAPIFIAPPNASDETLREVSSYSRGYTYVLSRAGVTG 193
Query: 230 ARASIS--GHVQTLLREIKESSTK----PVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 283
+ S V T ++ +S K P +GFGIS P+ V+ GA G I GSA+V
Sbjct: 194 VDTAESPKNTVTTTANKLIDSLAKYHAAPPVLGFGISTPQQVKDALKAGALGAISGSAVV 253
Query: 284 KLLGEAQSPEEG-LKELEKFAKSLKSA 309
K++ + + E L +L F K +K+A
Sbjct: 254 KIIEDNLADESKMLIDLTHFVKDMKAA 280
>POMBASE|SPAC19A8.15 [details] [associations]
symbol:trp2 "tryptophan synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISO] [GO:0004834 "tryptophan
synthase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002028 InterPro:IPR006653
InterPro:IPR006654 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167
PROSITE:PS00168 UniPathway:UPA00035 InterPro:IPR001926
PomBase:SPAC19A8.15 Pfam:PF00291 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 SUPFAM:SSF53686 GenomeReviews:CU329670_GR
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 EMBL:D89113 PIR:T37946
PIR:T42090 RefSeq:NP_593777.1 ProteinModelPortal:O13831 SMR:O13831
STRING:O13831 EnsemblFungi:SPAC19A8.15.1 GeneID:2542240
KEGG:spo:SPAC19A8.15 KO:K01694 OMA:DSFIYVV OrthoDB:EOG4M3DHV
NextBio:20803307 Uniprot:O13831
Length = 697
Score = 374 (136.7 bits), Expect = 9.8e-34, P = 9.8e-34
Identities = 85/271 (31%), Positives = 145/271 (53%)
Query: 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLAD 106
T + +TF + K++ K L+ ++T G P++ T + ++ L + G+ IIELG+P+SD +AD
Sbjct: 2 TEQIKKTFLKAKEENKNVLVTFVTCGFPNVDETIKIMQGLQNGGAGIIELGIPFSDAVAD 61
Query: 107 GPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRD 165
GP I +L + +K ++ PI L YYNPI G + ++
Sbjct: 62 GPTICKGNEIALKNNITLEKVFETVKLARDAGVTIPIILMGYYNPIFSYGDAKTIQKAKE 121
Query: 166 IGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSI 225
+G G ++ D+P EE ++E K + V P+T RM+ + ++ F+Y+VS +
Sbjct: 122 VGANGFIIVDLPPEEAVGFREECKKQGVSFVPLVAPSTTDRRMELLASVADSFIYVVSRM 181
Query: 226 GVTGARASISGHVQTLLREI-----KESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280
G TG+ A+ G + T L ++ K + P+AVGFG++ EH QV G +DGV+VGS
Sbjct: 182 GSTGSSAT--GVINTALPQLCQRVRKFAGDTPLAVGFGVNTSEHFHQV-GSVSDGVVVGS 238
Query: 281 AMVKLLGEAQSPEEGLKELEKFAKSLKSALP 311
++ L+ +A+ P +E++ K L P
Sbjct: 239 KIIDLILKAE-PGTAATVVEEYCKYLTKEDP 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 311 311 0.00080 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 594 (63 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.05u 0.13s 26.18t Elapsed: 00:00:01
Total cpu time: 26.05u 0.13s 26.18t Elapsed: 00:00:01
Start: Thu May 9 23:38:14 2013 End: Thu May 9 23:38:15 2013