Query 021527
Match_columns 311
No_of_seqs 186 out of 1420
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 05:25:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nav_A Tryptophan synthase alp 100.0 1.5E-73 5.1E-78 531.0 29.8 264 47-310 4-269 (271)
2 3vnd_A TSA, tryptophan synthas 100.0 3.2E-72 1.1E-76 521.1 30.6 264 47-310 2-267 (267)
3 3tha_A Tryptophan synthase alp 100.0 3.1E-72 1E-76 516.3 20.4 248 46-303 3-250 (252)
4 1ujp_A Tryptophan synthase alp 100.0 4.6E-64 1.6E-68 467.6 25.1 253 47-310 1-253 (271)
5 2ekc_A AQ_1548, tryptophan syn 100.0 1E-62 3.5E-67 456.0 29.7 258 47-310 1-260 (262)
6 1qop_A Tryptophan synthase alp 100.0 4.7E-61 1.6E-65 445.9 32.1 264 47-310 1-266 (268)
7 1rd5_A Tryptophan synthase alp 100.0 1.3E-54 4.4E-59 400.2 30.6 260 47-310 2-261 (262)
8 1geq_A Tryptophan synthase alp 100.0 1.4E-46 4.8E-51 342.6 26.9 244 60-310 2-245 (248)
9 2f6u_A GGGPS, (S)-3-O-geranylg 100.0 3.5E-36 1.2E-40 274.0 13.5 177 67-287 10-226 (234)
10 1viz_A PCRB protein homolog; s 100.0 8.5E-36 2.9E-40 272.5 15.9 176 67-286 10-217 (240)
11 3w01_A Heptaprenylglyceryl pho 100.0 1.6E-30 5.4E-35 236.3 12.4 174 68-284 14-219 (235)
12 3vzx_A Heptaprenylglyceryl pho 99.9 2.6E-27 8.9E-32 214.6 15.0 188 68-308 9-227 (228)
13 1tqj_A Ribulose-phosphate 3-ep 99.9 3.2E-27 1.1E-31 214.2 11.3 192 64-284 6-206 (230)
14 1xm3_A Thiazole biosynthesis p 99.9 4.9E-26 1.7E-30 210.5 18.5 198 70-307 19-228 (264)
15 1h1y_A D-ribulose-5-phosphate 99.9 2.1E-25 7.2E-30 201.4 13.7 210 62-303 6-221 (228)
16 3f4w_A Putative hexulose 6 pho 99.9 1.2E-24 4E-29 193.0 15.9 185 69-285 5-193 (211)
17 1rpx_A Protein (ribulose-phosp 99.9 3.1E-25 1.1E-29 199.7 12.0 193 64-284 12-212 (230)
18 3jr2_A Hexulose-6-phosphate sy 99.9 7.7E-22 2.6E-26 176.9 15.7 204 68-311 10-218 (218)
19 2fli_A Ribulose-phosphate 3-ep 99.9 9E-21 3.1E-25 168.8 15.7 195 64-285 5-204 (220)
20 3ajx_A 3-hexulose-6-phosphate 99.8 1.3E-19 4.5E-24 160.0 15.0 181 70-284 5-191 (207)
21 3cu2_A Ribulose-5-phosphate 3- 99.8 6.3E-20 2.1E-24 167.3 11.4 192 65-285 16-223 (237)
22 3ctl_A D-allulose-6-phosphate 99.8 7.3E-20 2.5E-24 166.2 11.5 182 75-284 11-201 (231)
23 3ovp_A Ribulose-phosphate 3-ep 99.8 1.3E-19 4.6E-24 164.1 11.5 208 63-303 5-217 (228)
24 3inp_A D-ribulose-phosphate 3- 99.8 1.4E-19 4.7E-24 165.8 10.4 193 64-284 29-228 (246)
25 2w6r_A Imidazole glycerol phos 99.8 1.2E-18 4.1E-23 159.4 16.5 193 65-285 17-235 (266)
26 1ka9_F Imidazole glycerol phos 99.8 8E-18 2.7E-22 152.6 18.4 180 77-285 31-231 (252)
27 3qja_A IGPS, indole-3-glycerol 99.7 8.7E-17 3E-21 149.3 19.6 186 62-285 51-248 (272)
28 2h6r_A Triosephosphate isomera 99.7 3.5E-18 1.2E-22 153.7 8.7 147 133-285 47-205 (219)
29 1qo2_A Molecule: N-((5-phospho 99.7 6E-18 2.1E-22 153.1 10.1 177 78-285 31-229 (241)
30 1thf_D HISF protein; thermophI 99.7 2E-16 7E-21 143.4 19.8 179 78-284 31-229 (253)
31 3q58_A N-acetylmannosamine-6-p 99.7 1.2E-15 4E-20 138.3 24.4 203 47-285 4-216 (229)
32 2tps_A Protein (thiamin phosph 99.7 1.8E-16 6.1E-21 141.4 18.5 184 66-285 20-206 (227)
33 3igs_A N-acetylmannosamine-6-p 99.7 1.7E-15 5.8E-20 137.4 24.4 217 46-308 3-229 (232)
34 1h5y_A HISF; histidine biosynt 99.7 4.1E-16 1.4E-20 139.9 18.9 181 77-285 33-233 (253)
35 1nvm_A HOA, 4-hydroxy-2-oxoval 99.7 1.2E-16 4.1E-21 152.7 13.6 179 73-276 26-223 (345)
36 1xi3_A Thiamine phosphate pyro 99.7 1.2E-15 4.2E-20 134.5 18.5 172 67-284 18-195 (215)
37 3zen_D Fatty acid synthase; tr 99.6 3.6E-16 1.2E-20 181.1 12.0 166 123-288 464-655 (3089)
38 3vk5_A MOEO5; TIM barrel, tran 99.6 8.3E-15 2.8E-19 135.7 17.2 181 62-284 38-261 (286)
39 1tqx_A D-ribulose-5-phosphate 99.6 6.4E-15 2.2E-19 133.3 14.8 192 65-284 8-206 (227)
40 3tsm_A IGPS, indole-3-glycerol 99.6 9.1E-14 3.1E-18 128.9 22.0 199 50-285 46-255 (272)
41 1yxy_A Putative N-acetylmannos 99.6 1.3E-13 4.4E-18 123.9 20.0 197 52-284 9-220 (234)
42 1vzw_A Phosphoribosyl isomeras 99.5 2.8E-13 9.4E-18 122.3 16.7 177 79-284 34-227 (244)
43 3o63_A Probable thiamine-phosp 99.5 6.6E-13 2.3E-17 121.3 19.2 181 69-284 35-224 (243)
44 2zbt_A Pyridoxal biosynthesis 99.5 1.1E-14 3.8E-19 135.8 7.4 188 62-284 21-243 (297)
45 2y88_A Phosphoribosyl isomeras 99.5 3.3E-13 1.1E-17 121.5 15.0 177 79-284 33-230 (244)
46 1y0e_A Putative N-acetylmannos 99.5 4.8E-12 1.6E-16 112.5 20.8 188 63-284 5-209 (223)
47 3tdn_A FLR symmetric alpha-bet 99.5 5.1E-14 1.8E-18 127.7 6.9 191 66-284 23-234 (247)
48 2v82_A 2-dehydro-3-deoxy-6-pho 99.5 3.3E-12 1.1E-16 112.9 17.7 172 63-285 7-182 (212)
49 1vc4_A Indole-3-glycerol phosp 99.4 9.6E-12 3.3E-16 114.2 17.8 184 62-285 45-242 (254)
50 1ep3_A Dihydroorotate dehydrog 99.4 1E-12 3.4E-17 122.4 10.8 185 53-284 88-275 (311)
51 3cwo_X Beta/alpha-barrel prote 99.4 1.5E-11 5.1E-16 107.9 17.1 172 81-284 16-208 (237)
52 1jub_A Dihydroorotate dehydrog 99.4 1.5E-11 5E-16 115.1 16.6 180 63-284 94-276 (311)
53 4e38_A Keto-hydroxyglutarate-a 99.4 5.5E-11 1.9E-15 107.8 19.5 202 47-307 24-227 (232)
54 3exr_A RMPD (hexulose-6-phosph 99.4 2.1E-11 7.3E-16 109.6 16.4 186 69-285 10-202 (221)
55 1yad_A Regulatory protein TENI 99.3 7.1E-11 2.4E-15 105.1 19.3 174 67-284 20-197 (221)
56 3khj_A Inosine-5-monophosphate 99.3 1.9E-11 6.6E-16 117.5 16.3 186 92-287 40-244 (361)
57 4adt_A Pyridoxine biosynthetic 99.3 5.3E-12 1.8E-16 118.4 11.9 191 62-285 21-244 (297)
58 2gjl_A Hypothetical protein PA 99.3 1.1E-10 3.7E-15 110.3 20.3 153 125-287 53-209 (328)
59 2z6i_A Trans-2-enoyl-ACP reduc 99.3 1.4E-10 4.8E-15 109.8 21.0 183 67-287 14-199 (332)
60 2nv1_A Pyridoxal biosynthesis 99.3 1.5E-11 5.1E-16 115.3 12.4 189 62-284 21-243 (305)
61 2yw3_A 4-hydroxy-2-oxoglutarat 99.3 1.2E-10 4E-15 103.7 17.6 170 64-284 14-184 (207)
62 1q6o_A Humps, 3-keto-L-gulonat 99.3 1.2E-10 4.3E-15 103.5 17.7 185 68-284 7-196 (216)
63 1wa3_A 2-keto-3-deoxy-6-phosph 99.3 1.4E-10 4.7E-15 101.9 17.1 188 64-307 11-201 (205)
64 4fo4_A Inosine 5'-monophosphat 99.3 1.3E-10 4.5E-15 111.9 17.5 187 92-287 41-248 (366)
65 2e6f_A Dihydroorotate dehydrog 99.2 2.8E-11 9.7E-16 113.3 10.7 180 63-284 94-278 (314)
66 3nl6_A Thiamine biosynthetic b 99.2 2.3E-10 7.9E-15 115.3 17.5 177 67-284 12-214 (540)
67 3b0p_A TRNA-dihydrouridine syn 99.2 7.8E-11 2.7E-15 112.7 12.7 166 63-284 58-230 (350)
68 1vhc_A Putative KHG/KDPG aldol 99.2 2.6E-09 8.9E-14 96.2 20.7 194 64-307 18-214 (224)
69 1mxs_A KDPG aldolase; 2-keto-3 99.2 3.6E-09 1.2E-13 95.3 20.2 189 65-308 28-220 (225)
70 2p10_A MLL9387 protein; putati 99.1 6E-09 2E-13 96.4 21.2 234 48-308 14-280 (286)
71 4a29_A Engineered retro-aldol 99.1 1.8E-08 6.1E-13 92.2 23.5 198 48-285 31-239 (258)
72 1wbh_A KHG/KDPG aldolase; lyas 99.1 8.3E-09 2.8E-13 92.3 20.9 192 63-308 16-210 (214)
73 3lab_A Putative KDPG (2-keto-3 99.1 2.5E-09 8.5E-14 95.9 17.1 191 62-306 12-211 (217)
74 1jvn_A Glutamine, bifunctional 99.1 7.2E-10 2.5E-14 112.0 15.0 200 78-304 281-544 (555)
75 1i4n_A Indole-3-glycerol phosp 99.1 6.1E-09 2.1E-13 95.4 19.2 187 60-285 38-236 (251)
76 3ceu_A Thiamine phosphate pyro 99.1 1E-09 3.5E-14 97.3 13.5 156 80-285 16-178 (210)
77 3bo9_A Putative nitroalkan dio 99.1 1E-08 3.6E-13 96.9 21.3 149 123-287 61-213 (326)
78 4gj1_A 1-(5-phosphoribosyl)-5- 99.1 2.8E-09 9.5E-14 97.0 16.0 180 68-284 27-229 (243)
79 1p0k_A Isopentenyl-diphosphate 99.1 9.9E-10 3.4E-14 104.6 12.7 199 52-308 105-308 (349)
80 2agk_A 1-(5-phosphoribosyl)-5- 99.0 6.3E-10 2.2E-14 102.3 10.3 172 68-282 34-239 (260)
81 1wv2_A Thiazole moeity, thiazo 99.0 3.6E-08 1.2E-12 90.3 21.7 183 70-284 26-221 (265)
82 2htm_A Thiazole biosynthesis p 99.0 1.4E-08 4.9E-13 93.1 18.3 180 70-284 19-212 (268)
83 3o07_A Pyridoxine biosynthesis 99.0 6.4E-10 2.2E-14 102.6 7.9 178 79-284 20-234 (291)
84 3iwp_A Copper homeostasis prot 98.9 1.2E-08 4.2E-13 94.7 13.4 170 79-277 48-236 (287)
85 4fxs_A Inosine-5'-monophosphat 98.9 1.2E-08 4E-13 101.8 14.2 137 78-287 231-371 (496)
86 1ypf_A GMP reductase; GUAC, pu 98.8 2E-07 6.9E-12 88.4 19.4 138 77-284 105-244 (336)
87 1pii_A N-(5'phosphoribosyl)ant 98.8 1.3E-07 4.4E-12 93.3 17.9 185 62-285 47-242 (452)
88 4avf_A Inosine-5'-monophosphat 98.8 6.1E-08 2.1E-12 96.5 15.7 137 77-287 228-369 (490)
89 1gte_A Dihydropyrimidine dehyd 98.8 3.4E-07 1.2E-11 98.4 22.5 195 51-284 622-821 (1025)
90 3i65_A Dihydroorotate dehydrog 98.8 3.1E-08 1.1E-12 96.6 12.6 162 76-284 198-379 (415)
91 2qjg_A Putative aldolase MJ040 98.8 2.5E-07 8.4E-12 84.5 17.6 183 62-285 25-243 (273)
92 3bw2_A 2-nitropropane dioxygen 98.8 3E-07 1E-11 88.0 18.5 125 156-286 111-244 (369)
93 1p4c_A L(+)-mandelate dehydrog 98.8 1.1E-07 3.9E-12 91.7 15.0 154 76-287 135-315 (380)
94 2yzr_A Pyridoxal biosynthesis 98.8 8.1E-08 2.8E-12 90.7 13.4 185 80-285 27-277 (330)
95 3kts_A Glycerol uptake operon 98.8 1.5E-07 5E-12 82.9 14.0 159 81-283 20-183 (192)
96 3gr7_A NADPH dehydrogenase; fl 98.7 2.4E-07 8.3E-12 88.1 16.6 152 78-284 145-312 (340)
97 1f76_A Dihydroorotate dehydrog 98.7 5.7E-07 2E-11 84.8 19.0 161 76-284 152-323 (336)
98 4ef8_A Dihydroorotate dehydrog 98.7 3.3E-08 1.1E-12 94.8 10.3 179 64-284 128-311 (354)
99 3dxi_A Putative aldolase; TIM 98.7 4.1E-08 1.4E-12 92.8 10.4 181 75-276 22-215 (320)
100 1z41_A YQJM, probable NADH-dep 98.7 9.4E-07 3.2E-11 83.8 19.8 154 77-284 144-312 (338)
101 2nzl_A Hydroxyacid oxidase 1; 98.7 1.2E-06 4.2E-11 84.9 20.8 157 73-287 156-344 (392)
102 1eix_A Orotidine 5'-monophosph 98.7 3.3E-08 1.1E-12 89.9 8.9 181 71-284 21-226 (245)
103 3usb_A Inosine-5'-monophosphat 98.7 1.7E-07 5.8E-12 93.8 14.7 139 78-287 256-396 (511)
104 2czd_A Orotidine 5'-phosphate 98.7 1.9E-08 6.3E-13 89.0 6.7 175 69-285 4-191 (208)
105 3oix_A Putative dihydroorotate 98.7 1.3E-07 4.5E-12 90.2 12.8 177 63-283 129-308 (345)
106 3ffs_A Inosine-5-monophosphate 98.7 4.3E-07 1.5E-11 88.3 16.3 135 80-287 146-283 (400)
107 1hg3_A Triosephosphate isomera 98.7 4.5E-07 1.6E-11 81.7 15.1 150 130-285 50-211 (225)
108 1gox_A (S)-2-hydroxy-acid oxid 98.7 1E-06 3.5E-11 84.6 18.5 155 75-287 134-317 (370)
109 1w8s_A FBP aldolase, fructose- 98.7 1.3E-06 4.3E-11 80.3 18.0 185 72-304 36-252 (263)
110 1jcn_A Inosine monophosphate d 98.6 5.4E-07 1.8E-11 89.9 16.4 138 78-285 255-393 (514)
111 2yyu_A Orotidine 5'-phosphate 98.6 3E-07 1E-11 83.5 13.2 188 69-284 9-220 (246)
112 3zwt_A Dihydroorotate dehydrog 98.6 6.5E-08 2.2E-12 93.1 8.9 164 76-284 163-332 (367)
113 1eep_A Inosine 5'-monophosphat 98.6 4.4E-07 1.5E-11 87.9 14.8 138 78-285 153-291 (404)
114 3hgj_A Chromate reductase; TIM 98.6 1.7E-06 5.8E-11 82.4 18.1 153 78-284 153-323 (349)
115 2nli_A Lactate oxidase; flavoe 98.6 7.3E-07 2.5E-11 85.7 15.5 156 73-287 142-321 (368)
116 3sgz_A Hydroxyacid oxidase 2; 98.6 1.9E-06 6.6E-11 82.4 18.3 176 49-287 111-309 (352)
117 3r2g_A Inosine 5'-monophosphat 98.6 5.8E-07 2E-11 86.3 14.5 159 50-287 77-236 (361)
118 1kbi_A Cytochrome B2, L-LCR; f 98.6 1.7E-06 6E-11 86.5 18.2 154 73-287 256-440 (511)
119 1ydn_A Hydroxymethylglutaryl-C 98.6 1.9E-06 6.6E-11 79.9 17.2 175 74-278 23-230 (295)
120 1dbt_A Orotidine 5'-phosphate 98.6 3.8E-08 1.3E-12 89.1 5.2 202 69-302 8-233 (239)
121 1twd_A Copper homeostasis prot 98.6 1.3E-06 4.5E-11 79.8 15.2 171 79-278 10-197 (256)
122 3sr7_A Isopentenyl-diphosphate 98.6 2.2E-06 7.4E-11 82.4 17.3 187 65-308 147-335 (365)
123 1w0m_A TIM, triosephosphate is 98.6 1.4E-06 4.7E-11 78.5 14.8 148 130-285 47-208 (226)
124 1tv5_A Dhodehase, dihydroorota 98.5 2.1E-07 7.3E-12 91.6 10.0 46 239-284 360-407 (443)
125 3glc_A Aldolase LSRF; TIM barr 98.5 1.1E-06 3.6E-11 82.3 13.4 210 45-304 39-278 (295)
126 2ftp_A Hydroxymethylglutaryl-C 98.5 8.5E-06 2.9E-10 76.0 19.6 172 75-276 28-232 (302)
127 2bdq_A Copper homeostasis prot 98.5 3.5E-07 1.2E-11 82.2 9.5 175 80-284 11-211 (224)
128 3l5l_A Xenobiotic reductase A; 98.5 3.9E-06 1.3E-10 80.4 16.7 160 78-284 159-330 (363)
129 2uva_G Fatty acid synthase bet 98.5 3.3E-06 1.1E-10 96.2 18.7 164 122-288 618-804 (2060)
130 3m47_A Orotidine 5'-phosphate 98.5 4.3E-06 1.5E-10 75.2 15.5 197 68-309 16-225 (228)
131 1vrd_A Inosine-5'-monophosphat 98.4 4.4E-06 1.5E-10 82.7 15.1 138 77-284 236-374 (494)
132 1vkf_A Glycerol uptake operon 98.4 3.2E-06 1.1E-10 74.0 11.4 130 127-281 45-179 (188)
133 2c6q_A GMP reductase 2; TIM ba 98.3 1.3E-05 4.3E-10 76.6 15.6 134 80-284 120-257 (351)
134 3ru6_A Orotidine 5'-phosphate 98.3 2.3E-05 7.8E-10 73.4 16.0 177 69-284 29-235 (303)
135 1zfj_A Inosine monophosphate d 98.3 1.1E-05 3.8E-10 79.7 14.5 134 78-284 233-370 (491)
136 1vcf_A Isopentenyl-diphosphate 98.3 4.8E-05 1.6E-09 71.7 18.0 147 138-286 116-292 (332)
137 3k13_A 5-methyltetrahydrofolat 98.3 6.5E-05 2.2E-09 70.3 18.6 187 75-286 35-261 (300)
138 2ztj_A Homocitrate synthase; ( 98.2 4E-05 1.4E-09 73.9 16.9 167 76-277 24-219 (382)
139 3ih1_A Methylisocitrate lyase; 98.2 0.0001 3.6E-09 69.0 19.1 204 49-286 16-250 (305)
140 1vhn_A Putative flavin oxidore 98.2 5.4E-06 1.8E-10 77.8 10.4 154 64-284 60-218 (318)
141 3kru_A NADH:flavin oxidoreduct 98.2 5.1E-05 1.7E-09 72.2 17.1 151 78-284 144-312 (343)
142 2gou_A Oxidoreductase, FMN-bin 98.2 2.8E-05 9.7E-10 74.5 15.2 150 77-284 161-327 (365)
143 1vyr_A Pentaerythritol tetrani 98.2 3.7E-05 1.3E-09 73.6 15.7 152 77-284 161-328 (364)
144 4djd_D C/Fe-SP, corrinoid/iron 98.2 5.6E-05 1.9E-09 71.4 16.4 198 77-308 80-319 (323)
145 3eeg_A 2-isopropylmalate synth 98.2 3E-05 1E-09 73.2 14.4 166 76-276 27-227 (325)
146 1ps9_A 2,4-dienoyl-COA reducta 98.2 4.6E-05 1.6E-09 78.0 16.8 159 77-284 141-315 (671)
147 1ydo_A HMG-COA lyase; TIM-barr 98.1 0.00013 4.4E-09 68.3 18.1 172 75-276 26-230 (307)
148 1vqt_A Orotidine 5'-phosphate 98.1 2.8E-05 9.5E-10 69.2 12.8 166 71-285 16-198 (213)
149 3gka_A N-ethylmaleimide reduct 98.1 2.5E-05 8.7E-10 74.8 13.0 145 78-284 162-321 (361)
150 2r14_A Morphinone reductase; H 98.1 3.9E-05 1.3E-09 73.9 14.0 152 77-284 166-333 (377)
151 4ab4_A Xenobiotic reductase B; 98.1 3.9E-05 1.3E-09 73.6 13.7 145 78-284 154-313 (362)
152 2uv8_G Fatty acid synthase sub 98.1 4.1E-05 1.4E-09 87.1 15.9 182 80-287 604-810 (2051)
153 1to3_A Putative aldolase YIHT; 98.1 3.8E-05 1.3E-09 71.9 13.3 178 75-285 46-260 (304)
154 3ble_A Citramalate synthase fr 98.1 8.7E-05 3E-09 70.3 15.8 167 75-277 39-243 (337)
155 2qr6_A IMP dehydrogenase/GMP r 98.1 5.5E-05 1.9E-09 72.8 14.7 155 123-287 140-314 (393)
156 1nsj_A PRAI, phosphoribosyl an 98.1 0.00021 7.1E-09 63.3 17.0 188 79-308 11-204 (205)
157 2cw6_A Hydroxymethylglutaryl-C 98.1 0.00013 4.5E-09 67.7 16.3 173 75-277 25-230 (298)
158 3ivs_A Homocitrate synthase, m 98.1 0.00016 5.6E-09 70.6 17.5 167 75-276 59-252 (423)
159 3ewb_X 2-isopropylmalate synth 98.0 0.00012 4.1E-09 68.2 15.7 171 75-276 25-226 (293)
160 2yci_X 5-methyltetrahydrofolat 98.0 0.00051 1.7E-08 63.3 19.6 176 75-278 32-237 (271)
161 4af0_A Inosine-5'-monophosphat 98.0 6.5E-05 2.2E-09 75.1 14.3 140 78-287 281-421 (556)
162 2hsa_B 12-oxophytodienoate red 98.0 0.00018 6.2E-09 69.8 17.1 161 77-284 171-353 (402)
163 3tdn_A FLR symmetric alpha-bet 98.0 2.1E-05 7.1E-10 70.8 9.6 46 239-284 68-113 (247)
164 3tjx_A Dihydroorotate dehydrog 98.0 1.7E-05 5.9E-10 75.4 9.3 180 63-284 127-311 (354)
165 3rmj_A 2-isopropylmalate synth 98.0 0.0002 6.9E-09 68.8 16.5 167 75-276 32-233 (370)
166 2nx9_A Oxaloacetate decarboxyl 98.0 0.00015 5.2E-09 71.6 15.6 183 75-277 28-231 (464)
167 3l5a_A NADH/flavin oxidoreduct 98.0 0.0001 3.4E-09 72.0 14.1 158 78-284 171-351 (419)
168 3tr9_A Dihydropteroate synthas 98.0 0.00021 7.1E-09 67.2 15.6 105 75-199 47-155 (314)
169 1rqb_A Transcarboxylase 5S sub 97.9 0.00037 1.3E-08 70.0 18.2 183 74-276 44-249 (539)
170 1v5x_A PRA isomerase, phosphor 97.9 0.00035 1.2E-08 61.7 15.5 187 79-308 10-198 (203)
171 3aty_A Tcoye, prostaglandin F2 97.9 0.00028 9.4E-09 68.0 15.5 149 78-284 175-341 (379)
172 1icp_A OPR1, 12-oxophytodienoa 97.9 7.1E-05 2.4E-09 72.0 11.2 153 77-284 167-335 (376)
173 3eoo_A Methylisocitrate lyase; 97.9 0.0028 9.5E-08 59.1 21.4 201 51-286 11-246 (298)
174 3bg3_A Pyruvate carboxylase, m 97.9 0.00073 2.5E-08 70.1 19.0 175 74-276 122-334 (718)
175 2dqw_A Dihydropteroate synthas 97.8 0.00015 5.1E-09 67.6 12.4 165 75-268 50-239 (294)
176 1tx2_A DHPS, dihydropteroate s 97.8 0.00026 8.8E-09 66.1 13.9 157 76-258 62-238 (297)
177 3khj_A Inosine-5-monophosphate 97.8 0.00028 9.6E-09 67.5 14.3 129 138-279 44-173 (361)
178 1f6y_A 5-methyltetrahydrofolat 97.8 0.00095 3.3E-08 61.1 17.3 176 75-278 23-228 (262)
179 1mzh_A Deoxyribose-phosphate a 97.8 0.00027 9.2E-09 63.1 13.3 134 72-275 61-200 (225)
180 2vp8_A Dihydropteroate synthas 97.8 0.0002 6.8E-09 67.5 12.6 107 73-200 61-168 (318)
181 3tr2_A Orotidine 5'-phosphate 97.8 0.00043 1.5E-08 62.6 14.2 182 62-284 8-221 (239)
182 2qiw_A PEP phosphonomutase; st 97.8 0.0027 9.2E-08 57.9 19.5 195 51-281 9-238 (255)
183 3tfx_A Orotidine 5'-phosphate 97.8 0.00069 2.4E-08 62.0 15.1 194 69-308 9-238 (259)
184 1thf_D HISF protein; thermophI 97.8 0.00011 3.6E-09 65.9 9.6 47 238-284 62-108 (253)
185 3vkj_A Isopentenyl-diphosphate 97.7 0.0022 7.7E-08 61.4 19.3 48 240-287 256-304 (368)
186 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 8.3E-05 2.8E-09 67.3 8.8 79 202-284 31-109 (243)
187 1s2w_A Phosphoenolpyruvate pho 97.7 0.0021 7.2E-08 59.9 18.2 200 51-286 8-245 (295)
188 1xg4_A Probable methylisocitra 97.7 0.0018 6.3E-08 60.3 17.6 201 51-286 6-242 (295)
189 2w6r_A Imidazole glycerol phos 97.7 0.0001 3.6E-09 66.5 8.7 76 204-283 32-107 (266)
190 3b8i_A PA4872 oxaloacetate dec 97.7 0.003 1E-07 58.6 18.7 202 50-286 9-241 (287)
191 2ze3_A DFA0005; organic waste 97.7 0.0084 2.9E-07 55.2 21.4 198 51-286 7-239 (275)
192 2y88_A Phosphoribosyl isomeras 97.7 0.0001 3.5E-09 65.7 8.2 75 205-284 34-108 (244)
193 3fa4_A 2,3-dimethylmalate lyas 97.7 0.011 3.7E-07 55.3 22.2 201 51-285 6-245 (302)
194 3k30_A Histamine dehydrogenase 97.7 0.00058 2E-08 70.1 14.9 155 77-284 156-329 (690)
195 1aj0_A DHPS, dihydropteroate s 97.7 0.00035 1.2E-08 64.8 11.9 157 75-257 36-218 (282)
196 1ka9_F Imidazole glycerol phos 97.7 0.00019 6.6E-09 64.2 9.9 47 238-284 63-109 (252)
197 2h9a_B CO dehydrogenase/acetyl 97.7 0.0005 1.7E-08 64.6 12.9 161 77-257 74-246 (310)
198 1dxe_A 2-dehydro-3-deoxy-galac 97.7 0.0032 1.1E-07 57.1 17.9 193 54-284 10-242 (256)
199 1eye_A DHPS 1, dihydropteroate 97.7 0.00098 3.3E-08 61.7 14.7 170 73-269 25-220 (280)
200 1izc_A Macrophomate synthase i 97.6 0.0023 8E-08 60.7 17.4 196 49-284 27-279 (339)
201 2v5j_A 2,4-dihydroxyhept-2-ENE 97.6 0.015 5.2E-07 53.7 22.5 192 54-284 30-263 (287)
202 3cpr_A Dihydrodipicolinate syn 97.6 0.0028 9.5E-08 59.0 17.6 185 64-282 20-221 (304)
203 3ve9_A Orotidine-5'-phosphate 97.6 0.00056 1.9E-08 60.9 12.2 166 77-285 11-186 (215)
204 4fo4_A Inosine 5'-monophosphat 97.6 0.0012 4.1E-08 63.3 15.2 129 138-279 45-177 (366)
205 1o94_A Tmadh, trimethylamine d 97.6 0.00065 2.2E-08 70.3 14.2 160 77-284 149-326 (729)
206 4dbe_A Orotidine 5'-phosphate 97.6 0.0011 3.9E-08 59.1 14.0 169 78-285 14-193 (222)
207 1vzw_A Phosphoribosyl isomeras 97.6 0.00014 4.8E-09 64.9 7.9 76 204-284 34-109 (244)
208 1zlp_A PSR132, petal death pro 97.6 0.0016 5.3E-08 61.4 15.3 201 51-286 28-264 (318)
209 4aaj_A N-(5'-phosphoribosyl)an 97.6 0.015 5E-07 52.2 20.5 191 70-310 25-227 (228)
210 3lye_A Oxaloacetate acetyl hyd 97.5 0.024 8.2E-07 53.0 22.2 201 51-285 13-253 (307)
211 2y5s_A DHPS, dihydropteroate s 97.5 0.00073 2.5E-08 63.0 11.8 160 74-257 43-232 (294)
212 3mcm_A 2-amino-4-hydroxy-6-hyd 97.5 0.00096 3.3E-08 65.4 13.1 107 74-199 209-322 (442)
213 2vws_A YFAU, 2-keto-3-deoxy su 97.5 0.014 4.7E-07 53.3 19.7 195 48-284 7-242 (267)
214 2hjp_A Phosphonopyruvate hydro 97.4 0.0058 2E-07 56.8 16.9 200 51-286 4-242 (290)
215 3fst_A 5,10-methylenetetrahydr 97.4 0.022 7.6E-07 53.1 20.9 220 60-308 20-266 (304)
216 3noy_A 4-hydroxy-3-methylbut-2 97.4 0.0063 2.2E-07 57.9 17.2 153 70-259 39-213 (366)
217 1q7z_A 5-methyltetrahydrofolat 97.4 0.0022 7.6E-08 64.8 14.8 174 75-278 338-537 (566)
218 2qr6_A IMP dehydrogenase/GMP r 97.4 0.0034 1.2E-07 60.2 15.5 96 182-280 145-240 (393)
219 3ldv_A Orotidine 5'-phosphate 97.4 0.0039 1.3E-07 56.9 14.6 177 69-284 32-239 (255)
220 1qo2_A Molecule: N-((5-phospho 97.4 0.00037 1.3E-08 62.2 7.4 45 239-284 63-107 (241)
221 3qz6_A HPCH/HPAI aldolase; str 97.3 0.01 3.5E-07 54.1 17.0 192 54-283 6-240 (261)
222 3q94_A Fructose-bisphosphate a 97.3 0.1 3.4E-06 48.4 25.3 205 50-284 9-241 (288)
223 2c6q_A GMP reductase 2; TIM ba 97.3 0.0022 7.6E-08 61.0 12.7 130 138-279 56-189 (351)
224 1gvf_A Tagatose-bisphosphate a 97.3 0.11 3.6E-06 48.1 25.1 204 50-284 6-237 (286)
225 2agk_A 1-(5-phosphoribosyl)-5- 97.3 0.00051 1.8E-08 62.7 7.7 71 203-285 39-109 (260)
226 3na8_A Putative dihydrodipicol 97.3 0.0094 3.2E-07 55.8 16.6 177 72-281 40-231 (315)
227 3vav_A 3-methyl-2-oxobutanoate 97.3 0.06 2.1E-06 49.5 21.5 206 53-309 20-266 (275)
228 3r2g_A Inosine 5'-monophosphat 97.3 0.00098 3.3E-08 63.8 9.9 127 137-279 40-169 (361)
229 3daq_A DHDPS, dihydrodipicolin 97.3 0.016 5.5E-07 53.5 17.8 175 73-281 19-209 (292)
230 2vef_A Dihydropteroate synthas 97.3 0.0061 2.1E-07 57.2 14.9 105 75-199 31-136 (314)
231 2vc6_A MOSA, dihydrodipicolina 97.3 0.0096 3.3E-07 55.0 16.0 179 70-281 14-207 (292)
232 2cu0_A Inosine-5'-monophosphat 97.2 0.0011 3.9E-08 65.4 10.2 134 80-285 230-363 (486)
233 3b4u_A Dihydrodipicolinate syn 97.2 0.031 1.1E-06 51.6 19.3 177 72-281 19-214 (294)
234 3m5v_A DHDPS, dihydrodipicolin 97.2 0.011 3.8E-07 54.8 16.1 181 67-281 19-214 (301)
235 2r8w_A AGR_C_1641P; APC7498, d 97.2 0.022 7.6E-07 53.6 18.4 190 65-282 39-245 (332)
236 3apt_A Methylenetetrahydrofola 97.2 0.028 9.4E-07 52.5 18.8 203 76-308 28-263 (310)
237 4hb7_A Dihydropteroate synthas 97.2 0.0075 2.6E-07 55.5 14.5 169 74-269 27-213 (270)
238 1o66_A 3-methyl-2-oxobutanoate 97.2 0.07 2.4E-06 49.1 21.1 206 52-309 7-254 (275)
239 3qze_A DHDPS, dihydrodipicolin 97.2 0.02 6.8E-07 53.5 17.8 176 72-281 39-229 (314)
240 1me8_A Inosine-5'-monophosphat 97.2 0.0037 1.3E-07 62.1 13.4 126 157-286 244-388 (503)
241 1h5y_A HISF; histidine biosynt 97.2 0.0015 5E-08 57.7 9.4 47 238-284 65-111 (253)
242 3qfe_A Putative dihydrodipicol 97.2 0.018 6E-07 54.0 17.3 177 72-281 27-222 (318)
243 1m3u_A 3-methyl-2-oxobutanoate 97.2 0.071 2.4E-06 48.8 20.7 207 52-309 7-254 (264)
244 2qf7_A Pyruvate carboxylase pr 97.2 0.0098 3.3E-07 64.9 17.5 183 74-277 570-782 (1165)
245 1aw2_A Triosephosphate isomera 97.2 0.0021 7E-08 58.8 10.3 123 159-284 81-240 (256)
246 2ehh_A DHDPS, dihydrodipicolin 97.2 0.017 5.7E-07 53.4 16.7 178 71-281 15-207 (294)
247 1ypf_A GMP reductase; GUAC, pu 97.2 0.0054 1.8E-07 57.8 13.5 132 137-280 44-178 (336)
248 2yxg_A DHDPS, dihydrodipicolin 97.2 0.018 6.1E-07 53.0 16.7 178 71-281 15-205 (289)
249 3flu_A DHDPS, dihydrodipicolin 97.2 0.022 7.6E-07 52.7 17.4 176 72-281 23-213 (297)
250 3ffs_A Inosine-5-monophosphate 97.1 0.0047 1.6E-07 59.9 13.1 129 138-279 41-212 (400)
251 1yya_A Triosephosphate isomera 97.1 0.0048 1.6E-07 56.1 12.3 122 159-284 78-238 (250)
252 1oy0_A Ketopantoate hydroxymet 97.1 0.033 1.1E-06 51.5 17.9 208 52-309 24-272 (281)
253 1ofd_A Ferredoxin-dependent gl 97.1 0.0042 1.5E-07 68.7 13.8 37 250-286 1099-1135(1520)
254 3l21_A DHDPS, dihydrodipicolin 97.1 0.014 4.6E-07 54.4 15.5 184 64-281 19-219 (304)
255 1jvn_A Glutamine, bifunctional 97.1 0.0013 4.4E-08 66.3 8.8 78 206-284 284-372 (555)
256 3si9_A DHDPS, dihydrodipicolin 97.1 0.018 6E-07 53.9 16.0 177 72-281 38-229 (315)
257 3fkr_A L-2-keto-3-deoxyarabona 97.1 0.012 4.2E-07 54.8 14.8 177 72-280 24-219 (309)
258 3tak_A DHDPS, dihydrodipicolin 97.1 0.025 8.4E-07 52.2 16.6 176 72-281 17-207 (291)
259 2hmc_A AGR_L_411P, dihydrodipi 97.1 0.042 1.4E-06 52.0 18.5 176 72-281 42-234 (344)
260 1o5k_A DHDPS, dihydrodipicolin 97.0 0.02 6.9E-07 53.2 16.0 181 72-281 28-222 (306)
261 2pgw_A Muconate cycloisomerase 97.0 0.021 7.2E-07 54.4 16.5 137 64-282 136-274 (384)
262 1o5x_A TIM, triosephosphate is 97.0 0.002 6.9E-08 58.6 8.8 122 159-284 79-237 (248)
263 1xky_A Dihydrodipicolinate syn 97.0 0.031 1.1E-06 51.8 17.1 176 72-281 28-218 (301)
264 1tre_A Triosephosphate isomera 97.0 0.0041 1.4E-07 56.8 10.7 122 159-284 79-238 (255)
265 3dz1_A Dihydrodipicolinate syn 97.0 0.032 1.1E-06 52.0 17.0 184 72-282 24-222 (313)
266 3eb2_A Putative dihydrodipicol 97.0 0.013 4.5E-07 54.3 14.3 176 72-281 20-210 (300)
267 3fst_A 5,10-methylenetetrahydr 97.0 0.027 9.1E-07 52.6 16.3 182 62-280 82-276 (304)
268 2j27_A Triosephosphate isomera 97.0 0.0082 2.8E-07 54.6 12.3 122 159-284 79-239 (250)
269 3qw3_A Orotidine-5-phosphate d 97.0 0.12 4.3E-06 46.8 20.2 201 62-304 13-249 (255)
270 2yc6_A Triosephosphate isomera 96.9 0.011 3.6E-07 54.1 12.8 122 159-284 80-242 (257)
271 1vc4_A Indole-3-glycerol phosp 96.9 0.01 3.5E-07 53.9 12.5 45 240-284 96-140 (254)
272 1b9b_A TIM, protein (triosepho 96.9 0.0017 5.8E-08 59.3 7.1 122 159-284 80-240 (255)
273 2rfg_A Dihydrodipicolinate syn 96.9 0.032 1.1E-06 51.6 15.9 178 70-281 14-206 (297)
274 3h5d_A DHDPS, dihydrodipicolin 96.9 0.033 1.1E-06 52.0 16.0 175 72-281 23-213 (311)
275 2btm_A TIM, protein (triosepho 96.9 0.0055 1.9E-07 55.8 10.3 122 159-284 78-238 (252)
276 2jgq_A Triosephosphate isomera 96.9 0.013 4.4E-07 52.7 12.5 122 159-284 73-222 (233)
277 2v9d_A YAGE; dihydrodipicolini 96.9 0.031 1.1E-06 52.9 15.8 181 72-281 47-241 (343)
278 3s5o_A 4-hydroxy-2-oxoglutarat 96.9 0.1 3.6E-06 48.3 19.1 176 72-281 30-223 (307)
279 2wkj_A N-acetylneuraminate lya 96.8 0.1 3.4E-06 48.4 18.5 176 72-281 27-217 (303)
280 2isw_A Putative fructose-1,6-b 96.8 0.26 9E-06 46.3 21.3 204 50-284 6-260 (323)
281 3oa3_A Aldolase; structural ge 96.8 0.015 5E-07 54.0 12.6 121 159-282 131-268 (288)
282 3usb_A Inosine-5'-monophosphat 96.8 0.069 2.4E-06 53.1 18.4 67 205-279 258-325 (511)
283 2i9e_A Triosephosphate isomera 96.8 0.011 3.7E-07 54.1 11.3 122 159-284 78-236 (259)
284 3hbl_A Pyruvate carboxylase; T 96.8 0.048 1.6E-06 59.4 18.3 203 53-276 522-764 (1150)
285 1mdl_A Mandelate racemase; iso 96.8 0.027 9.4E-07 53.0 14.6 135 64-279 133-270 (359)
286 1zco_A 2-dehydro-3-deoxyphosph 96.8 0.11 3.7E-06 47.4 18.0 216 67-309 24-258 (262)
287 3e96_A Dihydrodipicolinate syn 96.7 0.036 1.2E-06 51.7 15.1 176 72-281 28-216 (316)
288 1ub3_A Aldolase protein; schif 96.7 0.02 6.9E-07 51.0 12.7 120 159-282 76-210 (220)
289 3qst_A Triosephosphate isomera 96.7 0.0055 1.9E-07 55.9 9.2 122 159-284 81-241 (255)
290 3nvt_A 3-deoxy-D-arabino-heptu 96.7 0.08 2.7E-06 50.9 17.8 204 74-308 153-376 (385)
291 1f6k_A N-acetylneuraminate lya 96.7 0.18 6.2E-06 46.3 19.6 176 72-281 19-209 (293)
292 3tsm_A IGPS, indole-3-glycerol 96.7 0.012 4E-07 54.2 11.3 45 240-284 110-154 (272)
293 2ojp_A DHDPS, dihydrodipicolin 96.7 0.051 1.7E-06 50.1 15.5 176 72-281 17-207 (292)
294 1eep_A Inosine 5'-monophosphat 96.6 0.044 1.5E-06 52.6 14.7 44 235-279 178-222 (404)
295 3hq1_A 2-isopropylmalate synth 96.5 0.027 9.2E-07 57.6 13.0 172 75-277 91-309 (644)
296 3th6_A Triosephosphate isomera 96.5 0.012 4.2E-07 53.4 9.5 122 159-284 79-237 (249)
297 2rdx_A Mandelate racemase/muco 96.5 0.077 2.6E-06 50.3 15.6 133 63-280 133-268 (379)
298 1ney_A TIM, triosephosphate is 96.5 0.008 2.7E-07 54.6 8.2 122 159-284 78-236 (247)
299 2qde_A Mandelate racemase/muco 96.4 0.056 1.9E-06 51.7 14.4 135 63-279 133-270 (397)
300 1vs1_A 3-deoxy-7-phosphoheptul 96.4 0.24 8.2E-06 45.5 17.8 205 75-309 50-273 (276)
301 2vxn_A Triosephosphate isomera 96.3 0.016 5.5E-07 52.7 9.5 122 159-284 80-240 (251)
302 2nql_A AGR_PAT_674P, isomerase 96.3 0.041 1.4E-06 52.5 12.9 135 63-279 151-289 (388)
303 3kxq_A Triosephosphate isomera 96.3 0.054 1.9E-06 49.8 13.1 122 159-284 104-261 (275)
304 1ea0_A Glutamate synthase [NAD 96.3 0.036 1.2E-06 61.3 13.8 107 178-286 977-1100(1479)
305 3qw4_B UMP synthase; N-termina 96.3 0.14 4.7E-06 50.3 16.7 194 77-307 33-253 (453)
306 1jub_A Dihydroorotate dehydrog 96.3 0.033 1.1E-06 51.3 11.4 116 49-174 145-271 (311)
307 1ep3_A Dihydroorotate dehydrog 96.3 0.032 1.1E-06 51.0 11.3 104 49-174 151-270 (311)
308 3m9y_A Triosephosphate isomera 96.3 0.077 2.6E-06 48.3 13.6 122 159-284 82-242 (254)
309 2v82_A 2-dehydro-3-deoxy-6-pho 96.2 0.13 4.4E-06 44.5 14.6 106 157-278 22-127 (212)
310 2ovl_A Putative racemase; stru 96.2 0.071 2.4E-06 50.4 14.0 136 64-280 133-273 (371)
311 3tjl_A NADPH dehydrogenase; OL 96.2 0.008 2.7E-07 58.4 7.3 155 79-284 170-351 (407)
312 3elf_A Fructose-bisphosphate a 96.2 0.48 1.7E-05 44.9 19.4 214 47-284 6-281 (349)
313 1r2r_A TIM, triosephosphate is 96.2 0.016 5.4E-07 52.6 8.8 122 159-284 79-237 (248)
314 3a5f_A Dihydrodipicolinate syn 96.2 0.062 2.1E-06 49.5 13.0 175 72-281 18-207 (291)
315 3eol_A Isocitrate lyase; seatt 96.2 0.45 1.5E-05 46.4 19.4 208 49-287 48-355 (433)
316 2pcq_A Putative dihydrodipicol 96.2 0.075 2.6E-06 48.7 13.2 173 72-282 14-198 (283)
317 1mo0_A TIM, triosephosphate is 96.2 0.015 5.1E-07 53.6 8.3 122 159-284 98-256 (275)
318 3krs_A Triosephosphate isomera 96.1 0.0067 2.3E-07 55.8 5.9 122 159-284 102-260 (271)
319 3pm6_A Putative fructose-bisph 96.1 0.22 7.5E-06 46.5 16.2 205 48-285 13-257 (306)
320 3luf_A Two-component system re 96.1 0.079 2.7E-06 47.2 12.9 60 238-306 184-246 (259)
321 2r91_A 2-keto-3-deoxy-(6-phosp 96.1 0.13 4.5E-06 47.1 14.6 173 71-281 13-198 (286)
322 1m6j_A TIM, TPI, triosephospha 96.1 0.027 9.1E-07 51.5 9.7 122 159-284 86-246 (261)
323 2v5b_A Triosephosphate isomera 96.1 0.021 7.1E-07 51.7 8.9 121 160-284 74-233 (244)
324 1pii_A N-(5'phosphoribosyl)ant 96.1 0.084 2.9E-06 51.8 13.9 185 80-308 265-451 (452)
325 3i4e_A Isocitrate lyase; struc 96.1 0.52 1.8E-05 46.0 19.1 207 49-287 52-360 (439)
326 2zad_A Muconate cycloisomerase 96.1 0.19 6.6E-06 46.9 15.8 133 64-278 128-264 (345)
327 3d0c_A Dihydrodipicolinate syn 96.0 0.23 7.7E-06 46.2 16.0 174 72-281 28-216 (314)
328 3gr7_A NADPH dehydrogenase; fl 96.0 0.06 2.1E-06 50.7 12.1 102 50-173 197-306 (340)
329 1pv8_A Delta-aminolevulinic ac 96.0 0.42 1.4E-05 44.7 17.4 178 77-284 59-321 (330)
330 2qgy_A Enolase from the enviro 96.0 0.13 4.3E-06 49.1 14.4 125 73-278 147-274 (391)
331 3qja_A IGPS, indole-3-glycerol 96.0 0.03 1E-06 51.4 9.6 46 239-284 102-147 (272)
332 4g1k_A Triosephosphate isomera 96.0 0.022 7.6E-07 52.3 8.6 122 159-284 104-260 (272)
333 3sr7_A Isopentenyl-diphosphate 96.0 0.048 1.6E-06 52.1 11.1 42 237-279 193-237 (365)
334 3s6d_A Putative triosephosphat 96.0 0.014 4.7E-07 54.6 7.2 121 159-284 132-294 (310)
335 1wv2_A Thiazole moeity, thiazo 95.9 0.047 1.6E-06 49.9 10.5 70 81-174 147-216 (265)
336 3apt_A Methylenetetrahydrofola 95.9 0.24 8.2E-06 46.1 15.7 187 62-280 71-273 (310)
337 3i65_A Dihydroorotate dehydrog 95.9 0.05 1.7E-06 52.9 11.1 93 62-174 268-374 (415)
338 2oz8_A MLL7089 protein; struct 95.9 0.41 1.4E-05 45.5 17.4 135 63-279 131-273 (389)
339 1h7n_A 5-aminolaevulinic acid 95.9 0.88 3E-05 42.7 18.9 179 76-284 68-332 (342)
340 1l6s_A Porphobilinogen synthas 95.9 0.59 2E-05 43.5 17.5 173 77-277 58-309 (323)
341 1rvk_A Isomerase/lactonizing e 95.9 0.3 1E-05 46.2 16.3 134 73-281 147-284 (382)
342 3n9r_A Fructose-bisphosphate a 95.8 1.2 4E-05 41.5 21.2 204 50-284 5-260 (307)
343 2hzg_A Mandelate racemase/muco 95.8 0.19 6.4E-06 48.1 14.8 141 65-282 134-280 (401)
344 2bmb_A Folic acid synthesis pr 95.8 0.11 3.8E-06 52.1 13.5 104 75-198 247-362 (545)
345 1n7k_A Deoxyribose-phosphate a 95.8 0.04 1.4E-06 49.6 9.2 114 159-276 93-220 (234)
346 3iv3_A Tagatose 1,6-diphosphat 95.8 0.2 6.7E-06 47.3 14.3 124 159-285 115-286 (332)
347 1w1z_A Delta-aminolevulinic ac 95.8 0.55 1.9E-05 43.8 17.0 173 77-277 64-316 (328)
348 3o1n_A 3-dehydroquinate dehydr 95.8 0.61 2.1E-05 42.7 17.3 108 72-197 47-164 (276)
349 3ijd_A Uncharacterized protein 95.7 0.63 2.2E-05 43.5 17.6 238 47-308 1-268 (315)
350 1dos_A Aldolase class II; lyas 95.7 0.99 3.4E-05 42.9 19.1 214 48-285 15-294 (358)
351 3eww_A Ompdecase, orotidine-5' 95.7 1.2 4E-05 40.5 20.9 190 49-284 18-235 (260)
352 2og9_A Mandelate racemase/muco 95.7 0.19 6.4E-06 48.0 14.1 135 64-279 148-288 (393)
353 4dpp_A DHDPS 2, dihydrodipicol 95.7 0.24 8.3E-06 47.2 14.6 184 62-282 61-261 (360)
354 1w3i_A EDA, 2-keto-3-deoxy glu 95.6 0.4 1.4E-05 44.0 15.7 172 72-281 15-199 (293)
355 1vr6_A Phospho-2-dehydro-3-deo 95.6 1.2 4.2E-05 42.1 19.1 211 67-308 107-340 (350)
356 2p8b_A Mandelate racemase/muco 95.6 0.16 5.4E-06 47.9 13.1 135 65-281 131-269 (369)
357 1rvg_A Fructose-1,6-bisphospha 95.6 1.5 5.1E-05 40.8 25.9 203 50-284 5-258 (305)
358 1f8m_A Isocitrate lyase, ICL; 95.5 0.59 2E-05 45.5 17.0 184 81-287 76-356 (429)
359 4a3u_A NCR, NADH\:flavin oxido 95.5 0.28 9.5E-06 46.4 14.6 43 241-284 277-320 (358)
360 1zfj_A Inosine monophosphate d 95.5 0.25 8.5E-06 48.4 14.6 68 205-280 235-303 (491)
361 2nli_A Lactate oxidase; flavoe 95.5 0.43 1.5E-05 45.4 15.8 42 239-281 218-259 (368)
362 3zwt_A Dihydroorotate dehydrog 95.5 0.075 2.6E-06 50.7 10.5 106 49-174 200-327 (367)
363 3txv_A Probable tagatose 6-pho 95.5 0.57 1.9E-05 45.8 16.7 225 48-288 6-298 (450)
364 2ps2_A Putative mandelate race 95.5 0.38 1.3E-05 45.3 15.3 132 63-279 134-269 (371)
365 3igs_A N-acetylmannosamine-6-p 95.4 0.29 9.8E-06 43.6 13.3 106 157-278 39-155 (232)
366 3ngj_A Deoxyribose-phosphate a 95.4 0.12 4E-06 46.7 10.7 168 73-274 39-224 (239)
367 2ffc_A Orotidine 5-monophospha 95.4 0.54 1.8E-05 44.6 15.8 78 81-176 120-198 (353)
368 1tzz_A Hypothetical protein L1 95.3 0.37 1.3E-05 45.8 14.9 135 64-279 150-295 (392)
369 3q58_A N-acetylmannosamine-6-p 95.3 0.3 1E-05 43.4 13.1 106 157-278 39-155 (229)
370 3s5o_A 4-hydroxy-2-oxoglutarat 95.3 0.14 4.9E-06 47.4 11.4 24 178-201 95-118 (307)
371 3ih1_A Methylisocitrate lyase; 95.2 0.68 2.3E-05 43.1 15.6 165 62-248 89-264 (305)
372 2gjl_A Hypothetical protein PA 95.2 0.44 1.5E-05 44.1 14.5 122 138-278 14-144 (328)
373 3stp_A Galactonate dehydratase 95.2 0.28 9.6E-06 47.3 13.5 144 63-281 166-313 (412)
374 1y0e_A Putative N-acetylmannos 95.2 1.2 4E-05 38.4 16.4 111 157-281 26-148 (223)
375 3ozy_A Putative mandelate race 95.1 0.43 1.5E-05 45.5 14.6 133 65-279 139-277 (389)
376 1p0k_A Isopentenyl-diphosphate 95.1 0.52 1.8E-05 44.1 15.0 41 238-279 166-209 (349)
377 2qdd_A Mandelate racemase/muco 95.1 0.33 1.1E-05 45.9 13.7 134 64-282 134-270 (378)
378 1tkk_A Similar to chloromucona 95.1 0.41 1.4E-05 44.9 14.2 136 65-281 130-270 (366)
379 2vc6_A MOSA, dihydrodipicolina 95.1 0.21 7.1E-06 45.9 11.8 113 155-270 22-152 (292)
380 1nu5_A Chloromuconate cycloiso 95.1 0.45 1.5E-05 44.8 14.4 136 64-280 131-270 (370)
381 2ojp_A DHDPS, dihydrodipicolin 95.1 0.31 1.1E-05 44.7 13.0 112 156-271 24-154 (292)
382 2yxb_A Coenzyme B12-dependent 95.0 0.25 8.5E-06 41.4 11.2 43 237-280 85-130 (161)
383 2fiq_A Putative tagatose 6-pho 95.0 1.8 6.3E-05 41.9 18.7 193 73-287 21-289 (420)
384 3bo9_A Putative nitroalkan dio 95.0 0.52 1.8E-05 43.8 14.5 121 138-278 25-150 (326)
385 3vkj_A Isopentenyl-diphosphate 94.9 0.026 8.7E-07 54.0 5.4 40 238-278 175-217 (368)
386 2yr1_A 3-dehydroquinate dehydr 94.9 1.4 4.7E-05 39.8 16.7 172 73-271 28-220 (257)
387 3fkr_A L-2-keto-3-deoxyarabona 94.9 0.28 9.5E-06 45.5 12.3 26 177-202 88-113 (309)
388 1w5q_A Delta-aminolevulinic ac 94.9 2.1 7E-05 40.1 17.9 178 77-284 66-327 (337)
389 2e6f_A Dihydroorotate dehydrog 94.9 0.11 3.8E-06 47.8 9.5 115 50-174 148-273 (314)
390 2gdq_A YITF; mandelate racemas 94.9 0.35 1.2E-05 45.9 13.2 135 63-278 122-265 (382)
391 3f4w_A Putative hexulose 6 pho 94.9 0.074 2.5E-06 45.8 7.8 111 50-190 92-209 (211)
392 3rr1_A GALD, putative D-galact 94.9 0.75 2.6E-05 44.2 15.6 142 63-278 113-258 (405)
393 3ta6_A Triosephosphate isomera 94.8 0.42 1.4E-05 43.7 13.0 122 159-284 84-244 (267)
394 2gl5_A Putative dehydratase pr 94.8 0.52 1.8E-05 45.0 14.3 147 62-278 127-298 (410)
395 3h5d_A DHDPS, dihydrodipicolin 94.8 0.23 8E-06 46.1 11.4 114 155-271 29-161 (311)
396 3qfe_A Putative dihydrodipicol 94.8 0.26 8.7E-06 46.0 11.7 17 157-173 35-51 (318)
397 3daq_A DHDPS, dihydrodipicolin 94.7 0.24 8.1E-06 45.5 11.2 112 156-271 25-155 (292)
398 3lg3_A Isocitrate lyase; conse 94.7 0.57 1.9E-05 45.6 14.2 209 49-287 49-360 (435)
399 2pp0_A L-talarate/galactarate 94.7 0.59 2E-05 44.6 14.3 135 64-279 161-301 (398)
400 1vhc_A Putative KHG/KDPG aldol 94.7 0.67 2.3E-05 41.0 13.6 104 157-278 32-136 (224)
401 3bjs_A Mandelate racemase/muco 94.6 0.58 2E-05 45.2 14.2 132 64-278 171-310 (428)
402 2yxb_A Coenzyme B12-dependent 94.6 0.86 3E-05 38.1 13.5 121 47-183 4-137 (161)
403 2ze3_A DFA0005; organic waste 94.6 1.6 5.5E-05 39.9 16.4 121 62-200 76-212 (275)
404 2nx9_A Oxaloacetate decarboxyl 94.6 3.7 0.00013 40.2 20.1 171 52-247 68-255 (464)
405 2xz9_A Phosphoenolpyruvate-pro 94.5 0.87 3E-05 42.6 14.7 202 63-287 18-285 (324)
406 1p4c_A L(+)-mandelate dehydrog 94.5 0.032 1.1E-06 53.5 4.9 41 239-280 214-254 (380)
407 1tv5_A Dhodehase, dihydroorota 94.5 0.53 1.8E-05 46.0 13.6 90 65-174 300-402 (443)
408 2rdx_A Mandelate racemase/muco 94.4 2 6.8E-05 40.4 17.2 124 50-207 175-303 (379)
409 4ef8_A Dihydroorotate dehydrog 94.4 0.19 6.4E-06 47.8 10.0 107 48-174 179-306 (354)
410 2rfg_A Dihydrodipicolinate syn 94.4 0.35 1.2E-05 44.5 11.6 18 156-173 23-40 (297)
411 1zlp_A PSR132, petal death pro 94.4 1.8 6.2E-05 40.4 16.3 185 62-271 101-300 (318)
412 1x1o_A Nicotinate-nucleotide p 94.3 0.24 8.2E-06 45.7 10.2 45 237-284 229-273 (286)
413 3bg3_A Pyruvate carboxylase, m 94.3 2.5 8.5E-05 43.7 18.7 146 79-247 199-359 (718)
414 2wqp_A Polysialic acid capsule 94.3 3.3 0.00011 39.2 18.1 181 74-274 32-231 (349)
415 2nuw_A 2-keto-3-deoxygluconate 94.3 1 3.5E-05 41.1 14.4 170 72-281 15-197 (288)
416 1sjd_A N-acylamino acid racema 94.3 0.68 2.3E-05 43.4 13.6 134 62-278 127-262 (368)
417 3fa4_A 2,3-dimethylmalate lyas 94.3 1.9 6.6E-05 40.0 16.2 123 62-197 80-212 (302)
418 3dz1_A Dihydrodipicolinate syn 94.2 0.33 1.1E-05 45.0 11.1 112 155-270 30-160 (313)
419 3i4k_A Muconate lactonizing en 94.2 1 3.5E-05 42.7 14.8 135 64-279 137-275 (383)
420 3ndo_A Deoxyribose-phosphate a 94.2 0.059 2E-06 48.3 5.7 111 159-276 85-218 (231)
421 3q45_A Mandelate racemase/muco 94.2 0.73 2.5E-05 43.5 13.5 133 66-280 131-266 (368)
422 4h3d_A 3-dehydroquinate dehydr 94.2 3.1 0.00011 37.5 17.2 116 61-197 18-144 (258)
423 2nwr_A 2-dehydro-3-deoxyphosph 94.1 0.91 3.1E-05 41.4 13.5 179 76-283 16-226 (267)
424 3ijd_A Uncharacterized protein 94.1 0.22 7.4E-06 46.7 9.5 209 56-309 83-304 (315)
425 3eez_A Putative mandelate race 94.1 2.1 7.3E-05 40.4 16.7 136 63-283 133-271 (378)
426 3lye_A Oxaloacetate acetyl hyd 94.1 1 3.4E-05 42.0 14.0 112 63-188 89-213 (307)
427 2ztj_A Homocitrate synthase; ( 94.1 1.7 5.9E-05 41.4 16.0 163 50-233 53-230 (382)
428 1o5k_A DHDPS, dihydrodipicolin 94.1 2.2 7.6E-05 39.2 16.3 107 60-189 79-190 (306)
429 1nvm_A HOA, 4-hydroxy-2-oxoval 94.0 1.9 6.3E-05 40.4 15.9 166 51-246 70-247 (345)
430 1rqb_A Transcarboxylase 5S sub 94.0 4.5 0.00015 40.4 19.4 171 52-247 85-274 (539)
431 3eoo_A Methylisocitrate lyase; 94.0 1.8 6.3E-05 40.0 15.5 122 62-197 83-212 (298)
432 2hmc_A AGR_L_411P, dihydrodipi 94.0 0.54 1.8E-05 44.4 12.1 114 156-271 49-178 (344)
433 2p10_A MLL9387 protein; putati 94.0 0.94 3.2E-05 41.7 13.2 137 63-218 96-256 (286)
434 3b8i_A PA4872 oxaloacetate dec 94.0 1.6 5.6E-05 40.1 15.0 126 55-196 75-208 (287)
435 4af0_A Inosine-5'-monophosphat 93.9 0.13 4.6E-06 51.4 8.1 67 205-279 283-350 (556)
436 3r12_A Deoxyribose-phosphate a 93.9 0.15 5.1E-06 46.5 7.8 112 159-276 116-244 (260)
437 3jva_A Dipeptide epimerase; en 93.9 0.73 2.5E-05 43.2 12.9 137 64-282 128-267 (354)
438 3b4u_A Dihydrodipicolinate syn 93.9 0.63 2.1E-05 42.7 12.1 114 156-271 26-161 (294)
439 1vcv_A Probable deoxyribose-ph 93.9 0.12 4.1E-06 46.1 7.0 113 160-274 73-211 (226)
440 2b7n_A Probable nicotinate-nuc 93.9 0.16 5.3E-06 46.5 7.9 48 236-284 214-262 (273)
441 3m5v_A DHDPS, dihydrodipicolin 93.8 1.1 3.9E-05 41.1 13.7 68 62-151 77-144 (301)
442 3to5_A CHEY homolog; alpha(5)b 93.8 1.2 4E-05 36.0 12.3 98 169-278 14-115 (134)
443 1ydn_A Hydroxymethylglutaryl-C 93.7 3.6 0.00012 37.3 17.0 154 80-247 82-259 (295)
444 2pgw_A Muconate cycloisomerase 93.7 0.51 1.7E-05 44.7 11.5 126 50-207 177-307 (384)
445 1s2w_A Phosphoenolpyruvate pho 93.7 2.5 8.5E-05 39.0 15.8 188 62-271 79-281 (295)
446 3ble_A Citramalate synthase fr 93.7 1.8 6.1E-05 40.5 15.0 152 82-248 101-268 (337)
447 3toy_A Mandelate racemase/muco 93.6 0.78 2.7E-05 43.6 12.7 135 64-279 156-294 (383)
448 2yxg_A DHDPS, dihydrodipicolin 93.6 2.1 7.1E-05 39.0 15.1 70 60-151 67-136 (289)
449 3gk0_A PNP synthase, pyridoxin 93.6 4.3 0.00015 37.1 18.3 176 72-284 51-248 (278)
450 1yxy_A Putative N-acetylmannos 93.6 1.7 5.8E-05 37.8 13.9 110 156-276 38-157 (234)
451 1r0m_A N-acylamino acid racema 93.6 0.83 2.8E-05 43.0 12.7 132 62-278 134-268 (375)
452 3tak_A DHDPS, dihydrodipicolin 93.6 1.4 4.9E-05 40.2 13.9 70 60-151 68-137 (291)
453 3f6p_A Transcriptional regulat 93.6 1.1 3.7E-05 33.9 11.3 97 171-278 5-101 (120)
454 1yad_A Regulatory protein TENI 93.5 0.21 7.2E-06 43.4 7.9 90 80-191 120-215 (221)
455 3ro6_B Putative chloromuconate 93.5 0.54 1.8E-05 44.2 11.2 138 64-283 129-270 (356)
456 1sfl_A 3-dehydroquinate dehydr 93.5 3.8 0.00013 36.3 18.0 174 70-271 10-206 (238)
457 2ox4_A Putative mandelate race 93.5 0.97 3.3E-05 42.9 13.1 135 62-278 123-289 (403)
458 2cw6_A Hydroxymethylglutaryl-C 93.5 2.9 9.9E-05 38.1 15.9 154 80-247 83-260 (298)
459 1z41_A YQJM, probable NADH-dep 93.5 0.62 2.1E-05 43.5 11.5 103 50-174 197-307 (338)
460 1ccw_A Protein (glutamate muta 93.5 0.19 6.4E-06 41.0 6.9 43 238-280 71-121 (137)
461 3i6e_A Muconate cycloisomerase 93.5 1.8 6.2E-05 41.0 14.9 137 63-280 136-274 (385)
462 1geq_A Tryptophan synthase alp 93.5 0.063 2.2E-06 47.5 4.4 43 238-280 68-116 (248)
463 2otd_A Glycerophosphodiester p 93.4 0.3 1E-05 43.2 8.9 38 239-278 197-234 (247)
464 2ovl_A Putative racemase; stru 93.4 0.52 1.8E-05 44.4 11.0 92 75-197 203-298 (371)
465 2zc8_A N-acylamino acid racema 93.4 0.96 3.3E-05 42.4 12.8 129 65-278 130-261 (369)
466 3r0u_A Enzyme of enolase super 93.4 1.8 6.1E-05 41.1 14.7 139 63-281 130-271 (379)
467 2pz0_A Glycerophosphoryl diest 93.3 0.39 1.3E-05 42.8 9.4 38 239-278 201-238 (252)
468 3na8_A Putative dihydrodipicol 93.3 1.6 5.5E-05 40.5 14.0 70 60-151 91-160 (315)
469 2qkf_A 3-deoxy-D-manno-octulos 93.3 1.1 3.9E-05 40.9 12.7 181 76-283 28-240 (280)
470 2a4a_A Deoxyribose-phosphate a 93.3 0.38 1.3E-05 44.3 9.4 59 215-274 183-249 (281)
471 1f76_A Dihydroorotate dehydrog 93.2 0.49 1.7E-05 43.9 10.4 92 63-174 212-318 (336)
472 3rlg_A Sphingomyelin phosphodi 93.2 0.71 2.4E-05 42.9 11.2 195 77-278 36-268 (302)
473 1xg4_A Probable methylisocitra 93.2 2.5 8.5E-05 39.0 14.9 121 62-196 78-207 (295)
474 2o56_A Putative mandelate race 93.2 1.3 4.5E-05 42.1 13.5 137 62-278 127-295 (407)
475 4avf_A Inosine-5'-monophosphat 93.2 0.25 8.4E-06 48.8 8.5 67 205-279 231-298 (490)
476 2jbm_A Nicotinate-nucleotide p 93.1 0.21 7.2E-06 46.3 7.6 48 236-284 229-277 (299)
477 4fxs_A Inosine-5'-monophosphat 93.1 0.27 9.3E-06 48.6 8.8 67 205-279 233-300 (496)
478 3qvq_A Phosphodiesterase OLEI0 93.1 1.3 4.5E-05 39.3 12.7 37 240-278 201-237 (252)
479 2htm_A Thiazole biosynthesis p 93.1 0.28 9.5E-06 44.9 8.0 70 81-174 136-207 (268)
480 2nzl_A Hydroxyacid oxidase 1; 93.1 0.18 6.2E-06 48.4 7.2 42 239-281 241-282 (392)
481 1vrd_A Inosine-5'-monophosphat 93.0 0.28 9.6E-06 48.1 8.7 45 235-280 262-307 (494)
482 3fok_A Uncharacterized protein 93.0 0.6 2E-05 43.5 10.3 132 159-303 133-295 (307)
483 2v9d_A YAGE; dihydrodipicolini 93.0 3.6 0.00012 38.6 15.9 69 61-151 99-167 (343)
484 3my9_A Muconate cycloisomerase 93.0 0.95 3.3E-05 42.8 12.1 136 64-280 135-273 (377)
485 1m5w_A Pyridoxal phosphate bio 93.0 2.4 8.1E-05 38.1 13.8 175 73-284 24-220 (243)
486 3g3d_A UMP synthase, uridine 5 93.0 5.8 0.0002 36.9 20.7 191 48-284 69-287 (312)
487 3mqt_A Mandelate racemase/muco 92.9 0.83 2.8E-05 43.6 11.6 137 62-278 130-281 (394)
488 3gl9_A Response regulator; bet 92.9 1.4 4.8E-05 33.4 11.0 75 80-182 36-113 (122)
489 3l5l_A Xenobiotic reductase A; 92.8 0.23 7.9E-06 47.0 7.6 102 50-173 211-324 (363)
490 1tqx_A D-ribulose-5-phosphate 92.8 0.79 2.7E-05 40.7 10.6 98 49-174 99-201 (227)
491 3fs2_A 2-dehydro-3-deoxyphosph 92.8 3.3 0.00011 38.4 15.0 178 76-283 54-264 (298)
492 3qze_A DHDPS, dihydrodipicolin 92.8 1.1 3.9E-05 41.5 12.1 70 60-151 90-159 (314)
493 3f6p_A Transcriptional regulat 92.8 1.1 3.8E-05 33.8 10.2 75 80-182 36-110 (120)
494 3hbl_A Pyruvate carboxylase; T 92.8 4 0.00014 44.4 18.0 171 54-247 597-789 (1150)
495 1mdl_A Mandelate racemase; iso 92.8 0.49 1.7E-05 44.3 9.6 93 75-198 201-297 (359)
496 3gdm_A Orotidine 5'-phosphate 92.7 5.6 0.00019 36.1 17.5 193 49-284 16-239 (267)
497 3cpr_A Dihydrodipicolinate syn 92.7 3.3 0.00011 38.0 15.1 70 60-151 83-152 (304)
498 2z6i_A Trans-2-enoyl-ACP reduc 92.7 1.3 4.3E-05 41.2 12.4 121 138-278 11-136 (332)
499 3gl9_A Response regulator; bet 92.7 2 6.9E-05 32.5 11.7 97 171-278 5-104 (122)
500 3hgj_A Chromate reductase; TIM 92.7 0.81 2.8E-05 43.0 11.1 103 50-174 205-318 (349)
No 1
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=100.00 E-value=1.5e-73 Score=530.99 Aligned_cols=264 Identities=33% Similarity=0.613 Sum_probs=246.3
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+||++.|++++++||++||+|+++|||+++.+.++++.|+++|+|+||||+|||||++|||+||+|+.|||++|+++++
T Consensus 4 m~ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~ 83 (271)
T 3nav_A 4 MNRYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDI 83 (271)
T ss_dssp CCHHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 127 ILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 127 ~~~~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
+|++++++|++ .++|+++|+||||+++||+++|++.|+++|+||+|+||+|+||..++++.++++|++.|++++|+|++
T Consensus 84 ~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~ 163 (271)
T 3nav_A 84 CFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASD 163 (271)
T ss_dssp HHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCH
Confidence 99999999987 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+|++++++.+.||+|++|+.|+||.++..++++.++++++|+.+++|++|||||+++||+++....|||||||||+|++.
T Consensus 164 eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~~ 243 (271)
T 3nav_A 164 ETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKI 243 (271)
T ss_dssp HHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 99999999999999999999999999888888999999999999999999999999999997888899999999999999
Q ss_pred hhhcC-CchhHHHHHHHHHHHHHhhC
Q 021527 286 LGEAQ-SPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 286 ~~~~~-~~~~~~~~~~~~~~~l~~~~ 310 (311)
+++.. ++++.++++.+|+++|+.++
T Consensus 244 i~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (271)
T 3nav_A 244 IETHLDNPAKQLTELANFTQAMKKAT 269 (271)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHh
Confidence 98642 34567899999999999876
No 2
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=100.00 E-value=3.2e-72 Score=521.15 Aligned_cols=264 Identities=35% Similarity=0.626 Sum_probs=246.5
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+||++.|++++++||++||+|+++|||+++.+.++++.|+++|+|+||||+|||||++|||+||+++.|||++|+++++
T Consensus 2 m~ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~ 81 (267)
T 3vnd_A 2 SNRYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSD 81 (267)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHH
T ss_pred chHHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 127 ILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 127 ~~~~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
+|++++++|++ .++|+++|+||||+++||+++|++.|+++|+||+|+||+|+||..++++.++++|++.|++++|+|++
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~ 161 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADA 161 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCH
Confidence 99999999987 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+|++.+++.+.||+|++|+.|+||.++..++++.++++++|+.+++||+|||||+++||+++....|||||||||+|++.
T Consensus 162 eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~~ 241 (267)
T 3vnd_A 162 DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVKI 241 (267)
T ss_dssp HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 99999999999999999999999999888888999999999999999999999999999997888999999999999999
Q ss_pred hhhcC-CchhHHHHHHHHHHHHHhhC
Q 021527 286 LGEAQ-SPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 286 ~~~~~-~~~~~~~~~~~~~~~l~~~~ 310 (311)
+++.. ++++.++++++|+++|+.++
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~l~~~~ 267 (267)
T 3vnd_A 242 IEAHQHDEATLLAKLAEFTTAMKAAT 267 (267)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhccChHHHHHHHHHHHHHHHhhC
Confidence 98642 34677899999999999874
No 3
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=100.00 E-value=3.1e-72 Score=516.27 Aligned_cols=248 Identities=33% Similarity=0.636 Sum_probs=231.9
Q ss_pred ChhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHH
Q 021527 46 PTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFN 125 (311)
Q Consensus 46 ~m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~ 125 (311)
-|+||++.|+ |++||+|+|+|||+++++.++++.|+++|+|+||||+|||||++|||+||+|+.|||++|++++
T Consensus 3 ~m~ri~~~f~------~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~ 76 (252)
T 3tha_A 3 AMVDFRKFYK------ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIH 76 (252)
T ss_dssp CCCCGGGSCS------SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHhc------CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHH
Confidence 3788998884 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 126 AILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 126 ~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
++|++++++|++ +|+++|+||||+++||.++|+++|+++|+||+|+||||+||..++++.++++|++.|++++|+|++
T Consensus 77 ~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~ 154 (252)
T 3tha_A 77 SVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPK 154 (252)
T ss_dssp HHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCH
T ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcH
Confidence 999999999976 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+|++++++.+.||+|++|+.|+||.++..+.++.++++++|+.+++|+++||||+++||++++.+. ||||||||+|++.
T Consensus 155 eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~~-ADGVIVGSAiVk~ 233 (252)
T 3tha_A 155 ERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKV-ADGVIVGTSIVKC 233 (252)
T ss_dssp HHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTTT-SSEEEECHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHhc-CCEEEECHHHHHH
Confidence 999999999999999999999999987777778899999999999999999999999999999875 9999999999999
Q ss_pred hhhcCCchhHHHHHHHHH
Q 021527 286 LGEAQSPEEGLKELEKFA 303 (311)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~ 303 (311)
+++. ++++.++.+++|.
T Consensus 234 i~~~-~~~~~~~~~~~~~ 250 (252)
T 3tha_A 234 FKQG-NLDIIMKDIEEIF 250 (252)
T ss_dssp TTSS-CHHHHHHHHHHHC
T ss_pred HHhc-CHHHHHHHHHHHh
Confidence 9753 3444445554443
No 4
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=100.00 E-value=4.6e-64 Score=467.55 Aligned_cols=253 Identities=38% Similarity=0.666 Sum_probs=225.4
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|++|+ .|++++++||++||+|+++|||+++.+.+.++.|+++ +|+||||+|||||++|||+||+|+.+||++|+++++
T Consensus 1 m~~~~-~f~~~~~~~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~ 78 (271)
T 1ujp_A 1 MTTLE-AFAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQG 78 (271)
T ss_dssp CCHHH-HHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHH-HHHHHHHcCCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHH
Confidence 78999 9999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHH
Q 021527 127 ILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTD 206 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~e 206 (311)
++++++++|++.++|+++|+|||++++||.++|++.|+++|+||+|+||+|+||..++.+.++++|++.|++++|+++.+
T Consensus 79 ~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~e 158 (271)
T 1ujp_A 79 ALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDA 158 (271)
T ss_dssp HHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHH
T ss_pred HHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHH
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
|++.+++.+.||+|++++.|+||.++..+.++.++++++|+.+++||++||||+|+||++++ .|||||||||+|++.+
T Consensus 159 ri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~ 236 (271)
T 1ujp_A 159 RIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRAL 236 (271)
T ss_dssp HHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhccc
Confidence 99999999999999999999999998877778899999999999999999999999999997 6799999999999988
Q ss_pred hhcCCchhHHHHHHHHHHHHHhhC
Q 021527 287 GEAQSPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~ 310 (311)
++. +.+++|+++++.++
T Consensus 237 ~~~-------~~~~~fv~~l~~~~ 253 (271)
T 1ujp_A 237 EEG-------RSLAPLLQEIRQGL 253 (271)
T ss_dssp HTT-------CCHHHHHHHHHHHH
T ss_pred chH-------HHHHHHHHHHHHHH
Confidence 531 35788888887653
No 5
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=100.00 E-value=1e-62 Score=456.01 Aligned_cols=258 Identities=40% Similarity=0.706 Sum_probs=237.3
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+||++.|+++|++||++||+|+++|||+++.+.++++.|+++|+|+||+|+|||||++|||+||+++.+||++|+++++
T Consensus 1 m~~~~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~ 80 (262)
T 2ekc_A 1 MGRISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFED 80 (262)
T ss_dssp CCHHHHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHH
T ss_pred CchHHHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 127 ILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 127 ~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
++++++++|+.+ ++|+++|+|||+++++|.++|++.++++|+||+++||+|+||..++.+.++++|++.|++++|++++
T Consensus 81 ~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~ 160 (262)
T 2ekc_A 81 VLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTR 160 (262)
T ss_dssp HHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCH
T ss_pred HHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCH
Confidence 999999999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCC-chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASIS-GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~-~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+|++.+++.+.||+|+++..|+||.++..+ +++.++++++|+.+++||++||||+++|+++++ ..|||||||||+|++
T Consensus 161 ~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~~-~~gADgvIVGSai~~ 239 (262)
T 2ekc_A 161 KRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREI-GSFADGVVVGSALVK 239 (262)
T ss_dssp HHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHHH-HTTSSEEEECHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHHH-HcCCCEEEECHHHHh
Confidence 999999999999999999999999998777 777899999999999999999999999999995 567999999999999
Q ss_pred hhhhcCCchhHHHHHHHHHHHHHhhC
Q 021527 285 LLGEAQSPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 310 (311)
.+++ +..+++++|+++++.++
T Consensus 240 ~~~~-----~~~~~~~~~~~~~~~~~ 260 (262)
T 2ekc_A 240 LAGQ-----KKIEDLGNLVKELKEGL 260 (262)
T ss_dssp HHHT-----TCHHHHHHHHHHHHHTT
T ss_pred hhhh-----hhHHHHHHHHHHHHHHh
Confidence 8853 14678999999999875
No 6
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=100.00 E-value=4.7e-61 Score=445.95 Aligned_cols=264 Identities=34% Similarity=0.621 Sum_probs=248.9
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+||++.|+++++++|++|++||++|||+++.+.++++.|+++|+|+||+|+|||||++|||+||+++.+||++|++++.
T Consensus 1 m~~~~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~ 80 (268)
T 1qop_A 1 MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQ 80 (268)
T ss_dssp CCHHHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHH
T ss_pred CchHHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 127 ILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 127 ~~~~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
++++++++|+. +++|+++|+||||++++|.++|++.+.++|+||+++||+|+|+..++.+.++++|++.+++++|+++.
T Consensus 81 ~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~ 160 (268)
T 1qop_A 81 CFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADD 160 (268)
T ss_dssp HHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCH
Confidence 99999999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+|++.+++.+.||+|++++.|+||.++..+++..++++++|+.+++||++||||+|+|++++++..|||||||||+|++.
T Consensus 161 ~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 161 DLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp HHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhh
Confidence 99999999999999999999999998888777889999999999999999999999999999888999999999999999
Q ss_pred hhhc-CCchhHHHHHHHHHHHHHhhC
Q 021527 286 LGEA-QSPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 286 ~~~~-~~~~~~~~~~~~~~~~l~~~~ 310 (311)
+++. .+++...+++++|+++++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 266 (268)
T 1qop_A 241 IEKNLASPKQMLAELRSFVSAMKAAS 266 (268)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HhhcccCchHHHHHHHHHHHHHHHHh
Confidence 8653 233556789999999999876
No 7
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=100.00 E-value=1.3e-54 Score=400.23 Aligned_cols=260 Identities=58% Similarity=1.019 Sum_probs=242.8
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+||++.|+++++++|++|++|+++|||+.+.+.+.++.|+++|+|+||+|+||+||++|||+||+++.+|+++|.+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~ 81 (262)
T 1rd5_A 2 SRPVSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDA 81 (262)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHH
T ss_pred ccHHHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHH
Q 021527 127 ILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTD 206 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~e 206 (311)
.++.++++|+.+++|+++|+|+|+++.+++++ +.++|+||++++|+|+++..++.+.++++|++.+++++|+++.+
T Consensus 82 ~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~----a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e 157 (262)
T 1rd5_A 82 VLEMLREVTPELSCPVVLLSYYKPIMFRSLAK----MKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPED 157 (262)
T ss_dssp HHHHHHHHGGGCSSCEEEECCSHHHHSCCTHH----HHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHH
T ss_pred HHHHHHHHHhcCCCCEEEEecCcHHHHHHHHH----HHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHH
Confidence 99999999999999999999999999888865 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
+++.+.+.+.||+|+++..|+||.++..++...++++++|+.+++||++||||+|++++.++.++|||||||||+|++.+
T Consensus 158 ~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 158 RMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp HHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred HHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 99999898999999999999999987777778889999999999999999999999999999999999999999999998
Q ss_pred hhcCCchhHHHHHHHHHHHHHhhC
Q 021527 287 GEAQSPEEGLKELEKFAKSLKSAL 310 (311)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~ 310 (311)
++..++.+..+.+++|+++|+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~~ 261 (262)
T 1rd5_A 238 GEAASPKQGLRRLEEYARGMKNAL 261 (262)
T ss_dssp HSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred HhccChhHHHHHHHHHHHHHHHhh
Confidence 643334446789999999998764
No 8
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=100.00 E-value=1.4e-46 Score=342.58 Aligned_cols=244 Identities=43% Similarity=0.708 Sum_probs=219.7
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
+||+.|++|+++|||+++.+.+.++.++++ +|+||+|+|||||.+||+++++++.+||++|.|+...++.++++|+.++
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 2 FKDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp CCTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CCCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 468899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+|+++|+|+|+++++|.++|++.+.++|+|+++++|++.++..++.+.++++|++.++.++|.|+.++++.+....++|+
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i 160 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFV 160 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEE
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHH
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 299 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~ 299 (311)
|+++..|+||++.+.++...++++++++.+++||++||||+++|++.++++.|||||||||++++..+++ . +.+
T Consensus 161 ~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~-----~-~~~ 234 (248)
T 1geq_A 161 YLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEK-----G-REA 234 (248)
T ss_dssp EEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHH-----G-GGC
T ss_pred EEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhC-----h-HHH
Confidence 9998888898876666666789999999889999999999999999999999999999999999987431 1 567
Q ss_pred HHHHHHHHhhC
Q 021527 300 EKFAKSLKSAL 310 (311)
Q Consensus 300 ~~~~~~l~~~~ 310 (311)
++|++.+++++
T Consensus 235 ~~~~~~~~~~~ 245 (248)
T 1geq_A 235 TEFLKKKVEEL 245 (248)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 78888877654
No 9
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=100.00 E-value=3.5e-36 Score=274.04 Aligned_cols=177 Identities=20% Similarity=0.249 Sum_probs=158.0
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
-|+++|||+.+.+.+.++.|.++|+|+||+|+ | .|++.++++++++++|+ .++|+++|+
T Consensus 10 ~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~--S------------------~g~t~~~~~~~v~~ir~-~~~Pivl~~ 68 (234)
T 2f6u_A 10 RHITKLDPDRTNTDEIIKAVADSGTDAVMISG--T------------------QNVTYEKARTLIEKVSQ-YGLPIVVEP 68 (234)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTTTCSEEEECC--C------------------TTCCHHHHHHHHHHHTT-SCCCEEECC
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECC--C------------------CCCCHHHHHHHHHHhcC-CCCCEEEec
Confidence 38999999999999999999999999999996 1 68999999999999998 899999999
Q ss_pred cC-cchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHH-----HHH-------HHcC-----CCeEE----EeCCCC-
Q 021527 147 YY-NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQ-----KEA-------MKNK-----IELVL----FTTPTT- 203 (311)
Q Consensus 147 Y~-n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~-----~~~-------~~~g-----i~~I~----lisp~t- 203 (311)
|+ |++ ++|+||+++||||+||..+|. +.+ +++| ++.|+ +++|++
T Consensus 69 y~~n~i-------------~~gvDg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~ 135 (234)
T 2f6u_A 69 SDPSNV-------------VYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSA 135 (234)
T ss_dssp SSCCCC-------------CCCSSEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSH
T ss_pred CCcchh-------------hcCCCEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCc
Confidence 99 766 679999999999999977777 555 7899 99999 788877
Q ss_pred -----------hHHHHHHHHHhCC-----ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHH
Q 021527 204 -----------PTDRMKAIVEASE-----GFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQ 266 (311)
Q Consensus 204 -----------~~eri~~i~~~a~-----gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~ 266 (311)
+++|++.+++.+. +|+|+++ .|+++ ..++++++++.+ ++|+++||||+++|+++
T Consensus 136 ~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~~~--------~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~ 206 (234)
T 2f6u_A 136 VARVTKALCNIDKELAASYALVGEKLFNLPIIYIEY-SGTYG--------NPELVAEVKKVLDKARLFYGGGIDSREKAR 206 (234)
T ss_dssp HHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEEC-TTSCC--------CHHHHHHHHHHCSSSEEEEESCCCSHHHHH
T ss_pred eEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEeC-CCCcc--------hHHHHHHHHHhCCCCCEEEEecCCCHHHHH
Confidence 5688999999887 9999997 66432 357899999999 99999999999999999
Q ss_pred HHHHcCCcEEEEhhHhhchhh
Q 021527 267 QVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 267 ~v~~~GADGvIVGSaiv~~~~ 287 (311)
++++ |||+|||||++++..+
T Consensus 207 ~~~~-gAd~VIVGSa~v~~~~ 226 (234)
T 2f6u_A 207 EMLR-YADTIIVGNVIYEKGI 226 (234)
T ss_dssp HHHH-HSSEEEECHHHHHHCH
T ss_pred HHHh-CCCEEEEChHHHhCHH
Confidence 9999 8999999999999664
No 10
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=100.00 E-value=8.5e-36 Score=272.50 Aligned_cols=176 Identities=26% Similarity=0.317 Sum_probs=155.4
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
-|+++|||+++.+.+.++.|.++|+|+||+|+ ..|++.++++++++++|+ .++|+++|+
T Consensus 10 ~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~--------------------S~Gvt~~~~~~~v~~ir~-~~~Pivlm~ 68 (240)
T 1viz_A 10 KHVFKLDPNKDLPDEQLEILCESGTDAVIIGG--------------------SDGVTEDNVLRMMSKVRR-FLVPCVLEV 68 (240)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTSCCSEEEECC------------------------CHHHHHHHHHHHTT-SSSCEEEEC
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECC--------------------CCCCCHHHHHHHHHHhhC-cCCCEEEec
Confidence 38999999999999999999999999999995 168999999999999998 899999999
Q ss_pred cC-cchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHH-----HHHHHHcC-----CCeEE----EeCCCCh-------
Q 021527 147 YY-NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL-----QKEAMKNK-----IELVL----FTTPTTP------- 204 (311)
Q Consensus 147 Y~-n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~-----~~~~~~~g-----i~~I~----lisp~t~------- 204 (311)
|+ |++ ++|+||+|+||||+||..++ ...++++| ++.|+ +++|++.
T Consensus 69 y~~n~i-------------~~G~dg~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~ 135 (240)
T 1viz_A 69 SAIEAI-------------VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEA 135 (240)
T ss_dssp SCGGGC-------------CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTB
T ss_pred Cccccc-------------cCCCCEEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeecc
Confidence 99 666 57999999999999988777 68899999 99999 8899876
Q ss_pred -----HHHHHHHHHhCC----ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCc
Q 021527 205 -----TDRMKAIVEASE----GFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGAD 274 (311)
Q Consensus 205 -----~eri~~i~~~a~----gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GAD 274 (311)
++|++.+++.+. +|+|+++ .|+++ ..++++++++.+ ++|+++||||+++|+++++++ |||
T Consensus 136 d~~~~~~~~~~~a~~g~~~~~~~VYl~s-~G~~~--------~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd 205 (240)
T 1viz_A 136 DADLNMDDIVAYARVSELLQLPIFYLEY-SGVLG--------DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HAD 205 (240)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCSEEEEEC-TTSCC--------CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCS
T ss_pred CCCCCHHHHHHHHHhCcccCCCEEEEeC-CCccC--------hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCC
Confidence 578888887775 9999998 66532 357899999999 999999999999999999998 999
Q ss_pred EEEEhhHhhchh
Q 021527 275 GVIVGSAMVKLL 286 (311)
Q Consensus 275 GvIVGSaiv~~~ 286 (311)
+|||||++++..
T Consensus 206 ~VIVGSa~v~~~ 217 (240)
T 1viz_A 206 VIVVGNAVYEDF 217 (240)
T ss_dssp EEEECTHHHHCH
T ss_pred EEEEChHHHhCH
Confidence 999999999865
No 11
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=99.97 E-value=1.6e-30 Score=236.25 Aligned_cols=174 Identities=17% Similarity=0.250 Sum_probs=151.7
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
|++.+|||.+.+.+.++.+.++|+|.||+|. ..|++.+++++.++++|+ .++|+++|.|
T Consensus 14 h~~~~DPdk~~~~~~l~~~~~~GtDaI~vGg--------------------s~gvt~~~~~~~v~~ik~-~~~Piil~p~ 72 (235)
T 3w01_A 14 HIFKLDPAKHISDDDLDAICMSQTDAIMIGG--------------------TDDVTEDNVIHLMSKIRR-YPLPLVLEIS 72 (235)
T ss_dssp EEEEECTTSCCCHHHHHHHHTSSCSEEEECC--------------------SSCCCHHHHHHHHHHHTT-SCSCEEEECC
T ss_pred EEEeECCCCcCCHHHHHHHHHcCCCEEEECC--------------------cCCcCHHHHHHHHHHhcC-cCCCEEEecC
Confidence 8899999999888899999999999999993 357899999999999998 9999999998
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHH-----HHHHHHcCC-----CeEE----EeCCCChHHH------
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL-----QKEAMKNKI-----ELVL----FTTPTTPTDR------ 207 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~-----~~~~~~~gi-----~~I~----lisp~t~~er------ 207 (311)
|+ +.| ..|+|++++|||+.++..+| .+.++++|+ +.|+ ++.|+++..|
T Consensus 73 -~~------~~~-----~~gaD~il~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~ 140 (235)
T 3w01_A 73 -NI------ESV-----MPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANT 140 (235)
T ss_dssp -CS------TTC-----CTTCSEEEEEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCC
T ss_pred -CH------HHh-----hcCCCEEEEccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCc
Confidence 53 223 23999999999999875555 467899999 9998 7899998885
Q ss_pred ---HHHHHHhCC--------ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcE
Q 021527 208 ---MKAIVEASE--------GFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADG 275 (311)
Q Consensus 208 ---i~~i~~~a~--------gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADG 275 (311)
++.++..+. +|+|+++ .|+||. .++++++|+.+ ++|+++||||+++|+++++.+ ||||
T Consensus 141 ~~~~e~iaa~A~~a~~~~g~~~vY~e~-sG~~g~--------~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~ 210 (235)
T 3w01_A 141 DLTTEDLEAYAQMVNHMYRLPVMYIEY-SGIYGD--------VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADT 210 (235)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEC-TTSCCC--------HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSE
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEec-CCCcCC--------HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCE
Confidence 777777644 9999998 888762 47899999998 899999999999999999998 8999
Q ss_pred EEEhhHhhc
Q 021527 276 VIVGSAMVK 284 (311)
Q Consensus 276 vIVGSaiv~ 284 (311)
|||||++++
T Consensus 211 VVVGSai~~ 219 (235)
T 3w01_A 211 IIVGDIIYK 219 (235)
T ss_dssp EEECTHHHH
T ss_pred EEECCceec
Confidence 999999998
No 12
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=99.95 E-value=2.6e-27 Score=214.55 Aligned_cols=188 Identities=23% Similarity=0.281 Sum_probs=155.5
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
|++.+|||.+.+.+.++++.++|+|+||+|. ..|++.+++++.++++|+ +++|+++|.|
T Consensus 9 h~~~iDPdk~~~~~~~~~~~~~GtD~i~vGG--------------------s~gvt~~~~~~~v~~ik~-~~~Pvvlfp~ 67 (228)
T 3vzx_A 9 HVFKLDPNKDLPDEQLEILCESGTDAVIIGG--------------------SDGVTEDNVLRMMSKVRR-FLVPCVLEVS 67 (228)
T ss_dssp EEEEECTTSCCCTTHHHHHHTSSCSEEEECC--------------------CSCCCHHHHHHHHHHHTT-SSSCEEEECS
T ss_pred EEEeECCCCCCCHHHHHHHHHcCCCEEEECC--------------------cCCCCHHHHHHHHHHhhc-cCCCEEEeCC
Confidence 8899999998777889999999999999993 246889999999999998 9999999998
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHH-----HHHHHcCC-----CeEE----EeCCCChH--------
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQ-----KEAMKNKI-----ELVL----FTTPTTPT-------- 205 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~-----~~~~~~gi-----~~I~----lisp~t~~-------- 205 (311)
...- |. .|+|++++|+|+.++..+|. +.++++|+ +.++ ++.|+++.
T Consensus 68 ~~~~-------v~-----~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~ 135 (228)
T 3vzx_A 68 AIEA-------IV-----PGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADA 135 (228)
T ss_dssp CGGG-------CC-----SCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCC
T ss_pred CHHH-------cc-----ccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccC
Confidence 6422 21 59999999999987755554 77899997 8888 68888887
Q ss_pred ----HHHHHHHHhC----CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEE
Q 021527 206 ----DRMKAIVEAS----EGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 206 ----eri~~i~~~a----~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGv 276 (311)
+++..++..+ .+|+|+.+ .|.+| + .++++++|+.+ ++|+++||||+++|+++++. .|||+|
T Consensus 136 ~~~~e~~~~~a~~a~~~g~~~VYld~-sG~~~-----~---~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~V 205 (228)
T 3vzx_A 136 DLNMDDIVAYARVSELLQLPIFYLEY-SGVLG-----D---IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVI 205 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEC-TTSCC-----C---HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEecC-CCCcC-----C---HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEE
Confidence 7787777766 48999987 56544 1 47899999998 79999999999999999999 699999
Q ss_pred EEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 277 IVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 277 IVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
||||++++-. +.++++++.++.
T Consensus 206 VVGSa~v~~p----------~~~~~~v~a~~~ 227 (228)
T 3vzx_A 206 VVGNAVYEDF----------DRALKTVAAVKG 227 (228)
T ss_dssp EECTHHHHCH----------HHHHHHHHHHHC
T ss_pred EEChHHhcCH----------HHHHHHHHHHhc
Confidence 9999999832 345666666553
No 13
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.94 E-value=3.2e-27 Score=214.24 Aligned_cols=192 Identities=19% Similarity=0.275 Sum_probs=161.7
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.++|||+++| +..+.+.++.+.++|+|++|+++ +||++++.. .. .++.++++|+.++.|+.
T Consensus 6 ~i~psila~D--~~~l~~~i~~~~~~Gad~ihldi------~DG~fvp~~-----~~------g~~~v~~lr~~~~~~~~ 66 (230)
T 1tqj_A 6 VVAPSILSAD--FSRLGEEIKAVDEAGADWIHVDV------MDGRFVPNI-----TI------GPLIVDAIRPLTKKTLD 66 (230)
T ss_dssp EEEEBGGGSC--GGGHHHHHHHHHHTTCSEEEEEE------EBSSSSSCB-----CB------CHHHHHHHGGGCCSEEE
T ss_pred EEEEEeeecC--HhHHHHHHHHHHHcCCCEEEEEE------EecCCCcch-----hh------hHHHHHHHHhhcCCcEE
Confidence 3789999999 68899999999999999999994 788877631 12 24688999988888876
Q ss_pred --EEecCcchhccCHHHHHHHHHHcCCcEEEecCC--ChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 144 --LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV--PLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 144 --lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl--p~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+|+ .|| ++|++.+.++|+||+++++. +.++..++.+.++++|+.....++|+|+.++++.+....+ |+
T Consensus 67 vhlmv-~dp------~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D-~v 138 (230)
T 1tqj_A 67 VHLMI-VEP------EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCD-LI 138 (230)
T ss_dssp EEEES-SSG------GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCS-EE
T ss_pred EEEEc-cCH------HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCC-EE
Confidence 887 354 67899999999999999998 8778888999999999999999999999999887766555 99
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|++++.+++|.+ ...+...+.++++|+.+ ++||.++|||+. +++.++.++|||++||||++++
T Consensus 139 ~~msv~pg~ggq-~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 139 LIMSVNPGFGGQ-SFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp EEESSCC----C-CCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred EEEEeccccCCc-cCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 999999988864 45666778899999877 799999999986 9999999999999999999997
No 14
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.94 E-value=4.9e-26 Score=210.48 Aligned_cols=198 Identities=17% Similarity=0.201 Sum_probs=149.1
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCc
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYN 149 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n 149 (311)
++|||+.+.+. +.|+++|+|+||+|+||+||. |.+++++++++++++ +|++. |
T Consensus 19 t~g~p~~~~~~---~~l~~~Gad~ielg~pr~~~~----------------g~~~~~~~~~l~~~~----~~~~p----n 71 (264)
T 1xm3_A 19 TGKYPSFDIQK---EAVAVSESDILTFAVRRMNIF----------------EASQPNFLEQLDLSK----YTLLP----N 71 (264)
T ss_dssp CSCSSCHHHHH---HHHHHHTCSEEEEETTSSTTC-----------------------CTTCCGGG----SEEEE----E
T ss_pred ecCCCCHHHHH---HHHHHcCCeEEEEcccccccC----------------CCCHHHHHHHHHhcC----CeEcC----C
Confidence 89999999885 588889999999999999875 456667777765443 44432 5
Q ss_pred chhccCHH---HHHHHHHHcCCcEE----EecCCC--hhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 150 PILKRGVD---NFMSTVRDIGIRGL----VVPDVP--LEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 150 ~i~~~g~~---~fi~~~~~aGadGv----iipDlp--~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
+...++.+ +|++.+.++|.+++ +++|.| +++..++.+.++++ |+..++++.|+ .++++++.+...+
T Consensus 72 ~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~--~~~a~~~~~~gad 149 (264)
T 1xm3_A 72 TAGASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDD--VVLARKLEELGVH 149 (264)
T ss_dssp CTTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSC--HHHHHHHHHHTCS
T ss_pred ccccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCC--HHHHHHHHHhCCC
Confidence 55555665 48899999988888 678887 57888899999998 99988888776 3677777777777
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLK 297 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~ 297 (311)
|+ ++..++||++.+... .+.++++++.+++||+++|||++++|+.++.++|||||+|||+|++.. ++ .+
T Consensus 150 ~v--~~~~~~~Gt~~~~~~--~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~----dp---~~ 218 (264)
T 1xm3_A 150 AI--MPGASPIGSGQGILN--PLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGAD----DP---VK 218 (264)
T ss_dssp CB--EECSSSTTCCCCCSC--HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSS----SH---HH
T ss_pred EE--EECCcccCCCCCCCC--HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCC----CH---HH
Confidence 77 666678887655433 467889988889999999999999999999999999999999999843 22 33
Q ss_pred HHHHHHHHHH
Q 021527 298 ELEKFAKSLK 307 (311)
Q Consensus 298 ~~~~~~~~l~ 307 (311)
.+++|.+.++
T Consensus 219 ~~~~l~~~v~ 228 (264)
T 1xm3_A 219 MARAMKLAVE 228 (264)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4455555544
No 15
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.93 E-value=2.1e-25 Score=201.41 Aligned_cols=210 Identities=16% Similarity=0.272 Sum_probs=167.3
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
+..++|||+++| +..+.+.++.+.++|+|++|++ ++||++++.. . + .++.++++|+.++.|
T Consensus 6 ~~~i~psi~a~d--~~~l~~~i~~~~~~Gad~i~l~------i~Dg~fv~~~-----~--~----~~~~~~~lr~~~~~~ 66 (228)
T 1h1y_A 6 AAKIAPSMLSSD--FANLAAEADRMVRLGADWLHMD------IMDGHFVPNL-----T--I----GAPVIQSLRKHTKAY 66 (228)
T ss_dssp CCEEEEBGGGSC--GGGHHHHHHHHHHTTCSEEEEE------EEBSSSSSCB-----C--B----CHHHHHHHHTTCCSE
T ss_pred CCeEEEEeeeCC--HHHHHHHHHHHHHcCCCEEEEE------EecCCcCcch-----h--h----CHHHHHHHHhhcCCc
Confidence 456899999999 6888999999999999999998 4677665531 0 1 146888888777667
Q ss_pred EE--EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhH-HHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CC
Q 021527 142 IA--LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEET-ESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SE 216 (311)
Q Consensus 142 ii--lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~-~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~ 216 (311)
+. +|++ || ++|++.+.++|+||+++++.+.++. .++.+.++++|+..++.+.|+|+.++++.+... ..
T Consensus 67 ~~v~lmv~-d~------~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~ 139 (228)
T 1h1y_A 67 LDCHLMVT-NP------SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPV 139 (228)
T ss_dssp EEEEEESS-CG------GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCC
T ss_pred EEEEEEec-CH------HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCC
Confidence 55 7773 43 5689999999999999998877777 788888999999989889999998888887664 67
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhH
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEG 295 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~ 295 (311)
+|+|+++..+++|. +..++...+.++++|+.+ ++|++++|||+. +++.++.++|||++||||++++. .++.+.
T Consensus 140 d~vl~~sv~pg~~g-~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~----~d~~~~ 213 (228)
T 1h1y_A 140 ELVLVMTVEPGFGG-QKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGA----AEPGEV 213 (228)
T ss_dssp SEEEEESSCTTCSS-CCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTS----SCHHHH
T ss_pred CEEEEEeecCCCCc-ccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC----CCHHHH
Confidence 89999998865554 356667778899999988 899999999985 99999999999999999999973 234444
Q ss_pred HHHHHHHH
Q 021527 296 LKELEKFA 303 (311)
Q Consensus 296 ~~~~~~~~ 303 (311)
.+++++.+
T Consensus 214 ~~~l~~~~ 221 (228)
T 1h1y_A 214 ISALRKSV 221 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554433
No 16
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.92 E-value=1.2e-24 Score=192.97 Aligned_cols=185 Identities=21% Similarity=0.220 Sum_probs=151.0
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEec
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTY 147 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y 147 (311)
+.+.+|++++..+.++.+. .|+|+||+|.||+ +..| ++.++++|+. .++|+ |
T Consensus 5 ~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~----------------~~~g------~~~i~~ir~~~~~~~i----~ 57 (211)
T 3f4w_A 5 LALDELTLPEAMVFMDKVV-DDVDIIEVGTPFL----------------IREG------VNAIKAIKEKYPHKEV----L 57 (211)
T ss_dssp EEECSCCHHHHHHHHHHHG-GGCSEEEECHHHH----------------HHHT------THHHHHHHHHCTTSEE----E
T ss_pred EEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHH----------------Hhcc------HHHHHHHHHhCCCCEE----E
Confidence 3556799999999999996 7999999998775 1123 4688888887 58897 4
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEE-EeCCCChHHHHHHHHHhCCceEEEEecC
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVL-FTTPTTPTDRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~-lisp~t~~eri~~i~~~a~gfiY~vs~~ 225 (311)
+|..+..+.+.|++.+.++|+|++++++.+.++ ..++.+.++++|++.+. +.+|.++.++++.+.+...+++|+. .
T Consensus 58 ~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~--~ 135 (211)
T 3f4w_A 58 ADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVH--T 135 (211)
T ss_dssp EEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE--C
T ss_pred EEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc--C
Confidence 477777788889999999999999999998744 57899999999998765 4678888888888888777888774 4
Q ss_pred CccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 226 GVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
|.+|.+.. +...+.++++|+.. ++|++++|||+ ++++.++.++|||+++|||++++.
T Consensus 136 g~~g~~~~--~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 136 GTDQQAAG--RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp CHHHHHTT--CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred CCcccccC--CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCC
Confidence 66665432 22347789999875 89999999997 899999999999999999999983
No 17
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.92 E-value=3.1e-25 Score=199.74 Aligned_cols=193 Identities=18% Similarity=0.238 Sum_probs=157.9
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.+++|++++|| ..+.+.++.+.++|+|++|+++ +||++++.. ...++.++++++.++.|+.
T Consensus 12 ~i~p~i~a~d~--~~~~~~i~~~~~~G~d~i~l~~------~dg~f~~~~-----------~~~~~~i~~l~~~~~~~~~ 72 (230)
T 1rpx_A 12 IVSPSILSANF--SKLGEQVKAIEQAGCDWIHVDV------MDGRFVPNI-----------TIGPLVVDSLRPITDLPLD 72 (230)
T ss_dssp EEEEBGGGSCG--GGHHHHHHHHHHTTCCCEEEEE------EBSSSSSCB-----------CCCHHHHHHHGGGCCSCEE
T ss_pred EEEEEeecCCH--HHHHHHHHHHHHCCCCEEEEee------ccCCccccc-----------ccCHHHHHHHHhccCCcEE
Confidence 48999999997 5889999999999999999984 677665521 1125688889888788999
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCC--ChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV--PLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl--p~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
++.|.|+ .++|++.+.++|+|++++++. +.++..++.+.++++|+.....+.|+|+.++++.+... ..++|+
T Consensus 73 v~l~vnd-----~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~-~d~vl~ 146 (230)
T 1rpx_A 73 VHLMIVE-----PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDA-VDLVLI 146 (230)
T ss_dssp EEEESSS-----HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTT-CSEEEE
T ss_pred EEEEecC-----HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhh-CCEEEE
Confidence 9999886 468999999999999999998 77777788889999999888888888888887665433 348888
Q ss_pred EecC-CccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 222 VSSI-GVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~-G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
++.. |.+|. ...+...+.++++|+.+ ++|++++|||+ ++++.++.++|||||+|||++++
T Consensus 147 ~~~~pg~~g~--~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 147 MSVNPGFGGQ--SFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp ESSCTTCSSC--CCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred EEEcCCCCCc--cccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 8875 45554 33455567788888876 79999999998 79999999999999999999997
No 18
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.88 E-value=7.7e-22 Score=176.89 Aligned_cols=204 Identities=15% Similarity=0.132 Sum_probs=152.0
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEe
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFT 146 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~ 146 (311)
.+-+.+|++++..+.++.+ +.|+|++|+|+|+. +..| ++.++++|+. .+.|++++.
T Consensus 10 ilalD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~----------------~~~G------~~~i~~lr~~~~~~~i~ld~ 66 (218)
T 3jr2_A 10 QIALDQTNLTDAVAVASNV-ASYVDVIEVGTILA----------------FAEG------MKAVSTLRHNHPNHILVCDM 66 (218)
T ss_dssp EEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHH----------------HHHT------THHHHHHHHHCTTSEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHh-cCCceEEEeCcHHH----------------HhcC------HHHHHHHHHhCCCCcEEEEE
Confidence 3567899999999999997 67999999998772 2223 5688899887 578998887
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEE-EeCCCChHHHHHHHHHhCCceEEEEec
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVL-FTTPTTPTDRMKAIVEASEGFVYLVSS 224 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~-lisp~t~~eri~~i~~~a~gfiY~vs~ 224 (311)
+... ..+.|++.+.++|+|++++++.+.++ ..++.+.++++|++... ++.|.|+ ++++.+.+. |+.|++..
T Consensus 67 ~l~d----~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~~~~~~~~--g~d~v~~~ 139 (218)
T 3jr2_A 67 KTTD----GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM-QDAKAWVDL--GITQAIYH 139 (218)
T ss_dssp EECS----CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH-HHHHHHHHT--TCCEEEEE
T ss_pred eecc----cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH-HHHHHHHHc--Cccceeee
Confidence 6542 34678999999999999999998765 57889999999998776 7777776 676666543 89998776
Q ss_pred CCccCCCCC--CCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHH
Q 021527 225 IGVTGARAS--ISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKF 302 (311)
Q Consensus 225 ~G~TG~~~~--~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~ 302 (311)
.++++...+ ..+...+.+++++. .++|++++|||+ ++++.++.++|||++||||+|++.- +..+.+ ++
T Consensus 140 ~~~~~~~~g~~~~~~~l~~i~~~~~-~~~pi~v~GGI~-~~~~~~~~~aGAd~vvvGsaI~~a~-------dp~~a~-~l 209 (218)
T 3jr2_A 140 RSRDAELAGIGWTTDDLDKMRQLSA-LGIELSITGGIV-PEDIYLFEGIKTKTFIAGRALAGAE-------GQQTAA-AL 209 (218)
T ss_dssp CCHHHHHHTCCSCHHHHHHHHHHHH-TTCEEEEESSCC-GGGGGGGTTSCEEEEEESGGGSHHH-------HHHHHH-HH
T ss_pred eccccccCCCcCCHHHHHHHHHHhC-CCCCEEEECCCC-HHHHHHHHHcCCCEEEEchhhcCCC-------CHHHHH-HH
Confidence 665533222 23333344444443 479999999996 8999999999999999999999742 123345 66
Q ss_pred HHHHHhhCC
Q 021527 303 AKSLKSALP 311 (311)
Q Consensus 303 ~~~l~~~~~ 311 (311)
.+.+++.++
T Consensus 210 ~~~~~~~~~ 218 (218)
T 3jr2_A 210 REQIDRFWP 218 (218)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHhhCC
Confidence 666666553
No 19
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.85 E-value=9e-21 Score=168.76 Aligned_cols=195 Identities=11% Similarity=0.180 Sum_probs=148.1
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.+.++++++|+ ..+.+.++.+.++|+|++|+. .+||+..+ ++...++.++++++.++.|+.
T Consensus 5 ~~~~~i~a~D~--~~~~~~~~~~~~~G~~~i~~~------~~dg~~~~-----------~~~~g~~~i~~i~~~~~~~~~ 65 (220)
T 2fli_A 5 KIAPSILAADY--ANFASELARIEETDAEYVHID------IMDGQFVP-----------NISFGADVVASMRKHSKLVFD 65 (220)
T ss_dssp EEEEBGGGSCG--GGHHHHHHHHHHTTCCEEEEE------EEBSSSSS-----------CBCBCHHHHHHHHTTCCSEEE
T ss_pred EEEEEEEeCCH--HHHHHHHHHHHHcCCCEEEEE------eecCCCCC-----------ccccCHHHHHHHHHhCCCCEE
Confidence 38899999998 788899999999999999998 33443211 101114688888887788998
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+..+.|+. +++++.+.++|+|++++++.+.++..++.+.++++|...+..+.|.++.++++.+... ..++|+++
T Consensus 66 v~l~v~d~-----~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~-~d~vl~~~ 139 (220)
T 2fli_A 66 CHLMVVDP-----ERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDL-VDQVLIMT 139 (220)
T ss_dssp EEEESSSG-----GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTT-CSEEEEES
T ss_pred EEEeecCH-----HHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhh-CCEEEEEE
Confidence 88886643 4578899999999999987766677778888888998877778888887877665433 34777776
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
..+.++.+ ...+...+.++++|+.+ +.|+++.|||+ ++++.++.++||||++|||++++.
T Consensus 140 ~~~g~~g~-~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 140 VNPGFGGQ-AFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp SCTTCSSC-CCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred ECCCCccc-ccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 55333332 23444456677777654 78999999998 799999999999999999999984
No 20
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.82 E-value=1.3e-19 Score=159.96 Aligned_cols=181 Identities=19% Similarity=0.145 Sum_probs=131.2
Q ss_pred eCCC-CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEE--E
Q 021527 70 TAGD-PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIAL--F 145 (311)
Q Consensus 70 ~~G~-P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiil--m 145 (311)
++.| |++++..+.++.+.+ |+|++|+|.|++ +.+| ++.++++|+.+ +.|+++ |
T Consensus 5 ~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~--~~~g--------------------~~~i~~l~~~~~~~~i~~~l~ 61 (207)
T 3ajx_A 5 VAIDLLSTEAALELAGKVAE-YVDIIELGTPLI--KAEG--------------------LSVITAVKKAHPDKIVFADMK 61 (207)
T ss_dssp EEECCSCHHHHHHHHHHHGG-GCSEEEECHHHH--HHHC--------------------THHHHHHHHHSTTSEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHH--HhhC--------------------HHHHHHHHHhCCCCeEEEEEE
Confidence 4444 999999999999988 999999997763 2233 34677787776 788775 6
Q ss_pred ecCcchhccCHHHHHHHHHHcCCcEEEecCCCh-hhHHHHHHHHHHcCCCe-EEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 146 TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPL-EETESLQKEAMKNKIEL-VLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 146 ~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~-ee~~~~~~~~~~~gi~~-I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
.| |. .+.|++.+.++|+|++++++.+. +...++++.++++|+.. +.+.+++++.++++.+.+. |..|+..
T Consensus 62 ~~-di-----~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~--g~d~v~~ 133 (207)
T 3ajx_A 62 TM-DA-----GELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRAL--GAKFVEM 133 (207)
T ss_dssp EC-SC-----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHT--TCSEEEE
T ss_pred ec-Cc-----cHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHh--CCCEEEE
Confidence 54 51 36689999999999999987765 56777888999989875 3344666777777666443 4444413
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..++++...+.+..- +.++++++. +.|+++.+||+ ++++.++.+.|||+++|||++++
T Consensus 134 ~~~~~~~~~g~~~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 134 HAGLDEQAKPGFDLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp ECCHHHHTSTTCCTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHT
T ss_pred EecccccccCCCchH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccC
Confidence 334443222222211 456655543 78999999998 89999999999999999999998
No 21
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.81 E-value=6.3e-20 Score=167.29 Aligned_cols=192 Identities=14% Similarity=0.095 Sum_probs=154.2
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL 144 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiil 144 (311)
+.|+|++.|+. .+.+.++.+.++|+|++|++ ++||.++.. +..| +..++.+|+.++.-+.+
T Consensus 16 i~psila~D~~--~l~~~i~~~~~~gad~lhvD------vmDG~fvpn-----~t~G------~~~v~~lr~~~~~DvhL 76 (237)
T 3cu2_A 16 LSVGILSANWL--QLNEEVTTLLENQINVLHFD------IADGQFSSL-----FTVG------AIGIKYFPTHCFKDVHL 76 (237)
T ss_dssp EEEEGGGSCGG--GHHHHHHHHHHTTCCEEEEE------EEBSSSSSC-----BCBC------THHHHTSCTTSEEEEEE
T ss_pred EEEeeeeCCcc--cHHHHHHHHHHcCCCEEEEE------EecCccccc-----hhhh------HHHHHHHhhhCCCCeEE
Confidence 88999999985 67778999999999999998 456754421 1122 35788888765447888
Q ss_pred EecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHc---------CCCeEEEeCCCChHHHHHHHHHhC
Q 021527 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKN---------KIELVLFTTPTTPTDRMKAIVEAS 215 (311)
Q Consensus 145 m~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~---------gi~~I~lisp~t~~eri~~i~~~a 215 (311)
|.+ | .++|++.+.++|+|++.++....+...+..+.++++ |......+.|.|+.++++.+.+..
T Consensus 77 Mv~-~------p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~ 149 (237)
T 3cu2_A 77 MVR-N------QLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQI 149 (237)
T ss_dssp ECS-C------HHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTC
T ss_pred EEE-C------HHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcC
Confidence 865 4 478999999999999999877766777888999999 988888889999988887765543
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHH--cCCcEEEEhhHhhch
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAG--WGADGVIVGSAMVKL 285 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~--~GADGvIVGSaiv~~ 285 (311)
.+++++++...+|.+. ..+...+.++++|+.. ++||.|.|||+ ++++.++.+ +|||++|+||++++.
T Consensus 150 -D~vlvMsv~pgfggq~-f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 150 -DVIQLLTLDPRNGTKY-PSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp -SEEEEESEETTTTEEC-CHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred -ceeeeeeeccCcCCee-cChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 4888888888788664 3455667888888875 58999999997 899999999 999999999999984
No 22
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.81 E-value=7.3e-20 Score=166.22 Aligned_cols=182 Identities=16% Similarity=0.244 Sum_probs=143.3
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc--EEEEecCcchh
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP--IALFTYYNPIL 152 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP--iilm~Y~n~i~ 152 (311)
|+....+.++.+ ++|+|++|++ ++||.++.. .++ .+..++.+|+.++.| +.+|++ ||
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvD------vmDG~fvpn---------~t~--G~~~v~~lr~~~~~~~dvhLmv~-dp-- 69 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHID------IMDGHFVPN---------LTL--SPFFVSQVKKLATKPLDCHLMVT-RP-- 69 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEE------EECSSSSSC---------CCB--CHHHHHHHHTTCCSCEEEEEESS-CG--
T ss_pred ChhhHHHHHHHH-HcCCCEEEEE------EEeCccCcc---------chh--cHHHHHHHHhccCCcEEEEEEec-CH--
Confidence 346778888999 9999999998 667765532 111 246888888876666 677775 43
Q ss_pred ccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCC
Q 021527 153 KRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGAR 231 (311)
Q Consensus 153 ~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~ 231 (311)
++|++.+.++|+|+++++--. .....++.+.++++|++....+.|.||.++++.+... -.+++++|+...+|.+
T Consensus 70 ----~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~-~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 70 ----QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHK-ADKITVMTVDPGFAGQ 144 (231)
T ss_dssp ----GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGG-CSEEEEESSCTTCSSC
T ss_pred ----HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhc-CCEEEEeeeccCcCCc
Confidence 568899999999999997222 2236788999999999988888999998888777654 3488888988878765
Q ss_pred CCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh-hHhhc
Q 021527 232 ASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVG-SAMVK 284 (311)
Q Consensus 232 ~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVG-Saiv~ 284 (311)
. ..+...+.++++|+.. +++|.|+|||+ ++++.++.++|||++|+| |++++
T Consensus 145 ~-f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~ 201 (231)
T 3ctl_A 145 P-FIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFN 201 (231)
T ss_dssp C-CCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGG
T ss_pred c-ccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhC
Confidence 4 4455667888888864 68999999998 699999999999999999 99997
No 23
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.80 E-value=1.3e-19 Score=164.13 Aligned_cols=208 Identities=15% Similarity=0.225 Sum_probs=152.4
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~i 140 (311)
..+.|=|.+-|. ....+.++.++++|+|++++. +.||.++...+ .| .+.++++|+. .++
T Consensus 5 ~~i~psil~~D~--~~l~~~i~~l~~~g~d~~h~D------VmDg~Fvpn~~-----~G------~~~v~~ir~~~~~~~ 65 (228)
T 3ovp_A 5 CKIGPSILNSDL--ANLGAECLRMLDSGADYLHLD------VMDGHFVPNIT-----FG------HPVVESLRKQLGQDP 65 (228)
T ss_dssp CEEEEBCTTSCG--GGHHHHHHHHHHTTCSCEEEE------EEBSSSSSCBC-----BC------HHHHHHHHHHHCSSS
T ss_pred cEeeeeheeCCc--hhHHHHHHHHHHcCCCEEEEE------ecCCCcCcccc-----cC------HHHHHHHHHhhCCCC
Confidence 345555555443 667788899999999999997 66664432110 11 3477788776 577
Q ss_pred cEE--EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 141 PIA--LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 141 Pii--lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
|+- +|. .| +++|++.+.++|+|.+.++....++..++.+.++++|++....+.|.|+.++++.+... ..+
T Consensus 66 ~~dvhLmv-~~------p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~-~D~ 137 (228)
T 3ovp_A 66 FFDMHMMV-SK------PEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQ-IDM 137 (228)
T ss_dssp CEEEEEEC-SC------GGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGG-CSE
T ss_pred cEEEEEEe-CC------HHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhcc-CCe
Confidence 754 553 23 35688899999999999985444467788999999999999999999999988777654 458
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLK 297 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~ 297 (311)
++++|+....|.+. ..+...+.++++|+.. +.|+.|+|||+ ++++.++.++|||++|+||++++. .++.+.++
T Consensus 138 Vl~msv~pGf~Gq~-f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a----~dp~~~~~ 211 (228)
T 3ovp_A 138 ALVMTVEPGFGGQK-FMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS----EDPRSVIN 211 (228)
T ss_dssp EEEESSCTTTCSCC-CCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC----SCHHHHHH
T ss_pred EEEeeecCCCCCcc-cCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC----CCHHHHHH
Confidence 88888754444443 4455567799999875 68999999997 799999999999999999999973 23444455
Q ss_pred HHHHHH
Q 021527 298 ELEKFA 303 (311)
Q Consensus 298 ~~~~~~ 303 (311)
++++.+
T Consensus 212 ~l~~~~ 217 (228)
T 3ovp_A 212 LLRNVC 217 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 24
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.80 E-value=1.4e-19 Score=165.84 Aligned_cols=193 Identities=18% Similarity=0.211 Sum_probs=145.5
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPI 142 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPi 142 (311)
.+.|=+.+-|. ....+.++.++++|+|++++. +.||.++..-+ .| .+.++.+|+.+ ++|+
T Consensus 29 ~i~pSilsaD~--~~L~~~i~~l~~~G~d~lHvD------VmDg~FVpnit-----~G------~~~v~~lr~~~p~~~l 89 (246)
T 3inp_A 29 QINPSILSADL--ARLGDDVKAVLAAGADNIHFD------VMDNHYVPNLT-----FG------PMVLKALRDYGITAGM 89 (246)
T ss_dssp EEEEBGGGSCG--GGHHHHHHHHHHTTCCCEEEE------EEBSSSSSCBC-----CC------HHHHHHHHHHTCCSCE
T ss_pred eeehhhhcCCh--hhHHHHHHHHHHcCCCEEEEE------ecCCCcCcchh-----cC------HHHHHHHHHhCCCCeE
Confidence 34455554433 567788899999999999997 66665432110 11 35777888776 7886
Q ss_pred EEE-ecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 143 ALF-TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 143 ilm-~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
-+- -..| +++|++.+.++|+|.+.++....++..+..+.++++|++..+.+.|.|+.++++.+... ..+|++
T Consensus 90 dvHLmv~~------p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~-vD~Vlv 162 (246)
T 3inp_A 90 DVHLMVKP------VDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESN-IDRVLI 162 (246)
T ss_dssp EEEEECSS------CHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGG-CSEEEE
T ss_pred EEEEeeCC------HHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhc-CCEEEE
Confidence 542 2333 36799999999999999986555567888999999999999999999999998777653 458888
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+|+...+|.+. ..+...+.++++|+.. +.+|.|+|||+ ++++.++.++|||.+|+||++.+
T Consensus 163 MsV~PGfgGQ~-fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 163 MSVNPGFGGQK-FIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp ECSCTTC--CC-CCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHT
T ss_pred eeecCCCCCcc-cchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhC
Confidence 88875555553 3345567788888753 58999999998 79999999999999999999997
No 25
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.80 E-value=1.2e-18 Score=159.40 Aligned_cols=193 Identities=17% Similarity=0.168 Sum_probs=138.4
Q ss_pred EEEEEeCCCCCh-hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 65 LIPYITAGDPDL-STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 65 li~yi~~G~P~~-~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
..+++.-|+-.. ....+.++.+.++|+|.|++ +|+.++| ...|.+ ++.++++++.+++|++
T Consensus 17 ~~v~~~~g~~~~~~~~~~~a~~~~~~Ga~~i~v----~d~~~~~----------~~~g~~----~~~i~~i~~~~~iPvi 78 (266)
T 2w6r_A 17 FMVFTHSGKKNTGILLRDWVVEVEKRGAGEILL----TSIDRDG----------TKSGYD----TEMIRFVRPLTTLPII 78 (266)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEE----EETTTSS----------CSSCCC----HHHHHHHGGGCCSCEE
T ss_pred EEEEEcCCeeccCCCHHHHHHHHHHCCCCEEEE----EecCccc----------CCCccc----HHHHHHHHHhcCCCEE
Confidence 344555554322 35789999999999999999 5776665 123444 4688899988999999
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChh---hHHHHHHHHHHcC--CCeE-EEeCC----------------
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLE---ETESLQKEAMKNK--IELV-LFTTP---------------- 201 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~e---e~~~~~~~~~~~g--i~~I-~lisp---------------- 201 (311)
++++.|+.. -++.+.++|+|++++++.+++ +...+++.++.+| .+.+ ..+++
T Consensus 79 ~~ggi~~~~------~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~ 152 (266)
T 2w6r_A 79 ASGGAGKME------HFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKK 152 (266)
T ss_dssp EESCCCSTH------HHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTE
T ss_pred EECCCCCHH------HHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCce
Confidence 999988543 256677899999999998874 5666777777777 4333 33333
Q ss_pred ---CChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 202 ---TTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 202 ---~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.++.++++.+.+...+++|+-+. ...|...+.+ .++++++++.+++||+++|||++++|+.++++.|||||+|
T Consensus 153 ~~~~~~~e~~~~~~~~G~~~i~~t~~-~~~g~~~g~~---~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 153 NTGILLRDWVVEVEKRGAGEILLTSI-DRDGTKSGYD---TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALA 228 (266)
T ss_dssp EEEEEHHHHHHHHHHTTCSEEEEEET-TTTTTCSCCC---HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred ecchhHHHHHHHHHHcCCCEEEEEee-cCCCCcCCCC---HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHc
Confidence 24567777777777888888432 2344433332 4789999999999999999999999999999999999999
Q ss_pred hhHhhch
Q 021527 279 GSAMVKL 285 (311)
Q Consensus 279 GSaiv~~ 285 (311)
||+|++.
T Consensus 229 gsal~~~ 235 (266)
T 2w6r_A 229 ASVFHFR 235 (266)
T ss_dssp STTTC--
T ss_pred cHHHHcC
Confidence 9999874
No 26
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.78 E-value=8e-18 Score=152.59 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=134.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCH
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGV 156 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~ 156 (311)
+...+.++.++++|+|.|++ +|+.++|. .....++.++++++.+++|+++++++|+.
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v----~d~~~~~~--------------~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~----- 87 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVF----LDISATHE--------------ERAILLDVVARVAERVFIPLTVGGGVRSL----- 87 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEE----EECCSSTT--------------CHHHHHHHHHHHHTTCCSCEEEESSCCSH-----
T ss_pred CCHHHHHHHHHHcCCCEEEE----EcCCcccc--------------CccccHHHHHHHHHhCCCCEEEECCcCCH-----
Confidence 45689999999999999877 56666542 12234678899999999999999998743
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCe-EEEeCC-------------------CChHHHHHHHHHhC-
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIEL-VLFTTP-------------------TTPTDRMKAIVEAS- 215 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~-I~lisp-------------------~t~~eri~~i~~~a- 215 (311)
++++.+.++|+|++++++.++++...+.+..+.++.+. +..++. .++.++++++.+..
T Consensus 88 -~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 166 (252)
T 1ka9_F 88 -EDARKLLLSGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGA 166 (252)
T ss_dssp -HHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred -HHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCC
Confidence 57888999999999999887776655666666666432 233332 23467777776663
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
..++|.. .+.+|...+.+ .++++++++.+++||+++|||++++|+.++.+.|||||+|||++++.
T Consensus 167 ~~i~~~~--~~~~g~~~g~~---~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 167 GEILLTS--MDRDGTKEGYD---LRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp CEEEEEE--TTTTTTCSCCC---HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred CEEEEec--ccCCCCcCCCC---HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 4455542 23445444432 47899999988999999999999999999999999999999999973
No 27
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.74 E-value=8.7e-17 Score=149.28 Aligned_cols=186 Identities=17% Similarity=0.235 Sum_probs=130.5
Q ss_pred CccEEEEEeCCCCCh------hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhh
Q 021527 62 KVALIPYITAGDPDL------STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVV 135 (311)
Q Consensus 62 ~~~li~yi~~G~P~~------~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir 135 (311)
+..+|.=+=--.|+. ..-.++++.++++||++|++- +|+ ...+ .-++.++++|
T Consensus 51 ~~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~~~GA~~isvl---td~----~~f~--------------Gs~~~l~~ir 109 (272)
T 3qja_A 51 GIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVV---TEQ----RRFQ--------------GSLDDLDAVR 109 (272)
T ss_dssp SCEEEEEEC-------------CHHHHHHHHHHTTCSEEEEE---CCG----GGHH--------------HHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCccCCCCCHHHHHHHHHHcCCCEEEEe---cCh----hhcC--------------CCHHHHHHHH
Confidence 356676553333332 134789999999999999995 222 1211 2256888888
Q ss_pred ccCCCcEEEEecCcchhccCHHHH-HHHHHHcCCcEEEe--cCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHH
Q 021527 136 PQMSCPIALFTYYNPILKRGVDNF-MSTVRDIGIRGLVV--PDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIV 212 (311)
Q Consensus 136 ~~~~iPiilm~Y~n~i~~~g~~~f-i~~~~~aGadGvii--pDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~ 212 (311)
+.+++|++...+ .++.| ++.+.++|+|+|++ .|++.++..++.+.++++|++.+.-+ ++. +.++...
T Consensus 110 ~~v~lPvl~kdf-------iid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev--~t~-ee~~~A~ 179 (272)
T 3qja_A 110 ASVSIPVLRKDF-------VVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEV--HTE-QEADRAL 179 (272)
T ss_dssp HHCSSCEEEESC-------CCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE--SSH-HHHHHHH
T ss_pred HhCCCCEEECcc-------ccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEc--CCH-HHHHHHH
Confidence 889999997642 34566 88899999999998 58888889999999999999865443 454 4444444
Q ss_pred HhCCceEEEEecCCccCCC-CCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 213 EASEGFVYLVSSIGVTGAR-ASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 213 ~~a~gfiY~vs~~G~TG~~-~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+. |..|+ |+|+.. .....++ +.+.++++.+ ++|++++|||+|++|+.++.++|||||+|||+|++.
T Consensus 180 ~~--Gad~I----Gv~~r~l~~~~~dl-~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 180 KA--GAKVI----GVNARDLMTLDVDR-DCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp HH--TCSEE----EEESBCTTTCCBCT-THHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred HC--CCCEE----EECCCcccccccCH-HHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 43 55454 333321 1122332 4567777765 799999999999999999999999999999999984
No 28
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.74 E-value=3.5e-18 Score=153.73 Aligned_cols=147 Identities=23% Similarity=0.344 Sum_probs=107.6
Q ss_pred HhhccCCCcEEE-EecC-c-chhccCHHHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHcCCCeEEEeCCCChH
Q 021527 133 EVVPQMSCPIAL-FTYY-N-PILKRGVDNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKNKIELVLFTTPTTPT 205 (311)
Q Consensus 133 ~ir~~~~iPiil-m~Y~-n-~i~~~g~~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~gi~~I~lisp~t~~ 205 (311)
.+++.+++|++- ..++ + ..|. | +-+++.++++|+|++++++ +|++|..++.+.++++|+.+++.+.+++..
T Consensus 47 ~v~~~~~~~v~aqd~~~~~~ga~t-G-ei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~ 124 (219)
T 2h6r_A 47 MIVENVNIPVYAQHIDNINPGSHT-G-HILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNINTS 124 (219)
T ss_dssp HHHHHCCSCBEESCCCSCCSBSCT-T-CCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSHHH
T ss_pred HHHHHcCCcEEEEECChhhcCCcc-C-chHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCchHH
Confidence 444445788766 2221 1 1121 1 3458999999999999986 889999999999999999999999987765
Q ss_pred HHHHHHHHhCCceEEEEecC--CccCCC--CCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 206 DRMKAIVEASEGFVYLVSSI--GVTGAR--ASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~--G~TG~~--~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
+|+. +...+++|+.++. | ||.+ +..++.+.+.++.+|+.. ++|+++||||+++++++.+.+.|+||++|||
T Consensus 125 ~~~~---~~~~~~i~~~~~~~iG-tG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGs 200 (219)
T 2h6r_A 125 KAVA---ALSPDCIAVEPPELIG-TGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLAS 200 (219)
T ss_dssp HHHT---TTCCSEEEECCCC---------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESH
T ss_pred HHHH---hCCCCEEEEEeccccc-cCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcH
Confidence 5543 3466899998766 5 8842 222333556677777765 7999999999999999999999999999999
Q ss_pred Hhhch
Q 021527 281 AMVKL 285 (311)
Q Consensus 281 aiv~~ 285 (311)
++++.
T Consensus 201 Ai~~~ 205 (219)
T 2h6r_A 201 GVVKA 205 (219)
T ss_dssp HHHTC
T ss_pred HHhCc
Confidence 99984
No 29
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.73 E-value=6e-18 Score=153.06 Aligned_cols=177 Identities=20% Similarity=0.224 Sum_probs=133.7
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVD 157 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~ 157 (311)
...+.++.+.++|+|.|++ +|+.+++ -..+.+ ++.+++++ ..++|++++++.+..
T Consensus 31 ~~~~~a~~~~~~Gad~i~v----~d~~~~~----------~~~~~~----~~~i~~i~-~~~ipvi~~Ggi~~~------ 85 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHV----VDLSNAI----------ENSGEN----LPVLEKLS-EFAEHIQIGGGIRSL------ 85 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEE----EEHHHHH----------HCCCTT----HHHHHHGG-GGGGGEEEESSCCSH------
T ss_pred CHHHHHHHHHHcCCCEEEE----ecccccc----------cCCchh----HHHHHHHH-hcCCcEEEECCCCCH------
Confidence 4689999999999999997 4543322 123445 46888888 789999999987633
Q ss_pred HHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEE-eCC---------------CChHHHHHHHHHhCCceEEE
Q 021527 158 NFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF-TTP---------------TTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 158 ~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~l-isp---------------~t~~eri~~i~~~a~gfiY~ 221 (311)
++++.+.++|+|+|++++.++++...+.+. +++| +.+.+ +++ .++.++++++.+..-+++|+
T Consensus 86 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~ 163 (241)
T 1qo2_A 86 DYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REID-VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVH 163 (241)
T ss_dssp HHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTTT-CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEECchHhhChHHHHHH-HHcC-CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEE
Confidence 467788889999999998777665556666 7777 55433 443 25667777776767788887
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHc-----C-CcEEEEhhHhhch
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGW-----G-ADGVIVGSAMVKL 285 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~-----G-ADGvIVGSaiv~~ 285 (311)
-+. ..+|...+.+ .++++++++.+++||+++|||++++|+.++.+. | ||||+|||+|++.
T Consensus 164 t~~-~~~g~~~g~~---~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 164 TEI-EKDGTLQEHD---FSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp EET-THHHHTCCCC---HHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred Eee-cccccCCcCC---HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 543 2344333332 478899988889999999999999999999998 9 9999999999974
No 30
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.73 E-value=2e-16 Score=143.36 Aligned_cols=179 Identities=17% Similarity=0.186 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVD 157 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~ 157 (311)
...+.++.++++|+|.|++- |+..++. .....++.++++++.+++|+++.++.+..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~----d~~~~~~--------------~~~~~~~~i~~i~~~~~ipvi~~ggI~~~------ 86 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFL----DITASVE--------------KRKTMLELVEKVAEQIDIPFTVGGGIHDF------ 86 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEE----ESSCSSS--------------HHHHHHHHHHHHHTTCCSCEEEESSCCSH------
T ss_pred CHHHHHHHHHHcCCCEEEEE----CCchhhc--------------CCcccHHHHHHHHHhCCCCEEEeCCCCCH------
Confidence 45889999999999999984 4433331 11133578899998899999999887643
Q ss_pred HHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCC-eEEEeCCC-------------------ChHHHHHHHHHhCCc
Q 021527 158 NFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIE-LVLFTTPT-------------------TPTDRMKAIVEASEG 217 (311)
Q Consensus 158 ~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~-~I~lisp~-------------------t~~eri~~i~~~a~g 217 (311)
++++.+.++|+|+|+++...+++...+.+.++.+|.+ .+..+++. ++.++++.+.+..-+
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~ 166 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAG 166 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCC
Confidence 4588888999999999877666655566677777753 33445552 456777776665434
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.+.+. ...|...+.+ .+.++++++.+++||++++||++++|+.++.+.|||||+|||++++
T Consensus 167 ~i~~~~~-~~~g~~~g~~---~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 167 EILLTSI-DRDGTKSGYD---TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp EEEEEET-TTTTSCSCCC---HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred EEEEEec-cCCCCCCCCC---HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 3333322 2334333332 4678999888899999999999999999999999999999999997
No 31
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.73 E-value=1.2e-15 Score=138.31 Aligned_cols=203 Identities=16% Similarity=0.186 Sum_probs=145.0
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 124 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~ 124 (311)
|+.+++..+.+..+|+-...+=-.+|.|-. ....++++++.++|+..|+++ +
T Consensus 4 ~~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~---------~----------------- 57 (229)
T 3q58_A 4 MSLLARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE---------G----------------- 57 (229)
T ss_dssp HHHHHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE---------S-----------------
T ss_pred HHHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC---------C-----------------
Confidence 555666666664455433333447777754 568999999999999999995 1
Q ss_pred HHHHHHHHHhhccCCCcEEEEe---cCc-chhccCHHHHHHHHHHcCCcEEEecC---CChhhHHHHHHHHHHcCCCeEE
Q 021527 125 NAILSMLKEVVPQMSCPIALFT---YYN-PILKRGVDNFMSTVRDIGIRGLVVPD---VPLEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 125 ~~~~~~i~~ir~~~~iPiilm~---Y~n-~i~~~g~~~fi~~~~~aGadGviipD---lp~ee~~~~~~~~~~~gi~~I~ 197 (311)
++.++++|+.+++|++... |.+ +++.....+.++.+.++|+|.+++-- +.++...++.+.++++|+..
T Consensus 58 ---~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v-- 132 (229)
T 3q58_A 58 ---IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLA-- 132 (229)
T ss_dssp ---HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEE--
T ss_pred ---HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEE--
Confidence 2478899999999987432 333 24555555678889999999886521 23467788889999887654
Q ss_pred EeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEE
Q 021527 198 FTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 198 lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGv 276 (311)
++..++.++. +... ..|+.|+. ...|.|+......++ .++++++++. ++||++.+||+|++|+.++.+.|||||
T Consensus 133 ~~~v~t~eea-~~a~--~~Gad~Ig~~~~g~t~~~~~~~~~-~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 133 MADCSTVNEG-ISCH--QKGIEFIGTTLSGYTGPITPVEPD-LAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp EEECSSHHHH-HHHH--HTTCSEEECTTTTSSSSCCCSSCC-HHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred EEecCCHHHH-HHHH--hCCCCEEEecCccCCCCCcCCCCC-HHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 3455555443 3332 35777775 345655443222333 4789999887 999999999999999999999999999
Q ss_pred EEhhHhhch
Q 021527 277 IVGSAMVKL 285 (311)
Q Consensus 277 IVGSaiv~~ 285 (311)
+|||+|++.
T Consensus 208 ~VGsai~~p 216 (229)
T 3q58_A 208 TVGSAITRI 216 (229)
T ss_dssp EECHHHHCH
T ss_pred EEchHhcCh
Confidence 999999984
No 32
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.73 E-value=1.8e-16 Score=141.36 Aligned_cols=184 Identities=14% Similarity=0.162 Sum_probs=125.1
Q ss_pred EEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEE
Q 021527 66 IPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALF 145 (311)
Q Consensus 66 i~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm 145 (311)
+..|+......+.+.+.++.+.++|+|+||+..++.+|..-|+ +. +..+.++++.+..++|+++.
T Consensus 20 i~~It~~~~~~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~-~~--------------~~~~~l~~~~~~~~v~v~v~ 84 (227)
T 2tps_A 20 VYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEA-RI--------------KFAEKAQAACREAGVPFIVN 84 (227)
T ss_dssp EEEEECGGGCSSCHHHHHHHHHHHTCSEEEECCCSTTCCCHHH-HH--------------HHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEECCccccchHHHHHHHHHHCCCCEEEEecCCCCHhHHHH-HH--------------HHHHHHHHHHHHcCCeEEEc
Confidence 3445544322122889999999999999999988877744443 11 22334445444567888773
Q ss_pred ecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE-ec
Q 021527 146 TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV-SS 224 (311)
Q Consensus 146 ~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v-s~ 224 (311)
++++.+.++|+|++++++.+.+ . ....+.+|. .+..+++.++.+ +....+ .|+.|+. +.
T Consensus 85 ------------~~~~~a~~~gad~v~l~~~~~~-~---~~~~~~~g~-~~~~~s~~t~~e-~~~a~~--~g~d~v~~~~ 144 (227)
T 2tps_A 85 ------------DDVELALNLKADGIHIGQEDAN-A---KEVRAAIGD-MILGVSAHTMSE-VKQAEE--DGADYVGLGP 144 (227)
T ss_dssp ------------SCHHHHHHHTCSEEEECTTSSC-H---HHHHHHHTT-SEEEEEECSHHH-HHHHHH--HTCSEEEECC
T ss_pred ------------CHHHHHHHcCCCEEEECCCccC-H---HHHHHhcCC-cEEEEecCCHHH-HHHHHh--CCCCEEEECC
Confidence 3567788999999999887643 2 233344676 666777777765 444333 4566663 32
Q ss_pred CCccCCCCC-CCchHHHHHHHHhhcCC-CcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 225 IGVTGARAS-ISGHVQTLLREIKESST-KPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 225 ~G~TG~~~~-~~~~~~~~l~~vk~~~~-~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
...|+.+.+ ..+...+.++++++.++ +|+++++||+ ++++.++.+.|||||+|||++.+.
T Consensus 145 v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 145 IYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQA 206 (227)
T ss_dssp SSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTS
T ss_pred CcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcC
Confidence 234554433 22223467888888877 9999999998 899999999999999999999873
No 33
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.72 E-value=1.7e-15 Score=137.44 Aligned_cols=217 Identities=16% Similarity=0.133 Sum_probs=150.5
Q ss_pred ChhHHHHHHHHHHHcCCccEEEEEeCCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCC
Q 021527 46 PTVGLAETFTRLKKQGKVALIPYITAGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTN 123 (311)
Q Consensus 46 ~m~~i~~~f~~~~~~~~~~li~yi~~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~ 123 (311)
.|+.+.+..+.+..+++-...+--.+|.|-. ....++++++.++|+..|+++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~---------~---------------- 57 (232)
T 3igs_A 3 AMSLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE---------G---------------- 57 (232)
T ss_dssp CCCHHHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE---------S----------------
T ss_pred hHHHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC---------C----------------
Confidence 3666666666664455433334447777754 568999999999999999995 1
Q ss_pred HHHHHHHHHHhhccCCCcEEEEe---cCc-chhccCHHHHHHHHHHcCCcEEEecC---CChhhHHHHHHHHHHcCCCeE
Q 021527 124 FNAILSMLKEVVPQMSCPIALFT---YYN-PILKRGVDNFMSTVRDIGIRGLVVPD---VPLEETESLQKEAMKNKIELV 196 (311)
Q Consensus 124 ~~~~~~~i~~ir~~~~iPiilm~---Y~n-~i~~~g~~~fi~~~~~aGadGviipD---lp~ee~~~~~~~~~~~gi~~I 196 (311)
++.++++|+.+++|++-.. |.+ +++.....+.++.+.++|+|.+++-- ..++...++.+.++++|+..
T Consensus 58 ----~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v- 132 (232)
T 3igs_A 58 ----IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLT- 132 (232)
T ss_dssp ----HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEE-
T ss_pred ----HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEE-
Confidence 2478899999999985322 332 24444445678889999999887632 12366788888999887654
Q ss_pred EEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcE
Q 021527 197 LFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADG 275 (311)
Q Consensus 197 ~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADG 275 (311)
++..++.++ .+... ..|+.|+. ...|.|+......++ .++++++++. ++||++.+||+|++|+.++++.||||
T Consensus 133 -~~~v~t~ee-a~~a~--~~Gad~Ig~~~~g~t~~~~~~~~~-~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~Gadg 206 (232)
T 3igs_A 133 -MADCSSVDD-GLACQ--RLGADIIGTTMSGYTTPDTPEEPD-LPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGAWA 206 (232)
T ss_dssp -EEECCSHHH-HHHHH--HTTCSEEECTTTTSSSSSCCSSCC-HHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred -EEeCCCHHH-HHHHH--hCCCCEEEEcCccCCCCCCCCCCC-HHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCE
Confidence 345555544 33332 35777775 345555432222333 4788999887 99999999999999999999999999
Q ss_pred EEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 276 VIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 276 vIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
|+|||+|++.. +..++|.+.++.
T Consensus 207 V~VGsal~~p~----------~~~~~~~~~i~~ 229 (232)
T 3igs_A 207 VTVGSAITRLE----------HICGWYNDALKK 229 (232)
T ss_dssp EEECHHHHCHH----------HHHHHHHHHHHH
T ss_pred EEEehHhcCHH----------HHHHHHHHHHHH
Confidence 99999999733 234556555554
No 34
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.71 E-value=4.1e-16 Score=139.93 Aligned_cols=181 Identities=19% Similarity=0.174 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCH
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGV 156 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~ 156 (311)
+...+.++.+.++|+|.|++- |+..+++ +....++.++++++.+++|+++.++.+..
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~----~~~~~~~--------------~~~~~~~~i~~i~~~~~ipvi~~g~i~~~----- 89 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAIL----DITAAPE--------------GRATFIDSVKRVAEAVSIPVLVGGGVRSL----- 89 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEE----ECCCCTT--------------THHHHHHHHHHHHHHCSSCEEEESSCCSH-----
T ss_pred ccHHHHHHHHHHcCCCEEEEE----eCCcccc--------------CCcccHHHHHHHHHhcCCCEEEECCCCCH-----
Confidence 467899999999999999995 3333321 11123568888988889999998876633
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeE-EEeCC-------------------CChHHHHHHHHHhCC
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV-LFTTP-------------------TTPTDRMKAIVEASE 216 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I-~lisp-------------------~t~~eri~~i~~~a~ 216 (311)
+ .++.+.++|+|+++++...+++...+.+.++.+|.+.+ ..++. .++.++++.+.+..-
T Consensus 90 ~-~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~ 168 (253)
T 1h5y_A 90 E-DATTLFRAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGA 168 (253)
T ss_dssp H-HHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred H-HHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCC
Confidence 2 45778889999999986555545556666777775422 11111 245677777777767
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+++++.+.. .+|...+.+ .+.++++++.+++|+++++||++++++.++.+.|||||+|||+|++.
T Consensus 169 d~i~~~~~~-~~g~~~~~~---~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~ 233 (253)
T 1h5y_A 169 GEILLTSID-RDGTGLGYD---VELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFR 233 (253)
T ss_dssp SEEEEEETT-TTTTCSCCC---HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred CEEEEeccc-CCCCcCcCC---HHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcC
Confidence 788776543 334333332 46788888888999999999999999999999999999999999873
No 35
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=99.69 E-value=1.2e-16 Score=152.71 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=146.7
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEc----CCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEec
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELG----VPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTY 147 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG----~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y 147 (311)
..+.++.+++++.|+++|+|.||+| +|+|+|.+ ||.. .+.++.++++++. .++|+.+|+|
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~--------------~~~~e~l~~i~~~~~~~~i~~l~~ 90 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNY-GFGR--------------HTDLEYIEAVAGEISHAQIATLLL 90 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTT-BCCS--------------SCHHHHHHHHHTTCSSSEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcc-cCCC--------------CCHHHHHHHHHhhCCCCEEEEEec
Confidence 3567899999999999999999998 99999987 7522 2235677777765 5789999976
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCCh---hhHHHHHHHHHHcCCCeEEEe--CCCChHHHHHHHHHhCCce-EEE
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPL---EETESLQKEAMKNKIELVLFT--TPTTPTDRMKAIVEASEGF-VYL 221 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~---ee~~~~~~~~~~~gi~~I~li--sp~t~~eri~~i~~~a~gf-iY~ 221 (311)
.| ++.++|++.+.++|+|++.+++ +. ++..++.+.++++|++.++.+ +++++++++.++++...++ +|+
T Consensus 91 p~----~~~~~~i~~a~~aGvd~v~I~~-~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~ 165 (345)
T 1nvm_A 91 PG----IGSVHDLKNAYQAGARVVRVAT-HCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC 165 (345)
T ss_dssp BT----TBCHHHHHHHHHHTCCEEEEEE-ETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE
T ss_pred CC----cccHHHHHHHHhCCcCEEEEEE-eccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE
Confidence 43 4568999999999999999985 44 578889999999999988887 8888889999998887777 788
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEE------eeCCCCHHHHHHHHHcCCcEE
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS--TKPVAV------GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~v------GfGIst~e~v~~v~~~GADGv 276 (311)
++..+++|.. .|..+.++++++|+.+ ++|+.+ |.|+. +.....++|||-|
T Consensus 166 i~l~DT~G~~--~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avA---n~laA~~aGa~~v 223 (345)
T 1nvm_A 166 IYMADSGGAM--SMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVA---NSIVAVEEGCDRV 223 (345)
T ss_dssp EEEECTTCCC--CHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHH---HHHHHHHTTCCEE
T ss_pred EEECCCcCcc--CHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHH---HHHHHHHcCCCEE
Confidence 8888899975 3778899999999998 789888 77774 4556677998765
No 36
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.69 E-value=1.2e-15 Score=134.52 Aligned_cols=172 Identities=19% Similarity=0.193 Sum_probs=113.5
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHh---hccCCCcEE
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV---VPQMSCPIA 143 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~i---r~~~~iPii 143 (311)
.+|++.. .. ...+.++.+.++|+|+|++..|+.++ ++.++.++++ .+..++|++
T Consensus 18 ~~It~~~-~~-~~~~~~~~~~~~G~~~i~l~~~~~~~---------------------~~~~~~~~~l~~~~~~~~v~v~ 74 (215)
T 1xi3_A 18 YVITDRR-LK-PEVESVREALEGGATAIQMRIKNAPT---------------------REMYEIGKTLRQLTREYDALFF 74 (215)
T ss_dssp EEECCTT-TS-CHHHHHHHHHHTTCSEEEECCCSCCH---------------------HHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCc-hh-hHHHHHHHHHHCCCCEEEECCCCCCH---------------------HHHHHHHHHHHHHHHHcCCeEE
Confidence 4456543 33 78899999999999999998765331 1222333333 334677877
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+. ++++.+.++|+|+++++ |++.++..++ . ...+..++..++.+ +....+ .|+.|+
T Consensus 75 v~------------~~~~~a~~~gad~v~l~~~~~~~~~~~~~----~---~~~~~~v~~~t~~e-~~~~~~--~g~d~i 132 (215)
T 1xi3_A 75 VD------------DRVDVALAVDADGVQLGPEDMPIEVAKEI----A---PNLIIGASVYSLEE-ALEAEK--KGADYL 132 (215)
T ss_dssp EE------------SCHHHHHHHTCSEEEECTTSCCHHHHHHH----C---TTSEEEEEESSHHH-HHHHHH--HTCSEE
T ss_pred Ec------------ChHHHHHHcCCCEEEECCccCCHHHHHHh----C---CCCEEEEecCCHHH-HHHHHh--cCCCEE
Confidence 72 35578889999999998 5555443332 1 23455556666655 333323 456666
Q ss_pred Ee-cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 222 VS-SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 222 vs-~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.. ....|+++.+..+...+.++++++..++|+++++||+ ++++.++.+.|+|||+|||++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 133 GAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp EEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHT
T ss_pred EEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhC
Confidence 42 1123444333333345678888887899999999998 89999999999999999999987
No 37
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.64 E-value=3.6e-16 Score=181.12 Aligned_cols=166 Identities=24% Similarity=0.319 Sum_probs=142.0
Q ss_pred CHHHHHHHHHHhhccC--CCcEEE-EecCcchh---ccCHHHHHHHHHHcC--CcEEEec-CCC-hhhHHHHHHHHHHcC
Q 021527 123 NFNAILSMLKEVVPQM--SCPIAL-FTYYNPIL---KRGVDNFMSTVRDIG--IRGLVVP-DVP-LEETESLQKEAMKNK 192 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~--~iPiil-m~Y~n~i~---~~g~~~fi~~~~~aG--adGviip-Dlp-~ee~~~~~~~~~~~g 192 (311)
+.+.+.+.|+++|+.+ ..|+.+ |.|+||.+ ++|.++|++.+.+.| +|||+++ |+| +||..++.+.++++|
T Consensus 464 ~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~G 543 (3089)
T 3zen_D 464 TEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVG 543 (3089)
T ss_dssp SHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcC
Confidence 6778888999998766 556533 46889987 788899999999999 9999998 999 799999999999999
Q ss_pred CCeEEEeCCCChHH-HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHH----HHHhhcCCCcEEEeeCCCCHHHHHH
Q 021527 193 IELVLFTTPTTPTD-RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLL----REIKESSTKPVAVGFGISKPEHVQQ 267 (311)
Q Consensus 193 i~~I~lisp~t~~e-ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l----~~vk~~~~~Pv~vGfGIst~e~v~~ 267 (311)
+.+|.+..+++.+. |+.++.....+|+|++...|.+|.......++..++ .++|+.+++||++||||.+++++..
T Consensus 544 i~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaa 623 (3089)
T 3zen_D 544 ISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAE 623 (3089)
T ss_dssp HCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHH
T ss_pred CEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHH
Confidence 99998887776554 677787778899999999998887655455666777 8899989999999999999999999
Q ss_pred HH-----------HcCCcEEEEhhHhhchhhh
Q 021527 268 VA-----------GWGADGVIVGSAMVKLLGE 288 (311)
Q Consensus 268 v~-----------~~GADGvIVGSaiv~~~~~ 288 (311)
++ ..|||||+|||+|+...+.
T Consensus 624 al~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 624 YLSGRWAEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp HHHTGGGGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred HhccccccccCccCCCCCEEEecHHHHhCccc
Confidence 99 9999999999999998864
No 38
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=99.63 E-value=8.3e-15 Score=135.74 Aligned_cols=181 Identities=16% Similarity=0.146 Sum_probs=123.2
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCC--HHHHHHHHHHhhccCC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTN--FNAILSMLKEVVPQMS 139 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~--~~~~~~~i~~ir~~~~ 139 (311)
++.++..|.|..+..+...+.++.+.++|.|.|++| |+ |++ .+++.+.++.+|+.++
T Consensus 38 ~~~~~~liDPdK~~~~~~~~~~~~~~~sGtDai~VG---S~------------------~vt~~~~~~~~~v~~ik~~~~ 96 (286)
T 3vk5_A 38 QPGPVHIIDPFKVPVTEAVEKAAELTRLGFAAVLLA---ST------------------DYESFESHMEPYVAAVKAATP 96 (286)
T ss_dssp CCEEEEEECTTTSCHHHHHHHHHHHHHTTCSCEEEE---CS------------------CCSSHHHHHHHHHHHHHHHCS
T ss_pred cCCceEEECCCCCCcHHHHHHHHHHHhcCCCEEEEc---cC------------------CCCcchHHHHHHHHHHHHhCC
Confidence 677887774444444677779999999999999999 44 366 6677889999998899
Q ss_pred CcEEE-Ee--cCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHH-H---------HHH----HHcCCCeEEE----
Q 021527 140 CPIAL-FT--YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL-Q---------KEA----MKNKIELVLF---- 198 (311)
Q Consensus 140 iPiil-m~--Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~-~---------~~~----~~~gi~~I~l---- 198 (311)
+|+++ +- ..|+.- + .-|+|++++|-+-...-..| . ..+ +++| +.++.
T Consensus 97 lPvil~fPP~~g~~~~---i--------~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~ 164 (286)
T 3vk5_A 97 LPVVLHFPPRPGAGFP---V--------VRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALT 164 (286)
T ss_dssp SCEEEECCCBTTTBSC---C--------CTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEE
T ss_pred CCEEEECCCCCCCccc---c--------ccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEE
Confidence 99999 75 123211 1 12689999986554221111 1 113 5666 65542
Q ss_pred eCCC------------ChHHHH--HHHHHhC----CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeC
Q 021527 199 TTPT------------TPTDRM--KAIVEAS----EGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFG 258 (311)
Q Consensus 199 isp~------------t~~eri--~~i~~~a----~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfG 258 (311)
+.+. .+.+.. ..++..+ .-++|+-. ++ + ..+ .++++++++.+ ++|+++|||
T Consensus 165 v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~gad~G~~lV~LD~----~~-~-~v~---~e~V~~I~~~~~~~iPV~vGGG 235 (286)
T 3vk5_A 165 FGEDPRTGDLLGTVPVSTASTEEIDRYLHVARAFGFHMVYLYS----RN-E-HVP---PEVVRHFRKGLGPDQVLFVSGN 235 (286)
T ss_dssp CSCCHHHHHHHCBCCCCCSSSHHHHHHHHHHHHTTCSEEEEEC----SS-S-CCC---HHHHHHHHHHSCTTCEEEEESS
T ss_pred ECCCCceeeeeCCCCCCCHHHHHHHHHHHHHHHcCCCEEEEcC----CC-C-cCC---HHHHHHHHHhcCCCCCEEEEeC
Confidence 2222 111222 3344432 25788752 22 1 222 37899999988 899999999
Q ss_pred CCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 259 ISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 259 Ist~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+|+|++++++++|||+|||||++++
T Consensus 236 Irs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 236 VRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp CCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred CCCHHHHHHHHHcCCCEEEECchhhc
Confidence 99999999999999999999999987
No 39
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.62 E-value=6.4e-15 Score=133.34 Aligned_cols=192 Identities=17% Similarity=0.236 Sum_probs=135.8
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIA 143 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPii 143 (311)
+.|=|.+- |+....+.++.+.++|+|++|++ +.||.++.. +..| ...++.+|+.+ +.|+.
T Consensus 8 i~pSila~--D~~~l~~~i~~~~~~g~d~iHvD------vmDg~fvpn-----~t~G------~~~v~~lr~~~p~~~~d 68 (227)
T 1tqx_A 8 IAPSVLAS--NISKLAEETQRMESLGAEWIHLD------VMDMHFVPN-----LSFG------PPVINNLKKYTKSIFFD 68 (227)
T ss_dssp EEEBGGGS--CGGGHHHHHHHHHHTTCSEEEEE------EEBSSSSSC-----BCCC------HHHHHHHGGGCSSCEEE
T ss_pred EEeehhcC--ChhhHHHHHHHHHHcCCCEEEEE------EEeCCcCcc-----hhcC------HHHHHHHHHhCCCCcEE
Confidence 33444443 34677888999999999999998 445532221 0011 35888888877 77754
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChh-hHHHHHH---HHHHcCCCeEEEeCCCChHHHHHHHHHhC-Cce
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLE-ETESLQK---EAMKNKIELVLFTTPTTPTDRMKAIVEAS-EGF 218 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~e-e~~~~~~---~~~~~gi~~I~lisp~t~~eri~~i~~~a-~gf 218 (311)
+-..-+. .+++++.+.+ +|.+.++=-... ...+..+ .++++|.+...-+.|.|+.++++.+.... -.+
T Consensus 69 vhLmv~d-----p~~~i~~~~~--Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~ 141 (227)
T 1tqx_A 69 VHLMVEY-----PEKYVPLLKT--SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINT 141 (227)
T ss_dssp EEEESSC-----GGGGGGGCTT--SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSE
T ss_pred EEEEEcC-----HHHHHHHHHh--CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCE
Confidence 4332232 2345555544 888877521111 3455667 89999998888889999988888776532 567
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
++++++....|.+ ...+...+.++++|+.. +.+|.|.+||+ ++++.++.++|||.+|+||++.+
T Consensus 142 VlvmsV~pGf~gq-~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 142 VLVMTVEPGFGGQ-SFMHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASHGANIIVAGTSIFN 206 (227)
T ss_dssp EEEESSCTTCSSC-CCCGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHT
T ss_pred EEEeeeccCCCCc-ccchHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhC
Confidence 8888877766655 34555667899999876 78999999997 89999999999999999999997
No 40
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.61 E-value=9.1e-14 Score=128.89 Aligned_cols=199 Identities=14% Similarity=0.168 Sum_probs=134.7
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCCh------hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCC
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDL------STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTN 123 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~------~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~ 123 (311)
+.+.+......++..+|.=+=--.|+. -.-.++++.++++||++|.+- +||-+-+ | +
T Consensus 46 f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~~GA~~IsVl---td~~~f~-------------G-s 108 (272)
T 3tsm_A 46 FLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVL---TDTPSFQ-------------G-A 108 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCCHHHHHHHHHHTTCSEEEEE---CCSTTTC-------------C-C
T ss_pred HHHHHhhccccCCceEEEEeccCCCCCCccCCCCCHHHHHHHHHHCCCCEEEEe---ccccccC-------------C-C
Confidence 444444333356788887663333332 145799999999999999995 3432221 1 2
Q ss_pred HHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCC
Q 021527 124 FNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTP 201 (311)
Q Consensus 124 ~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp 201 (311)
++.++++|+.+++||+...|..+.+ .+..+.++|+|+|++. +++.++..++.+.+++.|++.+.-+
T Consensus 109 ----~~~L~~ir~~v~lPVl~Kdfi~d~~------qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvev-- 176 (272)
T 3tsm_A 109 ----PEFLTAARQACSLPALRKDFLFDPY------QVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEV-- 176 (272)
T ss_dssp ----HHHHHHHHHTSSSCEEEESCCCSTH------HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEE--
T ss_pred ----HHHHHHHHHhcCCCEEECCccCCHH------HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEe--
Confidence 2467788888999998776654333 3667899999997774 7877788999999999998766544
Q ss_pred CChHHHHHHHHHhCCceEEEEecCCccCCC-CCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 202 TTPTDRMKAIVEASEGFVYLVSSIGVTGAR-ASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 202 ~t~~eri~~i~~~a~gfiY~vs~~G~TG~~-~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
++. +.++... ..|+.|+. ++... ..+..++ +...++.+.. ++|++.++||+|+||++++.++|||||+|
T Consensus 177 h~~-eEl~~A~--~~ga~iIG----innr~l~t~~~dl-~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 177 HDE-AEMERAL--KLSSRLLG----VNNRNLRSFEVNL-AVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp CSH-HHHHHHT--TSCCSEEE----EECBCTTTCCBCT-HHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEE
T ss_pred CCH-HHHHHHH--hcCCCEEE----ECCCCCccCCCCh-HHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 343 4443332 34554442 22111 1122232 3344444443 68999999999999999999999999999
Q ss_pred hhHhhch
Q 021527 279 GSAMVKL 285 (311)
Q Consensus 279 GSaiv~~ 285 (311)
||+|++.
T Consensus 249 G~almr~ 255 (272)
T 3tsm_A 249 GESLMRQ 255 (272)
T ss_dssp CHHHHTS
T ss_pred cHHHcCC
Confidence 9999994
No 41
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.58 E-value=1.3e-13 Score=123.85 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=131.9
Q ss_pred HHHHHHHHcCCccEEEEEeCCCCCh--h--hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 52 ETFTRLKKQGKVALIPYITAGDPDL--S--TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 52 ~~f~~~~~~~~~~li~yi~~G~P~~--~--~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
+.+.++ +++...+++...+.|.. + ...+.++.+.++|+++++++ +|
T Consensus 9 ~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~---------~~------------------- 58 (234)
T 1yxy_A 9 KLMEQL--KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN---------SV------------------- 58 (234)
T ss_dssp HHHHHH--TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE---------SH-------------------
T ss_pred HHHHHH--hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC---------CH-------------------
Confidence 455555 45566677888888775 4 77999999999999999985 21
Q ss_pred HHHHHHhhccCCCcEEEEe---cCc-chhccCHHHHHHHHHHcCCcEEEecCC----Ch-hhHHHHHHHHHHcCCCeEEE
Q 021527 128 LSMLKEVVPQMSCPIALFT---YYN-PILKRGVDNFMSTVRDIGIRGLVVPDV----PL-EETESLQKEAMKNKIELVLF 198 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~---Y~n-~i~~~g~~~fi~~~~~aGadGviipDl----p~-ee~~~~~~~~~~~gi~~I~l 198 (311)
+.++.+|+.+++|++-.. |-+ .++.....+.++.+.++|+|.|.+.-. |. +...++.+.+++..-+....
T Consensus 59 -~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~ 137 (234)
T 1yxy_A 59 -RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLM 137 (234)
T ss_dssp -HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEE
T ss_pred -HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEE
Confidence 357778888899984221 100 111222356788999999999988422 11 23445666666652123444
Q ss_pred eCCCChHHHHHHHHHhCCceEEEE-ecCCccC-CCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEE
Q 021527 199 TTPTTPTDRMKAIVEASEGFVYLV-SSIGVTG-ARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 199 isp~t~~eri~~i~~~a~gfiY~v-s~~G~TG-~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGv 276 (311)
+.+.+.++ ..... ..|..|+. ...|++. .+....++ .+.++++++. ++||++.+||+|++++.++++.|||+|
T Consensus 138 ~~~~t~~e-a~~a~--~~Gad~i~~~v~g~~~~~~~~~~~~-~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~Gad~v 212 (234)
T 1yxy_A 138 ADISTFDE-GLVAH--QAGIDFVGTTLSGYTPYSRQEAGPD-VALIEALCKA-GIAVIAEGKIHSPEEAKKINDLGVAGI 212 (234)
T ss_dssp EECSSHHH-HHHHH--HTTCSEEECTTTTSSTTSCCSSSCC-HHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTCCSEE
T ss_pred EeCCCHHH-HHHHH--HcCCCEEeeeccccCCCCcCCCCCC-HHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCCCCEE
Confidence 56667655 33322 35666662 3344432 22112233 4678888887 899999999999999999999999999
Q ss_pred EEhhHhhc
Q 021527 277 IVGSAMVK 284 (311)
Q Consensus 277 IVGSaiv~ 284 (311)
+|||+|.+
T Consensus 213 ~vGsal~~ 220 (234)
T 1yxy_A 213 VVGGAITR 220 (234)
T ss_dssp EECHHHHC
T ss_pred EEchHHhC
Confidence 99999987
No 42
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.52 E-value=2.8e-13 Score=122.30 Aligned_cols=177 Identities=18% Similarity=0.235 Sum_probs=119.7
Q ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHH
Q 021527 79 TAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDN 158 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~ 158 (311)
..+.++.+.++|+|.|++-. .||. . .|.. .. +.++++++.+++|+++-+-.+ ..+
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~------~d~~---------~-~~~~-~~--~~i~~i~~~~~ipv~v~ggI~-----~~~- 88 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVD------LDAA---------F-GTGD-NR--ALIAEVAQAMDIKVELSGGIR-----DDD- 88 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEE------HHHH---------H-TSCC-CH--HHHHHHHHHCSSEEEEESSCC-----SHH-
T ss_pred HHHHHHHHHHcCCCEEEEec------Cchh---------h-cCCC-hH--HHHHHHHHhcCCcEEEECCcC-----CHH-
Confidence 47888999999999999941 2231 1 1211 11 578888888999999876443 223
Q ss_pred HHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC--------------ChHHHHHHHHHhCCceEEEEec
Q 021527 159 FMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT--------------TPTDRMKAIVEASEGFVYLVSS 224 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~--------------t~~eri~~i~~~a~gfiY~vs~ 224 (311)
.++.+.++|+|+|++.-........+.+.++.+|-..+..+++. ++.+.++.+.+..-+.+.+.+.
T Consensus 89 ~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~ 168 (244)
T 1vzw_A 89 TLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDI 168 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEecc
Confidence 48888899999999863222233345666667675555545543 5556666665654555555432
Q ss_pred CCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHc---CCcEEEEhhHhhc
Q 021527 225 IGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGW---GADGVIVGSAMVK 284 (311)
Q Consensus 225 ~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~---GADGvIVGSaiv~ 284 (311)
.. -|...+.+ .+.++++++.+++||++.+||++++++.++++. |||||+|||++.+
T Consensus 169 ~~-~~~~~g~~---~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 169 AK-DGTLQGPN---LELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYA 227 (244)
T ss_dssp --------CCC---HHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred Cc-ccccCCCC---HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHc
Confidence 21 11112222 467888988889999999999999999999999 9999999999997
No 43
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.52 E-value=6.6e-13 Score=121.25 Aligned_cols=181 Identities=18% Similarity=0.177 Sum_probs=116.8
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH---HHHHhhccCCCcEEEE
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS---MLKEVVPQMSCPIALF 145 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~---~i~~ir~~~~iPiilm 145 (311)
||......+.+.+.++.+.++|+++|++ +++-.++.. +-...+.+++++ .++++.++.++|+++.
T Consensus 35 It~~~~~~~~~~~~~~~al~~Gv~~vql----R~K~~~~~~--------~~~~l~~~~~~~~a~~l~~l~~~~~~~liIn 102 (243)
T 3o63_A 35 CTDARRERGDLAQFAEAALAGGVDIIQL----RDKGSPGEL--------RFGPLQARDELAACEILADAAHRYGALFAVN 102 (243)
T ss_dssp EECCCTTTCCHHHHHHHHHHTTCSEEEE----CCTTCHHHH--------HHCSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECCCcccchHHHHHHHHHHCCCCEEEE----ccCCCCccc--------cccCCCHHHHHHHHHHHHHHHHhhCCEEEEe
Confidence 3433333356889999999999999999 455322000 000011223333 3444455678999994
Q ss_pred ecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE-
Q 021527 146 TYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV- 222 (311)
Q Consensus 146 ~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v- 222 (311)
. .++.+.+.|+|||+++ |+|..+..++ .+.+.++.++..+.+| +.+..+ .|+.|+.
T Consensus 103 d------------~~~lA~~~gAdGVHLg~~dl~~~~~r~~------~~~~~~iG~S~ht~~E-a~~A~~--~GaDyI~v 161 (243)
T 3o63_A 103 D------------RADIARAAGADVLHLGQRDLPVNVARQI------LAPDTLIGRSTHDPDQ-VAAAAA--GDADYFCV 161 (243)
T ss_dssp S------------CHHHHHHHTCSEEEECTTSSCHHHHHHH------SCTTCEEEEEECSHHH-HHHHHH--SSCSEEEE
T ss_pred C------------HHHHHHHhCCCEEEecCCcCCHHHHHHh------hCCCCEEEEeCCCHHH-HHHHhh--CCCCEEEE
Confidence 2 3455778899999997 7876554432 3556677777777655 333323 5777773
Q ss_pred -ecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 223 -SSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 223 -s~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+.+ .|.++...++...+.++++++. .++|+++-+|| +++++.++.+.|||||.|||+|.+
T Consensus 162 gpvf-~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 162 GPCW-PTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp CCSS-CCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHT
T ss_pred cCcc-CCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhC
Confidence 223 2444433333335778888876 58999999999 689999999999999999999997
No 44
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.52 E-value=1.1e-14 Score=135.79 Aligned_cols=188 Identities=20% Similarity=0.243 Sum_probs=121.4
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc--CCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG--VPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG--~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
+..+|+++.+ .+.++.+.++|+++|++- +|+ ..++ ..|.+..+.++.++++++.++
T Consensus 21 ~~~~i~~~~~--------~~~a~~~~~~Ga~~i~~~e~v~~-------------~~~~-~~G~~~~~~~~~i~~i~~~~~ 78 (297)
T 2zbt_A 21 KGGVIMDVTT--------PEQAVIAEEAGAVAVMALERVPA-------------DIRA-QGGVARMSDPKIIKEIMAAVS 78 (297)
T ss_dssp TTEEEEEESS--------HHHHHHHHHHTCSEEEECSSCHH-------------HHHH-TTCCCCCCCHHHHHHHHTTCS
T ss_pred hCCeeeeech--------HHHHHHHHHCCCcEEEeccccch-------------HHHh-hcCCccCCCHHHHHHHHHhcC
Confidence 4568888865 789999999999999982 221 1122 235333334578889998899
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCC-ChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV-PLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl-p~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
+|+++..- .+..++++.+.++|+|+|..+.. ++.+ +.+.++++++...+++..+++++..+ . ...|+
T Consensus 79 ~Pvi~~~~------~~~~~~~~~~~~aGad~v~~~~~~~~~~---~~~~~~~~~~~i~l~~~v~~~~~~~~-a--~~~Ga 146 (297)
T 2zbt_A 79 IPVMAKVR------IGHFVEAMILEAIGVDFIDESEVLTPAD---EEHHIDKWKFKVPFVCGARNLGEALR-R--IAEGA 146 (297)
T ss_dssp SCEEEEEE------TTCHHHHHHHHHTTCSEEEEETTSCCSC---SSCCCCGGGCSSCEEEEESSHHHHHH-H--HHTTC
T ss_pred CCeEEEec------cCCHHHHHHHHHCCCCEEeeeCCCChHH---HHHHHHHhCCCceEEeecCCHHHHHH-H--HHcCC
Confidence 99886431 23368899999999999944321 1111 22233333333223323345555543 2 34677
Q ss_pred EEEEecCC--------------------------ccCCCC----CCCchHHHHHHHHhhcCCCcEE--EeeCCCCHHHHH
Q 021527 219 VYLVSSIG--------------------------VTGARA----SISGHVQTLLREIKESSTKPVA--VGFGISKPEHVQ 266 (311)
Q Consensus 219 iY~vs~~G--------------------------~TG~~~----~~~~~~~~~l~~vk~~~~~Pv~--vGfGIst~e~v~ 266 (311)
.|+.. .| .|+... ...+...+.++++++.+++|++ +.+||++++++.
T Consensus 147 d~I~v-~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~ 225 (297)
T 2zbt_A 147 AMIRT-KGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAA 225 (297)
T ss_dssp SEEEE-CCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHH
T ss_pred CEEEE-cccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHH
Confidence 67532 22 221110 0011124678889888889988 899999999999
Q ss_pred HHHHcCCcEEEEhhHhhc
Q 021527 267 QVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 267 ~v~~~GADGvIVGSaiv~ 284 (311)
++.++|||||+|||++++
T Consensus 226 ~~~~aGadgvvvGsai~~ 243 (297)
T 2zbt_A 226 LMMHLGMDGVFVGSGIFK 243 (297)
T ss_dssp HHHHTTCSEEEECGGGGG
T ss_pred HHHHcCCCEEEEchHHhC
Confidence 999999999999999997
No 45
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.50 E-value=3.3e-13 Score=121.54 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=119.8
Q ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHH
Q 021527 79 TAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDN 158 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~ 158 (311)
..+.++.+.++|+|.|++-. .||. ...+.+. +.++++++.+++|+++-+-.+ ..+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~------~d~~---------~~~~~~~----~~i~~i~~~~~ipv~v~ggi~-----~~~- 87 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVD------LDAA---------FGRGSNH----ELLAEVVGKLDVQVELSGGIR-----DDE- 87 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEE------HHHH---------TTSCCCH----HHHHHHHHHCSSEEEEESSCC-----SHH-
T ss_pred HHHHHHHHHHcCCCEEEEEc------Cccc---------ccCCChH----HHHHHHHHhcCCcEEEECCCC-----CHH-
Confidence 48899999999999999941 1221 1111121 578888888899999865443 223
Q ss_pred HHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC------------------ChHHHHHHHHHhCCceEE
Q 021527 159 FMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT------------------TPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~------------------t~~eri~~i~~~a~gfiY 220 (311)
.++.+.++|+|++++.-........+.+.++.+|-..+..+++. ++.+.++.+.+..-+.+.
T Consensus 88 ~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~ 167 (244)
T 2y88_A 88 SLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFV 167 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEE
Confidence 48888889999999863222233345555666664444444433 345666666555455555
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHc---CCcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGW---GADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~---GADGvIVGSaiv~ 284 (311)
+.++.. .|...+.+ .+.++++++.+++||++.+||++++++.++.+. |||||+|||++.+
T Consensus 168 ~~~~~~-~~~~~g~~---~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~ 230 (244)
T 2y88_A 168 VTDITK-DGTLGGPN---LDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYA 230 (244)
T ss_dssp EEETTT-TTTTSCCC---HHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred EEecCC-ccccCCCC---HHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHC
Confidence 544321 12212222 467888888889999999999999999999998 9999999999987
No 46
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.48 E-value=4.8e-12 Score=112.51 Aligned_cols=188 Identities=14% Similarity=0.165 Sum_probs=127.8
Q ss_pred ccEEE--EEeCCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC
Q 021527 63 VALIP--YITAGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM 138 (311)
Q Consensus 63 ~~li~--yi~~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~ 138 (311)
..||. -...|.|-. +.+.+.++.+.++|+++++++ + .+.++++|+.+
T Consensus 5 ~~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~---------~--------------------~~~i~~i~~~~ 55 (223)
T 1y0e_A 5 HGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN---------T--------------------KEDILAIKETV 55 (223)
T ss_dssp SEEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE---------S--------------------HHHHHHHHHHC
T ss_pred CCeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC---------C--------------------HHHHHHHHHhc
Confidence 34554 345665543 578999999999999999985 2 13677788888
Q ss_pred CCcEEEEe---cCc-chhccCHHHHHHHHHHcCCcEEEecCC----ChhhHHHHHHHHHHc--CCCeEEEeCCCChHHHH
Q 021527 139 SCPIALFT---YYN-PILKRGVDNFMSTVRDIGIRGLVVPDV----PLEETESLQKEAMKN--KIELVLFTTPTTPTDRM 208 (311)
Q Consensus 139 ~iPiilm~---Y~n-~i~~~g~~~fi~~~~~aGadGviipDl----p~ee~~~~~~~~~~~--gi~~I~lisp~t~~eri 208 (311)
++|++-.. +-+ .++.....+.++.+.++|+|.+++.-. |.+...++.+.+++. |+. ..+.+.++++ .
T Consensus 56 ~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~--v~~~~~t~~e-~ 132 (223)
T 1y0e_A 56 DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVE--IMADIATVEE-A 132 (223)
T ss_dssp CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSE--EEEECSSHHH-H
T ss_pred CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCce--EEecCCCHHH-H
Confidence 99984211 101 122122356788899999999987522 113345677777776 643 3457777655 3
Q ss_pred HHHHHhCCceEEEEe-cCCccCCCCCC--CchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 209 KAIVEASEGFVYLVS-SIGVTGARASI--SGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs-~~G~TG~~~~~--~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.. ..|..|+.. ..|.|+..... .....+.++++++.+++||++.+||++++++.++++.|||+|+|||+|.+
T Consensus 133 ~~~~--~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 133 KNAA--RLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp HHHH--HTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHH--HcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 3332 356666653 34556543322 22334678899888899999999999999999999999999999999987
No 47
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.46 E-value=5.1e-14 Score=127.71 Aligned_cols=191 Identities=18% Similarity=0.198 Sum_probs=69.0
Q ss_pred EEEEeCCCCCh-hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEE
Q 021527 66 IPYITAGDPDL-STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL 144 (311)
Q Consensus 66 i~yi~~G~P~~-~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiil 144 (311)
.+++--|.+.. ....+.++.++++|+|.|++- |.-.++. ..|.+. +.++++++.+++|+++
T Consensus 23 ~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~----d~~~~~~----------~~~~~~----~~i~~i~~~~~ipvi~ 84 (247)
T 3tdn_A 23 MVFTYSGKKNTGILLRDWVVEVEKRGAGEILLT----SIDRDGT----------KSGYDT----EMIRFVRPLTTLPIIA 84 (247)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEE----ETTTTTC----------SSCCCH----HHHHHHGGGCCSCEEE
T ss_pred EEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEE----ecCcccC----------CCcccH----HHHHHHHHhCCCCEEE
Confidence 34444444432 367899999999999999983 2222220 123443 5889999999999999
Q ss_pred EecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEE-eCCC-------------------Ch
Q 021527 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF-TTPT-------------------TP 204 (311)
Q Consensus 145 m~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~l-isp~-------------------t~ 204 (311)
.+..+. .+.++.+.+.|+|++++....+++...+.+.++.+|-+.+.+ ++.. ..
T Consensus 85 ~Ggi~~------~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~ 158 (247)
T 3tdn_A 85 SGGAGK------MEHFLEAFLRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILL 158 (247)
T ss_dssp ESCCCS------HHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHHC--------------------------------
T ss_pred eCCCCC------HHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCH
Confidence 876542 245777888999999998655544444555556665443321 1110 11
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+..+.+.+..-+.+++-+ ....|...+. ..++++++++.+++||++.+||++++|+.++++.|||||+|||++++
T Consensus 159 ~~~a~~~~~~G~~~i~~t~-~~~~g~~~g~---~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 159 RDWVVEVEKRGAGEILLTS-IDRDGTKSGY---DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCEEEEec-ccCCCCcCCC---CHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 1222222222223333221 1112222221 23678889888899999999999999999999999999999999986
No 48
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.45 E-value=3.3e-12 Score=112.94 Aligned_cols=172 Identities=16% Similarity=0.189 Sum_probs=118.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcE
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPI 142 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPi 142 (311)
..+++=|.. .|.+...+.++.+.++|+|+||+..+ || .. ++.++++++.+++|+
T Consensus 7 ~~i~~~i~~--~d~~~~~~~~~~~~~~G~~~i~l~~~--~~----~~------------------~~~i~~i~~~~~~~l 60 (212)
T 2v82_A 7 LPLIAILRG--ITPDEALAHVGAVIDAGFDAVEIPLN--SP----QW------------------EQSIPAIVDAYGDKA 60 (212)
T ss_dssp SCEEEECTT--CCHHHHHHHHHHHHHHTCCEEEEETT--ST----TH------------------HHHHHHHHHHHTTTS
T ss_pred CCEEEEEeC--CCHHHHHHHHHHHHHCCCCEEEEeCC--Ch----hH------------------HHHHHHHHHhCCCCe
Confidence 346665543 45688999999999999999999744 22 11 235556665566776
Q ss_pred EEE--ecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 143 ALF--TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 143 ilm--~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++- +..+ .+.++.+.++|+|+|+++.... ++.+.++++|.+.++- ..++.+- ....+ .|+.|
T Consensus 61 ~vg~g~~~~-------~~~i~~a~~~Gad~V~~~~~~~----~~~~~~~~~g~~~~~g--~~t~~e~-~~a~~--~G~d~ 124 (212)
T 2v82_A 61 LIGAGTVLK-------PEQVDALARMGCQLIVTPNIHS----EVIRRAVGYGMTVCPG--CATATEA-FTALE--AGAQA 124 (212)
T ss_dssp EEEEECCCS-------HHHHHHHHHTTCCEEECSSCCH----HHHHHHHHTTCEEECE--ECSHHHH-HHHHH--TTCSE
T ss_pred EEEeccccC-------HHHHHHHHHcCCCEEEeCCCCH----HHHHHHHHcCCCEEee--cCCHHHH-HHHHH--CCCCE
Confidence 662 2222 3578899999999999776432 3456778889775543 4555443 33223 46666
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCC--CcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESST--KPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~--~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+.- +. |+ ....+.++++++..+ +||++.+||+ ++++.++.+.|||||+|||+|.+.
T Consensus 125 v~v-~~-t~------~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 125 LKI-FP-SS------AFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp EEE-TT-HH------HHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred EEE-ec-CC------CCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 541 21 11 112367888888775 9999999998 899999999999999999999984
No 49
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.40 E-value=9.6e-12 Score=114.15 Aligned_cols=184 Identities=16% Similarity=0.218 Sum_probs=121.6
Q ss_pred CccEEEEEeCCCCCh-----hhHHHHHHHHHHCCCCEEEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCHHHHHHHHHHhh
Q 021527 62 KVALIPYITAGDPDL-----STTAEALKLLDSCGSDIIELGVPYSDPLA-DGPVIQAAATRSLARGTNFNAILSMLKEVV 135 (311)
Q Consensus 62 ~~~li~yi~~G~P~~-----~~~~e~~~~L~~~GaD~IElG~PfsDP~a-DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir 135 (311)
+..+|.=+=--.|+. ....++++.++++|+++|++- +|+-+ .| + ++.++.++
T Consensus 45 ~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvl---t~~~~f~G---------------~----~~~l~~i~ 102 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVL---TEPHRFGG---------------S----LLDLKRVR 102 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEE---CCCSSSCC---------------C----HHHHHHHH
T ss_pred CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEe---cchhhhcc---------------C----HHHHHHHH
Confidence 356666553333332 245899999999999999993 33322 23 1 24667777
Q ss_pred ccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHH
Q 021527 136 PQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVE 213 (311)
Q Consensus 136 ~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~ 213 (311)
+.+++||..-.+..+- . -+..+.++|+|+|++. +++ ++..++...++.+|++...-+. +.+ .+....+
T Consensus 103 ~~v~lPvl~kdfI~d~-----~-qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~--~~~-E~~~a~~ 172 (254)
T 1vc4_A 103 EAVDLPLLRKDFVVDP-----F-MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALVEVH--TER-ELEIALE 172 (254)
T ss_dssp HHCCSCEEEESCCCSH-----H-HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEEC--SHH-HHHHHHH
T ss_pred HhcCCCEEECCcCCCH-----H-HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEEEEC--CHH-HHHHHHH
Confidence 7899998775543322 2 3567899999999985 566 7788888888899988764443 333 3334434
Q ss_pred hCCceEEE-EecCCccCCCCCCCchHHHHHHHHhhcC-----CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 214 ASEGFVYL-VSSIGVTGARASISGHVQTLLREIKESS-----TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 214 ~a~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~-----~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
... .|+ +.....|.. ..++ +.+.++++.. ++|++..+||+|++|+.++.+ |+|||+|||+|++.
T Consensus 173 ~ga--d~IGvn~~~l~~~----~~dl-~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 173 AGA--EVLGINNRDLATL----HINL-ETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp HTC--SEEEEESBCTTTC----CBCT-THHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred cCC--CEEEEccccCcCC----CCCH-HHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 333 343 222222222 2222 2334444433 689999999999999999999 99999999999984
No 50
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.39 E-value=1e-12 Score=122.45 Aligned_cols=185 Identities=18% Similarity=0.233 Sum_probs=126.0
Q ss_pred HHHHHHH-cCCccEEEEEeCCCCChhhHHHHHHHHHH-CCCCEEEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 53 TFTRLKK-QGKVALIPYITAGDPDLSTTAEALKLLDS-CGSDIIELGVPYSDPLA-DGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 53 ~f~~~~~-~~~~~li~yi~~G~P~~~~~~e~~~~L~~-~GaD~IElG~PfsDP~a-DGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
.+.++++ .....+++-+.. ++.+.+.+.++.+.+ +|+|.||+. |+.|.. +| ....|.+.+.+.+
T Consensus 88 ~~~~~~~~~~~~p~~v~l~~--~~~~~~~~~a~~~~~~~g~d~iei~--~~~p~~~~g---------~~~~g~~~~~~~e 154 (311)
T 1ep3_A 88 KLPWLNENFPELPIIANVAG--SEEADYVAVCAKIGDAANVKAIELN--ISCPNVKHG---------GQAFGTDPEVAAA 154 (311)
T ss_dssp HHHHHHHHCTTSCEEEEECC--SSHHHHHHHHHHHTTSTTEEEEEEE--CCSEEGGGT---------TEEGGGCHHHHHH
T ss_pred HHHHHHhcCCCCcEEEEEcC--CCHHHHHHHHHHHhccCCCCEEEEe--CCCCCCCCc---------hhhhcCCHHHHHH
Confidence 3444554 324557666654 356889999999998 999999997 455543 11 1223446667788
Q ss_pred HHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHH
Q 021527 130 MLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMK 209 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~ 209 (311)
+++++++.+++|+++..+.+. ....++++.+.++|+|+|++.+.+ .|.. +.+.+...++
T Consensus 155 ii~~v~~~~~~pv~vk~~~~~---~~~~~~a~~l~~~G~d~i~v~~~~-------------~g~~----i~~~~~~~~~- 213 (311)
T 1ep3_A 155 LVKACKAVSKVPLYVKLSPNV---TDIVPIAKAVEAAGADGLTMINTL-------------MGVR----FDLKTRQPIL- 213 (311)
T ss_dssp HHHHHHHHCSSCEEEEECSCS---SCSHHHHHHHHHTTCSEEEECCCE-------------EECC----BCTTTCSBSS-
T ss_pred HHHHHHHhcCCCEEEEECCCh---HHHHHHHHHHHHcCCCEEEEeCCC-------------cccc----cCcccCCccc-
Confidence 999999888999999875442 245678999999999999998653 1111 1221110000
Q ss_pred HHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 210 AIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 210 ~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.. ..+ |.+|. ...+...++++++++.+++||++++||++++++.+++..|||+|.|||+++.
T Consensus 214 --~~-~~~--------g~~g~--~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 214 --AN-ITG--------GLSGP--AIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA 275 (311)
T ss_dssp --TT-SCE--------EEESG--GGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH
T ss_pred --cC-CCC--------cccCc--cchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 00 000 12232 1112234789999998899999999999999999999999999999999987
No 51
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=99.38 E-value=1.5e-11 Score=107.86 Aligned_cols=172 Identities=17% Similarity=0.261 Sum_probs=112.9
Q ss_pred HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhccCHHHH
Q 021527 81 EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~f 159 (311)
+.++.+.+.+.|++-+++-. |-.|| ++.++++|+. ...|+.+++..+ ..++
T Consensus 16 ~a~~~~~~~~~dlvl~D~~~--p~~~g--------------------~~~~~~l~~~~~~~~i~vi~~~~------~~~~ 67 (237)
T 3cwo_X 16 EAVEKYKELKPDIVTMDITM--PEMNG--------------------IDAIKEIMKIDPNAKIIVCSAMG------QQAM 67 (237)
T ss_dssp TTHHHHHHHCCSCEEEECCS--TTSSH--------------------HHHHHHHHHHSSSCCEEEECCSS------THHH
T ss_pred HHHHHHHhcCCCEEEEeCCC--CCCCH--------------------HHHHHHHHHhCCCCCEEEEECCC------CHHH
Confidence 44555666789988887533 44555 2344444432 223343433322 2567
Q ss_pred HHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEE-eCC-------------------CChHHHHHHHHHhCCceE
Q 021527 160 MSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF-TTP-------------------TTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 160 i~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~l-isp-------------------~t~~eri~~i~~~a~gfi 219 (311)
...+.+.|+++++..+.|++....+....+.++...+.+ +.. .+..++++++.....+++
T Consensus 68 ~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~v 147 (237)
T 3cwo_X 68 VIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEI 147 (237)
T ss_dssp HHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEE
T ss_pred HHHHHHCCHHheEeCCcccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeE
Confidence 888999999999987544443232333333444332221 111 244577777777778888
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+.+. +.+|...+.. .+.++++++..++|+++.+|+++++++.++++.||||+++||++..
T Consensus 148 li~~~-~~~g~~~g~~---~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 148 LLTSI-DRDGTKSGYD---TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp EEEET-TTTTCCSCCC---HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred EEEec-CCCCcccccc---HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 87654 4566655544 4679999988899999999999999999999999999999999965
No 52
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.36 E-value=1.5e-11 Score=115.11 Aligned_cols=180 Identities=18% Similarity=0.183 Sum_probs=123.3
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCC-EEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSD-IIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD-~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
..++.=+ +-.+.+.+.+.++.+.++|+| +||+.+ +.|..+| .++ .|.+.+.+.++++++|+.+++|
T Consensus 94 ~p~~~~i--~g~~~~~~~~~a~~~~~~g~d~~iein~--~~P~~~g-------~~~--~g~~~e~~~~iv~~vr~~~~~P 160 (311)
T 1jub_A 94 GPIFFSI--AGMSAAENIAMLKKIQESDFSGITELNL--SCPNVPG-------EPQ--LAYDFEATEKLLKEVFTFFTKP 160 (311)
T ss_dssp SCCEEEE--CCSSHHHHHHHHHHHHHSCCCSEEEEES--CCCCSSS-------CCC--GGGCHHHHHHHHHHHTTTCCSC
T ss_pred CCEEEEc--CCCCHHHHHHHHHHHHhcCCCeEEEEec--cCCCCCC-------ccc--ccCCHHHHHHHHHHHHHhcCCC
Confidence 3444433 245779999999999999999 999984 6776644 112 2456777889999999988999
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+++..+.|. ......++++.+.++|+|++++++.... |+ .+.+.+. +. ....+.++
T Consensus 161 v~vKi~~~~-~~~~~~~~a~~~~~~G~d~i~v~~~~~~------------g~----~i~~~~~--~~--~~~~~~~~--- 216 (311)
T 1jub_A 161 LGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGN------------GL----FIDPEAE--SV--VIKPKDGF--- 216 (311)
T ss_dssp EEEEECCCC-SHHHHHHHHHHHTTSCCCEEEECCCEEE------------EE----CEETTTT--EE--SCSGGGGE---
T ss_pred EEEEECCCC-CHHHHHHHHHHHHHcCCcEEEecCCCCc------------Cc----eeccCCC--Cc--ccccCCCC---
Confidence 999876552 2223456788889999999999875321 00 0111100 00 00000011
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.|.+|.. ..+...++++++++.+ ++||+..+||++++++.+++..|||+|.|||+++.
T Consensus 217 ---gG~sg~~--~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 217 ---GGIGGAY--IKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp ---EEEESGG--GHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred ---Ccccccc--ccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 1233421 2223357899999988 89999999999999999999999999999999996
No 53
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.36 E-value=5.5e-11 Score=107.82 Aligned_cols=202 Identities=12% Similarity=0.128 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
|+.+.+.+.+ ..+++-+..-+| ++..+++++|.++|++.||+ ++++| +
T Consensus 24 m~~~~~~l~~------~~vv~Vir~~~~--~~a~~~a~al~~gGi~~iEv--t~~t~--~-------------------- 71 (232)
T 4e38_A 24 MSTINNQLKA------LKVIPVIAIDNA--EDIIPLGKVLAENGLPAAEI--TFRSD--A-------------------- 71 (232)
T ss_dssp HHHHHHHHHH------HCEEEEECCSSG--GGHHHHHHHHHHTTCCEEEE--ETTST--T--------------------
T ss_pred HHHHHHHHHh------CCEEEEEEcCCH--HHHHHHHHHHHHCCCCEEEE--eCCCC--C--------------------
Confidence 6655555553 348888876666 78999999999999999999 55555 1
Q ss_pred HHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHH
Q 021527 127 ILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTD 206 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~e 206 (311)
.++.++++++++.-.++.-+ ++.. .+-++.+.++|++.++.|.+.. ++.+.|+++|+..++-+. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaG---TVlt---~~~a~~Ai~AGA~fIvsP~~~~----~vi~~~~~~gi~~ipGv~--TptE 139 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAG---TILN---GEQALAAKEAGATFVVSPGFNP----NTVRACQEIGIDIVPGVN--NPST 139 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEE---CCCS---HHHHHHHHHHTCSEEECSSCCH----HHHHHHHHHTCEEECEEC--SHHH
T ss_pred HHHHHHHHHHhCCCCEEeEC---CcCC---HHHHHHHHHcCCCEEEeCCCCH----HHHHHHHHcCCCEEcCCC--CHHH
Confidence 13577777776533333322 2332 5678999999999999997643 356678889998887765 5555
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
-.+. ...|+.|+-. +. ++ .. .-.++++.++... ++|++.-+||+ ++++.+.+++|++++++||.+++.
T Consensus 140 i~~A---~~~Gad~vK~-FP-a~---~~--gG~~~lkal~~p~p~ip~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~~~ 208 (232)
T 4e38_A 140 VEAA---LEMGLTTLKF-FP-AE---AS--GGISMVKSLVGPYGDIRLMPTGGIT-PSNIDNYLAIPQVLACGGTWMVDK 208 (232)
T ss_dssp HHHH---HHTTCCEEEE-CS-TT---TT--THHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHTSTTBCCEEECGGGCH
T ss_pred HHHH---HHcCCCEEEE-Cc-Cc---cc--cCHHHHHHHHHHhcCCCeeeEcCCC-HHHHHHHHHCCCeEEEECchhcCh
Confidence 4433 3356666531 11 11 01 1237899999875 79999999996 899999999999999999999864
Q ss_pred hh-hcCCchhHHHHHHHHHHHHH
Q 021527 286 LG-EAQSPEEGLKELEKFAKSLK 307 (311)
Q Consensus 286 ~~-~~~~~~~~~~~~~~~~~~l~ 307 (311)
-. +.++ .+++.+.++++.
T Consensus 209 ~~i~~~~----~~~i~~~a~~~~ 227 (232)
T 4e38_A 209 KLVTNGE----WDEIARLTREIV 227 (232)
T ss_dssp HHHHTTC----HHHHHHHHHHHH
T ss_pred HHhhcCC----HHHHHHHHHHHH
Confidence 21 2223 344555555443
No 54
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.35 E-value=2.1e-11 Score=109.57 Aligned_cols=186 Identities=13% Similarity=0.052 Sum_probs=125.1
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEec
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTY 147 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y 147 (311)
+-+.+|++++..+.++.+. ..++++++|.|+ + +..| .+.++++|+.. +.++.+..-
T Consensus 10 vAlD~~~~~~a~~~~~~~~-~~~~~ikvg~~l--------f--------~~~G------~~~v~~l~~~~p~~~iflDlK 66 (221)
T 3exr_A 10 VALDHSNLKGAITAAVSVG-NEVDVIEAGTVC--------L--------LQVG------SELVEVLRSLFPDKIIVADTK 66 (221)
T ss_dssp EEECCSSHHHHHHHHHHHG-GGCSEEEECHHH--------H--------HHHC------THHHHHHHHHCTTSEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHhhC-CCceEEEECHHH--------H--------HhcC------HHHHHHHHHhCCCCcEEEEEE
Confidence 5667899999999999875 459999998433 2 2234 34677887754 667777653
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcC---CCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNK---IELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~g---i~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+..+ .+.+.+.+.++|+|.+.++-..-.+ ....++.++++| ......+.+.++.++++.+.+ .++.|++-
T Consensus 67 l~Di----p~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~--~~~~~~v~ 140 (221)
T 3exr_A 67 CADA----GGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLD--AGISQAIY 140 (221)
T ss_dssp ECSC----HHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHH--TTCCEEEE
T ss_pred eecc----HHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHc--CCHHHHHH
Confidence 3322 3445667899999999998654333 667788888877 322333445557788766644 35556554
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
..+..+...+...+. +.++.+|+.. +.++.|.+||+ +++++++.++|||.+||||+|.+.
T Consensus 141 ~~a~~~~~~Gvv~s~-~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~aGad~~VvG~~I~~a 202 (221)
T 3exr_A 141 HQSRDALLAGETWGE-KDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGVDVFTFIAGRGITEA 202 (221)
T ss_dssp ECCHHHHHHTCCCCH-HHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTCCCSEEEECHHHHTS
T ss_pred HHHHhcCCCccccCH-HHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHCCCCEEEECchhhCC
Confidence 444322222222222 3466777654 67889999996 799999999999999999999973
No 55
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.35 E-value=7.1e-11 Score=105.09 Aligned_cols=174 Identities=16% Similarity=0.210 Sum_probs=105.1
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEEE
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIAL 144 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPiil 144 (311)
..|++.....+.+ +.++.+.++|+|++++..+. .+.++..++++.+++.. ..++++
T Consensus 20 ~~It~~~~~~~~l-~~~~~~~~~G~~~v~lr~~~---------------------~~~~~~~~~~~~l~~~~~~~~~l~v 77 (221)
T 1yad_A 20 HAITDDSKPVEEL-ARIIITIQNEVDFIHIRERS---------------------KSAADILKLLDLIFEGGIDKRKLVM 77 (221)
T ss_dssp EEECCSCSCHHHH-HHHHHHHGGGCSEEEECCTT---------------------SCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEEECCCcCcchH-HHHHHHHHCCCCEEEEccCC---------------------CCHHHHHHHHHHHHHhcCcCCeEEE
Confidence 3456666666655 44788889999999996332 22334455666666531 113443
Q ss_pred EecCcchhccCHHHHHHHHHHcCCcEEEecC--CChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPD--VPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 145 m~Y~n~i~~~g~~~fi~~~~~aGadGviipD--lp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
| +.++.+.++|+|+|.++. .+.++.. +. .. |+ +..++..+.++ ..+..+..-.++.+.
T Consensus 78 ----~--------~~~~~a~~~gad~v~l~~~~~~~~~~~---~~-~~-~~--~ig~sv~t~~~-~~~a~~~gaD~i~~~ 137 (221)
T 1yad_A 78 ----N--------GRVDIALFSTIHRVQLPSGSFSPKQIR---AR-FP-HL--HIGRSVHSLEE-AVQAEKEDADYVLFG 137 (221)
T ss_dssp ----E--------SCHHHHHTTTCCEEEECTTSCCHHHHH---HH-CT-TC--EEEEEECSHHH-HHHHHHTTCSEEEEE
T ss_pred ----e--------ChHHHHHHcCCCEEEeCCCccCHHHHH---HH-CC-CC--EEEEEcCCHHH-HHHHHhCCCCEEEEC
Confidence 2 245778899999999974 3333332 22 12 43 33445455544 333333333343333
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+..+ |....+.++...+.++++++..++|+++.+|| +++++.++.+.|||||+|||++.+
T Consensus 138 ~~f~-~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 138 HVFE-TDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp CCC-----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHT
T ss_pred Cccc-cCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhC
Confidence 3322 22221212233477888887779999999999 699999999999999999999987
No 56
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.34 E-value=1.9e-11 Score=117.51 Aligned_cols=186 Identities=15% Similarity=0.145 Sum_probs=123.0
Q ss_pred CEEEEcCC-CCCCCCChHHHHHHHHHHHHcCC-------CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHH
Q 021527 92 DIIELGVP-YSDPLADGPVIQAAATRSLARGT-------NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTV 163 (311)
Q Consensus 92 D~IElG~P-fsDP~aDGp~Iq~a~~~Al~~G~-------~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~ 163 (311)
+.+++.+| ++.|+..+...+-|...|.+.|. +.++.++.++++++..+.|+.+....|+ .++++.+
T Consensus 40 ~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~------~e~a~~l 113 (361)
T 3khj_A 40 KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVNE------IERAKLL 113 (361)
T ss_dssp SSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHHTTCCCCEEEECTTC------HHHHHHH
T ss_pred cccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCCCHHHHHHHHHHHHhccCceEEEEeCCCH------HHHHHHH
Confidence 46788888 68888877666666656666775 7888899999999888899888876553 6789999
Q ss_pred HHcCCcEEEecCCCh---hhHHHHHHHHHH-cCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecC-C-ccCCC--CCCC
Q 021527 164 RDIGIRGLVVPDVPL---EETESLQKEAMK-NKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSI-G-VTGAR--ASIS 235 (311)
Q Consensus 164 ~~aGadGviipDlp~---ee~~~~~~~~~~-~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~-G-~TG~~--~~~~ 235 (311)
.++|+|.+++ |... +...+..+.+++ +++.++.- ...+ .+..+.+.+..-.+|.+ ... | ..+.+ .+..
T Consensus 114 ~eaGad~I~l-d~a~G~~~~~~~~i~~i~~~~~~~Vivg-~v~t-~e~A~~l~~aGaD~I~V-G~~~Gs~~~tr~~~g~g 189 (361)
T 3khj_A 114 VEAGVDVIVL-DSAHGHSLNIIRTLKEIKSKMNIDVIVG-NVVT-EEATKELIENGADGIKV-GIGPGSICTTRIVAGVG 189 (361)
T ss_dssp HHTTCSEEEE-CCSCCSBHHHHHHHHHHHHHCCCEEEEE-EECS-HHHHHHHHHTTCSEEEE-CSSCCTTCCHHHHTCBC
T ss_pred HHcCcCeEEE-eCCCCCcHHHHHHHHHHHHhcCCcEEEc-cCCC-HHHHHHHHHcCcCEEEE-ecCCCcCCCcccccCCC
Confidence 9999998765 2222 233334444444 46655431 2234 45555555554455554 111 1 00000 0111
Q ss_pred chHHHHHHHHh---hcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 236 GHVQTLLREIK---ESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 236 ~~~~~~l~~vk---~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
....+.+.+++ +.+++||++.+||++++++.+++.+|||+|.+||+|...-+
T Consensus 190 ~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 190 VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 244 (361)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTT
T ss_pred CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCc
Confidence 11223455553 33589999999999999999999999999999999998764
No 57
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.34 E-value=5.3e-12 Score=118.41 Aligned_cols=191 Identities=16% Similarity=0.161 Sum_probs=118.4
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc-CCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG-VPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG-~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
|..+|..+ +| .++++..+++|+|.|-+= ....|..+-| |+.-..-++.++++++.+++
T Consensus 21 kggv~~d~---~~-----~e~A~~ye~~GA~~lsvLe~~~~Di~~~~-------------g~~R~~~~~~i~~i~~~v~i 79 (297)
T 4adt_A 21 KGGVIMDV---KN-----VEQAKIAEKAGAIGVMILENIPSELRNTD-------------GVARSVDPLKIEEIRKCISI 79 (297)
T ss_dssp TTCEEEEE---SS-----HHHHHHHHHHTCSEEEECCCCC-----CC-------------CCCCCCCHHHHHHHHTTCCS
T ss_pred cCCcccCC---Cc-----HHHHHHHHHcCCCEEEEecCCCCcchhcC-------------CcccCCCHHHHHHHHHhcCC
Confidence 44577777 34 488999999999998762 1112322222 21001124699999999999
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCC-ChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV-PLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl-p~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
|++... +.+..++++.+.++|||.|-.++. ++.+ +.+.+++++....+++..++.++..+.+ +....+|
T Consensus 80 Pvl~k~------~i~~ide~qil~aaGAD~Id~s~~~~~~~---li~~i~~~~~g~~vvv~v~~~~Ea~~a~-~~Gad~I 149 (297)
T 4adt_A 80 NVLAKV------RIGHFVEAQILEELKVDMLDESEVLTMAD---EYNHINKHKFKTPFVCGCTNLGEALRRI-SEGASMI 149 (297)
T ss_dssp EEEEEE------ETTCHHHHHHHHHTTCSEEEEETTSCCSC---SSCCCCGGGCSSCEEEEESSHHHHHHHH-HHTCSEE
T ss_pred CEEEec------cCCcHHHHHHHHHcCCCEEEcCCCCCHHH---HHHHHHhcCCCCeEEEEeCCHHHHHHHH-hCCCCEE
Confidence 998642 123356788888999999844432 3222 3344445333333344555655544333 3233333
Q ss_pred EEEecCCccCC-----------------------CC------CCCchHHHHHHHHhhcCCCcEE--EeeCCCCHHHHHHH
Q 021527 220 YLVSSIGVTGA-----------------------RA------SISGHVQTLLREIKESSTKPVA--VGFGISKPEHVQQV 268 (311)
Q Consensus 220 Y~vs~~G~TG~-----------------------~~------~~~~~~~~~l~~vk~~~~~Pv~--vGfGIst~e~v~~v 268 (311)
. +...+.||. +. .... ..++++++++..++|++ +.+||++++++.++
T Consensus 150 ~-v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~-~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~ 227 (297)
T 4adt_A 150 R-TKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRA-PIDLILLTRKLKRLPVVNFAAGGIATPADAAMC 227 (297)
T ss_dssp E-ECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTC-CHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHH
T ss_pred E-ECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCC-CHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHH
Confidence 3 223344662 00 0111 24678888888888986 89999999999999
Q ss_pred HHcCCcEEEEhhHhhch
Q 021527 269 AGWGADGVIVGSAMVKL 285 (311)
Q Consensus 269 ~~~GADGvIVGSaiv~~ 285 (311)
.++|||||+|||+|++.
T Consensus 228 ~~~GAdgVlVGsai~~a 244 (297)
T 4adt_A 228 MQLGMDGVFVGSGIFES 244 (297)
T ss_dssp HHTTCSCEEESHHHHTS
T ss_pred HHcCCCEEEEhHHHHcC
Confidence 99999999999999983
No 58
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.33 E-value=1.1e-10 Score=110.25 Aligned_cols=153 Identities=13% Similarity=0.134 Sum_probs=105.9
Q ss_pred HHHHHHHHHhhccCCCcEEEEecCcch-hccCHHHHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCC
Q 021527 125 NAILSMLKEVVPQMSCPIALFTYYNPI-LKRGVDNFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPT 202 (311)
Q Consensus 125 ~~~~~~i~~ir~~~~iPiilm~Y~n~i-~~~g~~~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~ 202 (311)
+++.+.++++++.++.|+.+..+.|+. .....+++++.+.+.|+|+|.++ +.| .++.+.++++|+..+..+ +
T Consensus 53 ~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p----~~~~~~l~~~gi~vi~~v--~ 126 (328)
T 2gjl_A 53 EALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP----GEHIAEFRRHGVKVIHKC--T 126 (328)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCC----HHHHHHHHHTTCEEEEEE--S
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCc----HHHHHHHHHcCCCEEeeC--C
Confidence 455667888887777888777666521 12345789999999999999886 455 345667778888766544 4
Q ss_pred ChHHHHHHHHHhCCceEEEEec-CC-ccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 203 TPTDRMKAIVEASEGFVYLVSS-IG-VTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 203 t~~eri~~i~~~a~gfiY~vs~-~G-~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
+.++..+......++++ +... .| .+|.. .....+++.++++.+++||++++||++++++.+++..|||||.|||
T Consensus 127 t~~~a~~~~~~GaD~i~-v~g~~~GG~~G~~---~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs 202 (328)
T 2gjl_A 127 AVRHALKAERLGVDAVS-IDGFECAGHPGED---DIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGT 202 (328)
T ss_dssp SHHHHHHHHHTTCSEEE-EECTTCSBCCCSS---CCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred CHHHHHHHHHcCCCEEE-EECCCCCcCCCCc---cccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 55444333222233333 3221 11 22321 1234578999998889999999999999999999999999999999
Q ss_pred Hhhchhh
Q 021527 281 AMVKLLG 287 (311)
Q Consensus 281 aiv~~~~ 287 (311)
+|+...+
T Consensus 203 ~~~~~~e 209 (328)
T 2gjl_A 203 RFLATRE 209 (328)
T ss_dssp HHHTSSS
T ss_pred HHHcCcc
Confidence 9998765
No 59
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.32 E-value=1.4e-10 Score=109.85 Aligned_cols=183 Identities=16% Similarity=0.195 Sum_probs=123.1
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCC-CEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEE
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGS-DIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALF 145 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~Ga-D~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm 145 (311)
|++.++-+.. +..+.+.++.++|. ..+..+ + .+.+.+.+.++++++.++.|+.+.
T Consensus 14 Pii~apM~g~-s~~~la~av~~aG~lG~i~~~--~---------------------~~~~~~~~~i~~i~~~~~~p~gvn 69 (332)
T 2z6i_A 14 PIFQGGMAWV-ADGDLAGAVSKAGGLGIIGGG--N---------------------APKEVVKANIDKIKSLTDKPFGVN 69 (332)
T ss_dssp SEEECCCTTT-CCHHHHHHHHHHTSBEEEECT--T---------------------CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CEEeCCCCCC-CcHHHHHHHHhCCCcEEeCCC--C---------------------CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3555555543 33567777777775 677654 1 233444567777777677888776
Q ss_pred ecC-cchhccCHHHHHHHHHHcCCcEEEecC-CChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 146 TYY-NPILKRGVDNFMSTVRDIGIRGLVVPD-VPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 146 ~Y~-n~i~~~g~~~fi~~~~~aGadGviipD-lp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
.+. |+ ..++.++.+.++|+|+|.++. .|.+ +.+.+++.|+.++.-+ ++ .+..+.+.+..-.++.+..
T Consensus 70 l~~~~~----~~~~~~~~a~~~g~d~V~~~~g~p~~----~i~~l~~~g~~v~~~v--~~-~~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 70 IMLLSP----FVEDIVDLVIEEGVKVVTTGAGNPSK----YMERFHEAGIIVIPVV--PS-VALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp ECTTST----THHHHHHHHHHTTCSEEEECSSCGGG----THHHHHHTTCEEEEEE--SS-HHHHHHHHHTTCSCEEEEC
T ss_pred ecCCCC----CHHHHHHHHHHCCCCEEEECCCChHH----HHHHHHHcCCeEEEEe--CC-HHHHHHHHHcCCCEEEEEC
Confidence 544 43 346788999999999999974 4432 4455566787766544 33 3445555554445555543
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
. .+|...+. ....++++++++.+++||++.+||++++++.+++..|||||.|||+|+...+
T Consensus 139 ~--~~GG~~g~-~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e 199 (332)
T 2z6i_A 139 M--EAGGHIGK-LTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKE 199 (332)
T ss_dssp T--TSSEECCS-SCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTT
T ss_pred C--CCCCCCCC-ccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCcc
Confidence 2 12322221 2234789999988899999999999999999999999999999999998654
No 60
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.30 E-value=1.5e-11 Score=115.27 Aligned_cols=189 Identities=23% Similarity=0.273 Sum_probs=116.8
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEE-EEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDII-ELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~I-ElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
+..+|..+ +| .+.++.+.++|+|.| ++. |. |.+.. ...|......++.++++++.+++
T Consensus 21 ~~g~i~~~---~~-----~~~a~~~~~~Ga~~I~~l~-p~-------~~~~~-----~~~G~~~~~~~~~i~~I~~~~~i 79 (305)
T 2nv1_A 21 KGGVIMDV---IN-----AEQAKIAEEAGAVAVMALE-RV-------PADIR-----AAGGVARMADPTIVEEVMNAVSI 79 (305)
T ss_dssp TTCEEEEE---SS-----HHHHHHHHHTTCSEEEECC-C-------------------CCCCCCCCCHHHHHHHHHHCSS
T ss_pred cCCeeecC---CH-----HHHHHHHHHcCCCEEEEcC-CC-------cchhh-----hccCcccCCCHHHHHHHHHhCCC
Confidence 34465544 56 689999999999999 564 32 22211 12332111124577788878899
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecC-CChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPD-VPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipD-lp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
|+++-... |..++++.+.++|+|+|+..+ +++++..++.+ ++++|+..+ +...+..+..+.+ + .|..
T Consensus 80 Pv~~k~r~------g~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~-~~~~g~~v~--~~~~~~~e~~~a~-~--~Gad 147 (305)
T 2nv1_A 80 PVMAKARI------GHIVEARVLEAMGVDYIDESEVLTPADEEFHLN-KNEYTVPFV--CGCRDLGEATRRI-A--EGAS 147 (305)
T ss_dssp CEEEEECT------TCHHHHHHHHHHTCSEEEECTTSCCSCSSCCCC-GGGCSSCEE--EEESSHHHHHHHH-H--TTCS
T ss_pred CEEecccc------cchHHHHHHHHCCCCEEEEeccCCHHHHHHHHH-HhccCCcEE--EEeCCHHHHHHHH-H--CCCC
Confidence 98763221 224678888889999998543 44444333333 345676544 3445655655443 3 3433
Q ss_pred EEEecCCccCC------------------------CCCC------CchHHHHHHHHhhcCCCcEE--EeeCCCCHHHHHH
Q 021527 220 YLVSSIGVTGA------------------------RASI------SGHVQTLLREIKESSTKPVA--VGFGISKPEHVQQ 267 (311)
Q Consensus 220 Y~vs~~G~TG~------------------------~~~~------~~~~~~~l~~vk~~~~~Pv~--vGfGIst~e~v~~ 267 (311)
|+.. .|-+|. +... .+...++++++++..++||+ +.+||++++++.+
T Consensus 148 ~V~~-~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~ 226 (305)
T 2nv1_A 148 MLRT-KGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAAL 226 (305)
T ss_dssp EEEE-CCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHH
T ss_pred EEEe-ccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHH
Confidence 4422 121110 0000 11124678888887889998 9999999999999
Q ss_pred HHHcCCcEEEEhhHhhc
Q 021527 268 VAGWGADGVIVGSAMVK 284 (311)
Q Consensus 268 v~~~GADGvIVGSaiv~ 284 (311)
+.+.|||||+|||++++
T Consensus 227 ~~~~GadgV~vGsai~~ 243 (305)
T 2nv1_A 227 MMQLGADGVFVGSGIFK 243 (305)
T ss_dssp HHHTTCSCEEECGGGGG
T ss_pred HHHcCCCEEEEcHHHHc
Confidence 99999999999999997
No 61
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.30 E-value=1.2e-10 Score=103.68 Aligned_cols=170 Identities=19% Similarity=0.139 Sum_probs=118.2
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.+++-+..- +.++..+.++++.++|+++||+. +++| +..+.++++++ .++.+.
T Consensus 14 ~ii~vi~~~--~~~~~~~~~~~l~~gGv~~iel~--~k~~----------------------~~~~~i~~~~~-~~~~~g 66 (207)
T 2yw3_A 14 RLLPLLTVR--GGEDLLGLARVLEEEGVGALEIT--LRTE----------------------KGLEALKALRK-SGLLLG 66 (207)
T ss_dssp CEEEEECCC--SCCCHHHHHHHHHHTTCCEEEEE--CSST----------------------HHHHHHHHHTT-SSCEEE
T ss_pred CEEEEEeCC--CHHHHHHHHHHHHHcCCCEEEEe--CCCh----------------------HHHHHHHHHhC-CCCEEE
Confidence 466655443 44678999999999999999997 3332 11346666666 444443
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
.-+ +. ..+.++.+.++|+|+++.|... .++.+.++++|+..++-+ .|+.+. .+.. ..|..|+.-
T Consensus 67 ag~----vl---~~d~~~~A~~~GAd~v~~~~~d----~~v~~~~~~~g~~~i~G~--~t~~e~-~~A~--~~Gad~v~~ 130 (207)
T 2yw3_A 67 AGT----VR---SPKEAEAALEAGAAFLVSPGLL----EEVAALAQARGVPYLPGV--LTPTEV-ERAL--ALGLSALKF 130 (207)
T ss_dssp EES----CC---SHHHHHHHHHHTCSEEEESSCC----HHHHHHHHHHTCCEEEEE--CSHHHH-HHHH--HTTCCEEEE
T ss_pred eCe----Ee---eHHHHHHHHHcCCCEEEcCCCC----HHHHHHHHHhCCCEEecC--CCHHHH-HHHH--HCCCCEEEE
Confidence 322 22 2477899999999999998654 235566778898877764 344443 3332 347777632
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+. . . ...-.++++.+++.. ++|++.-+||+ ++|+.++++.||||++|||++++
T Consensus 131 -fp---a--~-~~gG~~~lk~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 131 -FP---A--E-PFQGVRVLRAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp -TT---T--T-TTTHHHHHHHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred -ec---C--c-cccCHHHHHHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 22 1 0 110236788998877 89999999997 79999999999999999999998
No 62
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.29 E-value=1.2e-10 Score=103.54 Aligned_cols=185 Identities=14% Similarity=0.095 Sum_probs=119.9
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEe
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFT 146 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~ 146 (311)
.+.+..+++++..+.++.+.+ .++++++|. |-+ +..| .+.++.+|+.. +.++++..
T Consensus 7 ilalD~~~~~~~~~~~~~~~~-~v~~~kv~~--------~~f--------~~~G------~~~i~~l~~~~p~~~v~lD~ 63 (216)
T 1q6o_A 7 QVALDNQTMDSAYETTRLIAE-EVDIIEVGT--------ILC--------VGEG------VRAVRDLKALYPHKIVLADA 63 (216)
T ss_dssp EEEECCSSHHHHHHHHHHHGG-GCSEEEECH--------HHH--------HHHC------THHHHHHHHHCTTSEEEEEE
T ss_pred EEEECCCCHHHHHHHHHHhcc-cCCEEEECH--------HHH--------HHhC------HHHHHHHHHhCCCCeEEEEE
Confidence 356677899999999988864 589999983 322 1223 34677777653 46666655
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEE-EeCCCChHHHHHHHHHhCCceEEEEec
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVL-FTTPTTPTDRMKAIVEASEGFVYLVSS 224 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~-lisp~t~~eri~~i~~~a~gfiY~vs~ 224 (311)
.... ..+.+++.+.++|+|.+.++-..-.+ ..++.+.++++|..... +++.-+ ..+.+.+... +..|++..
T Consensus 64 kl~d----ip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~t-~~~~~~l~~~--~~~~~vl~ 136 (216)
T 1q6o_A 64 KIAD----AGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWT-WEQAQQWRDA--GIGQVVYH 136 (216)
T ss_dssp EECS----CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCC-HHHHHHHHHT--TCCEEEEE
T ss_pred Eecc----cHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCCC-hhhHHHHHhc--CcHHHHHH
Confidence 4332 24567778899999999997544344 66788889999987533 341322 2333444332 45555431
Q ss_pred CCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 225 IGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 225 ~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+......+... ..+.++++|+.. +.|+++.+||+ ++++.++.++|||++||||++.+
T Consensus 137 ~a~~~~~~G~~g-~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 137 RSRDAQAAGVAW-GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp CCHHHHHTTCCC-CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHT
T ss_pred HHHHHHhcCCCC-CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcC
Confidence 111100011111 124567777654 67899999998 89999999999999999999997
No 63
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.28 E-value=1.4e-10 Score=101.86 Aligned_cols=188 Identities=19% Similarity=0.218 Sum_probs=121.0
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
.+++-+..- +.+...+.++.+.++|+|+||+.+.. | ++ .+.++++|+.+ +.+
T Consensus 11 ~~i~~~~~~--~~~~~~~~~~~~~~~G~~~iev~~~~--~--~~--------------------~~~i~~ir~~~~~~~~ 64 (205)
T 1wa3_A 11 KIVAVLRAN--SVEEAKEKALAVFEGGVHLIEITFTV--P--DA--------------------DTVIKELSFLKEKGAI 64 (205)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHTTCCEEEEETTS--T--TH--------------------HHHHHHTHHHHHTTCE
T ss_pred CEEEEEecC--CHHHHHHHHHHHHHCCCCEEEEeCCC--h--hH--------------------HHHHHHHHHHCCCCcE
Confidence 466666544 45789999999999999999996432 2 11 23556666543 345
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-+-.| .+ -++.+.++|+|.++-|.++ .++.+.++++|+..+.-+ .|+.+ +.+..+ .|+.++
T Consensus 65 ig~~~v~~------~~-~~~~a~~~Gad~iv~~~~~----~~~~~~~~~~g~~vi~g~--~t~~e-~~~a~~--~Gad~v 128 (205)
T 1wa3_A 65 IGAGTVTS------VE-QCRKAVESGAEFIVSPHLD----EEISQFCKEKGVFYMPGV--MTPTE-LVKAMK--LGHTIL 128 (205)
T ss_dssp EEEESCCS------HH-HHHHHHHHTCSEEECSSCC----HHHHHHHHHHTCEEECEE--CSHHH-HHHHHH--TTCCEE
T ss_pred EEecccCC------HH-HHHHHHHcCCCEEEcCCCC----HHHHHHHHHcCCcEECCc--CCHHH-HHHHHH--cCCCEE
Confidence 55422222 23 3677888999999556554 246677888998877644 24433 333333 444443
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHH
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELE 300 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~ 300 (311)
... . . ...-.+.++++++.. ++|+++.+||+ ++++.++++.|||+|+|||++.+ . ++.+..+.++
T Consensus 129 k~~-~---~----~~~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~--~---d~~~~~~~~~ 194 (205)
T 1wa3_A 129 KLF-P---G----EVVGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK--G---TPDEVREKAK 194 (205)
T ss_dssp EET-T---H----HHHHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC--S---CHHHHHHHHH
T ss_pred EEc-C---c----cccCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC--C---CHHHHHHHHH
Confidence 211 0 0 011236788888877 89999999997 79999999999999999999998 2 3333334445
Q ss_pred HHHHHHH
Q 021527 301 KFAKSLK 307 (311)
Q Consensus 301 ~~~~~l~ 307 (311)
+|.+.++
T Consensus 195 ~~~~~~~ 201 (205)
T 1wa3_A 195 AFVEKIR 201 (205)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 64
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.27 E-value=1.3e-10 Score=111.88 Aligned_cols=187 Identities=18% Similarity=0.185 Sum_probs=121.3
Q ss_pred CEEEEcCC-CCCCCCChHHHHHHHHHHHHcC-------CCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHH
Q 021527 92 DIIELGVP-YSDPLADGPVIQAAATRSLARG-------TNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTV 163 (311)
Q Consensus 92 D~IElG~P-fsDP~aDGp~Iq~a~~~Al~~G-------~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~ 163 (311)
+.+++.+| ++.|+......+-|...|.+.| .+.++..+.++++|+....++.+...+++- ..+.++.+
T Consensus 41 ~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~----~~~~~~~l 116 (366)
T 4fo4_A 41 KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKISGGLRVGAAVGAAPG----NEERVKAL 116 (366)
T ss_dssp TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTTTSCCCEEECCSCTT----CHHHHHHH
T ss_pred cccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCCHHHHHHHHHHHHhcCceeEEEEeccChh----HHHHHHHH
Confidence 45788888 5888876555555555566666 578888899999987655667776555532 36789999
Q ss_pred HHcCCcEEEe--cCCChhhHHHHHHHHHHc--CCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCC----C--CC
Q 021527 164 RDIGIRGLVV--PDVPLEETESLQKEAMKN--KIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGA----R--AS 233 (311)
Q Consensus 164 ~~aGadGvii--pDlp~ee~~~~~~~~~~~--gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~----~--~~ 233 (311)
.++|+|.|++ ..-..++..+..+.+++. ++.++.- +-.| .+..+.+.+..-.++.+ ..| -|+ + ..
T Consensus 117 ieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G-~v~t-~e~A~~a~~aGAD~I~v--G~g-pGs~~~tr~~~g 191 (366)
T 4fo4_A 117 VEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG-NVAT-AEGARALIEAGVSAVKV--GIG-PGSICTTRIVTG 191 (366)
T ss_dssp HHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEE-EECS-HHHHHHHHHHTCSEEEE--CSS-CSTTBCHHHHHC
T ss_pred HhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEee-eeCC-HHHHHHHHHcCCCEEEE--ecC-CCCCCCcccccC
Confidence 9999999876 222334555555556555 5443321 2234 34455554544444443 111 111 1 01
Q ss_pred CCchHHHHHHHHhh---cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 234 ISGHVQTLLREIKE---SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 234 ~~~~~~~~l~~vk~---~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
......+.+.++++ ..++||++.+||++++++.+++.+|||+|.+||+|...-+
T Consensus 192 ~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 192 VGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 248 (366)
T ss_dssp CCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred cccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCC
Confidence 11112344555543 4689999999999999999999999999999999998664
No 65
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.23 E-value=2.8e-11 Score=113.28 Aligned_cols=180 Identities=17% Similarity=0.162 Sum_probs=123.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCC---EEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSD---IIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD---~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
..++.=+ +-++.+.+.+.++.+.++|+| +||+.+ +.|...| .++ .|.+.+.+.++++++|+.++
T Consensus 94 ~p~~~~i--~g~~~~~~~~~a~~~~~~g~d~~~~iein~--~~P~~~g-------~~~--~g~~~~~~~~ii~~vr~~~~ 160 (314)
T 2e6f_A 94 KPLFLSI--SGLSVEENVAMVRRLAPVAQEKGVLLELNL--SCPNVPG-------KPQ--VAYDFEAMRTYLQQVSLAYG 160 (314)
T ss_dssp CCEEEEE--CCSSHHHHHHHHHHHHHHHHHHCCEEEEEC--CCCCSTT-------CCC--GGGSHHHHHHHHHHHHHHHC
T ss_pred CcEEEEe--CCCCHHHHHHHHHHHHHhCCCcCceEEEEc--CCCCCCC-------chh--hcCCHHHHHHHHHHHHHhcC
Confidence 3444444 346779999999999999999 999984 6777644 111 24567778889999998889
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcC-CcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aG-adGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
+|+++..+.|. ......++++.+.++| +|++++++.... ++ .+.+.+. +. .+ .....+
T Consensus 161 ~Pv~vK~~~~~-~~~~~~~~a~~~~~aG~~d~i~v~~~~~~------------~~----~i~~~~~--~~-~~-~~~~~~ 219 (314)
T 2e6f_A 161 LPFGVKMPPYF-DIAHFDTAAAVLNEFPLVKFVTCVNSVGN------------GL----VIDAESE--SV-VI-KPKQGF 219 (314)
T ss_dssp SCEEEEECCCC-CHHHHHHHHHHHHTCTTEEEEEECCCEEE------------EE----CEETTTT--EE-SC-CGGGGE
T ss_pred CCEEEEECCCC-CHHHHHHHHHHHHhcCCceEEEEeCCCCc------------cc----cccCCCC--Cc-cc-ccCcCC
Confidence 99999876552 2223456788889999 999999875421 00 0111100 00 00 000011
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.|.+|. ...+...++++++|+.+ ++||++.+||+|++++.+++..|||+|.|||+++.
T Consensus 220 ------gG~sg~--~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 220 ------GGLGGK--YILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp ------EEEESG--GGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH
T ss_pred ------CccCcc--cccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh
Confidence 123342 12223357899999988 99999999999999999999999999999999996
No 66
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.23 E-value=2.3e-10 Score=115.30 Aligned_cols=177 Identities=16% Similarity=0.190 Sum_probs=114.8
Q ss_pred EEEeCCC---CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 67 PYITAGD---PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 67 ~yi~~G~---P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.|+..+. |+...+.+.++.+.++|+++|++= ++-.+..... +..+.++++.++.++|++
T Consensus 12 lYlITd~~~~~~~~~l~~~ve~al~~Gv~~vQlR----~K~~~~~~~~--------------~~a~~l~~l~~~~~v~li 73 (540)
T 3nl6_A 12 LYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIR----EKDADTKFFI--------------EEALQIKELCHAHNVPLI 73 (540)
T ss_dssp EEEEC-CTTCCTTCCHHHHHHHHHHTTCSEEEEC----CSSSCTTHHH--------------HHHHHHHHHHHHTTCCEE
T ss_pred EEEEECchhccCcchHHHHHHHHHHCCCCEEEEe----cCCCCHHHHH--------------HHHHHHHHHHHhcCCEEE
Confidence 4664443 334578999999999999999994 4433321111 112344455566889999
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc---e
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG---F 218 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g---f 218 (311)
+. ++++.+.+.|+|||+++ |+|..+.+++ .|-+.++.++-++.++- .+..+ .| .
T Consensus 74 IN------------D~~dlA~~~gAdGVHLgq~dl~~~~ar~~------lg~~~iiG~S~ht~eea-~~A~~--~G~~~a 132 (540)
T 3nl6_A 74 IN------------DRIDVAMAIGADGIHVGQDDMPIPMIRKL------VGPDMVIGWSVGFPEEV-DELSK--MGPDMV 132 (540)
T ss_dssp EC------------SCSHHHHHTTCSEEEECTTSSCHHHHHHH------HCTTSEEEEEECSHHHH-HHHHH--TCC--C
T ss_pred Ee------------CcHHHHHHcCCCEEEEChhhcCHHHHHHH------hCCCCEEEEECCCHHHH-HHHHH--cCCCCC
Confidence 93 24567788999999997 7776554432 24456667777776554 33323 45 6
Q ss_pred EEEE--ecCCccCCCCCC--CchHHHHHHHHhhc------CCCcEEEeeCCCCHHHHHHHHH--------cCCcEEEEhh
Q 021527 219 VYLV--SSIGVTGARASI--SGHVQTLLREIKES------STKPVAVGFGISKPEHVQQVAG--------WGADGVIVGS 280 (311)
Q Consensus 219 iY~v--s~~G~TG~~~~~--~~~~~~~l~~vk~~------~~~Pv~vGfGIst~e~v~~v~~--------~GADGvIVGS 280 (311)
.|+. +.+ .|.++.+. ++--.+.++++++. .++|+++=+||+ ++++.++++ .|||||.|+|
T Consensus 133 DYv~~Gpvf-~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~-~~ni~~v~~~~~~~g~~~GadgvAVvs 210 (540)
T 3nl6_A 133 DYIGVGTLF-PTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLH-PDNIERVLYQCVSSNGKRSLDGICVVS 210 (540)
T ss_dssp CEEEESCCS-CCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCC-TTTHHHHHHHCBCTTSSCBCSCEEESH
T ss_pred CEEEEcCCC-CCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCC-HHHHHHHHHhhcccccccCceEEEEeH
Confidence 7773 333 34444443 22223455555543 489999999995 799999997 8999999999
Q ss_pred Hhhc
Q 021527 281 AMVK 284 (311)
Q Consensus 281 aiv~ 284 (311)
+|.+
T Consensus 211 aI~~ 214 (540)
T 3nl6_A 211 DIIA 214 (540)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9996
No 67
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.21 E-value=7.8e-11 Score=112.66 Aligned_cols=166 Identities=18% Similarity=0.253 Sum_probs=109.4
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcC--CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGV--PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~--PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
..+++.|...+| +.+.+.++.+.++|+|.|||.. |+++...|| .-.+|. .+.+.+.++++.+++.+++
T Consensus 58 ~p~~vQL~g~~p--~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~------~G~~l~--~~~~~~~eiv~av~~~v~~ 127 (350)
T 3b0p_A 58 HPIALQLAGSDP--KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGG------YGACLL--LDLARVREILKAMGEAVRV 127 (350)
T ss_dssp CSEEEEEECSCH--HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTT------CGGGGG--GCHHHHHHHHHHHHHHCSS
T ss_pred CeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCC------cchhHH--hCHHHHHHHHHHHHHHhCC
Confidence 457777775454 8899999999999999999964 553332221 000111 2567788899999988899
Q ss_pred cEEE---EecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 141 PIAL---FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 141 Piil---m~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
||.+ +++.+........+|++.+.++|+|+|++.+-... .
T Consensus 128 PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~--------------------------~----------- 170 (350)
T 3b0p_A 128 PVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL--------------------------L----------- 170 (350)
T ss_dssp CEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC--------------------------------------
T ss_pred ceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchh--------------------------c-----------
Confidence 9988 34433211012345677777788888765431100 0
Q ss_pred eEEEEecCCccCCCC-CCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSIGVTGARA-SISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~G~TG~~~-~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|.+|... ..++...++++++|+.+ ++||++++||+|++++.++++ |||+|.||++++.
T Consensus 171 --------g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~ 230 (350)
T 3b0p_A 171 --------ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYE 230 (350)
T ss_dssp -----------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHH
T ss_pred --------ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHh
Confidence 0111100 01111246789999988 899999999999999999998 9999999998764
No 68
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.19 E-value=2.6e-09 Score=96.25 Aligned_cols=194 Identities=10% Similarity=0.107 Sum_probs=126.6
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
.+++-+-. .+.++..+.++++.++|++++|+. +.+| ++ .+.++++++++. .+.
T Consensus 18 ~ii~vir~--~~~~~~~~~~~al~~gGv~~iel~--~k~~--~~--------------------~~~i~~l~~~~~-~l~ 70 (224)
T 1vhc_A 18 KIVPVIAL--DNADDILPLADTLAKNGLSVAEIT--FRSE--AA--------------------ADAIRLLRANRP-DFL 70 (224)
T ss_dssp CEEEEECC--SSGGGHHHHHHHHHHTTCCEEEEE--TTST--TH--------------------HHHHHHHHHHCT-TCE
T ss_pred CeEEEEeC--CCHHHHHHHHHHHHHcCCCEEEEe--ccCc--hH--------------------HHHHHHHHHhCc-CcE
Confidence 46666654 345788999999999999999997 3332 11 245666665542 222
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+ ++ +.++ ..+-++.+.++|+|+++.|... .+..+.++++|...++-+ .|+.+ +.+. ...|..|+.-
T Consensus 71 v-ga-Gtvl---~~d~~~~A~~aGAd~v~~p~~d----~~v~~~ar~~g~~~i~Gv--~t~~e-~~~A--~~~Gad~vk~ 136 (224)
T 1vhc_A 71 I-AA-GTVL---TAEQVVLAKSSGADFVVTPGLN----PKIVKLCQDLNFPITPGV--NNPMA-IEIA--LEMGISAVKF 136 (224)
T ss_dssp E-EE-ESCC---SHHHHHHHHHHTCSEEECSSCC----HHHHHHHHHTTCCEECEE--CSHHH-HHHH--HHTTCCEEEE
T ss_pred E-ee-CcEe---eHHHHHHHHHCCCCEEEECCCC----HHHHHHHHHhCCCEEecc--CCHHH-HHHH--HHCCCCEEEE
Confidence 2 22 1232 2577889999999999988532 335567788999887764 34444 3333 2356667632
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHhhchhh-hcCCchhHHHHHH
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAMVKLLG-EAQSPEEGLKELE 300 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSaiv~~~~-~~~~~~~~~~~~~ 300 (311)
+. .. ...-.++++.+++.. ++|+++-+||+ ++|+.++++. |++++. ||+|++.-. +..++++-.+..+
T Consensus 137 -Fp--a~----~~gG~~~lk~l~~~~~~ipvvaiGGI~-~~N~~~~l~agga~~v~-gS~i~~~~~i~~~~~~~i~~~a~ 207 (224)
T 1vhc_A 137 -FP--AE----ASGGVKMIKALLGPYAQLQIMPTGGIG-LHNIRDYLAIPNIVACG-GSWFVEKKLIQSNNWDEIGRLVR 207 (224)
T ss_dssp -TT--TT----TTTHHHHHHHHHTTTTTCEEEEBSSCC-TTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCHHHHHHHHH
T ss_pred -ee--Cc----cccCHHHHHHHHhhCCCCeEEEECCcC-HHHHHHHHhcCCCEEEE-EchhcCcchhccCCHHHHHHHHH
Confidence 22 10 111247899999987 79999999996 7999999998 999999 999997432 2234444444445
Q ss_pred HHHHHHH
Q 021527 301 KFAKSLK 307 (311)
Q Consensus 301 ~~~~~l~ 307 (311)
+|++.++
T Consensus 208 ~~~~~~~ 214 (224)
T 1vhc_A 208 EVIDIIK 214 (224)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555443
No 69
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.16 E-value=3.6e-09 Score=95.34 Aligned_cols=189 Identities=13% Similarity=0.132 Sum_probs=125.0
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIA 143 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPii 143 (311)
+++-+.. .+.++..+.++++.++|++++|+. +.+| ...+.++++++++ ++-+.
T Consensus 28 ii~V~r~--~~~~~~~~~~~al~~gGv~~iel~--~k~~----------------------~~~~~i~~l~~~~~~~~ig 81 (225)
T 1mxs_A 28 ILPVITI--AREEDILPLADALAAGGIRTLEVT--LRSQ----------------------HGLKAIQVLREQRPELCVG 81 (225)
T ss_dssp EEEEECC--SCGGGHHHHHHHHHHTTCCEEEEE--SSST----------------------HHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEeC--CCHHHHHHHHHHHHHCCCCEEEEe--cCCc----------------------cHHHHHHHHHHhCcccEEe
Confidence 6665543 356889999999999999999997 2322 1134566666554 33232
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
.- . +. ..+.++.+.++|+|+++.|... .+..+.++++|++.++-+ .|+.| +.+ ....|..|+.-
T Consensus 82 ag---t-vl---~~d~~~~A~~aGAd~v~~p~~d----~~v~~~~~~~g~~~i~G~--~t~~e-~~~--A~~~Gad~vk~ 145 (225)
T 1mxs_A 82 AG---T-VL---DRSMFAAVEAAGAQFVVTPGIT----EDILEAGVDSEIPLLPGI--STPSE-IMM--GYALGYRRFKL 145 (225)
T ss_dssp EE---C-CC---SHHHHHHHHHHTCSSEECSSCC----HHHHHHHHHCSSCEECEE--CSHHH-HHH--HHTTTCCEEEE
T ss_pred eC---e-Ee---eHHHHHHHHHCCCCEEEeCCCC----HHHHHHHHHhCCCEEEee--CCHHH-HHH--HHHCCCCEEEE
Confidence 22 1 22 2478899999999999988543 346677788999887753 45544 333 23567777732
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhhHhhchhh-hcCCchhHHHHHH
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAG-WGADGVIVGSAMVKLLG-EAQSPEEGLKELE 300 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGSaiv~~~~-~~~~~~~~~~~~~ 300 (311)
+. +. ...-.++++.+++.. ++|+++-+||+ ++|+.++++ .|+|+|. ||+|++.-. +.++ .+++.
T Consensus 146 -FP--a~----~~~G~~~lk~i~~~~~~ipvvaiGGI~-~~N~~~~l~~~Ga~~v~-gSai~~~~~i~~~~----~~~i~ 212 (225)
T 1mxs_A 146 -FP--AE----ISGGVAAIKAFGGPFGDIRFCPTGGVN-PANVRNYMALPNVMCVG-TTWMLDSSWIKNGD----WARIE 212 (225)
T ss_dssp -TT--HH----HHTHHHHHHHHHTTTTTCEEEEBSSCC-TTTHHHHHHSTTBCCEE-ECTTSCHHHHHTTC----HHHHH
T ss_pred -cc--Cc----cccCHHHHHHHHhhCCCCeEEEECCCC-HHHHHHHHhccCCEEEE-EchhcCchhhccCC----HHHHH
Confidence 21 00 000147899999887 89999999996 799999999 6999999 999997421 1222 34555
Q ss_pred HHHHHHHh
Q 021527 301 KFAKSLKS 308 (311)
Q Consensus 301 ~~~~~l~~ 308 (311)
+.++++.+
T Consensus 213 ~~a~~~~~ 220 (225)
T 1mxs_A 213 ACSAEAIA 220 (225)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 70
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.14 E-value=6e-09 Score=96.41 Aligned_cols=234 Identities=18% Similarity=0.210 Sum_probs=140.9
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHH--HHH-HHHcCCCH
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAA--ATR-SLARGTNF 124 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a--~~~-Al~~G~~~ 124 (311)
+.|-+.|++..++|++. .-.-+|.. =.+|..+++|+|.|-+ |..|.+=+.- +.. -|..|-.-
T Consensus 14 ~~il~~l~~~i~~~~~i--ig~gaGtG------lsAk~~e~gGaDlii~-------ynsGrfR~~G~~slag~lpygnaN 78 (286)
T 2p10_A 14 SELVDRFQKKIRAGEPI--IGGGAGTG------LSAKSEEAGDIDLIVI-------YNSGRYRMAGRGSLAGLLAYGNAN 78 (286)
T ss_dssp HHHHHHHHHHHHTTCCE--EEEEESSH------HHHHHHHHTTCSEEEE-------CHHHHHHHTTCCGGGGGBTEEEHH
T ss_pred HHHHHHHHHHHhcCCce--EEEecccc------hhhHHHHhCCCCEEEE-------eccchhhhcCccchhhhccccCHH
Confidence 34555665555555543 33455654 5677888999999998 2223221100 000 00011112
Q ss_pred HHHHHHHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecC-----------------CChhhHHHHHH
Q 021527 125 NAILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPD-----------------VPLEETESLQK 186 (311)
Q Consensus 125 ~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipD-----------------lp~ee~~~~~~ 186 (311)
+-++++.+++-..+ ++||+.-......+ ..+..|++.++++|+.|++..- +.+++..++..
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~-~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~ 157 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPF-MVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIA 157 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTT-CCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCC-cCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHH
Confidence 34577888887765 78987753222222 2568899999999999995531 23445667888
Q ss_pred HHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe---cCCccCCCCCCC-----chHHHHHHHHhhcC-CCcEEEee
Q 021527 187 EAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS---SIGVTGARASIS-----GHVQTLLREIKESS-TKPVAVGF 257 (311)
Q Consensus 187 ~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs---~~G~TG~~~~~~-----~~~~~~l~~vk~~~-~~Pv~vGf 257 (311)
.+++.|+..+.++. + ++..+.+++....++.+-. .-|..|+..... .-+.+.++.+|+.. ++.|+++.
T Consensus 158 ~A~~~gL~Ti~~v~--~-~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 158 EAHKLDLLTTPYVF--S-PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp HHHHTTCEECCEEC--S-HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEES
T ss_pred HHHHCCCeEEEecC--C-HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 89999987766653 2 3444566666666555421 112233332221 12344455555543 67777766
Q ss_pred -CCCCHHHHHHHHHc--CCcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 258 -GISKPEHVQQVAGW--GADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 258 -GIst~e~v~~v~~~--GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
||++|||++.+++. |+||++.+|++.|.- ..+.++++++.+|.
T Consensus 235 GpIstpeDv~~~l~~t~G~~G~~gASsier~p--------~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 235 GPIANPEDARFILDSCQGCHGFYGASSMERLP--------AEEAIRSQTLAFKA 280 (286)
T ss_dssp TTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH--------HHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHhcCCCccEEEeehhhhcCC--------HHHHHHHHHHHHHh
Confidence 99999999999999 999999999999953 23467777777775
No 71
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=99.13 E-value=1.8e-08 Score=92.18 Aligned_cols=198 Identities=14% Similarity=0.222 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHcCCccEEEEEe-----CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCC-CChHHHHHHHHHHHHcC
Q 021527 48 VGLAETFTRLKKQGKVALIPYIT-----AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPL-ADGPVIQAAATRSLARG 121 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~-----~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~-aDGp~Iq~a~~~Al~~G 121 (311)
..+.+.+.+..++|+..+|.=+= -|..+. .-.++++. .++||+.|-+= +||- --|
T Consensus 31 ~~~~~~l~~~~~~~~~~iIAEiKraSPSkg~i~~-dp~~iA~~-~~~GA~aiSVL---Td~~~F~G-------------- 91 (258)
T 4a29_A 31 ISLNERILEFNKRNITAIIAVYERKSPSGLDVER-DPIEYAKF-MERYAVGLSIT---TEEKYFNG-------------- 91 (258)
T ss_dssp CCHHHHHHHHHHTTCCCEEEEECSBCTTSCBCCC-CHHHHHHH-HTTTCSEEEEE---CCSTTTCC--------------
T ss_pred cCHHHHHHHHhhCCCcEEEEEEecCCCCCCCccC-CHHHHHHH-HhCCCeEEEEe---CCCCCCCC--------------
Confidence 34667777777788889998772 233322 23566664 56899999984 3332 223
Q ss_pred CCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhhHHHHHHHHHHcCCCeEEEe
Q 021527 122 TNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEETESLQKEAMKNKIELVLFT 199 (311)
Q Consensus 122 ~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee~~~~~~~~~~~gi~~I~li 199 (311)
+ ++.++++|+.+++||+--= +.. ... -+..++..|||+|++ .-|+.++..++.+.++..|++.+.=+
T Consensus 92 -s----~~~L~~vr~~v~lPvLrKD----Fii-d~y-QI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEV 160 (258)
T 4a29_A 92 -S----YETLRKIASSVSIPILMSD----FIV-KES-QIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILI 160 (258)
T ss_dssp -C----HHHHHHHHTTCSSCEEEES----CCC-SHH-HHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred -C----HHHHHHHHHhcCCCEeecc----ccc-cHH-HHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhc
Confidence 2 3577888989999986532 211 111 255688899999876 35666788999999999999977655
Q ss_pred CCCChHHHHHHHHHhCCceEEEEecCCccCCC-CCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEE
Q 021527 200 TPTTPTDRMKAIVEASEGFVYLVSSIGVTGAR-ASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 200 sp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~-~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGv 276 (311)
. + ++.++...+....+| |+..-. ..+..++ +...++.... ++.++...||++++|+.++.++|+|||
T Consensus 161 h--~-~~El~rAl~~~a~iI------GINNRnL~tf~vdl-~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 161 N--D-ENDLDIALRIGARFI------GIMSRDFETGEINK-ENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp S--S-HHHHHHHHHTTCSEE------EECSBCTTTCCBCH-HHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred c--h-HHHHHHHhcCCCcEE------EEeCCCccccccCH-HHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEE
Confidence 3 3 344555445444443 332110 1123333 3455555553 577889999999999999999999999
Q ss_pred EEhhHhhch
Q 021527 277 IVGSAMVKL 285 (311)
Q Consensus 277 IVGSaiv~~ 285 (311)
.||++|++.
T Consensus 231 LVGealmr~ 239 (258)
T 4a29_A 231 LISSSLMRN 239 (258)
T ss_dssp EECHHHHHC
T ss_pred EECHHHhCC
Confidence 999999983
No 72
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.13 E-value=8.3e-09 Score=92.26 Aligned_cols=192 Identities=17% Similarity=0.168 Sum_probs=126.8
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcE
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPI 142 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPi 142 (311)
..+++-+.. .+.++..+.++++.++|++++|+. +.+| ++ .+.++++++++.-.+
T Consensus 16 ~~~i~v~r~--~~~~~~~~~~~al~~gGv~~iel~--~k~~--~~--------------------~~~i~~l~~~~~~~~ 69 (214)
T 1wbh_A 16 GPVVPVIVV--KKLEHAVPMAKALVAGGVRVLNVT--LRTE--CA--------------------VDAIRAIAKEVPEAI 69 (214)
T ss_dssp CSEEEEECC--SSGGGHHHHHHHHHHTTCCEEEEE--SCST--TH--------------------HHHHHHHHHHCTTSE
T ss_pred CCEEEEEEC--CCHHHHHHHHHHHHHcCCCEEEEe--CCCh--hH--------------------HHHHHHHHHHCcCCE
Confidence 457777754 345789999999999999999998 3332 11 245666665543222
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
+. +-+ +.. .+.++.+.++|+|+++.|... .+..+.++++|++.++-+ .|+.|- .+. ...|..|+.
T Consensus 70 vg--agt-vi~---~d~~~~A~~aGAd~v~~p~~d----~~v~~~~~~~g~~~i~G~--~t~~e~-~~A--~~~Gad~v~ 134 (214)
T 1wbh_A 70 VG--AGT-VLN---PQQLAEVTEAGAQFAISPGLT----EPLLKAATEGTIPLIPGI--STVSEL-MLG--MDYGLKEFK 134 (214)
T ss_dssp EE--EES-CCS---HHHHHHHHHHTCSCEEESSCC----HHHHHHHHHSSSCEEEEE--SSHHHH-HHH--HHTTCCEEE
T ss_pred Ee--eCE-EEE---HHHHHHHHHcCCCEEEcCCCC----HHHHHHHHHhCCCEEEec--CCHHHH-HHH--HHCCCCEEE
Confidence 22 212 321 467889999999999998543 346677788999888764 344443 332 246777763
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHhhchhh-hcCCchhHHHHH
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAMVKLLG-EAQSPEEGLKEL 299 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSaiv~~~~-~~~~~~~~~~~~ 299 (311)
- +. .. ...-.++++.+++.. ++|+++-+||+ ++|+.++++. |++|+. ||++++.-. +.++ .+++
T Consensus 135 ~-Fp--a~----~~gG~~~lk~i~~~~~~ipvvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~~~~~~~----~~~i 201 (214)
T 1wbh_A 135 F-FP--AE----ANGGVKALQAIAGPFSQVRFCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPADALEAGD----YDRI 201 (214)
T ss_dssp E-TT--TT----TTTHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHHHHHHTC----HHHH
T ss_pred E-ec--Cc----cccCHHHHHHHhhhCCCCeEEEECCCC-HHHHHHHHhcCCCeEEE-eccccChhhhhcCC----HHHH
Confidence 2 22 10 111247899999987 89999999996 7999999998 999999 999997532 1122 3455
Q ss_pred HHHHHHHHh
Q 021527 300 EKFAKSLKS 308 (311)
Q Consensus 300 ~~~~~~l~~ 308 (311)
.+.++++.+
T Consensus 202 ~~~a~~~~~ 210 (214)
T 1wbh_A 202 TKLAREAVE 210 (214)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 73
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.12 E-value=2.5e-09 Score=95.88 Aligned_cols=191 Identities=19% Similarity=0.169 Sum_probs=132.2
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
+..+|+-+..-+| ++..+.+++|.++|++.||+ +++.| +.++.|+++++++.-+
T Consensus 12 ~~~vi~Vir~~~~--~~a~~~a~al~~gGi~~iEv--t~~t~----------------------~a~~~I~~l~~~~p~~ 65 (217)
T 3lab_A 12 TKPLIPVIVIDDL--VHAIPMAKALVAGGVHLLEV--TLRTE----------------------AGLAAISAIKKAVPEA 65 (217)
T ss_dssp SCSEEEEECCSCG--GGHHHHHHHHHHTTCCEEEE--ETTST----------------------THHHHHHHHHHHCTTS
T ss_pred hCCEEEEEEcCCH--HHHHHHHHHHHHcCCCEEEE--eCCCc----------------------cHHHHHHHHHHHCCCC
Confidence 4568887765555 89999999999999999999 55554 1246778888775444
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCC------CeEEEeCCCChHHHHHHHHHhC
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKI------ELVLFTTPTTPTDRMKAIVEAS 215 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi------~~I~lisp~t~~eri~~i~~~a 215 (311)
++.-+ ++.. .+-++.+.++|++-++-|.+.. ++.+.|+++|+ ..++-+ .|+.|-... ..
T Consensus 66 ~IGAG---TVlt---~~~a~~ai~AGA~fivsP~~~~----evi~~~~~~~v~~~~~~~~~PG~--~TptE~~~A---~~ 130 (217)
T 3lab_A 66 IVGAG---TVCT---ADDFQKAIDAGAQFIVSPGLTP----ELIEKAKQVKLDGQWQGVFLPGV--ATASEVMIA---AQ 130 (217)
T ss_dssp EEEEE---CCCS---HHHHHHHHHHTCSEEEESSCCH----HHHHHHHHHHHHCSCCCEEEEEE--CSHHHHHHH---HH
T ss_pred eEeec---cccC---HHHHHHHHHcCCCEEEeCCCcH----HHHHHHHHcCCCccCCCeEeCCC--CCHHHHHHH---HH
Confidence 44333 2321 4568889999999999998743 35677888888 777766 455554432 23
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch--hhhcCCc
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL--LGEAQSP 292 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~--~~~~~~~ 292 (311)
.|+.|+=- +. +. ...-.++++.++... ++|++.-+||+ ++|+.+.++.|++.++.||.++.. +.+ +
T Consensus 131 ~Gad~vK~-FP--a~----~~gG~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~~~~~i~~-~-- 199 (217)
T 3lab_A 131 AGITQLKC-FP--AS----AIGGAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLTESKLLIE-G-- 199 (217)
T ss_dssp TTCCEEEE-TT--TT----TTTHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGGCHHHHHH-T--
T ss_pred cCCCEEEE-Cc--cc----cccCHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhcChhHHhc-C--
Confidence 56655521 11 00 000147899999876 79999999998 899999999999999999999863 222 2
Q ss_pred hhHHHHHHHHHHHH
Q 021527 293 EEGLKELEKFAKSL 306 (311)
Q Consensus 293 ~~~~~~~~~~~~~l 306 (311)
..+++.+.++++
T Consensus 200 --~~~~i~~~a~~~ 211 (217)
T 3lab_A 200 --DWNEVTRRASEI 211 (217)
T ss_dssp --CHHHHHHHHHHS
T ss_pred --CHHHHHHHHHHH
Confidence 245566665554
No 74
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.11 E-value=7.2e-10 Score=112.01 Aligned_cols=200 Identities=14% Similarity=0.123 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCC-CHHHHHHHHHHhhccCCCcEEEEecCc-----ch
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGT-NFNAILSMLKEVVPQMSCPIALFTYYN-----PI 151 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~-~~~~~~~~i~~ir~~~~iPiilm~Y~n-----~i 151 (311)
.-.+.++.+.+.|+|.|++- | .|| +. .|. +-..-+++++++++++++|+++.+-.. ++
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~----d--l~~---------~~-~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~ 344 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFL----N--ITS---------FR-DCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDG 344 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEE----E--EC-------------CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTC
T ss_pred CHHHHHHHHHHcCCCEEEEE----e--CCc---------cc-cccCCCchHHHHHHHHHhhCCCcEEEeCccccchhccc
Confidence 45889999999999999773 1 222 00 000 001235688999988999999886333 24
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCChhh-------------HHHHHHHHHHcCC-CeEEEeCCC---------------
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPLEE-------------TESLQKEAMKNKI-ELVLFTTPT--------------- 202 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~ee-------------~~~~~~~~~~~gi-~~I~lisp~--------------- 202 (311)
+.+...+-++.+.++|+|-|++.-..... ...+.+.++++|- ..+..+...
T Consensus 345 ~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~ 424 (555)
T 1jvn_A 345 TKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVF 424 (555)
T ss_dssp CEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCE
T ss_pred ccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccc
Confidence 56666777899999999999886322221 1234555666773 333333321
Q ss_pred ----------------------------ChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEE
Q 021527 203 ----------------------------TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVA 254 (311)
Q Consensus 203 ----------------------------t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~ 254 (311)
+..+.++++.+..-+.+.+-+ .-..|...+.+ .++++++++.+++||+
T Consensus 425 ~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~-~~~dG~~~G~d---~~li~~l~~~~~iPVI 500 (555)
T 1jvn_A 425 ETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNC-IDKDGSNSGYD---LELIEHVKDAVKIPVI 500 (555)
T ss_dssp ECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECC-GGGTTTCSCCC---HHHHHHHHHHCSSCEE
T ss_pred cccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeC-CCCCCCCCCCC---HHHHHHHHHhCCccEE
Confidence 123555555554334433211 11223333332 4789999998999999
Q ss_pred EeeCCCCHHHHHHHHH-cCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHH
Q 021527 255 VGFGISKPEHVQQVAG-WGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAK 304 (311)
Q Consensus 255 vGfGIst~e~v~~v~~-~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~ 304 (311)
+.+||++++|+.++++ .|+|||+|||+|...- -.++++.++++
T Consensus 501 asGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~-------~~~~e~~~~l~ 544 (555)
T 1jvn_A 501 ASSGAGVPEHFEEAFLKTRADACLGAGMFHRGE-------FTVNDVKEYLL 544 (555)
T ss_dssp ECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTS-------CCHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhcCChHHHHHHHHHcCC-------CCHHHHHHHHH
Confidence 9999999999999998 8999999999997632 12455555543
No 75
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=99.10 E-value=6.1e-09 Score=95.38 Aligned_cols=187 Identities=13% Similarity=0.267 Sum_probs=122.1
Q ss_pred cCCccEEEEEeCCCCCh------hhHHHHHHHHHHCCCCEEEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCHHHHHHHHH
Q 021527 60 QGKVALIPYITAGDPDL------STTAEALKLLDSCGSDIIELGVPYSDPLA-DGPVIQAAATRSLARGTNFNAILSMLK 132 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~------~~~~e~~~~L~~~GaD~IElG~PfsDP~a-DGp~Iq~a~~~Al~~G~~~~~~~~~i~ 132 (311)
.|+..+|.=+=--.|+. ....++++.++++ +..|-+- .||-. -| + ++.++
T Consensus 38 ~~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVl---Td~~~F~g---------------s----~~dL~ 94 (251)
T 1i4n_A 38 KERVKIIAEFKKASPSAGDINADASLEDFIRMYDEL-ADAISIL---TEKHYFKG---------------D----PAFVR 94 (251)
T ss_dssp SSSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEE---CCCSSSCC---------------C----THHHH
T ss_pred CCCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-CCceEEE---ecccccCC---------------C----HHHHH
Confidence 34566777552223332 1567899999998 9999993 23221 11 1 35788
Q ss_pred HhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHH
Q 021527 133 EVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKA 210 (311)
Q Consensus 133 ~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~ 210 (311)
.+|+.+++||+---|. ..+. + +..+.++|+|++++- .++.++..++.+.+++.|++.+.=+. +. +.++.
T Consensus 95 ~ir~~v~lPvLrKDfi----~~~~-q-i~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~--~~-eE~~~ 165 (251)
T 1i4n_A 95 AARNLTCRPILAKDFY----IDTV-Q-VKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVH--SR-EDLEK 165 (251)
T ss_dssp HHHTTCCSCEEEECCC----CSTH-H-HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEEC--SH-HHHHH
T ss_pred HHHHhCCCCEEEeeCC----CCHH-H-HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeC--CH-HHHHH
Confidence 8888899998854322 2222 3 455999999998773 45667788999999999987665443 43 33444
Q ss_pred HHHhCCceEEE-EecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 211 IVEASEGFVYL-VSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 211 i~~~a~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
..+. .|+.++ +...+.++ ...++ +...++.+.. +++++.++||+|+++++++.++ +|||+|||+|++.
T Consensus 166 A~~l-~g~~iIGinnr~l~t----~~~d~-~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 166 VFSV-IRPKIIGINTRDLDT----FEIKK-NVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp HHTT-CCCSEEEEECBCTTT----CCBCT-THHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHC
T ss_pred HHhc-CCCCEEEEeCccccc----CCCCH-HHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 4343 144333 33222222 22222 2344444443 5789999999999999999999 9999999999984
No 76
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.10 E-value=1e-09 Score=97.35 Aligned_cols=156 Identities=13% Similarity=0.115 Sum_probs=102.5
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.++.+.++|+++|++-.+ -.+ .+++.+.++++.+..++++++ | +.
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k----~~~-----------------~~~~~~~i~~l~~~~~~~liv----n--------d~ 62 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKP----ETP-----------------AMYSERLLTLIPEKYHRRIVT----H--------EH 62 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCS----SCC-----------------HHHHHHHHHHSCGGGGGGEEE----S--------SC
T ss_pred HHHHHHHHHCCCCEEEEccC----CCC-----------------HHHHHHHHHHHHHHhCCeEEE----e--------CC
Confidence 58899999999999999632 122 234455677787777888888 3 23
Q ss_pred HHHHHHcCCcEEEecC--CChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE--ecCCccCCCCCC-
Q 021527 160 MSTVRDIGIRGLVVPD--VPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV--SSIGVTGARASI- 234 (311)
Q Consensus 160 i~~~~~aGadGviipD--lp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v--s~~G~TG~~~~~- 234 (311)
++.+.++|+|||.+++ ++..+. . ..+..++..++++. ... . .|..|+. +.+ .|+++.+.
T Consensus 63 ~~~A~~~gadgvhl~~~~~~~~~~---------~--~~~ig~s~~t~~e~-~~A--~-~GaDyv~~g~vf-~t~sk~~~~ 126 (210)
T 3ceu_A 63 FYLKEEFNLMGIHLNARNPSEPHD---------Y--AGHVSCSCHSVEEV-KNR--K-HFYDYVFMSPIY-DSISKVNYY 126 (210)
T ss_dssp TTHHHHTTCSEEECCSSSCSCCTT---------C--CSEEEEEECSHHHH-HTT--G-GGSSEEEECCCC----------
T ss_pred HHHHHHcCCCEEEECccccccccc---------c--CCEEEEecCCHHHH-HHH--h-hCCCEEEECCcC-CCCCCCCCC
Confidence 4678889999999973 322111 1 34555666666553 221 2 4666663 222 24443222
Q ss_pred CchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 235 SGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 235 ~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
++--.+.++++++. .++||++-+||+ ++++.++.+.||+||.|||+|.+.
T Consensus 127 ~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~ 178 (210)
T 3ceu_A 127 STYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNK 178 (210)
T ss_dssp CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTT
T ss_pred CCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcC
Confidence 11123568888776 689999999997 899999999999999999999873
No 77
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.10 E-value=1e-08 Score=96.88 Aligned_cols=149 Identities=15% Similarity=0.219 Sum_probs=103.0
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEecC-cchhccCHHHHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeC
Q 021527 123 NFNAILSMLKEVVPQMSCPIALFTYY-NPILKRGVDNFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTT 200 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~~iPiilm~Y~-n~i~~~g~~~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lis 200 (311)
+.+.+.+.++++++.++.|+.+.... |+ ..++.++.+.+.|+|.|.+. +.| .++.+.+++.|+..+.-+
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~~~----~~~~~~~~~~~~g~d~V~l~~g~p----~~~~~~l~~~g~~v~~~v- 131 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILVSP----WADDLVKVCIEEKVPVVTFGAGNP----TKYIRELKENGTKVIPVV- 131 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETTST----THHHHHHHHHHTTCSEEEEESSCC----HHHHHHHHHTTCEEEEEE-
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCC----CHHHHHHHHHHCCCCEEEECCCCc----HHHHHHHHHcCCcEEEEc-
Confidence 34455668888888777888765432 43 23678888999999999886 344 345566778888766544
Q ss_pred CCChHHHHHHHHHhCCceEEEEec-CC-ccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 201 PTTPTDRMKAIVEASEGFVYLVSS-IG-VTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 201 p~t~~eri~~i~~~a~gfiY~vs~-~G-~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
++. +..+...+..-.++.+... .| .+|. . ...+++.++++..++||++.+||++++++.+++..|||||.|
T Consensus 132 -~s~-~~a~~a~~~GaD~i~v~g~~~GG~~G~---~--~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~v 204 (326)
T 3bo9_A 132 -ASD-SLARMVERAGADAVIAEGMESGGHIGE---V--TTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQM 204 (326)
T ss_dssp -SSH-HHHHHHHHTTCSCEEEECTTSSEECCS---S--CHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred -CCH-HHHHHHHHcCCCEEEEECCCCCccCCC---c--cHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEe
Confidence 333 3344444433333333321 12 2231 1 234778888888899999999999999999999999999999
Q ss_pred hhHhhchhh
Q 021527 279 GSAMVKLLG 287 (311)
Q Consensus 279 GSaiv~~~~ 287 (311)
||+|+...+
T Consensus 205 Gs~~~~~~e 213 (326)
T 3bo9_A 205 GTRFVASVE 213 (326)
T ss_dssp SHHHHTBSS
T ss_pred chHHHcCcc
Confidence 999998764
No 78
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.08 E-value=2.8e-09 Score=97.00 Aligned_cols=180 Identities=13% Similarity=0.205 Sum_probs=124.2
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH-cCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA-RGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~-~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
.+..||| .+.++.+.+.|+|.+++- ..|| +.. ...+ +++++++.++..+|+.+-+
T Consensus 27 ~~~~~dP-----~~~a~~~~~~gad~lhvv------Dld~---------a~~~~~~~----~~~i~~i~~~~~~pl~vGG 82 (243)
T 4gj1_A 27 KVYKYNP-----LKKFKEYEKAGAKELHLV------DLTG---------AKDPSKRQ----FALIEKLAKEVSVNLQVGG 82 (243)
T ss_dssp EECCCCH-----HHHHHHHHHHTCCEEEEE------EHHH---------HHCGGGCC----HHHHHHHHHHCCSEEEEES
T ss_pred cEeCCCH-----HHHHHHHHHCCCCEEEEE------ecCc---------ccccchhH----HHHHHHHHHhcCCCeEecc
Confidence 3456788 899999999999999993 1122 221 2233 3688888888999999976
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEE-e------------------CCCChHHH
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF-T------------------TPTTPTDR 207 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~l-i------------------sp~t~~er 207 (311)
=.+. .+-++.+.++|+|-+++.-..++....+.+.++++|-..+.+ + +..+..+.
T Consensus 83 GIrs------~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~ 156 (243)
T 4gj1_A 83 GIRS------KEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEV 156 (243)
T ss_dssp SCCC------HHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHH
T ss_pred cccc------HHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHH
Confidence 3221 346778889999999999888887777788888888553321 1 11223455
Q ss_pred HHHHHHhCCc-eEEE-EecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 208 MKAIVEASEG-FVYL-VSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 208 i~~i~~~a~g-fiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
++++.+..-+ ++|. ++..| +..+.+. ++++++++.. ++||++++|+++.+|++++.. +++||+|||||..
T Consensus 157 ~~~~~~~g~~eil~t~Id~DG---t~~G~d~---~l~~~l~~~~~~ipviasGGv~~~~Dl~~l~~-~~~gvivg~Al~~ 229 (243)
T 4gj1_A 157 LDFYSNKGLKHILCTDISKDG---TMQGVNV---RLYKLIHEIFPNICIQASGGVASLKDLENLKG-ICSGVIVGKALLD 229 (243)
T ss_dssp HHHHHTTTCCEEEEEETTC--------CCCH---HHHHHHHHHCTTSEEEEESCCCSHHHHHHTTT-TCSEEEECHHHHT
T ss_pred HHHHhhcCCcEEEeeeecccc---cccCCCH---HHHHHHHHhcCCCCEEEEcCCCCHHHHHHHHc-cCchhehHHHHHC
Confidence 5655554333 4444 44444 3344443 6788887764 799999999999999999864 5999999999976
No 79
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.06 E-value=9.9e-10 Score=104.56 Aligned_cols=199 Identities=14% Similarity=0.216 Sum_probs=111.8
Q ss_pred HHHHHHHHc-CCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHH
Q 021527 52 ETFTRLKKQ-GKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSM 130 (311)
Q Consensus 52 ~~f~~~~~~-~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~ 130 (311)
..|+..+.. ....+++-+-.|+. .+ +..+.+++.|+|+||+-.-. |- + ..+... ...++..++.
T Consensus 105 ~~~~~~~~~~~~~pv~~~i~~~~~-~~---~~~~~~~~~gad~i~i~~~~--~~-~--~~~~~~------~~~~~~~~~~ 169 (349)
T 1p0k_A 105 LSYEIVRKENPNGLIFANLGSEAT-AA---QAKEAVEMIGANALQIHLNV--IQ-E--IVMPEG------DRSFSGALKR 169 (349)
T ss_dssp HHHHHHHHHCSSSCEEEEEETTCC-HH---HHHHHHHHTTCSEEEEEECT--TT-T--C--------------CTTHHHH
T ss_pred cceehhhhhCCCceeEEeecCCCC-HH---HHHHHHHhcCCCeEEecccc--hh-h--hcCCCC------CcchHHHHHH
Confidence 344443332 23456777765543 22 23455677899999885322 10 0 001000 0111125678
Q ss_pred HHHhhccCCCcEEEEe--c-CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHH
Q 021527 131 LKEVVPQMSCPIALFT--Y-YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDR 207 (311)
Q Consensus 131 i~~ir~~~~iPiilm~--Y-~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~er 207 (311)
++++|+.+++||++.+ | ++ .++++.+.++|+|+|++..-.-.. .. .+.+ .|
T Consensus 170 i~~vr~~~~~Pv~vK~~~~~~~-------~~~a~~a~~~Gad~I~v~~~ggt~--------------~~---~~e~--~r 223 (349)
T 1p0k_A 170 IEQICSRVSVPVIVKEVGFGMS-------KASAGKLYEAGAAAVDIGGYGGTN--------------FS---KIEN--LR 223 (349)
T ss_dssp HHHHHHHCSSCEEEEEESSCCC-------HHHHHHHHHHTCSEEEEEC--------------------------------
T ss_pred HHHHHHHcCCCEEEEecCCCCC-------HHHHHHHHHcCCCEEEEcCCCCcc--------------hh---hHHH--hh
Confidence 8899988899999974 3 22 467889999999999986311000 00 0000 00
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
.. .+. ......| .+ ..+.|.++++.. ++||++.+||++++|+.+++..|||+|.||++++..+
T Consensus 224 --~~----~~~----~~~~~~g----~~--~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~ 287 (349)
T 1p0k_A 224 --RQ----RQI----SFFNSWG----IS--TAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKAL 287 (349)
T ss_dssp --------CCG----GGGTTCS----CC--HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred --cc----cch----hhhhccC----cc--HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHH
Confidence 00 000 0000001 11 234577777765 8999999999999999999999999999999999976
Q ss_pred hhcCCchhHHHHHHHHHHHHHh
Q 021527 287 GEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
...+ ++...+.+..+.++|+.
T Consensus 288 ~~~g-~~~~~~~~~~~~~~l~~ 308 (349)
T 1p0k_A 288 TDSG-EEGLLEEIQLILEELKL 308 (349)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHH
T ss_pred hhcC-HHHHHHHHHHHHHHHHH
Confidence 4211 11222445555555553
No 80
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.05 E-value=6.3e-10 Score=102.30 Aligned_cols=172 Identities=11% Similarity=0.062 Sum_probs=112.7
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
|...+|| .+.++.+.+.|+|.+++= ..|| .+ ++.++++.+++.+|+.+.+-
T Consensus 34 ~~~~~dp-----~~~A~~~~~~Ga~~l~vv------DL~~--------------~n----~~~i~~i~~~~~~pv~vgGG 84 (260)
T 2agk_A 34 FVSQHPS-----SYYAKLYKDRDVQGCHVI------KLGP--------------NN----DDAAREALQESPQFLQVGGG 84 (260)
T ss_dssp ---CCCH-----HHHHHHHHHTTCTTCEEE------EESS--------------SC----HHHHHHHHHHSTTTSEEESS
T ss_pred cccCCCH-----HHHHHHHHHcCCCEEEEE------eCCC--------------CC----HHHHHHHHhcCCceEEEeCC
Confidence 3355788 899999999999999982 1222 12 24777888788899998764
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhh-----HHHHHHHHHHcCC-CeEEEeCCC-------------------
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-----TESLQKEAMKNKI-ELVLFTTPT------------------- 202 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-----~~~~~~~~~~~gi-~~I~lisp~------------------- 202 (311)
... + -++.+. +|++-+++.-..+++ .+.+.+.++++|- ..+..+...
T Consensus 85 ir~------~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~ 156 (260)
T 2agk_A 85 IND------T-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTD 156 (260)
T ss_dssp CCT------T-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCH------H-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccC
Confidence 321 2 345556 999999987654444 5555666666662 222222110
Q ss_pred -ChH-HHHHHHHHhCCceEEE-EecCCccCCCCCCCchHHHHHHHHhhcC----CCcEEEeeCCCCHHHHHHHHHc--CC
Q 021527 203 -TPT-DRMKAIVEASEGFVYL-VSSIGVTGARASISGHVQTLLREIKESS----TKPVAVGFGISKPEHVQQVAGW--GA 273 (311)
Q Consensus 203 -t~~-eri~~i~~~a~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~----~~Pv~vGfGIst~e~v~~v~~~--GA 273 (311)
... +.++.+.+.+..++|. ++..| ...+.+ .++++++++.+ ++||++++||+++||++++++. |+
T Consensus 157 ~~~~~e~a~~~~~~a~~il~t~i~~dG---~~~G~d---~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~ 230 (260)
T 2agk_A 157 LELNADTFRELRKYTNEFLIHAADVEG---LCGGID---ELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGK 230 (260)
T ss_dssp EEESHHHHHHHTTTCSEEEEEC----------CCCC---HHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHhcCEEEEEeecccc---CcCCCC---HHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCC
Confidence 113 5556665554445554 33333 333332 47899999988 9999999999999999999998 99
Q ss_pred cEEEEhhHh
Q 021527 274 DGVIVGSAM 282 (311)
Q Consensus 274 DGvIVGSai 282 (311)
|||+|||++
T Consensus 231 ~gvivg~al 239 (260)
T 2agk_A 231 VDLTFGSSL 239 (260)
T ss_dssp EEEECCTTB
T ss_pred CEEEeeCCH
Confidence 999999996
No 81
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.05 E-value=3.6e-08 Score=90.26 Aligned_cols=183 Identities=17% Similarity=0.215 Sum_probs=104.2
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCc
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYN 149 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n 149 (311)
|..||+.+...+ ++..+|++++=+-+==-|..-+ ...+++++.+ + ..++.+.- |
T Consensus 26 tgky~~~~~~~~---a~~asg~e~vtva~rR~~~~~~---------------~~~~~~~~~i---~-~~~~~~lp----N 79 (265)
T 1wv2_A 26 TGKYKDLDETRR---AIEASGAEIVTVAVRRTNIGQN---------------PDEPNLLDVI---P-PDRYTILP----N 79 (265)
T ss_dssp CSCSSSHHHHHH---HHHHSCCSEEEEEGGGCCC-------------------------------C-TTTSEEEE----E
T ss_pred cCCCCCHHHHHH---HHHHhCCCeEEEEEEeeccccC---------------CCcchHHhhh---h-hcCCEECC----c
Confidence 666777665544 4566999999995322111000 0112334444 2 23444443 4
Q ss_pred chhccCHHHHHH---HHHH-cC-CcEEE---ecC--CCh---hhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCC
Q 021527 150 PILKRGVDNFMS---TVRD-IG-IRGLV---VPD--VPL---EETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASE 216 (311)
Q Consensus 150 ~i~~~g~~~fi~---~~~~-aG-adGvi---ipD--lp~---ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~ 216 (311)
+--.+..++-++ .+.+ ++ -+=+= ++| ..+ .+..+..+.+.+.|+..+++++++ ..-.+.+.+...
T Consensus 80 Tag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd--~~~akrl~~~G~ 157 (265)
T 1wv2_A 80 TAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDD--PIIARQLAEIGC 157 (265)
T ss_dssp CTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSC--HHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCC
Confidence 444445555443 3455 43 33221 233 111 334444455556699988888876 333344555444
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.++.-....-.|| .++.. .++|+.+++..++||++++||++|+|+.++.++|||||+|||+|.+
T Consensus 158 ~aVmPlg~pIGsG--~Gi~~--~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 158 IAVMPLAGLIGSG--LGICN--PYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp SEEEECSSSTTCC--CCCSC--HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEeCCccCCCC--CCcCC--HHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 4542212211233 23322 4788999998899999999999999999999999999999999997
No 82
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.03 E-value=1.4e-08 Score=93.10 Aligned_cols=180 Identities=18% Similarity=0.240 Sum_probs=104.2
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCc
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYN 149 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n 149 (311)
|..||+.+...+ ++..+|++++=+.+-=.++. ++ .+ +++++.+ + ++++.. |
T Consensus 19 tgky~~~~~~~~---ai~asg~eivtva~rR~~~~-~~------------~~---~~~~~~i---~---~~~~lp----n 69 (268)
T 2htm_A 19 SGKYEDFGVMRE---AIAAAKAEVVTVSVRRVELK-AP------------GH---VGLLEAL---E---GVRLLP----N 69 (268)
T ss_dssp CSSCSCHHHHHH---HHHHTTCSEEEEEEEECC-----------------------CHHHHT---T---TSEEEE----B
T ss_pred cCCCCCHHHHHH---HHHHhCCCEEEEEccccCCC-CC------------Cc---ccHHHHH---h---hhhccC----c
Confidence 667787665544 55669999999863222221 10 01 2233444 2 556655 4
Q ss_pred chhccCHHHHHHH---HHHcCCcEEE----ecC--CCh---hhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 150 PILKRGVDNFMST---VRDIGIRGLV----VPD--VPL---EETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 150 ~i~~~g~~~fi~~---~~~aGadGvi----ipD--lp~---ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
+--.+..++.++. ..+.+..-++ ++| +.. .|..+-.+.+.+.|+..++.++++- .-.+++.+....
T Consensus 70 taG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~--~~ak~l~~~G~~ 147 (268)
T 2htm_A 70 TAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMGPDL--VLAKRLAALGTA 147 (268)
T ss_dssp CTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEECSCH--HHHHHHHHHTCS
T ss_pred ccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeeccCCCH--HHHHHHHhcCCC
Confidence 4444455555442 3443333332 222 111 2333334444555998887776542 334445454333
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhh-cCC-CcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKE-SST-KPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~-~~~-~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.| +..-..-|+..++.. .++++.+++ ..+ +||++++||.+|+|+.++.+.|||||+|||+|.+
T Consensus 148 aV--mPlg~pIGsG~Gi~~--~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 148 TV--MPLAAPIGSGWGVRT--RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp CB--EEBSSSTTTCCCSTT--HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred EE--EecCccCcCCcccCC--HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 33 332111222223322 467889888 668 9999999999999999999999999999999997
No 83
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.99 E-value=6.4e-10 Score=102.62 Aligned_cols=178 Identities=19% Similarity=0.283 Sum_probs=109.4
Q ss_pred HHHHHHHHHHCCCCEEEE--cCCCCCCCCChHHHHHHHHHHHHcCC-CHHHHHHHHHHhhccCCCcEEEEecCcchhccC
Q 021527 79 TAEALKLLDSCGSDIIEL--GVPYSDPLADGPVIQAAATRSLARGT-NFNAILSMLKEVVPQMSCPIALFTYYNPILKRG 155 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IEl--G~PfsDP~aDGp~Iq~a~~~Al~~G~-~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g 155 (311)
+.+.++..+++|+..+.. +.|.+ .| -..|+ ++ .-.+.|++|++.+++||+-..- .|
T Consensus 20 ~~eqa~iae~aGa~av~~l~~~p~d-------------~r-~~gGv~Rm-~dp~~I~~I~~aVsIPVm~k~r------ig 78 (291)
T 3o07_A 20 TPEQAKIAEKSGACAVMALESIPAD-------------MR-KSGKVCRM-SDPKMIKDIMNSVSIPVMAKVR------IG 78 (291)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHH-------------HH-TTTCCCCC-CCHHHHHHHHTTCSSCEEEEEE------TT
T ss_pred CHHHHHHHHHhCchhhhhccCCCch-------------hh-hcCCcccc-CCHHHHHHHHHhCCCCeEEEEe------cC
Confidence 368999999999999998 44431 11 11233 11 1146899999999999988653 23
Q ss_pred HHHHHHHHHHcCCcEEEecC-CChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEec-CCccC----
Q 021527 156 VDNFMSTVRDIGIRGLVVPD-VPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSS-IGVTG---- 229 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviipD-lp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~-~G~TG---- 229 (311)
.-.-.+.+.++|+|-+=..+ +.+.+ ....+.++.++..+++.-.+-.|-+..+. .|+..+-+. ...||
T Consensus 79 h~~EAqilea~GaD~IDesevltpad---~~~~I~k~~f~vpfv~~~~~l~EAlrri~---eGA~mIrTtge~gtg~v~~ 152 (291)
T 3o07_A 79 HFVEAQIIEALEVDYIDESEVLTPAD---WTHHIEKDKFKVPFVCGAKDLGEALRRIN---EGAAMIRTKGEAGTGDVSE 152 (291)
T ss_dssp CHHHHHHHHHTTCSEEEEETTSCCSC---SSCCCCGGGCSSCEEEEESSHHHHHHHHH---HTCSEEEECCCTTSCCTHH
T ss_pred cHHHHHHHHHcCCCEEecccCCCHHH---HHHHhhhhcCCCcEEeeCCCHHHHHHHHH---CCCCEEEecCcCCCccHHH
Confidence 33345567889999763332 12211 11222233333333344455555554443 354444321 10111
Q ss_pred -----------------C-C--------CCCCchHHHHHHHHhhcCCCcEE--EeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 230 -----------------A-R--------ASISGHVQTLLREIKESSTKPVA--VGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 230 -----------------~-~--------~~~~~~~~~~l~~vk~~~~~Pv~--vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
. . ....+ ..++|+++++..++||+ ..+||.||+++.++++.|+|||.|||+
T Consensus 153 av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~a-d~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrA 231 (291)
T 3o07_A 153 AVKHIRRITEEIKACQQLKSEDDIAKVAEEMRV-PVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSG 231 (291)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTS-CHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhcccccCC-CHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchH
Confidence 0 0 01112 25789999998889985 489999999999999999999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
+.+
T Consensus 232 I~~ 234 (291)
T 3o07_A 232 IFK 234 (291)
T ss_dssp GGG
T ss_pred HhC
Confidence 998
No 84
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.92 E-value=1.2e-08 Score=94.70 Aligned_cols=170 Identities=21% Similarity=0.288 Sum_probs=106.8
Q ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCc-chhccC--
Q 021527 79 TAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYN-PILKRG-- 155 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n-~i~~~g-- 155 (311)
..+.+...+++|||.|||. ++ ++.| |.|.. ...++.+++..++||.+|.--. .-|.|.
T Consensus 48 s~~~a~~A~~gGAdRIELc---~~-l~~G-------------GlTPS--~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~ 108 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELC---SG-LSEG-------------GTTPS--MGVLQVVKQSVQIPVFVMIRPRGGDFLYSDR 108 (287)
T ss_dssp SHHHHHHHHHHTCSEEEEC---BC-GGGT-------------CBCCC--HHHHHHHHTTCCSCEEEECCSSSSCSCCCHH
T ss_pred CHHHHHHHHHhCCCEEEEC---CC-CCCC-------------CCCCC--HHHHHHHHHhcCCCeEEEEecCCCCcccCHH
Confidence 4688888899999999997 33 2222 34322 3467777778899999995111 112233
Q ss_pred ----HHHHHHHHHHcCCcEEEec----C--CChhhHHHHHHHHHHcCCCeEEEeC---CCChHHHHHHHHHhCCceEEEE
Q 021527 156 ----VDNFMSTVRDIGIRGLVVP----D--VPLEETESLQKEAMKNKIELVLFTT---PTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 156 ----~~~fi~~~~~aGadGviip----D--lp~ee~~~~~~~~~~~gi~~I~lis---p~t~~eri~~i~~~a~gfiY~v 222 (311)
..+.++.++++|+|||++. | +..+...++.+.++ ++.+.+--+ -..+.+-++.+.+. ||.-+.
T Consensus 109 E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~--~l~vTFHRAFD~~~d~~~Ale~Li~l--GvdrIL 184 (287)
T 3iwp_A 109 EIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR--PLPVTFHRAFDMVHDPMAALETLLTL--GFERVL 184 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT--TSCEEECGGGGGCSCHHHHHHHHHHH--TCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC--CCcEEEECchhccCCHHHHHHHHHHc--CCCEEE
Confidence 2456778999999999996 4 33334555655543 444443221 11345666666665 665444
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHH-cCCcEEE
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAG-WGADGVI 277 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~-~GADGvI 277 (311)
+ +|++...... .+.|+++.+.. .++|++|+||+ ++|+.++.+ .|++-+=
T Consensus 185 T----SG~~~~a~~G-l~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H 236 (287)
T 3iwp_A 185 T----SGCDSSALEG-LPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATEFH 236 (287)
T ss_dssp E----CTTSSSTTTT-HHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSEEE
T ss_pred C----CCCCCChHHh-HHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCEEe
Confidence 3 4444333333 35666665543 48999999997 699999987 8887763
No 85
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.91 E-value=1.2e-08 Score=101.85 Aligned_cols=137 Identities=20% Similarity=0.220 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
...+.++.|.++|+|.|+++.-. | . .+..+++++++++.. ++||++.... .
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~------g--------------~-~~~~~~~i~~ir~~~p~~~Vi~g~v~-------t 282 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSH------G--------------H-SEGVLQRIRETRAAYPHLEIIGGNVA-------T 282 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSC------T--------------T-SHHHHHHHHHHHHHCTTCCEEEEEEC-------S
T ss_pred chHHHHHHHHhccCceEEecccc------c--------------c-chHHHHHHHHHHHHCCCceEEEcccC-------c
Confidence 45788999999999999998432 2 1 134567899999876 8898873221 2
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+.++.+.++|+|++++.--| | +..++ |. ++|. +.+
T Consensus 283 ~e~a~~l~~aGaD~I~Vg~g~--------------G-------s~~~t--r~------------------~~g~--g~p- 318 (496)
T 4fxs_A 283 AEGARALIEAGVSAVKVGIGP--------------G-------SICTT--RI------------------VTGV--GVP- 318 (496)
T ss_dssp HHHHHHHHHHTCSEEEECSSC--------------C-------TTBCH--HH------------------HHCC--CCC-
T ss_pred HHHHHHHHHhCCCEEEECCCC--------------C-------cCccc--cc------------------ccCC--Ccc-
Confidence 457788999999999864111 0 11111 11 1111 011
Q ss_pred hHHHHHHHHhh---cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 237 HVQTLLREIKE---SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 237 ~~~~~l~~vk~---~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
..+.+.++.+ ..++||++++||++++++.+++.+|||+|.+||+|....+
T Consensus 319 -~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 319 -QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 371 (496)
T ss_dssp -HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred -HHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCC
Confidence 1123333333 3479999999999999999999999999999999988664
No 86
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=98.84 E-value=2e-07 Score=88.35 Aligned_cols=138 Identities=18% Similarity=0.268 Sum_probs=94.5
Q ss_pred hhHHHHHHHHHHCC--CCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 77 STTAEALKLLDSCG--SDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 77 ~~~~e~~~~L~~~G--aD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+...+.++.+.++| +|++++.....| .....+.++++|+.++.|+++.+...
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~---------------------~~~~~~~i~~lr~~~~~~~vi~G~v~----- 158 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGH---------------------SNAVINMIQHIKKHLPESFVIAGNVG----- 158 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCC---------------------SHHHHHHHHHHHHHCTTSEEEEEEEC-----
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCC---------------------cHHHHHHHHHHHHhCCCCEEEECCcC-----
Confidence 44567788889999 999998653211 12346788899888765555544111
Q ss_pred CHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCC
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASI 234 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~ 234 (311)
..+.++.+.++|+|+|++..-+ |- + . ..+. . . + .|..| .
T Consensus 159 -s~e~A~~a~~aGad~Ivvs~hg--------------G~--~------~-~~~~--~-~---~-------~g~~g----~ 197 (336)
T 1ypf_A 159 -TPEAVRELENAGADATKVGIGP--------------GK--V------C-ITKI--K-T---G-------FGTGG----W 197 (336)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSC--------------ST--T------C-HHHH--H-H---S-------CSSTT----C
T ss_pred -CHHHHHHHHHcCCCEEEEecCC--------------Cc--e------e-eccc--c-c---C-------cCCch----h
Confidence 1367888999999999885422 00 0 0 1110 0 0 0 01111 0
Q ss_pred CchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 235 SGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 235 ~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.+.++++..++||++.+||++++++.+++..|||+|.||+++..
T Consensus 198 ---~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 198 ---QLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp ---HHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred ---HHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 23568888888899999999999999999999999999999999994
No 87
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.82 E-value=1.3e-07 Score=93.29 Aligned_cols=185 Identities=15% Similarity=0.169 Sum_probs=119.0
Q ss_pred CccEEEEEeCCCCCh------hhHHHHHHHHHHCCCCEEEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCHHHHHHHHHHh
Q 021527 62 KVALIPYITAGDPDL------STTAEALKLLDSCGSDIIELGVPYSDPLA-DGPVIQAAATRSLARGTNFNAILSMLKEV 134 (311)
Q Consensus 62 ~~~li~yi~~G~P~~------~~~~e~~~~L~~~GaD~IElG~PfsDP~a-DGp~Iq~a~~~Al~~G~~~~~~~~~i~~i 134 (311)
+..+|.=+=--.|+. ....++++.++++ |..|-+= .||-. -| + ++.++++
T Consensus 47 ~~~vIaEvKraSPSkG~i~~~~~~~~iA~~y~~~-A~~IsvL---Td~~~F~g---------------s----~~dL~~v 103 (452)
T 1pii_A 47 RTAFILECKKASPSKGVIRDDFDPARIAAIYKHY-ASAISVL---TDEKYFQG---------------S----FNFLPIV 103 (452)
T ss_dssp SCEEEEEECSEETTTEESCSSCCHHHHHHHHTTT-CSEEEEE---CCSTTTCC---------------C----TTHHHHH
T ss_pred CCceEEEecCCCCCCCccCCCCCHHHHHHHHHhh-CcEEEEE---ecccccCC---------------C----HHHHHHH
Confidence 466776552223332 2457889998888 9999992 22211 11 1 2477788
Q ss_pred hccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHH
Q 021527 135 VPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIV 212 (311)
Q Consensus 135 r~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~ 212 (311)
|+.+++||+---|. ....+ +..+..+|+|++++- .++.++..++.+.+++.|++.+.=+ ++. +.++...
T Consensus 104 r~~v~lPvLrKDFI-----~d~~Q-i~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEv--h~~-eE~~~A~ 174 (452)
T 1pii_A 104 SQIAPQPILCKDFI-----IDPYQ-IYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEV--SNE-EEQERAI 174 (452)
T ss_dssp HHHCCSCEEEESCC-----CSHHH-HHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEE--CSH-HHHHHHH
T ss_pred HHhcCCCeEEEecc-----CCHHH-HHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEe--CCH-HHHHHHH
Confidence 88899998654322 22233 455899999998773 5666778899999999998766544 343 4444443
Q ss_pred HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 213 EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 213 ~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+....+|= +...+.+. +..++ +...++.+.. +++++..+||+|++|++++.++ ||||.|||+|++.
T Consensus 175 ~lga~iIG-innr~L~t----~~~dl-~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~ 242 (452)
T 1pii_A 175 ALGAKVVG-INNRDLRD----LSIDL-NRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH 242 (452)
T ss_dssp HTTCSEEE-EESEETTT----TEECT-HHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC
T ss_pred HCCCCEEE-EeCCCCCC----CCCCH-HHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 43333332 22222221 22222 3344444432 6899999999999999999999 9999999999994
No 88
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.82 E-value=6.1e-08 Score=96.54 Aligned_cols=137 Identities=15% Similarity=0.198 Sum_probs=93.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccC
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRG 155 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g 155 (311)
....+.++.|.++|+|+|+++.-..+ ....++.++++++.. ++|+++-...
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~---------------------~~~~~~~v~~i~~~~p~~~Vi~g~v~------- 279 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH---------------------SKGVIERVRWVKQTFPDVQVIGGNIA------- 279 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS---------------------BHHHHHHHHHHHHHCTTSEEEEEEEC-------
T ss_pred cchHHHHHHHhhcccceEEecccCCc---------------------chhHHHHHHHHHHHCCCceEEEeeeC-------
Confidence 35678899999999999999833311 134567889998876 7898874221
Q ss_pred HHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCCh-HHHHHHHHHhCCceEEEEecCCccCCCCCC
Q 021527 156 VDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP-TDRMKAIVEASEGFVYLVSSIGVTGARASI 234 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~-~eri~~i~~~a~gfiY~vs~~G~TG~~~~~ 234 (311)
..+.++.+.++|+|+|.+.-- |.+. ..|. .+|. +.
T Consensus 280 t~e~a~~l~~aGaD~I~vg~g------------------------~Gs~~~t~~------------------~~g~--g~ 315 (490)
T 4avf_A 280 TAEAAKALAEAGADAVKVGIG------------------------PGSICTTRI------------------VAGV--GV 315 (490)
T ss_dssp SHHHHHHHHHTTCSEEEECSS------------------------CSTTCHHHH------------------HTCB--CC
T ss_pred cHHHHHHHHHcCCCEEEECCC------------------------CCcCCCccc------------------cCCC--Cc
Confidence 245678899999999986311 1110 0111 0111 11
Q ss_pred CchHHHHHHHHhh---cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 235 SGHVQTLLREIKE---SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 235 ~~~~~~~l~~vk~---~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
+ . .+.+.++++ ..++||++.+||++++++.+++.+|||+|.|||+|...-+
T Consensus 316 p-~-~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~E 369 (490)
T 4avf_A 316 P-Q-ISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEE 369 (490)
T ss_dssp C-H-HHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTT
T ss_pred c-H-HHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCC
Confidence 1 1 234444444 3479999999999999999999999999999999988554
No 89
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.82 E-value=3.4e-07 Score=98.41 Aligned_cols=195 Identities=20% Similarity=0.197 Sum_probs=118.4
Q ss_pred HHHHHHHHHcC-CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHH--HcCCCHHHH
Q 021527 51 AETFTRLKKQG-KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSL--ARGTNFNAI 127 (311)
Q Consensus 51 ~~~f~~~~~~~-~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al--~~G~~~~~~ 127 (311)
.+.+.++++.. ...++.-+..| .+.+.+.+.++.++++|+|+|||.+ +.|..-+ .+.+ ..+.+.+.+
T Consensus 622 ~~~i~~~~~~~~~~~~i~~i~~g-~~~~~~~~~a~~~~~~g~d~iein~--~~P~~~~-------~~~~G~~~~~~~~~~ 691 (1025)
T 1gte_A 622 CQSVTELKADFPDNIVIASIMCS-YNKNDWMELSRKAEASGADALELNL--SCPHGMG-------ERGMGLACGQDPELV 691 (1025)
T ss_dssp HHHHHHHHHHCTTSEEEEEECCC-SCHHHHHHHHHHHHHTTCSEEEEEC--CCBCCCC------------SBGGGCHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEecCC-CCHHHHHHHHHHHHhcCCCEEEEEC--CCCCCCC-------CCCcccccccCHHHH
Confidence 33444555432 33454444444 4568999999999999999999974 3343211 0000 011355667
Q ss_pred HHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCCh-HH
Q 021527 128 LSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP-TD 206 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~-~e 206 (311)
.++++.+|+.+++||++-.-.|. ..+.++++.+.++|+|++++..-... ..+++.-.--.|... ..
T Consensus 692 ~~iv~~v~~~~~~Pv~vK~~~~~---~~~~~~a~~~~~~G~d~i~v~Nt~~~----------~~~~~~~~~~~~~~~~~g 758 (1025)
T 1gte_A 692 RNICRWVRQAVQIPFFAKLTPNV---TDIVSIARAAKEGGADGVTATNTVSG----------LMGLKADGTPWPAVGAGK 758 (1025)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCS---SCHHHHHHHHHHHTCSEEEECCCEEE----------CCCBCTTSCBSSCBTTTT
T ss_pred HHHHHHHHHhhCCceEEEeCCCh---HHHHHHHHHHHHcCCCEEEEeccccc----------cccccccccccccccccc
Confidence 78999999888999998653331 13567888889999999988421100 000100000000000 00
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
| ...+ |.+|. ...+...+++.++++.+ ++||+..+||+|++++.+++..|||+|.||++++.
T Consensus 759 r------~~~g--------g~sg~--~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 759 R------TTYG--------GVSGT--AIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp B------BCCE--------EEESG--GGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred c------ccCC--------CCCcc--cchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 0 0000 11221 11122246889998887 89999999999999999999999999999999996
No 90
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.80 E-value=3.1e-08 Score=96.64 Aligned_cols=162 Identities=18% Similarity=0.255 Sum_probs=95.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-----------------cC
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP-----------------QM 138 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~-----------------~~ 138 (311)
.+++.+.++.+.+. +|+|||.+ |.|.-.| .+.++..-.+.++++.+++.++ ..
T Consensus 198 ~~Dy~~~a~~l~~~-ad~ieiNi--ScPNt~G-------l~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~ 267 (415)
T 3i65_A 198 VDDLKYCINKIGRY-ADYIAINV--SSPNTPG-------LRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTK 267 (415)
T ss_dssp HHHHHHHHHHHGGG-CSEEEEEC--CCCC---------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSS
T ss_pred HHHHHHHHHHHHhh-CCEEEEEC--CCCCCCC-------cccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCC
Confidence 57888889998877 99999986 5565544 2233333334444444444321 13
Q ss_pred CCc-EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 139 SCP-IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 139 ~iP-iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
++| |.+-.-.|.- .-.+.++++.+.++|+|||++..-..+. .+++ + . ....|
T Consensus 268 ~~P~V~VKi~pd~~-~~~i~~iA~~a~~aGaDgIiv~Ntt~~r----------~dl~--------~-------~-~~~~G 320 (415)
T 3i65_A 268 KKPLVFVKLAPDLN-QEQKKEIADVLLETNIDGMIISNTTTQI----------NDIK--------S-------F-ENKKG 320 (415)
T ss_dssp SCCEEEEEECSCCC-HHHHHHHHHHHHHHTCSEEEECCCBSCC----------CCCG--------G-------G-TTCCS
T ss_pred CCCeEEEEecCCCC-HHHHHHHHHHHHHcCCcEEEEeCCCccc----------cccc--------c-------c-ccccC
Confidence 689 7775422200 0013455666667777777665321110 0110 0 0 00011
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|.+|. .+.+...+++.++++.+ ++||+..+||+|++++.+.+..|||+|.|||+++.
T Consensus 321 --------GlSG~--a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~ 379 (415)
T 3i65_A 321 --------GVSGA--KLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 379 (415)
T ss_dssp --------EEEEG--GGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHH
T ss_pred --------CcCCc--cchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 22332 12233457899999987 79999999999999999999999999999999975
No 91
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.79 E-value=2.5e-07 Score=84.54 Aligned_cols=183 Identities=15% Similarity=0.154 Sum_probs=112.4
Q ss_pred CccEEEEEe-----CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc
Q 021527 62 KVALIPYIT-----AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP 136 (311)
Q Consensus 62 ~~~li~yi~-----~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~ 136 (311)
.+.++.++. ....+.+...+.++.+.+.|++.|.+. | | +++.+++
T Consensus 25 ~~~~~~~id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~-----~---~----------------------~~~~~~~ 74 (273)
T 2qjg_A 25 EKTVIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLH-----K---G----------------------IVRHGHR 74 (273)
T ss_dssp CCEEEEECCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEEC-----H---H----------------------HHHSCCC
T ss_pred CCEEEEEcccccccCCCcchhhHHHHHHHHHhcCCCEEEeC-----H---H----------------------HHHHHHH
Confidence 566777762 223345677889999999999999862 1 2 1222222
Q ss_pred --cCCCcEEEEecCcc-----hhccCHHHHHHHHHHcCCcEE--Ee--cCCChh----hHHHHHHHHHHcCCCeEEEeCC
Q 021527 137 --QMSCPIALFTYYNP-----ILKRGVDNFMSTVRDIGIRGL--VV--PDVPLE----ETESLQKEAMKNKIELVLFTTP 201 (311)
Q Consensus 137 --~~~iPiilm~Y~n~-----i~~~g~~~fi~~~~~aGadGv--ii--pDlp~e----e~~~~~~~~~~~gi~~I~lisp 201 (311)
..++|+++-.-... ........-++.+.+.|+|.| .+ ...+.+ +..++.+.|+++|+.++..+.+
T Consensus 75 ~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~ 154 (273)
T 2qjg_A 75 GYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYP 154 (273)
T ss_dssp SSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 13577765321111 100001235677889999998 33 234433 3567888899999987765521
Q ss_pred --------CChH--HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCC--HHH----H
Q 021527 202 --------TTPT--DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISK--PEH----V 265 (311)
Q Consensus 202 --------~t~~--eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst--~e~----v 265 (311)
.++. +...+.+. ..|..|+.... + . + .+.++++++.+++||++-+||++ .++ +
T Consensus 155 ~G~~l~~~~~~~~~~~~a~~a~-~~Gad~i~~~~--~-----~--~-~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~ 223 (273)
T 2qjg_A 155 RGKHIQNERDPELVAHAARLGA-ELGADIVKTSY--T-----G--D-IDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMI 223 (273)
T ss_dssp CSTTCSCTTCHHHHHHHHHHHH-HTTCSEEEECC--C-----S--S-HHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHH
T ss_pred CCcccCCCCCHhHHHHHHHHHH-HcCCCEEEECC--C-----C--C-HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 1221 22212222 24555553321 1 1 1 36788888878999999999984 677 7
Q ss_pred HHHHHcCCcEEEEhhHhhch
Q 021527 266 QQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 266 ~~v~~~GADGvIVGSaiv~~ 285 (311)
.++.+.|||||.|||+|.+.
T Consensus 224 ~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 224 KDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp HHHHHHTCSEEECCHHHHTS
T ss_pred HHHHHcCCcEEEeeHHhhCC
Confidence 77778999999999999873
No 92
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.78 E-value=3e-07 Score=88.00 Aligned_cols=125 Identities=20% Similarity=0.240 Sum_probs=82.2
Q ss_pred HHHHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEec-CC-ccCCCC
Q 021527 156 VDNFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSS-IG-VTGARA 232 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~-~G-~TG~~~ 232 (311)
.++.++.+.+.|+|.|.++ +.|. .++.+.+++.|+.++.-+ ++.++ .+...+..-.++.+... .| .+|...
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~---~~~i~~~~~~g~~v~~~v--~t~~~-a~~a~~~GaD~i~v~g~~~GGh~g~~~ 184 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD---REVIARLRRAGTLTLVTA--TTPEE-ARAVEAAGADAVIAQGVEAGGHQGTHR 184 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC---HHHHHHHHHTTCEEEEEE--SSHHH-HHHHHHTTCSEEEEECTTCSEECCCSS
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc---HHHHHHHHHCCCeEEEEC--CCHHH-HHHHHHcCCCEEEEeCCCcCCcCCCcc
Confidence 4677888999999999886 3332 234555667787544333 45443 43333322233333221 12 234321
Q ss_pred CC--C----chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 233 SI--S----GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 233 ~~--~----~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
.. + ....++++++++..++||++.+||.+++++.+++..|||||.|||+|...-
T Consensus 185 ~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~ 244 (369)
T 3bw2_A 185 DSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATD 244 (369)
T ss_dssp CCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTST
T ss_pred cccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 10 0 233578899988889999999999999999999999999999999998754
No 93
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.76 E-value=1.1e-07 Score=91.66 Aligned_cols=154 Identities=12% Similarity=0.110 Sum_probs=100.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEE--cCC------------CCCCCCChH--H-------H--HH--HHHHHHHcCCCHHHHH
Q 021527 76 LSTTAEALKLLDSCGSDIIEL--GVP------------YSDPLADGP--V-------I--QA--AATRSLARGTNFNAIL 128 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IEl--G~P------------fsDP~aDGp--~-------I--q~--a~~~Al~~G~~~~~~~ 128 (311)
.+...+.++.+.++|++.+++ ..| |+.|..-+. + + .. +....+..-++.+...
T Consensus 135 ~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~ 214 (380)
T 1p4c_A 135 REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNW 214 (380)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccH
Confidence 577888999999999999998 333 322311010 0 0 00 0000011111222224
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHH
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRM 208 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri 208 (311)
+.++++++.+++|+++-+.. ..+.++.+.++|+|+|++..-. | . .
T Consensus 215 ~~i~~i~~~~~~Pv~vkgv~-------t~e~a~~a~~aGad~I~vs~~g--------------g-~-------~------ 259 (380)
T 1p4c_A 215 EALRWLRDLWPHKLLVKGLL-------SAEDADRCIAEGADGVILSNHG--------------G-R-------Q------ 259 (380)
T ss_dssp HHHHHHHHHCCSEEEEEEEC-------CHHHHHHHHHTTCSEEEECCGG--------------G-T-------S------
T ss_pred HHHHHHHHhcCCCEEEEecC-------cHHHHHHHHHcCCCEEEEcCCC--------------C-C-------c------
Confidence 68889998899999986521 2457888999999999884210 0 0 0
Q ss_pred HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 209 KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
+ .+ | ++ ..+.+.++++.++.||++.+||++++|+.+++..|||+|.||++++..+.
T Consensus 260 ---------~------d~--~-----~~-~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~ 315 (380)
T 1p4c_A 260 ---------L------DC--A-----IS-PMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLA 315 (380)
T ss_dssp ---------C------TT--C-----CC-GGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHH
T ss_pred ---------C------CC--C-----cC-HHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHH
Confidence 0 01 1 11 13457777777778999999999999999999999999999999998663
No 94
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.76 E-value=8.1e-08 Score=90.68 Aligned_cols=185 Identities=18% Similarity=0.218 Sum_probs=108.3
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.++.++++|+++|..-.|- |...+. ..|...-.-.+.++++++.+++||..-.. .|..+-
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v-------~~d~~~-----~~G~arm~~p~~i~~I~~av~iPV~~K~r------ig~~~e 88 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERV-------PADIRA-----AGGVARMSDPALIEEIMDAVSIPVMAKCR------IGHTTE 88 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSC-------HHHHC-------CCCCCCCCHHHHHHHHHHCSSCEEEEEE------TTCHHH
T ss_pred HHHHHHHHHcCCCEEEecCCc-------cccccC-----CcchhhcCCHHHHHHHHHhcCCCeEEEEe------ecchHH
Confidence 689999999999999663222 111111 13321111145788888889999988643 343445
Q ss_pred HHHHHHcCCcEEEec------CC-----------Ch----hhHHHHHHHHHHcCCCeEEEeC------------------
Q 021527 160 MSTVRDIGIRGLVVP------DV-----------PL----EETESLQKEAMKNKIELVLFTT------------------ 200 (311)
Q Consensus 160 i~~~~~aGadGviip------Dl-----------p~----ee~~~~~~~~~~~gi~~I~lis------------------ 200 (311)
.+.+.+.|+|-+... |+ |+ .+..+....+ ..|.+.|-.-.
T Consensus 89 ~qilea~GaD~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~ 167 (330)
T 2yzr_A 89 ALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMN 167 (330)
T ss_dssp HHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHH
Confidence 666777999998763 22 11 0233444444 55777664311
Q ss_pred -------CCChHHHHHHHHHhCCceEEE--E----ecCC------------ccCCCCCCCchHHHHHHHHhhcCCCcE--
Q 021527 201 -------PTTPTDRMKAIVEASEGFVYL--V----SSIG------------VTGARASISGHVQTLLREIKESSTKPV-- 253 (311)
Q Consensus 201 -------p~t~~eri~~i~~~a~gfiY~--v----s~~G------------~TG~~~~~~~~~~~~l~~vk~~~~~Pv-- 253 (311)
..+ ++.+...+. ..+..|+ + +..| .|.++...+....++++++++..++||
T Consensus 168 ~~~~~~s~~~-~~El~~~A~-~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~ 245 (330)
T 2yzr_A 168 EAIAQLQRMT-DEEVYGVAK-FYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVN 245 (330)
T ss_dssp HHHHHHTTSC-HHHHHHHHH-HHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEE
T ss_pred HHHHHhccCC-HHHHHHHHH-HcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEE
Confidence 001 222211111 1233330 0 0012 122221111234488999988778998
Q ss_pred EEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 254 AVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 254 ~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+.-+||+|++|+.++.+.|||||.|||++.+.
T Consensus 246 VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a 277 (330)
T 2yzr_A 246 FAAGGVATPADAALMMQLGSDGVFVGSGIFKS 277 (330)
T ss_dssp EECSCCCSHHHHHHHHHTTCSCEEESHHHHTS
T ss_pred EEECCCCCHHHHHHHHHcCcCEEeeHHHHhcC
Confidence 58999999999999999999999999999973
No 95
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=98.75 E-value=1.5e-07 Score=82.88 Aligned_cols=159 Identities=14% Similarity=0.159 Sum_probs=104.1
Q ss_pred HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCH-HHH
Q 021527 81 EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGV-DNF 159 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~-~~f 159 (311)
+.++...+..++.+.+. +| ++.++-++++++++..+.+++-....+.+ +. +.-
T Consensus 20 ~~l~~al~s~~~~ifll--------~g---------------~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl---s~d~~a 73 (192)
T 3kts_A 20 KDMEKILELDLTYMVML--------ET---------------HVAQLKALVKYAQAGGKKVLLHADLVNGL---KNDDYA 73 (192)
T ss_dssp HHHHHHTTSSCCEEEEC--------SE---------------ETTTHHHHHHHHHHTTCEEEEEGGGEETC---CCSHHH
T ss_pred HHHHHHHcCCCCEEEEe--------cC---------------cHHHHHHHHHHHHHcCCeEEEecCchhcc---CCcHHH
Confidence 56677777788998885 22 22234467778887777554432222211 11 223
Q ss_pred HHHHHH-cCCcEEEecCCChhhHHHHHHHHHHcCCCeEE--EeCCCChHHH-HHHHHHhCCceEEEEecCCccCCCCCCC
Q 021527 160 MSTVRD-IGIRGLVVPDVPLEETESLQKEAMKNKIELVL--FTTPTTPTDR-MKAIVEASEGFVYLVSSIGVTGARASIS 235 (311)
Q Consensus 160 i~~~~~-aGadGviipDlp~ee~~~~~~~~~~~gi~~I~--lisp~t~~er-i~~i~~~a~gfiY~vs~~G~TG~~~~~~ 235 (311)
++.+++ .++||+|=. .....+.+++.|+..|+ |+-.+..-++ ++.+.+....++-+.+ | ..
T Consensus 74 i~fL~~~~~pdGIIsT------k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLP--G-------i~ 138 (192)
T 3kts_A 74 IDFLCTEICPDGIIST------RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLP--G-------II 138 (192)
T ss_dssp HHHHHHTTCCSEEEES------CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEEC--T-------TC
T ss_pred HHHHHhCCCCCEEEeC------cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECC--c-------hh
Confidence 333334 589998655 23467788999998775 3333333233 4444444567765553 2 12
Q ss_pred chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhh
Q 021527 236 GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 236 ~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv 283 (311)
.+.++++++.+++|+++|++|++.|++.+++++|||+|..|+.-+
T Consensus 139 ---p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 139 ---PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp ---HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred ---HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 268999999999999999999999999999999999999987643
No 96
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.75 E-value=2.4e-07 Score=88.13 Aligned_cols=152 Identities=14% Similarity=0.163 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCChHHHHHHHHHHHHcCCCHH----HHHHHHHHhhccCCCcE
Q 021527 78 TTAEALKLLDSCGSDIIELGV-----------PYSDPLADGPVIQAAATRSLARGTNFN----AILSMLKEVVPQMSCPI 142 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aDGp~Iq~a~~~Al~~G~~~~----~~~~~i~~ir~~~~iPi 142 (311)
.+.+.++.+.++|.|.|||-. |.++---| +.|-+++ -++++++.+|+.++.||
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D------------~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQD------------EYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCS------------TTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCC------------cccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 688888999999999999941 44333233 1222333 34788888898889998
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
.+-.-.+... + + ..+.++..++.+.+.+.|++.+-+....+... . .
T Consensus 213 ~vRls~~~~~--------~-------~-----g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~-~---- 258 (340)
T 3gr7_A 213 FVRISASDYH--------P-------D-----GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPA---------R-M---- 258 (340)
T ss_dssp EEEEESCCCS--------T-------T-----SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCC---------C-C----
T ss_pred EEEecccccc--------C-------C-----CCCHHHHHHHHHHHHHcCCCEEEEecCCccCC---------C-C----
Confidence 8854222111 0 1 12456677777777788887776654322100 0 0
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
..+ +....++++++|+.+++||++++||++++++.++++.| ||.|.+|++++.
T Consensus 259 ----~~~-----~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 259 ----NVY-----PGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp ----CCC-----TTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred ----CCC-----ccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 001 11124678999998999999999999999999999999 999999999875
No 97
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.74 E-value=5.7e-07 Score=84.81 Aligned_cols=161 Identities=14% Similarity=0.167 Sum_probs=99.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC---------CCcEEEEe
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM---------SCPIALFT 146 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~---------~iPiilm~ 146 (311)
.+.+.+.++.+.+ |+|+||+.+ +.|...|. +. +.+.+...++++.+|+.+ ++||++-.
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~--~sP~~~g~-------~~---~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi 218 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINI--SSPNTPGL-------RT---LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI 218 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEEC--CCSSSTTG-------GG---GGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHHHhc-cCCEEEEEc--cCCCCCCc-------cc---ccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEe
Confidence 4677788887766 999999974 45654441 11 223555667777777665 79999863
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCC
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIG 226 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G 226 (311)
-.+ +..-...++++.+.++|+|+|++..-.... .++. .+ .....+ -|
T Consensus 219 ~~~-~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~----------~~~~-----~~-----------~~~~~~------gg 265 (336)
T 1f76_A 219 APD-LSEEELIQVADSLVRHNIDGVIATNTTLDR----------SLVQ-----GM-----------KNCDQT------GG 265 (336)
T ss_dssp CSC-CCHHHHHHHHHHHHHTTCSEEEECCCBCCC----------TTST-----TS-----------TTTTCS------SE
T ss_pred cCC-CCHHHHHHHHHHHHHcCCcEEEEeCCcccc----------cccc-----cc-----------cccccC------CC
Confidence 211 000012445667777888887776321100 0000 00 000000 01
Q ss_pred ccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 227 VTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 227 ~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+|. ...+...+.++++++.+ ++||+..+||++++++.+++..|||+|-+|++++.
T Consensus 266 ~~g~--~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 266 LSGR--PLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp EEEG--GGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cCCc--hhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 1221 11122346788898877 89999999999999999999999999999999875
No 98
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.74 E-value=3.3e-08 Score=94.76 Aligned_cols=179 Identities=17% Similarity=0.143 Sum_probs=108.0
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHH---HCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLD---SCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~---~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
.++.=|. |. +.+++.+.++.++ +.|+|+|||.+-. |...| .++| +.+.+.+.++++.+++.+++
T Consensus 128 pvivsI~-G~-~~~d~~~~a~~l~~~~~~g~d~ielNisC--Pn~~g-------g~~l--~~~~e~~~~il~av~~~~~~ 194 (354)
T 4ef8_A 128 PLFLSMS-GL-SMRENVEMCKRLAAVATEKGVILELNLSC--PNVPG-------KPQV--AYDFDAMRQCLTAVSEVYPH 194 (354)
T ss_dssp CEEEEEC-CS-SHHHHHHHHHHHHHHHHHHCCEEEEECSS--CCSTT-------SCCG--GGSHHHHHHHHHHHHHHCCS
T ss_pred cEEEEec-cC-CHHHHHHHHHHHhhhhhcCCCEEEEeCCC--CCCCC-------chhh--ccCHHHHHHHHHHHHHhhCC
Confidence 4444443 32 4578888888888 6899999997433 32222 0111 23456677888899988999
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcC-CcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aG-adGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
||.+-.-.+. ....+.++++.+.++| +|+|++..-. . .|+ .+...+..-+. ....++
T Consensus 195 PV~vKi~p~~-d~~~~~~~a~~~~~~Gg~d~I~~~NT~-~-----------~g~----~idi~~~~~~~----~~~~~~- 252 (354)
T 4ef8_A 195 SFGVKMPPYF-DFAHFDAAAEILNEFPKVQFITCINSI-G-----------NGL----VIDAETESVVI----KPKQGF- 252 (354)
T ss_dssp CEEEEECCCC-SHHHHHHHHHHHHTCTTEEEEEECCCE-E-----------EEE----CEETTTTEESC----SGGGGE-
T ss_pred CeEEEecCCC-CHHHHHHHHHHHHhCCCccEEEEeccc-C-----------cce----eeeccCCcccc----cccccc-
Confidence 9998753321 0111234455555776 8887664210 0 000 01100000000 000111
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
-|.+|. .+.+-..+++.++++.. ++||+..+||.|++++.+.+..|||+|.||++++.
T Consensus 253 -----gGlSG~--~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 253 -----GGLGGR--YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp -----EEEEGG--GGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred -----CCCCCC--CCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH
Confidence 123332 23333457899998875 79999999999999999999999999999999986
No 99
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=98.73 E-value=4.1e-08 Score=92.84 Aligned_cols=181 Identities=14% Similarity=0.106 Sum_probs=116.9
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCC--ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe-cCcch
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLA--DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT-YYNPI 151 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~a--DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~-Y~n~i 151 (311)
+.+..+++++.|+++|+|.||+|.|- .|-+ |+.. |- .. .+ .++++++..++++..|. ..| .
T Consensus 22 ~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~-~~---------~~-~e---~l~~i~~~~~~~~~~L~r~~~-~ 85 (320)
T 3dxi_A 22 NSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKF-GY---------TP-VS---VLKHLRNISTKKIAIMLNEKN-T 85 (320)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHH-HH---------CC-HH---HHHHHHHHCCSEEEEEEEGGG-C
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeccc-CCcccccccc-cc---------Ch-HH---HHHHHhhccCCeEEEEecCCC-C
Confidence 35778999999999999999999884 5633 3211 10 11 23 33444433567777765 334 1
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCCh--hhHHHHHHHHHHcCCCeEEEe---CCCChH-HHHHHHHHhCCceEEEEecC
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPL--EETESLQKEAMKNKIELVLFT---TPTTPT-DRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~--ee~~~~~~~~~~~gi~~I~li---sp~t~~-eri~~i~~~a~gfiY~vs~~ 225 (311)
+..++++.. .+.++|+|.+.+.|-+. |+..+..+.++++|+++.+.+ +|.+++ .++..+.+...|. |.++..
T Consensus 86 ~~~dv~~~~-~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~G~-~~i~l~ 163 (320)
T 3dxi_A 86 TPEDLNHLL-LPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIA-DLFCMV 163 (320)
T ss_dssp CGGGHHHHH-GGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTC-SEEEEE
T ss_pred ChhhHHHHH-HhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHhhCCC-CEEEEC
Confidence 122333322 22458999999987654 667778888999999877665 454443 3454444434452 334444
Q ss_pred CccCCCCCCCchHHHHHHHHhhcCCCcEEEe----eCCCCHHHHHHHHHcCCcEE
Q 021527 226 GVTGARASISGHVQTLLREIKESSTKPVAVG----FGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG----fGIst~e~v~~v~~~GADGv 276 (311)
.++|.. .|..+.++++.+|+.+++|+-+- +|...+ +....+++|||.|
T Consensus 164 Dt~G~~--~P~~~~~lv~~l~~~~~~~i~~H~Hn~~G~a~a-n~laA~~aGa~~v 215 (320)
T 3dxi_A 164 DSFGGI--TPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLI-NSITAIDDGIDFI 215 (320)
T ss_dssp CTTSCC--CHHHHHHHHHHHHHHCCSCEEEECBCTTSCHHH-HHHHHHHTTCSEE
T ss_pred cccCCC--CHHHHHHHHHHHHHhCCCeEEEEeCCCCccHHH-HHHHHHHhCCCEE
Confidence 455652 46678899999999888999887 788754 4556677999966
No 100
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.72 E-value=9.4e-07 Score=83.77 Aligned_cols=154 Identities=14% Similarity=0.212 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcE
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPI 142 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPi 142 (311)
+.+.+.++.+.++|.|+|||-. |.++---| |. +.+ +.+-.+++++.+|+.++.||
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs-len----------r~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS-PEN----------RYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHH----------HHHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc-hhh----------hHHHHHHHHHHHHHHcCCcE
Confidence 4688889999999999999942 54432223 21 111 12345788888888889998
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
.+-...+..... ....++..++.+.+.+.|++.+-+...+.. . ..+
T Consensus 213 ~vris~~~~~~~--------------------g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~--------~--~~~---- 258 (338)
T 1z41_A 213 FVRVSASDYTDK--------------------GLDIADHIGFAKWMKEQGVDLIDCSSGALV--------H--ADI---- 258 (338)
T ss_dssp EEEEECCCCSTT--------------------SCCHHHHHHHHHHHHHTTCCEEEEECCCSS--------C--CCC----
T ss_pred EEEecCcccCCC--------------------CCCHHHHHHHHHHHHHcCCCEEEEecCccc--------c--CCC----
Confidence 886422211110 123455666666667777776665443211 0 000
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
..+ +....++++++|+.+++||++++||++++++.++++.| ||+|.+|++++.
T Consensus 259 ----~~~-----~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 259 ----NVF-----PGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp ----CCC-----TTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred ----CCC-----ccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 001 11124678889998899999999999999999999999 999999999976
No 101
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.72 E-value=1.2e-06 Score=84.86 Aligned_cols=157 Identities=20% Similarity=0.205 Sum_probs=98.1
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcC--CCC------------CCCC------ChHHH--H-----HHH---HHHHHcCC
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGV--PYS------------DPLA------DGPVI--Q-----AAA---TRSLARGT 122 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~--Pfs------------DP~a------DGp~I--q-----~a~---~~Al~~G~ 122 (311)
..|.+.+.+.++..+++|++.|-+.+ |.. -|.. .+... + ... ..-+..-.
T Consensus 156 ~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~ 235 (392)
T 2nzl_A 156 YKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAI 235 (392)
T ss_dssp BSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHB
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcC
Confidence 45667888999999999999998843 331 1210 00000 0 000 00011000
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC
Q 021527 123 NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT 202 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~ 202 (311)
+.+...+.++++|+.+++||++-+..+ .+..+.+.++|+|+|++..-. |
T Consensus 236 d~~~~~~~i~~lr~~~~~PvivKgv~~-------~e~A~~a~~aGad~I~vs~~g--------------g---------- 284 (392)
T 2nzl_A 236 DPSISWEDIKWLRRLTSLPIVAKGILR-------GDDAREAVKHGLNGILVSNHG--------------A---------- 284 (392)
T ss_dssp CTTCCHHHHHHHC--CCSCEEEEEECC-------HHHHHHHHHTTCCEEEECCGG--------------G----------
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEecCC-------HHHHHHHHHcCCCEEEeCCCC--------------C----------
Confidence 111124578899998999999975421 456888899999999884211 0
Q ss_pred ChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 203 TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 203 t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
|. . ..| ++ ..+.+.++++.+ ++||++.+||++++|+.+++..|||+|.||+
T Consensus 285 ----r~---------------~--~~g-----~~-~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 285 ----RQ---------------L--DGV-----PA-TIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp ----TS---------------S--TTC-----CC-HHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred ----Cc---------------C--CCC-----cC-hHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECH
Confidence 00 0 001 11 235566776654 5999999999999999999999999999999
Q ss_pred Hhhchhh
Q 021527 281 AMVKLLG 287 (311)
Q Consensus 281 aiv~~~~ 287 (311)
+++..+.
T Consensus 338 ~~l~~~~ 344 (392)
T 2nzl_A 338 PIVWGLA 344 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 102
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=98.71 E-value=3.3e-08 Score=89.87 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=103.4
Q ss_pred CCCCChhhHHHHHHHHHHCC--CCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 71 AGDPDLSTTAEALKLLDSCG--SDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 71 ~G~P~~~~~~e~~~~L~~~G--aD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+..++++. .++.+++.| +|++++|+++ . +.. ..+.++.+|+. +.++++..-.
T Consensus 21 lD~~~l~~---~~~~~~~~~~~v~~~Kv~~d~---------~-------~~~------G~~~v~~lr~~-~~~v~lD~kl 74 (245)
T 1eix_A 21 LDYHNRDD---ALAFVDKIDPRDCRLKVGKEM---------F-------TLF------GPQFVRELQQR-GFDIFLDLKF 74 (245)
T ss_dssp ECCSSHHH---HHHHHTTSCTTTCEEEEEHHH---------H-------HHH------HHHHHHHHHHT-TCCEEEEEEE
T ss_pred ECCCCHHH---HHHHHHHhCccCcEEEEcHHH---------H-------HHh------CHHHHHHHHHC-CCcEEEEeec
Confidence 33445554 555555566 8999998665 1 111 24577777765 4455555433
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCC-Ce-EEEeCCCCh--HHHHHHHHHhCC--ceEEE
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKI-EL-VLFTTPTTP--TDRMKAIVEASE--GFVYL 221 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi-~~-I~lisp~t~--~eri~~i~~~a~--gfiY~ 221 (311)
..+-.+ ..++++.+.++|+|.+.++=..-.+ ...+.+.++++|. .. ++.+++.|+ .+.++.+.-... ..+..
T Consensus 75 ~Dip~t-~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ 153 (245)
T 1eix_A 75 HDIPNT-AAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAER 153 (245)
T ss_dssp CSCHHH-HHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHH
T ss_pred cccHHH-HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHH
Confidence 222111 2357888899999999997332233 5567778888887 43 444554443 233322100000 00100
Q ss_pred Eec----CCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHH-----------HHHHHHHcCCcEEEEhhHhhc
Q 021527 222 VSS----IGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPE-----------HVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~----~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e-----------~v~~v~~~GADGvIVGSaiv~ 284 (311)
++. .|..| +-.+..+ ++++|+.. +.++.|-.||+ ++ ++.++.++|||.+|||+++.+
T Consensus 154 ma~~~~~~G~~g----~V~~~~e-i~~lr~~~~~~~i~v~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 226 (245)
T 1eix_A 154 LAALTQKCGLDG----VVCSAQE-AVRFKQVFGQEFKLVTPGIR-PQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQ 226 (245)
T ss_dssp HHHHHHHTTCSE----EECCGGG-HHHHHHHHCSSSEEEECCBC-CTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHcCCCe----EEeCHHH-HHHHHHhcCCCCEEEECCcC-CCCCCccchhccCCHHHHHHcCCCEEEECHHHcC
Confidence 111 12111 1111124 66666654 46899999997 46 688899999999999999997
No 103
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.71 E-value=1.7e-07 Score=93.80 Aligned_cols=139 Identities=18% Similarity=0.170 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
...+.++.|.++|+|.|+++.. +| ....+++.++++++.. ++|+++.... .
T Consensus 256 d~~era~aLveaGvd~I~Id~a------~g---------------~~~~v~~~i~~i~~~~~~~~vi~g~v~-------t 307 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA------HG---------------HSQGVIDKVKEVRAKYPSLNIIAGNVA-------T 307 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS------CT---------------TSHHHHHHHHHHHHHCTTSEEEEEEEC-------S
T ss_pred chHHHHHHHHhhccceEEeccc------cc---------------chhhhhhHHHHHHHhCCCceEEeeeec-------c
Confidence 4678899999999999999833 22 1134567889998875 5788864322 2
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+..+.+.++|+|++.+. ..... ..++ |. .+|. +.+.
T Consensus 308 ~e~a~~~~~aGad~i~vg-~g~gs--------------------i~~~--~~------------------~~g~--g~p~ 344 (511)
T 3usb_A 308 AEATKALIEAGANVVKVG-IGPGS--------------------ICTT--RV------------------VAGV--GVPQ 344 (511)
T ss_dssp HHHHHHHHHHTCSEEEEC-SSCST--------------------TCCH--HH------------------HHCC--CCCH
T ss_pred HHHHHHHHHhCCCEEEEC-CCCcc--------------------cccc--cc------------------ccCC--CCCc
Confidence 457888999999998752 21110 0111 11 0111 1111
Q ss_pred -hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 237 -HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 237 -~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.....+.++.+..++||++.+||++++++.+++.+|||+|.+||+|....+
T Consensus 345 ~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 345 LTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp HHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCcc
Confidence 111123333334579999999999999999999999999999999977664
No 104
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.70 E-value=1.9e-08 Score=88.98 Aligned_cols=175 Identities=12% Similarity=0.073 Sum_probs=103.5
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+.+..+++++..+.++.+.. -+.++++| ||-+ +..|. +.++++|+..+.++++....
T Consensus 4 la~D~~~l~~~~~~~~~~~~-~~~~~kv~--------~~~f--------~~~G~------~~i~~lr~~~~~~v~~D~kl 60 (208)
T 2czd_A 4 LALDVYEGERAIKIAKSVKD-YISMIKVN--------WPLI--------LGSGV------DIIRRLKEETGVEIIADLKL 60 (208)
T ss_dssp EECCCCSHHHHHHHHHHHGG-GCSEEEEE--------HHHH--------HHHCT------THHHHHHHHHCCEEEEEEEE
T ss_pred EEecCCCHHHHHHHHHHhcc-cccEEEec--------HHHH--------HhhCH------HHHHHHHHcCCCEEEEEeee
Confidence 45566777777777766532 25566676 4433 22343 35666776535566666544
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHH--------HHHHHH--hCCce
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDR--------MKAIVE--ASEGF 218 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~er--------i~~i~~--~a~gf 218 (311)
.++..+ .+++++.+.++|+|.+.++=..-. ...+.+++.+ -+.+.. .|+.+. ...++. ...||
T Consensus 61 ~DI~~t-~~~~v~~~~~~Gad~vtvh~~~g~---~~i~~~~~~~--gv~vl~-~t~~~~~~~~~~~~v~~~~~~a~~~G~ 133 (208)
T 2czd_A 61 ADIPNT-NRLIARKVFGAGADYVIVHTFVGR---DSVMAVKELG--EIIMVV-EMSHPGALEFINPLTDRFIEVANEIEP 133 (208)
T ss_dssp CSCHHH-HHHHHHHHHHTTCSEEEEESTTCH---HHHHHHHTTS--EEEEEC-CCCSGGGGTTTGGGHHHHHHHHHHHCC
T ss_pred CchHHH-HHHHHHHHHhcCCCEEEEeccCCH---HHHHHHHHhC--CcEEEE-ecCCcchhhHHHHHHHHHHHHHHHhCC
Confidence 433322 367889999999999988632222 2355566665 333332 232211 111112 12355
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCC-CcEEEeeCCCCHH--HHHHHHHcCCcEEEEhhHhhch
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESST-KPVAVGFGISKPE--HVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~-~Pv~vGfGIst~e--~v~~v~~~GADGvIVGSaiv~~ 285 (311)
...+. +.+ ..+.++++|+..+ .++++-+||+. + ++.++.+.|||++||||++.+.
T Consensus 134 ~G~~~--~~~---------~~~~i~~lr~~~~~~~~iv~gGI~~-~g~~~~~~~~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 134 FGVIA--PGT---------RPERIGYIRDRLKEGIKILAPGIGA-QGGKAKDAVKAGADYIIVGRAIYNA 191 (208)
T ss_dssp SEEEC--CCS---------STHHHHHHHHHSCTTCEEEECCCCS-STTHHHHHHHHTCSEEEECHHHHTS
T ss_pred cEEEE--CCC---------ChHHHHHHHHhCCCCeEEEECCCCC-CCCCHHHHHHcCCCEEEEChHHhcC
Confidence 44431 111 1244677777664 36779999984 4 7999999999999999999973
No 105
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.69 E-value=1.3e-07 Score=90.24 Aligned_cols=177 Identities=17% Similarity=0.185 Sum_probs=109.8
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCC-EEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSD-IIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD-~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
..++.=|. | -+.+++.+.++.+++.|+| +|||.+ |-|...|- ++| +.+.+.+.++++.+|+.+++|
T Consensus 129 ~pvivsI~-g-~~~~d~~~~a~~l~~~g~~d~ielNi--sCPn~~G~-------~~l--~~~~e~l~~il~av~~~~~~P 195 (345)
T 3oix_A 129 KNHFLSLV-G-MSPEETHTILXMVEASKYQGLVELNL--SCPNVPGX-------PQI--AYDFETTDQILSEVFTYFTKP 195 (345)
T ss_dssp CCCEEEEC-C-SSHHHHHHHHHHHHHSSCCSEEEEEC--SCCCSTTC-------CCG--GGCHHHHHHHHHHHTTTCCSC
T ss_pred CCEEEEec-C-CCHHHHHHHHHHHhccCCCcEEEEec--CCCCcCCc-------hhh--cCCHHHHHHHHHHHHHHhCCC
Confidence 34554443 3 4568999999999999987 999974 33433230 122 345567788999999989999
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
|.+-.-.| ....++.+.+.++|++++...... +.+..-+.+...++. + ....++
T Consensus 196 V~vKi~p~----~~~~~~a~~~~~aga~~i~~int~-------------nt~g~~~~i~~~~~~-----~-~~~~~~--- 249 (345)
T 3oix_A 196 LGIKLPPY----FDIVHFDQAAAIFNXYPLTFVNCI-------------NSIGNGLVIEDETVV-----I-XPKNGF--- 249 (345)
T ss_dssp EEEEECCC----CCHHHHHHHHHHHTTSCCSEEEEC-------------CCEEEEECEETTEES-----C-SGGGGE---
T ss_pred eEEEECCC----CCHHHHHHHHHHhCCCceEEEEee-------------cccccceeeccCccc-----c-cccccc---
Confidence 99875433 245667777777777664211000 000000001100000 0 000010
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv 283 (311)
-|.+|. .+.+-..+++.++++.+ ++||+..+||.|++++.+.+..|||+|.||+++.
T Consensus 250 ---gGlSG~--ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~ 308 (345)
T 3oix_A 250 ---GGIGGD--YVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALH 308 (345)
T ss_dssp ---EEEEEG--GGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred ---CCcCCc--cccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHH
Confidence 023332 22233357899999988 7999999999999999999999999999999954
No 106
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.68 E-value=4.3e-07 Score=88.31 Aligned_cols=135 Identities=22% Similarity=0.280 Sum_probs=92.0
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.++.+.++|+|+|+++.-+.+| +.+.+.++++++.+++|+++-.- ...+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~---------------------~~~~e~I~~ik~~~~i~Vi~g~V-------~t~e~ 197 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHS---------------------LNIIRTLKEIKSKMNIDVIVGNV-------VTEEA 197 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSB---------------------HHHHHHHHHHHTTCCCEEEEEEE-------CSHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCc---------------------ccHHHHHHHHHhcCCCeEEEeec-------CCHHH
Confidence 588999999999999997555433 23457888998888889886321 12467
Q ss_pred HHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHH
Q 021527 160 MSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQ 239 (311)
Q Consensus 160 i~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~ 239 (311)
++.+.++|+|+|++. . +. | .+. ++ | . .+|. +.+ ..
T Consensus 198 A~~a~~aGAD~I~vG-~--g~-----------G--s~~----~t---r-----~-------------~~g~--g~p--~~ 232 (400)
T 3ffs_A 198 TKELIENGADGIKVG-I--GP-----------G--SIC----TT---R-----I-------------VAGV--GVP--QI 232 (400)
T ss_dssp HHHHHHTTCSEEEEC-C------------------------------------C-------------CSCB--CCC--HH
T ss_pred HHHHHHcCCCEEEEe-C--CC-----------C--cCc----cc---c-----c-------------cccc--chh--HH
Confidence 788889999998873 1 10 1 000 00 0 0 0111 011 12
Q ss_pred HHHHHHhh---cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 240 TLLREIKE---SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 240 ~~l~~vk~---~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
..+.++++ ..++||++.+||.+++++.+++.+|||+|.+||+|...-+
T Consensus 233 ~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 233 TAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 283 (400)
T ss_dssp HHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTT
T ss_pred HHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCC
Confidence 34444443 3589999999999999999999999999999999998765
No 107
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=98.67 E-value=4.5e-07 Score=81.67 Aligned_cols=150 Identities=18% Similarity=0.255 Sum_probs=98.4
Q ss_pred HHHHhhccCCCcEEEEe-cC--cchhccCHHHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHcCCCeEEEeCCC
Q 021527 130 MLKEVVPQMSCPIALFT-YY--NPILKRGVDNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKNKIELVLFTTPT 202 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~-Y~--n~i~~~g~~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~gi~~I~lisp~ 202 (311)
.+..+++.+++|+.--- ++ +.-|.. +--+..+++.|+|.+++.. +.+.|..+..+.+.++|+++++-+..+
T Consensus 50 ~L~~v~~~~~i~v~aQdv~~~~~Ga~TG--eis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~ 127 (225)
T 1hg3_A 50 DLRMIAESVEIPVFAQHIDPIKPGSHTG--HVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNP 127 (225)
T ss_dssp HHHHHHHSCSSCBEESCCCSCCSBSCTT--CCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred HHHHHHHhcCCceeeeeCCcccCCCccC--cccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45555666678865521 11 111111 1135678999999999975 666788888999999999987766532
Q ss_pred ChHHHHHHHHHhCCceEEEEec--CCccCCC-CCCCch-HHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEE
Q 021527 203 TPTDRMKAIVEASEGFVYLVSS--IGVTGAR-ASISGH-VQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 203 t~~eri~~i~~~a~gfiY~vs~--~G~TG~~-~~~~~~-~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvI 277 (311)
.++ +.+.......|-+-.+ .| ||.. ....++ ..+..+.+|+.. +++++.|+||++++++..+...|+||+-
T Consensus 128 -~e~--~~~~~~~~~iIayep~waiG-tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~L 203 (225)
T 1hg3_A 128 -AVS--AAVAALNPDYVAVEPPELIG-TGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVL 203 (225)
T ss_dssp -HHH--HHHHTTCCSEEEECCTTTTT-TSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred -HHH--HHHhcCCCCEEEEeChhhhc-cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEE
Confidence 222 2232333334444332 33 5611 122333 666666666654 6899999999999999999999999999
Q ss_pred EhhHhhch
Q 021527 278 VGSAMVKL 285 (311)
Q Consensus 278 VGSaiv~~ 285 (311)
||+++++.
T Consensus 204 VG~a~l~a 211 (225)
T 1hg3_A 204 LASGVTKA 211 (225)
T ss_dssp ESHHHHTC
T ss_pred eCHHHHCC
Confidence 99999984
No 108
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.67 E-value=1e-06 Score=84.60 Aligned_cols=155 Identities=19% Similarity=0.169 Sum_probs=98.2
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcC--CCC------------CCCCC--hHHHHHHHHH-HHHcCCCH----------HHH
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGV--PYS------------DPLAD--GPVIQAAATR-SLARGTNF----------NAI 127 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~--Pfs------------DP~aD--Gp~Iq~a~~~-Al~~G~~~----------~~~ 127 (311)
|.+...+.++.++++|++.|++.+ |+. .|..- +-+++..... +...|..+ ...
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~ 213 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLS 213 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCC
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccch
Confidence 446778999999999999999953 322 23211 0111100000 00011111 112
Q ss_pred HHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHH
Q 021527 128 LSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDR 207 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~er 207 (311)
.+.++++++.+++|+++-+-.+ .+.++.+.++|+|+|.+..-. | |
T Consensus 214 ~~~i~~l~~~~~~pv~vK~~~~-------~e~a~~a~~~Gad~I~vs~~g--------------g--------------r 258 (370)
T 1gox_A 214 WKDVAWLQTITSLPILVKGVIT-------AEDARLAVQHGAAGIIVSNHG--------------A--------------R 258 (370)
T ss_dssp HHHHHHHHHHCCSCEEEECCCS-------HHHHHHHHHTTCSEEEECCGG--------------G--------------T
T ss_pred HHHHHHHHHHhCCCEEEEecCC-------HHHHHHHHHcCCCEEEECCCC--------------C--------------c
Confidence 3568888888899998844221 356788889999998874210 0 0
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
. ..+ | ++ ..+.+.++++.+ ++||++.+||++++|+.+++..|||+|.||++++..
T Consensus 259 ~---------------~~~--~-----~~-~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 259 Q---------------LDY--V-----PA-TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp S---------------STT--C-----CC-HHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred c---------------CCC--c-----cc-HHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHH
Confidence 0 001 1 12 345677777766 799999999999999999999999999999999986
Q ss_pred hh
Q 021527 286 LG 287 (311)
Q Consensus 286 ~~ 287 (311)
+.
T Consensus 316 ~~ 317 (370)
T 1gox_A 316 LA 317 (370)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 109
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.66 E-value=1.3e-06 Score=80.31 Aligned_cols=185 Identities=18% Similarity=0.204 Sum_probs=116.2
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe-----
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT----- 146 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~----- 146 (311)
+.|+.+...+..+...+.|++.+-+- | | +++..+ -.++++++-.
T Consensus 36 ~~~~~~di~~~~~~a~~~~~~av~v~-----~---~----------------------~v~~~~-~~~~~liv~~~~~~~ 84 (263)
T 1w8s_A 36 DNPDSADPEYILRLARDAGFDGVVFQ-----R---G----------------------IAEKYY-DGSVPLILKLNGKTT 84 (263)
T ss_dssp SSGGGGCHHHHHHHHHHHTCSEEEEC-----H---H----------------------HHHHHC-CSSSCEEEECEECCT
T ss_pred cCcchhhHHHHHHHHHhhCCCEEEEC-----H---H----------------------HHHHhh-cCCCcEEEEEeCCCC
Confidence 44577888999999999999999884 1 1 232322 2345655421
Q ss_pred --cCcchhccCHHHHHHHHHHcCCcEEEec----CCCh----hhHHHHHHHHHHcCCCeEEEeCCC--------ChHHHH
Q 021527 147 --YYNPILKRGVDNFMSTVRDIGIRGLVVP----DVPL----EETESLQKEAMKNKIELVLFTTPT--------TPTDRM 208 (311)
Q Consensus 147 --Y~n~i~~~g~~~fi~~~~~aGadGviip----Dlp~----ee~~~~~~~~~~~gi~~I~lisp~--------t~~eri 208 (311)
..++-. ....-++.+.+.|+|.+-+. +... ++..++++.|+++|+.+|....+. ++ +.+
T Consensus 85 ~~g~~~~~--~~~~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~-~~i 161 (263)
T 1w8s_A 85 LYNGEPVS--VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAP-EIV 161 (263)
T ss_dssp TCCSSCCC--EESSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCH-HHH
T ss_pred cCCCCccc--hHHHHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCH-HHH
Confidence 111111 01124677889999998663 2222 346678888999999987765551 33 333
Q ss_pred HHHHH--hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCC-cEEEeeCCC--CHHHHHHHH----HcCCcEEEEh
Q 021527 209 KAIVE--ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTK-PVAVGFGIS--KPEHVQQVA----GWGADGVIVG 279 (311)
Q Consensus 209 ~~i~~--~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~-Pv~vGfGIs--t~e~v~~v~----~~GADGvIVG 279 (311)
...++ ...|..|+-+. ++| . .+.++++++.+++ ||.+-+||+ +.+++.+.. +.||+|+.+|
T Consensus 162 ~~a~~~a~~~GAD~vkt~--~~~-------~-~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 162 AYAARIALELGADAMKIK--YTG-------D-PKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCS-------S-HHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHcCCCEEEEc--CCC-------C-HHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 22222 23466677432 222 1 2568888877777 999999999 777665555 9999999999
Q ss_pred hHhhchhhhcCCchhHHHHHHHHHH
Q 021527 280 SAMVKLLGEAQSPEEGLKELEKFAK 304 (311)
Q Consensus 280 Saiv~~~~~~~~~~~~~~~~~~~~~ 304 (311)
+++.+. .++....+++.+.++
T Consensus 232 raI~~~----~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 232 RNVWQR----RDALKFARALAELVY 252 (263)
T ss_dssp HHHHTS----TTHHHHHHHHHHHHC
T ss_pred hhhcCC----cCHHHHHHHHHHHHh
Confidence 999974 235555555555543
No 110
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.65 E-value=5.4e-07 Score=89.92 Aligned_cols=138 Identities=20% Similarity=0.210 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
...+.++.+.++|+|.||++..+.+| +..++.++++++.+ ++|+++..- ..
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~---------------------~~~~~~i~~i~~~~~~~pvi~~~v-------~t 306 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS---------------------VYQIAMVHYIKQKYPHLQVIGGNV-------VT 306 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS---------------------HHHHHHHHHHHHHCTTCEEEEEEE-------CS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc---------------------hhHHHHHHHHHHhCCCCceEeccc-------ch
Confidence 46788889999999999997655443 22356888888887 899886322 12
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+.++.+.++|+|++.+.--+ | -+ . ++ | ...| .|.. ..
T Consensus 307 ~~~a~~l~~aGad~I~vg~~~--------------G--~~---~-~t---~---------------~~~~-~g~~---~~ 344 (514)
T 1jcn_A 307 AAQAKNLIDAGVDGLRVGMGC--------------G--SI---C-IT---Q---------------EVMA-CGRP---QG 344 (514)
T ss_dssp HHHHHHHHHHTCSEEEECSSC--------------S--CC---B-TT---B---------------CCCS-CCCC---HH
T ss_pred HHHHHHHHHcCCCEEEECCCC--------------C--cc---c-cc---c---------------cccC-CCcc---ch
Confidence 456888899999999883101 1 00 0 01 0 0001 1110 12
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
...+.+.++++..++||++.+||++++++.+++..|||+|.+|++|...
T Consensus 345 ~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 345 TAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAAT 393 (514)
T ss_dssp HHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTS
T ss_pred hHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcC
Confidence 2346788888888999999999999999999999999999999999764
No 111
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=98.65 E-value=3e-07 Score=83.51 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=107.5
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+-+..+++++..+.++.+. ..+|++++|+++ . +..| .+.++.+|+. +.++++..-+
T Consensus 9 lalD~~~l~~~~~~v~~~~-~~v~~~Kv~~d~---------~-------~~~G------~~~v~~lr~~-~~~v~lD~kl 64 (246)
T 2yyu_A 9 VALDFPSKQEVERFLRPFA-GTPLFVKVGMEL---------Y-------YQEG------PAIVAFLKEQ-GHAVFLDLKL 64 (246)
T ss_dssp EECCCSSHHHHHHHHGGGT-TSCCEEEECHHH---------H-------HHHT------HHHHHHHHHT-TCEEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhc-ccccEEEeCHHH---------H-------HHhC------HHHHHHHHHC-CCeEEEEeec
Confidence 4556667766555555441 227999998665 1 2223 3467777765 4566665533
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHH---cCCC--eEEEeCCCChH--HHH-HHHHHhCC--c
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMK---NKIE--LVLFTTPTTPT--DRM-KAIVEASE--G 217 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~---~gi~--~I~lisp~t~~--eri-~~i~~~a~--g 217 (311)
..+-.+ ...+++.+.+.|+|.+.++=..-.+ ..++.+.+++ +|.+ .++.++|.|+. +.+ +.+.-... .
T Consensus 65 ~Dip~t-~~~~~~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d 143 (246)
T 2yyu_A 65 HDIPNT-VKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVE 143 (246)
T ss_dssp CSCHHH-HHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHH
T ss_pred ccchHH-HHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHH
Confidence 322111 2347888899999999997332233 4567778887 7854 24556766662 333 22100000 0
Q ss_pred eEEEEecC-CccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHH-----------HHHHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSI-GVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPE-----------HVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~-G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e-----------~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+..++.. .-.|.. ++-.+..+ ++++|+.. ..++.|-.||+ ++ ++.++.++|||.+|||+++.+
T Consensus 144 ~Vl~ma~~~~~~G~~-g~V~~~~e-i~~lr~~~~~~~i~V~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 220 (246)
T 2yyu_A 144 TVAHYAALAKESGLD-GVVCSANE-AAFIKERCGASFLAVTPGIR-FADDAAHDQVRVVTPRKARALGSDYIVIGRSLTR 220 (246)
T ss_dssp HHHHHHHHHHHHTCC-EEECCHHH-HHHHHHHHCTTSEEEECCCC-CCC-------CCCCHHHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHHHhCCC-EEEeCHHH-HHHHHHhcCCCCEEEeCCcC-CCCCCcccccccCCHHHHHHcCCCEEEECHhhcC
Confidence 01011110 001111 11122234 77777765 35689999997 35 688888999999999999997
No 112
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.63 E-value=6.5e-08 Score=93.10 Aligned_cols=164 Identities=19% Similarity=0.259 Sum_probs=97.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc----cCCCcEEEEecCcch
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP----QMSCPIALFTYYNPI 151 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~----~~~iPiilm~Y~n~i 151 (311)
.++..+.++.+.+ ++|+|||.+ |-|-..|- +.++..-.+.++++.+++.++ ..++||.+-.-.+.-
T Consensus 163 ~~dy~~~~~~~~~-~ad~ielNi--sCPn~~G~-------~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~ 232 (367)
T 3zwt_A 163 AEDYAEGVRVLGP-LADYLVVNV--SSPNTAGL-------RSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLT 232 (367)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEEC--CCTTSTTG-------GGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCC
T ss_pred HHHHHHHHHHHhh-hCCEEEEEC--CCCCCCCc-------cccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCC
Confidence 4667777777765 699999975 44544441 112221123344444444332 267999987533210
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCC
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGAR 231 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~ 231 (311)
.-.+.++++.+.++|+|||++..-.... .+. ..|. . ....| |.+|.
T Consensus 233 -~~~~~~ia~~~~~aGadgi~v~ntt~~r----------~~~-----~~~~--------~-~~~~g--------GlSG~- 278 (367)
T 3zwt_A 233 -SQDKEDIASVVKELGIDGLIVTNTTVSR----------PAG-----LQGA--------L-RSETG--------GLSGK- 278 (367)
T ss_dssp -HHHHHHHHHHHHHHTCCEEEECCCBSCC----------CTT-----CCCT--------T-TTSSS--------EEEEG-
T ss_pred -HHHHHHHHHHHHHcCCCEEEEeCCCccc----------ccc-----cccc--------c-ccccC--------CcCCc-
Confidence 0013456667777788887766322110 000 0000 0 00011 22332
Q ss_pred CCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 232 ASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 232 ~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.+...+.++++++.+ ++||+..+||.|++++.+.+..|||+|.|||+++.
T Consensus 279 -~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 279 -PLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp -GGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred -ccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHh
Confidence 22233457899999988 89999999999999999999999999999999963
No 113
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.63 E-value=4.4e-07 Score=87.95 Aligned_cols=138 Identities=17% Similarity=0.179 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
.+.+.++.+.++|+|.|++..++.|| +...+.++++|+.+ ++||++-+- ..
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~---------------------~~~~e~i~~ir~~~~~~pviv~~v-------~~ 204 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHS---------------------TRIIELIKKIKTKYPNLDLIAGNI-------VT 204 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSS---------------------HHHHHHHHHHHHHCTTCEEEEEEE-------CS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCCh---------------------HHHHHHHHHHHHHCCCCeEEEcCC-------Cc
Confidence 46777888899999999997555443 23456788888877 899887221 11
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+.++.+.++|+|+|++. .-. |- + .+ .+ .. . |. |.. ..
T Consensus 205 ~~~a~~a~~~Gad~I~vg-~~~-------------G~-----~--~~--~~--~~-~------------~~-g~p---~~ 242 (404)
T 1eep_A 205 KEAALDLISVGADCLKVG-IGP-------------GS-----I--CT--TR--IV-A------------GV-GVP---QI 242 (404)
T ss_dssp HHHHHHHHTTTCSEEEEC-SSC-------------ST-----T--SH--HH--HH-H------------CC-CCC---HH
T ss_pred HHHHHHHHhcCCCEEEEC-CCC-------------Cc-----C--cC--cc--cc-C------------CC-Ccc---hH
Confidence 457888889999999883 200 10 0 00 11 00 0 11 111 01
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
.....+.++.+..++||++.+||++++++.+++..|||+|.+|++|...
T Consensus 243 ~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~ 291 (404)
T 1eep_A 243 TAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGT 291 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTB
T ss_pred HHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcC
Confidence 1123344444456899999999999999999999999999999999754
No 114
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.61 E-value=1.7e-06 Score=82.43 Aligned_cols=153 Identities=17% Similarity=0.176 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHCCCCEEEEc--C---------CCCCCCCChHHHHHHHHHHHHcCCCHH----HHHHHHHHhhccC--CC
Q 021527 78 TTAEALKLLDSCGSDIIELG--V---------PYSDPLADGPVIQAAATRSLARGTNFN----AILSMLKEVVPQM--SC 140 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG--~---------PfsDP~aDGp~Iq~a~~~Al~~G~~~~----~~~~~i~~ir~~~--~i 140 (311)
.+.+.++.+.++|.|+|||- . |.++---| +.|-+++ -.+++++.+|+.+ +.
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D------------~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTD------------AYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCS------------TTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCC------------CCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 57888889999999999993 2 44322222 1233333 3477888888876 78
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
||.+-.-.+.... .....++..++.+.+.+.|++.+-+....+... ..++
T Consensus 221 pV~vRls~~~~~~--------------------~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~----------~~~~ 270 (349)
T 3hgj_A 221 PLFVRVSATDWGE--------------------GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLR----------VRIP 270 (349)
T ss_dssp CEEEEEESCCCST--------------------TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSS----------SCCC
T ss_pred eEEEEeccccccC--------------------CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcc----------cccC
Confidence 8887532211100 123446666677777777777666553221100 0000
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.+ +....++++++|+.+++||++++||++++++.++++.| ||.|.+|++++.
T Consensus 271 -------~~-----~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 271 -------LA-----PGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp -------CC-----TTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred -------CC-----ccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 00 11124678899998899999999999999999999999 999999999885
No 115
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.61 E-value=7.3e-07 Score=85.73 Aligned_cols=156 Identities=21% Similarity=0.213 Sum_probs=98.6
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEc--CCC------------CCCCCChHHHHHH-----HHHHH---HcCCCHHHHHHH
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELG--VPY------------SDPLADGPVIQAA-----ATRSL---ARGTNFNAILSM 130 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG--~Pf------------sDP~aDGp~Iq~a-----~~~Al---~~G~~~~~~~~~ 130 (311)
..|.+.+.+.++..+++|++.|.|. .|. ..|+. -..+... .-.++ ..-.+.....+.
T Consensus 142 ~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~-~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~ 220 (368)
T 2nli_A 142 AKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFG-MPIVQRYLRGTAEGMSLNNIYGASKQKISPRD 220 (368)
T ss_dssp BSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSC-CHHHHHHHTTSGGGC-----CTTBCSBCCHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcch-hhhhhcccccCCCCchHHhhhhccCchhhHHH
Confidence 4466888899999999999998874 333 12310 0111100 00000 000011122456
Q ss_pred HHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHH
Q 021527 131 LKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKA 210 (311)
Q Consensus 131 i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~ 210 (311)
++++|+.+++|+++-+.. ..+..+.+.++|+|+|++..-. | |
T Consensus 221 i~~lr~~~~~PvivK~v~-------~~e~a~~a~~~Gad~I~vs~~g--------------g--------------r--- 262 (368)
T 2nli_A 221 IEEIAGHSGLPVFVKGIQ-------HPEDADMAIKRGASGIWVSNHG--------------A--------------R--- 262 (368)
T ss_dssp HHHHHHHSSSCEEEEEEC-------SHHHHHHHHHTTCSEEEECCGG--------------G--------------T---
T ss_pred HHHHHHHcCCCEEEEcCC-------CHHHHHHHHHcCCCEEEEcCCC--------------c--------------C---
Confidence 888888888999886532 1456778888888888775311 0 0
Q ss_pred HHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 211 IVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 211 i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
. . .+| ++ ..+.+.++++.. ++||++.+||++++|+.+++..|||+|-||+.+...+.
T Consensus 263 -----~-------~--~~g-----~~-~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~ 321 (368)
T 2nli_A 263 -----Q-------L--YEA-----PG-SFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLA 321 (368)
T ss_dssp -----S-------C--SSC-----CC-HHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred -----C-------C--CCC-----CC-hHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHH
Confidence 0 0 011 11 235677777655 69999999999999999999999999999999998764
No 116
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.61 E-value=1.9e-06 Score=82.36 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc--CCCC------------CC------CCChH
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG--VPYS------------DP------LADGP 108 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG--~Pfs------------DP------~aDGp 108 (311)
.+++..... ..+...|-.|+ ..|.+.+.+.++..+++|+..|-+- .|.. -| ...++
T Consensus 111 s~e~v~~~~-~~~~~wfQlY~---~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~ 186 (352)
T 3sgz_A 111 SLEDIVAAA-PEGFRWFQLYM---KSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRAL 186 (352)
T ss_dssp CHHHHHHHS-TTCEEEEECCC---CSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---
T ss_pred CHHHHHHhc-cCccceecccc---CCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhccc
Confidence 355555431 12234566676 4577889999999999999998883 3321 11 00000
Q ss_pred HHHHHHHHHH-HcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHH
Q 021527 109 VIQAAATRSL-ARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKE 187 (311)
Q Consensus 109 ~Iq~a~~~Al-~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~ 187 (311)
. .......+ ...++..-..+.++.+|+.+++||++-+-.+ .+..+.+.++|+|++++..-.
T Consensus 187 ~-~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~-------~e~A~~a~~~GaD~I~vsn~G---------- 248 (352)
T 3sgz_A 187 K-EEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILT-------KEDAELAMKHNVQGIVVSNHG---------- 248 (352)
T ss_dssp -------------CCCTTCCHHHHHHHHHHCCSCEEEEEECS-------HHHHHHHHHTTCSEEEECCGG----------
T ss_pred c-cccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCc-------HHHHHHHHHcCCCEEEEeCCC----------
Confidence 0 00000000 0001111123578888888899998875322 356778888999998776310
Q ss_pred HHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHH
Q 021527 188 AMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHV 265 (311)
Q Consensus 188 ~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v 265 (311)
| .. ..|. + ...+.+.++++.+ ++||++.+||++.+|+
T Consensus 249 ----G-~~-------------------------------~d~~----~-~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv 287 (352)
T 3sgz_A 249 ----G-RQ-------------------------------LDEV----S-ASIDALREVVAAVKGKIEVYMDGGVRTGTDV 287 (352)
T ss_dssp ----G-TS-------------------------------SCSS----C-CHHHHHHHHHHHHTTSSEEEEESSCCSHHHH
T ss_pred ----C-Cc-------------------------------cCCC----c-cHHHHHHHHHHHhCCCCeEEEECCCCCHHHH
Confidence 0 00 0010 1 1235566666654 6999999999999999
Q ss_pred HHHHHcCCcEEEEhhHhhchhh
Q 021527 266 QQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 266 ~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.+.+..|||+|.||++++..+.
T Consensus 288 ~kaLalGA~aV~iGr~~l~~l~ 309 (352)
T 3sgz_A 288 LKALALGARCIFLGRPILWGLA 309 (352)
T ss_dssp HHHHHTTCSEEEESHHHHHHHH
T ss_pred HHHHHcCCCEEEECHHHHHHHH
Confidence 9999999999999999997653
No 117
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.61 E-value=5.8e-07 Score=86.28 Aligned_cols=159 Identities=15% Similarity=0.154 Sum_probs=103.1
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+++.....++.+ .++.|. .|++ +.+.+.++.+.++|+|+|++..+...+ +.+.+
T Consensus 77 ~ee~~~~i~~~~--~~~~~~-~g~~--~~~~e~~~~a~~aGvdvI~id~a~G~~---------------------~~~~e 130 (361)
T 3r2g_A 77 IEENIQEFKKCK--GPVFVS-VGCT--ENELQRAEALRDAGADFFCVDVAHAHA---------------------KYVGK 130 (361)
T ss_dssp HHHHHHHHHTCC--SCCBEE-ECSS--HHHHHHHHHHHHTTCCEEEEECSCCSS---------------------HHHHH
T ss_pred HHHHHHHHhhcc--eEEEEE-cCCC--HHHHHHHHHHHHcCCCEEEEeCCCCCc---------------------HhHHH
Confidence 444444444332 233332 3554 567889999999999999998665322 13356
Q ss_pred HHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHH
Q 021527 130 MLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRM 208 (311)
Q Consensus 130 ~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri 208 (311)
.++++|+.. ++||+.-.- ...+.++.+.++|+|+|.+.--| | .....|.
T Consensus 131 ~I~~ir~~~~~~~Vi~G~V-------~T~e~A~~a~~aGaD~I~Vg~g~--------------G---------~~~~tr~ 180 (361)
T 3r2g_A 131 TLKSLRQLLGSRCIMAGNV-------ATYAGADYLASCGADIIKAGIGG--------------G---------SVCSTRI 180 (361)
T ss_dssp HHHHHHHHHTTCEEEEEEE-------CSHHHHHHHHHTTCSEEEECCSS--------------S---------SCHHHHH
T ss_pred HHHHHHHhcCCCeEEEcCc-------CCHHHHHHHHHcCCCEEEEcCCC--------------C---------cCccccc
Confidence 788888764 788887321 12346778889999998773111 0 0000111
Q ss_pred HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 209 KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
. +|. +.+ ..+.|.++++... ||++.+||++++++.+++..|||+|.+||.|...-+
T Consensus 181 --~----------------~g~--g~p--~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 181 --K----------------TGF--GVP--MLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp --H----------------HCC--CCC--HHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTT
T ss_pred --c----------------CCc--cHH--HHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 0 110 112 2345666665544 999999999999999999999999999999998754
No 118
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.59 E-value=1.7e-06 Score=86.51 Aligned_cols=154 Identities=18% Similarity=0.214 Sum_probs=94.1
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEE--cCCC------------CCCCCChHHHHHHH----------HHHHHcCCCHHHHH
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIEL--GVPY------------SDPLADGPVIQAAA----------TRSLARGTNFNAIL 128 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IEl--G~Pf------------sDP~aDGp~Iq~a~----------~~Al~~G~~~~~~~ 128 (311)
.+|.+.+.+.++..+++|+|.|+| +.|. +-|.. .++... ...+..-.+..-..
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~---~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~ 332 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKA---GPKAMKKTNVEESQGASRALSKFIDPSLTW 332 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC----------CCCCSSCCCGGGGCBTTBCTTCCH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcc---cccccccccccccccHHHHHhhccChHhHH
Confidence 455677889999999999997666 4343 11210 011000 00000000111124
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHH
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRM 208 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri 208 (311)
+.++++|+.+++||++-+..+ .+.++.+.++|+|+|++..-.-. .++ ..+
T Consensus 333 ~~i~~lr~~~~~PvivKgv~~-------~e~A~~a~~aGad~I~vs~hgG~------------~~d----~~~------- 382 (511)
T 1kbi_A 333 KDIEELKKKTKLPIVIKGVQR-------TEDVIKAAEIGVSGVVLSNHGGR------------QLD----FSR------- 382 (511)
T ss_dssp HHHHHHHHHCSSCEEEEEECS-------HHHHHHHHHTTCSEEEECCTTTT------------SST----TCC-------
T ss_pred HHHHHHHHHhCCcEEEEeCCC-------HHHHHHHHHcCCCEEEEcCCCCc------------cCC----CCC-------
Confidence 568888888899999875322 35677888999999888421100 000 000
Q ss_pred HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-------CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 209 KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-------TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-------~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+ ..+.+.++++.+ ++||++.+||++++++.+++..|||+|.||++
T Consensus 383 ---------------------------~-~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~ 434 (511)
T 1kbi_A 383 ---------------------------A-PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRP 434 (511)
T ss_dssp ---------------------------C-HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred ---------------------------c-hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 0 112333333322 69999999999999999999999999999999
Q ss_pred hhchhh
Q 021527 282 MVKLLG 287 (311)
Q Consensus 282 iv~~~~ 287 (311)
+...+.
T Consensus 435 ~l~~~~ 440 (511)
T 1kbi_A 435 FLYANS 440 (511)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998664
No 119
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=98.59 E-value=1.9e-06 Score=79.92 Aligned_cols=175 Identities=12% Similarity=0.091 Sum_probs=119.7
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhc
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILK 153 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~ 153 (311)
-+.+..+++++.|++.|++.||+|.|-+ |-+.+. +++.++.++.+++..++|+.++. .|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~---------------~~~~~e~~~~i~~~~~~~v~~l~-~n---- 81 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVS-PKWVPQ---------------LADSREVMAGIRRADGVRYSVLV-PN---- 81 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSC-TTTCGG---------------GTTHHHHHHHSCCCSSSEEEEEC-SS----
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcC-cccccc---------------ccCHHHHHHHHHhCCCCEEEEEe-CC----
Confidence 4568899999999999999999998765 432220 01224577777766678887765 34
Q ss_pred cCHHHHHHHHHHcCCcEEEec------------CCChhh----HHHHHHHHHHcCCCeEEEeC--------CCChHHHHH
Q 021527 154 RGVDNFMSTVRDIGIRGLVVP------------DVPLEE----TESLQKEAMKNKIELVLFTT--------PTTPTDRMK 209 (311)
Q Consensus 154 ~g~~~fi~~~~~aGadGviip------------Dlp~ee----~~~~~~~~~~~gi~~I~lis--------p~t~~eri~ 209 (311)
.+-++.+.++|++.|.+. ..+.+| ..+..+.++++|+.+-..++ ..++.+.+.
T Consensus 82 ---~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~ 158 (295)
T 1ydn_A 82 ---MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVA 158 (295)
T ss_dssp ---HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHH
T ss_pred ---HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHH
Confidence 456788999999998886 345554 45567888999997642221 123345544
Q ss_pred HHHH----hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC-CcEEE----eeCCCCHHHHHHHHHcCCcEEEE
Q 021527 210 AIVE----ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST-KPVAV----GFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 210 ~i~~----~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~-~Pv~v----GfGIst~e~v~~v~~~GADGvIV 278 (311)
++++ ..-..+++....|. ..|..+.++++.+++.++ +|+.+ ++|... .+.....++|++-|=+
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G~-----~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~-an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIGR-----GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRAL-DNIRVSLEKGLRVFDA 230 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTSC-----CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHH-HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCEEEecCCCCC-----cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHH-HHHHHHHHhCCCEEEe
Confidence 4444 34445676664443 346678899999999886 78766 577764 6777888899997754
No 120
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=98.58 E-value=3.8e-08 Score=89.05 Aligned_cols=202 Identities=16% Similarity=0.186 Sum_probs=112.1
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+.+..+++++..+.++.+. ..+|++++|+++ . +..| .+.++.+|+. +.++++..-+
T Consensus 8 lalD~~~l~~~~~~~~~~~-~~v~~~Kv~~d~---------~-------~~~G------~~~v~~l~~~-~~~v~lD~kl 63 (239)
T 1dbt_A 8 IALDFASAEETLAFLAPFQ-QEPLFVKVGMEL---------F-------YQEG------PSIVKQLKER-NCELFLDLKL 63 (239)
T ss_dssp EECCCSSHHHHHHHTGGGT-TSCCEEEECHHH---------H-------HHHT------HHHHHHHHHT-TCEEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhc-ccCcEEEECHHH---------H-------HHhC------HHHHHHHHHC-CCcEEEEecc
Confidence 3455666666555554431 127999998665 1 2223 4467777765 4566665533
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHc---CCC-e-EEEeCCCC--hHHHH-HHH-HHhC-Cc
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKN---KIE-L-VLFTTPTT--PTDRM-KAI-VEAS-EG 217 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~---gi~-~-I~lisp~t--~~eri-~~i-~~~a-~g 217 (311)
..+-.+ ..++++.+.+.|+|.+.++=..-.+ ...+.+.++++ |.+ . +..+++.| +.+.+ +.+ .... ..
T Consensus 64 ~Dip~t-~~~~~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d 142 (239)
T 1dbt_A 64 HDIPTT-VNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLID 142 (239)
T ss_dssp CSCHHH-HHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHH
T ss_pred ccchHH-HHHHHHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHH
Confidence 222111 2357888999999999996332233 45677888888 875 2 34444433 22444 221 0000 00
Q ss_pred eEEEEecC-CccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHH-----------HHHHHcCCcEEEEhhHhhc
Q 021527 218 FVYLVSSI-GVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHV-----------QQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~-G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v-----------~~v~~~GADGvIVGSaiv~ 284 (311)
.+..++.. .-.|...-+.. . +.++++|+.. +.++.|-.||+ +++. .++.++|||.+|||+++.+
T Consensus 143 ~Vl~ma~~~~~~G~~g~v~~-~-~~i~~lr~~~~~~~i~v~gGI~-~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~ 219 (239)
T 1dbt_A 143 TVVHYSKQAEESGLDGVVCS-V-HEAKAIYQAVSPSFLTVTPGIR-MSEDAANDQVRVATPAIAREKGSSAIVVGRSITK 219 (239)
T ss_dssp HHHHHHHHHHHTTCSEEECC-G-GGHHHHTTTSCTTCEEEECCBC-CTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEEC-H-HHHHHHHHhcCCCcEEEeCCcC-CCCCCccceeccCCHHHHHHcCCCEEEEChhhcC
Confidence 11111111 01121111111 1 3577788776 36899999997 4565 7888999999999999997
Q ss_pred hhhhcCCchhHHHHHHHH
Q 021527 285 LLGEAQSPEEGLKELEKF 302 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~ 302 (311)
. .++.+.++++++-
T Consensus 220 a----~dp~~a~~~l~~~ 233 (239)
T 1dbt_A 220 A----EDPVKAYKAVRLE 233 (239)
T ss_dssp S----SCHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHH
Confidence 3 2344444444443
No 121
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=98.57 E-value=1.3e-06 Score=79.81 Aligned_cols=171 Identities=18% Similarity=0.237 Sum_probs=107.1
Q ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC-cchhccCH-
Q 021527 79 TAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY-NPILKRGV- 156 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~-n~i~~~g~- 156 (311)
..+.+...+++|||-|||+ ++ ++. .|.|.. +..++.+++.+++||.+|.-- ..-|.|.-
T Consensus 10 s~~~a~~A~~~GAdRIELc---~~-L~~-------------GGlTPS--~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~ 70 (256)
T 1twd_A 10 SMECALTAQQNGADRVELC---AA-PKE-------------GGLTPS--LGVLKSVRQRVTIPVHPIIRPRGGDFCYSDG 70 (256)
T ss_dssp SHHHHHHHHHTTCSEEEEC---BC-GGG-------------TCBCCC--HHHHHHHHHHCCSCEEEBCCSSSSCSCCCHH
T ss_pred CHHHHHHHHHcCCCEEEEc---CC-ccc-------------CCCCCC--HHHHHHHHHHcCCceEEEECCCCCCCcCCHH
Confidence 3577888899999999998 33 222 245433 346677777789999999411 01122332
Q ss_pred -----HHHHHHHHHcCCcEEEecCCCh------hhHHHHHHHHHHcCCCeEEEeC---CCChHHHHHHHHHhCCceEEEE
Q 021527 157 -----DNFMSTVRDIGIRGLVVPDVPL------EETESLQKEAMKNKIELVLFTT---PTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 157 -----~~fi~~~~~aGadGviipDlp~------ee~~~~~~~~~~~gi~~I~lis---p~t~~eri~~i~~~a~gfiY~v 222 (311)
.+.++.+++.|+|||++.=|.. +...++.+.+. |+...+--+ -..+.+-++.+.+. ||.-+.
T Consensus 71 E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~l--G~~rIL 146 (256)
T 1twd_A 71 EFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAEL--GIARVL 146 (256)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHH--TCCEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHc--CCCEEE
Confidence 3466778999999999964432 33555665553 666444211 12234556666665 676555
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+ +|.+...... .+.|+++.+.. .+-|++|+||+ ++|+.++...|++-+=.
T Consensus 147 T----SG~~~~a~~g-~~~L~~Lv~~a~~i~Im~GgGv~-~~Ni~~l~~tGv~e~H~ 197 (256)
T 1twd_A 147 T----SGQKSDALQG-LSKIMELIAHRDAPIIMAGAGVR-AENLHHFLDAGVLEVHS 197 (256)
T ss_dssp E----CTTSSSTTTT-HHHHHHHHTSSSCCEEEEESSCC-TTTHHHHHHHTCSEEEE
T ss_pred C----CCCCCCHHHH-HHHHHHHHHhhCCcEEEecCCcC-HHHHHHHHHcCCCeEeE
Confidence 3 3444333333 35677765533 56699999997 69999998888887753
No 122
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.57 E-value=2.2e-06 Score=82.44 Aligned_cols=187 Identities=14% Similarity=0.172 Sum_probs=109.9
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcC-CCHHHHHHHHHHhhccCCCcEE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG-TNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G-~~~~~~~~~i~~ir~~~~iPii 143 (311)
++.-+.++.+. .+..+..+..|+|.+++.+.+ .|... ...| .+.++.++.++++++.+++||+
T Consensus 147 ~ianig~~~~~----e~~~~~ve~~~adal~ihln~---------~qe~~---~p~Gd~~~~~~~~~I~~l~~~~~~PVi 210 (365)
T 3sr7_A 147 LATNIGLDKPY----QAGLQAVRDLQPLFLQVHINL---------MQELL---MPEGEREFRSWKKHLSDYAKKLQLPFI 210 (365)
T ss_dssp EEEEEETTSCH----HHHHHHHHHHCCSCEEEEECH---------HHHHT---SSSSCCCCHHHHHHHHHHHHHCCSCEE
T ss_pred EEEEeCCCCCH----HHHHHHHHhcCCCEEEEeccc---------ccccc---CCCCCCcHHHHHHHHHHHHHhhCCCEE
Confidence 44455555441 256677778899999997442 12211 0122 4566778899999999999999
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+-.-.+ .-..+.++.+.++|+|+|.+..-. |-. +....+ .|.. . | .
T Consensus 211 vK~vg~----g~s~e~A~~l~~aGad~I~V~g~G--------------Gt~---~a~ie~--~r~~------~---~--~ 256 (365)
T 3sr7_A 211 LKEVGF----GMDVKTIQTAIDLGVKTVDISGRG--------------GTS---FAYIEN--RRGG------N---R--S 256 (365)
T ss_dssp EEECSS----CCCHHHHHHHHHHTCCEEECCCBC------------------------------------------C--G
T ss_pred EEECCC----CCCHHHHHHHHHcCCCEEEEeCCC--------------Ccc---cchhhc--cccc------c---c--c
Confidence 984211 012467888999999999875321 000 000000 0100 0 0 0
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHH
Q 021527 224 SIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKF 302 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~ 302 (311)
+.. ..+.+ ..+.+.+++... ++||++.+||+++.|+.+.+..|||+|-+|++++..+...+ .+.-.+.++.+
T Consensus 257 --~~~--~~g~p--t~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G-~~~v~~~l~~l 329 (365)
T 3sr7_A 257 --YLN--QWGQT--TAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHS-VHEVIAIVNGW 329 (365)
T ss_dssp --GGT--TCSCB--HHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSC-HHHHHHHHHHH
T ss_pred --ccc--ccccc--HHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcC-hHHHHHHHHHH
Confidence 000 01122 123455565543 68999999999999999999999999999999998764321 11122344555
Q ss_pred HHHHHh
Q 021527 303 AKSLKS 308 (311)
Q Consensus 303 ~~~l~~ 308 (311)
.++|+.
T Consensus 330 ~~eL~~ 335 (365)
T 3sr7_A 330 KEDLRL 335 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 123
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=98.56 E-value=1.4e-06 Score=78.54 Aligned_cols=148 Identities=19% Similarity=0.235 Sum_probs=97.3
Q ss_pred HHHHhhccCCCcEEEEecCcchhccC--H---HHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHcCCCeEEEeC
Q 021527 130 MLKEVVPQMSCPIALFTYYNPILKRG--V---DNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKNKIELVLFTT 200 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~Y~n~i~~~g--~---~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~gi~~I~lis 200 (311)
.+..+++.+++|+.-- | +..+. . +--+..+++.|+|.+++.. +.++|..+..+.+.++|+++++-+.
T Consensus 47 ~L~~v~~~~~i~v~aQ---d-v~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 47 ELGLVSQSVDIPVYAQ---G-ADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp GHHHHHTTCSSCBEES---C-CSBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHhcCCceEee---E-CChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444555567786552 2 22111 0 1125678999999999975 5567888899999999999877665
Q ss_pred CCChHHHHHHHHHhCCceEEEEe--cCCccCCC-CCCCch-HHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcE
Q 021527 201 PTTPTDRMKAIVEASEGFVYLVS--SIGVTGAR-ASISGH-VQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADG 275 (311)
Q Consensus 201 p~t~~eri~~i~~~a~gfiY~vs--~~G~TG~~-~~~~~~-~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADG 275 (311)
.+ .++ +.+.......|-+-. ..| ||.. ....++ +.+..+.+|+.. +++++.|+||++++++..+...|+||
T Consensus 123 e~-~e~--~~~~~~~~~iIayep~waiG-tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG 198 (226)
T 1w0m_A 123 DP-RTS--LAAAALGPHAVAVEPPELIG-TGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRG 198 (226)
T ss_dssp SH-HHH--HHHHHTCCSEEEECCGGGTT-TSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CH-HHH--HHHhcCCCCEEEEcChhhhc-cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCE
Confidence 33 222 223333334444432 233 5510 112333 555566666654 68999999999999999999999999
Q ss_pred EEEhhHhhch
Q 021527 276 VIVGSAMVKL 285 (311)
Q Consensus 276 vIVGSaiv~~ 285 (311)
+-||+++++.
T Consensus 199 ~LVG~a~l~a 208 (226)
T 1w0m_A 199 VLLASAAVKA 208 (226)
T ss_dssp EEECHHHHTC
T ss_pred EEECHHHHCC
Confidence 9999999984
No 124
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.55 E-value=2.1e-07 Score=91.57 Aligned_cols=46 Identities=17% Similarity=0.112 Sum_probs=42.8
Q ss_pred HHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 239 QTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 239 ~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.++++++++.+ ++||+..+||.|++++.+.+..|||+|-||++++.
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 407 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 47899999988 89999999999999999999999999999999874
No 125
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.52 E-value=1.1e-06 Score=82.29 Aligned_cols=210 Identities=18% Similarity=0.209 Sum_probs=122.2
Q ss_pred CChhHHHHHHHHHHHcCCccEEEE-----EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH
Q 021527 45 SPTVGLAETFTRLKKQGKVALIPY-----ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119 (311)
Q Consensus 45 ~~m~~i~~~f~~~~~~~~~~li~y-----i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~ 119 (311)
.++.|++..|.. +.||..++++ .-|. +.++.+.+.+..+. .|+|.|-+- -|
T Consensus 39 Gk~~Rl~ri~~~--~~G~~~iv~~DHG~~~gp~-~gl~~~~~~i~~l~-~g~dav~~~--------~G------------ 94 (295)
T 3glc_A 39 GMQSRLSRIFNP--KTGKTVMLAFDHGYFQGPT-TGLERIDINIAPLF-EHADVLMCT--------RG------------ 94 (295)
T ss_dssp HHHHHHHHHSCT--TTSCEEEEECCTHHHHCSC-TTCTTHHHHTGGGG-GGCSEEEEC--------HH------------
T ss_pred HHHHHHHHhcCC--CCCCEEEEecCCCcccCCC-CchhhhHHHHHHhh-cCCCEEEEC--------Hh------------
Confidence 344566666642 2355444442 1233 45667777777765 689999984 12
Q ss_pred cCCCHHHHHHHHHHhhc-cCCCcEEEEecCcc-hhc----cCHHHHHHHHHHcCCcEEEec----CCC----hhhHHHHH
Q 021527 120 RGTNFNAILSMLKEVVP-QMSCPIALFTYYNP-ILK----RGVDNFMSTVRDIGIRGLVVP----DVP----LEETESLQ 185 (311)
Q Consensus 120 ~G~~~~~~~~~i~~ir~-~~~iPiilm~Y~n~-i~~----~g~~~fi~~~~~aGadGviip----Dlp----~ee~~~~~ 185 (311)
+++...+ ..++|+++-.-.+. ++. .-+..-++.+.+.|+|+|.+. +-. +++..+++
T Consensus 95 ----------~~~~~~~~~~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~ 164 (295)
T 3glc_A 95 ----------ILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLV 164 (295)
T ss_dssp ----------HHHHHSCGGGCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHH
T ss_pred ----------HHhhhccccCCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHH
Confidence 3333322 24788887632111 111 011124677889999998764 111 23456788
Q ss_pred HHHHHcCCCeEEEeCC----CChHHHHHHHHHh--CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCC
Q 021527 186 KEAMKNKIELVLFTTP----TTPTDRMKAIVEA--SEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGI 259 (311)
Q Consensus 186 ~~~~~~gi~~I~lisp----~t~~eri~~i~~~--a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGI 259 (311)
+.|+++|+.+|....+ .+.++.+...++. ..|..|+-+. .|+ +.++++.+.+.+||++-+|+
T Consensus 165 ~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~--~t~----------e~~~~vv~~~~vPVv~~GG~ 232 (295)
T 3glc_A 165 DAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY--YVE----------KGFERIVAGCPVPIVIAGGK 232 (295)
T ss_dssp HHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE--CCT----------TTHHHHHHTCSSCEEEECCS
T ss_pred HHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC--CCH----------HHHHHHHHhCCCcEEEEECC
Confidence 8999999987764322 1233322222222 3455555322 232 12567777778999999999
Q ss_pred CCH-----HHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHH
Q 021527 260 SKP-----EHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAK 304 (311)
Q Consensus 260 st~-----e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~ 304 (311)
++. ++++++.+.||+|++||+++... .++...++.+.+.++
T Consensus 233 ~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~----~dp~~~~~al~~ivh 278 (295)
T 3glc_A 233 KLPEREALEMCWQAIDQGASGVDMGRNIFQS----DHPVAMMKAVQAVVH 278 (295)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEESHHHHTS----SSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC----cCHHHHHHHHHHHHh
Confidence 853 36778889999999999999974 234445555555443
No 126
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=98.52 E-value=8.5e-06 Score=76.03 Aligned_cols=172 Identities=14% Similarity=0.184 Sum_probs=116.4
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..+++++.|++.|+|.||+|.|- .|-.- |... +..+.++.+++..++|+.++. .|
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~-~~~~~-~~~~--------------d~~~~~~~~~~~~~~~~~~l~-~~----- 85 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFV-SPKWV-PQMA--------------GSAEVFAGIRQRPGVTYAALA-PN----- 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECS-CTTTC-GGGT--------------THHHHHHHSCCCTTSEEEEEC-CS-----
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCc-Ccccc-cccc--------------CHHHHHHHhhhcCCCEEEEEe-CC-----
Confidence 56889999999999999999999743 33211 1110 112345666656678887765 23
Q ss_pred CHHHHHHHHHHcCCcEEEecC------------CChhh----HHHHHHHHHHcCCCeEEEe-----CC---CChHHHHHH
Q 021527 155 GVDNFMSTVRDIGIRGLVVPD------------VPLEE----TESLQKEAMKNKIELVLFT-----TP---TTPTDRMKA 210 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipD------------lp~ee----~~~~~~~~~~~gi~~I~li-----sp---~t~~eri~~ 210 (311)
.++++.+.++|++.|.+.| .+.|| ..+..+.++++|+.+-..+ .| .++++...+
T Consensus 86 --~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 163 (302)
T 2ftp_A 86 --LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAW 163 (302)
T ss_dssp --HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHH
T ss_pred --HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 5789999999999988743 33343 5667888899998753221 12 134455444
Q ss_pred HHH----hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 211 IVE----ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 211 i~~----~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
+++ ..-..+++.+..|. ..|..+.++++++++.+ ++|+.+ ++|... .++...+++|++-|
T Consensus 164 ~~~~~~~~G~d~i~l~DT~G~-----~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~-An~laAv~aGa~~v 232 (302)
T 2ftp_A 164 VARELQQMGCYEVSLGDTIGV-----GTAGATRRLIEAVASEVPRERLAGHFHDTYGQAL-ANIYASLLEGIAVF 232 (302)
T ss_dssp HHHHHHHTTCSEEEEEESSSC-----CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHH-HHHHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEEEEeCCCCC-----cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHH-HHHHHHHHhCCCEE
Confidence 444 33345666665554 34667889999999988 688876 578874 67888888999877
No 127
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=98.51 E-value=3.5e-07 Score=82.15 Aligned_cols=175 Identities=19% Similarity=0.243 Sum_probs=105.6
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhh---ccCCCcEEEEecC-cchhccC
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVV---PQMSCPIALFTYY-NPILKRG 155 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir---~~~~iPiilm~Y~-n~i~~~g 155 (311)
.+.+...+++|||-|||. ++ ++.| |.|.. +..++.++ +.+++||.+|.-- ..-|.|.
T Consensus 11 ~~~a~~A~~~GAdRIELc---~~-L~~G-------------GlTPS--~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys 71 (224)
T 2bdq_A 11 LTDLTRLDKAIISRVELC---DN-LAVG-------------GTTPS--YGVIKEANQYLHEKGISVAVMIRPRGGNFVYN 71 (224)
T ss_dssp TTTGGGCCTTTCCEEEEE---BC-GGGT-------------CBCCC--HHHHHHHHHHHHHTTCEEEEECCSSSSCSCCC
T ss_pred HHHHHHHHHcCCCEEEEc---CC-cccC-------------CcCCC--HHHHHHHHHhhhhcCCceEEEECCCCCCCcCC
Confidence 355667789999999998 33 2222 44432 23556666 7789999999511 0112233
Q ss_pred H------HHHHHHHHHcCCcEEEecCCC------hhhHHHHHHHHHHcCCCeEEEe----C-CCChHHHHHHHHHhCCce
Q 021527 156 V------DNFMSTVRDIGIRGLVVPDVP------LEETESLQKEAMKNKIELVLFT----T-PTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 156 ~------~~fi~~~~~aGadGviipDlp------~ee~~~~~~~~~~~gi~~I~li----s-p~t~~eri~~i~~~a~gf 218 (311)
- .+.++.+++.|+|||++.=|. .+...++.+.+. |+...+-- . ...+.+-++.+.+. ||
T Consensus 72 ~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~l--Gv 147 (224)
T 2bdq_A 72 DLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVAL--GF 147 (224)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHc--CC
Confidence 2 346677999999999995332 233556666553 67655522 2 12334556666554 77
Q ss_pred EEEEecCCccCCCCC--CCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhHhhc
Q 021527 219 VYLVSSIGVTGARAS--ISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSAMVK 284 (311)
Q Consensus 219 iY~vs~~G~TG~~~~--~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSaiv~ 284 (311)
.-+.+ +|.+.. ... -.+.|+++.+.. .+-|++|+||+ ++|+.++. ..|++-+= ||.++.
T Consensus 148 ~rILT----SG~~~~~~a~~-g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~~l~~~tGv~e~H-~s~i~~ 211 (224)
T 2bdq_A 148 TRILL----HGSSNGEPIIE-NIKHIKALVEYANNRIEIMVGGGVT-AENYQYICQETGVKQAH-GTRITQ 211 (224)
T ss_dssp CEEEE----CSCSSCCCGGG-GHHHHHHHHHHHTTSSEEEECSSCC-TTTHHHHHHHHTCCEEE-ETTCC-
T ss_pred CEEEC----CCCCCCCcHHH-HHHHHHHHHHhhCCCeEEEeCCCCC-HHHHHHHHHhhCCCEEc-cccccC
Confidence 66554 343333 222 335566654432 46799999997 69999998 57887764 565555
No 128
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.48 E-value=3.9e-06 Score=80.38 Aligned_cols=160 Identities=21% Similarity=0.242 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHH-----HHHHHcCCCHH----HHHHHHHHhhccC--CCcEEEEe
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAA-----TRSLARGTNFN----AILSMLKEVVPQM--SCPIALFT 146 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~-----~~Al~~G~~~~----~~~~~i~~ir~~~--~iPiilm~ 146 (311)
.+.+.++.+.++|.|+|||-. +.|-.+.+-. .|-.+.|-+++ -++++++.+|+.+ +.||.+-.
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~------a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRi 232 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHF------AHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARF 232 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEE------CTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcc------ccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 577888889999999999942 1122221110 11112333333 3477888888876 57887743
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCC
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIG 226 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G 226 (311)
-.+.....| +.+.++..++.+.+.+.|++.|-+...+.... ...
T Consensus 233 s~~~~~~~G-------------------~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~-------- 276 (363)
T 3l5l_A 233 GVLEYDGRD-------------------EQTLEESIELARRFKAGGLDLLSVSVGFTIPD---------TNI-------- 276 (363)
T ss_dssp EEECSSSCH-------------------HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC---------CCC--------
T ss_pred cchhcCCCC-------------------CCCHHHHHHHHHHHHHcCCCEEEEecCccccc---------ccc--------
Confidence 211111111 01234555666666777777665543221100 000
Q ss_pred ccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 227 VTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 227 ~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
..+ +....++++++|+.+++||++++||++++++.++++.| ||.|.+|++++.
T Consensus 277 ~~~-----~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 277 PWG-----PAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp CCC-----TTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred CCC-----cchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 001 11124678889988899999999999999999999999 999999999875
No 129
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.48 E-value=3.3e-06 Score=96.16 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=110.7
Q ss_pred CCHHHHHHHHHHhhccC--CCcEEEEe-cCcchhccCHHHHHHHHHHcCCcE--EEec-CCChhhHHHHHHHHHHcCCCe
Q 021527 122 TNFNAILSMLKEVVPQM--SCPIALFT-YYNPILKRGVDNFMSTVRDIGIRG--LVVP-DVPLEETESLQKEAMKNKIEL 195 (311)
Q Consensus 122 ~~~~~~~~~i~~ir~~~--~iPiilm~-Y~n~i~~~g~~~fi~~~~~aGadG--viip-Dlp~ee~~~~~~~~~~~gi~~ 195 (311)
.+.+.+-+.|+++|+.. +.|+++.. |.|+-...-..+.++.+.+.|++- |.+. ..| ..+++.+.++++|+..
T Consensus 618 ~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~gi~~ 695 (2060)
T 2uva_G 618 YNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVP--SIEVANEYIQTLGIRH 695 (2060)
T ss_dssp CSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCC--CHHHHHHHHHHSCCSE
T ss_pred CCHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCC--CHHHHHHHHHHcCCeE
Confidence 34566667888898877 68988854 445432211246678888899887 7764 344 2334566778889998
Q ss_pred EEEeCCCChHH--HHHHHHHhCCceEEEEecCC-ccCCCCCC---CchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHH
Q 021527 196 VLFTTPTTPTD--RMKAIVEASEGFVYLVSSIG-VTGARASI---SGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVA 269 (311)
Q Consensus 196 I~lisp~t~~e--ri~~i~~~a~gfiY~vs~~G-~TG~~~~~---~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~ 269 (311)
+.+++ +..+. +..++.+....++.++-..| -.|...+. .....+++.++++..++||++++||.+++++.+++
T Consensus 696 i~~v~-~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 696 ISFKP-GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp EEECC-CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHH
T ss_pred EEecC-CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHh
Confidence 87654 33322 22334454444444211122 23333332 24567899999999999999999999999999999
Q ss_pred -----------HcCCcEEEEhhHhhchhhh
Q 021527 270 -----------GWGADGVIVGSAMVKLLGE 288 (311)
Q Consensus 270 -----------~~GADGvIVGSaiv~~~~~ 288 (311)
.+|||||.+||.|+-..+.
T Consensus 775 tg~ws~~~g~palGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 775 TGSWSTKFGYPPMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp HTCGGGTTTSCCCCCSCEEESGGGGGBTTS
T ss_pred cCcchhhcCCCCCCCCEEEEchhhhcCcCC
Confidence 9999999999999997753
No 130
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=98.46 E-value=4.3e-06 Score=75.22 Aligned_cols=197 Identities=16% Similarity=0.185 Sum_probs=110.7
Q ss_pred EEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 68 YITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 68 yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
.+-+..++.+...+.++.+. ..++++++|.++ + +..| .+.++++|+..+.++++..-
T Consensus 16 ilAlD~~~~~~a~~~v~~~~-~~v~~~Kvg~~l--------f--------~~~G------~~~v~~l~~~~g~~v~lD~K 72 (228)
T 3m47_A 16 ILAMDLMNRDDALRVTGEVR-EYIDTVKIGYPL--------V--------LSEG------MDIIAEFRKRFGCRIIADFK 72 (228)
T ss_dssp EEECCCCSHHHHHHHHHTTT-TTCSEEEEEHHH--------H--------HHHC------THHHHHHHHHHCCEEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHcC-CcccEEEEcHHH--------H--------HhcC------HHHHHHHHhcCCCeEEEEEe
Confidence 35667899888888887763 349999999543 1 1234 23566666533567777654
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeEEEeCCCChHH-------HHHHHHHh--CCc
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELVLFTTPTTPTD-------RMKAIVEA--SEG 217 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I~lisp~t~~e-------ri~~i~~~--a~g 217 (311)
+.++-.+ .+++++.+.+.|+|.+.++-.. .+-...+.+.++++|.. +++++++++.+ ....+++. ..|
T Consensus 73 l~DipnT-v~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~-v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G 150 (228)
T 3m47_A 73 VADIPET-NEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGRE-VFLLTEMSHPGAEMFIQGAADEIARMGVDLG 150 (228)
T ss_dssp ECSCHHH-HHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCE-EEEECCCCSGGGGTTHHHHHHHHHHHHHHTT
T ss_pred ecccHhH-HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCC-eEEEEeCCCccHHHHHHHHHHHHHHHHHHhC
Confidence 4333211 3568888999999999996433 33356677777777754 55555555431 11222222 234
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCC--CcEEEeeCCCCH-HHHHHHHHcCCcEEEEhhHhhchhhhcCCchh
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESST--KPVAVGFGISKP-EHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE 294 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~--~Pv~vGfGIst~-e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~ 294 (311)
+.-+|. |.. . .+.++++|+.++ .++ +--||+.. .+. ++.+.|||.+|||+++.+. .++.
T Consensus 151 ~~GvV~-----~at---~---~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a----~dp~- 212 (228)
T 3m47_A 151 VKNYVG-----PST---R---PERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA----DNPA- 212 (228)
T ss_dssp CCEEEC-----CSS---C---HHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS----SCHH-
T ss_pred CcEEEE-----CCC---C---hHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC----CCHH-
Confidence 433321 111 1 145777777653 555 54566421 256 7778999999999999873 2343
Q ss_pred HHHHHHHHHHHHHhh
Q 021527 295 GLKELEKFAKSLKSA 309 (311)
Q Consensus 295 ~~~~~~~~~~~l~~~ 309 (311)
+.++++.++++.+
T Consensus 213 --~a~~~~~~~~~~~ 225 (228)
T 3m47_A 213 --AAAAGAIESIKDL 225 (228)
T ss_dssp --HHHHHHHHHC---
T ss_pred --HHHHHHHHHHHHH
Confidence 3444444555443
No 131
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.39 E-value=4.4e-06 Score=82.75 Aligned_cols=138 Identities=19% Similarity=0.243 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccC
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRG 155 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g 155 (311)
..+.+.++.+.++|+|.++++.-+.+| ...++.++++|+.+ ++|+++-+-.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~---------------------~~~~e~i~~i~~~~p~~pvi~g~~~------- 287 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS---------------------RRVIETLEMIKADYPDLPVVAGNVA------- 287 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS---------------------HHHHHHHHHHHHHCTTSCEEEEEEC-------
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch---------------------HHHHHHHHHHHHHCCCceEEeCCcC-------
Confidence 456789999999999999997433221 24567888888876 7998774221
Q ss_pred HHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCC
Q 021527 156 VDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASIS 235 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~ 235 (311)
..+.++.+.++|+|++.+..-+ | +..+ .+. . . |. |.. .
T Consensus 288 t~e~a~~l~~~G~d~I~v~~~~--------------G-------~~~~--~~~--~-~------------~~-g~p---~ 325 (494)
T 1vrd_A 288 TPEGTEALIKAGADAVKVGVGP--------------G-------SICT--TRV--V-A------------GV-GVP---Q 325 (494)
T ss_dssp SHHHHHHHHHTTCSEEEECSSC--------------S-------TTCH--HHH--H-H------------CC-CCC---H
T ss_pred CHHHHHHHHHcCCCEEEEcCCC--------------C-------cccc--ccc--c-C------------CC-Ccc---H
Confidence 1345677888999998874211 1 0011 110 0 0 11 110 0
Q ss_pred chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 236 GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 236 ~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
......+.+.++..++||++.+||++++++.+++..|||+|.+|++|..
T Consensus 326 ~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~ 374 (494)
T 1vrd_A 326 LTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAG 374 (494)
T ss_dssp HHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhc
Confidence 1122234444444689999999999999999999999999999999963
No 132
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=98.35 E-value=3.2e-06 Score=74.01 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=84.0
Q ss_pred HHHHHHHhhccCCCcEEEEec-CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe--CCCC
Q 021527 127 ILSMLKEVVPQMSCPIALFTY-YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT--TPTT 203 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~Y-~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li--sp~t 203 (311)
+-++++.+++. +.|+++..- .+.+-+. +.-++-+...++||+|=.- ......++++|+..|+-+ -.+.
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d--~~ai~fL~~~~pdGIIsTk------~~~i~~Akk~GL~tIqR~FliDs~ 115 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEG--EEAILFVKKAGADGIITIK------PKNYVVAKKNGIPAVLRFFALDSK 115 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSS--HHHHHHHHHHTCSEEEESC------HHHHHHHHHTTCCEEEEEECCSHH
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCC--HHHHHHHHhcCCCEEEcCc------HHHHHHHHHcCCEEeeEEEEEEeH
Confidence 34577777776 888888631 1111110 1222223677899986552 236677899999888633 3222
Q ss_pred h-HHHHHHHHHhCCceEEEEecCCccCCCCCCCch-HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 204 P-TDRMKAIVEASEGFVYLVSSIGVTGARASISGH-VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 204 ~-~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~-~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
. +..++.+......++-+.. .. ..+.++++ +++|+++|++|+++|++.+ +++|||+|..|+.
T Consensus 116 al~~~~~~I~~~kPD~iEiLP------------g~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~ 179 (188)
T 1vkf_A 116 AVERGIEQIETLGVDVVEVLP------------GAVAPKVARKI---PGRTVIAAGLVETEEEARE-ILKHVSAISTSSR 179 (188)
T ss_dssp HHHHHHHHHHHHTCSEEEEES------------GGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCH
T ss_pred HHhhhhhhccccCCCeEeecC------------CCchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCH
Confidence 2 2334555455566654441 11 23566666 7899999999999999999 9999999999863
No 133
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.31 E-value=1.3e-05 Score=76.61 Aligned_cols=134 Identities=20% Similarity=0.164 Sum_probs=86.3
Q ss_pred HHHHHHHHHC--CCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 80 AEALKLLDSC--GSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 80 ~e~~~~L~~~--GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
.+.++.+.+. |+|++++...+.+| ...++.++++|+.+ ++|+++-+-.+
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g~~---------------------~~~~~~i~~lr~~~~~~~vi~g~v~t------- 171 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANGYS---------------------EHFVEFVKDVRKRFPQHTIMAGNVVT------- 171 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTB---------------------HHHHHHHHHHHHHCTTSEEEEEEECS-------
T ss_pred HHHHHHHHhccCCCCEEEEEecCCCc---------------------HHHHHHHHHHHHhcCCCeEEEEeCCC-------
Confidence 4566777776 99999986554322 23467888888887 88988643211
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCC-
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASIS- 235 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~- 235 (311)
.+..+.+.++|+|+|++.--+ |- + .+ .|. . . |. | .+
T Consensus 172 ~e~A~~a~~aGaD~I~v~~g~--------------G~--~-----~~--~r~--~-~------------g~-~----~p~ 208 (351)
T 2c6q_A 172 GEMVEELILSGADIIKVGIGP--------------GS--V-----CT--TRK--K-T------------GV-G----YPQ 208 (351)
T ss_dssp HHHHHHHHHTTCSEEEECSSC--------------ST--T-----BC--HHH--H-H------------CB-C----CCH
T ss_pred HHHHHHHHHhCCCEEEECCCC--------------Cc--C-----cC--ccc--c-C------------CC-C----ccH
Confidence 356778899999998774111 00 0 01 110 0 0 10 1 11
Q ss_pred chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 236 GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 236 ~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
......+.+..+..++||++.+||.++.++.+.+.+|||+|.+|+.|..
T Consensus 209 ~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 209 LSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 257 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhc
Confidence 1111223333333579999999999999999999999999999999985
No 134
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.27 E-value=2.3e-05 Score=73.45 Aligned_cols=177 Identities=15% Similarity=0.140 Sum_probs=107.1
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+-+..|+.++..++++.+. ..++++++|.|+ + +..| .+.++++++..+.+|++..-+
T Consensus 29 VALD~~~~~eal~l~~~l~-~~v~~vKVG~~l---------f-------~~~G------~~~V~~Lk~~~g~~IflDlKl 85 (303)
T 3ru6_A 29 VALDLSTKEECLQLAKELK-NLDIWLKVGLRA---------Y-------LRDG------FKFIEELKKVDDFKIFLDLKF 85 (303)
T ss_dssp EECCCSSHHHHHHHHHHTT-TSSCEEEECHHH---------H-------HHHT------HHHHHHHHHHCCCEEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhC-CCccEEEeCHHH---------H-------HHhC------HHHHHHHHHhhCCCEEEEeee
Confidence 5667889999999999976 459999999655 1 1122 346667766557788887655
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCC-eEEEe---CCCChHHHH------------HHH
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNKIE-LVLFT---TPTTPTDRM------------KAI 211 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~-~I~li---sp~t~~eri------------~~i 211 (311)
.++-.+ ....++.+.+.|+|.+.+.-.. .+-...+.+.++++|-. .++.+ +..+ .+.+ ..+
T Consensus 86 ~DIpnT-v~~av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s-~~~l~~l~~~~~~e~V~~l 163 (303)
T 3ru6_A 86 HDIPNT-MADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFD-EENFFSIYRQKIEEAVINF 163 (303)
T ss_dssp CSCHHH-HHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCC-HHHHHHHHSSCHHHHHHHH
T ss_pred ccCchh-HHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCC-HHHHHHHHcCCHHHHHHHH
Confidence 433221 2456777888999999996432 23344456666655522 22222 2222 2211 112
Q ss_pred HHh--CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHH----------HHHHHHHcCCcEEEE
Q 021527 212 VEA--SEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPE----------HVQQVAGWGADGVIV 278 (311)
Q Consensus 212 ~~~--a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e----------~v~~v~~~GADGvIV 278 (311)
++. ..|..++|. + +. .++++|+.+ +-.++|--||+-.. ++.++.++|||.+||
T Consensus 164 A~~a~~~G~dGvV~------s----~~----E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVv 229 (303)
T 3ru6_A 164 SKISYENGLDGMVC------S----VF----ESKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVV 229 (303)
T ss_dssp HHHHHHTTCSEEEC------C----TT----THHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE------C----HH----HHHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEE
Confidence 222 234444332 1 11 156777766 34677878886210 466778899999999
Q ss_pred hhHhhc
Q 021527 279 GSAMVK 284 (311)
Q Consensus 279 GSaiv~ 284 (311)
|++|.+
T Consensus 230 Gr~I~~ 235 (303)
T 3ru6_A 230 GRPIYK 235 (303)
T ss_dssp CHHHHT
T ss_pred ChHHhC
Confidence 999998
No 135
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.27 E-value=1.1e-05 Score=79.72 Aligned_cols=134 Identities=20% Similarity=0.257 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
.+.+.++.+.++|+|.|+++. +.| ..+..++.++++++.+ ++|++.-.. ..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~------a~g---------------~~~~~~~~i~~l~~~~p~~pvi~G~v-------~t 284 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDT------AHG---------------HSAGVLRKIAEIRAHFPNRTLIAGNI-------AT 284 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECC------SCT---------------TCHHHHHHHHHHHHHCSSSCEEEEEE-------CS
T ss_pred hHHHHHHHHHHcCCCeEEEee------ecC---------------cchhHHHHHHHHHHHCCCCcEeCCCc-------cC
Confidence 457888999999999999983 112 1234567888888887 899884322 12
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+.++.+.++|+|++.+.--+ | +-.+. |. . .|. |. +
T Consensus 285 ~~~a~~~~~~Gad~I~vg~g~--------------g-------~~~~t--r~--~-------------~~~-~~----p- 320 (491)
T 1zfj_A 285 AEGARALYDAGVDVVKVGIGP--------------G-------SICTT--RV--V-------------AGV-GV----P- 320 (491)
T ss_dssp HHHHHHHHHTTCSEEEECSSC--------------C-------TTBCH--HH--H-------------TCC-CC----C-
T ss_pred HHHHHHHHHcCCCEEEECccC--------------C-------cceEE--ee--e-------------cCC-CC----C-
Confidence 467778889999998764111 1 00011 11 0 011 11 1
Q ss_pred hHHHHHHHHhh---cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 237 HVQTLLREIKE---SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 237 ~~~~~l~~vk~---~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.+.++.+ ..++||++.+||++++|+.+++..|||+|++|++|..
T Consensus 321 -~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 321 -QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAG 370 (491)
T ss_dssp -HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred -cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhC
Confidence 1123333333 3589999999999999999999999999999999984
No 136
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=98.25 E-value=4.8e-05 Score=71.67 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=87.0
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec-----------CCChhhHHHHHHHHHHcCCCeEEE-eCCCChH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP-----------DVPLEETESLQKEAMKNKIELVLF-TTPTTPT 205 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip-----------Dlp~ee~~~~~~~~~~~gi~~I~l-isp~t~~ 205 (311)
.+.|++..-....++.+..+.+.+.+...|++++.+. |..++...+..+.+++.++.++.- +.+..+.
T Consensus 116 ~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~ 195 (332)
T 1vcf_A 116 PKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSR 195 (332)
T ss_dssp SSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCH
T ss_pred CCceeecccChhhhhccChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCH
Confidence 5788765433222333445556665566688876431 111111234444444455554443 3333444
Q ss_pred HHHHHHHHhCCceEEE-EecCCccC-C-----CC----------CCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHH
Q 021527 206 DRMKAIVEASEGFVYL-VSSIGVTG-A-----RA----------SISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQ 267 (311)
Q Consensus 206 eri~~i~~~a~gfiY~-vs~~G~TG-~-----~~----------~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~ 267 (311)
+..+... ..|..++ ++..|.|. . +. .......+.+.++++.+ ++||++.+||++++++.+
T Consensus 196 e~a~~~~--~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k 273 (332)
T 1vcf_A 196 EAALALR--DLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAK 273 (332)
T ss_dssp HHHHHHT--TSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHH
T ss_pred HHHHHHH--HcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHH
Confidence 4443332 3455555 34333221 0 11 11223456788888877 799999999999999999
Q ss_pred HHHcCCcEEEEhhHhhchh
Q 021527 268 VAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 268 v~~~GADGvIVGSaiv~~~ 286 (311)
++..|||+|-+|++++..+
T Consensus 274 al~~GAd~V~igr~~l~~~ 292 (332)
T 1vcf_A 274 ALALGADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHTCSEEEECGGGHHHH
T ss_pred HHHhCCChHhhhHHHHHHH
Confidence 9999999999999999766
No 137
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=6.5e-05 Score=70.29 Aligned_cols=187 Identities=12% Similarity=0.117 Sum_probs=114.3
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..++.++.+.+.|||+|-+|... +.-|.+ .. ++.++..++.+++..++||.+.+|-
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~--~~v~~~---ee----------m~rvv~~i~~~~~~~~vpisIDT~~------ 93 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDD--GLLDAR---TE----------MTTFLNLIMSEPEIARVPVMIDSSK------ 93 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCC--TTSCHH---HH----------HHHHHHHHHTCHHHHTSCEEEECSC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC--CCCCHH---HH----------HHHHHHHHHHhhhcCCCeEEEeCCC------
Confidence 45788999999999999999999732 222321 11 1234556665555678999999873
Q ss_pred CHHHHHHHHHH--cCCcEEEecCCChh----hHHHHHHHHHHcCCCeEEEeC-----CCChHHHH------HHHHHhCCc
Q 021527 155 GVDNFMSTVRD--IGIRGLVVPDVPLE----ETESLQKEAMKNKIELVLFTT-----PTTPTDRM------KAIVEASEG 217 (311)
Q Consensus 155 g~~~fi~~~~~--aGadGviipDlp~e----e~~~~~~~~~~~gi~~I~lis-----p~t~~eri------~~i~~~a~g 217 (311)
.+-++.+.+ +|++ |+.|+..+ +..++.+.++++|..+|.+.. |.|.++|+ .+.+....|
T Consensus 94 --~~V~eaaL~~~~Ga~--iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~G 169 (300)
T 3k13_A 94 --WEVIEAGLKCLQGKS--IVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVG 169 (300)
T ss_dssp --HHHHHHHHHHCSSCC--EEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHhcCCCC--EEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 234555655 6876 56776654 234678899999998777653 66665543 222112346
Q ss_pred e----EEEEecCCccCCCCCC----CchHHHHHHHHhhcC-CCcEEEe-----eCCCC----HHH-----HHHHHHcCCc
Q 021527 218 F----VYLVSSIGVTGARASI----SGHVQTLLREIKESS-TKPVAVG-----FGISK----PEH-----VQQVAGWGAD 274 (311)
Q Consensus 218 f----iY~vs~~G~TG~~~~~----~~~~~~~l~~vk~~~-~~Pv~vG-----fGIst----~e~-----v~~v~~~GAD 274 (311)
+ |++-...|.-|....- +..+.+.++++|+.. +.|+.+| ||... .+- +....+.|.|
T Consensus 170 i~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld 249 (300)
T 3k13_A 170 FNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMD 249 (300)
T ss_dssp CCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 5 7776655533322111 223455566677555 8899886 77742 111 2234578999
Q ss_pred EEEEhhHhhchh
Q 021527 275 GVIVGSAMVKLL 286 (311)
Q Consensus 275 GvIVGSaiv~~~ 286 (311)
.+||=..=...+
T Consensus 250 ~~Ivn~~~~~~~ 261 (300)
T 3k13_A 250 MGIVNPGTSVLY 261 (300)
T ss_dssp EEEECCC-CCCG
T ss_pred EEecCcchhhHH
Confidence 999965433333
No 138
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=98.22 E-value=4e-05 Score=73.93 Aligned_cols=167 Identities=17% Similarity=0.207 Sum_probs=107.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhcc
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKR 154 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~~ 154 (311)
.++-+++++.|++.|+|.||+|+|-..| +.++.++.+++. .+.++..+. .
T Consensus 24 ~~~k~~ia~~L~~~Gv~~IE~g~p~~~~----------------------~~~~~~~~i~~~~~~~~v~~~~-------r 74 (382)
T 2ztj_A 24 TQDKVEIAKALDEFGIEYIEVTTPVASP----------------------QSRKDAEVLASLGLKAKVVTHI-------Q 74 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCTTSCH----------------------HHHHHHHHHHTSCCSSEEEEEE-------E
T ss_pred HHHHHHHHHHHHHcCcCEEEEcCCcCCH----------------------HHHHHHHHHHhcCCCcEEEEEc-------c
Confidence 4778999999999999999999876543 113455555543 344444332 2
Q ss_pred CHHHHHHHHHHcCCcEEEecCC-----------Ch----hhHHHHHHHHHHcC--CCeEEEeC--CCChHHHHHHHHHhC
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDV-----------PL----EETESLQKEAMKNK--IELVLFTT--PTTPTDRMKAIVEAS 215 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDl-----------p~----ee~~~~~~~~~~~g--i~~I~lis--p~t~~eri~~i~~~a 215 (311)
+..+-++.+.++|++.+-+.+- .. +...+..+.++++| ++..+... +.++.+.+.++++..
T Consensus 75 ~~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 75 CRLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp SCHHHHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHH
T ss_pred cChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 2345588899999998877431 12 33566778889999 77555432 333344444443321
Q ss_pred ---CceEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEE----eeCCCCHHHHHHHHHcCCcEEE
Q 021527 216 ---EGFVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAV----GFGISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 216 ---~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~v----GfGIst~e~v~~v~~~GADGvI 277 (311)
-..+++....|. ..|..+.++++.+++. .++|+-+ .+|... .+.-..+++|||.|=
T Consensus 155 ~~~a~~i~l~DT~G~-----~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAv-AN~laAv~aGa~~vd 219 (382)
T 2ztj_A 155 APYVDRVGLADTVGV-----ATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAI-ANAYEAIEAGATHVD 219 (382)
T ss_dssp GGGCSEEEEEETTSC-----CCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHH-HHHHHHHHTTCCEEE
T ss_pred HHhcCEEEecCCCCC-----CCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHH-HHHHHHHHhCCCEEE
Confidence 334555554443 3467788999999987 6778766 366664 455566779999773
No 139
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=98.21 E-value=0.0001 Score=69.03 Aligned_cols=204 Identities=16% Similarity=0.196 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH--cCCCHHH
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA--RGTNFNA 126 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~--~G~~~~~ 126 (311)
.-.+.|.++++++++ +..+++=|+ -.++.++++|+|+|=+| |--+..+ ..+. ..+++++
T Consensus 16 ~~a~~lr~l~~~~~~--i~~~~ayD~------~sA~l~e~aG~dai~vs---------~~s~a~~--~G~pD~~~vt~~e 76 (305)
T 3ih1_A 16 ELANRFRALVEANEI--LQIPGAHDA------MAALVARNTGFLALYLS---------GAAYTAS--KGLPDLGIVTSTE 76 (305)
T ss_dssp HHHHHHHHHHHSSSC--EEEEBCSSH------HHHHHHHHTTCSCEEEC---------HHHHHHH--HTCCSSSCSCHHH
T ss_pred HHHHHHHHHHhCCCc--EEEecCcCH------HHHHHHHHcCCCEEEEC---------cHHHHHh--CCCCCCCcCCHHH
Confidence 345678888877764 334455444 45667788999999997 4222211 1111 1158999
Q ss_pred HHHHHHHhhccCCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhHHHHHHHH
Q 021527 127 ILSMLKEVVPQMSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEETESLQKEA 188 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~~~~~~~~ 188 (311)
.+..++.|.+.+++||++. +|-|+. ...+-++.+.++|++||.+=|- |.+|..+-.+.+
T Consensus 77 m~~~~~~I~r~~~~pviaD~d~Gyg~~~---~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa 153 (305)
T 3ih1_A 77 VAERARDLVRATDLPVLVDIDTGFGGVL---NVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAI 153 (305)
T ss_dssp HHHHHHHHHHHHCCCEEEECTTCSSSHH---HHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCHH---HHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHH
Confidence 9999999988788999886 454432 1345567788899999999663 335655545555
Q ss_pred HHcCCCeEEEeCCCC--------hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEe---e
Q 021527 189 MKNKIELVLFTTPTT--------PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVG---F 257 (311)
Q Consensus 189 ~~~gi~~I~lisp~t--------~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG---f 257 (311)
++.|.+.++..--.. ..+|.+.+.+..-..||+.+ + + + .+.++++.+..++|+++. +
T Consensus 154 ~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~---~-------~-~-~~~~~~i~~~~~~P~~~n~~~~ 221 (305)
T 3ih1_A 154 KEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEA---L-------Q-S-EEEFRLFNSKVNAPLLANMTEF 221 (305)
T ss_dssp HHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETT---C-------C-S-HHHHHHHHHHSCSCBEEECCTT
T ss_pred HHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcC---C-------C-C-HHHHHHHHHHcCCCEEEeecCC
Confidence 555877555432111 12566666665455566532 1 1 1 356788877778998753 4
Q ss_pred CCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 258 GISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 258 GIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
|-+-.-+++++.++|..-|+.|..+.+..
T Consensus 222 g~tp~~~~~eL~~lGv~~v~~~~~~~raa 250 (305)
T 3ih1_A 222 GKTPYYSAEEFANMGFQMVIYPVTSLRVA 250 (305)
T ss_dssp SSSCCCCHHHHHHTTCSEEEECSHHHHHH
T ss_pred CCCCCCCHHHHHHcCCCEEEEchHHHHHH
Confidence 53211246788889999999998888754
No 140
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.21 E-value=5.4e-06 Score=77.77 Aligned_cols=154 Identities=18% Similarity=0.261 Sum_probs=97.5
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcC----CCHHHHHHHHHHhhccCC
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG----TNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G----~~~~~~~~~i~~ir~~~~ 139 (311)
.++.=|. | .+.+.+.+.++.+.++ +|.|||..- .|.. .+ +.-+.| .+.+.+.++++.+++.++
T Consensus 60 ~~~~QL~-g-~~~~~~~~aa~~a~~~-~d~Iein~g--cP~~---~~-----r~~~~G~~l~~~~~~~~eiv~~v~~~~~ 126 (318)
T 1vhn_A 60 NVAVQIF-G-SEPNELSEAARILSEK-YKWIDLNAG--CPVR---KV-----VKEGAGGALLKDLRHFRYIVRELRKSVS 126 (318)
T ss_dssp TEEEEEE-C-SCHHHHHHHHHHHTTT-CSEEEEEEC--CCCH---HH-----HHTTCGGGGGSCHHHHHHHHHHHHHHCS
T ss_pred eEEEEeC-C-CCHHHHHHHHHHHHHh-CCEEEEECC--CCcH---hc-----CCCCcccchhhCHHHHHHHHHHHHHhhC
Confidence 4555444 3 2458999999999999 999999432 2210 11 111122 255677889999998888
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+||.+-.-.. +..-...++++.+.++|+|+|++..- +.. .
T Consensus 127 ~pv~vKir~G-~~~~~~~~~a~~l~~~G~d~i~v~g~--------------------------~~~----------~--- 166 (318)
T 1vhn_A 127 GKFSVKTRLG-WEKNEVEEIYRILVEEGVDEVFIHTR--------------------------TVV----------Q--- 166 (318)
T ss_dssp SEEEEEEESC-SSSCCHHHHHHHHHHTTCCEEEEESS--------------------------CTT----------T---
T ss_pred CCEEEEecCC-CChHHHHHHHHHHHHhCCCEEEEcCC--------------------------Ccc----------c---
Confidence 9998863110 00001125666666666666665421 100 0
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhhHhhc
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAG-WGADGVIVGSAMVK 284 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGSaiv~ 284 (311)
+.+|. .. .+.++++++ ++||++.+||.|++++.++++ .|||+|.+|++++.
T Consensus 167 ------~~~~~-----~~-~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~ 218 (318)
T 1vhn_A 167 ------SFTGR-----AE-WKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG 218 (318)
T ss_dssp ------TTSSC-----CC-GGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTT
T ss_pred ------cCCCC-----cC-HHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHh
Confidence 01111 11 145777777 899999999999999999998 69999999998654
No 141
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.21 E-value=5.1e-05 Score=72.24 Aligned_cols=151 Identities=16% Similarity=0.207 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHCCCCEEEEc-----------CCCCCCCCChHHHHHHHHHHHHcCCCH----HHHHHHHHHhhccC--CC
Q 021527 78 TTAEALKLLDSCGSDIIELG-----------VPYSDPLADGPVIQAAATRSLARGTNF----NAILSMLKEVVPQM--SC 140 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG-----------~PfsDP~aDGp~Iq~a~~~Al~~G~~~----~~~~~~i~~ir~~~--~i 140 (311)
.+.+.++.+.++|.|+|||- -|.++---| +.|-++ +-.+++++.+|+.+ +.
T Consensus 144 ~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D------------~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 144 AFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKD------------EYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCS------------TTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred HHHHHHhhccccCCceEEEecccchhHHHhhcccccccch------------hhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 57888888999999999995 333322223 122222 23477888888886 67
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
||.+-.-.+... + + ..+.++..++.+.+.+. ++.+-+....+... .
T Consensus 212 pv~vRls~~~~~--------~-------~-----g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~---------~---- 257 (343)
T 3kru_A 212 PIFVRVSADDYM--------E-------G-----GINIDMMVEYINMIKDK-VDLIDVSSGGLLNV---------D---- 257 (343)
T ss_dssp CEEEEEECCCSS--------T-------T-----SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCC---------C----
T ss_pred CeEEEeechhhh--------c-------c-----CccHHHHHHHHHHhhcc-ccEEeccCCceEee---------e----
Confidence 888853221110 0 1 13456666677777776 77665543222100 0
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.. ..+....++++++|+.+++||++.+||++++++.++++.| ||.|.+|.+++.
T Consensus 258 ------~~----~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 258 ------IN----LYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp ------CC----CCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ------ec----ccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 00 0011124678889998899999999999999999999998 999999999875
No 142
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.20 E-value=2.8e-05 Score=74.48 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=95.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCChHHHHHHHHHHHHcCCCH----HHHHHHHHHhhccCCC-
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLADGPVIQAAATRSLARGTNF----NAILSMLKEVVPQMSC- 140 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aDGp~Iq~a~~~Al~~G~~~----~~~~~~i~~ir~~~~i- 140 (311)
+.+.+.++.+.++|+|+|||-. |.++---| +.|-++ +-.+++++.+|+.+.-
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D------------~yGGslenr~r~~~eiv~avr~~vg~~ 228 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSD------------EYGGSLENRLRFLDEVVAALVDAIGAE 228 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCS------------TTSSSHHHHTHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCc------------ccCcchhhhHHHHHHHHHHHHHHcCCC
Confidence 5788888889999999999943 43222222 122222 2346777888876532
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
||.+-.-.+..+. |.+ ...+.++..++.+.+.+.|++.+-+...+.. +
T Consensus 229 pv~vris~~~~~~-------------~~~----~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~------------~--- 276 (365)
T 2gou_A 229 RVGVRLAPLTTLN-------------GTV----DADPILTYTAAAALLNKHRIVYLHIAEVDWD------------D--- 276 (365)
T ss_dssp GEEEEECSSCCTT-------------SCC----CSSHHHHHHHHHHHHHHTTCSEEEEECCBTT------------B---
T ss_pred cEEEEEccccccC-------------CCC----CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC------------C---
Confidence 8877321110000 000 0123455666677777777776665443210 0
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.. ..+ .++++++|+.+++||++.+|| +++++.++++.| ||+|-+|++++.
T Consensus 277 ------~~----~~~---~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 277 ------AP----DTP---VSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp ------CC----CCC---HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred ------CC----Ccc---HHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 00 111 257889999999999999999 799999999998 999999999886
No 143
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.18 E-value=3.7e-05 Score=73.64 Aligned_cols=152 Identities=18% Similarity=0.220 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-Cc
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iP 141 (311)
+.+.+.++.+.++|+|+|||-. |.++---| |. +.+- .+-.+++++.+|+.+. -|
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGs-lenr----------~r~~~eiv~avr~~vg~~~ 229 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGS-VENR----------ARLVLEVVDAVCNEWSADR 229 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHH----------THHHHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcc-hhcC----------hhhHHHHHHHHHHhcCCCc
Confidence 4788888889999999999932 55332233 32 2211 1234678888887763 28
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
|.+-.-.+..+. |. | -...+.++..++.+.+.+.|++.+-+...+.. ..
T Consensus 230 v~vrls~~~~~~-~~----------~-----~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-----------~~---- 278 (364)
T 1vyr_A 230 IGIRVSPIGTFQ-NV----------D-----NGPNEEADALYLIEELAKRGIAYLHMSETDLA-----------GG---- 278 (364)
T ss_dssp EEEEECCSSCBT-TB----------C-----CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT-----------BC----
T ss_pred EEEEEccccccc-cc----------c-----CCCCCHHHHHHHHHHHHHhCCCEEEEecCccc-----------CC----
Confidence 877321110010 00 0 00113345556666667777776655433210 00
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
. ..+ .++++++|+.+++||++++|| +++++.++++.| ||+|-+|.+++.
T Consensus 279 ------~----~~~---~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 279 ------K----PYS---EAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp ------C----CCC---HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ------C----ccc---HHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 0 011 357889999999999999999 799999999998 999999999875
No 144
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=98.17 E-value=5.6e-05 Score=71.42 Aligned_cols=198 Identities=16% Similarity=0.217 Sum_probs=127.4
Q ss_pred hhHHHHHHHHH-HCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccC
Q 021527 77 STTAEALKLLD-SCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRG 155 (311)
Q Consensus 77 ~~~~e~~~~L~-~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g 155 (311)
+...++++.+. +.|||+|-||...++|-++. ++.++..+.++++++.+++|+.+.|.-|+-+.
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~--------------vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~-- 143 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGAN--------------HSVDQCVATVKEVLQAVGVPLVVVGCGDVEKD-- 143 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTC--------------CCHHHHHHHHHHHHHHCCSCEEEECCSCHHHH--
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCC--------------CCHHHHHHHHHHHHhhCCceEEEECCCCCCCC--
Confidence 45789999998 99999999999999995442 45556667888888889999999966564433
Q ss_pred HHHHHHHHHHcCCcE-EEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHH--hCCce----EEEEecCCcc
Q 021527 156 VDNFMSTVRDIGIRG-LVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVE--ASEGF----VYLVSSIGVT 228 (311)
Q Consensus 156 ~~~fi~~~~~aGadG-viipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~--~a~gf----iY~vs~~G~T 228 (311)
.+-++.+.++|++. -++.|+..+...++.+.+++||..+|.+ +|.. .+.++++.+ ...|+ |++-...|.-
T Consensus 144 -~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlm-h~~d-~~~~~~l~~~a~~~GI~~e~IIlDPg~g~f 220 (323)
T 4djd_D 144 -HEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIAR-SPLD-INICKQLNILINEMNLPLDHIVIDPSIGGL 220 (323)
T ss_dssp -HHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEE-CSSC-HHHHHHHHHHHHTTTCCGGGEEEECCCCCT
T ss_pred -HHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEE-ccch-HHHHHHHHHHHHHcCCCHHHEEEeCCCccc
Confidence 34667788888763 2455555444456778889999876665 4533 233333322 24455 7776665544
Q ss_pred CCCCCCCchHHHHHHHHhh-------cCCCcEEEeeCC---CCH--------------H----------HHHHHHHcCCc
Q 021527 229 GARASISGHVQTLLREIKE-------SSTKPVAVGFGI---SKP--------------E----------HVQQVAGWGAD 274 (311)
Q Consensus 229 G~~~~~~~~~~~~l~~vk~-------~~~~Pv~vGfGI---st~--------------e----------~v~~v~~~GAD 274 (311)
|.. .....+.++++|. ..+.|+++|-.- ... + .+..++..|+|
T Consensus 221 gk~---~e~~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~~~ 297 (323)
T 4djd_D 221 GYG---IEYSFSIMERIRLGALQGDKMLSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAGAH 297 (323)
T ss_dssp TTT---HHHHHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTTCS
T ss_pred cCC---HHHHHHHHHHHHHHhhcccccCCCCEEEecchhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhcCC
Confidence 432 1234566777764 358999998421 001 0 12334456677
Q ss_pred EEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 275 GVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 275 GvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
.+|+ + ..+.++.++++++.|..
T Consensus 298 i~v~-----~-------~p~~~~~~~~~~~~l~~ 319 (323)
T 4djd_D 298 ILLM-----R-------HPEAVARVKENIDQLMV 319 (323)
T ss_dssp EEEE-----C-------CHHHHHHHHHHHHHHTS
T ss_pred EEEE-----c-------CHHHHHHHHHHHHHHhh
Confidence 7765 1 13567788888887753
No 145
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=98.16 E-value=3e-05 Score=73.23 Aligned_cols=166 Identities=19% Similarity=0.221 Sum_probs=102.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhcc
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILKR 154 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~~ 154 (311)
.++-+++++.|.+.|+|.||+|+|.+.| .+ ++.++++++. .+..+..++-.|
T Consensus 27 ~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~---~d-------------------~e~v~~i~~~~~~~~i~~l~r~~----- 79 (325)
T 3eeg_A 27 TEEKIIVAKALDELGVDVIEAGFPVSSP---GD-------------------FNSVVEITKAVTRPTICALTRAK----- 79 (325)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEECTTSCH---HH-------------------HHHHHHHHHHCCSSEEEEECCSC-----
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCH---hH-------------------HHHHHHHHHhCCCCEEEEeecCC-----
Confidence 4677899999999999999999987655 10 1344454443 345565554333
Q ss_pred CHHHHHHHHHHc----CCcEEEecC------------CC----hhhHHHHHHHHHHcCCCeEEEeC--CCChHHHHHHHH
Q 021527 155 GVDNFMSTVRDI----GIRGLVVPD------------VP----LEETESLQKEAMKNKIELVLFTT--PTTPTDRMKAIV 212 (311)
Q Consensus 155 g~~~fi~~~~~a----GadGviipD------------lp----~ee~~~~~~~~~~~gi~~I~lis--p~t~~eri~~i~ 212 (311)
.++++.+.++ |++.|.+.+ .. ++...+..+.++++|+.+.+... ..++.+.+.+++
T Consensus 80 --~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~ 157 (325)
T 3eeg_A 80 --EADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMV 157 (325)
T ss_dssp --HHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHH
T ss_pred --HHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHH
Confidence 4566666665 999876632 11 13355677889999987655431 123345544444
Q ss_pred Hh----CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC----CcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 213 EA----SEGFVYLVSSIGVTGARASISGHVQTLLREIKESST----KPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 213 ~~----a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~----~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
+. .-..+++.. +.|. ..|..+.++++.+++.++ +|+-+ .+|... .+....+++|||.|
T Consensus 158 ~~~~~~G~~~i~l~D---T~G~--~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~-AN~laA~~aGa~~v 227 (325)
T 3eeg_A 158 EAVIEAGADVVNIPD---TTGY--MLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLAT-ANSLAALQNGARQV 227 (325)
T ss_dssp HHHHHHTCSEEECCB---SSSC--CCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHH-HHHHHHHHHTCCEE
T ss_pred HHHHhcCCCEEEecC---ccCC--cCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHH-HHHHHHHHhCCCEE
Confidence 42 223344444 4444 356778899999998764 56654 345543 45666677999876
No 146
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.16 E-value=4.6e-05 Score=78.00 Aligned_cols=159 Identities=16% Similarity=0.149 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEc--C---------CCCCCCCC--hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 77 STTAEALKLLDSCGSDIIELG--V---------PYSDPLAD--GPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG--~---------PfsDP~aD--Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
+.+.+.++.+.++|.|.|||- . |.++---| |--+.+- .+-.+++++.+|+.+ +.|
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r----------~r~~~eiv~avr~~vG~~~~ 210 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNR----------MRFAVEVVRAVRERVGNDFI 210 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHH----------HHHHHHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHH----------HHHHHHHHHHHHHHcCCCce
Confidence 468888999999999999993 2 44433333 1112211 233577888888875 678
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-.-.+.... ...+.++..++.+.+.+.|++.+-+.. .+.+.+ +
T Consensus 211 v~vrls~~~~~~--------------------~g~~~~~~~~~a~~l~~~g~d~i~v~~-~~~~~~----------~--- 256 (671)
T 1ps9_A 211 IIYRLSMLDLVE--------------------DGGTFAETVELAQAIEAAGATIINTGI-GWHEAR----------I--- 256 (671)
T ss_dssp EEEEEEEECCST--------------------TCCCHHHHHHHHHHHHHHTCSEEEEEE-CBTTCS----------S---
T ss_pred EEEEECccccCC--------------------CCCCHHHHHHHHHHHHhcCCCEEEcCC-Cccccc----------c---
Confidence 766321111100 012345555666666667776654422 110000 0
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.+.....-+....++++++|+.+++||++.+||.+++++.++++.| ||+|-+|+++..
T Consensus 257 -----~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 257 -----PTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp -----CSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred -----ccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHh
Confidence 0000000011234678999999999999999999999999999998 999999999885
No 147
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=98.14 E-value=0.00013 Score=68.33 Aligned_cols=172 Identities=15% Similarity=0.164 Sum_probs=109.6
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+.-+++++.|++.|+|.||+|.| +.|-.- |... ..+ +.++.+++..++++..+. .|
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~~-~~~~~~-p~~~-----------d~~---~~~~~~~~~~~~~~~~l~-~~----- 83 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITSF-VHPKWI-PALR-----------DAI---DVAKGIDREKGVTYAALV-PN----- 83 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEEC-SCTTTC-GGGT-----------THH---HHHHHSCCCTTCEEEEEC-CS-----
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCC-cCcccc-cccC-----------CHH---HHHHHhhhcCCCeEEEEe-CC-----
Confidence 5688899999999999999999974 344211 1110 111 244555544566666654 23
Q ss_pred CHHHHHHHHHHcCCcEEEecCCC------------h----hhHHHHHHHHHHcCCCeEEEeC-----C---CChHHHHHH
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVP------------L----EETESLQKEAMKNKIELVLFTT-----P---TTPTDRMKA 210 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp------------~----ee~~~~~~~~~~~gi~~I~lis-----p---~t~~eri~~ 210 (311)
.+-++.+.++|++.+.+.+-. . +...+..+.++++|+++-..++ | .++.+.+.+
T Consensus 84 --~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~ 161 (307)
T 1ydo_A 84 --QRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIR 161 (307)
T ss_dssp --HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHH
T ss_pred --HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHH
Confidence 356788889999998875311 1 2346678888999987543221 2 133444433
Q ss_pred HH----HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 211 IV----EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 211 i~----~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
++ +..-..+++....|. ..|..+.++++.+++.. ++|+-+ .+|... .+....+++||+.|
T Consensus 162 ~~~~~~~~Ga~~i~l~DT~G~-----~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~-AN~laAv~aGa~~v 230 (307)
T 1ydo_A 162 LSEALFEFGISELSLGDTIGA-----ANPAQVETVLEALLARFPANQIALHFHDTRGTAL-ANMVTALQMGITVF 230 (307)
T ss_dssp HHHHHHHHTCSCEEEECSSCC-----CCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHH-HHHHHHHHHTCCEE
T ss_pred HHHHHHhcCCCEEEEcCCCCC-----cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH-HHHHHHHHhCCCEE
Confidence 33 334445777765543 34677899999999987 578766 466664 45666778999877
No 148
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=98.14 E-value=2.8e-05 Score=69.20 Aligned_cols=166 Identities=17% Similarity=0.177 Sum_probs=98.5
Q ss_pred CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcc
Q 021527 71 AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNP 150 (311)
Q Consensus 71 ~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~ 150 (311)
...|+.+...++++.+.+. +++++|.||=. .|| +.++++|+. +.++++..-+.+
T Consensus 16 ~D~~~~~~a~~i~~~~~~~--~~~Kvg~~l~~---~G~--------------------~~v~~l~~~-~~~v~lD~K~~D 69 (213)
T 1vqt_A 16 VLSLDMEDPIRFIDENGSF--EVVKVGHNLAI---HGK--------------------KIFDELAKR-NLKIILDLKFCD 69 (213)
T ss_dssp EEECCSSSHHHHHHHHCCC--SEEEECHHHHT---TCT--------------------HHHHHHHTT-TCEEEEEEEECS
T ss_pred CCCCCHHHHHHHHHHhCCC--CEEEECHHHHh---hCH--------------------HHHHHHHHC-CCCEEEEeeccc
Confidence 3568889999999999554 88999987722 332 256666664 678888765443
Q ss_pred hhccCHHHHHHHHHHcCCcEEEecCC-ChhhHHHHHHHHHHcCCCeEEEeCCCChH-----HHHHHHHHh-CCceEEEEe
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVPDV-PLEETESLQKEAMKNKIELVLFTTPTTPT-----DRMKAIVEA-SEGFVYLVS 223 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviipDl-p~ee~~~~~~~~~~~gi~~I~lisp~t~~-----eri~~i~~~-a~gfiY~vs 223 (311)
+-.+ ....++.+.+.|+|.+.+.-. ..+-...+.+.+ . .....+..-|+. +....+++. ..|+. ++.
T Consensus 70 I~nT-~~~~v~~~~~~GaD~vTvh~~~G~~~l~~~~~~~---~-~~~~~V~~lts~~~~l~~~v~~~a~~~e~G~d-vV~ 143 (213)
T 1vqt_A 70 IPST-VERSIKSWDHPAIIGFTVHSCAGYESVERALSAT---D-KHVFVVVKLTSMEGSLEDYMDRIEKLNKLGCD-FVL 143 (213)
T ss_dssp CHHH-HHHHHHHHCCTTEEEEEEEGGGCHHHHHHHHHHC---S-SEEEEECCCTTSCCCHHHHHHHHHHHHHHTCE-EEC
T ss_pred CchH-HHHHHHHHHHCCCCEEEEeccCCHHHHHHHHHhc---C-CCeEEEEEeCCCCHHHHHHHHHHHHHhcCCCE-EEE
Confidence 3222 245677888899999999632 222222333222 2 223333322211 221112111 12444 332
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHH----------HHHHHHcCCcEEEEhhHhhch
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEH----------VQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~----------v~~v~~~GADGvIVGSaiv~~ 285 (311)
+ + +.++++|+.++.| ++-.||+ ++. ..+ .++|||++|||..|.+.
T Consensus 144 -----~------~---~~~~~ir~~~~~~-~v~pGI~-~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a 198 (213)
T 1vqt_A 144 -----P------G---PWAKALREKIKGK-ILVPGIR-MEVKADDQKDVVTLEE-MKGIANFAVLGREIYLS 198 (213)
T ss_dssp -----C------H---HHHHHHTTTCCSC-EEECCBC----------CCBCHHH-HTTTCSEEEESHHHHTS
T ss_pred -----c------H---HHHHHHHHHCCCC-EEECCCC-CCCCccchhhcCCHHH-HHCCCCEEEEChhhcCC
Confidence 0 1 3578888887667 5656886 333 577 89999999999999983
No 149
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.11 E-value=2.5e-05 Score=74.83 Aligned_cols=145 Identities=14% Similarity=0.165 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC--hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC-cEE
Q 021527 78 TTAEALKLLDSCGSDIIELGV-----------PYSDPLAD--GPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC-PIA 143 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD--Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i-Pii 143 (311)
.+.+.++.+.++|.|.|||-. |.++---| |-.+.+- .+-.+++++.+|+.+.- ||.
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR----------~rf~~evv~aVr~~vg~~~v~ 231 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENR----------ARLLLEVVDAAIDVWSAARVG 231 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH----------SHHHHHHHHHHHHHHCGGGEE
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhc----------HHHHHHHHHHHHHHcCCCeEE
Confidence 577888899999999999942 44333333 1112111 12346788888876532 877
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+-.-.+.. .+|+ -...+.++..++.+.+.+.|++.+-+..++
T Consensus 232 vRls~~~~----------------~~g~-~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--------------------- 273 (361)
T 3gka_A 232 VHLAPRGD----------------AHTM-GDSDPAATFGHVARELGRRRIAFLFARESF--------------------- 273 (361)
T ss_dssp EEECTTCC----------------SSSC-CCSCHHHHHHHHHHHHHHTTCSEEEEECCC---------------------
T ss_pred Eecccccc----------------cCCC-CCCCcHHHHHHHHHHHHHcCCCEEEECCCC---------------------
Confidence 74211100 0111 011224556667777778888777655432
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
+|. ++++++|+.+++||++.+|| +++++.++++.| ||+|-+|.+++.
T Consensus 274 ----~~~---------~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 274 ----GGD---------AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp ----STT---------CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ----CCH---------HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 010 24677888888999999999 899999999988 999999999875
No 150
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.10 E-value=3.9e-05 Score=73.87 Aligned_cols=152 Identities=14% Similarity=0.116 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-Cc
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iP 141 (311)
+.+.+.++.+.++|+|+|||-. |.++---| |. +.+- .+-.+++++.+|+.+. -|
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGs-lenR----------~r~~~eiv~aVr~avg~~~ 234 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGS-IENR----------ARFPLEVVDAVAEVFGPER 234 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSS-HHHH----------HHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcc-hhhc----------hHHHHHHHHHHHHHcCCCc
Confidence 5788889899999999999932 55443333 22 2211 2334677888887653 28
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
|.+-.-.+..+. |.+ ...+.++..++.+.+.+.|++.|-+...+.. .. +
T Consensus 235 v~vrls~~~~~~-------------~~~----~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~-~~------------~- 283 (377)
T 2r14_A 235 VGIRLTPFLELF-------------GLT----DDEPEAMAFYLAGELDRRGLAYLHFNEPDWI-GG------------D- 283 (377)
T ss_dssp EEEEECTTCCCT-------------TCC----CSCHHHHHHHHHHHHHHTTCSEEEEECCC-------------------
T ss_pred EEEEeccccccC-------------CCC----CCCCHHHHHHHHHHHHHcCCCEEEEeCCccc-CC------------C-
Confidence 887531110000 110 0123456667777777888887766543311 00 0
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.+. + .++++++|+.+++||++.+|| +++++.++++.| ||+|-+|.+++.
T Consensus 284 ------~~~----~---~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 284 ------ITY----P---EGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp -------CC----C---TTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ------Ccc----h---HHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 010 1 246888899899999999999 599999999998 999999999885
No 151
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.09 E-value=3.9e-05 Score=73.57 Aligned_cols=145 Identities=14% Similarity=0.117 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC--hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-CcEE
Q 021527 78 TTAEALKLLDSCGSDIIELGV-----------PYSDPLAD--GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CPIA 143 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD--Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iPii 143 (311)
.+.+.++.+.++|.|+|||-. |.++---| |--+.+- .+-.+++++.+|+.+. -||.
T Consensus 154 ~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR----------~rf~~eiv~aVr~~vg~~~v~ 223 (362)
T 4ab4_A 154 AYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENR----------ARLLLEVTDAAIEVWGAQRVG 223 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH----------HHHHHHHHHHHHHHHCGGGEE
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhH----------HHHHHHHHHHHHHhcCCCceE
Confidence 577888889999999999942 44333333 1112211 2234677788887643 2877
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+-.-.+.. .+|+ -..-+.++..++.+.+.+.|++.+-+..++
T Consensus 224 vRls~~~~----------------~~g~-~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--------------------- 265 (362)
T 4ab4_A 224 VHLAPRAD----------------AHDM-GDADRAETFTYVARELGKRGIAFICSRERE--------------------- 265 (362)
T ss_dssp EEECTTCC----------------SSSC-CCTTHHHHHHHHHHHHHHTTCSEEEEECCC---------------------
T ss_pred EEeecccc----------------cccc-CCCCcHHHHHHHHHHHHHhCCCEEEECCCC---------------------
Confidence 74311100 0110 001123456667777778888777655432
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
+|. ++++++|+.+++||++.+|+ +++++.++++.| ||+|-+|.+++.
T Consensus 266 ----~~~---------~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 266 ----ADD---------SIGPLIKEAFGGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp ----CTT---------CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ----CCH---------HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 010 24677888888999999999 899999999988 999999998875
No 152
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.09 E-value=4.1e-05 Score=87.11 Aligned_cols=182 Identities=17% Similarity=0.231 Sum_probs=117.3
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC--CcEEEEe-cCcch-hccC
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS--CPIALFT-YYNPI-LKRG 155 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~--iPiilm~-Y~n~i-~~~g 155 (311)
.+.+-+..++|.=++--|-- ..+.+.+-+.|+++|+.++ .|+.+.. |+|+- ....
T Consensus 604 ~~lvaAvsnAGglg~l~~~~---------------------~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~ 662 (2051)
T 2uv8_G 604 PDFVAATTNAGYTIELAGGG---------------------YFSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQWG 662 (2051)
T ss_dssp HHHHHHHHHTTCEEEEEGGG---------------------CCSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHHHH
T ss_pred HHHHHHHHcCCcEEEEccCC---------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhhhh
Confidence 46677777777665543411 1344555567888887554 6887763 55652 2111
Q ss_pred HHHHHHHHHHcCCcE--EEec-CCC-hhhHHHHHHHHHHcCCCeEEEeCCCChH--HHHHHHHHhCCceEEEEecCCc-c
Q 021527 156 VDNFMSTVRDIGIRG--LVVP-DVP-LEETESLQKEAMKNKIELVLFTTPTTPT--DRMKAIVEASEGFVYLVSSIGV-T 228 (311)
Q Consensus 156 ~~~fi~~~~~aGadG--viip-Dlp-~ee~~~~~~~~~~~gi~~I~lisp~t~~--eri~~i~~~a~gfiY~vs~~G~-T 228 (311)
. +.++.+.+.|+.- +.+. ..| .|+..++ ++..|+++|.+.. .+.. ....++++....++.++...|. -
T Consensus 663 ~-~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~---i~~lG~~vi~~~~-~~~~a~~~~~~~~~~g~d~~ii~~~~G~ea 737 (2051)
T 2uv8_G 663 I-PLIKELRSKGYPIQFLTIGAGVPSLEVASEY---IETLGLKYLGLKP-GSIDAISQVINIAKAHPNFPIALQWTGGRG 737 (2051)
T ss_dssp H-HHHHHHHHTTCSEEEEEEESSCCCHHHHHHH---HHHSCCSCEEECC-CSHHHHHHHHHHHHHSTTSCEEEEECCSSC
T ss_pred H-HHHHHHHHcCCCcceEEecCCCCchhhHHHH---HHHcCCEEEEecC-chHHHHHHHHHHHHhCCCceeEEEEEccCc
Confidence 2 6778888989754 7764 334 2444444 4555999887654 3332 2234455555566322222232 2
Q ss_pred CCCCC---CCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHH-----------HcCCcEEEEhhHhhchhh
Q 021527 229 GARAS---ISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVA-----------GWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 229 G~~~~---~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~-----------~~GADGvIVGSaiv~~~~ 287 (311)
|.+.+ +...+..++.++++..++||++++||.+.+.+...+ .+|||||.+||.|+-.-+
T Consensus 738 GGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~E 810 (2051)
T 2uv8_G 738 GGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKE 810 (2051)
T ss_dssp SEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTT
T ss_pred CCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcc
Confidence 22222 234456778999999999999999999999999999 899999999999998765
No 153
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.08 E-value=3.8e-05 Score=71.92 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=104.8
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhh-ccCCCcEEEEe------c
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVV-PQMSCPIALFT------Y 147 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir-~~~~iPiilm~------Y 147 (311)
.++.+.+.+..+.+.|+|.|-+.--| .+.+. ...+ ...++|+++-. +
T Consensus 46 ~l~~~k~lv~~~~~~~~~avl~~~g~---------~~~a~-----------------~~~~~~~~~~glil~l~~~~~l~ 99 (304)
T 1to3_A 46 VLTDFKVNAAKILSPYASAVLLDQQF---------CYRQA-----------------VEQNAVAKSCAMIVAADDFIPGN 99 (304)
T ss_dssp HHHHHHHHHHHHHGGGCSEEEECTTT---------THHHH-----------------HHTTCSCTTSEEEEECEEEEEET
T ss_pred hhhhHHHHHHHHHhcCCCEEEeCHHH---------HHHHh-----------------hcccccCCCCcEEEEECCCCCCC
Confidence 56788999999999999999985111 11110 0011 22456766541 1
Q ss_pred Ccc----hhccCHHHHHHHHHHcCCcEEEe-----cCCCh----hhHHHHHHHHHHcCCCeEEEeCC--------CCh--
Q 021527 148 YNP----ILKRGVDNFMSTVRDIGIRGLVV-----PDVPL----EETESLQKEAMKNKIELVLFTTP--------TTP-- 204 (311)
Q Consensus 148 ~n~----i~~~g~~~fi~~~~~aGadGvii-----pDlp~----ee~~~~~~~~~~~gi~~I~lisp--------~t~-- 204 (311)
.++ +..+ +-.++.+.+.|+|+|-+ +|.+- ++..++.++|+++|+..+.-+-| ..+
T Consensus 100 ~~~~~~~l~~~--~~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~ 177 (304)
T 1to3_A 100 GIPVDNVVLDK--KINAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQ 177 (304)
T ss_dssp TEEEEEEEECS--SCCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHH
T ss_pred CCccchhhccC--chhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhH
Confidence 011 1100 13577889999998853 34432 34677899999999987654421 122
Q ss_pred --HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCc-EEEeeCCCCH----HHHHHHHHcCCcEEE
Q 021527 205 --TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKP-VAVGFGISKP----EHVQQVAGWGADGVI 277 (311)
Q Consensus 205 --~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~P-v~vGfGIst~----e~v~~v~~~GADGvI 277 (311)
.++++... ..|..|+-...++.+. +....+.+.++.....+.+| |++-+|++ + +++..+.+.|++|++
T Consensus 178 ~v~~aa~~a~--~lGaD~iKv~~~~~~~--g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~-~~~~~~~~~~a~~aGa~Gv~ 252 (304)
T 1to3_A 178 AIIDAAKELG--DSGADLYKVEMPLYGK--GARSDLLTASQRLNGHINMPWVILSSGVD-EKLFPRAVRVAMEAGASGFL 252 (304)
T ss_dssp HHHHHHHHHT--TSSCSEEEECCGGGGC--SCHHHHHHHHHHHHHTCCSCEEECCTTSC-TTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHH--HcCCCEEEeCCCcCCC--CCHHHHHHHHHhccccCCCCeEEEecCCC-HHHHHHHHHHHHHcCCeEEE
Confidence 12232222 2455565222211111 11222333344333347899 99999994 5 469999999999999
Q ss_pred EhhHhhch
Q 021527 278 VGSAMVKL 285 (311)
Q Consensus 278 VGSaiv~~ 285 (311)
||+++...
T Consensus 253 vGRaI~q~ 260 (304)
T 1to3_A 253 AGRAVWSS 260 (304)
T ss_dssp ESHHHHGG
T ss_pred EehHHhCc
Confidence 99999975
No 154
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=98.08 E-value=8.7e-05 Score=70.34 Aligned_cols=167 Identities=16% Similarity=0.213 Sum_probs=106.2
Q ss_pred ChhhHHHHHH-HHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc------cC-CCcEEEEe
Q 021527 75 DLSTTAEALK-LLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP------QM-SCPIALFT 146 (311)
Q Consensus 75 ~~~~~~e~~~-~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~------~~-~iPiilm~ 146 (311)
+.++-+++++ .|++.|+|.||+|.|-+.| ++ ++.++++++ .. ++++..++
T Consensus 39 ~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~---~~-------------------~~~v~~~~~~~~~~~~~~~~~i~~l~ 96 (337)
T 3ble_A 39 STSEKLNIAKFLLQKLNVDRVEIASARVSK---GE-------------------LETVQKIMEWAATEQLTERIEILGFV 96 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEETTSCT---TH-------------------HHHHHHHHHHHHHTTCGGGEEEEEES
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCCCh---hH-------------------HHHHHHHHhhhhhhccCCCCeEEEEc
Confidence 4578899999 9999999999999998755 21 112222222 21 23444432
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCC------------h----hhHHHHHHHHHHcCCCeEEEeCC-----CChH
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVP------------L----EETESLQKEAMKNKIELVLFTTP-----TTPT 205 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp------------~----ee~~~~~~~~~~~gi~~I~lisp-----~t~~ 205 (311)
- +. ++++.+.++|+|.+-+.+-. . +...+..+.++++|+++.+.+.. .++.
T Consensus 97 ~-------~~-~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~ 168 (337)
T 3ble_A 97 D-------GN-KTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSP 168 (337)
T ss_dssp S-------TT-HHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCH
T ss_pred c-------ch-hhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCH
Confidence 1 12 37889999999988775311 1 34556778889999876655432 1123
Q ss_pred HHHHHHHH----hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 206 DRMKAIVE----ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 206 eri~~i~~----~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
+.+.++++ ..-..+++....|. ..|..+.++++.+++.+ ++|+-+ .+|... .+.-..+++|||.|
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~-----~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~-AN~laAv~aGa~~v 242 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGV-----LSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSV-ANSLQAIRAGVKGL 242 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCC-----CCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHH-HHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCC-----cCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHH-HHHHHHHHhCCCEE
Confidence 43333333 22334666654443 34777899999999987 788766 366654 45666778999977
Q ss_pred E
Q 021527 277 I 277 (311)
Q Consensus 277 I 277 (311)
=
T Consensus 243 d 243 (337)
T 3ble_A 243 H 243 (337)
T ss_dssp E
T ss_pred E
Confidence 3
No 155
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.08 E-value=5.5e-05 Score=72.83 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-------hh-hHHHHHHHHHHcCCC
Q 021527 123 NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-------LE-ETESLQKEAMKNKIE 194 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-------~e-e~~~~~~~~~~~gi~ 194 (311)
+.+...+.++++++. .+|+++-.-. ....++.+.+.++|+|.+.+..-+ .+ ....+....+..++.
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~-----~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~p 213 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP-----QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVP 213 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT-----TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC-----ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCC
Confidence 445556677777764 6776653211 123567777788999998764211 00 112234444556776
Q ss_pred eEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCC--CCCchHHHHHHHHhhc-------CC---CcEEEeeCCCCH
Q 021527 195 LVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARA--SISGHVQTLLREIKES-------ST---KPVAVGFGISKP 262 (311)
Q Consensus 195 ~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~--~~~~~~~~~l~~vk~~-------~~---~Pv~vGfGIst~ 262 (311)
++. -.-.++ +..+...+ .|..+++-..|.++.+. .......+.+.++++. ++ +||++.+||+++
T Consensus 214 vi~-ggi~t~-e~a~~~~~--~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~ 289 (393)
T 2qr6_A 214 VIA-GGVNDY-TTALHMMR--TGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENS 289 (393)
T ss_dssp EEE-ECCCSH-HHHHHHHT--TTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSH
T ss_pred EEE-CCcCCH-HHHHHHHH--cCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCH
Confidence 554 233344 33444434 34444322333333221 1112234556555544 33 999999999999
Q ss_pred HHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 263 EHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 263 e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
+|+.+++..|||+|.+|++|....+
T Consensus 290 ~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 290 GDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred HHHHHHHHcCCCEEEECHHHHcCCC
Confidence 9999999999999999999877654
No 156
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.07 E-value=0.00021 Score=63.25 Aligned_cols=188 Identities=15% Similarity=0.194 Sum_probs=109.5
Q ss_pred HHHHHHHHHHCCCCEEEEcC-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHH
Q 021527 79 TAEALKLLDSCGSDIIELGV-PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVD 157 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~ 157 (311)
..+.++.+.++|+|++=+-+ |-| |- -++.++.-++.+.+.+. -.++.++. |+ ..+
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~S-pR----------------~V~~~~a~~i~~~~~~~-~~~VgVfv--n~----~~~ 66 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKS-KR----------------YISPEDARRISVELPPF-VFRVGVFV--NE----EPE 66 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTC-TT----------------BCCHHHHHHHHHHSCSS-SEEEEEES--SC----CHH
T ss_pred cHHHHHHHHHcCCCEEEEEecCCC-CC----------------cCCHHHHHHHHHhCCCC-CCEEEEEe--CC----CHH
Confidence 36788899999999987764 322 21 13333333344444332 23456643 42 245
Q ss_pred HHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecC---CccCCCCC
Q 021527 158 NFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSI---GVTGARAS 233 (311)
Q Consensus 158 ~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~---G~TG~~~~ 233 (311)
...+.+.+.+.|.+=++ |-+++.... +++ ++..+.-+...... .+..+....-.++.+-+.. |.||..
T Consensus 67 ~i~~~~~~~~ld~vQLHG~e~~~~~~~----l~~-~~~vika~~v~~~~-~l~~~~~~~~d~~LlD~~~~~~GGtG~~-- 138 (205)
T 1nsj_A 67 KILDVASYVQLNAVQLHGEEPIELCRK----IAE-RILVIKAVGVSNER-DMERALNYREFPILLDTKTPEYGGSGKT-- 138 (205)
T ss_dssp HHHHHHHHHTCSEEEECSCCCHHHHHH----HHT-TSEEEEEEEESSHH-HHHHHGGGTTSCEEEEESCSSSSSCCSC--
T ss_pred HHHHHHHhhCCCEEEECCCCCHHHHHH----Hhc-CCCEEEEEEcCCHH-HHHHHHHcCCCEEEECCCCCCCCCCCCc--
Confidence 55667788999999987 344443333 321 45555544444332 2333322222233333432 667753
Q ss_pred CCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 234 ISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAG-WGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 234 ~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
++.+. ++.++ ..+.|++..+|++ |||+.+..+ .+++||=|.|.+...-+ ....+++++|++.++.
T Consensus 139 fdw~~---l~~~~-~~~~p~~LAGGL~-peNV~~ai~~~~p~gVDvsSGvE~~pG-----~KD~~ki~~fi~~~r~ 204 (205)
T 1nsj_A 139 FDWSL---ILPYR-DRFRYLVLSGGLN-PENVRSAIDVVRPFAVDVSSGVEAFPG-----KKDHDSIKMFIKNAKG 204 (205)
T ss_dssp CCGGG---TGGGG-GGSSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGEEETT-----EECHHHHHHHHHHHHT
T ss_pred cCHHH---HHhhh-cCCCcEEEECCCC-HHHHHHHHHhcCCCEEEECCceecCCC-----CcCHHHHHHHHHHHhh
Confidence 44432 33321 2368999999996 899977654 68999999999985211 1346789999998875
No 157
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.06 E-value=0.00013 Score=67.73 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=106.7
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.++.+++++.|.+.|+|.||+|.+- .|-.. |... +..+.++.+++..++++..+. .|
T Consensus 25 ~~e~k~~i~~~L~~~Gv~~IE~g~~~-~~~~~-p~~~--------------d~~~~~~~~~~~~~~~~~~l~-~~----- 82 (298)
T 2cw6_A 25 STPVKIKLIDMLSEAGLSVIETTSFV-SPKWV-PQMG--------------DHTEVLKGIQKFPGINYPVLT-PN----- 82 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEECCEECC-CTTTC-GGGT--------------THHHHHHHSCCCTTCBCCEEC-CS-----
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCc-Ccccc-cccC--------------CHHHHHHHHhhCCCCEEEEEc-CC-----
Confidence 46788899999999999999999733 33211 1110 011244445443355555543 33
Q ss_pred CHHHHHHHHHHcCCcEEEecCCC------------h----hhHHHHHHHHHHcCCCeEEEeC-----C---CChHHHHHH
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVP------------L----EETESLQKEAMKNKIELVLFTT-----P---TTPTDRMKA 210 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp------------~----ee~~~~~~~~~~~gi~~I~lis-----p---~t~~eri~~ 210 (311)
.+.++.+.++|++.+.+.+-. . +...+..+.++++|+++...++ | .++.+.+.+
T Consensus 83 --~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~ 160 (298)
T 2cw6_A 83 --LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAE 160 (298)
T ss_dssp --HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHH
T ss_pred --HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 456888999999988885322 1 2345567888999987643322 1 123444433
Q ss_pred HHH----hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE----eeCCCCHHHHHHHHHcCCcEEE
Q 021527 211 IVE----ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV----GFGISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 211 i~~----~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v----GfGIst~e~v~~v~~~GADGvI 277 (311)
+++ ..-..+++....|. ..|..+.++++.+++.. ++|+-+ .+|... .+....+++||+-|=
T Consensus 161 ~~~~~~~~Ga~~i~l~DT~G~-----~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~-An~laA~~aGa~~vd 230 (298)
T 2cw6_A 161 VTKKFYSMGCYEISLGDTIGV-----GTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQAL-ANTLMALQMGVSVVD 230 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSC-----CCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHH-HHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEEecCCCCC-----cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH-HHHHHHHHhCCCEEE
Confidence 333 33345666654443 34677899999999987 467655 345543 456667789999774
No 158
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=98.05 E-value=0.00016 Score=70.58 Aligned_cols=167 Identities=15% Similarity=0.196 Sum_probs=103.7
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILK 153 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~ 153 (311)
+.++-+++++.|++.|+|.||+|+|-+.| +-++.++.+.+. .+..+....-
T Consensus 59 s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp----------------------~d~~~~~~i~~~~~~~~v~~~~r------ 110 (423)
T 3ivs_A 59 DTEKKIQIAKALDNFGVDYIELTSPVASE----------------------QSRQDCEAICKLGLKCKILTHIR------ 110 (423)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCTTSCH----------------------HHHHHHHHHHTSCCSSEEEEEEE------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecccCH----------------------HHHHHHHHHHhcCCCCEEEEeec------
Confidence 35788999999999999999999876544 112344455433 2333322211
Q ss_pred cCHHHHHHHHHHcCCcEEEec----CC--------Ch----hhHHHHHHHHHHcCCCeEEEeCC--CChHHHHHHHH---
Q 021527 154 RGVDNFMSTVRDIGIRGLVVP----DV--------PL----EETESLQKEAMKNKIELVLFTTP--TTPTDRMKAIV--- 212 (311)
Q Consensus 154 ~g~~~fi~~~~~aGadGviip----Dl--------p~----ee~~~~~~~~~~~gi~~I~lisp--~t~~eri~~i~--- 212 (311)
...+-++.+.++|++.|.+. |. .. +...+..+.++++|+++.+.+.. .++.+.+.+++
T Consensus 111 -~~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~ 189 (423)
T 3ivs_A 111 -CHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAV 189 (423)
T ss_dssp -SCHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHH
T ss_pred -cChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHH
Confidence 22455788999999988773 21 12 33456778889999986654321 12334433333
Q ss_pred -HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 213 -EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 213 -~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
+.....+++....|. ..|..+.++++.+++..++|+-+ .+|... .+....+++|||.|
T Consensus 190 ~~~Ga~~i~l~DTvG~-----~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAv-AN~laAv~aGa~~v 252 (423)
T 3ivs_A 190 DKIGVNRVGIADTVGC-----ATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAI-ANAYCALEAGATHI 252 (423)
T ss_dssp HHHCCSEEEEEETTSC-----CCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHH-HHHHHHHHTTCCEE
T ss_pred HHhCCCccccCCccCc-----CCHHHHHHHHHHHHhhcCCeEEEEECCCCchHH-HHHHHHHHhCCCEE
Confidence 333345666665543 34667889999999887777655 345543 45666677999966
No 159
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=98.04 E-value=0.00012 Score=68.15 Aligned_cols=171 Identities=15% Similarity=0.201 Sum_probs=104.5
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILK 153 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~ 153 (311)
+.++-+++++.|.++|+|.||+|+|.+.| ++ ++.++.+++. .++++..++-.+ .
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~---~d-------------------~e~v~~i~~~~~~~~i~~l~~~~---~ 79 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGFPISSP---GD-------------------FECVKAIAKAIKHCSVTGLARCV---E 79 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECGGGCH---HH-------------------HHHHHHHHHHCCSSEEEEEEESS---H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCc---cH-------------------HHHHHHHHHhcCCCEEEEEecCC---H
Confidence 35788999999999999999999888654 10 1234444432 345565554322 2
Q ss_pred cCHHHHHHHHHHcCCcEEEecC------------CChhh----HHHHHHHHHHcCCCeEEEeC--CCChHHHHHHHHHh-
Q 021527 154 RGVDNFMSTVRDIGIRGLVVPD------------VPLEE----TESLQKEAMKNKIELVLFTT--PTTPTDRMKAIVEA- 214 (311)
Q Consensus 154 ~g~~~fi~~~~~aGadGviipD------------lp~ee----~~~~~~~~~~~gi~~I~lis--p~t~~eri~~i~~~- 214 (311)
.++++.++.++.+|++.+.+.+ ...+| ..+..+.++++|+.+.+.+. +.++.+.+.++++.
T Consensus 80 ~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~ 159 (293)
T 3ewb_X 80 GDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTA 159 (293)
T ss_dssp HHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHH
Confidence 2445555555668998877642 12222 45667778999987554332 22445554444443
Q ss_pred ---CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC----CcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 215 ---SEGFVYLVSSIGVTGARASISGHVQTLLREIKESST----KPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 215 ---a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~----~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
.-..+++.. ++|. ..|..+.++++.+++.++ +|+-+ .+|... .+....+++||+.|
T Consensus 160 ~~~G~~~i~l~D---T~G~--~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~-AN~laA~~aGa~~v 226 (293)
T 3ewb_X 160 IDAGATVINIPD---TVGY--TNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMAT-ANALAAIENGARRV 226 (293)
T ss_dssp HHTTCCEEEEEC---SSSC--CCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHH-HHHHHHHHTTCCEE
T ss_pred HHcCCCEEEecC---CCCC--CCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHH-HHHHHHHHhCCCEE
Confidence 233455554 4443 356778899999998763 45544 345543 45667778999965
No 160
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=98.04 E-value=0.00051 Score=63.29 Aligned_cols=176 Identities=15% Similarity=0.173 Sum_probs=108.0
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+...+.++.+.+.|||+|-+|...+.. | ..+.+...++.+++.+++|+.+.+|-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~--e----------------E~~rv~~vi~~l~~~~~~pisIDT~~------ 87 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTAD--D----------------PVRVMEWLVKTIQEVVDLPCCLDSTN------ 87 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSS--C----------------HHHHHHHHHHHHHHHCCCCEEEECSC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCch--h----------------HHHHHHHHHHHHHHhCCCeEEEeCCC------
Confidence 45788999999999999999999766322 2 12345668888888889999999872
Q ss_pred CHHHHHHHHHHc--CCcEEEecCCChhh--HHHHHHHHHHcCCCeEEEeC-----CCChHHHHHHHHH-----hCCce--
Q 021527 155 GVDNFMSTVRDI--GIRGLVVPDVPLEE--TESLQKEAMKNKIELVLFTT-----PTTPTDRMKAIVE-----ASEGF-- 218 (311)
Q Consensus 155 g~~~fi~~~~~a--GadGviipDlp~ee--~~~~~~~~~~~gi~~I~lis-----p~t~~eri~~i~~-----~a~gf-- 218 (311)
.+-++.+.++ |++-+ .|+.-++ ..++.+.++++|...|.+-. |.+.++++....+ ...|+
T Consensus 88 --~~v~~aal~a~~Ga~iI--Ndvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~ 163 (271)
T 2yci_X 88 --PDAIEAGLKVHRGHAMI--NSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPM 163 (271)
T ss_dssp --HHHHHHHHHHCCSCCEE--EEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCG
T ss_pred --HHHHHHHHHhCCCCCEE--EECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCc
Confidence 3456667777 88754 4433332 35678888999997776643 4554444322211 12343
Q ss_pred --EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEe-----eCCCCHHHH-----HHHHHcCCcEEEE
Q 021527 219 --VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVG-----FGISKPEHV-----QQVAGWGADGVIV 278 (311)
Q Consensus 219 --iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vG-----fGIst~e~v-----~~v~~~GADGvIV 278 (311)
+++-...|.-|.....+..+.+.++++++.. +.|+++| ||....+-+ ..+...|+|.+||
T Consensus 164 ~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksfg~~~r~~l~~t~~~~a~~~g~~~~iv 237 (271)
T 2yci_X 164 TELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQKCPDRPLINRTYLVMAMTAGLDAAIM 237 (271)
T ss_dssp GGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCccccCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 6766655532432221223344455555543 4899996 454322222 2334678888876
No 161
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.03 E-value=6.5e-05 Score=75.15 Aligned_cols=140 Identities=18% Similarity=0.204 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~ 156 (311)
...+-+++|.++|+|+|-++ .+.| -+ +..++.++.||+.. ++||+.. |.. .
T Consensus 281 d~~eR~~aLv~AGvD~iviD------~ahG--------------hs-~~v~~~i~~ik~~~p~~~viaG---NVa----T 332 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLD------SSQG--------------NS-VYQIEFIKWIKQTYPKIDVIAG---NVV----T 332 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEEC------CSCC--------------CS-HHHHHHHHHHHHHCTTSEEEEE---EEC----S
T ss_pred cHHHHHHHHHhcCCcEEEEe------cccc--------------cc-HHHHHHHHHHHhhCCcceEEec---ccc----C
Confidence 57889999999999999997 3334 22 34578899998764 7888775 322 1
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+-.+.+.++|+|+|.+.=-| .- ..+| |+ +||..-..-.
T Consensus 333 ~e~a~~Li~aGAD~vkVGiGp----------------GS----iCtT---r~------------------v~GvG~PQ~t 371 (556)
T 4af0_A 333 REQAAQLIAAGADGLRIGMGS----------------GS----ICIT---QE------------------VMAVGRPQGT 371 (556)
T ss_dssp HHHHHHHHHHTCSEEEECSSC----------------ST----TBCC---TT------------------TCCSCCCHHH
T ss_pred HHHHHHHHHcCCCEEeecCCC----------------Cc----cccc---cc------------------ccCCCCcHHH
Confidence 344566788999998664111 10 1122 11 2222111111
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.+.+ +.+..+..++||+..+||++.-|+.+.+.+|||.|-+||.|...-+
T Consensus 372 Ai~~-~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~E 421 (556)
T 4af0_A 372 AVYA-VAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTE 421 (556)
T ss_dssp HHHH-HHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred HHHH-HHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccccC
Confidence 1222 4445555689999999999999999999999999999999987664
No 162
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=98.02 E-value=0.00018 Score=69.77 Aligned_cols=161 Identities=16% Similarity=0.123 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-Cc
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iP 141 (311)
+.+.+.++.+.++|.|+|||-. |.++---| |. +.+- .+-.+++++.||+.+. .|
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGs-lenR----------~rf~~Eiv~aVr~avg~~~ 239 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-LANR----------CKFITQVVQAVVSAIGADR 239 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-HHHH----------HHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcC-hhhh----------hHHHHHHHHHHHHHhCCCc
Confidence 5788999999999999999954 66443333 22 2221 2335678888887653 38
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcC------CCeEEEeCCCChHHHHHHHHHhC
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNK------IELVLFTTPTTPTDRMKAIVEAS 215 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~g------i~~I~lisp~t~~eri~~i~~~a 215 (311)
|.+-.-.+..+. |.+ ...+.++..++.+.+.+.| ++.+-+..++... . ...
T Consensus 240 V~vRls~~~~~~-------------g~~----~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~-----~-~~~ 296 (402)
T 2hsa_B 240 VGVRVSPAIDHL-------------DAM----DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVA-----Y-GQT 296 (402)
T ss_dssp EEEEECSSCCST-------------TCC----CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCT-----T-TTS
T ss_pred EEEEeccccccC-------------CCC----CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCcccc-----c-cCC
Confidence 777421110000 111 1123456666777777777 7766665443210 0 000
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
.. +..+ . +....++++++|+.+++||++.+|| +++++.++++.| ||+|-+|.+++.
T Consensus 297 ~~-----~~~~-~------~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 297 EA-----GRLG-S------EEEEARLMRTLRNAYQGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp SS-----TTTT-H------HHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred cc-----cccc-C------CcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 00 0000 0 0012467889999999999999999 899999999988 999999998875
No 163
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.01 E-value=2.1e-05 Score=70.76 Aligned_cols=46 Identities=28% Similarity=0.369 Sum_probs=43.0
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.++++++++.+++||++++||++++++.++++.|||+|++|+++.+
T Consensus 68 ~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 68 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 4689999999999999999999999999999999999999999774
No 164
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.00 E-value=1.7e-05 Score=75.39 Aligned_cols=180 Identities=17% Similarity=0.126 Sum_probs=93.1
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHH---CCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDS---CGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~---~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
..++.=+ +--+.+...+..+.+.+ .++|+|||.+ |-|-..| .+. .+...+.+.++++.+++..+
T Consensus 127 ~pvivsi--~g~~~~~~~~~~~~~~~~~~~~ad~ielNi--ScPn~~g-------~~~--l~~~~~~~~~i~~~v~~~~~ 193 (354)
T 3tjx_A 127 KPLFLSM--SGLSMRENVEMCKRLAAVATEKGVILELNL--SCPNVPG-------KPQ--VAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp CCEEEEE--CCSSHHHHHHHHHHHHHHHHHHCCEEEEEC--C------------------CTTSHHHHHHHHHHHHHHCC
T ss_pred ceEEEEE--ecCChHHHHHHHHHHHHhhhcCCCEEEeee--CCCCCcc-------hhh--hccCHHHHHHHHHHHHHHhh
Confidence 3444433 33344666666665554 4899999985 4453332 111 23455666778888888888
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCC-cEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGI-RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGa-dGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
.|+.+-.--+. .....+...+.+.+.+. +++...+- +..-..+...+. +. ......++
T Consensus 194 ~pv~vK~~p~~-~~~~~~~~~~~~~~~~~~~~i~~i~t----------------~~~~~~id~~~~--~~--~~~~~~~~ 252 (354)
T 3tjx_A 194 HSFGVKMPPYF-DFAAFDAAAEILNEFPKVQFITCINS----------------IGNGLVIDAETE--SV--VIKPKQGF 252 (354)
T ss_dssp SCEEEEECCCC-SHHHHHHHHHHHHTCTTEEEEEECCC----------------EEEEECEETTTT--EE--SCSGGGGE
T ss_pred cccccccCCCC-CchhHHHHHHHHHhhcccchhheecc----------------cccccccccccc--cc--cccCcccc
Confidence 99877542210 00011223333334333 33222211 000000111110 00 00000010
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
-|.+|. .+.+-..+.+.++++.+ ++||+.-+||.|.+|+.+.+.+|||.|-|||+++.
T Consensus 253 ------GGlSG~--~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y 311 (354)
T 3tjx_A 253 ------GGLGGR--YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp ------EEEEGG--GGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred ------cccCch--hhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhh
Confidence 022332 22233456777877664 78999999999999999999999999999999864
No 165
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=97.98 E-value=0.0002 Score=68.78 Aligned_cols=167 Identities=14% Similarity=0.165 Sum_probs=103.7
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcchhc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNPILK 153 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~i~~ 153 (311)
+.++-+++++.|++.|+|.||+|+|.+.| + =++.++++++. .+..+..++-.|
T Consensus 32 ~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~---~-------------------d~e~v~~i~~~~~~~~i~~l~r~~---- 85 (370)
T 3rmj_A 32 TKEEKIRVARQLEKLGVDIIEAGFAAASP---G-------------------DFEAVNAIAKTITKSTVCSLSRAI---- 85 (370)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEGGGCH---H-------------------HHHHHHHHHTTCSSSEEEEEEESS----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCH---H-------------------HHHHHHHHHHhCCCCeEEEEecCC----
Confidence 34788999999999999999999988654 1 02355555544 344555554333
Q ss_pred cCHHHHHHHHHH----cCCcEEEecC------------CChhh----HHHHHHHHHHcCCCeEEEe--CCCChHHHHHHH
Q 021527 154 RGVDNFMSTVRD----IGIRGLVVPD------------VPLEE----TESLQKEAMKNKIELVLFT--TPTTPTDRMKAI 211 (311)
Q Consensus 154 ~g~~~fi~~~~~----aGadGviipD------------lp~ee----~~~~~~~~~~~gi~~I~li--sp~t~~eri~~i 211 (311)
.+.++.+.+ +|++.+.+.+ ...+| ..+..+.++++|.+..+.. ...++.+.+.++
T Consensus 86 ---~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~ 162 (370)
T 3rmj_A 86 ---ERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEI 162 (370)
T ss_dssp ---HHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHH
T ss_pred ---HHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHH
Confidence 344554444 8999877642 12233 3446777889998865543 123334544444
Q ss_pred HH----hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC----CcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 212 VE----ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST----KPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 212 ~~----~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~----~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
++ ..-..+++....|+ ..|..+.++++.+++.++ +|+-+ .+|... .+.-..+++||+.|
T Consensus 163 ~~~~~~~Ga~~i~l~DT~G~-----~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAv-AN~laAv~aGa~~v 233 (370)
T 3rmj_A 163 CGAVIEAGATTINIPDTVGY-----SIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAV-ANSLAALKGGARQV 233 (370)
T ss_dssp HHHHHHHTCCEEEEECSSSC-----CCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHH-HHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEecCccCC-----cCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHH-HHHHHHHHhCCCEE
Confidence 33 33345666654443 346778899999998764 56655 345543 45566677999977
No 166
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.97 E-value=0.00015 Score=71.65 Aligned_cols=183 Identities=15% Similarity=0.127 Sum_probs=114.0
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEec-Ccchh
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTY-YNPIL 152 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y-~n~i~ 152 (311)
..++.+++++.|++.|++.||+|.|-+ .. +..+.+ +-+- .+.++++++. .+.++..++- .|..-
T Consensus 28 ~~~dkl~Ia~~L~~~Gv~~IE~g~~at--------F~-~~~r~~--~~d~---~e~l~~i~~~~~~~~l~~l~R~~N~~G 93 (464)
T 2nx9_A 28 RIDDMLPIAQQLDQIGYWSLECWGGAT--------FD-SCIRFL--GEDP---WQRLRLLKQAMPNTPLQMLLRGQNLLG 93 (464)
T ss_dssp CGGGTGGGHHHHHTSCCSEEEEEETTH--------HH-HHHHTT--CCCH---HHHHHHHHHHCSSSCEEEEECGGGTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcCcc--------cc-chhhcc--CCCH---HHHHHHHHHhCCCCeEEEEeccccccC
Confidence 456778999999999999999996631 00 011111 1111 3445555543 4566666642 12110
Q ss_pred --ccC---HHHHHHHHHHcCCcEEEecCCC--hhhHHHHHHHHHHcCCCeEEEe----CCCChHHHHHH----HHHhCCc
Q 021527 153 --KRG---VDNFMSTVRDIGIRGLVVPDVP--LEETESLQKEAMKNKIELVLFT----TPTTPTDRMKA----IVEASEG 217 (311)
Q Consensus 153 --~~g---~~~fi~~~~~aGadGviipDlp--~ee~~~~~~~~~~~gi~~I~li----sp~t~~eri~~----i~~~a~g 217 (311)
.|. .+.|++.+.++|+|.+-+-|-. .+...+..+.++++|..+...+ ++..+.+...+ +.+..-.
T Consensus 94 ~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad 173 (464)
T 2nx9_A 94 YRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVD 173 (464)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCS
T ss_pred cccccchhhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCC
Confidence 011 3679999999999998886532 3557778888999998764333 23333444333 3333344
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE----eeCCCCHHHHHHHHHcCCcEEE
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV----GFGISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v----GfGIst~e~v~~v~~~GADGvI 277 (311)
.|++....|. ..|..+.++++.+|+.+++|+-+ .+|... .+....+++|||.|=
T Consensus 174 ~I~l~DT~G~-----~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAv-AN~laAv~AGa~~VD 231 (464)
T 2nx9_A 174 SIALKDMAGI-----LTPYAAEELVSTLKKQVDVELHLHCHSTAGLAD-MTLLKAIEAGVDRVD 231 (464)
T ss_dssp EEEEEETTSC-----CCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHH-HHHHHHHHTTCSEEE
T ss_pred EEEEcCCCCC-----cCHHHHHHHHHHHHHhcCCeEEEEECCCCChHH-HHHHHHHHhCCCEEE
Confidence 5677665553 34777899999999988888866 356653 456677789999663
No 167
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.96 E-value=0.0001 Score=72.00 Aligned_cols=158 Identities=16% Similarity=0.168 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHCCCCEEEEc--C---------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-----
Q 021527 78 TTAEALKLLDSCGSDIIELG--V---------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQM----- 138 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG--~---------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~----- 138 (311)
.+.+.++...++|.|+|||- . |.++---| |..+++-+ +-.+++++++|+.+
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~----------Rf~~evv~aVr~~v~~~~~ 240 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRA----------RLCLEVMRAVQEVIDKEAP 240 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHH----------HHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhh----------HHHHHHHHHHHHHHhhhcC
Confidence 57888889999999999993 2 54443333 22212211 23467777777654
Q ss_pred -CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHH-cCCCeEEEeCCCChHHHHHHHHHhCC
Q 021527 139 -SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK-NKIELVLFTTPTTPTDRMKAIVEASE 216 (311)
Q Consensus 139 -~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~-~gi~~I~lisp~t~~eri~~i~~~a~ 216 (311)
+.||.+-........ |..| +..++..++.+.+.+ .|++.|-+...+.. .
T Consensus 241 ~~f~v~vRis~~~~~~-------------~~~G-----~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~--~--------- 291 (419)
T 3l5a_A 241 DNFILGFRATPEETRG-------------SDLG-----YTIDEFNQLIDWVMDVSNIQYLAIASWGRH--I--------- 291 (419)
T ss_dssp TTCEEEEEECSCEEET-------------TEEE-----ECHHHHHHHHHHHHHHSCCCCEEECCTTCC--G---------
T ss_pred CCeeEEEecccccccC-------------CCCC-----CCHHHHHHHHHHHHhhcCCcEEEEeeCCcc--c---------
Confidence 567777432111100 0002 234667777777777 88887766544320 0
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+.|-.. ..|. ... .++++.+|+.+ ++||++.+||.+++++.++++. ||.|.+|.+++.
T Consensus 292 -~~~~~~---~~g~--~~~---~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 292 -YQNTSR---TPGD--HFG---RPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp -GGCBCC---CSST--TTT---SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred -cccccC---CCCc--ccc---HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 000000 1111 111 13567777765 5899999999999999999999 999999999864
No 168
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=97.95 E-value=0.00021 Score=67.22 Aligned_cols=105 Identities=17% Similarity=0.291 Sum_probs=76.2
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCC----hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLAD----GPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNP 150 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aD----Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~ 150 (311)
+.+..++.++.+.+.|||+|-+|...+-|-++ ....+.- ++.+...|+.+++..++||-+.+|-
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE----------~~Rv~pvI~~l~~~~~vpISIDT~~-- 114 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIE----------LDRLLPVIDAIKKRFPQLISVDTSR-- 114 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHH----------HHHHHHHHHHHHHHCCSEEEEECSC--
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHH----------HHHHHHHHHHHHhhCCCeEEEeCCC--
Confidence 45788999999999999999999988888655 2111211 1234567888888789999999873
Q ss_pred hhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 199 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li 199 (311)
.+-++.+.++|++ ||.|+.-++..++.+.++++|...|.+-
T Consensus 115 ------~~Va~aAl~aGa~--iINDVsg~~~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 115 ------PRVMREAVNTGAD--MINDQRALQLDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp ------HHHHHHHHHHTCC--EEEETTTTCSTTHHHHHHHHTCCEEEEC
T ss_pred ------HHHHHHHHHcCCC--EEEECCCCCchHHHHHHHHhCCeEEEEC
Confidence 3466778888988 5666654444467778889998877654
No 169
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=97.94 E-value=0.00037 Score=70.02 Aligned_cols=183 Identities=13% Similarity=0.112 Sum_probs=114.1
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEec-Ccch
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTY-YNPI 151 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y-~n~i 151 (311)
-+.++-+++++.|++.|++.||+|.|-+ .. +..+.+ +-+- ++.++++++. .++++..++- -|..
T Consensus 44 ~~tedKl~Ia~~L~~~Gv~~IE~G~pat--------F~-~~~rfl--~~d~---~e~lr~l~~~~~~~~l~~L~R~~N~~ 109 (539)
T 1rqb_A 44 MAMEDMVGACADIDAAGYWSVECWGGAT--------YD-SCIRFL--NEDP---WERLRTFRKLMPNSRLQMLLRGQNLL 109 (539)
T ss_dssp CCGGGTGGGHHHHHHTTCSEEEEEETTH--------HH-HHHHTS--CCCH---HHHHHHHHHHCTTSCEEEEECGGGTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcccc--------cc-cchhcc--CCCH---HHHHHHHHHhCCCCEEEEEecccccc
Confidence 3457778999999999999999997631 00 011111 1122 3445555543 4566766642 1211
Q ss_pred --hccC---HHHHHHHHHHcCCcEEEecCCC--hhhHHHHHHHHHHcCCCeEEEe----CCCChHHHHHHH----HHhCC
Q 021527 152 --LKRG---VDNFMSTVRDIGIRGLVVPDVP--LEETESLQKEAMKNKIELVLFT----TPTTPTDRMKAI----VEASE 216 (311)
Q Consensus 152 --~~~g---~~~fi~~~~~aGadGviipDlp--~ee~~~~~~~~~~~gi~~I~li----sp~t~~eri~~i----~~~a~ 216 (311)
-.|. .++|++.+.++|+|.+-+-|-. .+...+..+.++++|...-..+ ++.++.+...++ .+..-
T Consensus 110 G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 110 GYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTC
T ss_pred CcccCcccccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCC
Confidence 0111 4789999999999999886532 3567778888999998753233 223334443333 33333
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEE----eeCCCCHHHHHHHHHcCCcEE
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAV----GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~v----GfGIst~e~v~~v~~~GADGv 276 (311)
..|++....|. ..|..+.++++.+|+.+ ++||-+ .+|... .+....+++|||.|
T Consensus 190 d~I~L~DT~G~-----~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAv-AN~laAveAGa~~V 249 (539)
T 1rqb_A 190 DSIALKDMAAL-----LKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTE-VSLMKAIEAGVDVV 249 (539)
T ss_dssp SEEEEEETTCC-----CCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHH-HHHHHHHHTTCSEE
T ss_pred CEEEeCCCCCC-----cCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHH-HHHHHHHHhCCCEE
Confidence 45677665553 34677899999999987 678766 356653 45667778999866
No 170
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.91 E-value=0.00035 Score=61.72 Aligned_cols=187 Identities=13% Similarity=0.138 Sum_probs=109.6
Q ss_pred HHHHHHHHHHCCCCEEEEcC-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHH
Q 021527 79 TAEALKLLDSCGSDIIELGV-PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVD 157 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~ 157 (311)
..+.++.+.++|+|++=+-+ |-| |- -++.++.-++.+.+.+. -.++.++. |+ ..+
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~S-pR----------------~V~~~~a~~i~~~~~~~-~~~VgVfv--n~----~~~ 65 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGS-RR----------------RIAPEAARAIGEALGPF-VVRVGVFR--DQ----PPE 65 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTC-TT----------------BCCHHHHHHHHHHSCSS-SEEEEEES--SC----CHH
T ss_pred cHHHHHHHHHcCCCEEEEEecCCC-CC----------------cCCHHHHHHHHHhCCCC-CCEEEEEe--CC----CHH
Confidence 36788899999999987764 322 21 13333333444444432 23456643 42 245
Q ss_pred HHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 158 NFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 158 ~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
...+.+.+.+.|.+=++ |-+++.... ++. ++..+.-+......+ + ......-.++.+-+..|.||.. ++.
T Consensus 66 ~i~~~~~~~~ld~vQLHG~e~~~~~~~----l~~-~~~vika~~v~~~~~-l-~~~~~~~d~~LlD~~~gGtG~~--fdW 136 (203)
T 1v5x_A 66 EVLRLMEEARLQVAQLHGEEPPEWAEA----VGR-FYPVIKAFPLEGPAR-P-EWADYPAQALLLDGKRPGSGEA--YPR 136 (203)
T ss_dssp HHHHHHHHTTCSEEEECSCCCHHHHHH----HTT-TSCEEEEEECSSSCC-G-GGGGSSCSEEEEECSSTTSCCC--CCG
T ss_pred HHHHHHHhhCCCEEEECCCCCHHHHHH----hcc-CCCEEEEEEcCChHh-h-hhhhcCCCEEEEcCCCCCCCCc--cCH
Confidence 56667788999999987 344443333 322 566665544333211 1 1212211233333444667753 444
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
+. ++.+. ..+.|++..+|++ |||+.+....+++||=|.|.+...-+ ....+++++|++.++.
T Consensus 137 ~~---l~~~~-~~~~p~~LAGGL~-peNV~~ai~~~p~gVDvsSGvE~~pG-----~KD~~ki~~fi~~~r~ 198 (203)
T 1v5x_A 137 AW---AKPLL-ATGRRVILAGGIA-PENLEEVLALRPYALDLASGVEEAPG-----VKSAEKLRALFARLAS 198 (203)
T ss_dssp GG---GHHHH-HTTSCEEECSSCC-STTHHHHHHHCCSEEEESGGGEEETT-----EECHHHHHHHHHHHHH
T ss_pred HH---HHhhh-ccCCcEEEECCCC-HHHHHHHHhcCCCEEEeCCceecCCC-----CcCHHHHHHHHHHHHH
Confidence 33 33311 1357999999996 89997766768999999999985221 1246788999988875
No 171
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.88 E-value=0.00028 Score=67.99 Aligned_cols=149 Identities=17% Similarity=0.128 Sum_probs=94.2
Q ss_pred hHHHHHHHHH-HCCCCEEEEcC-----------CCCCCC-CC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-C
Q 021527 78 TTAEALKLLD-SCGSDIIELGV-----------PYSDPL-AD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-C 140 (311)
Q Consensus 78 ~~~e~~~~L~-~~GaD~IElG~-----------PfsDP~-aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-i 140 (311)
.+.+.++.+. ++|.|.|||-. |.++-- -| |..+++- .+-.+++++.+|+.+. -
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR----------~r~~~eiv~aVr~avg~~ 244 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTR----------CQLIYDVTKSVCDAVGSD 244 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHH----------HHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhh----------HHHHHHHHHHHHHhcCCC
Confidence 4567777888 99999999932 553322 33 3122221 2334677888887643 3
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
||.+-.-.+..+. +.+ ...+.++..++.+.+.+.|++.+-+...+.. ..
T Consensus 245 ~v~vRis~~~~~~-------------~~~----~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----------~~---- 293 (379)
T 3aty_A 245 RVGLRISPLNGVH-------------GMI----DSNPEALTKHLCKKIEPLSLAYLHYLRGDMV----------NQ---- 293 (379)
T ss_dssp GEEEEECTTCCGG-------------GCC----CSCHHHHHHHHHHHHGGGCCSEEEEECSCTT----------SC----
T ss_pred eEEEEECcccccc-------------cCC----CCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC----------CC----
Confidence 7666321110000 000 0224456667777777888887766543311 00
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
..+. + ++++|+.+++||++++|| +++++.++++.| ||.|-+|.+++.
T Consensus 294 ------------~~~~---~-~~~ir~~~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 294 ------------QIGD---V-VAWVRGSYSGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp ------------CCCC---H-HHHHHTTCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ------------CccH---H-HHHHHHHCCCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 1122 5 888999999999999999 899999999998 999999999886
No 172
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.88 E-value=7.1e-05 Score=72.01 Aligned_cols=153 Identities=13% Similarity=0.062 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcC-----------CCCCCCCC---hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-Cc
Q 021527 77 STTAEALKLLDSCGSDIIELGV-----------PYSDPLAD---GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~-----------PfsDP~aD---Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iP 141 (311)
+.+.+.++.+.++|.|+|||-. |.++---| |. +.+- .+-.+++++.+|+.+. -|
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR----------~r~~~eiv~aVr~avg~~~ 235 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGS-LENR----------CRFALEIVEAVANEIGSDR 235 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHH----------HHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCcc-HHHh----------HHHHHHHHHHHHHHhcCCc
Confidence 4788899999999999999942 55433333 32 2211 2335778888887753 28
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
|.+-.-.+..+. |.+ .+.+.++..++.+.+.+.|++.+-+..++....
T Consensus 236 V~vrls~~~~~~-------------g~~----~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~--------------- 283 (376)
T 1icp_A 236 VGIRISPFAHYN-------------EAG----DTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA--------------- 283 (376)
T ss_dssp EEEEECTTCCTT-------------TCC----CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC----------------
T ss_pred eEEEeccccccC-------------CCC----CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC---------------
Confidence 877532110000 111 123345566677777777877776654432100
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
+ .+. . .. ++++++|+.+++||++++|| +++++.++++.| ||+|-+|.+++.
T Consensus 284 ----~-~~~--~-~~---~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 284 ----W-EKI--E-CT---ESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp -------------CC---CCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ----C-Ccc--c-cH---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 0 000 0 01 24677788889999999999 799999999988 999999999875
No 173
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.86 E-value=0.0028 Score=59.15 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=122.2
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNA 126 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~ 126 (311)
.+.|.++++++++. ..+++=|+ -.++.++++|+|.|=+| |--+..+ .+. ..+++++
T Consensus 11 ~~~lr~l~~~~~~i--~~~~a~D~------~sA~l~e~aGf~ai~vs---------~~s~a~~---~~G~pD~~~vt~~e 70 (298)
T 3eoo_A 11 GAKFRAAVAAEQPL--QVVGAITA------YAAKMAEAVGFKAVYLS---------GGGVAAN---SLGIPDLGISTMDD 70 (298)
T ss_dssp HHHHHHHHHHSSSE--EEEECSSH------HHHHHHHHHTCSCEEEC---------HHHHHHH---TTCCCSSSCCCHHH
T ss_pred HHHHHHHHhCCCcE--EEecCCCH------HHHHHHHHcCCCEEEEC---------cHHHHHH---hcCCCCCCCCCHHH
Confidence 35677777776653 34455555 34555688899999997 3111111 111 1258899
Q ss_pred HHHHHHHhhccCCCcEEEEe---cCcchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhH-HHHHHH
Q 021527 127 ILSMLKEVVPQMSCPIALFT---YYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEET-ESLQKE 187 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~---Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~-~~~~~~ 187 (311)
.+..++.|.+.+++||++.. |-|+. ...+-++.+.++|++||.+=|- |.+|. .+++..
T Consensus 71 m~~~~~~I~r~~~~PviaD~d~Gyg~~~---~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa 147 (298)
T 3eoo_A 71 VLVDANRITNATNLPLLVDIDTGWGGAF---NIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAA 147 (298)
T ss_dssp HHHHHHHHHHHCCSCEEEECTTCSSSHH---HHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCeEEEECCCCCCCHH---HHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHH
Confidence 99999999888899998863 43322 1234567788899999999652 34443 334333
Q ss_pred HHHc-CCCeEEEeCCCC--------hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEe--
Q 021527 188 AMKN-KIELVLFTTPTT--------PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVG-- 256 (311)
Q Consensus 188 ~~~~-gi~~I~lisp~t--------~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG-- 256 (311)
.... +.+.++..=-.. ..+|.+.+.+..-..+|+.+ .+ + .+.++++.+.+++|+.+.
T Consensus 148 ~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~---~~--------~-~ee~~~~~~~~~~Pl~~n~~ 215 (298)
T 3eoo_A 148 VDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEA---MK--------T-LDDYRRFKEAVKVPILANLT 215 (298)
T ss_dssp HHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECC---CC--------S-HHHHHHHHHHHCSCBEEECC
T ss_pred HHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCC---CC--------C-HHHHHHHHHHcCCCeEEEec
Confidence 3222 444444331111 12666777665556677643 11 1 245666666667898663
Q ss_pred -eCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 257 -FGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 257 -fGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
+|-+-.-+++++.++|..-|+.|..+.+..
T Consensus 216 ~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa 246 (298)
T 3eoo_A 216 EFGSTPLFTLDELKGANVDIALYCCGAYRAM 246 (298)
T ss_dssp TTSSSCCCCHHHHHHTTCCEEEECSHHHHHH
T ss_pred cCCCCCCCCHHHHHHcCCeEEEEchHHHHHH
Confidence 443211246788889999999999888754
No 174
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=97.85 E-value=0.00073 Score=70.10 Aligned_cols=175 Identities=15% Similarity=0.106 Sum_probs=109.1
Q ss_pred CChhhHHHHHHHHHHCCCCE--EEEc--------CCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcE
Q 021527 74 PDLSTTAEALKLLDSCGSDI--IELG--------VPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPI 142 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~--IElG--------~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPi 142 (311)
-+.++.+++++.|++.|+++ ||+| +||... .| ++.++++++. .++++
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e---~p-------------------~e~l~~l~~~~~~~~l 179 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYE---CP-------------------WRRLQELRELIPNIPF 179 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCC---CH-------------------HHHHHHHHHHCSSSCE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCC---CH-------------------HHHHHHHHHHcccchH
Confidence 45688999999999997666 9998 555311 11 2344444433 34566
Q ss_pred EEEecC-cch-----hccCHHHHHHHHHHcCCcEEEecCCC--hhhHHHHHHHHHHcCCCeEEEeC-------CC---Ch
Q 021527 143 ALFTYY-NPI-----LKRGVDNFMSTVRDIGIRGLVVPDVP--LEETESLQKEAMKNKIELVLFTT-------PT---TP 204 (311)
Q Consensus 143 ilm~Y~-n~i-----~~~g~~~fi~~~~~aGadGviipDlp--~ee~~~~~~~~~~~gi~~I~lis-------p~---t~ 204 (311)
..+.-. |.+ -....++|++.+.++|+|.+-+.|-. ++......+.+++.|......++ |. .+
T Consensus 180 ~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~ 259 (718)
T 3bg3_A 180 QMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYS 259 (718)
T ss_dssp EEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTC
T ss_pred HHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCC
Confidence 544321 111 11114789999999999998887643 23455667788889976443332 21 13
Q ss_pred HHHHHH----HHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE----eeCCCCHHHHHHHHHcCCcE
Q 021527 205 TDRMKA----IVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV----GFGISKPEHVQQVAGWGADG 275 (311)
Q Consensus 205 ~eri~~----i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v----GfGIst~e~v~~v~~~GADG 275 (311)
.+...+ +.+..-..|++....|. ..|..+.++++.+|+.+ ++||-+ .+|... .+.-..+++|||.
T Consensus 260 ~e~~~~~a~~l~~~Ga~~I~l~DT~G~-----~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAv-ANslaAveAGa~~ 333 (718)
T 3bg3_A 260 LQYYMGLAEELVRAGTHILCIKDMAGL-----LKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGV-AAMLACAQAGADV 333 (718)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECTTSC-----CCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHH-HHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcCCC-----cCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHH-HHHHHHHHhCCCE
Confidence 344333 33334455777665553 34677889999999987 688766 455553 4555667899987
Q ss_pred E
Q 021527 276 V 276 (311)
Q Consensus 276 v 276 (311)
|
T Consensus 334 V 334 (718)
T 3bg3_A 334 V 334 (718)
T ss_dssp E
T ss_pred E
Confidence 6
No 175
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=97.84 E-value=0.00015 Score=67.64 Aligned_cols=165 Identities=23% Similarity=0.332 Sum_probs=97.0
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..++.++.+.+.|||+|-+|...+.|-++.-. ..-.++.+...++.++++ ++||-+.+|-
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~----------~~eE~~Rv~pvI~~l~~~-~vpiSIDT~~------ 112 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVP----------VEEEKRRLLPVLEAVLSL-GVPVSVDTRK------ 112 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC---------------------CCHHHHHHHHHHHHHTT-CSCEEEECSC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCC----------HHHHHHHHHHHHHHHHhC-CCeEEEECCC------
Confidence 45677889999999999999999977777433211 112344567788888876 9999999873
Q ss_pred CHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC----CCCh----------HHH-------HHHHHH
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT----PTTP----------TDR-------MKAIVE 213 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis----p~t~----------~er-------i~~i~~ 213 (311)
-+-++.+.++|++ |+.|..-+...++.+.++++|...|.+-. |.+. +++ ++...
T Consensus 113 --~~Va~aAl~aGa~--iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~- 187 (294)
T 2dqw_A 113 --PEVAEEALKLGAH--LLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRAL- 187 (294)
T ss_dssp --HHHHHHHHHHTCS--EEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHH-
T ss_pred --HHHHHHHHHhCCC--EEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHH-
Confidence 3456778888999 67776544334677888999988777643 3332 222 22222
Q ss_pred hCCce--EEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHH
Q 021527 214 ASEGF--VYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQV 268 (311)
Q Consensus 214 ~a~gf--iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v 268 (311)
..|+ +++-...|. |. . .....++++++++. .+.|+++ |+|+..-+.++
T Consensus 188 -~~Gi~~IilDPG~Gf-~k--t-~~~n~~ll~~l~~~~~~g~Pvl~--G~Srksfig~l 239 (294)
T 2dqw_A 188 -SAGVPQVVLDPGFGF-GK--L-LEHNLALLRRLDEIVALGHPVLV--GLSRKRTIGEL 239 (294)
T ss_dssp -HTTCSCEEEECCTTS-SC--C-HHHHHHHHHTHHHHHTTSSCBEE--CCTTCHHHHHH
T ss_pred -HCCCCcEEEcCCCCc-cc--C-HHHHHHHHHHHHHHhcCCCCEEE--Eeccchhhhhh
Confidence 2343 666554442 22 1 12334566666553 5789988 45554434333
No 176
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=97.83 E-value=0.00026 Score=66.15 Aligned_cols=157 Identities=17% Similarity=0.267 Sum_probs=96.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccC
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRG 155 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g 155 (311)
.+..++.++.+.+.|||+|-+|...+.|-++.-..+.-. +.+...++.+++.+++||.+.+|-
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~----------~RvvpvI~~l~~~~~vpiSIDT~~------- 124 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEI----------KRVVPMIQAVSKEVKLPISIDTYK------- 124 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHH----------HHHHHHHHHHHHHSCSCEEEECSC-------
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHH----------HHHHHHHHHHHhcCCceEEEeCCC-------
Confidence 467889999999999999999998877755432222221 234567788887789999999873
Q ss_pred HHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEEEeCCCC------hHHH-------HHHHHHhCCc----
Q 021527 156 VDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVLFTTPTT------PTDR-------MKAIVEASEG---- 217 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~lisp~t------~~er-------i~~i~~~a~g---- 217 (311)
.+-++.+.++|++- +.|+.-+. ..++.+.++++|...|.+-...+ .+++ ++... ..|
T Consensus 125 -~~V~~aAl~aGa~i--INdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~--~~GI~~~ 199 (297)
T 1tx2_A 125 -AEVAKQAIEAGAHI--INDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAK--DAGVRDE 199 (297)
T ss_dssp -HHHHHHHHHHTCCE--EEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHH--HTTCCGG
T ss_pred -HHHHHHHHHcCCCE--EEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHH--HcCCChh
Confidence 34566777789885 45554332 34567788999988777654221 1122 22222 233
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeC
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFG 258 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfG 258 (311)
-+++-...|. |.. .....++++++++. .+.|+++|-.
T Consensus 200 ~IilDPg~Gf-gk~---~~~n~~ll~~l~~l~~lg~Pvl~G~S 238 (297)
T 1tx2_A 200 NIILDPGIGF-AKT---PEQNLEAMRNLEQLNVLGYPVLLGTS 238 (297)
T ss_dssp GEEEECCTTS-SCC---HHHHHHHHHTGGGGGGGCSCBEEECT
T ss_pred cEEEeCCCCc-CCC---HHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 3566555543 321 22334666666554 4789988653
No 177
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.82 E-value=0.00028 Score=67.53 Aligned_cols=129 Identities=20% Similarity=0.217 Sum_probs=87.9
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCC-CeEEEeCCCChHHHHHHHHHhCC
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKI-ELVLFTTPTTPTDRMKAIVEASE 216 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi-~~I~lisp~t~~eri~~i~~~a~ 216 (311)
+++|++.- +.......++...+.+.|.-|++-.++++++..+....+++.+- .....+.... .++++.+.+..-
T Consensus 44 l~~Pii~a----pM~~vt~~~lA~avA~~GGlgii~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~-~e~a~~l~eaGa 118 (361)
T 3khj_A 44 LKIPLISS----AMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVNE-IERAKLLVEAGV 118 (361)
T ss_dssp ESSSEEEC----SSTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHHTTCCCCEEEECTTC-HHHHHHHHHTTC
T ss_pred cCCCEEee----cCCCCCcHHHHHHHHHcCCCeEEecCCCHHHHHHHHHHHHhccCceEEEEeCCCH-HHHHHHHHHcCc
Confidence 57787773 33323345777777888888888888888887777777776552 2233333333 677777766444
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.++.+-+.. +.+..+.+.++++|+..++||++| ++.++++++++.++|||+++||
T Consensus 119 d~I~ld~a~-------G~~~~~~~~i~~i~~~~~~~Vivg-~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 119 DVIVLDSAH-------GHSLNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp SEEEECCSC-------CSBHHHHHHHHHHHHHCCCEEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred CeEEEeCCC-------CCcHHHHHHHHHHHHhcCCcEEEc-cCCCHHHHHHHHHcCcCEEEEe
Confidence 444321211 223456678999988778999875 5678999999999999999996
No 178
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=97.82 E-value=0.00095 Score=61.11 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=104.8
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+...+.++.+.+.|||+|-+|.-. .|+ | ..+++-+.+..|++..++|+.+.+|-
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~-~~v-~----------------~~ee~~rvv~~i~~~~~~pisIDT~~------ 78 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGP-AVQ-D----------------KVSAMEWLVEVTQEVSNLTLCLDSTN------ 78 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC------C----------------HHHHHHHHHHHHHTTCCSEEEEECSC------
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCC-CCC-C----------------hHHHHHHHHHHHHHhCCCeEEEeCCC------
Confidence 56788999999999999999999511 110 0 11233445666666679999999872
Q ss_pred CHHHHHHHHHHc--CCcEEEecCCCh--hhHHHHHHHHHHcCCCeEEEeC-----CCChHHHHHHH---HH--hCCce--
Q 021527 155 GVDNFMSTVRDI--GIRGLVVPDVPL--EETESLQKEAMKNKIELVLFTT-----PTTPTDRMKAI---VE--ASEGF-- 218 (311)
Q Consensus 155 g~~~fi~~~~~a--GadGviipDlp~--ee~~~~~~~~~~~gi~~I~lis-----p~t~~eri~~i---~~--~a~gf-- 218 (311)
.+-++.+.++ |++- +.|+.- ++..++.+.++++|...|.+-. |.|.+++.... .+ ...|+
T Consensus 79 --~~v~~aAl~a~~Ga~i--INdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~ 154 (262)
T 1f6y_A 79 --IKAIEAGLKKCKNRAM--INSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPM 154 (262)
T ss_dssp --HHHHHHHHHHCSSCEE--EEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCG
T ss_pred --HHHHHHHHhhCCCCCE--EEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCc
Confidence 2345666666 8764 444442 3344678889999987776643 44544443211 11 12333
Q ss_pred --EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEe-----eCCCCHHHH-----HHHHHcCCcEEEE
Q 021527 219 --VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVG-----FGISKPEHV-----QQVAGWGADGVIV 278 (311)
Q Consensus 219 --iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vG-----fGIst~e~v-----~~v~~~GADGvIV 278 (311)
+++-...|.-|.....+..+.+.++++|+.. +.|+.+| ||....+-+ ......|+|.+||
T Consensus 155 ~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksfg~~~~~~l~~t~~~~a~~~g~~~~iv 228 (262)
T 1f6y_A 155 EDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLMSAIA 228 (262)
T ss_dssp GGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 6776655433332222334556677777755 8999997 565322222 2234677887776
No 179
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.82 E-value=0.00027 Score=63.14 Aligned_cols=134 Identities=19% Similarity=0.208 Sum_probs=79.3
Q ss_pred CCCC----hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 72 GDPD----LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 72 G~P~----~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
|+|. .+.-...++...+.|+|.|++-++++. +..| +.+...+.++++++..+ |+.+-..
T Consensus 61 ~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~---------------~~~~-~~~~~~~~i~~v~~a~~-pv~vKvi 123 (225)
T 1mzh_A 61 GFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSA---------------FKSE-KYDFVVEELKEIFRETP-SAVHKVI 123 (225)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH---------------HHTT-CHHHHHHHHHHHHHTCT-TSEEEEE
T ss_pred cCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHH---------------HhcC-ChHHHHHHHHHHHHHhc-CceEEEE
Confidence 5554 344445566777899999997655522 2222 33556777888887766 7655332
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCc
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGV 227 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~ 227 (311)
++. +++..++..++.+.+.+.|.+.| -+.+ || .
T Consensus 124 ~e~-----------------------~~l~~~~~~~~a~~a~eaGad~I--~tst--------------g~--------~ 156 (225)
T 1mzh_A 124 VET-----------------------PYLNEEEIKKAVEICIEAGADFI--KTST--------------GF--------A 156 (225)
T ss_dssp CCG-----------------------GGCCHHHHHHHHHHHHHHTCSEE--ECCC--------------SC--------S
T ss_pred EeC-----------------------CCCCHHHHHHHHHHHHHhCCCEE--EECC--------------CC--------C
Confidence 110 12223333444444444455444 1111 11 0
Q ss_pred cCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcE
Q 021527 228 TGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADG 275 (311)
Q Consensus 228 TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADG 275 (311)
+|. .. .+.++.+++.+ ++||++.+||+|++++.++++.|||-
T Consensus 157 ~gg---a~---~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 157 PRG---TT---LEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADR 200 (225)
T ss_dssp SSC---CC---HHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CCC---CC---HHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchH
Confidence 121 11 25677777765 69999999999999999999999994
No 180
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=97.80 E-value=0.0002 Score=67.48 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=68.7
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcch
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPI 151 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i 151 (311)
+-+.+..++.++.+.+.|||+|-+|...+.| |+.+... -.++.+...|+.+++++ ++||-+.+|-
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrP---G~~v~~~--------eEl~Rv~pvI~~l~~~~~~vpISIDT~~--- 126 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGP---GERVDVD--------TEITRLVPFIEWLRGAYPDQLISVDTWR--- 126 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC-------------CHH--------HHHHHHHHHHHHHHHHSTTCEEEEECSC---
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCC---CCCCCHH--------HHHHHHHHHHHHHHhhCCCCeEEEeCCC---
Confidence 3356889999999999999999999877766 3111110 01223456788888776 8999999873
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT 200 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis 200 (311)
-+-++.+.++|++ ||.|+.-+...++.+.++++|...|.+-.
T Consensus 127 -----~~VaeaAl~aGa~--iINDVsg~~d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 127 -----AQVAKAACAAGAD--LINDTWGGVDPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp -----HHHHHHHHHHTCC--EEEETTSSSSTTHHHHHHHHTCEEEEECC
T ss_pred -----HHHHHHHHHhCCC--EEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 3456778888999 56666543334567788999988777643
No 181
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=97.78 E-value=0.00043 Score=62.61 Aligned_cols=182 Identities=13% Similarity=0.135 Sum_probs=104.8
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
+..|| +-...|+.++..++++.+.. .++++++|.++ +. ..| .+.++++++. +.+
T Consensus 8 ~~~Li--vALD~~~~~~al~l~~~~~~-~v~~~Kvg~~l---------f~-------~~G------~~~v~~L~~~-g~~ 61 (239)
T 3tr2_A 8 DPKVI--VAIDAGTVEQARAQINPLTP-ELCHLKIGSIL---------FT-------RYG------PAFVEELMQK-GYR 61 (239)
T ss_dssp CCCEE--EECCCSSHHHHHHHHTTCCT-TTCEEEEEHHH---------HH-------HHH------HHHHHHHHHT-TCC
T ss_pred CCCeE--EEeCCCCHHHHHHHHHHhCC-cccEEEeCHHH---------HH-------hhC------HHHHHHHHhc-CCC
Confidence 34453 45677899999888888754 48999999766 11 112 3467777654 678
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcC----CCeEE--EeCCCChH---------
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNK----IELVL--FTTPTTPT--------- 205 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~g----i~~I~--lisp~t~~--------- 205 (311)
|++..-+.++-.+ ....++.+.+.|+|.+.++-.. .+-...+++.+++++ ...+. .++..+..
T Consensus 62 iflDlK~~DI~nT-v~~~~~~~~~~gad~vTvh~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~ 140 (239)
T 3tr2_A 62 IFLDLKFYDIPQT-VAGACRAVAELGVWMMNIHISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQE 140 (239)
T ss_dssp EEEEEEECSCHHH-HHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCS
T ss_pred EEEEecccccchH-HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCC
Confidence 8887755444322 2446778899999999996443 233444566666553 12222 22322221
Q ss_pred ---HHHHHHHHhCC--ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC-CcEEEeeCCCCHH----------HHHHHH
Q 021527 206 ---DRMKAIVEASE--GFVYLVSSIGVTGARASISGHVQTLLREIKESST-KPVAVGFGISKPE----------HVQQVA 269 (311)
Q Consensus 206 ---eri~~i~~~a~--gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~-~Pv~vGfGIst~e----------~v~~v~ 269 (311)
+...++++.+. |..=+| .++ ..+..+|+.++ -.+++--||+-.. +..++.
T Consensus 141 ~~~~~v~~~A~~a~~~g~~GvV-----------~s~---~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~ 206 (239)
T 3tr2_A 141 KVPDIVCRMATLAKSAGLDGVV-----------CSA---QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAI 206 (239)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEE-----------CCH---HHHHHHHTTCCTTSEEEECCBC----------CCBCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEE-----------ECc---hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHH
Confidence 11122222211 111111 011 23566788763 3566766664211 256778
Q ss_pred HcCCcEEEEhhHhhc
Q 021527 270 GWGADGVIVGSAMVK 284 (311)
Q Consensus 270 ~~GADGvIVGSaiv~ 284 (311)
++|||.+|||+.|.+
T Consensus 207 ~aGad~lVvGr~I~~ 221 (239)
T 3tr2_A 207 QAGSDYLVIGRPITQ 221 (239)
T ss_dssp HHTCSEEEECHHHHT
T ss_pred HcCCCEEEEChHHhC
Confidence 899999999999998
No 182
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=97.78 E-value=0.0027 Score=57.94 Aligned_cols=195 Identities=19% Similarity=0.302 Sum_probs=119.4
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH--cCCCHHHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA--RGTNFNAIL 128 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~--~G~~~~~~~ 128 (311)
.+.|.++++++++.. .+++=|+ -.++.++++|+|.|=+| |--+-. ..-+. ..+++++.+
T Consensus 9 ~~~lr~l~~~~~~i~--~~~ayD~------~sA~~~~~aG~dai~vg---------~~s~a~--~~G~pD~~~vt~~em~ 69 (255)
T 2qiw_A 9 ATKFASDHESGKLLV--LPTVWDT------WSAGLVEEAGFSGLTIG---------SHPVAD--ATGSSDGENMNFADYM 69 (255)
T ss_dssp HHHHHHHHHTCCCEE--CCEESSH------HHHHHHHHTTCSCEEEC---------HHHHHH--HTTCCTTTCSCHHHHH
T ss_pred HHHHHHHHhCCCcEE--EecCcCH------HHHHHHHHcCCCEEEEC---------hHHHHH--hCCCCCCCCcCHHHHH
Confidence 456888887776532 3333343 45667788999999997 311111 00011 126899999
Q ss_pred HHHHHhhccCCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC---------ChhhHHHHHHHHHHc----C
Q 021527 129 SMLKEVVPQMSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------PLEETESLQKEAMKN----K 192 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------p~ee~~~~~~~~~~~----g 192 (311)
..++.|.+.+++||+.. +|-++. .+-++++.++|++||.+=|- |.+|..+-.+.+.+. |
T Consensus 70 ~~~~~I~r~~~~pviaD~~~Gyg~~~-----~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g 144 (255)
T 2qiw_A 70 AVVKKITSAVSIPVSVDVESGYGLSP-----ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAG 144 (255)
T ss_dssp HHHHHHHHHCSSCEEEECTTCTTCCH-----HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCEEeccCCCcCcHH-----HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999998888999997 454433 45667777899999999774 345554444444444 8
Q ss_pred CCeEEEeCCC----------C-hH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEe--
Q 021527 193 IELVLFTTPT----------T-PT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVG-- 256 (311)
Q Consensus 193 i~~I~lisp~----------t-~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG-- 256 (311)
++.++..--. . -+ +|.+.+.+..-..+|+. |+ +. .+.++++.+..++|+.+-
T Consensus 145 ~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e---~~-------~~--~~~~~~i~~~~~~P~n~~~~ 212 (255)
T 2qiw_A 145 VDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPV---GL-------ST--AEQVERLVDAVSVPVNITAH 212 (255)
T ss_dssp CCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEEC---CC-------CS--HHHHHHHHTTCSSCBEEECB
T ss_pred CCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEc---CC-------CC--HHHHHHHHHhCCCCEEEEec
Confidence 8754432111 0 11 44555544444445553 21 11 256888888778886553
Q ss_pred eCCCCH-HHHHHHHHcCCcEEEEhhH
Q 021527 257 FGISKP-EHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 257 fGIst~-e~v~~v~~~GADGvIVGSa 281 (311)
-|-.+| -.+.++.++|..-|+.|+.
T Consensus 213 ~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 213 PVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp TTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred CCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 222111 2367888899999999988
No 183
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=97.75 E-value=0.00069 Score=62.04 Aligned_cols=194 Identities=16% Similarity=0.228 Sum_probs=110.6
Q ss_pred EeCCCCChhhHHHHHHHHHHCCC-CEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGS-DIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~Ga-D~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
+-...|+.++..++++.+.. .+ +++++|.|+ + +..| .+.++++++. +.+|++..-
T Consensus 9 vALD~~~~~~al~l~~~l~~-~v~~~~KvG~~l---------~-------~~~G------~~~v~~Lk~~-g~~VflDlK 64 (259)
T 3tfx_A 9 VALDLDNEEQLNKILSKLGD-PHDVFVKVGMEL---------F-------YNAG------IDVIKKLTQQ-GYKIFLDLK 64 (259)
T ss_dssp EECCCSCHHHHHHHHHTTCC-GGGCEEEECHHH---------H-------HHHC------HHHHHHHHHT-TCEEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhCc-ccceEEEeCHHH---------H-------HhcC------HHHHHHHHHC-CCcEEEEec
Confidence 56678999999999999864 48 999999666 1 1223 3466677654 788888765
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHc---CC--CeEEEeCCCChH--HHH-----------
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKN---KI--ELVLFTTPTTPT--DRM----------- 208 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~---gi--~~I~lisp~t~~--eri----------- 208 (311)
+.++-.+ ....++.+.+.|+|.+.+.-.. .+-.....+.+++. |- ..++.++-.|+. +.+
T Consensus 65 ~~DIpnT-v~~a~~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~ 143 (259)
T 3tfx_A 65 MHDIPNT-VYNGAKALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMA 143 (259)
T ss_dssp ECSCHHH-HHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHH
T ss_pred ccccchH-HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHH
Confidence 5544321 1345677888999999996433 23344455555542 31 124433222221 111
Q ss_pred ---HHHHHhC--CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCH----H------HHHHHHHcC
Q 021527 209 ---KAIVEAS--EGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKP----E------HVQQVAGWG 272 (311)
Q Consensus 209 ---~~i~~~a--~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~----e------~v~~v~~~G 272 (311)
..+++.+ .|..-+|. ++ +.++.+|+.+ +-.+++--||+-. . +..++.++|
T Consensus 144 e~v~~~A~~a~~~G~dGvV~-----------s~---~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aG 209 (259)
T 3tfx_A 144 EQVLSLAKMAKHSGADGVIC-----------SP---LEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWG 209 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEC-----------CG---GGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEE-----------CH---HHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcC
Confidence 1222221 12211111 11 1256666655 3446666666521 1 267788999
Q ss_pred CcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 273 ADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 273 ADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
||.+|||++|.+. .++.+ .++++.+++++
T Consensus 210 ad~iVvGr~I~~a----~dp~~---a~~~i~~~~~~ 238 (259)
T 3tfx_A 210 SSAIVVGRPITLA----SDPKA---AYEAIKKEFNA 238 (259)
T ss_dssp CSEEEECHHHHTS----SSHHH---HHHHHHHHHTC
T ss_pred CCEEEEChHHhCC----CCHHH---HHHHHHHHHHH
Confidence 9999999999983 23433 34444445543
No 184
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.75 E-value=0.00011 Score=65.88 Aligned_cols=47 Identities=30% Similarity=0.398 Sum_probs=43.3
Q ss_pred HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 238 VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.++++++.+++|+++++||++++++.++++.|||+|++|++...
T Consensus 62 ~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 62 MLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 35678999998899999999999999999999999999999999876
No 185
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=97.75 E-value=0.0022 Score=61.43 Aligned_cols=48 Identities=17% Similarity=0.061 Sum_probs=42.0
Q ss_pred HHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 240 TLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 240 ~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
..|.++++.. ++||++.+||++++++.+.+..|||+|-+|+.+...+.
T Consensus 256 ~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~ 304 (368)
T 3vkj_A 256 ASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI 304 (368)
T ss_dssp HHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 4466777766 59999999999999999999999999999999998664
No 186
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.74 E-value=8.3e-05 Score=67.30 Aligned_cols=79 Identities=23% Similarity=0.350 Sum_probs=61.0
Q ss_pred CChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 202 TTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 202 ~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
..|.+..+.+.+..-..++++...+....+ + ...+.++++.+.+.+|+.+|+||++.|+++++++.|||=|++||+
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~~~---~-~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKDPS---K-RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHCGG---G-CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccccc---h-hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 456676777767665667777655432221 1 224688998888999999999999999999999999999999998
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
.++
T Consensus 107 a~~ 109 (243)
T 4gj1_A 107 AIK 109 (243)
T ss_dssp TTT
T ss_pred ccc
Confidence 876
No 187
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.72 E-value=0.0021 Score=59.87 Aligned_cols=200 Identities=14% Similarity=0.165 Sum_probs=116.4
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH--cCCCHHHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA--RGTNFNAIL 128 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~--~G~~~~~~~ 128 (311)
.+.|.++++++++ +..+++=|+ -.++.++++|+|.|=+| |--+-. ...+. ..+++++.+
T Consensus 8 ~~~lr~l~~~~~~--i~~~~a~D~------~sA~~~~~aG~~ai~vs---------g~~~a~--~lG~pD~~~vt~~em~ 68 (295)
T 1s2w_A 8 TTQLKQMLNSKDL--EFIMEAHNG------LSARIVQEAGFKGIWGS---------GLSVSA--QLGVRDSNEASWTQVV 68 (295)
T ss_dssp HHHHHHHHHSSSC--EEEEEECSH------HHHHHHHHHTCSCEEEC---------CHHHHH--TC---------CHHHH
T ss_pred HHHHHHHHhCCCc--EEEecCCCH------HHHHHHHHcCCCEEEeC---------hHHHHH--hCCCCCCCCCCHHHHH
Confidence 4567777777664 334455555 45666778899999997 221211 00111 126888999
Q ss_pred HHHHHhhccCCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC-----------------ChhhHHHHHHHH
Q 021527 129 SMLKEVVPQMSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV-----------------PLEETESLQKEA 188 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl-----------------p~ee~~~~~~~~ 188 (311)
..++.|.+.+++||++. +|-|+. ...+-++.+.++|++||.+=|- |.+|..+-...+
T Consensus 69 ~~~~~I~~~~~~PviaD~d~Gyg~~~---~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa 145 (295)
T 1s2w_A 69 EVLEFMSDASDVPILLDADTGYGNFN---NARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKAC 145 (295)
T ss_dssp HHHHHHHHTCSSCEEEECCSSCSSHH---HHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEecCCCCCCCHH---HHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHH
Confidence 99999998899998886 454421 2345567778899999998553 333433333334
Q ss_pred HHcCC--CeEEEe-CCCC-----hH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC--CcEEE
Q 021527 189 MKNKI--ELVLFT-TPTT-----PT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST--KPVAV 255 (311)
Q Consensus 189 ~~~gi--~~I~li-sp~t-----~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~--~Pv~v 255 (311)
++... +.++.. +... -+ +|.+.+.+..-..+|+.+ +++ .. +.++++.+..+ +|+++
T Consensus 146 ~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~--~~~-----~~----~~~~~i~~~~~~~~P~i~ 214 (295)
T 1s2w_A 146 KDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHS--KKA-----DP----SDIEAFMKAWNNQGPVVI 214 (295)
T ss_dssp HHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECC--CSS-----SS----HHHHHHHHHHTTCSCEEE
T ss_pred HHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcC--CCC-----CH----HHHHHHHHHcCCCCCEEE
Confidence 43332 222221 1111 12 455566554444555542 110 11 34555555444 89887
Q ss_pred e---eCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 256 G---FGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 256 G---fGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
. ||-.+ +.++.++|..-|+.|....+..
T Consensus 215 ~~~~~~~~~---~~eL~~lGv~~v~~~~~~~raa 245 (295)
T 1s2w_A 215 VPTKYYKTP---TDHFRDMGVSMVIWANHNLRAS 245 (295)
T ss_dssp CCSTTTTSC---HHHHHHHTCCEEEECSHHHHHH
T ss_pred eCCCCCCCC---HHHHHHcCCcEEEEChHHHHHH
Confidence 5 44443 6788889999999999888744
No 188
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.71 E-value=0.0018 Score=60.28 Aligned_cols=201 Identities=16% Similarity=0.257 Sum_probs=119.8
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNA 126 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~ 126 (311)
.+.|.++++++++ +..+++=|+ -.++.++++|+|+|=+| |--+-.+ ++. ..+++++
T Consensus 6 ~~~lr~l~~~~~~--i~~~~a~D~------~sA~~~~~aG~~ai~vs---------~~~~a~~---~~G~pD~~~vt~~e 65 (295)
T 1xg4_A 6 GKAFRAALTKENP--LQIVGTINA------NHALLAQRAGYQAIYLS---------GGGVAAG---SLGLPDLGISTLDD 65 (295)
T ss_dssp HHHHHHHHHHSSS--EEEEECSSH------HHHHHHHHTTCSCEEEC---------HHHHHHT---TTCCCSSSCSCHHH
T ss_pred HHHHHHHHhCCCc--EEEecCcCH------HHHHHHHHcCCCEEEEC---------chHhhhh---hcCCCCCCCCCHHH
Confidence 3457777766654 334455554 45677788999999997 3212110 110 1268999
Q ss_pred HHHHHHHhhccCCCcEEEEe---cC-cchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhHHHHHHH
Q 021527 127 ILSMLKEVVPQMSCPIALFT---YY-NPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEETESLQKE 187 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~---Y~-n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~~~~~~~ 187 (311)
.+..++.|.+.+++||++.. |- |+.. ..+-++.+.++|++||.+=|- |.++..+-...
T Consensus 66 m~~~~~~I~~~~~~PviaD~d~Gyg~~~~~---~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~A 142 (295)
T 1xg4_A 66 VLTDIRRITDVCSLPLLVDADIGFGSSAFN---VARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRA 142 (295)
T ss_dssp HHHHHHHHHHHCCSCEEEECTTCSSSSHHH---HHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCEEecCCcccCCCHHH---HHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHH
Confidence 99999999988899988874 43 3221 234566777899999999653 23343333333
Q ss_pred HHHcCC--CeEEEe-CCCCh-------HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEe-
Q 021527 188 AMKNKI--ELVLFT-TPTTP-------TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVG- 256 (311)
Q Consensus 188 ~~~~gi--~~I~li-sp~t~-------~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG- 256 (311)
+++... +.++.. +...- .+|.+.+.+..-..+|+. |++ + .+.++++.+..++|+++.
T Consensus 143 a~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e---~~~------~---~~~~~~i~~~~~iP~~~N~ 210 (295)
T 1xg4_A 143 AVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPE---AIT------E---LAMYRQFADAVQVPILANI 210 (295)
T ss_dssp HHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEET---TCC------S---HHHHHHHHHHHCSCBEEEC
T ss_pred HHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEe---CCC------C---HHHHHHHHHHcCCCEEEEe
Confidence 333332 322222 11111 245555555444445543 221 1 256777777778998653
Q ss_pred --eCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 257 --FGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 257 --fGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
||-+-.-+.+++.++|++.|++|.++.+..
T Consensus 211 ~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa 242 (295)
T 1xg4_A 211 TEFGATPLFTTDELRSAHVAMALYPLSAFRAM 242 (295)
T ss_dssp CSSSSSCCCCHHHHHHTTCSEEEESSHHHHHH
T ss_pred cccCCCCCCCHHHHHHcCCCEEEEChHHHHHH
Confidence 333322356788899999999999888644
No 189
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.70 E-value=0.0001 Score=66.51 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhh
Q 021527 204 PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 204 ~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv 283 (311)
+.+.++.+.+..-..+++..... .|...+ ...+.++++++.+++|+++++||++++++.++++.|||+|++|+++.
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~-~~~~~g---~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDR-DGTKSG---YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTT-SSCSSC---CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCc-ccCCCc---ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 34555555554445555543221 111111 12478999999899999999999999999999999999999999988
No 190
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.69 E-value=0.003 Score=58.58 Aligned_cols=202 Identities=21% Similarity=0.241 Sum_probs=126.6
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFN 125 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~ 125 (311)
-...|.++++++++. ..+++=|+ -.++.++++|+|.|=+| |--+-.+ .+. ..++++
T Consensus 9 ~~~~lr~l~~~~~~i--~~~~a~D~------~sA~i~e~aGf~ai~vs---------~s~~a~~---~lG~pD~~~vt~~ 68 (287)
T 3b8i_A 9 LRAMFRALLDSSRCY--HTASVFDP------MSARIAADLGFECGILG---------GSVASLQ---VLAAPDFALITLS 68 (287)
T ss_dssp HHHHHHHHHHSSCCE--ECEECCSH------HHHHHHHHTTCSCEEEC---------HHHHHHH---HHSCCSSSCSCHH
T ss_pred HHHHHHHHHhCCCcE--EEecCCCH------HHHHHHHHcCCCEEEeC---------cHHHHHH---hcCCCCCCCCCHH
Confidence 345788888776643 33444444 45677788999999997 4322211 121 226899
Q ss_pred HHHHHHHHhhccCCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC--------------ChhhHHHHHHHH
Q 021527 126 AILSMLKEVVPQMSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV--------------PLEETESLQKEA 188 (311)
Q Consensus 126 ~~~~~i~~ir~~~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl--------------p~ee~~~~~~~~ 188 (311)
+.+..++.|.+.+++||++. +|-|+. ...+-++.+.++|++||.+=|- |.+|..+-.+.+
T Consensus 69 em~~~~~~I~r~~~~PviaD~d~Gyg~~~---~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa 145 (287)
T 3b8i_A 69 EFVEQATRIGRVARLPVIADADHGYGNAL---NVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAA 145 (287)
T ss_dssp HHHHHHHHHHTTCSSCEEEECTTCSSSHH---HHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCHH---HHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHH
Confidence 99999999999999998886 343322 1234566777899999999664 335655555666
Q ss_pred HHcCCC--eEEEe-CCCC------hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-eeC
Q 021527 189 MKNKIE--LVLFT-TPTT------PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV-GFG 258 (311)
Q Consensus 189 ~~~gi~--~I~li-sp~t------~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-GfG 258 (311)
.+.++. .++.. +... ..+|.+.+.+..-..+|+.. + +. .+.++++.+..++|+++ .||
T Consensus 146 ~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~---~-------~~--~~~~~~i~~~~~~P~ii~~~g 213 (287)
T 3b8i_A 146 LEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVG---V-------RD--FAHLEAIAEHLHIPLMLVTYG 213 (287)
T ss_dssp HHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEEC---C-------CS--HHHHHHHHTTCCSCEEEECTT
T ss_pred HHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecC---C-------CC--HHHHHHHHHhCCCCEEEeCCC
Confidence 666552 22211 1111 12566666554444566542 2 11 25688888888899763 334
Q ss_pred CCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 259 ISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 259 Ist~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
-+..-+++++.++|..-|+.|..+.+.-
T Consensus 214 ~~~~~~~~eL~~lGv~~v~~~~~~~raa 241 (287)
T 3b8i_A 214 NPQLRDDARLARLGVRVVVNGHAAYFAA 241 (287)
T ss_dssp CGGGCCHHHHHHTTEEEEECCCHHHHHH
T ss_pred CCCCCCHHHHHHcCCcEEEEChHHHHHH
Confidence 3222246788889999999999888643
No 191
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.69 E-value=0.0084 Score=55.24 Aligned_cols=198 Identities=16% Similarity=0.177 Sum_probs=119.1
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH--cCCCHHHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA--RGTNFNAIL 128 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~--~G~~~~~~~ 128 (311)
.+.|.+++++ + +..+++=|+ -.++.++++|+|.|=+| |--+-. ..-+. ..+++++.+
T Consensus 7 ~~~lr~l~~~-~---i~~~~a~D~------~sA~~~~~aG~~ai~vs---------g~s~a~--~~G~pD~~~vt~~em~ 65 (275)
T 2ze3_A 7 ARSFHALHQT-G---FLLPNAWDV------ASARLLEAAGFTAIGTT---------SAGIAH--ARGRTDGQTLTRDEMG 65 (275)
T ss_dssp HHHHHHHHHH-C---EEECEESSH------HHHHHHHHHTCSCEEEC---------HHHHHH--HSCCCSSSSSCHHHHH
T ss_pred HHHHHHHhhC-C---eeEecccCH------HHHHHHHHcCCCEEEEC---------cHHHHH--hCCCCCCCCCCHHHHH
Confidence 3467777664 2 445555554 45666778899999997 322221 10010 126899999
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCH---HHHHHHHHHcCCcEEEecCC---------ChhhHHHHHHHHHHc----C
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGV---DNFMSTVRDIGIRGLVVPDV---------PLEETESLQKEAMKN----K 192 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~---~~fi~~~~~aGadGviipDl---------p~ee~~~~~~~~~~~----g 192 (311)
..++.|.+.+++||++..-+- |..+. .+-++.+.++|++||.+=|- |.+|..+-.+.+++. |
T Consensus 66 ~~~~~I~~~~~~pviaD~d~G--yg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g 143 (275)
T 2ze3_A 66 REVEAIVRAVAIPVNADIEAG--YGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASG 143 (275)
T ss_dssp HHHHHHHHHCSSCEEEECTTC--SSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCCCEEeecCCC--CCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcC
Confidence 999999988889999974211 11123 34566777899999999764 345544444444444 8
Q ss_pred CCeEEEeCCCC--------h----H---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEee
Q 021527 193 IELVLFTTPTT--------P----T---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGF 257 (311)
Q Consensus 193 i~~I~lisp~t--------~----~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGf 257 (311)
++.++..-... + + +|.+.+.+..-..+|+. ++ +. .+.++++.+..++|+.+-.
T Consensus 144 ~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e---~~-------~~--~~~~~~i~~~~~~P~n~~~ 211 (275)
T 2ze3_A 144 VPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVP---LA-------LQ--SQDIRALADALRVPLNVMA 211 (275)
T ss_dssp SCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECT---TC-------CC--HHHHHHHHHHCSSCEEEEC
T ss_pred CCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEEC---CC-------CC--HHHHHHHHHhcCCCEEEec
Confidence 87554431111 1 1 34444444333334432 11 11 2567777777788875532
Q ss_pred --CCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 258 --GISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 258 --GIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
+.-+ ++++.++|..-|+.|..+.+..
T Consensus 212 ~~~~~~---~~eL~~lGv~~v~~~~~~~raa 239 (275)
T 2ze3_A 212 FPGSPV---PRALLDAGAARVSFGQSLMLAT 239 (275)
T ss_dssp CTTSCC---HHHHHHTTCSEEECTTHHHHHH
T ss_pred CCCCCC---HHHHHHcCCcEEEEChHHHHHH
Confidence 3333 5788889999999999988754
No 192
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.68 E-value=0.0001 Score=65.68 Aligned_cols=75 Identities=23% Similarity=0.215 Sum_probs=54.4
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+..+.+.+..-.++++....+..+ +.. .. +.++++++.+++|+.+++||++++++..+++.|||+|++|++...
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~~---~~~-~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAFG---RGS-NH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHTT---SCC-CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCccccc---CCC-hH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 3444444444444566554333221 112 23 789999998999999999999999999999999999999998765
No 193
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.67 E-value=0.011 Score=55.25 Aligned_cols=201 Identities=15% Similarity=0.170 Sum_probs=119.2
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNA 126 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~ 126 (311)
.+.|.++..++++ .+...++=|+ -.++.++++|+|.|=++ |--+-.+ .+. ..+++++
T Consensus 6 ~~~Lr~ll~~~~~-~i~~~~a~D~------~sA~l~e~aGf~ai~vs---------G~~~a~~---~~G~pD~~~vt~~e 66 (302)
T 3fa4_A 6 ATSLRRALENPDS-FIVAPGVYDG------LSARVALSAGFDALYMT---------GAGTAAS---VHGQADLGICTLND 66 (302)
T ss_dssp HHHHHHHHHSTTC-CEEEEEECSH------HHHHHHHTTTCSCEEEC---------HHHHHHH---HHSCCSSSCCCHHH
T ss_pred HHHHHHHHhCCCC-eEEEecCcCH------HHHHHHHHcCCCEEEeC---------cHHHHHH---HcCCCCCCcCCHHH
Confidence 4566666655543 2333344444 45667788999999994 3222111 121 1268899
Q ss_pred HHHHHHHhhcc-CCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhHH-HHHH
Q 021527 127 ILSMLKEVVPQ-MSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEETE-SLQK 186 (311)
Q Consensus 127 ~~~~i~~ir~~-~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~~-~~~~ 186 (311)
.+..++.|.+. .++||++. +|.|+. ...+-++.+.++|+.||.+=|- |.+|.. +++.
T Consensus 67 m~~~~~~I~~~~~~~PviaD~d~Gyg~~~---~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~A 143 (302)
T 3fa4_A 67 MRANAEMISNISPSTPVIADADTGYGGPI---MVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRA 143 (302)
T ss_dssp HHHHHHHHHTTSTTSCEEEECTTTTSSHH---HHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCEEEECCCCCCCHH---HHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHH
Confidence 99999998775 48999987 455532 1345677888899999999663 344533 3333
Q ss_pred HHH---HcCCCeEEEeCCCC--------hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEE
Q 021527 187 EAM---KNKIELVLFTTPTT--------PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVA 254 (311)
Q Consensus 187 ~~~---~~gi~~I~lisp~t--------~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~ 254 (311)
... +.+.+.++..=-.+ ..+|.+.+.+..-..+|... .+ + .+.++++.+.. ++|+.
T Consensus 144 a~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g---~~------~---~~ei~~~~~~~~~~Pl~ 211 (302)
T 3fa4_A 144 AVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEG---IT------S---REMARQVIQDLAGWPLL 211 (302)
T ss_dssp HHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETT---CC------C---HHHHHHHHHHTTTSCEE
T ss_pred HHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecC---CC------C---HHHHHHHHHHhcCCcee
Confidence 322 23666555432111 13666666665555666542 21 1 24466665554 47876
Q ss_pred Ee---eCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 255 VG---FGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 255 vG---fGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+. +|-...-.+.++.++|..-|+.|..+.+.
T Consensus 212 ~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 212 LNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp EECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred EEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 63 33221123667788899999999888774
No 194
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.67 E-value=0.00058 Score=70.09 Aligned_cols=155 Identities=15% Similarity=0.179 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHHCCCCEEEE--cCCC----------CCCCCChHHHHHHHHHHHHcCCCHH----HHHHHHHHhhccC--
Q 021527 77 STTAEALKLLDSCGSDIIEL--GVPY----------SDPLADGPVIQAAATRSLARGTNFN----AILSMLKEVVPQM-- 138 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IEl--G~Pf----------sDP~aDGp~Iq~a~~~Al~~G~~~~----~~~~~i~~ir~~~-- 138 (311)
+.+.+.++.+.++|.|+||| +.+| ++---| +.|-+++ -.+++++.+|+.+
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D------------~yGGs~enR~r~~~ei~~avr~~~g~ 223 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTD------------EYGGSLENRMRLLRELLEDTLDECAG 223 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCS------------TTSSSHHHHTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCcc------------ccCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 57888999999999999999 2222 222223 1222332 3467888888775
Q ss_pred CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 139 SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
+.||.+-.-.+..+.. .+..++..++.+.+.+ +++.+-+..-+ -.+. .....+
T Consensus 224 ~~~v~~r~s~~~~~~~--------------------g~~~~~~~~~~~~l~~-~~d~~~v~~~~-~~~~-----~~~~~~ 276 (690)
T 3k30_A 224 RAAVACRITVEEEIDG--------------------GITREDIEGVLRELGE-LPDLWDFAMGS-WEGD-----SVTSRF 276 (690)
T ss_dssp SSEEEEEEECCCCSTT--------------------SCCHHHHHHHHHHHTT-SSSEEEEECSC-HHHH-----TCCTTT
T ss_pred CceEEEEECccccCCC--------------------CCCHHHHHHHHHHHHh-hcCEEEEeccc-cccc-----CCCCcc
Confidence 5677765322211111 1223555556666655 56655443321 1010 000000
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
. ... ...++++++|+.+++||++.+||++++++.++++.| ||.|-+|-+++.
T Consensus 277 ---------~--~~~---~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 277 ---------A--PEG---RQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp ---------C--CTT---TTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ---------C--Ccc---ccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh
Confidence 0 001 123678889999999999999999999999999988 999999988764
No 195
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=97.67 E-value=0.00035 Score=64.79 Aligned_cols=157 Identities=17% Similarity=0.278 Sum_probs=98.4
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..++.++.+.+.|||+|-+|...+.|-++--..+. .++.+...++.+++++++||-+.+|-
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~e----------E~~rv~pvi~~l~~~~~~piSIDT~~------ 99 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEE----------ELQRVIPVVEAIAQRFEVWISVDTSK------ 99 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHH----------HHHHHHHHHHHHHHHCCCEEEEECCC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHH----------HHHHHHHHHHHHHhhcCCeEEEeCCC------
Confidence 45788999999999999999999977666443111110 11234567888887789999998873
Q ss_pred CHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC---CCCh-------------H----HHHHHHHHh
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT---PTTP-------------T----DRMKAIVEA 214 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis---p~t~-------------~----eri~~i~~~ 214 (311)
.+-++.+.++|++- |.|..-+...++.+.++++|...|.+-. |.+. . ++++...
T Consensus 100 --~~va~aAl~aGa~i--INdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~-- 173 (282)
T 1aj0_A 100 --PEVIRESAKVGAHI--INDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE-- 173 (282)
T ss_dssp --HHHHHHHHHTTCCE--EEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHH--
T ss_pred --HHHHHHHHHcCCCE--EEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHH--
Confidence 34677788889885 4554432233466778899998887653 3331 1 1222222
Q ss_pred CCc----eEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEee
Q 021527 215 SEG----FVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGF 257 (311)
Q Consensus 215 a~g----fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGf 257 (311)
..| -+++-...|. |. ......++++++++. .+.|+++|-
T Consensus 174 ~~Gi~~~~IilDPg~gf-~k---~~~~n~~ll~~l~~~~~~g~P~l~G~ 218 (282)
T 1aj0_A 174 QAGIAKEKLLLDPGFGF-GK---NLSHNYSLLARLAEFHHFNLPLLVGM 218 (282)
T ss_dssp HTTCCGGGEEEECCTTS-SC---CHHHHHHHHHTGGGGGGGCSCBEECC
T ss_pred HcCCChhhEEEeCCCCc-cc---CHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 233 3666665553 32 122335667776654 478998854
No 196
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.67 E-value=0.00019 Score=64.15 Aligned_cols=47 Identities=30% Similarity=0.388 Sum_probs=43.4
Q ss_pred HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 238 VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.++++++.+++|+++++||++++++.++++.|||+|++|+++..
T Consensus 63 ~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 63 LLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 34678999998999999999999999999999999999999999875
No 197
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=97.66 E-value=0.0005 Score=64.57 Aligned_cols=161 Identities=12% Similarity=0.119 Sum_probs=100.7
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEE-EecCcchhccC
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL-FTYYNPILKRG 155 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiil-m~Y~n~i~~~g 155 (311)
+...+.++.+.+.|||+|-+|...++|-+. .++.++..+.++.+++.+++|+.+ .+ -|+-+.
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~--------------~vs~eee~~vV~~v~~~~~vplsI~DT-~~~~~~-- 136 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQ--------------NRSGAELAEVCKAVADAIDVPLMIIGC-GVEEKD-- 136 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTT--------------CCCHHHHHHHHHHHHHHCSSCEEEECC-SCHHHH--
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCC--------------CCCHHHHHHHHHHHHHhCCceEEEECC-CCCCCC--
Confidence 357788899999999999999988888433 255667777899998889999999 66 111111
Q ss_pred HHHHHHHHHHcCCc-EEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CCce----EEEEecCCcc
Q 021527 156 VDNFMSTVRDIGIR-GLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SEGF----VYLVSSIGVT 228 (311)
Q Consensus 156 ~~~fi~~~~~aGad-GviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~gf----iY~vs~~G~T 228 (311)
.+-++.+.++|++ --|+.|..-+...++.+.++++|...|.+ ++.. .+.++++.+. ..|+ |++-...|.-
T Consensus 137 -~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m-~~~d-v~~l~~~~~~a~~~Gi~~e~IilDPg~g~~ 213 (310)
T 2h9a_B 137 -AEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVAS-APLD-INLSKQLNIMIMEMNLAPNRIIMDPLIGAL 213 (310)
T ss_dssp -HHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEE-CSSC-HHHHHHHHHHHHTTTCCGGGEEEECCCCCT
T ss_pred -HHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEE-ChhH-HHHHHHHHHHHHHCCCChhhEEEeCCCccc
Confidence 3456778888886 33456655455667888889999876654 4322 2222222221 3454 7776655532
Q ss_pred CCCCCCCchHHHHHHH--Hhhc--CCCcEEEee
Q 021527 229 GARASISGHVQTLLRE--IKES--STKPVAVGF 257 (311)
Q Consensus 229 G~~~~~~~~~~~~l~~--vk~~--~~~Pv~vGf 257 (311)
|....-.....+.+++ +.+. .+.|+++|-
T Consensus 214 g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~ 246 (310)
T 2h9a_B 214 GYGIEYSYSIIERMRLGALTGDKILAMPVVCFI 246 (310)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECH
T ss_pred cCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEc
Confidence 3211111123455665 3322 478999976
No 198
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=97.65 E-value=0.0032 Score=57.15 Aligned_cols=193 Identities=19% Similarity=0.248 Sum_probs=115.8
Q ss_pred HHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 021527 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKE 133 (311)
Q Consensus 54 f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ 133 (311)
|++..++|++.+-.++..+.| +.++.+...|+|++-++...+ | .-. ++.-..+..
T Consensus 10 ~k~~l~~g~~~~~~~l~v~~p------~~~e~a~~~gaD~v~lDlEd~-p-----~~~-------------~~a~~~~~~ 64 (256)
T 1dxe_A 10 FKAALAAKQVQIGCWSALSNP------ISTEVLGLAGFDWLVLDGEHA-P-----NDI-------------STFIPQLMA 64 (256)
T ss_dssp HHHHHHTTCCEEEEEECSCSH------HHHHHHTTSCCSEEEEESSSS-S-----CCH-------------HHHHHHHHH
T ss_pred HHHHHHCCCCeEEEEEeCCCH------HHHHHHHhCCCCEEEEcCCCC-C-----CCH-------------HHHHHHHHH
Confidence 333334577666667766555 677788899999999985544 3 211 122223444
Q ss_pred hhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHH----------------------
Q 021527 134 VVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMK---------------------- 190 (311)
Q Consensus 134 ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~---------------------- 190 (311)
+.. ...|+++-.-.+ . ..+++.+.++|++||++|-.- .+|...+.+.++.
T Consensus 65 ~~~-~~~~~~VRv~~~-----~-~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~ 137 (256)
T 1dxe_A 65 LKG-SASAPVVRVPTN-----E-PVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVAD 137 (256)
T ss_dssp TTT-CSSEEEEECSSS-----C-HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTT
T ss_pred HHh-CCCcEEEECCCC-----C-HHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHH
Confidence 432 456777765332 1 234788889999999999763 3566666655531
Q ss_pred ------cCCCeEEEeCCCChH--HHHHHHHHh-CCceEEEE-----ecCCccCCCCCCCchHHHHHHHHhhc---CCCcE
Q 021527 191 ------NKIELVLFTTPTTPT--DRMKAIVEA-SEGFVYLV-----SSIGVTGARASISGHVQTLLREIKES---STKPV 253 (311)
Q Consensus 191 ------~gi~~I~lisp~t~~--eri~~i~~~-a~gfiY~v-----s~~G~TG~~~~~~~~~~~~l~~vk~~---~~~Pv 253 (311)
..+.++.++ .|+. +.+.+|++. .-.++++. ...|..+. ...+.+...++++-.. .++|+
T Consensus 138 ~~~~~~~~~~v~~~I--Et~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~--~~~p~v~~a~~~iv~aa~a~G~~~ 213 (256)
T 1dxe_A 138 YFAQSNKNITILVQI--ESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGN--ASHPDVQKAIQHIFNRASAHGKPS 213 (256)
T ss_dssp HHHHHTTSCEEEEEE--CSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTC--TTSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHhcCcccEEEEEE--CCHHHHHhHHHHhCCCCCCEEEEChHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHhCCce
Confidence 124445555 4543 557777652 12355553 13343332 2345565566655332 37887
Q ss_pred EEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 254 AVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 254 ~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+ +. .+++.+....+.|.+-+.+|+-..-
T Consensus 214 ~v-~~-~d~~~~~~~~~~G~~~~s~~~d~~~ 242 (256)
T 1dxe_A 214 GI-LA-PVEADARRYLEWGATFVAVGSDLGV 242 (256)
T ss_dssp EE-EC-CSHHHHHHHHHTTCCEEEEEEHHHH
T ss_pred EE-ec-CCHHHHHHHHHcCCCEEEechHHHH
Confidence 54 33 4799999999999999999976543
No 199
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=97.65 E-value=0.00098 Score=61.69 Aligned_cols=170 Identities=18% Similarity=0.218 Sum_probs=97.5
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchh
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPIL 152 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~ 152 (311)
+-+.+..++.++.+.+.|||+|-+|...+.|-++...-+ -.++.+...++.+++. ++||-+.+|-
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~----------eE~~Rv~pvi~~l~~~-~~piSIDT~~---- 89 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPA----------VETSRVIPVVKELAAQ-GITVSIDTMR---- 89 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC------------------------HHHHHHHHHHHHHT-TCCEEEECSC----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHH----------HHHHHHHHHHHHhhcC-CCEEEEeCCC----
Confidence 346788999999999999999999987766643321111 2334556788888766 8999998873
Q ss_pred ccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEEEeC---CCChH------------------HHHHH
Q 021527 153 KRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVLFTT---PTTPT------------------DRMKA 210 (311)
Q Consensus 153 ~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~lis---p~t~~------------------eri~~ 210 (311)
.+-++.+.++|++- |.|+.-+. ..++.+.++++|...|.+-. |.+.. ++++.
T Consensus 90 ----~~va~aAl~aGa~i--INdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~ 163 (280)
T 1eye_A 90 ----ADVARAALQNGAQM--VNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVAD 163 (280)
T ss_dssp ----HHHHHHHHHTTCCE--EEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHcCCCE--EEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHH
Confidence 34677888889875 45544222 23567778899998887653 33211 22322
Q ss_pred HHHhC--CceEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHH
Q 021527 211 IVEAS--EGFVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVA 269 (311)
Q Consensus 211 i~~~a--~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~ 269 (311)
..+.. ..-|++-...|. |. . .....++++++++. .+.|+++ |+|+..-+.+++
T Consensus 164 a~~~Gi~~~~IilDPg~Gf-~k--~-~~~n~~ll~~l~~~~~~g~Pvl~--G~Srksfi~~~~ 220 (280)
T 1eye_A 164 AVAAGVDPARLVLDPGLGF-AK--T-AQHNWAILHALPELVATGIPVLV--GASRKRFLGALL 220 (280)
T ss_dssp HHHTTCCGGGEEEECCTTS-SC--C-HHHHHHHHHTHHHHHTTSSCBEE--CCTTCHHHHHHT
T ss_pred HHHcCCChhhEEEECCCCc-cc--C-HHHHHHHHHHHHHhhcCCCCEEE--EecchHHHHhhh
Confidence 22211 113666665542 21 1 22234455555443 5789988 555544444443
No 200
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=97.64 E-value=0.0023 Score=60.66 Aligned_cols=196 Identities=13% Similarity=0.098 Sum_probs=115.4
Q ss_pred HHHHHHHHHHH-cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 49 GLAETFTRLKK-QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 49 ~i~~~f~~~~~-~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
++.++++..++ +|+..+-.|+..+.| +.++.+...|+|+|-|+... +|.-. ++.
T Consensus 27 ~lk~~l~~~~~~~g~~~ig~~l~i~~p------~~~e~a~~~GaD~vilDlEh------a~~~~-------------e~~ 81 (339)
T 1izc_A 27 NLRQALKDAMADPSKTLMGVAHGIPST------FVTKVLAATKPDFVWIDVEH------GMFNR-------------LEL 81 (339)
T ss_dssp CHHHHHHHHHHCGGGCEEEEEECSCCH------HHHHHHHHTCCSEEEEETTT------SCCCH-------------HHH
T ss_pred HHHHHHHhhhccCCCeEEEEEEECCCH------HHHHHHHhCCCCEEEEECCC------CCCcH-------------HHH
Confidence 35555442222 456666667766655 67777888999999998443 32211 112
Q ss_pred HHHHHHhhc--cCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHH--------------
Q 021527 128 LSMLKEVVP--QMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMK-------------- 190 (311)
Q Consensus 128 ~~~i~~ir~--~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~-------------- 190 (311)
.+.+..+.. ..+.|+++-.- .. +. ..++.+.++|++||++|-+- .||..++++.++.
T Consensus 82 ~~~l~a~~~~~~~~~~~~VRv~--~~---~~-~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~ 155 (339)
T 1izc_A 82 HDAIHAAQHHSEGRSLVIVRVP--KH---DE-VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFS 155 (339)
T ss_dssp HHHHHHHHHHTTTCSEEEEECC--TT---CH-HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCB
T ss_pred HHHHHHhhhcCCCCCeEEEEeC--CC---CH-HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhc
Confidence 233444331 12367777653 22 12 46788888999999999764 4666777766643
Q ss_pred cC--------------------CCeEEEeCCCChH--HHHHHHHHh-CCceEEEEe-----c--------CCccCCCCCC
Q 021527 191 NK--------------------IELVLFTTPTTPT--DRMKAIVEA-SEGFVYLVS-----S--------IGVTGARASI 234 (311)
Q Consensus 191 ~g--------------------i~~I~lisp~t~~--eri~~i~~~-a~gfiY~vs-----~--------~G~TG~~~~~ 234 (311)
+| +.++.++ .|+. +.+.+|++. .-.++++.+ . .|..+
T Consensus 156 ~G~~~~~~~~~~~~y~~~a~~~i~vi~mI--Et~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~----- 228 (339)
T 1izc_A 156 PGIADASLFPNDPYNVATSNNHVCIIPQI--ESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVP----- 228 (339)
T ss_dssp TTTBCCCSSTTCTTCHHHHHHHCEEEEEE--CSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCC-----
T ss_pred ccccccccccchhhhhhhcCcCceEEEEE--ChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCC-----
Confidence 11 2244444 4443 557777642 123555531 1 33322
Q ss_pred CchHHHHHHHHhhc---CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 235 SGHVQTLLREIKES---STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 235 ~~~~~~~l~~vk~~---~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.+...++++-.. .++|+ |.-..+++++......|.|++++++-+..
T Consensus 229 ~p~v~~a~~~iv~aaraaGk~~--g~~~~d~~~a~~~~~~Gf~~l~~~~di~~ 279 (339)
T 1izc_A 229 HPTFVEAMTKFSTAAQRNGVPI--FGGALSVDMVPSLIEQGYRAIAVQFDVWG 279 (339)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCE--EEECSSGGGHHHHHHTTEEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCce--eEecCCHHHHHHHHHhCCCEEEecHHHHH
Confidence 45566666665332 37887 44446789999999999999999985544
No 201
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=97.63 E-value=0.015 Score=53.73 Aligned_cols=192 Identities=19% Similarity=0.284 Sum_probs=116.8
Q ss_pred HHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 021527 54 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKE 133 (311)
Q Consensus 54 f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ 133 (311)
|++.-+.|+..+-.|+..+.| +.++.+...|+|+|-++..-+ |. ..+++..+++.
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p------~~~e~a~~~GaD~v~lDlEh~------~~-------------~~~~~~~~l~a 84 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSS------YSAELLAGAGFDWLLIDGEHA------PN-------------NVQTVLTQLQA 84 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCH------HHHHHHHTSCCSEEEEESSSS------SC-------------CHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEEEEECCCH------HHHHHHHhCCCCEEEEeCCCc------cc-------------hHHHHHHHHHH
Confidence 333334677677778887777 677888899999999985543 21 11233334444
Q ss_pred hhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHH-----c----------------
Q 021527 134 VVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMK-----N---------------- 191 (311)
Q Consensus 134 ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~-----~---------------- 191 (311)
+.. ...|+++-.-.+ .. ..++.+.++|++||++|-.- .||..++.+.++. .
T Consensus 85 ~~~-~~~~~~VRv~~~-----d~-~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~ 157 (287)
T 2v5j_A 85 IAP-YPSQPVVRPSWN-----DP-VQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIP 157 (287)
T ss_dssp HTT-SSSEEEEECSSS-----CH-HHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTST
T ss_pred HHh-cCCCEEEEECCC-----CH-HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchh
Confidence 432 366777765432 11 26778888999999999764 3556666554421 0
Q ss_pred --------CCCeEEEeCCCChH--HHHHHHHHhCCc--eEEEE-----ecCCccCCCCCCCchHHHHHHHHhhc---CCC
Q 021527 192 --------KIELVLFTTPTTPT--DRMKAIVEASEG--FVYLV-----SSIGVTGARASISGHVQTLLREIKES---STK 251 (311)
Q Consensus 192 --------gi~~I~lisp~t~~--eri~~i~~~a~g--fiY~v-----s~~G~TG~~~~~~~~~~~~l~~vk~~---~~~ 251 (311)
.+.++.++ .|+. +.+.+|++ ..+ ++++. ...|..+. ...+.+...++++-.. .++
T Consensus 158 ~y~~~~~~~~~vi~mI--Et~~av~n~deIaa-~~~vD~l~iG~~DLs~~lg~~~~--~~~p~v~~a~~~iv~aaraaG~ 232 (287)
T 2v5j_A 158 DYLQKANDQMCVLVQI--ETREAMKNLPQILD-VEGVDGVFIGPADLSADMGYAGN--PQHPEVQAAIEQAIVQIRESGK 232 (287)
T ss_dssp THHHHHHHHCEEEEEE--CSHHHHHTHHHHHT-STTEEEEEECHHHHHHHTTSTTC--CCSHHHHHHHHHHHHHHHHTTS
T ss_pred hhHhhcCCCcEEEEEE--CcHHHHHHHHHHhC-cCCCCEEEECHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHcCC
Confidence 14445555 4543 55777764 334 44442 13343332 2345566556655332 368
Q ss_pred cEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 252 PVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 252 Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+.+ + ..+++.+....+.|++-+.+|+-..-
T Consensus 233 ~~gv-~-~~d~~~a~~~~~~G~~~~s~~~d~~~ 263 (287)
T 2v5j_A 233 APGI-L-IANEQLAKRYLELGALFVAVGVDTTL 263 (287)
T ss_dssp EEEE-E-CCCHHHHHHHHHTTCSEEEEEEHHHH
T ss_pred eeEE-e-cCCHHHHHHHHHhCCCEEEECcHHHH
Confidence 7644 3 35899999999999999999986544
No 202
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=97.63 E-value=0.0028 Score=59.03 Aligned_cols=185 Identities=17% Similarity=0.171 Sum_probs=108.3
Q ss_pred cEEEEEeC----CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--
Q 021527 64 ALIPYITA----GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-- 137 (311)
Q Consensus 64 ~li~yi~~----G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-- 137 (311)
.+.+.+|| |.-|.+.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++.+.+.
T Consensus 20 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttG----E~~------------~Ls~~Er~~v~~~~~~~~~ 83 (304)
T 3cpr_A 20 VGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTG----ESP------------TTTAAEKLELLKAVREEVG 83 (304)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTT----TTT------------TSCHHHHHHHHHHHHHHHT
T ss_pred eEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc----Chh------------hCCHHHHHHHHHHHHHHhC
Confidence 44445555 556778999999999999999998741110 111 13445555566655543
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTD 206 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~e 206 (311)
-++||+.-+-.|... ..-+..+.+.++|+||+++. - ...++..+ |...+...++..+++=.| +.+.+
T Consensus 84 grvpviaGvg~~st~--~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~ 161 (304)
T 3cpr_A 84 DRAKLIAGVGTNNTR--TSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESD 161 (304)
T ss_dssp TTSEEEEECCCSCHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHH
T ss_pred CCCcEEecCCCCCHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHH
Confidence 368988876554332 12356778899999999883 1 12244444 455666678877665333 23446
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHh
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSai 282 (311)
-+.++++ -..++.+=. .+| ++ ..+.++++.++.-|+.|.. +.+-..+..|+||+|-|++=
T Consensus 162 ~~~~La~-~pnIvgiKd---ssg-------d~-~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~an 221 (304)
T 3cpr_A 162 TMRRLSE-LPTILAVXD---AKG-------DL-VAATSLIKETGLAWYSGDD----PLNLVWLALGGSGFISVIGH 221 (304)
T ss_dssp HHHHHTT-STTEEEEEE---CSC-------CH-HHHHHHHHHHCCEEEECSG----GGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHc-CCCEEEEec---CCC-------CH-HHHHHHHHhcCEEEEECcH----HHHHHHHHCCCCEEEecHHH
Confidence 5656654 244443311 111 11 2344443322566666653 34556667899999999773
No 203
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.63 E-value=0.00056 Score=60.92 Aligned_cols=166 Identities=19% Similarity=0.220 Sum_probs=97.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCH
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGV 156 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~ 156 (311)
++..++++.+.. -++++++|.|| -...| .+.++++++..+.||++..-+.++-.+ .
T Consensus 11 ~~al~l~~~l~~-~v~~~KvG~~l----------------~~~~G------~~~v~~L~~~~g~~VflDlK~~DIpnT-v 66 (215)
T 3ve9_A 11 PIPEETLRKLNG-KVAGIKVGWPL----------------LLNLG------KEKVKELVGLVDGIKILDLKLADIDNT-M 66 (215)
T ss_dssp CCCHHHHHHHHT-TSSEEEEEHHH----------------HHHHC------HHHHHHHHTTCCSEEEEEEEECSCHHH-H
T ss_pred HHHHHHHHHhCC-cCcEEEecHHH----------------HHhhC------HHHHHHHHHhcCCcEEEEecccCchhH-H
Confidence 667888888864 58999999666 11223 346777776458899998755544322 1
Q ss_pred HHHHHHHHHcCCcEEEecCCCh-hh-HHHHHHHHHHcCCCeEEEeCCCCh------HHHHHHHHHhCCceEEEEecCCcc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPL-EE-TESLQKEAMKNKIELVLFTTPTTP------TDRMKAIVEASEGFVYLVSSIGVT 228 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~-ee-~~~~~~~~~~~gi~~I~lisp~t~------~eri~~i~~~a~gfiY~vs~~G~T 228 (311)
...++.+.+. +|.+.++-..- .+ ...+ ++|-.++.+.+-+.+ .++..+.++.. |..-+|.
T Consensus 67 ~~a~~~~~~~-ad~vTvh~~~G~~~~~~~~-----~~~~~v~vLts~s~~~~~~~~v~~~a~~a~~~-G~~GvV~----- 134 (215)
T 3ve9_A 67 ILIVDELKDI-TNSFIAHAFVGVEGSLASL-----SQRVDLFLVLSMSHPGWNDAFYPYLREVARRV-NPKGFVA----- 134 (215)
T ss_dssp HHHHHHHTTT-CSEEEEEGGGCTTTTHHHH-----HHHSEEEEECCCSSTTCCGGGHHHHHHHHHHH-CCSEEEC-----
T ss_pred HHHHHHHHHh-hheEEEeCCCCcHHHHHhH-----hcCCCEEEEEecCCcchHHHHHHHHHHHHHHc-CCCceee-----
Confidence 3355667778 99999864332 22 2222 123233333332211 12333333322 2221121
Q ss_pred CCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHH--HHHHHHHcCCcEEEEhhHhhch
Q 021527 229 GARASISGHVQTLLREIKESSTKPVAVGFGISKPE--HVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 229 G~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e--~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+. ..+ +.++++|+.++-.+++-.||+ ++ +..++.+.|+|-+|||..|.+.
T Consensus 135 sa---t~~---~e~~~ir~~~~~f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 135 PA---TRP---SMISRVKGDFPDKLVISPGVG-TQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp CT---TSH---HHHHHHHHHCTTSEEEECCTT-STTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred CC---CCH---HHHHHHHHhCCCcEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 11 111 357788886633788888997 35 6778888999999999999983
No 204
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.61 E-value=0.0012 Score=63.29 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=86.2
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe---CCCChHHHHHHHHHh
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT---TPTTPTDRMKAIVEA 214 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li---sp~t~~eri~~i~~~ 214 (311)
+++||+.- +...-...++...+.++|.=|+|-..+++|+..+....+++.+--.+... .+. ..++++.+.+.
T Consensus 45 l~~Pii~a----pM~~vs~~~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~-~~~~~~~liea 119 (366)
T 4fo4_A 45 LNIPMVSA----SMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKISGGLRVGAAVGAAPG-NEERVKALVEA 119 (366)
T ss_dssp ESSSEEEC----CCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTTTSCCCEEECCSCTT-CHHHHHHHHHT
T ss_pred cCCCEEeC----CCCCCChHHHHHHHHHcCCceEeecCCCHHHHHHHHHHHHhcCceeEEEEeccChh-HHHHHHHHHhC
Confidence 57887663 23222335778788888888888778888887777777777542122221 222 25777777665
Q ss_pred CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 215 SEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 215 a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.-.++.+-+..| .++...+.++++|+.. ++||++|. +.|+++++++.++|||+++||
T Consensus 120 Gvd~I~idta~G-------~~~~~~~~I~~ik~~~p~v~Vi~G~-v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 120 GVDVLLIDSSHG-------HSEGVLQRIRETRAAYPHLEIIGGN-VATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp TCSEEEEECSCT-------TSHHHHHHHHHHHHHCTTCEEEEEE-ECSHHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEeCCCC-------CCHHHHHHHHHHHHhcCCCceEeee-eCCHHHHHHHHHcCCCEEEEe
Confidence 444443322211 2345667889998876 78887754 567999999999999999995
No 205
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.61 E-value=0.00065 Score=70.30 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEc--C---------CCCCCCCC--hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 77 STTAEALKLLDSCGSDIIELG--V---------PYSDPLAD--GPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG--~---------PfsDP~aD--Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
+.+.+.++.+.++|.|+|||- . |.++---| |--+.+- .+-.+++++.+|+.+ +.|
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR----------~r~~~eiv~avr~~vg~~~p 218 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENR----------ARFWLETLEKVKHAVGSDCA 218 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHH----------THHHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHH----------hHHHHHHHHHHHHHhCCCce
Confidence 578889999999999999993 2 44332233 1112211 123467888888876 788
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
|.+-.-.+..+. -.| +. .++..++.+.+.+ +++.+-+..-... + ....
T Consensus 219 v~vrls~~~~~~--------------~~G-----~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~-~----~~~~------ 267 (729)
T 1o94_A 219 IATRFGVDTVYG--------------PGQ-----IEAEVDGQKFVEMADS-LVDMWDITIGDIA-E----WGED------ 267 (729)
T ss_dssp EEEEEEEECSSC--------------TTS-----CCTTTHHHHHHHHHGG-GCSEEEEEECCST-T----GGGT------
T ss_pred EEEEEccccCcC--------------CCC-----CCchHHHHHHHHHHHh-hcCEEEEeeeccc-c----cccc------
Confidence 887532111100 001 11 2344455555554 4554433221110 0 0000
Q ss_pred EEecCCccCCCCCCCch-HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 221 LVSSIGVTGARASISGH-VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~-~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
+......++. ..++++++|+.+++||++.+||++++++.++++.| ||+|-+|.+++.
T Consensus 268 -------~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 268 -------AGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp -------SCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred -------cCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 0000000111 24678899999999999999999999999999988 999999998764
No 206
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.61 E-value=0.0011 Score=59.12 Aligned_cols=169 Identities=15% Similarity=0.175 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC-cEEEEecCcchhccCH
Q 021527 78 TTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC-PIALFTYYNPILKRGV 156 (311)
Q Consensus 78 ~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i-Piilm~Y~n~i~~~g~ 156 (311)
+..++++.+.. .++++++|.|| + ...| .+.++++++..+. +|++..-+.++-.+ .
T Consensus 14 ~al~l~~~l~~-~v~~~KvG~~l---------~-------~~~G------~~~v~~L~~~~~~~~VflDlK~~DI~nT-v 69 (222)
T 4dbe_A 14 LSYQVLKEMEN-ELYGIKVGLPL---------V-------LDLG------VDKTRELLIGLDVEEIIVDFKLADIGYI-M 69 (222)
T ss_dssp CCHHHHHHHGG-GCSEEEEEHHH---------H-------HHHC------HHHHHHHHHTCCCSEEEEEEEECSCHHH-H
T ss_pred HHHHHHHHhCC-cCcEEEECHHH---------H-------HhhC------HHHHHHHHHhcCCCeEEEEeeecchHHH-H
Confidence 77788888765 49999999766 1 1123 3466666654477 88887655444222 1
Q ss_pred HHHHHHHHHcCCcEEEecCCC--hhhHHHHHHHHHHcCCCeEEEeCCCChH------HHHHHHHHhCCceEEEEecCCcc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVP--LEETESLQKEAMKNKIELVLFTTPTTPT------DRMKAIVEASEGFVYLVSSIGVT 228 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp--~ee~~~~~~~~~~~gi~~I~lisp~t~~------eri~~i~~~a~gfiY~vs~~G~T 228 (311)
..+++.+.+. |.+.++-.. .+-...+.+.++++|..+..+.+-+.+. ++..+.++.. |...+|.
T Consensus 70 ~~~~~~~~~~--d~vTVh~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~-g~~GvV~----- 141 (222)
T 4dbe_A 70 KSIVERLSFA--NSFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREI-SPKGIVV----- 141 (222)
T ss_dssp HHHHTTCTTC--SEEEEESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHH-CCSEEEE-----
T ss_pred HHHHHHHHhC--CEEEEEcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHh-CCCEEEE-----
Confidence 2334444444 888886443 2345567777777775443333322110 2333333322 2222221
Q ss_pred CCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHH--HHHHHHHcCCcEEEEhhHhhch
Q 021527 229 GARASISGHVQTLLREIKESSTKPVAVGFGISKPE--HVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 229 G~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e--~v~~v~~~GADGvIVGSaiv~~ 285 (311)
+. ..+ +.++.+|+.++-.+++--||+ ++ +..++.+.|+|.+|||-.|++.
T Consensus 142 sa---t~p---~e~~~ir~~~~~~~~vtPGI~-~~g~tp~~a~~~Gad~iVVGR~I~~A 193 (222)
T 4dbe_A 142 GG---TKL---DHITQYRRDFEKMTIVSPGMG-SQGGSYGDAVCAGADYEIIGRSIYNA 193 (222)
T ss_dssp CT---TCH---HHHHHHHHHCTTCEEEECCBS-TTSBCTTHHHHHTCSEEEECHHHHTS
T ss_pred CC---CCH---HHHHHHHHhCCCCEEEcCCcc-cCccCHHHHHHcCCCEEEECHHhcCC
Confidence 11 111 357778876633566766775 23 4556677999999999999983
No 207
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.60 E-value=0.00014 Score=64.93 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=54.0
Q ss_pred hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhh
Q 021527 204 PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 204 ~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv 283 (311)
+.+..+.+.+..-.++++....|... +. ... +.++++++.+++|+++++||++++++..+++.|||+|++|+...
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~---~~-~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFG---TG-DNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHT---SC-CCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhc---CC-ChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHh
Confidence 33444444443344555544333221 11 223 67999999899999999999999999999999999999999866
Q ss_pred c
Q 021527 284 K 284 (311)
Q Consensus 284 ~ 284 (311)
.
T Consensus 109 ~ 109 (244)
T 1vzw_A 109 E 109 (244)
T ss_dssp H
T ss_pred h
Confidence 5
No 208
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.59 E-value=0.0016 Score=61.40 Aligned_cols=201 Identities=14% Similarity=0.148 Sum_probs=118.7
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNA 126 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~ 126 (311)
.+.|.++++++++ +..+++=|+ -.++.++++|+|.|=+| |--+-.+ .+. ..+++++
T Consensus 28 ~~~lr~l~~~~~~--i~~~~ayD~------~sA~i~e~aGfdai~vs---------~~~~a~~---~lG~pD~~~vt~~e 87 (318)
T 1zlp_A 28 KTTMHRLIEEHGS--VLMPGVQDA------LSAAVVEKTGFHAAFVS---------GYSVSAA---MLGLPDFGLLTTTE 87 (318)
T ss_dssp CCHHHHHHHHSSS--EEEEEECSH------HHHHHHHHTTCSEEEEC---------HHHHHHH---HHCCCSSSCSCHHH
T ss_pred HHHHHHHHhCCCc--EEEecCCCH------HHHHHHHHcCCCEEEEC---------cHHHhhH---hcCCCCCCCCCHHH
Confidence 3456666666654 334455454 45677788999999997 4222211 121 1268999
Q ss_pred HHHHHHHhhccC-CCcEEEEe---cCcchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhHHHHHHH
Q 021527 127 ILSMLKEVVPQM-SCPIALFT---YYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEETESLQKE 187 (311)
Q Consensus 127 ~~~~i~~ir~~~-~iPiilm~---Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~~~~~~~ 187 (311)
.+..++.|.+.+ ++||++.. |-|+. ...+-++.+.++|++||.+=|- |.+|..+-.+.
T Consensus 88 m~~~~~~I~r~~~~~PviaD~d~Gyg~~~---~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~A 164 (318)
T 1zlp_A 88 VVEATRRITAAAPNLCVVVDGDTGGGGPL---NVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAA 164 (318)
T ss_dssp HHHHHHHHHHHSSSSEEEEECTTCSSSHH---HHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCEEEeCCCCCCCHH---HHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHH
Confidence 999999998877 99999984 43321 1234566777899999999653 23343322233
Q ss_pred HHHcC--CCeEEEe-CCCCh-------HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE--
Q 021527 188 AMKNK--IELVLFT-TPTTP-------TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV-- 255 (311)
Q Consensus 188 ~~~~g--i~~I~li-sp~t~-------~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-- 255 (311)
+++.. -+.++.. +.... .+|.+.+.+..-..+|+.. + + + .+.++++.+..++|+++
T Consensus 165 a~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~---~-------~-~-~e~~~~i~~~l~~P~lan~ 232 (318)
T 1zlp_A 165 AREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEA---P-------A-N-VDELKEVSAKTKGLRIANM 232 (318)
T ss_dssp HHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECC---C-------C-S-HHHHHHHHHHSCSEEEEEE
T ss_pred HHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcC---C-------C-C-HHHHHHHHHhcCCCEEEEe
Confidence 33322 1222222 11111 2455555554444555532 1 1 1 25677777777899854
Q ss_pred -eeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 256 -GFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 256 -GfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
.||-+..-+++++.++|..-|+.|.++.+..
T Consensus 233 ~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa 264 (318)
T 1zlp_A 233 IEGGKTPLHTPEEFKEMGFHLIAHSLTAVYAT 264 (318)
T ss_dssp CTTSSSCCCCHHHHHHHTCCEEEECSHHHHHH
T ss_pred ccCCCCCCCCHHHHHHcCCeEEEEchHHHHHH
Confidence 3443222246788889999999999888644
No 209
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=97.55 E-value=0.015 Score=52.18 Aligned_cols=191 Identities=19% Similarity=0.241 Sum_probs=105.3
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcC-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe-c
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGV-PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT-Y 147 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~-Y 147 (311)
.+|--+. +.++. .++|+|++=+-+ |-| | +-++.+ .+++|.+....|+.+-+ .
T Consensus 25 ICGit~~----ed~~a-~~~gaD~iGfIf~~~S-p----------------R~V~~~----~A~~i~~~~~~~~~~v~v~ 78 (228)
T 4aaj_A 25 ICGIKSL----EELEI-VEKHADATGVVVNSNS-K----------------RRIPLE----KAREIIENSAIPVFLVSTM 78 (228)
T ss_dssp ECCCCSH----HHHHH-HHTTCSEEEEECSSSS-T----------------TBCCHH----HHHHHHHHCSSCEEEEECC
T ss_pred ECCCCcH----HHHHH-HHcCCCEEEEEecCCC-C----------------CCCCHH----HHHHHHHhhCCCCEEEecc
Confidence 5666554 44543 468999986544 222 2 113333 33444444445544332 2
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCC----ChHHHH----HHHHHhCCce
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPT----TPTDRM----KAIVEASEGF 218 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~----t~~eri----~~i~~~a~gf 218 (311)
.| .++..+.+.+.+.|.+=+. |.+++.+..+++ +.|+..+--+... .+.+.. ..+....-.+
T Consensus 79 v~------~~ei~~~i~~~~ld~vQLHG~E~~~~~~~l~~---~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~ 149 (228)
T 4aaj_A 79 VG------FSEWAMAIERTGAQYIQVHSNALPQTIDTLKK---EFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADM 149 (228)
T ss_dssp CC------HHHHHHHHHHHTCSEEEECSCCCHHHHHHHHH---HHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSE
T ss_pred Cc------hHHHHHHHHhccchheecccccCHHHHHHHhh---ccCceEEEEEEecccccchhhhHHHHHHHHhccCCCE
Confidence 22 4556667788899988775 666565555543 4477665433221 122222 1221212222
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhhHhhchhhhcCCchhHHH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAG-WGADGVIVGSAMVKLLGEAQSPEEGLK 297 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGSaiv~~~~~~~~~~~~~~ 297 (311)
++....|.||.. ++.+ +++.+.. +.|++..+|++ ||||.++++ .+.+||=|=|.+... + ....+
T Consensus 150 -~LlDs~GGtG~~--fDW~---~~~~~~~--~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGVEs~-G-----~KD~~ 214 (228)
T 4aaj_A 150 -VLLDTGAGSGKL--HDLR---VSSLVAR--KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGVEKY-G-----IKDPK 214 (228)
T ss_dssp -EEEEC---------CCCH---HHHHHHH--HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGEET-T-----EECHH
T ss_pred -EccCCCCCCcCc--CChH---HHHHhhh--cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCCCCC-C-----CcCHH
Confidence 234445777753 4553 3444433 47999999996 899988765 689999999988741 1 23468
Q ss_pred HHHHHHHHHHhhC
Q 021527 298 ELEKFAKSLKSAL 310 (311)
Q Consensus 298 ~~~~~~~~l~~~~ 310 (311)
++++|++.+|..+
T Consensus 215 KI~~Fi~~vr~v~ 227 (228)
T 4aaj_A 215 LVEEFVRRAKNVV 227 (228)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHhccc
Confidence 8999999998764
No 210
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.52 E-value=0.024 Score=53.03 Aligned_cols=201 Identities=15% Similarity=0.126 Sum_probs=116.2
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNA 126 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~ 126 (311)
.+.|.++..++.. .+..+++=|+ -.++.++++|+|.|=++ |--+-.+ .+. ..+++++
T Consensus 13 a~~lr~ll~~~~~-~i~~~~a~D~------~sA~l~e~aGf~ai~vs---------G~~~a~s---~~G~pD~~~vt~~e 73 (307)
T 3lye_A 13 AKKLRHLLENTDE-LIVCPGVYDG------LSARTAMELGFKSLYMT---------GAGTTAS---RLGQPDLAIAQLHD 73 (307)
T ss_dssp HHHHHHHHHHCCC-CEEEEEECSH------HHHHHHHHTTCSCEEEC---------HHHHHHH---HHCCCSSSCSCHHH
T ss_pred HHHHHHHHhCCCC-eEEEecCcCH------HHHHHHHHcCCCEEEec---------cHHHHHH---hcCCCCCCCCCHHH
Confidence 4556555444322 3334444444 45667788999999994 3222111 121 1268899
Q ss_pred HHHHHHHhhccC--CCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC---------------ChhhH-HHHH
Q 021527 127 ILSMLKEVVPQM--SCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV---------------PLEET-ESLQ 185 (311)
Q Consensus 127 ~~~~i~~ir~~~--~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl---------------p~ee~-~~~~ 185 (311)
.+..++.|.... ++||++. +|.|+. ...+-++.+.++|++||.+=|- |.+|. .+++
T Consensus 74 m~~~~~~i~r~~~~~~PviaD~d~Gyg~~~---~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~ 150 (307)
T 3lye_A 74 MRDNADMIANLDPFGPPLIADMDTGYGGPI---MVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIR 150 (307)
T ss_dssp HHHHHHHHHTSSTTSCCEEEECTTCSSSHH---HHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHH
T ss_pred HHHHHHhhhccCCCCCcEEEECCCCCCCHH---HHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHH
Confidence 999999998754 5999987 455532 2345677888999999999663 33442 2332
Q ss_pred HHH---HHcCCCeEEEeCCCC--------hHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcE
Q 021527 186 KEA---MKNKIELVLFTTPTT--------PTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPV 253 (311)
Q Consensus 186 ~~~---~~~gi~~I~lisp~t--------~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv 253 (311)
... +..|.+.++..=-.. ..+|.+.+.+..-..+|+.. .+ + .+.++++.+.. ++|+
T Consensus 151 Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~---~~------~---~~~~~~i~~~~~~~Pv 218 (307)
T 3lye_A 151 AAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEG---FR------S---KEQAAAAVAALAPWPL 218 (307)
T ss_dssp HHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECC---CS------C---HHHHHHHHHHHTTSCB
T ss_pred HHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecC---CC------C---HHHHHHHHHHccCCce
Confidence 222 223666555432111 13666666665556666642 21 1 13455555543 4777
Q ss_pred EE---eeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 254 AV---GFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 254 ~v---GfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
.+ .+|-...-.++++.++|..-|+.+..+.+.
T Consensus 219 ~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 219 LLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp EEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred eEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 54 344221123567888999999999877763
No 211
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=97.52 E-value=0.00073 Score=62.98 Aligned_cols=160 Identities=16% Similarity=0.249 Sum_probs=98.6
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhc
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILK 153 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~ 153 (311)
-+.+..++.++.+.+.|||+|-+|...+.|-++.-..+.- ++.+...|+.+++. ++||-+.+|-
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE----------~~Rv~pvi~~l~~~-~vpiSIDT~~----- 106 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEE----------LARVIPLVEALRPL-NVPLSIDTYK----- 106 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHH----------HHHHHHHHHHHGGG-CSCEEEECCC-----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHH----------HHHHHHHHHHHhhC-CCeEEEECCC-----
Confidence 3568899999999999999999999776664432111111 23446678888766 8999999873
Q ss_pred cCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC---CCCh-----------HHHHHHHHH---h--
Q 021527 154 RGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT---PTTP-----------TDRMKAIVE---A-- 214 (311)
Q Consensus 154 ~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis---p~t~-----------~eri~~i~~---~-- 214 (311)
.+-++.+.++|++- |.|+.-+...++.+.++++|...|.+-. |.+. .++...+.+ .
T Consensus 107 ---~~Va~aAl~aGa~i--INdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~ 181 (294)
T 2y5s_A 107 ---PAVMRAALAAGADL--INDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALR 181 (294)
T ss_dssp ---HHHHHHHHHHTCSE--EEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHcCCCE--EEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHH
Confidence 34567788889874 5555433333567788999988777643 4432 222221111 1
Q ss_pred CCc----eEEEEecCCccCCCCCCCchHHHHHHHHhhc-------CCCcEEEee
Q 021527 215 SEG----FVYLVSSIGVTGARASISGHVQTLLREIKES-------STKPVAVGF 257 (311)
Q Consensus 215 a~g----fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-------~~~Pv~vGf 257 (311)
..| -|++-...|. |. .......++++++++. .+.|+++|-
T Consensus 182 ~~Gi~~~~IilDPG~Gf-~k--t~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~ 232 (294)
T 2y5s_A 182 DAGVAAERICVDPGFGF-GK--AVVDDNYALLAALPDTAPARPDGRAYPILAGM 232 (294)
T ss_dssp HTTCCGGGEEEECCTTS-SS--CTTHHHHHHHHTGGGGSCBCTTSSBCCBEEEC
T ss_pred HcCCChhhEEEeCCCcc-cc--cchHHHHHHHHHHHHHHhccccCCCCCEEEEe
Confidence 233 3666665553 22 1213345677776653 368998864
No 212
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=97.51 E-value=0.00096 Score=65.44 Aligned_cols=107 Identities=20% Similarity=0.186 Sum_probs=72.2
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc---c--CCCcEEEEecC
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP---Q--MSCPIALFTYY 148 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~---~--~~iPiilm~Y~ 148 (311)
-+.+..++.++.+.+.|||+|-+|...+-|-++....+.- ++.+...|+.+++ + +++||-+.+|-
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE----------~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~ 278 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEE----------FNKLNEFLEYFKSQLANLIYKPLVSIDTRK 278 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHH----------HHHHHHHHHHHHHHTTTCSSCCEEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHH----------HHHHHHHHHHHHhhccccCCCCeEEEeCCC
Confidence 4567899999999999999999999887774432111111 1234556778876 4 48999999873
Q ss_pred cchhccCHHHHHHHHHH--cCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe
Q 021527 149 NPILKRGVDNFMSTVRD--IGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 199 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~--aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li 199 (311)
.+-++.+.+ +|++- .|.|+.-+...++.+.++++|...|.+-
T Consensus 279 --------~~VaeaAL~~~aGa~i-~INDVsg~~d~~m~~v~a~~g~~vVlMh 322 (442)
T 3mcm_A 279 --------LEVMQKILAKHHDIIW-MINDVECNNIEQKAQLIAKYNKKYVIIH 322 (442)
T ss_dssp --------HHHHHHHHHHHGGGCC-EEEECCCTTHHHHHHHHHHHTCEEEEEC
T ss_pred --------HHHHHHHHhhCCCCCE-EEEcCCCCCChHHHHHHHHhCCeEEEEC
Confidence 245666776 88863 1556544444567888899998777653
No 213
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=97.47 E-value=0.014 Score=53.32 Aligned_cols=195 Identities=18% Similarity=0.290 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
+++.+++ +.|++.+-.|+..+.| +.++.+...|+|++-++...+ | .+- +++
T Consensus 7 n~~k~~l----~~g~~~~g~~~~~~~p------~~~e~a~~~GaD~v~lDlE~~-~-~~~-----------------~~~ 57 (267)
T 2vws_A 7 NPFKERL----RKGEVQIGLWLSSTTA------YMAEIAATSGYDWLLIDGEHA-P-NTI-----------------QDL 57 (267)
T ss_dssp CHHHHHH----HTTCCEEEEEECSCCH------HHHHHHHTTCCSEEEEETTTS-C-CCH-----------------HHH
T ss_pred HHHHHHH----HCCCCEEEEEEeCCCH------HHHHHHHhCCCCEEEEcCCCC-C-CCH-----------------HHH
Confidence 4444444 3566667677776655 677788889999999985442 1 111 122
Q ss_pred HHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHH----------------
Q 021527 128 LSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMK---------------- 190 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~---------------- 190 (311)
.+.+..+.. ...|+++-.-.+ . ...++.+.+.|++||++|-.- .||..++.+.++.
T Consensus 58 ~~~~~a~~~-~~~~~~VRv~~~-----~-~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~ 130 (267)
T 2vws_A 58 YHQLQAVAP-YASQPVIRPVEG-----S-KPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAA 130 (267)
T ss_dssp HHHHHHHTT-SSSEEEEECSSC-----C-HHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGG
T ss_pred HHHHHHHHh-CCCcEEEEeCCC-----C-HHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhh
Confidence 234444432 356777765322 1 356788889999999999664 3556656555421
Q ss_pred -c------------CCCeEEEeCCCChH--HHHHHHHHhC-CceEEEE-----ecCCccCCCCCCCchHHHHHHHHhhc-
Q 021527 191 -N------------KIELVLFTTPTTPT--DRMKAIVEAS-EGFVYLV-----SSIGVTGARASISGHVQTLLREIKES- 248 (311)
Q Consensus 191 -~------------gi~~I~lisp~t~~--eri~~i~~~a-~gfiY~v-----s~~G~TG~~~~~~~~~~~~l~~vk~~- 248 (311)
+ .+.++.++ .|+. +.+.+|++.. -.++++. ...|..+. ...+.+...++++-..
T Consensus 131 ~~g~~~~y~~~~~~~~~v~~~I--Et~~av~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~--~~~p~v~~a~~~iv~aa 206 (267)
T 2vws_A 131 RWGRIENYMAQVNDSLCLLVQV--ESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDN--AGHPEVQRIIETSIRRI 206 (267)
T ss_dssp GGGTSTTHHHHHHHHCEEEEEC--CSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSS--CCTHHHHHHHHHHHHHH
T ss_pred hcCcchhhhhhcccccEEEEEE--CCHHHHHHHHHHhCCCCCCEEEEChHHHHHHhCCCCC--CCCHHHHHHHHHHHHHH
Confidence 0 13444444 4543 5677776431 2455553 13444332 2245565556655332
Q ss_pred --CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 249 --STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 249 --~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.++|+.+ + ..+++.+....+.|++-+.+|+-..-
T Consensus 207 ~aaG~~~~v-~-~~d~~~a~~~~~~G~~~~s~~~d~~~ 242 (267)
T 2vws_A 207 RAAGKAAGF-L-AVAPDMAQQCLAWGANFVAVGVDTML 242 (267)
T ss_dssp HHTTCEEEE-E-CSSHHHHHHHHHTTCCEEEEEEHHHH
T ss_pred HHhCCeEEE-e-cCCHHHHHHHHHCCCCEEEEchHHHH
Confidence 3677655 2 35899999999999999999975443
No 214
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=97.45 E-value=0.0058 Score=56.78 Aligned_cols=200 Identities=17% Similarity=0.200 Sum_probs=117.4
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH--cCCCHHHHH
Q 021527 51 AETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA--RGTNFNAIL 128 (311)
Q Consensus 51 ~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~--~G~~~~~~~ 128 (311)
.+.|.++++++++ +..+++=|+ -.++.++++|+|.|=+| |--+..+ ..+. ..+++++.+
T Consensus 4 ~~~lr~l~~~~~~--i~~~~a~D~------~sA~~~~~aG~~ai~vs---------~~~~a~~--~G~pD~~~vt~~em~ 64 (290)
T 2hjp_A 4 NQALRAALDSGRL--FTAMAAHNP------LVAKLAEQAGFGGIWGS---------GFELSAS--YAVPDANILSMSTHL 64 (290)
T ss_dssp HHHHHHHHHHCCC--EEEEECSSH------HHHHHHHHHTCSEEEEC---------HHHHHHH--TTSCTTTCSCHHHHH
T ss_pred HHHHHHHHhCCCc--EEEecCCCH------HHHHHHHHcCCCEEEEC---------hHHHHHh--CCCCCCCCCCHHHHH
Confidence 3467777766654 334555554 45667778999999997 3222111 1111 126899999
Q ss_pred HHHHHhhccCCCcEEEEe---cCcchhccCHHHHHHHHHHcCCcEEEecCC-----------------ChhhHHHHHHHH
Q 021527 129 SMLKEVVPQMSCPIALFT---YYNPILKRGVDNFMSTVRDIGIRGLVVPDV-----------------PLEETESLQKEA 188 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~---Y~n~i~~~g~~~fi~~~~~aGadGviipDl-----------------p~ee~~~~~~~~ 188 (311)
..++.|.+.+++||++.. |-|+. ...+-++.+.++|++||.+=|- |.+|..+-...+
T Consensus 65 ~~~~~I~~~~~~PviaD~d~Gyg~~~---~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa 141 (290)
T 2hjp_A 65 EMMRAIASTVSIPLIADIDTGFGNAV---NVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAA 141 (290)
T ss_dssp HHHHHHHTTCSSCEEEECTTTTSSHH---HHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCHH---HHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHH
Confidence 999999999999988763 33321 1234556777899999998653 223433333333
Q ss_pred HHcCC--CeEEEe-CCCC-----hH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC--CcEEE
Q 021527 189 MKNKI--ELVLFT-TPTT-----PT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST--KPVAV 255 (311)
Q Consensus 189 ~~~gi--~~I~li-sp~t-----~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~--~Pv~v 255 (311)
++... +.++.. +... -+ +|.+.+.+..-..+|+.+. + +. .+.++++.+..+ +|+++
T Consensus 142 ~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~--~-------~~--~~~~~~i~~~~~~~vP~i~ 210 (290)
T 2hjp_A 142 TAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSR--Q-------KT--PDEILAFVKSWPGKVPLVL 210 (290)
T ss_dssp HHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC--C-------SS--SHHHHHHHHHCCCSSCEEE
T ss_pred HHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCC--C-------CC--HHHHHHHHHHcCCCCCEEE
Confidence 33322 222221 2211 12 4555555544444555320 1 11 134667766666 89987
Q ss_pred ee---CCCCHHHHHHHHHcC-CcEEEEhhHhhchh
Q 021527 256 GF---GISKPEHVQQVAGWG-ADGVIVGSAMVKLL 286 (311)
Q Consensus 256 Gf---GIst~e~v~~v~~~G-ADGvIVGSaiv~~~ 286 (311)
.- ..- .++++.++| ..-|+.|..+.+..
T Consensus 211 n~~~~~~~---~~~eL~~lG~v~~v~~~~~~~raa 242 (290)
T 2hjp_A 211 VPTAYPQL---TEADIAALSKVGIVIYGNHAIRAA 242 (290)
T ss_dssp CGGGCTTS---CHHHHHTCTTEEEEEECSHHHHHH
T ss_pred eccCCCCC---CHHHHHhcCCeeEEEechHHHHHH
Confidence 52 122 357888899 99999999888644
No 215
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=97.44 E-value=0.022 Score=53.11 Aligned_cols=220 Identities=12% Similarity=0.155 Sum_probs=136.5
Q ss_pred cCCccEEE-EEeCCCCCh-hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc
Q 021527 60 QGKVALIP-YITAGDPDL-STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ 137 (311)
Q Consensus 60 ~~~~~li~-yi~~G~P~~-~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~ 137 (311)
+|+..+.. |+.|=.++. +.+.+.++.|...+.|.|-+- +.+| |.+-...++++..++++
T Consensus 20 ~~~~~~S~E~fPPk~~~~~~~l~~~~~~l~~l~p~fvsVT------~gag-------------g~~r~~t~~~a~~i~~~ 80 (304)
T 3fst_A 20 QGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVT------YGAN-------------SGERDRTHSIIKGIKDR 80 (304)
T ss_dssp TTCCEEEEEECCCCSHHHHHHHHHHHHHHHTTCCSEEEEC------CCTT-------------SSCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEcCCCCccHHHHHHHHHHHHhcCCCCEEEEe------eCCC-------------CcchhHHHHHHHHHHHH
Confidence 34554444 444444444 336678999999999997773 2233 22223445677788777
Q ss_pred CCCcEEE-EecCcchhccCHHHHHHHHHHcCCcEEEe--cCCCh------hhHHHHHHHHHHcC-CCeEEEeC----CCC
Q 021527 138 MSCPIAL-FTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPL------EETESLQKEAMKNK-IELVLFTT----PTT 203 (311)
Q Consensus 138 ~~iPiil-m~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~------ee~~~~~~~~~~~g-i~~I~lis----p~t 203 (311)
.+++.+. ++..+ .-+..++..+..+.+.|++.++. .|.|- ..+.++.+.+++.+ +..-.-.. |..
T Consensus 81 ~g~~~v~Hltc~~-~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a 159 (304)
T 3fst_A 81 TGLEAAPHLTCID-ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEA 159 (304)
T ss_dssp HCCCEEEEEESTT-SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTC
T ss_pred hCCCeeEEeecCC-CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCC
Confidence 6776554 33332 23345677888899999998886 46553 23667777777643 33222222 333
Q ss_pred h--HHHHHHHH-HhCCceEEEEecCCccCCCCCCC-chHHHHHHHHhhc-CCCcEEEee-CCCCHHHHHHHHHcCCcEEE
Q 021527 204 P--TDRMKAIV-EASEGFVYLVSSIGVTGARASIS-GHVQTLLREIKES-STKPVAVGF-GISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 204 ~--~eri~~i~-~~a~gfiY~vs~~G~TG~~~~~~-~~~~~~l~~vk~~-~~~Pv~vGf-GIst~e~v~~v~~~GADGvI 277 (311)
+ +..+..+. +...|..|++|-. -.+ ..+.++++++|+. .++||+.|. .|.|..++..+.++ -|+-
T Consensus 160 ~~~~~d~~~Lk~KvdAGAdf~iTQ~-------ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~--~Gv~ 230 (304)
T 3fst_A 160 KSAQADLLNLKRKVDAGANRAITQF-------FFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADM--TNVR 230 (304)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECC-------CSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHH--HTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc-------cCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHc--CCCc
Confidence 2 12222222 2234555665422 223 4467889999876 589999995 69999999998765 5888
Q ss_pred EhhHhhchhhhcCC-c----hhHHHHHHHHHHHHHh
Q 021527 278 VGSAMVKLLGEAQS-P----EEGLKELEKFAKSLKS 308 (311)
Q Consensus 278 VGSaiv~~~~~~~~-~----~~~~~~~~~~~~~l~~ 308 (311)
|=..+.+.++...+ + +.+++-..+++++|++
T Consensus 231 iP~~l~~~l~~~~dd~~~~~~~Gi~~a~e~~~~L~~ 266 (304)
T 3fst_A 231 IPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSR 266 (304)
T ss_dssp CCHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999876443 2 3456777777888765
No 216
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=97.44 E-value=0.0063 Score=57.90 Aligned_cols=153 Identities=18% Similarity=0.245 Sum_probs=98.3
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCc
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYN 149 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n 149 (311)
....-|.+.+++.++.|.++|+|++-+++|..+ --+.+++|+++.++|++....||
T Consensus 39 nt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~------------------------~a~al~~I~~~~~vPlvaDiHf~ 94 (366)
T 3noy_A 39 STKTHDVEATLNQIKRLYEAGCEIVRVAVPHKE------------------------DVEALEEIVKKSPMPVIADIHFA 94 (366)
T ss_dssp CSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHH------------------------HHHHHHHHHHHCSSCEEEECCSC
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChH------------------------HHHHHHHHHhcCCCCEEEeCCCC
Confidence 333456789999999999999999999988511 12477888888999999988777
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--CCC-hhhHHHHHHHHHHcCCCeEEEeC-------------CCChHHHHHHHHH
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--DVP-LEETESLQKEAMKNKIELVLFTT-------------PTTPTDRMKAIVE 213 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--Dlp-~ee~~~~~~~~~~~gi~~I~lis-------------p~t~~eri~~i~~ 213 (311)
-+.+..+.++|+|.+=+. .+. .+...++.+.++++|+.....++ +.+++...+...+
T Consensus 95 -------~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~ 167 (366)
T 3noy_A 95 -------PSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALR 167 (366)
T ss_dssp -------HHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHH
Confidence 245556899999997763 111 23457799999999987666432 2345443333222
Q ss_pred h-----CCce-EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCC
Q 021527 214 A-----SEGF-VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGI 259 (311)
Q Consensus 214 ~-----a~gf-iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGI 259 (311)
. ..|| -+++|... +......+-.+.+.+.++-|+-.|.+=
T Consensus 168 ~~~~~e~~gf~~iviS~K~------S~v~~~i~ayr~la~~~dyPLHlGvTE 213 (366)
T 3noy_A 168 WSEKFEKWGFTNYKVSIKG------SDVLQNVRANLIFAERTDVPLHIGITE 213 (366)
T ss_dssp HHHHHHHTTCCCEEEEEEC------SSHHHHHHHHHHHHHHCCCCEEECCSS
T ss_pred HHHHHHhCCCCeEEEeeec------CChHHHHHHHHHHHhccCCCEEEccCC
Confidence 2 3466 34455431 111112223344555578999766544
No 217
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=97.41 E-value=0.0022 Score=64.78 Aligned_cols=174 Identities=12% Similarity=0.093 Sum_probs=101.7
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..++.++.+.+.|||+|-+| |-..++ |. .+++-+.+..|++..++|+.+.+|-
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v-~~----------------~ee~~rvv~~i~~~~~vpisIDT~~------ 393 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVN-FGIESQ-ID----------------VRYVEKIVQTLPYVSNVPLSLDIQN------ 393 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEE-CSSGGG-SC----------------HHHHHHHHHHHHHHTCSCEEEECCC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC-CCCCCC-CH----------------HHHHHHHHHHHHhhCCceEEEeCCC------
Confidence 45788899999999999999999 443332 21 1233345556666679999999872
Q ss_pred CHHHHHHHHHHc--CCcEEEecCCChhhH--HHHHHHHHHcCCCeEEEe----CCCChHHHHHHHHH-----hCCce---
Q 021527 155 GVDNFMSTVRDI--GIRGLVVPDVPLEET--ESLQKEAMKNKIELVLFT----TPTTPTDRMKAIVE-----ASEGF--- 218 (311)
Q Consensus 155 g~~~fi~~~~~a--GadGviipDlp~ee~--~~~~~~~~~~gi~~I~li----sp~t~~eri~~i~~-----~a~gf--- 218 (311)
.+-++.+.++ |++- +.|+..++. .++.+.++++|...|.+- .|.|-+++++...+ ...|+
T Consensus 394 --~~v~eaal~~~~G~~i--INdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~ 469 (566)
T 1q7z_A 394 --VDLTERALRAYPGRSL--FNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDR 469 (566)
T ss_dssp --HHHHHHHHHHCSSCCE--EEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred --HHHHHHHHHhcCCCCE--EEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCc
Confidence 2456667777 8873 566444332 567888999998777664 23343333321111 13565
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeC-----CCCHHHH-----HHHHHcCCcEEEE
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFG-----ISKPEHV-----QQVAGWGADGVIV 278 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfG-----Ist~e~v-----~~v~~~GADGvIV 278 (311)
|++-.....-|... .+-.+.+.++++|+. +.|+++|-+ ....+-+ ......|+|.++|
T Consensus 470 IilDPg~~~igfgk-~~~~~l~~~~~~~~~-g~p~l~G~Snksf~~~~~~~l~~t~a~~a~~~G~~i~rv 537 (566)
T 1q7z_A 470 VIFDPGVLPLGAEG-KPVEVLKTIEFISSK-GFNTTVGLSNLSFGLPDRSYYNTAFLVLGISKGLSSAIM 537 (566)
T ss_dssp EEEECCCCCTTTTC-CHHHHHHHHHHHHHT-TCEECCBGGGGSTTSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEeCCCCcccCcH-HHHHHHHHHHHHHhC-CCCEEEEeCcccccCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 67655441113222 222334445555554 889987542 2111211 2234678898877
No 218
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.41 E-value=0.0034 Score=60.22 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCC
Q 021527 182 ESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISK 261 (311)
Q Consensus 182 ~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst 261 (311)
.++.+.+++.|+..+..+.+....++.+.+.+....++. +......... ..+....+.+.++++.+++||++ .||.+
T Consensus 145 ~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~-i~~~~~~~~~-~~~~~~~~~i~~l~~~~~~pvi~-ggi~t 221 (393)
T 2qr6_A 145 SERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLV-IQGTLISAEH-VNTGGEALNLKEFIGSLDVPVIA-GGVND 221 (393)
T ss_dssp HHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEE-EECSSCCSSC-CCC-----CHHHHHHHCSSCEEE-ECCCS
T ss_pred HHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEE-EeCCcccccc-CCCcccHHHHHHHHHhcCCCEEE-CCcCC
Confidence 334555666787766666666555555555443333332 2211110100 00110123377788888999988 57788
Q ss_pred HHHHHHHHHcCCcEEEEhh
Q 021527 262 PEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 262 ~e~v~~v~~~GADGvIVGS 280 (311)
+++++.+.+.|||+|+||+
T Consensus 222 ~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHHHHHTTTCSEEEESC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 9999999999999999986
No 219
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=97.38 E-value=0.0039 Score=56.88 Aligned_cols=177 Identities=14% Similarity=0.123 Sum_probs=102.4
Q ss_pred EeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC
Q 021527 69 ITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY 148 (311)
Q Consensus 69 i~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~ 148 (311)
+-+..|+.++..++++.+.. .++++++|.++= . .. ..+.++++++. +.+|++..-+
T Consensus 32 vALD~~~~~~al~l~~~l~~-~v~~~KvG~~l~---------~-------~~------G~~~v~~Lk~~-g~~VflDlK~ 87 (255)
T 3ldv_A 32 VALDYDNLADALAFVDKIDP-STCRLKVGKEMF---------T-------LF------GPDFVRELHKR-GFSVFLDLKF 87 (255)
T ss_dssp EEECCSSHHHHHHHHTTSCG-GGCEEEEEHHHH---------H-------HH------HHHHHHHHHHT-TCCEEEEEEE
T ss_pred EEcCCCCHHHHHHHHHHhCC-cCcEEEeCHHHH---------H-------hh------CHHHHHHHHhc-CCCEEEEEec
Confidence 45578999999999998854 489999996661 1 11 24567777764 7888887755
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHcCC---Ce--EEEeCCCChHH------------HHHH
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAMKNKI---EL--VLFTTPTTPTD------------RMKA 210 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~~~gi---~~--I~lisp~t~~e------------ri~~ 210 (311)
.++-.+ ....++.+.+.|+|.+.+.-.. .+-...+.+.++++|- .. |...+..+.++ ...+
T Consensus 88 ~DIpnT-v~~a~~~~~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~ 166 (255)
T 3ldv_A 88 HDIPNT-CSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLR 166 (255)
T ss_dssp CSCHHH-HHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHH
T ss_pred ccchhH-HHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHH
Confidence 444322 2446677889999999986433 2334445555555431 12 22223222211 1122
Q ss_pred HHHhC--CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC-CcEEEeeCCCCH--H--------HHHHHHHcCCcEEE
Q 021527 211 IVEAS--EGFVYLVSSIGVTGARASISGHVQTLLREIKESST-KPVAVGFGISKP--E--------HVQQVAGWGADGVI 277 (311)
Q Consensus 211 i~~~a--~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~-~Pv~vGfGIst~--e--------~v~~v~~~GADGvI 277 (311)
+++.+ .|..=+| .++ ..++.+|+.++ -.++|--||+-. + +..++.++|||.+|
T Consensus 167 ~A~~a~~aG~~GvV-----------~sa---~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iV 232 (255)
T 3ldv_A 167 LATLTKNAGLDGVV-----------CSA---QEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLV 232 (255)
T ss_dssp HHHHHHHTTCSEEE-----------CCH---HHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEE-----------ECH---HHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcCCCEEE
Confidence 22221 1211111 111 24777777653 345564555311 1 25567789999999
Q ss_pred EhhHhhc
Q 021527 278 VGSAMVK 284 (311)
Q Consensus 278 VGSaiv~ 284 (311)
||++|.+
T Consensus 233 vGr~I~~ 239 (255)
T 3ldv_A 233 IGRPITQ 239 (255)
T ss_dssp ECHHHHT
T ss_pred ECHHHhC
Confidence 9999998
No 220
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.36 E-value=0.00037 Score=62.18 Aligned_cols=45 Identities=18% Similarity=0.309 Sum_probs=41.3
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.+++++ .+++|+++++||++++++.++++.|||+|++|+++..
T Consensus 63 ~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 63 LPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 46788888 7789999999999999999999999999999999865
No 221
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=97.34 E-value=0.01 Score=54.07 Aligned_cols=192 Identities=11% Similarity=0.158 Sum_probs=112.7
Q ss_pred HHHHHHcCCccEEEEEeC-CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHH
Q 021527 54 FTRLKKQGKVALIPYITA-GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK 132 (311)
Q Consensus 54 f~~~~~~~~~~li~yi~~-G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~ 132 (311)
|++.-++|+..+-.++.. ..| +.++.+..+|+|+|-|+...+= .+- ++..+.+.
T Consensus 6 ~k~~l~~g~~~~g~~~~~~~~p------~~~e~a~~~g~D~vilDlEhav--~~~-----------------~k~~~~l~ 60 (261)
T 3qz6_A 6 LKKKLSAGKSVVGTMLNLVYNP------DIVRIYAEAGLDYFIVDCEHAA--YTF-----------------REINHLVS 60 (261)
T ss_dssp HHHHHHTTCCEEEEEESSCCCT------THHHHHHHTTCSEEEEESSSSC--CCH-----------------HHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCCCH------HHHHHHhcCCcCEEEEeccCCC--CCH-----------------HHHHHHHH
Confidence 333344677777778877 778 5677778899999999855432 222 12222333
Q ss_pred HhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCC-hhhHHHHHHHHH----------------------
Q 021527 133 EVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP-LEETESLQKEAM---------------------- 189 (311)
Q Consensus 133 ~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp-~ee~~~~~~~~~---------------------- 189 (311)
.+.. ...++++-. |.. .. ..++.+.+.|++||++|-.- .|+..++.+.++
T Consensus 61 a~~~-~~~~~~VRV--n~~---~~-~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~ 133 (261)
T 3qz6_A 61 VAKN-AGVSVLVRI--PQV---DR-AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNW 133 (261)
T ss_dssp HHHH-HTCEEEEEC--SSC---CH-HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCH
T ss_pred HHhh-cCCeEEEEe--CCC---CH-HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccch
Confidence 3322 234555544 322 12 46888889999999999763 356666666652
Q ss_pred -------HcCCCeEEEeCCCChH--HHHHHHHHh-CCceEEEE-----ecCCccCCCCCCCchHHHHHHHHhhc---CCC
Q 021527 190 -------KNKIELVLFTTPTTPT--DRMKAIVEA-SEGFVYLV-----SSIGVTGARASISGHVQTLLREIKES---STK 251 (311)
Q Consensus 190 -------~~gi~~I~lisp~t~~--eri~~i~~~-a~gfiY~v-----s~~G~TG~~~~~~~~~~~~l~~vk~~---~~~ 251 (311)
...+.++.++ .|+. +.+.+|++. .-.++++. ...|..+. ...+.+...++++-.. .++
T Consensus 134 ~~y~~~~~~~~~v~~mI--Et~~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~--~~~p~v~~a~~~iv~aa~aaG~ 209 (261)
T 3qz6_A 134 AEWVQERNDEIFIMAQI--EHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQ--TEHPKVYECYEKVYRAADRQGV 209 (261)
T ss_dssp HHHHHHHHTTCEEEEEE--CCHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTC--TTCHHHHHHHHHHHHHHHHHTC
T ss_pred hhHHhcCCCCeEEEEEE--CCHHHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHhCC
Confidence 1123444444 4443 556777642 12344442 12343332 2234555556655332 367
Q ss_pred cEEEeeCCCCHHHH-HHHHHcCCcEEEEhhHhh
Q 021527 252 PVAVGFGISKPEHV-QQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 252 Pv~vGfGIst~e~v-~~v~~~GADGvIVGSaiv 283 (311)
|+.+- ..+++.+ ..+.+.|.+-+.+|+-..
T Consensus 210 ~~g~~--~~~~~~~~~~~~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 210 VKGFF--TAADAAKMGWAVERGAQMLLWSGDVA 240 (261)
T ss_dssp EEEEE--ESSCGGGGHHHHHTTCCEEEEEEHHH
T ss_pred CEEEE--eCCHHHHHHHHHHCCCCEEEEhhHHH
Confidence 75332 3468999 899999999999997543
No 222
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=97.33 E-value=0.1 Score=48.36 Aligned_cols=205 Identities=17% Similarity=0.244 Sum_probs=130.4
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+.+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=-- .| +.+.-...+.+..
T Consensus 9 ~~~ll~~A~~~~-yAV~AfN---v~n~e~~~avi~AAee~~sPvIlq~s-------~~---------~~~~~~g~~~~~~ 68 (288)
T 3q94_A 9 MKEMLNKALEGK-YAVGQFN---MNNLEWTQAILAAAEEEKSPVILGVS-------EG---------AARHMTGFKTVVA 68 (288)
T ss_dssp SHHHHHHHHHHT-CCEEEEE---CCSHHHHHHHHHHHHHTTCCEEEEEE-------HH---------HHHHTSCHHHHHH
T ss_pred HHHHHHHHHHCC-cEEEEEe---eCCHHHHHHHHHHHHHhCCCEEEECC-------hh---------hhhhcCCHHHHHH
Confidence 367777766654 3454454 34678999999999999998764321 11 1111011223445
Q ss_pred HHHHhhc--cCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhh----HHHHHHHHHHcCCCeEE---E
Q 021527 130 MLKEVVP--QMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEE----TESLQKEAMKNKIELVL---F 198 (311)
Q Consensus 130 ~i~~ir~--~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee----~~~~~~~~~~~gi~~I~---l 198 (311)
+++.+.+ +.++||.|-. -+..-.+.+..+.++|.+.+.+ ..+|+|| ..++.+.++++|+.+=- .
T Consensus 69 ~v~~~A~~~~~~VPValHl-----DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~ 143 (288)
T 3q94_A 69 MVKALIEEMNITVPVAIHL-----DHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGT 143 (288)
T ss_dssp HHHHHHHHTTCCSCEEEEE-----EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESB
T ss_pred HHHHHHHhcCCCCcEEEEC-----CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 6777767 7899999863 1222246788999999999988 4688887 66788889988873210 0
Q ss_pred eC-----------CCChHHHHHHHHHhCCceEEE-E---ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE--eeCCCC
Q 021527 199 TT-----------PTTPTDRMKAIVEASEGFVYL-V---SSIGVTGARASISGHVQTLLREIKESSTKPVAV--GFGISK 261 (311)
Q Consensus 199 is-----------p~t~~eri~~i~~~a~gfiY~-v---s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v--GfGIst 261 (311)
+. .-|.++..++..+.. |...+ + +..|.+-....++ .+.|+++++.+++|++. |.|+.
T Consensus 144 vgG~Ed~~~~~~~~yT~Peea~~Fv~~T-gvD~LAvaiGt~HG~Y~~~p~Ld---~~~L~~I~~~v~vpLVlHGgSG~~- 218 (288)
T 3q94_A 144 VGGQEDDVIAEGVIYADPAECKHLVEAT-GIDCLAPALGSVHGPYKGEPNLG---FAEMEQVRDFTGVPLVLHGGTGIP- 218 (288)
T ss_dssp CBCSCSSCGGGGCBCCCHHHHHHHHHHH-CCSEEEECSSCBSSCCSSSCCCC---HHHHHHHHHHHCSCEEECCCTTCC-
T ss_pred eccccCCcCCccccCCCHHHHHHHHHHH-CCCEEEEEcCcccCCcCCCCccC---HHHHHHHHHhcCCCEEEeCCCCCC-
Confidence 10 124345555555432 33333 2 3444332112232 36788898888999876 66775
Q ss_pred HHHHHHHHHcCCcEEEEhhHhhc
Q 021527 262 PEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 262 ~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.|++++..+.|.-=+=|+|.+-.
T Consensus 219 ~e~i~~ai~~Gv~KiNi~Tdl~~ 241 (288)
T 3q94_A 219 TADIEKAISLGTSKINVNTENQI 241 (288)
T ss_dssp HHHHHHHHHTTEEEEEECHHHHH
T ss_pred HHHHHHHHHcCCeEEEEChHHHH
Confidence 79999999999888889988754
No 223
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.31 E-value=0.0022 Score=60.97 Aligned_cols=130 Identities=17% Similarity=0.221 Sum_probs=77.9
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCCh--HHHHHHHHHhC
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP--TDRMKAIVEAS 215 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~--~eri~~i~~~a 215 (311)
++.||+.- |....+..++...+.++|.=|++-...++|+....... ....+..+........ .++++.+.+..
T Consensus 56 l~~PIi~A----pM~~~~~~~lA~Ava~~Gglg~i~~~~s~e~~~~~i~~-~p~~l~~v~~~~g~~~~~~~~~~~l~~~~ 130 (351)
T 2c6q_A 56 SGVPIIAA----NMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQ-NPDCLEHLAASSGTGSSDFEQLEQILEAI 130 (351)
T ss_dssp EECCEEEC----SSTTTSCHHHHHHHHHTTCEEECCTTCCHHHHHHHHHH-CGGGCTTEEEEECSSHHHHHHHHHHHHHC
T ss_pred ccCCEEEC----CCCCCCcHHHHHHHHHCCCEEEEcCCCCHHHHHHHHhh-CchhhheeEeecCCChHHHHHHHHHHhcc
Confidence 45776663 22222335677788999988888777777765443221 1123322222112222 24555554432
Q ss_pred CceEEE-EecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 216 EGFVYL-VSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 216 ~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.|...+ +... .| .+....+.++++|+.+ ++||++|+. .|+++++++.++|||+++||
T Consensus 131 ~g~~~i~i~~~--~g----~~~~~~~~i~~lr~~~~~~~vi~g~v-~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 131 PQVKYICLDVA--NG----YSEHFVEFVKDVRKRFPQHTIMAGNV-VTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TTCCEEEEECS--CT----TBHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEec--CC----CcHHHHHHHHHHHHhcCCCeEEEEeC-CCHHHHHHHHHhCCCEEEEC
Confidence 233222 2211 12 2345678899999988 899988854 56999999999999999996
No 224
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=97.30 E-value=0.11 Score=48.15 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=132.2
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+.+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=--| |- ++ . . ..+.+..
T Consensus 6 ~~~ll~~A~~~~-yAv~AfN---v~n~e~~~avl~AAe~~~sPvIlq~s~-------~~-~~----y---~--g~~~~~~ 64 (286)
T 1gvf_A 6 TKYLLQDAQANG-YAVPAFN---IHNAETIQAILEVCSEMRSPVILAGTP-------GT-FK----H---I--ALEEIYA 64 (286)
T ss_dssp SHHHHHHHHHHT-CCEEEEE---CCSHHHHHHHHHHHHHHTCCCEEEECT-------TH-HH----H---S--CHHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEe---eCCHHHHHHHHHHHHHhCCCEEEECCh-------hH-Hh----h---c--CHHHHHH
Confidence 356677666554 4554454 456788888899999988887543211 21 10 0 1 2455667
Q ss_pred HHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhh----HHHHHHHHHHcCCCeEE------
Q 021527 130 MLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEE----TESLQKEAMKNKIELVL------ 197 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee----~~~~~~~~~~~gi~~I~------ 197 (311)
+++...++.++||.+-. -+..-.+.+..+.++|.+.+.+ ..+|+|| ..++.+.++++|+.+=-
T Consensus 65 ~v~~~a~~~~VPValHl-----DHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vg 139 (286)
T 1gvf_A 65 LCSAYSTTYNMPLALHL-----DHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG 139 (286)
T ss_dssp HHHHHHHHTTSCBEEEE-----EEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred HHHHHHHhCCCcEEEEc-----CCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 78887778899998863 1222246888999999999988 4688887 67788899888863211
Q ss_pred ----Ee--C----CCChHHHHHHHHHhCCceEEE-E---ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE--eeCCCC
Q 021527 198 ----FT--T----PTTPTDRMKAIVEASEGFVYL-V---SSIGVTGARASISGHVQTLLREIKESSTKPVAV--GFGISK 261 (311)
Q Consensus 198 ----li--s----p~t~~eri~~i~~~a~gfiY~-v---s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v--GfGIst 261 (311)
-+ . --|.++..++..+. .|.+.+ + +..|.+-....++ .+.|+++++.+++|++. |.|+.
T Consensus 140 g~ed~~~~~~~~~~~T~Peea~~Fv~~-TgvD~LAvaiGt~HG~Y~~~p~Ld---~~~L~~I~~~~~vpLVlHGgSG~~- 214 (286)
T 1gvf_A 140 GVEDDMSVDAESAFLTDPQEAKRFVEL-TGVDSLAVAIGTAHGLYSKTPKID---FQRLAEIREVVDVPLVLHGASDVP- 214 (286)
T ss_dssp -----------CCSSCCHHHHHHHHHH-HCCSEEEECSSCCSSCCSSCCCCC---HHHHHHHHHHCCSCEEECCCTTCC-
T ss_pred CcccCcccccccccCCCHHHHHHHHHH-HCCCEEEeecCccccCcCCCCccC---HHHHHHHHHhcCCCEEEECCCCCC-
Confidence 01 0 11444555555543 333344 2 3444332222233 36788999989999876 66775
Q ss_pred HHHHHHHHHcCCcEEEEhhHhhc
Q 021527 262 PEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 262 ~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.|++++..+.|.-=+=|+|.+-.
T Consensus 215 ~e~i~~ai~~Gv~KiNi~Tdl~~ 237 (286)
T 1gvf_A 215 DEFVRRTIELGVTKVNVATELKI 237 (286)
T ss_dssp HHHHHHHHHTTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCeEEEEChHHHH
Confidence 79999999999888889988744
No 225
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.00051 Score=62.72 Aligned_cols=71 Identities=18% Similarity=0.048 Sum_probs=54.5
Q ss_pred ChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHh
Q 021527 203 TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 203 t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSai 282 (311)
.|.+..+.+.+..-..++++...+ ...+.++++.+.+++|+.+|+||++. ++++++ .|||-|++||+.
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~----------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a 106 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGP----------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWL 106 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESS----------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGG
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCC----------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHH
Confidence 455555666555444567766554 11367888888889999999999985 999999 999999999999
Q ss_pred hch
Q 021527 283 VKL 285 (311)
Q Consensus 283 v~~ 285 (311)
++-
T Consensus 107 ~~~ 109 (260)
T 2agk_A 107 FTK 109 (260)
T ss_dssp BCT
T ss_pred Hhh
Confidence 873
No 226
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=97.29 E-value=0.0094 Score=55.76 Aligned_cols=177 Identities=12% Similarity=0.111 Sum_probs=106.6
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||++-+-.|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtT----GE~~------------~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 103 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGST----GEGA------------YLSDPEWDEVVDFTLKTVAHRVPTIVSVSDL 103 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGG----GTGG------------GSCHHHHHHHHHHHHHHHTTSSCBEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 45667899999999999999999874111 0111 13555556666666543 368998876544
Q ss_pred chhccCHHHHHHHHHHcCCcEEEecC-----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVPD-----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviipD-----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++.- ...++..+ |...++..++.++++=.| +.+.+-+.+++..-..+
T Consensus 104 ~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnI 181 (315)
T 3na8_A 104 TTA--KTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNV 181 (315)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTE
T ss_pred CHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCE
Confidence 332 124567788999999998831 12245544 556667778877765433 23356666663333455
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ ..+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 182 vgiKd---ssg-------d~-~~~~~~~~~~~~~f~v~~G~D----~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 182 TMVKE---STG-------DI-QRMHKLRLLGEGRVPFYNGCN----PLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp EEEEE---CSS-------CH-HHHHHHHHHTTTCSCEEECCG----GGHHHHHHHTCSEEEESGG
T ss_pred EEEEC---CCC-------CH-HHHHHHHHHcCCCEEEEeCch----HHHHHHHHCCCCEEEechh
Confidence 54411 112 11 2344444433 456666654 3455666789999999876
No 227
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=97.29 E-value=0.06 Score=49.54 Aligned_cols=206 Identities=15% Similarity=0.183 Sum_probs=120.0
Q ss_pred HHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHHHH
Q 021527 53 TFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNAIL 128 (311)
Q Consensus 53 ~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~~~ 128 (311)
.|.++++++++. ..+++=|. -.++.++++|+|+|-+| |+- ....+. ..+++++.+
T Consensus 20 ~lr~~~~~g~~i--~m~tayDa------~sA~l~e~aG~d~ilvG--------dSl-----~~~~lG~~dt~~vtldem~ 78 (275)
T 3vav_A 20 KLQAMREAGEKI--AMLTCYDA------SFAALLDRANVDVQLIG--------DSL-----GNVLQGQTTTLPVTLDDIA 78 (275)
T ss_dssp HHHHHHHHTCCE--EEEECCSH------HHHHHHHHTTCSEEEEC--------TTH-----HHHTTCCSSSTTCCHHHHH
T ss_pred HHHHHHHCCCcE--EEEeCcCH------HHHHHHHHcCCCEEEEC--------cHH-----HHHHcCCCCCCccCHHHHH
Confidence 455666676653 44555444 56777899999999776 221 011111 126899999
Q ss_pred HHHHHhhccC-CCcEEEEecCcchhccCHHH---HHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe--CC-
Q 021527 129 SMLKEVVPQM-SCPIALFTYYNPILKRGVDN---FMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT--TP- 201 (311)
Q Consensus 129 ~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~---fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li--sp- 201 (311)
..++.|++-. +.||+...-+.. | .+.++ -+.++.++|++||-+=|- .+..+..+.+.+.||++.--+ +|
T Consensus 79 ~h~~aV~r~~~~~~vvaD~pfgs-Y-~s~~~a~~~a~rl~kaGa~aVklEdg--~~~~~~i~~l~~~GIpv~gHlgltPq 154 (275)
T 3vav_A 79 YHTACVARAQPRALIVADLPFGT-Y-GTPADAFASAVKLMRAGAQMVKFEGG--EWLAETVRFLVERAVPVCAHVGLTPQ 154 (275)
T ss_dssp HHHHHHHHTCCSSEEEEECCTTS-C-SSHHHHHHHHHHHHHTTCSEEEEECC--GGGHHHHHHHHHTTCCEEEEEESCGG
T ss_pred HHHHHHHhcCCCCCEEEecCCCC-C-CCHHHHHHHHHHHHHcCCCEEEECCc--hhHHHHHHHHHHCCCCEEEecCCCce
Confidence 9999998776 478887631100 1 12333 344566679999988775 245566777788899865221 22
Q ss_pred ------------CChH------HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHH
Q 021527 202 ------------TTPT------DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPE 263 (311)
Q Consensus 202 ------------~t~~------eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e 263 (311)
.+.+ +|.+.+.+..-..+++. + ++. +..+++.+.+++|+ +|.|=..
T Consensus 155 ~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE---~-------vp~---~~a~~It~~l~iP~-igIGaG~-- 218 (275)
T 3vav_A 155 SVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLE---A-------VPT---LVAAEVTRELSIPT-IGIGAGA-- 218 (275)
T ss_dssp GHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEE---S-------CCH---HHHHHHHHHCSSCE-EEESSCS--
T ss_pred EEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEec---C-------CCH---HHHHHHHHhCCCCE-EEEccCC--
Confidence 2221 23333333233334443 1 222 36778888889998 5666542
Q ss_pred HHHHHHHcCCcEEEEhh-H-----------hhchhhhcCCchhHHHHHHHHHHHHHhh
Q 021527 264 HVQQVAGWGADGVIVGS-A-----------MVKLLGEAQSPEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 264 ~v~~v~~~GADGvIVGS-a-----------iv~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (311)
++||=|.=. - |+|...+ ..+...+.+++|+++.|..
T Consensus 219 --------~cdgQvLv~~D~lG~~~~~~pkf~k~y~~--~~~~~~~a~~~y~~~V~~~ 266 (275)
T 3vav_A 219 --------ECSGQVLVLHDMLGVFPGKRPRFVKDFMQ--GQPSIFAAVEAYVRAVKDG 266 (275)
T ss_dssp --------CSSEEEECHHHHTTCSCSCCCTTCCCCCT--TCSSHHHHHHHHHHHHHHT
T ss_pred --------CCCceeeeHhhhcCCCCCCCCCcchhhhh--hHHHHHHHHHHHHHHHhcC
Confidence 367665422 1 3333322 1234578899999998864
No 228
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.29 E-value=0.00098 Score=63.83 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=78.3
Q ss_pred cCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe-CCCChHHHHHHHHHhC
Q 021527 137 QMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT-TPTTPTDRMKAIVEAS 215 (311)
Q Consensus 137 ~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li-sp~t~~eri~~i~~~a 215 (311)
.++.||+.-. ...-+-.++...+.+.|.-|+|=...++|+.. +.+++..--....+ .+....++++.+.+.
T Consensus 40 ~l~~Pii~Ap----M~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~---~~i~~~~~~~~~~~g~~~~~~e~~~~a~~a- 111 (361)
T 3r2g_A 40 TLNLPVISAN----MDTITESNMANFMHSKGAMGALHRFMTIEENI---QEFKKCKGPVFVSVGCTENELQRAEALRDA- 111 (361)
T ss_dssp EESSCEEECC----STTTCSHHHHHHHHHTTCEEBCCSCSCHHHHH---HHHHTCCSCCBEEECSSHHHHHHHHHHHHT-
T ss_pred EcCCCEEECC----CCCchHHHHHHHHHHcCCCEEEeCCCCHHHHH---HHHhhcceEEEEEcCCCHHHHHHHHHHHHc-
Confidence 3678977743 22234467888899999888766566666543 34444331111112 222223556555443
Q ss_pred CceEEE-EecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 216 EGFVYL-VSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 216 ~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
|+.++ +... .| .+..+.+.++++|+.. ++||++| +|.|+++++.+.++|||+++||
T Consensus 112 -GvdvI~id~a--~G----~~~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 112 -GADFFCVDVA--HA----HAKYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp -TCCEEEEECS--CC----SSHHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred -CCCEEEEeCC--CC----CcHhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHHHcCCCEEEEc
Confidence 44333 2211 12 2344567899999875 7899775 5889999999999999999995
No 229
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=97.28 E-value=0.016 Score=53.51 Aligned_cols=175 Identities=18% Similarity=0.177 Sum_probs=106.0
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCcc
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYNP 150 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n~ 150 (311)
.-|++.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++.+.+. -++||+.-+-.|.
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttG----E~~------------~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~ 82 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTA----ESP------------TLTTDEKELILKTVIDLVDKRVPVIAGTGTND 82 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGG----TGG------------GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc----ccc------------cCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 34567899999999999999998851110 111 13455555666665543 4689988765543
Q ss_pred hhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCceE
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gfi 219 (311)
... .-+..+.+.++|+||+++. - ...++..+ |+..+...++.++++=.| ..+.+-+.++++ -..++
T Consensus 83 t~~--ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pniv 159 (292)
T 3daq_A 83 TEK--SIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIV 159 (292)
T ss_dssp HHH--HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT-STTEE
T ss_pred HHH--HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc-CCCEE
Confidence 321 2456778899999999883 1 12244444 455566678887766433 334566666665 34555
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCC---CcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESST---KPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~---~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.+=. .+| ++ +.+.++++.++ .-|+.|.. +.+-..+..|+||+|-|++
T Consensus 160 giK~---ssg-------d~-~~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 160 ALKD---ATN-------DF-EYLEEVKKRIDTNSFALYSGND----DNVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp EEEE---CCC-------CH-HHHHHHHTTSCTTTSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEe---CCC-------CH-HHHHHHHHHCCCCCEEEEECCH----HHHHHHHhcCCCEEEeCHH
Confidence 4411 112 12 44666665543 44555443 4466667799999998875
No 230
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=97.26 E-value=0.0061 Score=57.20 Aligned_cols=105 Identities=13% Similarity=0.208 Sum_probs=71.3
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.+..++.++.+.+.|||+|-+|...+.|-++..-.+. .++.+...|+.++++.++||-+.+|-
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~e----------E~~Rv~pvI~~l~~~~~vpiSIDT~~------ 94 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEE----------EIQRVVPVIKAIRKESDVLISIDTWK------ 94 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHH----------HHHHHHHHHHHHHHHCCCEEEEECSC------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHH----------HHHHHHHHHHHHHhhCCceEEEeCCC------
Confidence 45778899999999999999999988888554322121 12345678888888789999999873
Q ss_pred CHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEEEe
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVLFT 199 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~li 199 (311)
.+-++.+.++|++- |.|+.-+. ..++.+.++++|...|.+-
T Consensus 95 --~~Va~aAl~aGa~i--INDVsg~~~d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 95 --SQVAEAALAAGADL--VNDITGLMGDEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp --HHHHHHHHHTTCCE--EEETTTTCSCTTHHHHHHHHTCEEEEEC
T ss_pred --HHHHHHHHHcCCCE--EEECCCCCCChHHHHHHHHcCCCEEEEe
Confidence 34567788889874 45554321 1346667889998877764
No 231
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=97.25 E-value=0.0096 Score=54.97 Aligned_cols=179 Identities=12% Similarity=0.088 Sum_probs=108.4
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEec
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTY 147 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y 147 (311)
--|.-|.+.+.+.++.+.++|+|.|-+. |-+ ....-.+.++-.++++.+.+. -++||+.-+-
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~---------Gtt-------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg 77 (292)
T 2vc6_A 14 ADDRIDEVALHDLVEWQIEEGSFGLVPC---------GTT-------GESPTLSKSEHEQVVEITIKTANGRVPVIAGAG 77 (292)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCSEEETT---------SGG-------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC---------ccc-------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 4477888999999999999999999874 210 000114555555666665543 3689888765
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCC
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASE 216 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~ 216 (311)
.|... ..-+..+.+.++|+||+++. - ...++..+ |...++..++..+++=.| +.+.+-+.++++.-.
T Consensus 78 ~~~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~p 155 (292)
T 2vc6_A 78 SNSTA--EAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCP 155 (292)
T ss_dssp CSSHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCT
T ss_pred CccHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCC
Confidence 54332 12356777899999999883 1 12245444 455666778877665332 334566666665234
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.++.+=. .+|. + ..+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 156 nIvgiK~---s~gd-------~-~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 207 (292)
T 2vc6_A 156 NVKGVXD---ATGN-------L-LRPSLERMACGEDFNLLTGED----GTALGYMAHGGHGCISVTA 207 (292)
T ss_dssp TEEEEEE---CSCC-------T-HHHHHHHHHSCTTSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred CEEEEec---CCCC-------H-HHHHHHHHHcCCCEEEEECch----HHHHHHHHcCCCEEEecHH
Confidence 5544311 1121 1 2344444433 466766643 4556667799999999876
No 232
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.24 E-value=0.0011 Score=65.42 Aligned_cols=134 Identities=17% Similarity=0.204 Sum_probs=84.5
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.+..+.+.|+|.+.+.. +.| .. ...++.++.+++..++|++.-.-. ..+-
T Consensus 230 ~~~a~~l~~~gvd~lvvdt------a~G--------------~~-~~~L~~I~~l~~~~~vpvi~k~v~-------~~~~ 281 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDT------AHA--------------HN-LKAIKSMKEMRQKVDADFIVGNIA-------NPKA 281 (486)
T ss_dssp HHHHHHHHHTTCSEEEEEC------SCC--------------CC-HHHHHHHHHHHHTCCSEEEEEEEC-------CHHH
T ss_pred HHHHHHHHHhcCCceEEEe------cCC--------------cE-eehhhHHHHHHHHhCCccccCCcC-------CHHH
Confidence 4667788889999887751 222 22 245678888888889999764321 1223
Q ss_pred HHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHH
Q 021527 160 MSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQ 239 (311)
Q Consensus 160 i~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~ 239 (311)
.+.+. |+|++.+ ...... + .+ .|. . .|. |.. . ....
T Consensus 282 a~~l~--G~d~v~v-g~g~g~---------------~-----~~--~r~--~-------------~~~-g~~--~-~~~l 317 (486)
T 2cu0_A 282 VDDLT--FADAVKV-GIGPGS---------------I-----CT--TRI--V-------------AGV-GVP--Q-ITAV 317 (486)
T ss_dssp HTTCT--TSSEEEE-CSSCST---------------T-----BC--HHH--H-------------TCC-CCC--H-HHHH
T ss_pred HHHhh--CCCeEEE-eeeecc---------------c-----ee--eeE--E-------------eec-Ccc--h-HHHH
Confidence 33344 9999877 221110 0 01 121 0 111 111 0 1122
Q ss_pred HHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 240 TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 240 ~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
..+.++.+..++||++.+||.+..|+.+.+.+|||+|-+||.|...
T Consensus 318 ~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 318 AMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp HHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcC
Confidence 3455555555899999999999999999999999999999999964
No 233
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=97.24 E-value=0.031 Score=51.61 Aligned_cols=177 Identities=14% Similarity=0.174 Sum_probs=105.7
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+.. ++||+.-+-.|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~------------~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~ 82 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTT----GEGC------------SVGSRERQAILSSFIAAGIAPSRIVTGVLVD 82 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTT----TTGG------------GSCHHHHHHHHHHHHHTTCCGGGEEEEECCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 45667889999999999999999884111 1111 145556666777666543 58988876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C----CChhhHHH-HHHHHHHc---CCCeEEEeCC-----CChHHHHHHHHHh
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D----VPLEETES-LQKEAMKN---KIELVLFTTP-----TTPTDRMKAIVEA 214 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D----lp~ee~~~-~~~~~~~~---gi~~I~lisp-----~t~~eri~~i~~~ 214 (311)
... ..-+..+.+.++|+||+++. - ...++..+ |...+... ++..+++=.| +.+.+-+.++++.
T Consensus 83 ~t~--~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~ 160 (294)
T 3b4u_A 83 SIE--DAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAA 160 (294)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred cHH--HHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHh
Confidence 322 12356777889999999883 2 23344554 44555656 7877765333 2345666667622
Q ss_pred CCc-eEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 215 SEG-FVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 215 a~g-fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
-.. ++.+=. .+| ++ ..+.++++.+ +..|+.|. -+.+-..+..|+||+|-|++
T Consensus 161 ~pn~ivgiKd---s~g-------d~-~~~~~~~~~~~~f~v~~G~----d~~~l~~l~~G~~G~is~~~ 214 (294)
T 3b4u_A 161 FPGIVTGVKD---SSG-------NW-SHTERLLKEHGDLAILIGD----ERDLARGVRLGGQGAISGVA 214 (294)
T ss_dssp CTTTEEEEEE---CCC-------CH-HHHHHHHHHHTTSEEEECC----HHHHHHHHHTTCCEEEESGG
T ss_pred CCCcEEEEEE---CCC-------CH-HHHHHHHHhCCCeEEEEcc----HHHHHHHHHCCCCEEEeCHH
Confidence 344 554311 111 11 2333443322 45565554 24566677799999999876
No 234
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=97.22 E-value=0.011 Score=54.79 Aligned_cols=181 Identities=13% Similarity=0.126 Sum_probs=110.3
Q ss_pred EEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--C-CCcEE
Q 021527 67 PYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--M-SCPIA 143 (311)
Q Consensus 67 ~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~-~iPii 143 (311)
|| --|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. - ++||+
T Consensus 19 Pf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~g~rvpvi 81 (301)
T 3m5v_A 19 PF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTT----GESAT------------LTHEEHRTCIEIAVETCKGTKVKVL 81 (301)
T ss_dssp CE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred Cc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35 5678888999999999999999999884111 11211 3455555666665543 2 68998
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHH
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIV 212 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~ 212 (311)
.-+-.|... ..-+..+.+.++|+|++++. - ...++..+ |...++..++.++++=.| ..+.+-+.+++
T Consensus 82 aGvg~~~t~--~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 82 AGAGSNATH--EAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp EECCCSSHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EeCCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 876554332 12457778899999999883 1 12244444 556667778887765332 33456666776
Q ss_pred HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 213 EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 213 ~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.-..++.+=. .+| ++ +.+.++++.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 160 ~~~pnivgiKd---ssg-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 214 (301)
T 3m5v_A 160 RDCENIYGVKE---ASG-------NI-DKCVDLLAHEPRMMLISGED----AINYPILSNGGKGVISVTS 214 (301)
T ss_dssp HHCTTEEEEEE---CSS-------CH-HHHHHHHHHCTTSEEEECCG----GGHHHHHHTTCCEEEESGG
T ss_pred hcCCCEEEEEe---CCC-------CH-HHHHHHHHhCCCeEEEEccH----HHHHHHHHcCCCEEEehHH
Confidence 65245554421 112 11 2344444433 455655543 3455667789999998865
No 235
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=97.22 E-value=0.022 Score=53.62 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=110.9
Q ss_pred EEEEEeC----CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--C
Q 021527 65 LIPYITA----GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--M 138 (311)
Q Consensus 65 li~yi~~----G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~ 138 (311)
+.+.+|| |.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -
T Consensus 39 ~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~------------Ls~eEr~~vi~~~ve~~~g 102 (332)
T 2r8w_A 39 SAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGST----GIYMY------------LTREERRRAIEAAATILRG 102 (332)
T ss_dssp EECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTT
T ss_pred eEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCC
Confidence 3344555 55677899999999999999999884111 11211 3445555666665543 3
Q ss_pred CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHH
Q 021527 139 SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDR 207 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~er 207 (311)
++||+.-+-.|... ..-+..+.+.++|+||+++. - ...++..+ |...+...++.++++=.| ..+.+-
T Consensus 103 rvpViaGvg~~st~--eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~ 180 (332)
T 2r8w_A 103 RRTLMAGIGALRTD--EAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDEL 180 (332)
T ss_dssp SSEEEEEECCSSHH--HHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHH
T ss_pred CCcEEEecCCCCHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHH
Confidence 68998876554322 12356777889999999883 1 12245444 455667778877665322 234566
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHh
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSai 282 (311)
+.++++ -..++.+=. .+|. +....+.+.++++.++-.+.+-.|- -+.+-..+..|+||+|-|++-
T Consensus 181 ~~~La~-~pnIvgiKd---ssgd----~~~~~~~~~~l~~~~~~~f~v~~G~--D~~~l~~l~~G~~G~is~~an 245 (332)
T 2r8w_A 181 LVRLAY-IPNIRAIKM---PLPA----DADYAGELARLRPKLSDDFAIGYSG--DWGCTDATLAGGDTWYSVVAG 245 (332)
T ss_dssp HHHHHT-STTEEEEEE---CCCT----TCCHHHHHHHHTTTSCTTCEEEECC--HHHHHHHHHTTCSEEEESGGG
T ss_pred HHHHHc-CCCEEEEEe---CCCC----chhHHHHHHHHHHhcCCCEEEEeCc--hHHHHHHHHCCCCEEEeCHHH
Confidence 666654 344443311 1111 1111245666666543223333342 356677778999999999654
No 236
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=97.22 E-value=0.028 Score=52.53 Aligned_cols=203 Identities=12% Similarity=0.210 Sum_probs=128.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEE-EecCcchhcc
Q 021527 76 LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL-FTYYNPILKR 154 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiil-m~Y~n~i~~~ 154 (311)
.+.+.+.++.|...++|.|-+- +. +.| .+-...+++...++ +.+++.+. ++..+ .-+.
T Consensus 28 ~~~l~~~~~~L~~~~pd~vsVT--~~---~~g--------------~~r~~t~~~a~~i~-~~g~~~i~Hltc~~-~~~~ 86 (310)
T 3apt_A 28 EEALFRTLEELKAFRPAFVSIT--YG---AMG--------------STRERSVAWAQRIQ-SLGLNPLAHLTVAG-QSRK 86 (310)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEC--CC---STT--------------CSHHHHHHHHHHHH-HTTCCBCEEEECTT-SCHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEe--cC---CCC--------------CcchhHHHHHHHHH-HhCCCeEEEeecCC-CCHH
Confidence 4567889999998899998872 21 122 22234566778888 56665333 33322 2334
Q ss_pred CHHHHHHHHHHcCCcEEEe--cCCC------------hhhHHHHHHHHHHc-C--CCeEEEeCC----CCh--HHHHHHH
Q 021527 155 GVDNFMSTVRDIGIRGLVV--PDVP------------LEETESLQKEAMKN-K--IELVLFTTP----TTP--TDRMKAI 211 (311)
Q Consensus 155 g~~~fi~~~~~aGadGvii--pDlp------------~ee~~~~~~~~~~~-g--i~~I~lisp----~t~--~eri~~i 211 (311)
.++.++..+.+.|++.+++ .|.| ++.+.++.+.+++. | +..-.-..| ..+ +..+..+
T Consensus 87 ~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~L 166 (310)
T 3apt_A 87 EVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHF 166 (310)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHH
Confidence 5677888899999998877 3533 33577788878776 6 333333444 222 1222222
Q ss_pred H-HhCCceEEEEecCCccCCCCCCC-chHHHHHHHHhhc-CCCcEEEeeC-CCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 212 V-EASEGFVYLVSSIGVTGARASIS-GHVQTLLREIKES-STKPVAVGFG-ISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 212 ~-~~a~gfiY~vs~~G~TG~~~~~~-~~~~~~l~~vk~~-~~~Pv~vGfG-Ist~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
. +...|..|++|-. -.+ ..+.++++++|+. .++||+.|.= |.|..++..+.++ -|+-|-..+.+.++
T Consensus 167 k~Kv~aGAdf~iTQ~-------ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~--~Gv~iP~~l~~~l~ 237 (310)
T 3apt_A 167 KAKVEAGLDFAITQL-------FFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTEV--CGASIPGPLLAKLE 237 (310)
T ss_dssp HHHHHHHCSEEEECC-------CSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHHT--SCCCCCHHHHHHHH
T ss_pred HHHHHcCCCEEEecc-------cCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHHc--CCCCCCHHHHHHHH
Confidence 1 2234445665422 123 4577889999875 5799999986 8889999999775 68888889998887
Q ss_pred hcCC-c----hhHHHHHHHHHHHHHh
Q 021527 288 EAQS-P----EEGLKELEKFAKSLKS 308 (311)
Q Consensus 288 ~~~~-~----~~~~~~~~~~~~~l~~ 308 (311)
...+ + ..+++...+++++|++
T Consensus 238 ~~~~d~~~~~~~gi~~a~e~~~~L~~ 263 (310)
T 3apt_A 238 RHQDDPKAVLEIGVEHAVRQVAELLE 263 (310)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5433 2 3456666677777763
No 237
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=97.21 E-value=0.0075 Score=55.45 Aligned_cols=169 Identities=15% Similarity=0.262 Sum_probs=101.9
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhc
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILK 153 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~ 153 (311)
-+.+..++.++.+.+.|||+|.+|-..+-|-++-...+.= ++-+...++.+++ .++||-+.+|.
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE----------~~Rv~pvi~~l~~-~~v~iSIDT~~----- 90 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEE----------LNRVLPVVEAIVG-FDVKISVDTFR----- 90 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHH----------HHHHHHHHHHHTT-SSSEEEEECSC-----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHH----------HHHHHHHHHHhhc-CCCeEEEECCC-----
Confidence 3457788999999999999999998888886653222221 1234567777775 68999999874
Q ss_pred cCHHHHHHHHHHcCCcEEEecCCCh-hhHHHHHHHHHHcCCCeEEEeCCCCh-------------HHHHHHHHHhC--Cc
Q 021527 154 RGVDNFMSTVRDIGIRGLVVPDVPL-EETESLQKEAMKNKIELVLFTTPTTP-------------TDRMKAIVEAS--EG 217 (311)
Q Consensus 154 ~g~~~fi~~~~~aGadGviipDlp~-ee~~~~~~~~~~~gi~~I~lisp~t~-------------~eri~~i~~~a--~g 217 (311)
.+-++.+.++|++ ||.|..- ..-.++.+.+.+++...|++=...++ .+|+....+.. ..
T Consensus 91 ---~~Va~~al~aGa~--iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~ 165 (270)
T 4hb7_A 91 ---SEVAEACLKLGVD--MINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSN 165 (270)
T ss_dssp ---HHHHHHHHHHTCC--EEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred ---HHHHHHHHHhccc--eeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 2456778899998 5677532 11235667788999887765332222 12333222211 12
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVA 269 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~ 269 (311)
-|.+-...|. | + ....-.++++++.+. .+.|+++| +|...-+.+++
T Consensus 166 ~IilDPGiGF-g-K--t~~~N~~ll~~l~~~~~lg~PvLvG--~SRKsfig~~l 213 (270)
T 4hb7_A 166 KIWLDPGIGF-A-K--TRNEEAEVMARLDELVATEYPVLLA--TSRKRFTKEMM 213 (270)
T ss_dssp GEEEECCTTS-S-C--CHHHHHHHHTCHHHHHTTCSCBEEC--CTTSHHHHHHH
T ss_pred eEEEeCCCCc-c-c--ccccHHHHHhhHHHHhcCCCCEEEE--ecHHHHHHHHh
Confidence 3666665553 2 1 122334566666553 47899986 33333344443
No 238
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=97.21 E-value=0.07 Score=49.09 Aligned_cols=206 Identities=15% Similarity=0.183 Sum_probs=119.5
Q ss_pred HHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHHH
Q 021527 52 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNAI 127 (311)
Q Consensus 52 ~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~~ 127 (311)
..|.++++++++ +..+++=|. -.++.++++|+|+|-+| |+-. ...+. ..+++++.
T Consensus 7 ~~lr~~k~~g~~--i~~~tayDa------~sA~l~e~aG~d~ilvG--------dSl~-----~~~lG~~dt~~vTldem 65 (275)
T 1o66_A 7 NTLQKMKAAGEK--IAMLTAYES------SFAALMDDAGVEMLLVG--------DSLG-----MAVQGRKSTLPVSLRDM 65 (275)
T ss_dssp HHHHHHHHHTCC--EEEEECCSH------HHHHHHHHTTCCEEEEC--------TTHH-----HHTTCCSSSTTCCHHHH
T ss_pred HHHHHHHhCCCc--EEEEeCcCH------HHHHHHHHcCCCEEEEC--------HHHH-----HHHcCCCCCCCCCHHHH
Confidence 356666666665 345555454 56788899999999776 2100 01111 12689999
Q ss_pred HHHHHHhhccCCCcEE-EEecCcchhcc--CHHHHHH---HHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEE--Ee
Q 021527 128 LSMLKEVVPQMSCPIA-LFTYYNPILKR--GVDNFMS---TVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL--FT 199 (311)
Q Consensus 128 ~~~i~~ir~~~~iPii-lm~Y~n~i~~~--g~~~fi~---~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~--li 199 (311)
+..++.|++-.+.|++ ... |+-.| +.++-++ ++.++|+++|-+=|- +|..+..+.+.+.|+.+.- .+
T Consensus 66 i~h~~aV~r~~~~~~vvaD~---pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg--~e~~~~I~al~~agIpV~gHiGL 140 (275)
T 1o66_A 66 CYHTECVARGAKNAMIVSDL---PFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG--VWMAETTEFLQMRGIPVCAHIGL 140 (275)
T ss_dssp HHHHHHHHHHCSSSEEEEEC---CTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS--GGGHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHhhCCCCeEEEEC---CCCCccCCHHHHHHHHHHHHHcCCcEEEECCc--HHHHHHHHHHHHcCCCeEeeecc
Confidence 9999999887776544 432 12122 3454443 566699999988775 4566667777788986541 12
Q ss_pred CCCCh---------------H---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCC
Q 021527 200 TPTTP---------------T---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISK 261 (311)
Q Consensus 200 sp~t~---------------~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst 261 (311)
+|.+. + +|.+.+.+..-..+++. + ++. +..+++.+.+++|+ +|.|=..
T Consensus 141 tPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE---~-------vp~---~~a~~it~~l~iP~-igIGaG~ 206 (275)
T 1o66_A 141 TPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLME---C-------VLA---ELAKKVTETVSCPT-IGIGAGA 206 (275)
T ss_dssp CGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEE---S-------CCH---HHHHHHHHHCSSCE-EEESSCS
T ss_pred CceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEe---c-------CCH---HHHHHHHHhCCCCE-EEECCCC
Confidence 22221 1 23333333222334443 1 222 46778888889998 5665542
Q ss_pred HHHHHHHHHcCCcEEEEhhH------------hhchhhhcCCchhHHHHHHHHHHHHHhh
Q 021527 262 PEHVQQVAGWGADGVIVGSA------------MVKLLGEAQSPEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 262 ~e~v~~v~~~GADGvIVGSa------------iv~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (311)
++||=|.=.. |+|...+ ..+...+.+++|+++.|..
T Consensus 207 ----------~~dgQvLV~~D~lG~~~~~~pkf~k~y~~--~~~~~~~a~~~y~~~V~~~ 254 (275)
T 1o66_A 207 ----------DCDGQVLVMHDMLGIFPGKTAKFVKNFMQ--GHDSVQAAVRAYVAEVKAK 254 (275)
T ss_dssp ----------CSSEEEECHHHHTTCSSSSCCTTCCCSST--TCSSHHHHHHHHHHHHHHT
T ss_pred ----------CCCcceeeHHhhcCCCCCCCCCchhhhhh--HHHHHHHHHHHHHHHHhcC
Confidence 3677665332 2222221 1234567889999998864
No 239
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=97.21 E-value=0.02 Score=53.52 Aligned_cols=176 Identities=15% Similarity=0.152 Sum_probs=106.5
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~------------~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 102 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTT----GESA------------TLDVEEHIQVIRRVVDQVKGRIPVIAGTGAN 102 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGG----GTGG------------GCCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 45667899999999999999999884111 0111 13555555666665543 368998876555
Q ss_pred chhccCHHHHHHHHHHcCCcEEEecC-----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVPD-----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviipD-----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++.- ...++..+ |...+...++.++++=.| ..+.+-+.++++ -..+
T Consensus 103 st~--eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 179 (314)
T 3qze_A 103 STR--EAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK-VPNI 179 (314)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT-STTE
T ss_pred CHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc-CCCE
Confidence 332 124577788999999998841 12244444 556667778887766433 334566666654 3455
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ +.+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 180 vgiKd---ssg-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~Ga~G~is~~a 229 (314)
T 3qze_A 180 IGIKE---ATG-------DL-QRAKEVIERVGKDFLVYSGDD----ATAVELMLLGGKGNISVTA 229 (314)
T ss_dssp EEEEE---CSC-------CH-HHHHHHHHHSCTTSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEEc---CCC-------CH-HHHHHHHHHcCCCeEEEecCh----HHHHHHHHCCCCEEEecHH
Confidence 54411 112 12 3345554443 355655553 3466677799999998876
No 240
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.20 E-value=0.0037 Score=62.10 Aligned_cols=126 Identities=15% Similarity=0.166 Sum_probs=71.1
Q ss_pred HHHHHHHHHcCCcEEEecCCC---hhhHHHHHHHHHHc--C-CCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccC-
Q 021527 157 DNFMSTVRDIGIRGLVVPDVP---LEETESLQKEAMKN--K-IELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTG- 229 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp---~ee~~~~~~~~~~~--g-i~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG- 229 (311)
.+.++.+.+.|++.+.+ |.. .....+..+.+++. + +..+. -.-.+ .+..+.+.+....++-+ ...|.+.
T Consensus 244 ~e~~~~l~e~gv~~l~V-d~~~g~~~~~~~~i~~lk~~~~~~~~Vi~-G~V~t-~~~a~~l~~aGad~I~V-g~~~g~~~ 319 (503)
T 1me8_A 244 RERVPALVEAGADVLCI-DSSDGFSEWQKITIGWIREKYGDKVKVGA-GNIVD-GEGFRYLADAGADFIKI-GIGGGSIC 319 (503)
T ss_dssp HHHHHHHHHHTCSEEEE-CCSCCCSHHHHHHHHHHHHHHGGGSCEEE-EEECS-HHHHHHHHHHTCSEEEE-CSSCSTTC
T ss_pred HHHHHHHHhhhccceEE-ecccCcccchhhHHHHHHHhCCCCceEee-ccccC-HHHHHHHHHhCCCeEEe-cccCCcCc
Confidence 34477788889997655 221 11122333444444 3 44432 12223 34444455555555544 3222111
Q ss_pred -CC--CCCCchHHHHHHHHhhcC---------CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 230 -AR--ASISGHVQTLLREIKESS---------TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 230 -~~--~~~~~~~~~~l~~vk~~~---------~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
.+ .+........+.++.+.. ++||++.+||.++.++.+.+.+|||+|.+||.|....
T Consensus 320 ~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~ 388 (503)
T 1me8_A 320 ITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFE 388 (503)
T ss_dssp CSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBT
T ss_pred ccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccc
Confidence 11 111111223344443321 6999999999999999999999999999999997643
No 241
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.20 E-value=0.0015 Score=57.66 Aligned_cols=47 Identities=30% Similarity=0.391 Sum_probs=42.7
Q ss_pred HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 238 VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.++++++.+++|+++++||+++++++++.+.|||+|.+|+.+..
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 35678899988899999999999999999999999999999998764
No 242
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=97.19 E-value=0.018 Score=53.98 Aligned_cols=177 Identities=12% Similarity=0.084 Sum_probs=108.5
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTG----E~~------------~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 90 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNA----EAF------------LLTREERAQLIATARKAVGPDFPIMAGVGAH 90 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGG----TGG------------GSCHHHHHHHHHHHHHHHCTTSCEEEECCCS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCcccc----Chh------------hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 556778999999999999999988851110 111 13555556666666553 468998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--CC-----ChhhHHH-HHHHHHHcCCCeEEEeCCC------ChHHHHHHHHHhC
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--DV-----PLEETES-LQKEAMKNKIELVLFTTPT------TPTDRMKAIVEAS 215 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--Dl-----p~ee~~~-~~~~~~~~gi~~I~lisp~------t~~eri~~i~~~a 215 (311)
... ..-++.+.+.++|+||+++. -. ..++..+ |...++..++.++++=.|. .+.+-+.++++.-
T Consensus 91 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~ 168 (318)
T 3qfe_A 91 STR--QVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKN 168 (318)
T ss_dssp SHH--HHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHC
T ss_pred CHH--HHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhC
Confidence 332 12357778899999999883 11 1244444 5566677788877765553 2356666776534
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC---CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESS---TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~---~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
..++.+=. .+| ++ ..+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 169 pnIvgiKd---ssg-------d~-~~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 222 (318)
T 3qfe_A 169 PNVVGVKL---TCA-------SV-GKITRLAATLPPAAFSVFGGQS----DFLIGGLSVGSAGCIAAFA 222 (318)
T ss_dssp TTEEEEEE---SSC-------CH-HHHHHHHHHSCGGGCEEEESCG----GGHHHHHHTTCCEEECGGG
T ss_pred CCEEEEEe---CCC-------CH-HHHHHHHHhcCCCCEEEEEecH----HHHHHHHHCCCCEEEecHH
Confidence 55654421 112 12 2344444332 345655554 3455667799999998876
No 243
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=97.19 E-value=0.071 Score=48.77 Aligned_cols=207 Identities=16% Similarity=0.137 Sum_probs=119.9
Q ss_pred HHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHHH
Q 021527 52 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNAI 127 (311)
Q Consensus 52 ~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~~ 127 (311)
..|.++++++++ +..+++=|. -.++.++++|+|+|-+| |+ . ....+. ..+++++.
T Consensus 7 ~~lr~~k~~g~~--i~~~tayD~------~sA~l~e~aG~d~ilvG--------ds-l----~~~~lG~~dt~~vtldem 65 (264)
T 1m3u_A 7 SLLQKYKQEKKR--FATITAYDY------SFAKLFADEGLNVMLVG--------DS-L----GMTVQGHDSTLPVTVADI 65 (264)
T ss_dssp HHHHHHHHHTCC--EEEEECCSH------HHHHHHHHHTCCEEEEC--------TT-H----HHHTTCCSSSTTCCHHHH
T ss_pred HHHHHHHHCCCc--EEEEeCcCH------HHHHHHHHcCCCEEEEC--------HH-H----HHHHcCCCCCCCcCHHHH
Confidence 356666666665 344555454 56788899999999987 11 0 001111 12688999
Q ss_pred HHHHHHhhccCCCcE-EEEecCcchhccCHHHHHH---HHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEE--EeCC
Q 021527 128 LSMLKEVVPQMSCPI-ALFTYYNPILKRGVDNFMS---TVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL--FTTP 201 (311)
Q Consensus 128 ~~~i~~ir~~~~iPi-ilm~Y~n~i~~~g~~~fi~---~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~--lisp 201 (311)
+..++.|++-.+.|+ +...=|-. |. +.++-++ ++.++|+++|-+=|- +|..+..+.+.+.|+.+.- -++|
T Consensus 66 i~h~~aV~r~~~~~~vvaD~pfgs-y~-~~~~a~~~a~rl~kaGa~aVklEgg--~e~~~~I~al~~agipV~gHiGLtP 141 (264)
T 1m3u_A 66 AYHTAAVRRGAPNCLLLADLPFMA-YA-TPEQAFENAATVMRAGANMVKIEGG--EWLVETVQMLTERAVPVCGHLGLTP 141 (264)
T ss_dssp HHHHHHHHHHCTTSEEEEECCTTS-SS-SHHHHHHHHHHHHHTTCSEEECCCS--GGGHHHHHHHHHTTCCEEEEEESCG
T ss_pred HHHHHHHHhhCCCCcEEEECCCCC-cC-CHHHHHHHHHHHHHcCCCEEEECCc--HHHHHHHHHHHHCCCCeEeeecCCc
Confidence 999999988777654 44321100 11 4454443 666699999988775 4566667777788987551 1222
Q ss_pred -------------CChH------HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCH
Q 021527 202 -------------TTPT------DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKP 262 (311)
Q Consensus 202 -------------~t~~------eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~ 262 (311)
.+.. +|.+.+.+..-..+++. + ++. +..+++.+.+++|+ +|.|=..
T Consensus 142 q~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE---~-------vp~---~~a~~it~~l~iP~-igIGag~- 206 (264)
T 1m3u_A 142 QSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLE---C-------VPV---ELAKRITEALAIPV-IGIGAGN- 206 (264)
T ss_dssp GGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEE---S-------CCH---HHHHHHHHHCSSCE-EEESSCT-
T ss_pred eeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEe---c-------CCH---HHHHHHHHhCCCCE-EEeCCCC-
Confidence 2322 23333333233334443 1 222 46778888889998 5666542
Q ss_pred HHHHHHHHcCCcEEEEhhH------------hhchhhhcCCchhHHHHHHHHHHHHHhh
Q 021527 263 EHVQQVAGWGADGVIVGSA------------MVKLLGEAQSPEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 263 e~v~~v~~~GADGvIVGSa------------iv~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (311)
++||=|.=.. |+|...+ ..+...+.+++|+++.|..
T Consensus 207 ---------~~dgQvLV~~D~lG~~~~~~pkf~k~y~~--~~~~~~~a~~~y~~~V~~~ 254 (264)
T 1m3u_A 207 ---------VTDGQILVMHDAFGITGGHIPKFAKNFLA--ETGDIRAAVRQYMAEVESG 254 (264)
T ss_dssp ---------TSSEEEECHHHHTTCSCSSCCTTCCCSST--TTSSHHHHHHHHHHHHHHT
T ss_pred ---------CCCcceeeHHhhcCCCCCCCCCcchhhhh--hHHHHHHHHHHHHHHHhcC
Confidence 3677665322 2222211 1234567889999998864
No 244
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=97.18 E-value=0.0098 Score=64.86 Aligned_cols=183 Identities=15% Similarity=0.107 Sum_probs=109.6
Q ss_pred CChhhHHHHHHHHHHCCCCE--EEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEE-----
Q 021527 74 PDLSTTAEALKLLDSCGSDI--IELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALF----- 145 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~--IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm----- 145 (311)
-+.++.+++++.|++.|+|+ ||++- |-.... +.+.+ +-+- ++.++++++. .++++..+
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~g--------ga~f~~-~~~f~--~~~p---~e~l~~~~~~~~~~~~~~l~R~~n 635 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWG--------GATFDV-SMRFL--TEDP---WERLALIREGAPNLLLQMLLRGAN 635 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEE--------TTHHHH-HHHHH--CCCH---HHHHHHHHHHCTTSEEEEEEETTT
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCC--------CCccHH-HHhhc--CCCH---HHHHHHHHHHchhhHHHHHhcccc
Confidence 55678999999999998777 99830 111111 11111 1122 2344444433 34566655
Q ss_pred --ecCcchhccCHHHHHHHHHHcCCcEEEecCCC--hhhHHHHHHHHHHcCCCeEEEeCCC----------ChHHHH---
Q 021527 146 --TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVP--LEETESLQKEAMKNKIELVLFTTPT----------TPTDRM--- 208 (311)
Q Consensus 146 --~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp--~ee~~~~~~~~~~~gi~~I~lisp~----------t~~eri--- 208 (311)
+|.+ .-....++|++.+.++|+|.+-+.|-. ++......+.+++.|......++.+ ++.+..
T Consensus 636 ~vg~~~-~~~~~~~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~ 714 (1165)
T 2qf7_A 636 GVGYTN-YPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNL 714 (1165)
T ss_dssp BTCSSC-CCHHHHHHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHH
T ss_pred cccccc-CCchhHHHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHH
Confidence 2322 111124679999999999998886532 3456778888899996544433211 233433
Q ss_pred -HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE----eeCCCCHHHHHHHHHcCCcEEE
Q 021527 209 -KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV----GFGISKPEHVQQVAGWGADGVI 277 (311)
Q Consensus 209 -~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v----GfGIst~e~v~~v~~~GADGvI 277 (311)
+++.+..-..+++....|. ..|..+.++++.+|+.+++||-+ .+|... .+.-..+++|||.|=
T Consensus 715 ~~~~~~~Ga~~i~l~DT~G~-----~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAv-An~laAv~aGa~~vd 782 (1165)
T 2qf7_A 715 AVELEKAGAHIIAVKDMAGL-----LKPAAAKVLFKALREATGLPIHFHTHDTSGIAA-ATVLAAVEAGVDAVD 782 (1165)
T ss_dssp HHHHHHTTCSEEEEEETTCC-----CCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHH-HHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEEeCccCC-----cCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHH-HHHHHHHHhCCCEEE
Confidence 3333333345666665553 34677889999999988888876 456654 455666789998763
No 245
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=97.17 E-value=0.0021 Score=58.79 Aligned_cols=123 Identities=15% Similarity=0.219 Sum_probs=79.6
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH------------HHHHH-hC--
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM------------KAIVE-AS-- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri------------~~i~~-~a-- 215 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.-+ -++|- +...+ ..
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEt-leere~g~t~~vv~~Ql~~~l~~~~~~ 159 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGES-DAQNEAGETMAVCARQLDAVINTQGVE 159 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCC-HHHHHTTCHHHHHHHHHHHHHHHHCGG
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCc-HHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 456789999999999731 01233333 566788899988877643 33321 11111 11
Q ss_pred ---CceEEEEecCC-ccCCCCCCCchHHHHHHHHhhcC---------CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhH
Q 021527 216 ---EGFVYLVSSIG-VTGARASISGHVQTLLREIKESS---------TKPVAVGFGISKPEHVQQVAGW-GADGVIVGSA 281 (311)
Q Consensus 216 ---~gfiY~vs~~G-~TG~~~~~~~~~~~~l~~vk~~~---------~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSa 281 (311)
.-.|-|.+.-. .||.. ..++...+..+.+|+.. +++|+.|++|+ ++|+.+++.. +.||+-||++
T Consensus 160 ~~~~vvIAYEPvWAIGTG~~-Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGgA 237 (256)
T 1aw2_A 160 ALEGAIIAYEPIWAIGTGKA-ATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVK-PENAAAYFAQPDIDGALVGGA 237 (256)
T ss_dssp GGTTCEEEECCTTTTTSSCC-CCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCC-TTTHHHHTTSTTCCEEEESGG
T ss_pred HcCCEEEEECCHHHhCCCCC-CCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCC-HHHHHHHHcCCCCCeeeecHH
Confidence 12454433221 36643 44556677777777642 47999999998 5999999977 8999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 238 sL~ 240 (256)
T 1aw2_A 238 ALD 240 (256)
T ss_dssp GGC
T ss_pred HhC
Confidence 887
No 246
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=97.17 E-value=0.017 Score=53.42 Aligned_cols=178 Identities=17% Similarity=0.195 Sum_probs=106.5
Q ss_pred CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecC
Q 021527 71 AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYY 148 (311)
Q Consensus 71 ~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~ 148 (311)
-|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 78 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTT----GESPT------------LTFEEHEKVIEFAVKRAAGRIKVIAGTGG 78 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 377888999999999999999999884111 11211 3445555566665543 36898887655
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCc
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEG 217 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~g 217 (311)
|... ..-+..+.+.++|+|++++. - ...++..+ |...+...++..+++=.| +.+.+-+.++++.-..
T Consensus 79 ~~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn 156 (294)
T 2ehh_A 79 NATH--EAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECEN 156 (294)
T ss_dssp SCHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTT
T ss_pred CCHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCC
Confidence 4322 12356777899999999883 1 12244444 455666678877665333 3345666667623345
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
++.+=. .+| ++ ..+.++++.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 157 ivgiKd---s~g-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~a 207 (294)
T 2ehh_A 157 IVASKE---STP-------NM-DRISEIVKRLGESFSVLSGDD----SLTLPMMALGAKGVISVAN 207 (294)
T ss_dssp EEEEEE---CCS-------CH-HHHHHHHHHHCTTSEEEESSG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEEEe---CCC-------CH-HHHHHHHHhcCCCeEEEECcH----HHHHHHHHCCCCEEEeCHH
Confidence 554311 112 11 2344443332 455665543 3455666799999999976
No 247
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.16 E-value=0.0054 Score=57.77 Aligned_cols=132 Identities=12% Similarity=0.144 Sum_probs=77.2
Q ss_pred cCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChH--HHHHHHHHh
Q 021527 137 QMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPT--DRMKAIVEA 214 (311)
Q Consensus 137 ~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~--eri~~i~~~ 214 (311)
.++.||++-. ......+++.+.+.+.|.-|++.... .+....+.+.+++.|+....-+ +..++ ++.+.+.+.
T Consensus 44 ~l~~Pi~~a~----mag~s~~~la~a~~~~gg~g~~~~~~-~~~~~~~i~~~~~~g~~v~v~~-g~~~~~~~~a~~~~~~ 117 (336)
T 1ypf_A 44 KFKLPVVPAN----MQTIIDERIATYLAENNYFYIMHRFQ-PEKRISFIRDMQSRGLIASISV-GVKEDEYEFVQQLAAE 117 (336)
T ss_dssp EESSSEEECS----STTTCCHHHHHHHHHTTCCCCCCCSS-GGGHHHHHHHHHHTTCCCEEEE-CCSHHHHHHHHHHHHT
T ss_pred EecCcEEECC----CCCCChHHHHHHHHhCCCEEEecCCC-CHHHHHHHHHHHhcCCeEEEeC-CCCHHHHHHHHHHHhc
Confidence 3567877732 22233467877666776666666533 3455666777777775332222 22222 334444343
Q ss_pred CCceEEE-EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 215 SEGFVYL-VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 215 a~gfiY~-vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
...+.++ +.. + . +.+....+.++++|+.++.|+++.++|.++|+++++.++|||+++|+.
T Consensus 118 g~~~~~i~i~~-~-~----G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 118 HLTPEYITIDI-A-H----GHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp TCCCSEEEEEC-S-S----CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred CCCCCEEEEEC-C-C----CCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEec
Confidence 3113222 211 1 1 234456788999999886444444457789999999999999999953
No 248
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=97.16 E-value=0.018 Score=53.05 Aligned_cols=178 Identities=16% Similarity=0.146 Sum_probs=106.6
Q ss_pred CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecC
Q 021527 71 AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYY 148 (311)
Q Consensus 71 ~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~ 148 (311)
-|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 78 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTT----GESPT------------LSHEEHKKVIEKVVDVVNGRVQVIAGAGS 78 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 477888999999999999999999874111 11211 3445555566655543 36898887655
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCc
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEG 217 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~g 217 (311)
|... ..-+..+.+.++|+||+++. - ...++..+ |...+...++..+++=.| +.+.+-+.++++.-..
T Consensus 79 ~~t~--~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn 156 (289)
T 2yxg_A 79 NCTE--EAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSN 156 (289)
T ss_dssp SSHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT
T ss_pred CCHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCC
Confidence 4322 12356777889999999883 1 12244444 556667778877665333 2345666667623345
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
++.+=. .+|. + ..+.++++.++.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 157 ivgiK~---s~gd-------~-~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 205 (289)
T 2yxg_A 157 ISAVKE---ANPN-------L-SQVSELIHDAKITVLSGND----ELTLPIIALGGKGVISVVA 205 (289)
T ss_dssp EEEEEE---CCSC-------T-HHHHHHHHHTCSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEEEe---CCCC-------H-HHHHHHHHhCCeEEEECcH----HHHHHHHHCCCCEEEeChh
Confidence 544311 1121 1 2334443333556666643 3455667799999999976
No 249
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=97.16 E-value=0.022 Score=52.65 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=105.8
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 86 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTT----GESAT------------LSVEEHTAVIEAVVKHVAKRVPVIAGTGAN 86 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccc----cCccc------------CCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 55667899999999999999999884111 11211 3455555666665543 468998876555
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++..+++=.| +.+.+-+.++++ -..+
T Consensus 87 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pni 163 (297)
T 3flu_A 87 NTV--EAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE-IPNI 163 (297)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT-STTE
T ss_pred CHH--HHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc-CCCE
Confidence 332 12457778899999998873 1 12244444 556667778887766332 333466666653 3445
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ +.+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 164 vgiKd---ssg-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 213 (297)
T 3flu_A 164 VGVKE---ASG-------NI-GSNIELINRAPEGFVVLSGDD----HTALPFMLCGGHGVITVAA 213 (297)
T ss_dssp EEEEE---CSC-------CH-HHHHHHHHHSCTTCEEEECCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEEe---CCC-------CH-HHHHHHHHhcCCCeEEEECcH----HHHHHHHhCCCCEEEechH
Confidence 44311 111 12 3345554443 345655532 4455667799999998876
No 250
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=97.14 E-value=0.0047 Score=59.89 Aligned_cols=129 Identities=21% Similarity=0.239 Sum_probs=81.7
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCC-----------CeE----------
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKI-----------ELV---------- 196 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi-----------~~I---------- 196 (311)
+++||+--. +..+ ...+++..+.++|.=|+|-..+++|+..+....+++..- .++
T Consensus 41 l~~PIi~a~-M~~V---s~~~lA~Ava~aGGlGvi~~~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~ 116 (400)
T 3ffs_A 41 LKIPLISSA-MDTV---TEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTK 116 (400)
T ss_dssp ESSSEEECS-CTTT---CSSHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHCCC-------------------------
T ss_pred CCCCEEeCC-CCCc---CcHHHHHHHHHCCCEEEeCCCCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCHHHHH
Confidence 577866532 2222 224677778888988987777777776655555543211 000
Q ss_pred ----------------------EEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEE
Q 021527 197 ----------------------LFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVA 254 (311)
Q Consensus 197 ----------------------~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~ 254 (311)
..+.+. ..++++.+.+..-.++.+-+.. +.+..+.+.++++|+..++||+
T Consensus 117 ~~~~~~~~p~~~~d~~g~l~v~~~v~~~-~~e~~~~lveaGvdvIvldta~-------G~~~~~~e~I~~ik~~~~i~Vi 188 (400)
T 3ffs_A 117 SNNNIDAYSNENLDNKGRLRVGAAIGVN-EIERAKLLVEAGVDVIVLDSAH-------GHSLNIIRTLKEIKSKMNIDVI 188 (400)
T ss_dssp ------CCTTCCBCTTSSBCCEEEECCC--CHHHHHHHHHTCSEEEECCSC-------CSBHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHhhhCcchhhccccceeEEeecCCC-HHHHHHHHHHcCCCEEEEeCCC-------CCcccHHHHHHHHHhcCCCeEE
Confidence 011111 1466766666555554332222 2345567889999998789997
Q ss_pred EeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 255 VGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 255 vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
+| ++.|+++++.+.++|||+++||
T Consensus 189 ~g-~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 189 VG-NVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp EE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred Ee-ecCCHHHHHHHHHcCCCEEEEe
Confidence 74 7789999999999999999996
No 251
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=97.13 E-value=0.0048 Score=56.14 Aligned_cols=122 Identities=18% Similarity=0.264 Sum_probs=78.5
Q ss_pred HHHHHHHcCCcEEEecCCC----hhh----HHHHHHHHHHcCCCeEEEeCCCChHHHH--------HH-HHHh----CCc
Q 021527 159 FMSTVRDIGIRGLVVPDVP----LEE----TESLQKEAMKNKIELVLFTTPTTPTDRM--------KA-IVEA----SEG 217 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp----~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri--------~~-i~~~----a~g 217 (311)
-...+++.|++.+|+..-- +.| ...-...+.++|+.+|+-+.- +-++|- .. +... ...
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-~leere~g~t~~vv~~Ql~~~l~~~~~~ 156 (250)
T 1yya_A 78 SARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGE-PLEVREKGEAVPYTLRQLRGSLEGVEPP 156 (250)
T ss_dssp CHHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHTTTCCCS
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 4567899999999996310 112 222445677899998887764 333331 11 1111 111
Q ss_pred -----eEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHHHc-CCcEEEEh
Q 021527 218 -----FVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVAGW-GADGVIVG 279 (311)
Q Consensus 218 -----fiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~~~-GADGvIVG 279 (311)
.|-|.+ ..| ||.. ..++...+..+.+|+. -+++|+.|++|+ ++|+++++.. +.||+-||
T Consensus 157 ~~~~vvIAYEPvWAIG-TG~~-Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 233 (250)
T 1yya_A 157 GPEALVIAYEPVWAIG-TGKN-ATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVN-PKNFADLLSMPNVDGGLVG 233 (250)
T ss_dssp SGGGCEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCC-TTTHHHHHTSTTCCEEEES
T ss_pred HcCcEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCC-HHHHHHHHcCCCCCeeEee
Confidence 344433 333 6643 3455666666666664 258999999998 5999999977 89999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 234 gAsL~ 238 (250)
T 1yya_A 234 GASLE 238 (250)
T ss_dssp GGGSS
T ss_pred HHHhC
Confidence 99887
No 252
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=97.12 E-value=0.033 Score=51.46 Aligned_cols=208 Identities=18% Similarity=0.235 Sum_probs=117.7
Q ss_pred HHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH----cCCCHHHH
Q 021527 52 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA----RGTNFNAI 127 (311)
Q Consensus 52 ~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~----~G~~~~~~ 127 (311)
..|.++++++++ +..+++=|. -.++.++++|+|+|-+| |+-. ...+. ..+++++.
T Consensus 24 ~~lr~~k~~g~~--i~~~tayDa------~sA~l~e~aG~d~ilvG--------dSl~-----~~~lG~~dt~~vTldem 82 (281)
T 1oy0_A 24 HHLQRWKADGHK--WAMLTAYDY------STARIFDEAGIPVLLVG--------DSAA-----NVVYGYDTTVPISIDEL 82 (281)
T ss_dssp HHHHHHHHHTCC--EEEEECCSH------HHHHHHHTTTCCEEEEC--------TTHH-----HHTTCCSSSSSCCGGGT
T ss_pred HHHHHHHhCCCc--EEEEeCcCH------HHHHHHHHcCCCEEEEC--------HHHH-----HHHcCCCCCCCCCHHHH
Confidence 456666666665 445555444 57788899999999776 2100 01111 12678899
Q ss_pred HHHHHHhhccCCCcEEEE-ecCcchhcc--CHHH----HHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeE--EE
Q 021527 128 LSMLKEVVPQMSCPIALF-TYYNPILKR--GVDN----FMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV--LF 198 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm-~Y~n~i~~~--g~~~----fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I--~l 198 (311)
+..++.|++-.+.|+++- . |+-.| +.++ -.+.++++|+++|-+=|- +|..+..+.+.+.|+.+. +.
T Consensus 83 i~h~~aV~r~~~~~~vvaD~---pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg--~e~~~~I~al~~agIpV~gHiG 157 (281)
T 1oy0_A 83 IPLVRGVVRGAPHALVVADL---PFGSYEAGPTAALAAATRFLKDGGAHAVKLEGG--ERVAEQIACLTAAGIPVMAHIG 157 (281)
T ss_dssp HHHHHHHHHHCTTSEEEEEC---CTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBS--GGGHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEEC---CCCcccCCHHHHHHHHHHHHHHhCCeEEEECCc--HHHHHHHHHHHHCCCCEEeeec
Confidence 999999988777675552 1 11112 2333 345567799999988775 355566666777898754 12
Q ss_pred eCCCCh------------H------HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCC
Q 021527 199 TTPTTP------------T------DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGIS 260 (311)
Q Consensus 199 isp~t~------------~------eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIs 260 (311)
++|.+. + +|.+.+.+..-..+++. + ++. +..+++.+.+++|+ +|.|=.
T Consensus 158 LtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE---~-------vp~---~~a~~it~~l~iP~-igIGaG 223 (281)
T 1oy0_A 158 FTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVME---M-------VPA---ELATQITGKLTIPT-VGIGAG 223 (281)
T ss_dssp CCC--------------CHHHHHHHHHHHHHHHHTCSEEEEE---S-------CCH---HHHHHHHHHCSSCE-EEESSC
T ss_pred CCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEe---c-------CCH---HHHHHHHHhCCCCE-EEeCCC
Confidence 233331 1 23333333223334443 1 222 46778888889998 566554
Q ss_pred CHHHHHHHHHcCCcEEEEhhH-hhchhhhc--------CC-chhHHHHHHHHHHHHHhh
Q 021527 261 KPEHVQQVAGWGADGVIVGSA-MVKLLGEA--------QS-PEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 261 t~e~v~~v~~~GADGvIVGSa-iv~~~~~~--------~~-~~~~~~~~~~~~~~l~~~ 309 (311)
. ++||=|.=.. +.-...+. .+ .+...+.+++|+++.|..
T Consensus 224 ~----------~~dgQvLV~~D~lG~~~~~~pkf~k~y~~~~~~~~~a~~~y~~~V~~~ 272 (281)
T 1oy0_A 224 P----------NCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGG 272 (281)
T ss_dssp S----------CSSEEEECHHHHTTCSCSCCCTTCCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred C----------CCCcceeeHhhhcCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHhcC
Confidence 2 3777665332 22211110 01 233467888999988864
No 253
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.11 E-value=0.0042 Score=68.69 Aligned_cols=37 Identities=19% Similarity=0.023 Sum_probs=35.0
Q ss_pred CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 250 TKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 250 ~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
++||++.+||.+..++.+.+.+|||+|-+||++...+
T Consensus 1099 ~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1099 RVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp GCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHT
T ss_pred CceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHH
Confidence 6999999999999999999999999999999998765
No 254
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=97.11 E-value=0.014 Score=54.38 Aligned_cols=184 Identities=17% Similarity=0.168 Sum_probs=109.5
Q ss_pred cEEEEEeC----CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--
Q 021527 64 ALIPYITA----GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-- 137 (311)
Q Consensus 64 ~li~yi~~----G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-- 137 (311)
.+.+.+|| |.-|++.+.+.++.+.++|+|.|-+.---. +++. .+.++-.++++.+.+.
T Consensus 19 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttG----E~~~------------Lt~~Er~~v~~~~~~~~~ 82 (304)
T 3l21_A 19 LLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTG----ESPT------------TTDGEKIELLRAVLEAVG 82 (304)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTT----TGGG------------SCHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCcccc----chhh------------CCHHHHHHHHHHHHHHhC
Confidence 44445555 456678999999999999999998841111 1111 3555556666666553
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecC-----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPD-----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTD 206 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipD-----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~e 206 (311)
-++||+.-+-.|... ..-+..+.+.++|+|++++.- ...++..+ |...++..++.++++=.| ..+.+
T Consensus 83 grvpviaGvg~~~t~--~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~ 160 (304)
T 3l21_A 83 DRARVIAGAGTYDTA--HSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPD 160 (304)
T ss_dssp TTSEEEEECCCSCHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHH
T ss_pred CCCeEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHH
Confidence 468998876544332 124577788999999998841 12245544 455556668877765322 33456
Q ss_pred HHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 207 RMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 207 ri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
-+.++++ -..++.+=. .+| ++ +.+.++....+..++.|.. +.+-..+..|+||+|-|++
T Consensus 161 ~~~~La~-~pnIvgiKd---ssg-------d~-~~~~~~~~~~~f~v~~G~d----~~~l~~l~~Ga~G~is~~~ 219 (304)
T 3l21_A 161 TIRALAS-HPNIVGVXD---AKA-------DL-HSGAQIMADTGLAYYSGDD----ALNLPWLRMGATGFISVIA 219 (304)
T ss_dssp HHHHHHT-STTEEEEEE---CSC-------CH-HHHHHHHHHHCCEEEESSG----GGHHHHHHHTCCEEEESTH
T ss_pred HHHHHhc-CCCEEEEEC---CCC-------CH-HHHHHHhcCCCeEEEeCch----HHHHHHHHcCCCEEEecHH
Confidence 6666653 344554411 111 12 2334433334566766643 3455667799999998864
No 255
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.08 E-value=0.0013 Score=66.29 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=53.2
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCH-----------HHHHHHHHcCCc
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKP-----------EHVQQVAGWGAD 274 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~-----------e~v~~v~~~GAD 274 (311)
+..+.+.+..-..++++...|..+.. .......+.++++++.+++||.+|+||++. |++++++++|||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~-~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad 362 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCP-LKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGAD 362 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCC-GGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEEEeCCcccccc-CCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCC
Confidence 33444433333346666544422111 011224678999988889999999999998 559999999999
Q ss_pred EEEEhhHhhc
Q 021527 275 GVIVGSAMVK 284 (311)
Q Consensus 275 GvIVGSaiv~ 284 (311)
-|+|||+.++
T Consensus 363 ~V~igt~~~~ 372 (555)
T 1jvn_A 363 KVSIGTDAVY 372 (555)
T ss_dssp EEEECHHHHH
T ss_pred EEEECCHHhh
Confidence 9999999876
No 256
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=97.07 E-value=0.018 Score=53.93 Aligned_cols=177 Identities=13% Similarity=0.106 Sum_probs=106.1
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||++-+-.|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtT----GE~~~------------Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 101 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTT----GESPT------------LTHEEHKRIIELCVEQVAKRVPVVAGAGSN 101 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCBEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccc----cCccc------------cCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 45667899999999999999999874111 11211 3455555666665543 368998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+||+++. - ...++..+ |...+...++.++++=.| +.+.+-+.++++.-..+
T Consensus 102 st~--~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 179 (315)
T 3si9_A 102 STS--EAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNI 179 (315)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTE
T ss_pred CHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCE
Confidence 322 12356778899999999883 1 12244444 556667778887766332 33456666676534556
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+|. . +.+.++++.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 180 vgiKd---ssgd----~----~~~~~l~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 229 (315)
T 3si9_A 180 IGVKD---ATGK----I----ERASEQREKCGKDFVQLSGDD----CTALGFNAHGGVGCISVSS 229 (315)
T ss_dssp EEEEE---CSCC----T----HHHHHHHHHHCSSSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEEe---CCCC----H----HHHHHHHHHcCCCeEEEecCH----HHHHHHHHcCCCEEEecHH
Confidence 54421 1221 1 2233443332 455666543 3455667799999998865
No 257
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=97.07 E-value=0.012 Score=54.83 Aligned_cols=177 Identities=14% Similarity=0.143 Sum_probs=102.4
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||++-+-.|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~------------~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 87 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANF----SEQF------------AITDDERDVLTRTILEHVAGRVPVIVTTSHY 87 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGG----GTGG------------GSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cCcc------------cCCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 56778899999999999999998884111 0111 13455555666665543 468999876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--CC------ChhhHHH-HHHHHHHcCCCeEEEeCCC----ChHHHHHHHHHhCC
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--DV------PLEETES-LQKEAMKNKIELVLFTTPT----TPTDRMKAIVEASE 216 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--Dl------p~ee~~~-~~~~~~~~gi~~I~lisp~----t~~eri~~i~~~a~ 216 (311)
... ..-+..+.+.++|+||+++. -. ..++..+ |...++..++..+++=.|. .+.+-+.++++.-.
T Consensus 88 ~t~--~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~p 165 (309)
T 3fkr_A 88 STQ--VCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIE 165 (309)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHST
T ss_pred hHH--HHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCC
Confidence 332 12457778899999999883 21 1244444 5566677788877664442 23466666665445
Q ss_pred ceEEEE-ecCCccCCCCCCCchHHHHHHHHhhcCC--C-cEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 217 GFVYLV-SSIGVTGARASISGHVQTLLREIKESST--K-PVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 217 gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~~~~--~-Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
.++.+= .. +| + .+.+.++++..+ . .++.|..- -.+-..+..|+||+|.|.
T Consensus 166 nIvgiK~~~---~~-------~-~~~~~~~~~~~~~~~~~~~~G~d~---~~l~~~l~~G~~G~i~~n 219 (309)
T 3fkr_A 166 QVAYFXIET---PG-------A-ANKLRELIRLGGDAIEGPWDGEEA---ITLLADLHAGATGAMTGG 219 (309)
T ss_dssp TEEEEEECS---SS-------H-HHHHHHHHHHHGGGCCEEEECGGG---TTHHHHHHTTCCEECCCS
T ss_pred CEEEEECCC---cc-------h-HHHHHHHHHhcCCceeeecCCchH---HHHHHHHHCCCcEEEEhh
Confidence 565432 11 11 1 123444433322 1 12222211 123455679999998664
No 258
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=97.06 E-value=0.025 Score=52.16 Aligned_cols=176 Identities=18% Similarity=0.180 Sum_probs=105.2
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~ 80 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTT----GEAST------------LSMEEHTQVIKEIIRVANKRIPIIAGTGAN 80 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccc----ccccc------------CCHHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 55667899999999999999999874111 11211 3555555666665543 358998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++.++++=.| +.+.+-+.++++ -..+
T Consensus 81 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pni 157 (291)
T 3tak_A 81 STR--EAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAE-IPNI 157 (291)
T ss_dssp SHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTT-STTE
T ss_pred CHH--HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHc-CCCE
Confidence 332 12356778899999999873 1 12244444 556667778887766332 233455666653 3445
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ +.+.++++.+ +..|+.|. -+.+-..+..|+||+|-|++
T Consensus 158 vgiK~---ssg-------d~-~~~~~~~~~~~~~f~v~~G~----d~~~~~~l~~G~~G~is~~~ 207 (291)
T 3tak_A 158 VGIKD---ATG-------DV-PRGKALIDALNGKMAVYSGD----DETAWELMLLGADGNISVTA 207 (291)
T ss_dssp EEEEE---CSC-------CH-HHHHHHHHHHTTSSEEEECC----HHHHHHHHHTTCCEEEESGG
T ss_pred EEEEe---CCC-------CH-HHHHHHHHHcCCCeEEEECc----HHHHHHHHHCCCCEEEechh
Confidence 44311 111 11 2344443332 35565554 35566777899999998866
No 259
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=97.05 E-value=0.042 Score=52.04 Aligned_cols=176 Identities=17% Similarity=0.151 Sum_probs=103.9
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
|.-|++.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++. .-.-++||+.-+-.|..
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTG----E~~------------~Ls~eEr~~vi~~-~~~grvpViaGvg~~st 104 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMG----DWP------------LLTDEQRMEGVER-LVKAGIPVIVGTGAVNT 104 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGG----TGG------------GSCHHHHHHHHHH-HHHTTCCEEEECCCSSH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCc----Chh------------hCCHHHHHHHHHH-HhCCCCcEEEecCCCCH
Confidence 556778999999999999999998741110 111 1344555555555 22346899887655432
Q ss_pred hccCHHHHHHHHHHcCCcEEEec--C----CChhhHHHHH-HHHH-HcCCCeEEEeCC----CChHHHHHHH-HHhCCce
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVP--D----VPLEETESLQ-KEAM-KNKIELVLFTTP----TTPTDRMKAI-VEASEGF 218 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviip--D----lp~ee~~~~~-~~~~-~~gi~~I~lisp----~t~~eri~~i-~~~a~gf 218 (311)
. ..-+..+.+.++|+||+++. - ...++..++. ..++ ..++.++++=.| +.+.+-+.++ ++ -..+
T Consensus 105 ~--eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~-~pnI 181 (344)
T 2hmc_A 105 A--SAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAE-HKNL 181 (344)
T ss_dssp H--HHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHH-CTTE
T ss_pred H--HHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhc-CCCE
Confidence 1 12356777889999999883 2 2234555544 4455 468887766555 2235666666 54 3445
Q ss_pred EEEEecCCccCCCCCCCc-hHHHHHHHHhhcCC--CcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISG-HVQTLLREIKESST--KPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~-~~~~~l~~vk~~~~--~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
+.+= ....+ ++ ..+.++++.++ ..|+.|.. +.+-..+ ..|+||+|-|++
T Consensus 182 vGiK---------dssgp~d~-~~~~~~~~~~~~~f~v~~G~D----~~~l~~l~~~Ga~G~is~~a 234 (344)
T 2hmc_A 182 VGFK---------EFGGPADM-RYAAENITSRDDEVTLMIGVD----TAVVHGFVNCGATGAITGIG 234 (344)
T ss_dssp EEEE---------ECSCHHHH-HHHHHHTSCSSSSCEEEECSG----GGHHHHHHHSCCCEEEESGG
T ss_pred EEEE---------cCCCCCCH-HHHHHHHHHcCCCEEEEECcH----HHHHHHHHHcCCCEEEeCHH
Confidence 4331 11111 22 44666655443 44544443 3445556 789999999977
No 260
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=97.04 E-value=0.02 Score=53.20 Aligned_cols=181 Identities=13% Similarity=0.137 Sum_probs=105.0
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -++ .-.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~------------~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~ 91 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTT----GES------------PTVNEDEREKLVSRTLEIVDGKIPVIVGAGTN 91 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGG----GTG------------GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccc----cch------------hhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCc
Confidence 67788999999999999999999884111 011 114555555666665543 368998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++..+++=.| +.+.+-+.++++.-..+
T Consensus 92 st~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 169 (306)
T 1o5k_A 92 STE--KTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNV 169 (306)
T ss_dssp CHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTE
T ss_pred cHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCE
Confidence 322 12356777889999999883 1 12245554 445555567776665333 23456666666223455
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+|. ...+.++++..... .+..|+.|.. +.+-..+..|+||+|-|++
T Consensus 170 vgiKd---ssgd----~~~~~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 222 (306)
T 1o5k_A 170 VGIXE---ANPD----IDQIDRTVSLTKQARSDFMVWSGND----DRTFYLLCAGGDGVISVVS 222 (306)
T ss_dssp EEEEE---CCCC----HHHHHHHHHHHHHHCTTCEEEESSG----GGHHHHHHHTCCEEEESGG
T ss_pred EEEeC---CCCC----HHHHHHHHHhcCCCCCcEEEEECcH----HHHHHHHHCCCCEEEecHH
Confidence 54411 1121 11222333322210 1455666653 3455666789999999876
No 261
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=97.04 E-value=0.021 Score=54.38 Aligned_cols=137 Identities=14% Similarity=0.120 Sum_probs=96.2
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPI 142 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPi 142 (311)
.+-.|.+.|..+.+.+.+.++.+.+.|.|.+++-+- .+.+...+.++.+|+.+ ++|+
T Consensus 136 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g----------------------~~~~~~~e~v~avr~a~gd~~l 193 (384)
T 2pgw_A 136 AVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVG----------------------RGEKLDLEITAAVRGEIGDARL 193 (384)
T ss_dssp EEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECC----------------------SCHHHHHHHHHHHHTTSTTCEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcC----------------------CCHHHHHHHHHHHHHHcCCcEE
Confidence 444566666677788999999999999999999421 13445567888888876 5666
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
.+- .|. -+..+++.++.+.+.++|+..+- .|
T Consensus 194 ~vD--~n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP--------------------- 224 (384)
T 2pgw_A 194 RLD--ANE------------------------GWSVHDAINMCRKLEKYDIEFIE--QP--------------------- 224 (384)
T ss_dssp EEE--CTT------------------------CCCHHHHHHHHHHHGGGCCSEEE--CC---------------------
T ss_pred EEe--cCC------------------------CCCHHHHHHHHHHHHhcCCCEEe--CC---------------------
Confidence 553 231 11235666777777777776442 11
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHh
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAM 282 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSai 282 (311)
+++...+.++++|+.+++||+.+..+.++++++++++.| +|+|.+.-.-
T Consensus 225 -----------~~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 225 -----------TVSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp -----------SCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred -----------CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 111224568888888899999999999999999999766 7999885433
No 262
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=97.04 E-value=0.002 Score=58.60 Aligned_cols=122 Identities=20% Similarity=0.312 Sum_probs=78.4
Q ss_pred HHHHHHHcCCcEEEecCCC----hhh----HHHHHHHHHHcCCCeEEEeCCCChHHH--------HHHHHHh--------
Q 021527 159 FMSTVRDIGIRGLVVPDVP----LEE----TESLQKEAMKNKIELVLFTTPTTPTDR--------MKAIVEA-------- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp----~ee----~~~~~~~~~~~gi~~I~lisp~t~~er--------i~~i~~~-------- 214 (311)
-...+++.|++.+|+..-- +.| ..+-...+.++|+.+|+-+.- +-++| +....+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 157 (248)
T 1o5x_A 79 SAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGE-SLEQREQNKTIEVITKQVKAFVDLIDNF 157 (248)
T ss_dssp CHHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHTTGGGCCCT
T ss_pred CHHHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhcCChHHHHHHHHHHHHhhhhhh
Confidence 4567899999999996310 112 222445678899998876664 44555 1111111
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVAG-WGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.+|+. . +++|+.|++|+ ++|+++++. -+.||+-||++
T Consensus 158 ~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGgA 234 (248)
T 1o5x_A 158 DNVILVYEPLWAIG-TGKT-ATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVN-TENCSSLIQQEDIDGFLVGNA 234 (248)
T ss_dssp TSEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCC-TTTHHHHHTSTTCCEEEECGG
T ss_pred cCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCC-HHHHHHHHcCCCCCeeEeeHH
Confidence 122333332 333 6643 3455666666666664 1 48999999998 579999986 78999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 235 sL~ 237 (248)
T 1o5x_A 235 SLK 237 (248)
T ss_dssp GGS
T ss_pred HHH
Confidence 887
No 263
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=97.03 E-value=0.031 Score=51.81 Aligned_cols=176 Identities=18% Similarity=0.257 Sum_probs=105.1
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~------------Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 91 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTT----GESPT------------LTSEEKVALYRHVVSVVDKRVPVIAGTGSN 91 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 55677899999999999999999884111 11111 3445555566665543 368998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++.++++=.| +.+.+-+.++++ -..+
T Consensus 92 ~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 168 (301)
T 1xky_A 92 NTH--ASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE-IENI 168 (301)
T ss_dssp CHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT-STTE
T ss_pred CHH--HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-CCCE
Confidence 332 12356778899999999883 1 12245554 455566668877665433 234566666654 3445
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ +.+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 169 vgiKd---ssg-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 218 (301)
T 1xky_A 169 VAIKD---AGG-------DV-LTMTEIIEKTADDFAVYSGDD----GLTLPAMAVGAKGIVSVAS 218 (301)
T ss_dssp EEEEE---CSS-------CH-HHHHHHHHHSCTTCEEEESSG----GGHHHHHHTTCCEEEESTH
T ss_pred EEEEc---CCC-------CH-HHHHHHHHhcCCCeEEEECcH----HHHHHHHHcCCCEEEcCHH
Confidence 43311 111 12 3345554443 345655543 3456667799999999866
No 264
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=97.02 E-value=0.0041 Score=56.78 Aligned_cols=122 Identities=18% Similarity=0.287 Sum_probs=79.1
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH------------HHHHH-hC--
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM------------KAIVE-AS-- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri------------~~i~~-~a-- 215 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.-+ -++|- +...+ ..
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEt-leere~g~t~~vv~~Ql~~~l~~~~~~ 157 (255)
T 1tre_A 79 SAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGET-EAENEAGKTEEVCARQIDAVLKTQGAA 157 (255)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCC-HHHHHTTCHHHHHHHHHHHHHHHHCGG
T ss_pred CHHHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCc-HHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 456789999999999731 01233333 567788999988877643 33321 11111 11
Q ss_pred ---CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc---------CCCcEEEeeCCCCHHHHHHHHH-cCCcEEEEhh
Q 021527 216 ---EGFVYLVS--SIGVTGARASISGHVQTLLREIKES---------STKPVAVGFGISKPEHVQQVAG-WGADGVIVGS 280 (311)
Q Consensus 216 ---~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~---------~~~Pv~vGfGIst~e~v~~v~~-~GADGvIVGS 280 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+. -+++|+.|++|+ ++|+.+++. -+.||+-||+
T Consensus 158 ~~~~vvIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGg 234 (255)
T 1tre_A 158 AFEGAVIAYEPVWAIG-TGKS-ATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVN-ASNAAELFAQPDIDGALVGG 234 (255)
T ss_dssp GGTTCEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCC-TTTHHHHHTSTTCCEEEESG
T ss_pred HcCcEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCC-HHHHHHHHcCCCCCeeEecH
Confidence 12444433 333 6643 4455666766667764 148999999998 579999986 7799999999
Q ss_pred Hhhc
Q 021527 281 AMVK 284 (311)
Q Consensus 281 aiv~ 284 (311)
+-.+
T Consensus 235 AsL~ 238 (255)
T 1tre_A 235 ASLK 238 (255)
T ss_dssp GGGC
T ss_pred HHhC
Confidence 9887
No 265
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.01 E-value=0.032 Score=52.04 Aligned_cols=184 Identities=15% Similarity=0.134 Sum_probs=104.4
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcEEEEecCcc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPIALFTYYNP 150 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPiilm~Y~n~ 150 (311)
|.-|++.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++.+.+. -++||+.-+-.|.
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG----E~~------------~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~ 87 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILG----EAP------------KLDAAEAEAVATRFIKRAKSMQVIVGVSAPG 87 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGG----TGG------------GSCHHHHHHHHHHHHHHCTTSEEEEECCCSS
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCc----Chh------------hCCHHHHHHHHHHHHHHcCCCcEEEecCCCC
Confidence 456678999999999999999998841110 111 13455555666665544 3789988765543
Q ss_pred hhccCHHHHHHHHHHcCCcEEEec--CC--ChhhHHH-HHHHHHHcC--CCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVP--DV--PLEETES-LQKEAMKNK--IELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviip--Dl--p~ee~~~-~~~~~~~~g--i~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
.. ..-+..+.+.++|+|++++. -. +.++..+ |...+...+ +.++++=.| ..+.+-+.++++.-..+
T Consensus 88 t~--~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 165 (313)
T 3dz1_A 88 FA--AMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASC 165 (313)
T ss_dssp HH--HHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSE
T ss_pred HH--HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCE
Confidence 32 12356778899999999883 11 1244444 455566667 887765322 33456666776544556
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHh
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSai 282 (311)
+.+=. .-+| ....+.++++..++. -+.-|+.|..-.. +...+..|+||+|.|..+
T Consensus 166 vgiKd--~~~~----~~~~~~~~~~~~~~~~~~~f~v~~G~d~~~---l~~~l~~G~~G~i~~~~~ 222 (313)
T 3dz1_A 166 VMLKH--EDWP----GLEKITTLRGFQKDGSLRPLSILCGNGGLF---LDFEMERGADGAMTGYCF 222 (313)
T ss_dssp EEEEE--CCSS----CHHHHHHHHHHHHHTSSCCCEEEECGGGTT---HHHHHHHTCCEEEECCSC
T ss_pred EEEEc--CCCC----CHHHHHHHHHhcCccCCCCeEEEeCCcHHH---HHHHHHCCCcEEEeCccc
Confidence 54411 0011 011222323322211 2456766665322 223356899999987543
No 266
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.00 E-value=0.013 Score=54.30 Aligned_cols=176 Identities=14% Similarity=0.099 Sum_probs=104.9
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~------------~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 83 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGST----GEFA------------YLGTAQREAVVRATIEAAQRRVPVVAGVAST 83 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGG----GTGG------------GCCHHHHHHHHHHHHHHHTTSSCBEEEEEES
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cCcc------------ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 55667899999999999999999764111 0111 14555666666666543 468988865444
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCCC-----ChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTPT-----TPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp~-----t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++.++++=.|. .+.+-+.++++ -..+
T Consensus 84 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 160 (300)
T 3eb2_A 84 SVA--DAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAE-HPRI 160 (300)
T ss_dssp SHH--HHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHT-STTE
T ss_pred CHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHc-CCCE
Confidence 222 12356778899999999883 1 12245544 5566677788877765453 33566666643 3455
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ ..+.++++.+ +..|+.|..- .+-..+..|+||+|-|++
T Consensus 161 vgiKd---ssg-------d~-~~~~~~~~~~~~~f~v~~G~d~----~~~~~l~~G~~G~is~~a 210 (300)
T 3eb2_A 161 RYIKD---AST-------NT-GRLLSIINRCGDALQVFSASAH----IPAAVMLIGGVGWMAGPA 210 (300)
T ss_dssp EEEEE---CSS-------BH-HHHHHHHHHHGGGSEEEECTTS----CHHHHHHTTCCEEEEGGG
T ss_pred EEEEc---CCC-------CH-HHHHHHHHHcCCCeEEEeCcHH----HHHHHHhCCCCEEEeChh
Confidence 54411 112 11 2334443332 3455555443 345566789999999876
No 267
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=96.99 E-value=0.027 Score=52.60 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=114.3
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEE--cCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIEL--GVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IEl--G~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
...-++++++.+-+.+.+.+++..+.+.|++-|-. | ||..+|+. .-.+- .++++.||+..+
T Consensus 82 g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrG----Dpp~~~~~----------~~~~A---~dLv~~ir~~~~ 144 (304)
T 3fst_A 82 GLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRG----DLPPGSGK----------PEMYA---SDLVTLLKEVAD 144 (304)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECC----CCC----------------CCCH---HHHHHHHHHHCC
T ss_pred CCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecC----CCCCCCCC----------CCCCH---HHHHHHHHHcCC
Confidence 45688999999999999999999999999988776 6 44333320 01222 345555554444
Q ss_pred CcEEEEecC--cchhccCHHHHHHH---HHHcCCcEEEec-CCChhhHHHHHHHHHHcCCC--eEEEeCCCChHHHHHHH
Q 021527 140 CPIALFTYY--NPILKRGVDNFMST---VRDIGIRGLVVP-DVPLEETESLQKEAMKNKIE--LVLFTTPTTPTDRMKAI 211 (311)
Q Consensus 140 iPiilm~Y~--n~i~~~g~~~fi~~---~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~--~I~lisp~t~~eri~~i 211 (311)
.-|.+-+|- +|-. ...+.-++. =.++|+|.++-- =...+...+|.+.|++.|++ .++-+.|-++...+..+
T Consensus 145 f~IgvA~yPE~Hp~a-~~~~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 145 FDISVAAYPEVHPEA-KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp CEEEEEECTTCCTTC-SCHHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred CeEEEEeCCCcCCCC-CCHHHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 556676663 2222 233333333 346899997653 12235677899999999874 66778888877666665
Q ss_pred HHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCc---EEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 212 VEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKP---VAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 212 ~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~P---v~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
.+ ..|. .+|. ++++++.+.-+-| ..+|.-+. .|+++++.+.|++|+=+-|
T Consensus 224 ~~-------------~~Gv--~iP~---~l~~~l~~~~dd~~~~~~~Gi~~a-~e~~~~L~~~gv~GiH~yt 276 (304)
T 3fst_A 224 AD-------------MTNV--RIPA---WMAQMFDGLDDDAETRKLVGANIA-MDMVKILSREGVKDFHFYT 276 (304)
T ss_dssp HH-------------HHTC--CCCH---HHHHHHTTCTTCHHHHHHHHHHHH-HHHHHHHHHTTCCEEEEEC
T ss_pred HH-------------cCCC--cCCH---HHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHCCCCEEEECC
Confidence 44 1222 3555 4555565544434 33455554 5899999999999995543
No 268
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=96.98 E-value=0.0082 Score=54.63 Aligned_cols=122 Identities=17% Similarity=0.243 Sum_probs=78.4
Q ss_pred HHHHHHHcCCcEEEecCCC----hhh----HHHHHHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh-C--
Q 021527 159 FMSTVRDIGIRGLVVPDVP----LEE----TESLQKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA-S-- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp----~ee----~~~~~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~-a-- 215 (311)
-...+++.|++.+|+..-- +.| ...-...+.++|+.+|+-+.- +-++| ++...+. .
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 157 (250)
T 2j27_A 79 SLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE-TLQERESGRTAVVVLTQIAAIAKKLKKA 157 (250)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHHTCCGG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCC-CHHHhhcccHHHHHHHHHHHHHhcCCHH
Confidence 4567899999999996310 112 222445677889998876664 44555 1111111 1
Q ss_pred ---CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 216 ---EGFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 216 ---~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+.. +++|+.|++|+ ++|+++++ .-+.||+-||
T Consensus 158 ~~~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 234 (250)
T 2j27_A 158 DWAKVVIAYEAVWAIG-TGKV-ATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVN-GKNARTLYQQRDVNGFLVG 234 (250)
T ss_dssp GGGGEEEEEECGGGTT-SSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCC-TTTHHHHHTSTTCCEEEES
T ss_pred HhCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCC-HHHHHHHHcCCCCCeeeee
Confidence 22344433 333 6743 44556666666677641 47999999998 57999988 6779999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 235 gAsL~ 239 (250)
T 2j27_A 235 GASLK 239 (250)
T ss_dssp GGGGS
T ss_pred hHHHH
Confidence 99887
No 269
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=96.97 E-value=0.12 Score=46.80 Aligned_cols=201 Identities=16% Similarity=0.183 Sum_probs=105.1
Q ss_pred CccEEEEEeCCCCCh-------hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHh
Q 021527 62 KVALIPYITAGDPDL-------STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV 134 (311)
Q Consensus 62 ~~~li~yi~~G~P~~-------~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~i 134 (311)
+..|+.=+ ||+. +...++++.+... +.++.+|.+|=. +.||- .++.++++
T Consensus 13 ~~~LcVgL---D~~~~~~~~~~~~~~~lv~~l~~~-v~~~Kvg~~lf~--~~G~~-----------------g~~~l~~l 69 (255)
T 3qw3_A 13 RSLLCVGL---DPRAKTAAAAVEECKRLIEQTHEY-AAAYKPNAAFFE--FFGAE-----------------GWAALSEV 69 (255)
T ss_dssp TCCEEEEE---CCCCSSHHHHHHHHHHHHHHHGGG-CSEEEEBHHHHH--TTTHH-----------------HHHHHHHH
T ss_pred CCCEEEEe---CCCchhcchHHHHHHHHHHHhCCc-CcEEEEcHHHHH--hcCHH-----------------HHHHHHHH
Confidence 34455444 6773 5577888887655 899999988721 22432 12344444
Q ss_pred hc--cCCCcEEEEecCcchhccCHHHHHHHHH-HcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCC--------
Q 021527 135 VP--QMSCPIALFTYYNPILKRGVDNFMSTVR-DIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTT-------- 203 (311)
Q Consensus 135 r~--~~~iPiilm~Y~n~i~~~g~~~fi~~~~-~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t-------- 203 (311)
.+ +.+.||++..-..+|-.+ ...+++.+. +.|+|.+.++-..-.+ .+....+..|..+..++.-+.
T Consensus 70 ~~~~~~g~~VflDlK~~DI~nT-v~~~a~~~~~~lg~d~vTvh~~~G~~--~l~~~~~~~~~gv~vL~~tS~~~~~~~q~ 146 (255)
T 3qw3_A 70 IRAVPAGIPVVLDAKRGDIADT-ADAYATSAFKHLNAHAITASPYMGSD--SLQPFMRYPDKAVFVLCKTSNKGSNDLQC 146 (255)
T ss_dssp HHHSCTTCCBEEEEEECCCHHH-HHHHHHHHHTTSCCSEEEECCTTCHH--HHHHHHTCTTSEEEEEEECCSGGGGTTTT
T ss_pred HHHhcCCCeEEEEeecCCcHHH-HHHHHHHHHHHcCCCEEEEcccCCHH--HHHHHHHhhCCceEEEEeCCCccHHHHHh
Confidence 33 146789998766656443 346777775 6999999997443222 222222223433333321111
Q ss_pred -------hHHHHHHHHHh-C--CceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE-eeCCCCHHHHHHHHHc
Q 021527 204 -------PTDRMKAIVEA-S--EGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV-GFGISKPEHVQQVAGW 271 (311)
Q Consensus 204 -------~~eri~~i~~~-a--~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v-GfGIst~e~v~~v~~~ 271 (311)
..+.+.+.++. . .|.+=+|. |.| .+ +.++.+|+.+ +.++++ |.|.. ..+..++.+.
T Consensus 147 ~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~--~at------~~---~e~~~ir~~~~~~~~l~PGIg~q-g~tp~~a~~~ 214 (255)
T 3qw3_A 147 LRVGDRYLYEAVAERAEGPWNVNGNVGLVV--GAT------DP---VALARVRARAPTLWFLVPGIGAQ-GGSLKASLDA 214 (255)
T ss_dssp SEETTEEHHHHHHHHHHTGGGGGSCEEEEE--CSS------CH---HHHHHHHHHCSSCCEEECCC------CHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhhhhCCeEEEE--CCC------CH---HHHHHHHHHCCCCeEEECCcCCC-CCCHHHHHHc
Confidence 12344344443 2 23232221 111 11 3477777765 456655 55543 1345556667
Q ss_pred CCc----E--EEEhhHhhchhhhcCCchhHHHHHHHHHH
Q 021527 272 GAD----G--VIVGSAMVKLLGEAQSPEEGLKELEKFAK 304 (311)
Q Consensus 272 GAD----G--vIVGSaiv~~~~~~~~~~~~~~~~~~~~~ 304 (311)
|+| + +|||-.|.+. .++.+..+++.+-++
T Consensus 215 G~d~~~~~~livvGR~I~~A----~dp~~aa~~i~~~i~ 249 (255)
T 3qw3_A 215 GLRADGSGMLINVSRGLARA----ADPRAAAKELCEEIN 249 (255)
T ss_dssp HCCTTSCCEEEEESHHHHTS----SCHHHHHHHHHHHHH
T ss_pred CCCcccCeeEEEeChhhcCC----CCHHHHHHHHHHHHH
Confidence 899 6 9999999884 234444444443333
No 270
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=96.95 E-value=0.011 Score=54.11 Aligned_cols=122 Identities=19% Similarity=0.305 Sum_probs=78.3
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHHH------------HHHH-Hh-C-
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDRM------------KAIV-EA-S- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri------------~~i~-~~-a- 215 (311)
-...+++.|++.+|+..- .+.| ..+-...+.++|+.+|+-+.-+ -++|- +... .. .
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEt-leere~g~t~~vv~~Ql~~~l~~~~~~ 158 (257)
T 2yc6_A 80 SVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGET-LDERKANRTMEVNIAQLEALGKELGES 158 (257)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCC-HHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCc-HHHHhcCCHHHHHHHHHHHHHhcCCCh
Confidence 456789999999999631 1122 2224556788999988877643 33321 1111 12 1
Q ss_pred -----CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHHHc-CCcEEE
Q 021527 216 -----EGFVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVAGW-GADGVI 277 (311)
Q Consensus 216 -----~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~~~-GADGvI 277 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+. -+++|+.|++|+ ++|+.+++.. +.||+-
T Consensus 159 ~~~~~~vvIAYEPvWAIG-TG~~-Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~L 235 (257)
T 2yc6_A 159 KMLWKEVVIAYEPVWSIG-TGVV-ATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSAN-GSNNEKLGQCPNIDGFL 235 (257)
T ss_dssp HHHHHTEEEEECCGGGTT-TSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCC-TTTHHHHHTSTTCCEEE
T ss_pred hhccCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccC-HHHHHHHHcCCCCCeee
Confidence 11344433 333 6743 3455566666666664 258999999998 5899999977 899999
Q ss_pred EhhHhhc
Q 021527 278 VGSAMVK 284 (311)
Q Consensus 278 VGSaiv~ 284 (311)
||++-.+
T Consensus 236 VGgAsL~ 242 (257)
T 2yc6_A 236 VGGASLK 242 (257)
T ss_dssp ESGGGGS
T ss_pred ecHHHHH
Confidence 9999886
No 271
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.92 E-value=0.01 Score=53.91 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=41.6
Q ss_pred HHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 240 TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 240 ~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+.++.+|+.+++||.++.+|.++.++.++..+|||+|.+|++...
T Consensus 96 ~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 96 LDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp HHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred HHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH
Confidence 578889999999999999999999999999999999999998775
No 272
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=96.90 E-value=0.0017 Score=59.28 Aligned_cols=122 Identities=19% Similarity=0.254 Sum_probs=79.6
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH------------HHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM------------KAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri------------~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++|- +...+.
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 158 (255)
T 1b9b_A 80 SPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGE-TLEEREKGLTFCVVEKQVREGFYGLDKE 158 (255)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHHTCHHHHHHHHHHHHHTTCCHH
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 456789999999999631 11233333 66778899998877664 434431 111111
Q ss_pred --CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 215 --SEGFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 215 --a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
..-.|-|.+ ..| ||. +..++...+..+.+|+.. +++|+.|++|+ ++|+.+++ .-+.||+-||
T Consensus 159 ~~~~~vIAYEPvWAIG-TG~-~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 235 (255)
T 1b9b_A 159 EAKRVVIAYEPVWAIG-TGR-VATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIK-PDNFLGLIVQKDIDGGLVG 235 (255)
T ss_dssp HHTTCEEEECCGGGSS-SSC-CCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCC-HHHHTTTSSSTTCCEEEES
T ss_pred HcCCEEEEECCHHHhC-CCC-CCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcCC-HHHHHHHHcCCCCCeeEee
Confidence 123444433 333 664 344556666666676641 37999999997 79999988 6779999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 236 gASLk 240 (255)
T 1b9b_A 236 GASLK 240 (255)
T ss_dssp GGGTS
T ss_pred hHhhc
Confidence 99887
No 273
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.90 E-value=0.032 Score=51.60 Aligned_cols=178 Identities=12% Similarity=0.062 Sum_probs=107.1
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEec
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTY 147 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y 147 (311)
--|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||+.-+-
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt----GE~~------------~Ls~~Er~~v~~~~~~~~~grvpviaGvg 77 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQIKHGAHGLVPVGTT----GESP------------TLTEEEHKRVVALVAEQAQGRVPVIAGAG 77 (297)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCSEEECSSGG----GTGG------------GSCHHHHHHHHHHHHHHHTTSSCBEEECC
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccc----cchh------------hCCHHHHHHHHHHHHHHhCCCCeEEEccC
Confidence 4477888999999999999999999874110 0111 13455555666665543 3689888765
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCC
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASE 216 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~ 216 (311)
.|... ..-+..+.+.++|+|++++. - ...++..+ |...+...++..+++=.| +.+.+-+.++++ -.
T Consensus 78 ~~~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~p 154 (297)
T 2rfg_A 78 SNNPV--EAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA-LP 154 (297)
T ss_dssp CSSHH--HHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT-ST
T ss_pred CCCHH--HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-CC
Confidence 54322 12356777889999999884 1 12244444 455666778877665333 234566666654 34
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.++.+=. .+|. + +.+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 155 nIvgiKd---s~gd-------~-~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 206 (297)
T 2rfg_A 155 RIVGVKD---ATTD-------L-ARISRERMLINKPFSFLSGDD----MTAIAYNASGGQGCISVSA 206 (297)
T ss_dssp TEEEEEE---CSCC-------T-THHHHHHTTCCSCCEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred CEEEEEe---CCCC-------H-HHHHHHHHhcCCCEEEEeCcH----HHHHHHHHCCCCEEEecHH
Confidence 4543311 1221 1 2355555544 345655543 3455666799999999976
No 274
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.89 E-value=0.033 Score=51.96 Aligned_cols=175 Identities=15% Similarity=0.166 Sum_probs=105.3
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~------------~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~ 86 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTT----AESP------------TLTHDEELELFAAVQKVVNGRVPLIAGVGTN 86 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTT----TTGG------------GSCHHHHHHHHHHHHHHSCSSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 44567899999999999999998875111 1121 14555666677666654 368998876554
Q ss_pred chhccCHHHHHHHHHHcCC-cEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCc
Q 021527 150 PILKRGVDNFMSTVRDIGI-RGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEG 217 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGa-dGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~g 217 (311)
... ..-++.+.+.++|+ ||+++. - ...++..+ |...+...++.++++=.| +.+.+-+.++++. ..
T Consensus 87 ~t~--~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~-pn 163 (311)
T 3h5d_A 87 DTR--DSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH-PN 163 (311)
T ss_dssp SHH--HHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS-TT
T ss_pred CHH--HHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC-CC
Confidence 332 12456778888997 998873 1 12245554 455556668877766433 3345666666653 44
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
++.+ +... ++ +.+.++++.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 164 Ivgi---------Kdss--d~-~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~Ga~G~is~~a 213 (311)
T 3h5d_A 164 IIGV---------KECT--SL-ANMAYLIEHKPEEFLIYTGED----GDAFHAMNLGADGVISVAS 213 (311)
T ss_dssp EEEE---------EECS--CH-HHHHHHHHHCCSSCEEEECCG----GGHHHHHHHTCCEEEESTH
T ss_pred EEEE---------EeCC--CH-HHHHHHHHHcCCCEEEEECcH----HHHHHHHHcCCCEEEechh
Confidence 5433 1111 22 3455555544 345555543 3455666789999999876
No 275
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=96.89 E-value=0.0055 Score=55.85 Aligned_cols=122 Identities=16% Similarity=0.288 Sum_probs=78.4
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH------------HHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM------------KAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri------------~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++|- +...+.
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 156 (252)
T 2btm_A 78 SPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGE-SLEEREAGQTNAVVASQVEKALAGLTPE 156 (252)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHTTCCHH
T ss_pred CHHHHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 456788999999999731 01233333 56678889998887764 333331 111111
Q ss_pred --CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 215 --SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 215 --a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
..-.|-|.+ ..| ||.. ..+....+..+.+|+. -+++|+.|++|+ ++|+.+++ .-+.||+-||
T Consensus 157 ~~~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 233 (252)
T 2btm_A 157 QVKQAVIAYEPIWAIG-TGKS-STPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVK-PDNIRDFLAQQQIDGALVG 233 (252)
T ss_dssp HHTTCEEEECCGGGTT-TSCC-CCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCC-TTTHHHHHTSTTCCEEEES
T ss_pred HcCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCC-HHHHHHHHcCCCCCeeEec
Confidence 112444433 333 6643 4455566666666664 258999999998 59999998 6779999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 234 gAsL~ 238 (252)
T 2btm_A 234 GASLE 238 (252)
T ss_dssp GGGSS
T ss_pred HHHhC
Confidence 99887
No 276
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=96.87 E-value=0.013 Score=52.75 Aligned_cols=122 Identities=17% Similarity=0.181 Sum_probs=77.6
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHHHHH----------HHH-h----C
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDRMKA----------IVE-A----S 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri~~----------i~~-~----a 215 (311)
-...+++.|++.+|+..- .+.| ..+-...+.++|+.+|+-+.- +-++|-.- ..+ . .
T Consensus 73 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~~~t~~vv~~Ql~~l~~~~~ 151 (233)
T 2jgq_A 73 TSKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGE-ELTTREKGFKAVKEFLSEQLENIDLNYP 151 (233)
T ss_dssp BHHHHHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHHCHHHHHHHHHHHHTTSCTTCT
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhcCchhHHHHHHHHHHhhhhhcc
Confidence 456789999999999631 1122 222455678899998876664 44455321 001 1 1
Q ss_pred CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhHhhc
Q 021527 216 EGFVYLVS--SIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSAMVK 284 (311)
Q Consensus 216 ~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSaiv~ 284 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+.. +++|+.|++|+. +++.+++ .-+.||+-||++-.+
T Consensus 152 ~~vIAYEPvWAIG-TG~~-At~e~a~ev~~~IR~~l~~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsl~ 222 (233)
T 2jgq_A 152 NLVVAYEPIWAIG-TKKS-ASLEDIYLTHGFLKQILNQKTPLLYGGSVNT-QNAKEILGIDSVDGLLIGSASWE 222 (233)
T ss_dssp TEEEEECCGGGTT-C--C-CCHHHHHHHHHHHHHHSCTTSCEEEESSCCT-TTHHHHHTSTTCCEEEESGGGGS
T ss_pred ceEEEEeCHHHhC-CCCC-CCHHHHHHHHHHHHHHHhcCCcEEEcCCcCh-hhHHHHhcCCCCCeeEecHHHhC
Confidence 22333322 333 6743 45666788888888875 589999999985 6666654 667999999999887
No 277
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.86 E-value=0.031 Score=52.85 Aligned_cols=181 Identities=15% Similarity=0.190 Sum_probs=104.4
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~------------Ls~eEr~~vi~~~ve~~~grvpViaGvg~~ 110 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSG----GEFSQ------------LGAEERKAIARFAIDHVDRRVPVLIGTGGT 110 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEEECCSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccc----cChhh------------CCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 55667899999999999999999874111 11111 3445555566655543 368998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..+ |...+...++.++++=.| +.+.+-+.++++.-..+
T Consensus 111 st~--eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnI 188 (343)
T 2v9d_A 111 NAR--ETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNI 188 (343)
T ss_dssp CHH--HHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTE
T ss_pred CHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCE
Confidence 321 12356777889999999883 1 12245554 455566668877665333 23456666666233455
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhh-cCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKE-SSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~-~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+|. ...+.++++..+. ..+.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 189 vgiKd---ssgd----~~~~~~l~~~~~~~~~~f~v~~G~D----~~~l~~l~~Ga~G~is~~a 241 (343)
T 2v9d_A 189 IGIKD---TIDS----VAHLRSMIHTVKGAHPHFTVLCGYD----DHLFNTLLLGGDGAISASG 241 (343)
T ss_dssp EEEEE---CCSC----HHHHHHHHHHHHHHCTTCEEEESSG----GGHHHHHHTTCCEECCGGG
T ss_pred EEEEe---CCCC----HHHHHHHHHhcCCCCCCEEEEECcH----HHHHHHHHCCCCEEEeCHH
Confidence 44311 1121 1122233333221 02455666643 3455666789999999875
No 278
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.85 E-value=0.1 Score=48.33 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=106.6
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+. |-+= ...-.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~---------GtTG-------E~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~ 93 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQ---------GSNG-------EFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCE 93 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEES---------SGGG-------TGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEC---------cccc-------chhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCC
Confidence 45667899999999999999999885 2110 00114556666777777654 368988865544
Q ss_pred chhccCHHHHHHHHHHcCCcEEEe--cCC-----ChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCC
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVV--PDV-----PLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASE 216 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGvii--pDl-----p~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~ 216 (311)
... ..-+..+.+.++|+|++++ |-. ..++..+ |...++..++..+++=.| +.+.+-+.++++ -.
T Consensus 94 ~t~--~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~p 170 (307)
T 3s5o_A 94 STQ--ATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ-HP 170 (307)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT-ST
T ss_pred CHH--HHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc-CC
Confidence 222 1235677889999999988 322 2344444 455566678877765433 234566666664 34
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC---CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS---TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~---~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.++.+=. .+| ++ ..+.++.+.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 171 nIvgiKd---ssg-------d~-~~~~~~~~~~~~~~f~v~~G~d----~~~l~~l~~G~~G~is~~a 223 (307)
T 3s5o_A 171 NIVGMXD---SGG-------DV-TRIGLIVHKTRKQDFQVLAGSA----GFLMASYALGAVGGVCALA 223 (307)
T ss_dssp TEEEEEE---CSC-------CH-HHHHHHHHHTTTSSCEEEESSG----GGHHHHHHHTCCEEECGGG
T ss_pred CEEEEEc---CCC-------CH-HHHHHHHHhccCCCeEEEeCcH----HHHHHHHHcCCCEEEechh
Confidence 5554421 112 12 2344443322 345555543 3566677799999998876
No 279
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.80 E-value=0.1 Score=48.38 Aligned_cols=176 Identities=14% Similarity=0.153 Sum_probs=103.4
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~------------Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 90 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGST----GEAFV------------QSLSEREQVLEIVAEEAKGKIKLIAHVGCV 90 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeec----cChhh------------CCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 55667889999999999999999884111 11211 3455555666665543 368998876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcC-CCeEEEeCC-----CChHHHHHHHHHhCCc
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNK-IELVLFTTP-----TTPTDRMKAIVEASEG 217 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~g-i~~I~lisp-----~t~~eri~~i~~~a~g 217 (311)
... ..-+..+.+.++|+||+++. - ...++..+ |...+...+ +.++++=.| +.+.+-+.++++ -..
T Consensus 91 ~t~--~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~-~pn 167 (303)
T 2wkj_A 91 STA--ESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT-LPG 167 (303)
T ss_dssp SHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT-STT
T ss_pred CHH--HHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc-CCC
Confidence 321 12356778899999999883 1 12245554 445555566 877765332 234566666654 344
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
++.+=. .+| ++ ..+.++++.. +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 168 IvgiK~---s~g-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~a 217 (303)
T 2wkj_A 168 VGALXQ---TSG-------DL-YQMEQIRREHPDLVLYNGYD----NIFASGLLAGADGGIGSTY 217 (303)
T ss_dssp EEEEEE---CCC-------CH-HHHHHHHHHCTTCEEEECCG----GGHHHHHHHTCCEEEETTH
T ss_pred EEEEeC---CCC-------CH-HHHHHHHHhCCCeEEEeCcH----HHHHHHHHCCCCEEEeCHH
Confidence 443311 111 11 2344443322 445555543 3466667789999999966
No 280
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.80 E-value=0.26 Score=46.25 Aligned_cols=204 Identities=15% Similarity=0.200 Sum_probs=127.7
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
..+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=-- .| .+ .. .| .+.+..
T Consensus 6 ~~~ll~~A~~~~-yAV~AfN---v~n~e~~~Ail~AAee~~sPvIlq~s-------~g-~~----~y---~g--~~~~~~ 64 (323)
T 2isw_A 6 LRQMLGEARKHK-YGVGAFN---VNNMEQIQGIMKAVVQLKSPVILQCS-------RG-AL----KY---SD--MIYLKK 64 (323)
T ss_dssp HHHHHHHHHHTT-CCEEEEE---CCSHHHHHHHHHHHHHTTCCEEEEEE-------HH-HH----HH---TT--THHHHH
T ss_pred HHHHHHHHHHCC-ceEEEEe---eCCHHHHHHHHHHHHHhCCCEEEECC-------hh-HH----Hh---CC--HHHHHH
Confidence 467777766554 4554454 45678999999999999998764321 12 00 00 12 122334
Q ss_pred HHHHhhcc-CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhh----HHHHHHHHHHcCCCeE----EE
Q 021527 130 MLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEE----TESLQKEAMKNKIELV----LF 198 (311)
Q Consensus 130 ~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee----~~~~~~~~~~~gi~~I----~l 198 (311)
+++...++ .++||.+-. -+..-.+.+..+.++|.+.+.+ ..+|+|| ..++.+.++++|+.+= .+
T Consensus 65 ~v~~aa~~~~~VPValHl-----DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~v 139 (323)
T 2isw_A 65 LCEAALEKHPDIPICIHL-----DHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTL 139 (323)
T ss_dssp HHHHHHHHCTTSCEEEEE-----EEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred HHHHHHHhcCCCcEEEEC-----CCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCc
Confidence 56555556 789998863 1222356788999999999988 4688887 6778888888876421 00
Q ss_pred e---------CCCChHHHHHHHHHhCCceEEE-E---ecCCccC--CCCC--CCchHHHHHHHHhhcCCCcEEE--ee--
Q 021527 199 T---------TPTTPTDRMKAIVEASEGFVYL-V---SSIGVTG--ARAS--ISGHVQTLLREIKESSTKPVAV--GF-- 257 (311)
Q Consensus 199 i---------sp~t~~eri~~i~~~a~gfiY~-v---s~~G~TG--~~~~--~~~~~~~~l~~vk~~~~~Pv~v--Gf-- 257 (311)
- .--|.++...+..+. .|.+.+ + +..|.+- .... ++. +.|+++++.+++|++. |.
T Consensus 140 gg~Ed~v~~~~~yTdPeea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~---~~L~~I~~~~~vpLVlHGgSsv 215 (323)
T 2isw_A 140 GGIEEDVQNTVQLTEPQDAKKFVEL-TGVDALAVAIGTSHGAYKFKSESDIRLAI---DRVKTISDLTGIPLVMHGSSSV 215 (323)
T ss_dssp ----------CCCCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCCCC----CCCC---HHHHHHHHHHCSCEEECSCCCC
T ss_pred cCCccCcccccccCCHHHHHHHHHH-HCCCEEEEecCccccccCCCCCcccccCH---HHHHHHHHHhCCCeEEECCCCC
Confidence 0 011444555555553 343344 2 3344332 1112 222 5688888888999877 44
Q ss_pred -------------------CCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 258 -------------------GISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 258 -------------------GIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+. .|++++..+.|.-=+=|+|.+-.
T Consensus 216 p~~~~~~~~~~gg~~~~~~Gvp-~e~i~~ai~~GV~KiNi~Tdl~~ 260 (323)
T 2isw_A 216 PKDVKDMINKYGGKMPDAVGVP-IESIVHAIGEGVCKINVDSDSRM 260 (323)
T ss_dssp CHHHHHHHHHTTCCCTTCBCCC-HHHHHHHHHTTEEEEEECHHHHH
T ss_pred CHHHHHHHHHhccccccCCCCC-HHHHHHHHHCCCeEEEEChHHHH
Confidence 776 69999999999888889887744
No 281
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=96.79 E-value=0.015 Score=53.97 Aligned_cols=121 Identities=20% Similarity=0.246 Sum_probs=70.2
Q ss_pred HHHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CCceEEEEecC
Q 021527 159 FMSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SEGFVYLVSSI 225 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~gfiY~vs~~ 225 (311)
-++.+.+.|||-|=+. ++. .+|...+++.|....+++|+-..--+.++ +...++. ..|..|+=+.+
T Consensus 131 Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~ee-i~~A~~ia~eaGADfVKTST 209 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADE-IIAGCVLSSLAGADYVKTST 209 (288)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHH-HHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHH-HHHHHHHHHHcCCCEEEcCC
Confidence 4567888999987542 321 12344455555443344443322223333 3333332 35777776666
Q ss_pred CccCCCCCCCchHHHHHHHHhh--cCCCcEEEeeCCCCHHHHHHHHHcCCc--EEEEhhHh
Q 021527 226 GVTGARASISGHVQTLLREIKE--SSTKPVAVGFGISKPEHVQQVAGWGAD--GVIVGSAM 282 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~--~~~~Pv~vGfGIst~e~v~~v~~~GAD--GvIVGSai 282 (311)
|.++. +...+..++++++.+ ..++||-+.+||++.+++.+++++||+ |.--|-+|
T Consensus 210 Gf~~~--GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g~~I 268 (288)
T 3oa3_A 210 GFNGP--GASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKI 268 (288)
T ss_dssp SSSSC--CCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHH
T ss_pred CCCCC--CCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhhHHHH
Confidence 65421 222222345666543 246999999999999999999999999 66333333
No 282
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.78 E-value=0.069 Score=53.09 Aligned_cols=67 Identities=22% Similarity=0.257 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.+|++.+.+..-.++-+.+.. +....+.+.++++|+.. ++||+ ..+|.+.++++.+.++|||+++||
T Consensus 258 ~era~aLveaGvd~I~Id~a~-------g~~~~v~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAH-------GHSQGVIDKVKEVRAKYPSLNII-AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSC-------TTSHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccceEEecccc-------cchhhhhhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHhCCCEEEEC
Confidence 466666666444444433322 12345678899999876 57885 457889999999999999999984
No 283
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=96.77 E-value=0.011 Score=54.12 Aligned_cols=122 Identities=19% Similarity=0.288 Sum_probs=77.0
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.| ...-...+.++|+.+|+-+.- +-++| ++...+.
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 156 (259)
T 2i9e_A 78 SPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGE-TLEEREAGKTEEVVFRQTKAIAAKVNDW 156 (259)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCC-cHHHHhcCCHHHHHHHHHHHHHhcchhh
Confidence 456789999999999631 1122 333455678899998877764 33433 2222211
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.+|+.. +++|+.|++|+. +++.+++ .-+.||+-||++
T Consensus 157 ~~~vIAYEPvWAIG-TG~~-Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgA 233 (259)
T 2i9e_A 157 SNVVIAYEPVWAIG-TGKT-ATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTA-ANCKELASQPDIDGFLVGGA 233 (259)
T ss_dssp TTEEEEECCGGGTT-SSSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCT-TTHHHHHTSTTCCEEEESGG
T ss_pred cCEEEEEcCHHHcC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCH-hhHHHHhcCCCCCeeeechH
Confidence 122344432 333 6743 44556667677777421 479999999984 6666655 567999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 234 sL~ 236 (259)
T 2i9e_A 234 SLK 236 (259)
T ss_dssp GGS
T ss_pred hhC
Confidence 887
No 284
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=96.77 E-value=0.048 Score=59.38 Aligned_cols=203 Identities=12% Similarity=0.067 Sum_probs=119.6
Q ss_pred HHHHHHHcCCccEEEEE-------eCCC--CChhhHHHHHHHHHHC--CCCEEEE-cCCCCCCCCChHHHHHHHHHHHHc
Q 021527 53 TFTRLKKQGKVALIPYI-------TAGD--PDLSTTAEALKLLDSC--GSDIIEL-GVPYSDPLADGPVIQAAATRSLAR 120 (311)
Q Consensus 53 ~f~~~~~~~~~~li~yi-------~~G~--P~~~~~~e~~~~L~~~--GaD~IEl-G~PfsDP~aDGp~Iq~a~~~Al~~ 120 (311)
.|.+..+..++..|.=. .++. -..++.+++++.|+++ |...||. | |.+++.. .+.+
T Consensus 522 ~~~~~~~~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~G---------ga~~e~~-~~~~-- 589 (1150)
T 3hbl_A 522 GVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWG---------GATFDVA-YNFL-- 589 (1150)
T ss_dssp HHHHHHTTCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEE---------TTHHHHH-HHTS--
T ss_pred HHHHHHHhCCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecC---------CceEEec-cccc--
Confidence 45554444455444322 2333 4567899999999998 8888887 4 3344332 1111
Q ss_pred CCCHHHHHHHHHHhhcc-CCCcEEEEecC-cch-----hccCHHHHHHHHHHcCCcEEEecCCCh--hhHHHHHHHHHHc
Q 021527 121 GTNFNAILSMLKEVVPQ-MSCPIALFTYY-NPI-----LKRGVDNFMSTVRDIGIRGLVVPDVPL--EETESLQKEAMKN 191 (311)
Q Consensus 121 G~~~~~~~~~i~~ir~~-~~iPiilm~Y~-n~i-----~~~g~~~fi~~~~~aGadGviipDlp~--ee~~~~~~~~~~~ 191 (311)
+-+- ++.++.+++. .++++..+.-. |.+ -....++|++.+.++|+|.+-+.|-.- .....+....++.
T Consensus 590 ~e~~---~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~ 666 (1150)
T 3hbl_A 590 KENP---WERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEA 666 (1150)
T ss_dssp CCCH---HHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHT
T ss_pred CCCH---HHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHH
Confidence 1111 3455555543 46676655411 211 111157899999999999998876432 3355667777888
Q ss_pred CCCeEEEeCCC-----------ChHHH----HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-
Q 021527 192 KIELVLFTTPT-----------TPTDR----MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV- 255 (311)
Q Consensus 192 gi~~I~lisp~-----------t~~er----i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v- 255 (311)
|......+.++ ++.+. .+++.+..-..+++....|. ..|..+.++++.+|+.+++||-+
T Consensus 667 g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~-----~~P~~~~~lv~~l~~~~~~~i~~H 741 (1150)
T 3hbl_A 667 GKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGL-----LKPKAAYELIGELKSAVDLPIHLH 741 (1150)
T ss_dssp TCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCC-----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred hhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCC-----CCHHHHHHHHHHHHHhcCCeEEEE
Confidence 85443333332 22333 33333333445666665543 34667889999999988888876
Q ss_pred ---eeCCCCHHHHHHHHHcCCcEE
Q 021527 256 ---GFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 256 ---GfGIst~e~v~~v~~~GADGv 276 (311)
.+|... .+....+++|||.|
T Consensus 742 ~Hnt~G~a~-An~laA~~aGa~~v 764 (1150)
T 3hbl_A 742 THDTSGNGL-LTYKQAIDAGVDII 764 (1150)
T ss_dssp ECBTTSCHH-HHHHHHHHTTCSEE
T ss_pred eCCCCcHHH-HHHHHHHHhCCCEE
Confidence 345543 45667778999876
No 285
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.76 E-value=0.027 Score=52.96 Aligned_cols=135 Identities=11% Similarity=0.109 Sum_probs=93.2
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
.+-.|-+.|..+.+.+.+.++.+.+.|.+.+++-+- .+ +.+...+.++.+|+.+ ++|
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g------~~---------------~~~~~~e~v~avr~a~g~~~~ 191 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIG------YP---------------ALDQDLAVVRSIRQAVGDDFG 191 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECC------CS---------------SHHHHHHHHHHHHHHHCSSSE
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecC------CC---------------CHHHHHHHHHHHHHHhCCCCE
Confidence 344565666667788999999999999999998421 11 2334456778887754 677
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 192 l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--~P-------------------- 223 (359)
T 1mdl_A 192 IMVDY--NQ------------------------SLDVPAAIKRSQALQQEGVTWIE--EP-------------------- 223 (359)
T ss_dssp EEEEC--TT------------------------CSCHHHHHHHHHHHHHHTCSCEE--CC--------------------
T ss_pred EEEEC--CC------------------------CCCHHHHHHHHHHHHHhCCCeEE--CC--------------------
Confidence 76642 21 11236676777777888876441 11
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.++++|+.+++||+.+-.+.++++++++++.| +|++.+.
T Consensus 224 ------------~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 224 ------------TLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp ------------SCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred ------------CChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 111224568889888999999999999999999998776 7998774
No 286
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.75 E-value=0.11 Score=47.39 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=119.4
Q ss_pred EEEeCCC---CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEE
Q 021527 67 PYITAGD---PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIA 143 (311)
Q Consensus 67 ~yi~~G~---P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPii 143 (311)
+|+.+|- -|.+...+.++.+.++|+|++-++.. +|-.. |. -..|.. ++-++.+++++++.++|++
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~f--kprts-~~--------~~~g~~-~egl~~l~~~~~~~Gl~~~ 91 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAF--KPRTS-PY--------SFQGYG-EKALRWMREAADEYGLVTV 91 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSS--CCCSS-TT--------SCCCCT-HHHHHHHHHHHHHHTCEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEec--ccCCC-cc--------cccCcc-HHHHHHHHHHHHHcCCcEE
Confidence 5665543 13578999999999999999998853 33211 00 001222 5567888888888999988
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCC-hHHHHHHHHH----hCCce
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTT-PTDRMKAIVE----ASEGF 218 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t-~~eri~~i~~----~a~gf 218 (311)
--.+ ++ . -++.+.+. +|.+-|+--..+.. .+..++.+.|.. |.+-+... +.+.+...++ ....-
T Consensus 92 te~~-d~---~----~~~~l~~~-vd~~kIga~~~~n~-~ll~~~a~~~kP-V~lk~G~~~t~~e~~~Av~~i~~~Gn~~ 160 (262)
T 1zco_A 92 TEVM-DT---R----HVELVAKY-SDILQIGARNSQNF-ELLKEVGKVENP-VLLKRGMGNTIQELLYSAEYIMAQGNEN 160 (262)
T ss_dssp EECC-CG---G----GHHHHHHH-CSEEEECGGGTTCH-HHHHHHTTSSSC-EEEECCTTCCHHHHHHHHHHHHTTTCCC
T ss_pred EeeC-CH---H----hHHHHHhh-CCEEEECcccccCH-HHHHHHHhcCCc-EEEecCCCCCHHHHHHHHHHHHHCCCCe
Confidence 7432 21 1 23444455 88888874333333 344455557754 55555553 3333222222 12223
Q ss_pred EEEEecCCc---cCCCCCCCchHHHHHHHHhhcCCCcEEEe----eCCCC--HHHHHHHHHcCCcEEEEhhHhh--chhh
Q 021527 219 VYLVSSIGV---TGARASISGHVQTLLREIKESSTKPVAVG----FGISK--PEHVQQVAGWGADGVIVGSAMV--KLLG 287 (311)
Q Consensus 219 iY~vs~~G~---TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG----fGIst--~e~v~~v~~~GADGvIVGSaiv--~~~~ 287 (311)
+.+.-+ |. ++.. ....+ ...+..+|+.+++||++. .|.+. +.-+......||||++|=+.+. +.+.
T Consensus 161 i~L~~R-G~~~~~~y~-~~~v~-L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~ 237 (262)
T 1zco_A 161 VILCER-GIRTFETAT-RFTLD-ISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALS 237 (262)
T ss_dssp EEEEEC-CBCCSCCSS-SSBCC-TTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSS
T ss_pred EEEEEC-CCCCCCCcC-hhhcC-HHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCC
Confidence 333222 31 2221 11112 245777888788998663 23321 1335556789999999987753 2222
Q ss_pred hcCCchhHHHHHHHHHHHHHhh
Q 021527 288 EAQSPEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~ 309 (311)
++. ..-..+++++++++++..
T Consensus 238 D~~-~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 238 DSQ-QQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp CTT-TCBCHHHHHHHHHHHHHT
T ss_pred hhh-cCCCHHHHHHHHHHHHHH
Confidence 221 111256788888888753
No 287
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.75 E-value=0.036 Score=51.72 Aligned_cols=176 Identities=10% Similarity=0.047 Sum_probs=103.8
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|++.+.+.++.+.++|+|.|-+.---. +++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG----E~~------------~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~ 91 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTS----EFY------------ALSLEEAKEEVRRTVEYVHGRALVVAGIGYA 91 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGG----TGG------------GSCHHHHHHHHHHHHHHHTTSSEEEEEECSS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCcccc----Ccc------------cCCHHHHHHHHHHHHHHhCCCCcEEEEeCcC
Confidence 456678999999999999999998851110 111 13555556666666543 368988875323
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--CC---ChhhHHH-HHHHHHHcCCCeEEEe-CCCChHHHHHHHHHhCCceEEEE
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--DV---PLEETES-LQKEAMKNKIELVLFT-TPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--Dl---p~ee~~~-~~~~~~~~gi~~I~li-sp~t~~eri~~i~~~a~gfiY~v 222 (311)
+- ..-+..+.+.++|+|++++. -. ..++..+ |...+...++.++++= .+..+.+-+.++++ -..++.+=
T Consensus 92 t~---~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~-~pnIvgiK 167 (316)
T 3e96_A 92 TS---TAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAP-LQNLVGVK 167 (316)
T ss_dssp HH---HHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTT-CTTEEEEE
T ss_pred HH---HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHc-CCCEEEEE
Confidence 21 22457778899999999983 21 2245544 5555666788776653 44455566666653 34454431
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCC---Cc-EEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESST---KP-VAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~---~P-v~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
. .+| ++ ..+.++.+.++ .- ++.|..-. .+...+..|++|+|-|++
T Consensus 168 d---ssg-------d~-~~~~~~~~~~~~~~f~~v~~G~d~~---~~~~~l~~G~~G~is~~a 216 (316)
T 3e96_A 168 Y---AIN-------DL-PRFAKVVRSIPEEHQIAWICGTAEK---WAPFFWHAGAKGFTSGLV 216 (316)
T ss_dssp E---CCC-------CH-HHHHHHHTTSCGGGCCEEEETTCTT---THHHHHHHTCCEEEESGG
T ss_pred e---CCC-------CH-HHHHHHHHhcCCCCceEEEeCChHH---HHHHHHHCCCCEEEechh
Confidence 1 111 12 23555555442 33 55554321 244456689999999876
No 288
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=96.74 E-value=0.02 Score=50.99 Aligned_cols=120 Identities=18% Similarity=0.192 Sum_probs=68.8
Q ss_pred HHHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhC--CceEEEEecC
Q 021527 159 FMSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEAS--EGFVYLVSSI 225 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a--~gfiY~vs~~ 225 (311)
-++.+.+.|+|.|-+. ++. .+|...+++.|.+.++++|+-...-+ ++.+...++.+ .|..|+=+.+
T Consensus 76 e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~-~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 76 EAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFS-PEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSC-HHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHHhCCCEEEeCC
Confidence 4567888999987552 222 12344455555444444443222223 34344444432 4666776666
Q ss_pred CccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCc--EEEEhhHh
Q 021527 226 GVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGAD--GVIVGSAM 282 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GAD--GvIVGSai 282 (311)
|.+.. +...+..+.++++- ..++||-+.+||++.+++.++.++||+ |+-.|-.|
T Consensus 155 Gf~~~--gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I 210 (220)
T 1ub3_A 155 GFGPR--GASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVAL 210 (220)
T ss_dssp SSSSC--CCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHH
T ss_pred CCCCC--CCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHH
Confidence 65421 11222222333322 346899999999999999999999999 77333333
No 289
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=96.74 E-value=0.0055 Score=55.90 Aligned_cols=122 Identities=19% Similarity=0.350 Sum_probs=76.3
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++| ++.....
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 159 (255)
T 3qst_A 81 TVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGE-HLSEREAGKASEFVSAQIEKMIPAIPAG 159 (255)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHGGGSCTT
T ss_pred CHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCC-cHHHHHcCCHHHHHHHHHHHHHccCCHH
Confidence 456789999999999731 11233333 56778899998887764 44555 2333211
Q ss_pred --CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 215 --SEGFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 215 --a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
..-.|-|.+ ..| ||.. ..+....+..+.+|+.. +++|++|++|+ ++++.+++ .-+.||+-||
T Consensus 160 ~~~~~vIAYEPvWAIG-TG~~-Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 236 (255)
T 3qst_A 160 KWDDVVIAYEPIWAIG-TGKV-ASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVK-PNNCNELAACPDVDGFLVG 236 (255)
T ss_dssp CGGGEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCC-TTTHHHHHHSTTCCEEEEC
T ss_pred HhCCEEEEECCHHHhc-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcC-HhHHHHHhcCCCCCEEEee
Confidence 112333332 233 5542 33455666666666541 47999999998 56776655 5679999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
+|-.+
T Consensus 237 gASL~ 241 (255)
T 3qst_A 237 GASLE 241 (255)
T ss_dssp GGGGS
T ss_pred HHHhh
Confidence 98776
No 290
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.74 E-value=0.08 Score=50.95 Aligned_cols=204 Identities=15% Similarity=0.193 Sum_probs=116.4
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEcCC--CCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELGVP--YSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG~P--fsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
=+.+...+.++.+.++|+|+|=++.- -+.|+. -.|... +-+..+++++++.++|++--.+ +
T Consensus 153 es~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~-------------f~gl~~-egl~~L~~~~~~~Gl~~~te~~-d-- 215 (385)
T 3nvt_A 153 ESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYD-------------FQGLGL-EGLKILKRVSDEYGLGVISEIV-T-- 215 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTS-------------CCCCTH-HHHHHHHHHHHHHTCEEEEECC-S--
T ss_pred CCHHHHHHHHHHHHHcCCCeEEcccccCCCChHh-------------hcCCCH-HHHHHHHHHHHHcCCEEEEecC-C--
Confidence 37789999999999999999998852 122220 013444 4567888888889999887432 2
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC-ChHHHHHHHHH----hC-CceEEEEecC
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT-TPTDRMKAIVE----AS-EGFVYLVSSI 225 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~-t~~eri~~i~~----~a-~gfiY~vs~~ 225 (311)
. .-++.+.+. +|.+-|+--.... ..+...+.+.|.. |.+-+.. .+.+.+...++ .. ..++.|- .
T Consensus 216 -~----~~~~~l~~~-vd~lkIgs~~~~n-~~LL~~~a~~gkP-Vilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~--r 285 (385)
T 3nvt_A 216 -P----ADIEVALDY-VDVIQIGARNMQN-FELLKAAGRVDKP-ILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE--R 285 (385)
T ss_dssp -G----GGHHHHTTT-CSEEEECGGGTTC-HHHHHHHHTSSSC-EEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE--C
T ss_pred -H----HHHHHHHhh-CCEEEECcccccC-HHHHHHHHccCCc-EEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE--C
Confidence 1 123344455 8988887332223 3466677788864 5555544 33333322222 22 2344443 2
Q ss_pred CccCC----CCCCCchHHHHHHHHhhcCCCcEEEe--eCCCCH----HHHHHHHHcCCcEEEEhhHhh--chhhhcCCch
Q 021527 226 GVTGA----RASISGHVQTLLREIKESSTKPVAVG--FGISKP----EHVQQVAGWGADGVIVGSAMV--KLLGEAQSPE 293 (311)
Q Consensus 226 G~TG~----~~~~~~~~~~~l~~vk~~~~~Pv~vG--fGIst~----e~v~~v~~~GADGvIVGSaiv--~~~~~~~~~~ 293 (311)
|++.. ...++ + ..+..+|+.+++||+++ -|+... .-.......||||++|=.-+. +.+.++.. .
T Consensus 286 G~s~yp~~~~~~ld--l-~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~-s 361 (385)
T 3nvt_A 286 GIRTYEKATRNTLD--I-SAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQ-Q 361 (385)
T ss_dssp CBCCSCCSSSSBCC--T-THHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTT-S
T ss_pred CCCCCCCCCccccC--H-HHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccc-c
Confidence 33322 22222 2 34777888789999765 222111 224456679999999976433 22222111 1
Q ss_pred hHHHHHHHHHHHHHh
Q 021527 294 EGLKELEKFAKSLKS 308 (311)
Q Consensus 294 ~~~~~~~~~~~~l~~ 308 (311)
-..+++++++++++.
T Consensus 362 l~p~el~~lv~~i~~ 376 (385)
T 3nvt_A 362 MDIPEFEEFWNAILA 376 (385)
T ss_dssp BCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 125677777777765
No 291
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.73 E-value=0.18 Score=46.31 Aligned_cols=176 Identities=11% Similarity=0.116 Sum_probs=104.0
Q ss_pred CCCChhhHHHHHHHHHH-CCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecC
Q 021527 72 GDPDLSTTAEALKLLDS-CGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYY 148 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~-~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~ 148 (311)
|.-|.+.+.+.++.+.+ +|+|.|-+.---. ++ .-.+.++-.++++.+.+. -++||+.-+-.
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttG----E~------------~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 82 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTG----EN------------FMLSTEEKKEIFRIAKDEAKDQIALIAQVGS 82 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGG----TG------------GGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCcccc----ch------------hhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 55677899999999999 9999998841110 11 113555555666665543 36899887655
Q ss_pred cchhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCc
Q 021527 149 NPILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEG 217 (311)
Q Consensus 149 n~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~g 217 (311)
|... ..-+..+.+.++|+|++++. - ...++..+ |...++..++..+++=.| ..+.+-+.++++ -..
T Consensus 83 ~~t~--~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pn 159 (293)
T 1f6k_A 83 VNLK--EAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK-NPK 159 (293)
T ss_dssp SCHH--HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT-STT
T ss_pred CCHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc-CCC
Confidence 4322 12356777889999999883 1 12244444 455566678876655322 234566666654 344
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
++.+=. .+| ++ ..+.++++.. +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 160 IvgiK~---s~g-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 209 (293)
T 1f6k_A 160 VLGVKF---TAG-------DF-YLLERLKKAYPNHLIWAGFD----EMMLPAASLGVDGAIGSTF 209 (293)
T ss_dssp EEEEEE---CSC-------CH-HHHHHHHHHCTTSEEEECCG----GGHHHHHHTTCSEEEESTH
T ss_pred EEEEEE---CCC-------CH-HHHHHHHHhCCCeEEEECcH----HHHHHHHHCCCcEEEeCHH
Confidence 543311 111 11 2344444332 444555543 3566677799999999975
No 292
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.72 E-value=0.012 Score=54.22 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=40.9
Q ss_pred HHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 240 TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 240 ~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+.++.+|+.+++||+...+|.++.|+.++..+|||+|.++.+...
T Consensus 110 ~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 110 EFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp HHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSC
T ss_pred HHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccC
Confidence 578999999999999998899999999999999999999988653
No 293
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.69 E-value=0.051 Score=50.05 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=102.8
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+. -++||+.-+-.|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~ 80 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTT----GESAT------------LNHDEHADVVMMTLDLADGRIPVIAGTGAN 80 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cchhh------------CCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 55677899999999999999999884111 11211 3445555566655543 368988876544
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHHH-HHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETESL-QKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~~-~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+||+++. - ...++..++ ...+...++..+++=.| +.+.+-+.++++ -..+
T Consensus 81 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pni 157 (292)
T 2ojp_A 81 ATA--EAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNI 157 (292)
T ss_dssp SHH--HHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT-STTE
T ss_pred cHH--HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc-CCCE
Confidence 221 12346667788999999883 1 122455544 45555567776655322 234465666654 2344
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+ .-.+| ++ ..+.++++.+ +..|+.|.. +.+-..+..|+||+|-|++
T Consensus 158 vgi---K~s~g-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~ 207 (292)
T 2ojp_A 158 IGI---XEATG-------NL-TRVNQIKELVSDDFVLLSGDD----ASALDFMQYGGHGVISVTA 207 (292)
T ss_dssp EEC----CCSC-------CT-HHHHHHHTTSCTTSBCEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEE---eCCCC-------CH-HHHHHHHHhcCCCEEEEECcH----HHHHHHHHCCCcEEEeCHH
Confidence 322 11111 12 3455555544 455666654 3455566799999999876
No 294
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.56 E-value=0.044 Score=52.63 Aligned_cols=44 Identities=27% Similarity=0.376 Sum_probs=37.1
Q ss_pred CchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 235 SGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 235 ~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
+....+.++++|+.+ ++||++| ++.++++++.+.++|+|+++||
T Consensus 178 ~~~~~e~i~~ir~~~~~~pviv~-~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 178 STRIIELIKKIKTKYPNLDLIAG-NIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHTTTCSEEEEC
T ss_pred hHHHHHHHHHHHHHCCCCeEEEc-CCCcHHHHHHHHhcCCCEEEEC
Confidence 345678899999988 8999885 4567999999999999999994
No 295
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=96.47 E-value=0.027 Score=57.61 Aligned_cols=172 Identities=12% Similarity=0.138 Sum_probs=93.9
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC----CCcEEEEecCcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM----SCPIALFTYYNP 150 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~----~iPiilm~Y~n~ 150 (311)
+.++-+++++.|++.|+|.||+|+|-+.| + =++.++++.+.. ++-+..++-..
T Consensus 91 s~eeKl~Ia~~L~~lGVd~IEaGfP~asp---~-------------------D~e~v~~i~~~~l~~~~~~i~aL~r~~- 147 (644)
T 3hq1_A 91 SPARKRRMFDLLVRMGYKEIEVGFPSASQ---T-------------------DFDFVREIIEQGAIPDDVTIQVLTQCR- 147 (644)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTTCH---H-------------------HHHHHHHHHHTTCSCTTCEEEEEEESC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCh---h-------------------HHHHHHHHHhcCCCCCCeEEEEEecCC-
Confidence 35788999999999999999999988765 1 123555554431 34455554321
Q ss_pred hhccCHHHHHHHHHHcCCcEEEec------------CCChhhHHH----HHHHHHHcCCC-----eEEEeCC----CChH
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVP------------DVPLEETES----LQKEAMKNKIE-----LVLFTTP----TTPT 205 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviip------------Dlp~ee~~~----~~~~~~~~gi~-----~I~lisp----~t~~ 205 (311)
...+++-++.++.+|.+.|.+. ....||..+ ..+.+++++-+ .-+-.++ .++.
T Consensus 148 --~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~ 225 (644)
T 3hq1_A 148 --PELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTEL 225 (644)
T ss_dssp --HHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCH
T ss_pred --HhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCH
Confidence 1113444555566787777662 233444322 22223333211 1122233 2445
Q ss_pred HHHHHHHHhC-----Cc-----eEEEEecCCccCCCCCCCchHHHHHHHHhhcCC----CcEEE----eeCCCCHHHHHH
Q 021527 206 DRMKAIVEAS-----EG-----FVYLVSSIGVTGARASISGHVQTLLREIKESST----KPVAV----GFGISKPEHVQQ 267 (311)
Q Consensus 206 eri~~i~~~a-----~g-----fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~----~Pv~v----GfGIst~e~v~~ 267 (311)
+.+.++++.. .| .+++....|. ..|..+.++++.+++... +|+-+ .+|... .+...
T Consensus 226 dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~-----~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAv-ANsla 299 (644)
T 3hq1_A 226 EYAKQVCDAVGEVIAPTPERPIIFNLPATVEM-----TTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAV-AAAEL 299 (644)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCEEEEEEESSCC-----SCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHH-HHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceeEEEecCCCcc-----cCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHH-HHHHH
Confidence 6554444431 12 3555554443 345667788888887652 34433 345543 34556
Q ss_pred HHHcCCcEEE
Q 021527 268 VAGWGADGVI 277 (311)
Q Consensus 268 v~~~GADGvI 277 (311)
.+++||+-|=
T Consensus 300 Av~AGA~~Vd 309 (644)
T 3hq1_A 300 GFAAGADRIE 309 (644)
T ss_dssp HHHTTCCEEE
T ss_pred HHHhCCCEEE
Confidence 6779999774
No 296
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=96.47 E-value=0.012 Score=53.42 Aligned_cols=122 Identities=19% Similarity=0.299 Sum_probs=73.8
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++| ++.....
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 157 (249)
T 3th6_A 79 SPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACIGE-LLEDREAGRTEEVCFRQIKHIASNVKDW 157 (249)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHTTTCHHHHHHHHHHHHHTTCSCG
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhcCCHHHHHHHHHHHHHhchhhh
Confidence 456789999999999731 12233333 46778899998887764 43444 2222211
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..+....+..+.+|+. . +++|++|++|+ ++++.+++ ..+.||+-||+|
T Consensus 158 ~~~vIAYEPvWAIG-TG~~-At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGgA 234 (249)
T 3th6_A 158 SKVVIAYEPVWAIG-TGKT-ATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVN-AGNCKELGRKPDIDGFLVGGA 234 (249)
T ss_dssp GGEEEEECCTTTCC-C----CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCC-TTTHHHHHTSTTCCEEEECGG
T ss_pred cCEEEEECCcchhc-CCCC-CCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccC-HhHHHHHhcCCCCCEEEeehH
Confidence 112333332 223 5542 3344556666666652 1 37999999998 46666655 567999999998
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 235 SL~ 237 (249)
T 3th6_A 235 SLK 237 (249)
T ss_dssp GGS
T ss_pred hhh
Confidence 776
No 297
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=96.47 E-value=0.077 Score=50.35 Aligned_cols=133 Identities=9% Similarity=0.086 Sum_probs=92.3
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
..+-.|.+.|..+.+.+.+.++.+.+.|.|.+++-+-. +++...+.++.+|+.+ ++
T Consensus 133 ~~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------------~~~~~~e~v~avr~a~g~d~ 190 (379)
T 2rdx_A 133 DGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------------DWQSDIDRIRACLPLLEPGE 190 (379)
T ss_dssp SSEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------------CHHHHHHHHHHHGGGSCTTC
T ss_pred CceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------------CHHHHHHHHHHHHHhcCCCC
Confidence 34555777776677889999999999999999994211 2344567888998875 57
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
|+.+-. |. -+..+++.++.+.+.++|+ .+- .
T Consensus 191 ~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i-~iE--~-------------------- 221 (379)
T 2rdx_A 191 KAMADA--NQ------------------------GWRVDNAIRLARATRDLDY-ILE--Q-------------------- 221 (379)
T ss_dssp EEEEEC--TT------------------------CSCHHHHHHHHHHTTTSCC-EEE--C--------------------
T ss_pred EEEEEC--CC------------------------CCCHHHHHHHHHHHHhCCe-EEe--C--------------------
Confidence 776632 21 1123556566666666665 330 0
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
.++ ..+.++++|+.+++||+.+..+.++++++++++.| +|.|.+.-
T Consensus 222 ------------P~~--~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 222 ------------PCR--SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp ------------CSS--SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred ------------CcC--CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 111 13568889998999999999999999999998765 89998843
No 298
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=96.45 E-value=0.008 Score=54.59 Aligned_cols=122 Identities=20% Similarity=0.294 Sum_probs=76.0
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.| ...-...+.++|+.+|+-+.- +-++| ++...+.
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 156 (247)
T 1ney_A 78 SVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGE-TLEEKKAGKTLDVVERQLNAVLEEVKDF 156 (247)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHHCCCHHHHHHHHHHHHHhchhhh
Confidence 456789999999999631 1122 222445678899988876654 44555 1111111
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.+|+. -+++|+.|++|+. +++.+++ ..+.||+-||++
T Consensus 157 ~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgA 233 (247)
T 1ney_A 157 TNVVVAYEPVXAIG-TGLA-ATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANG-SNAVTFKDKADVDGFLVGGA 233 (247)
T ss_dssp TTEEEEECCGGGTT-TSCC-CCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCT-TTGGGGTTCTTCCEEEESGG
T ss_pred cCEEEEECChhhcC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCH-hHHHHHHcCCCCCeeEeehH
Confidence 122344433 333 6643 4455666666667762 1489999999985 6665554 567999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 234 sL~ 236 (247)
T 1ney_A 234 SLK 236 (247)
T ss_dssp GGS
T ss_pred HHH
Confidence 887
No 299
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=96.41 E-value=0.056 Score=51.66 Aligned_cols=135 Identities=13% Similarity=0.151 Sum_probs=93.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
..+-.|.+.|..+.+.+.+.++.+.+.|.+.+++-+- .+++..++.++.+|+.+ ++
T Consensus 133 ~~vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g----------------------~~~~~~~e~v~avR~a~g~d~ 190 (397)
T 2qde_A 133 ERIPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAG----------------------GPLKADIAMVAEVRRAVGDDV 190 (397)
T ss_dssp SSEEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECC----------------------SCHHHHHHHHHHHHHHHCTTS
T ss_pred CCcceEEECCCCCHHHHHHHHHHHHHhhhhheeeccc----------------------CCHHHHHHHHHHHHHhhCCCC
Confidence 3455577777667788899999999999999998421 12334456777777653 67
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 191 ~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP------------------- 223 (397)
T 2qde_A 191 DLFIDI--NG------------------------AWTYDQALTTIRALEKYNLSKIE--QP------------------- 223 (397)
T ss_dssp CEEEEC--TT------------------------CCCHHHHHHHHHHHGGGCCSCEE--CC-------------------
T ss_pred EEEEEC--CC------------------------CCCHHHHHHHHHHHHhCCCCEEE--CC-------------------
Confidence 776642 21 11346666777777777776431 11
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+-
T Consensus 224 -------------~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 270 (397)
T 2qde_A 224 -------------LPAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIK 270 (397)
T ss_dssp -------------SCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred -------------CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 112224568888888899999999999999999998655 7999884
No 300
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.38 E-value=0.24 Score=45.46 Aligned_cols=205 Identities=19% Similarity=0.217 Sum_probs=114.6
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCC--CCCC-CChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPY--SDPL-ADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~Pf--sDP~-aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
+.+...+.++.+.++|+|.+=+++-- +.|+ ..| .. ++-++++++++++.++|++--.+ ++
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g--------------~g-~~gl~~l~~~~~~~Gl~~~te~~-d~- 112 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQG--------------LG-LEGLKLLRRAGDEAGLPVVTEVL-DP- 112 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCC--------------CT-HHHHHHHHHHHHHHTCCEEEECC-CG-
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcC--------------CC-HHHHHHHHHHHHHcCCcEEEecC-CH-
Confidence 45789999999999999998776433 2221 122 21 46678889999899999877432 21
Q ss_pred hccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCC-hHHHHHH----HHHhCC-ceEEEEecC
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTT-PTDRMKA----IVEASE-GFVYLVSSI 225 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t-~~eri~~----i~~~a~-gfiY~vs~~ 225 (311)
.-++.+.+. +|.+-|+--..+... +.+++.+.|. +|.+-+..+ +.+.+.. +..... .++.+- .
T Consensus 113 ------~~~~~l~~~-vd~~kIgs~~~~n~~-ll~~~a~~~k-PV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~--R 181 (276)
T 1vs1_A 113 ------RHVETVSRY-ADMLQIGARNMQNFP-LLREVGRSGK-PVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE--R 181 (276)
T ss_dssp ------GGHHHHHHH-CSEEEECGGGTTCHH-HHHHHHHHTC-CEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE--C
T ss_pred ------HHHHHHHHh-CCeEEECcccccCHH-HHHHHHccCC-eEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe--C
Confidence 123334445 788888743333333 4555556675 455666554 3333322 222222 344432 1
Q ss_pred CccCCC--CCCCchHHHHHHHHhhcCCCcEEE----eeCCCC--HHHHHHHHHcCCcEEEEhhHhhc--hhhhcCCchhH
Q 021527 226 GVTGAR--ASISGHVQTLLREIKESSTKPVAV----GFGISK--PEHVQQVAGWGADGVIVGSAMVK--LLGEAQSPEEG 295 (311)
Q Consensus 226 G~TG~~--~~~~~~~~~~l~~vk~~~~~Pv~v----GfGIst--~e~v~~v~~~GADGvIVGSaiv~--~~~~~~~~~~~ 295 (311)
|++... .....+ ...+..+|+.+++||++ +.|.+. +.-.......||||++|=+.+.- .+.++. ..-.
T Consensus 182 g~~~yp~y~~~~vd-l~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~-~sl~ 259 (276)
T 1vs1_A 182 GIRTFEPSTRFTLD-VAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAK-QQLT 259 (276)
T ss_dssp CBCCSCCSSSSBCB-HHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGG-GCBC
T ss_pred CcCCCCCcCcchhC-HHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchh-cCCC
Confidence 332211 111122 24477788878899754 124321 23334445689999999876522 222211 1112
Q ss_pred HHHHHHHHHHHHhh
Q 021527 296 LKELEKFAKSLKSA 309 (311)
Q Consensus 296 ~~~~~~~~~~l~~~ 309 (311)
.+++++++++++..
T Consensus 260 p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 260 PGEFARLMGELRWH 273 (276)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 67788888888753
No 301
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=96.34 E-value=0.016 Score=52.71 Aligned_cols=122 Identities=19% Similarity=0.226 Sum_probs=75.4
Q ss_pred HHHHHHHcCCcEEEecCCC----hhh----HHHHHHHHHHcCCCeEEEeCCCChHHH------------HHHHHHhC---
Q 021527 159 FMSTVRDIGIRGLVVPDVP----LEE----TESLQKEAMKNKIELVLFTTPTTPTDR------------MKAIVEAS--- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp----~ee----~~~~~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~a--- 215 (311)
-...+++.|++.+|+..-- +.| ..+-...+.++|+.+|+-+.- +-++| ++...+.-
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 158 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGE-TLQQREANQTAKVVLSQTSAIAAKLTKD 158 (251)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHTTCCTG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 4567899999999996310 112 222445678899988876654 44555 11111111
Q ss_pred ---CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 216 ---EGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 216 ---~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+. . +++|+.|++|+. +++.+++ .-+.||+-||
T Consensus 159 ~~~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVG 235 (251)
T 2vxn_A 159 AWNQVVLAYEPVWAIG-TGKV-ATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNA-ANAATLYAKPDINGFLVG 235 (251)
T ss_dssp GGGGEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCT-TTHHHHHTSTTCCEEEES
T ss_pred HhCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCH-hHHHHHhcCCCCCeeeec
Confidence 12333332 333 6643 4455666766667742 1 379999999984 6666655 5679999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 236 gAsL~ 240 (251)
T 2vxn_A 236 GASLK 240 (251)
T ss_dssp GGGGS
T ss_pred HHHHH
Confidence 99887
No 302
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=96.34 E-value=0.041 Score=52.47 Aligned_cols=135 Identities=13% Similarity=0.056 Sum_probs=93.0
Q ss_pred ccEEEEEeCC-CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--C
Q 021527 63 VALIPYITAG-DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--S 139 (311)
Q Consensus 63 ~~li~yi~~G-~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~ 139 (311)
..+-.|.+.| ..+.+.+.+.++.+.+.|.+.+++-+ | +-+.+. .+.++.+|+.+ +
T Consensus 151 ~~vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~--------g-------------~~~~~~-~e~v~avr~a~g~d 208 (388)
T 2nql_A 151 DSFPAYVSGLPERTLKARGELAKYWQDRGFNAFKFAT--------P-------------VADDGP-AAEIANLRQVLGPQ 208 (388)
T ss_dssp SEEEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEG--------G-------------GCTTCH-HHHHHHHHHHHCTT
T ss_pred CceEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeC--------C-------------CCChHH-HHHHHHHHHHhCCC
Confidence 3455576766 46778899999999999999999841 1 012334 56777777753 6
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+|+.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 209 ~~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP------------------ 242 (388)
T 2nql_A 209 AKIAADM--HW------------------------NQTPERALELIAEMQPFDPWFAE--AP------------------ 242 (388)
T ss_dssp SEEEEEC--CS------------------------CSCHHHHHHHHHHHGGGCCSCEE--CC------------------
T ss_pred CEEEEEC--CC------------------------CCCHHHHHHHHHHHhhcCCCEEE--CC------------------
Confidence 7777642 21 11236666777777777776441 11
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
+++...+.++++|+.+++||+.+-.+.++++++++++.| +|.|.+-
T Consensus 243 --------------~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 243 --------------VWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp --------------SCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred --------------CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 111224568889998999999999999999999999766 7998773
No 303
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=96.34 E-value=0.054 Score=49.82 Aligned_cols=122 Identities=14% Similarity=0.242 Sum_probs=73.3
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH---------HHHHHhCC-----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM---------KAIVEASE----- 216 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri---------~~i~~~a~----- 216 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- |-++|- ..+...-.
T Consensus 104 S~~mLkd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGE-tleeRe~g~t~~vv~~Ql~~~l~~~~~~ 182 (275)
T 3kxq_A 104 SAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGE-TLEERKSNKVLDVLTRQLEGSLPDGATA 182 (275)
T ss_dssp CHHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHSCTTCCT
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHCCCHHHHHHHHHHHHHcCCccc
Confidence 456789999999999731 01232333 36678899998887764 444541 11211111
Q ss_pred --ceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC---------CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHh
Q 021527 217 --GFVYLVS--SIGVTGARASISGHVQTLLREIKESS---------TKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAM 282 (311)
Q Consensus 217 --gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~---------~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSai 282 (311)
-.|-|.+ ..| ||.. ..+....+..+.||+.. +++|+.|+.++ |+|+++++.. ..||+.||.|=
T Consensus 183 ~~vVIAYEPVWAIG-TGkt-At~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV~-~~Na~el~~~~dIDG~LVGgAS 259 (275)
T 3kxq_A 183 ENIIIAYEPVWAVG-TGNT-ATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVK-PSNAFELLSTAHVNGALIGGAS 259 (275)
T ss_dssp TTEEEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCC-TTTHHHHHTSTTCCEEEESGGG
T ss_pred CCEEEEECChhhhc-CCCC-CCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCcC-HhHHHHHHcCCccceEEeehhh
Confidence 1333322 222 5543 33555666666666542 58999999997 7999999844 48999999887
Q ss_pred hc
Q 021527 283 VK 284 (311)
Q Consensus 283 v~ 284 (311)
.+
T Consensus 260 L~ 261 (275)
T 3kxq_A 260 LK 261 (275)
T ss_dssp SS
T ss_pred cC
Confidence 66
No 304
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=96.32 E-value=0.036 Score=61.28 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=65.1
Q ss_pred hhhHHHHHHHHHHc--CCCeEEEeCCCC-hHHHHHHHHHhCCceEEEEecCCccCCCC-------CCCchHHHHHHHHhh
Q 021527 178 LEETESLQKEAMKN--KIELVLFTTPTT-PTDRMKAIVEASEGFVYLVSSIGVTGARA-------SISGHVQTLLREIKE 247 (311)
Q Consensus 178 ~ee~~~~~~~~~~~--gi~~I~lisp~t-~~eri~~i~~~a~gfiY~vs~~G~TG~~~-------~~~~~~~~~l~~vk~ 247 (311)
+|+..++...+++. +..++.-+.++. ..+..+..++..-.+|.+....|.||... +.+ ....|.++.+
T Consensus 977 ~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~P--t~~aL~ev~~ 1054 (1479)
T 1ea0_A 977 IEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLP--WEMGLSEVHQ 1054 (1479)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchh--HHHHHHHHHH
Confidence 35566677777776 444333333332 22333334443334443322335555321 122 2234555444
Q ss_pred c-------CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchh
Q 021527 248 S-------STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 286 (311)
Q Consensus 248 ~-------~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~ 286 (311)
. .++||++.+||.+..|+.+.+.+|||+|-+||++...+
T Consensus 1055 al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~ 1100 (1479)
T 1ea0_A 1055 VLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAM 1100 (1479)
T ss_dssp HHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHH
T ss_pred HHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHH
Confidence 3 26999999999999999999999999999999998765
No 305
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=96.30 E-value=0.14 Score=50.29 Aligned_cols=194 Identities=15% Similarity=0.166 Sum_probs=101.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCH
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGV 156 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~ 156 (311)
+...++++.+.+. +.++.+|.+|=. +.||-+-+.- -+.++.++ .+.||++..-..+|-.+ .
T Consensus 33 ~~a~~~v~~~~~~-v~~~Kvg~~lf~--~~G~~~v~~L-------------~~~~~~~~--~g~~VflDlK~~DIpnT-~ 93 (453)
T 3qw4_B 33 EECKRLIEQTHEY-AAAYKPNAAFFE--FFGAEGWAAL-------------SEVIRAVP--AGIPVVLDAKRGDIADT-A 93 (453)
T ss_dssp HHHHHHHHHHGGG-CSEEEEBHHHHH--TTHHHHHHHH-------------HHHHHTSC--TTSCBEEEEEECCCHHH-H
T ss_pred HHHHHHHHHhCCc-CcEEEEcHHHHH--hcCHHHHHHH-------------HHHHHhhc--CCCeEEEEeecCChHHH-H
Confidence 6677777877654 899999988821 2354432211 11222223 26789998766655433 3
Q ss_pred HHHHHHHHH-cCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCCh---------------HHHHHHHHH-hC--Cc
Q 021527 157 DNFMSTVRD-IGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP---------------TDRMKAIVE-AS--EG 217 (311)
Q Consensus 157 ~~fi~~~~~-aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~---------------~eri~~i~~-~a--~g 217 (311)
..+++.+.+ .|+|.+.++-..-.+ .+....+..|-.+..+++-+.+ .+.+.+.++ .. .|
T Consensus 94 ~~~a~~~~~~lg~d~vTvh~~~G~~--~l~~~~~~~~~~v~vL~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g 171 (453)
T 3qw4_B 94 DAYATSAFKHLNAHAITASPYMGSD--SLQPFMRYPDKAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNG 171 (453)
T ss_dssp HHHHHHHHTTSCCSEEEECSTTCHH--HHHHHHTCTTSEEEEEEECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTS
T ss_pred HHHHHHHHHHcCCCEEEEcccCCHH--HHHHHHHhhCCcEEEEEeCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcC
Confidence 456776554 899999996332122 2223222233222333221111 133333333 21 23
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE-eeCCCCHHHHHHHHHcCCcE------EEEhhHhhchhhhc
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV-GFGISKPEHVQQVAGWGADG------VIVGSAMVKLLGEA 289 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v-GfGIst~e~v~~v~~~GADG------vIVGSaiv~~~~~~ 289 (311)
.+=+|. |.| .+ +.++.+|+.+ +.++++ |.|-.. .+..++...|+|. ++||-.|.+.
T Consensus 172 ~~GvV~--gat------~~---~e~~~ir~~~~~~~~l~PGig~qg-~tp~~a~~~g~d~~~~~~livvgR~I~~A---- 235 (453)
T 3qw4_B 172 NVGLVV--GAT------DP---VALARVRARAPTLWFLVPGIGAQG-GSLKASLDAGLRADGSGMLINVSRGLARA---- 235 (453)
T ss_dssp CEEEEE--CTT------CH---HHHHHHHHHCSSCCEEECCSSTTC-CCHHHHHHHHCCTTSCCEEEEESHHHHSC----
T ss_pred CeEEEE--CCC------CH---HHHHHHHHhCCCCeEEECCcCCCC-CCHHHHHHhcCCcccCCceEecChhhccC----
Confidence 332221 111 11 3477788765 456655 555431 2344555577887 9999999884
Q ss_pred CCchhHHHHHHHHHHHHH
Q 021527 290 QSPEEGLKELEKFAKSLK 307 (311)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~ 307 (311)
.+|.+..+++.+-+++.+
T Consensus 236 ~dp~~aa~~i~~~i~~~r 253 (453)
T 3qw4_B 236 ADPRAAAKELCEEINAIR 253 (453)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 345555555555554443
No 306
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.26 E-value=0.033 Score=51.32 Aligned_cols=116 Identities=12% Similarity=-0.032 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCC-----CCCCCChHHHHHHHHHHHHcCCC
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPY-----SDPLADGPVIQAAATRSLARGTN 123 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~Pf-----sDP~aDGp~Iq~a~~~Al~~G~~ 123 (311)
.+.+.++.+++.-...++.-+.++. +.+...++++.++++|+|.|.+-.-. -|+....|....+ ....|.+
T Consensus 145 ~~~~iv~~vr~~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~---~~~gG~s 220 (311)
T 1jub_A 145 ATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPK---DGFGGIG 220 (311)
T ss_dssp HHHHHHHHHTTTCCSCEEEEECCCC-SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGG---GGEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccC---CCCCccc
Confidence 4566777776554455666665553 66788889999999999999884321 1111111100000 0000111
Q ss_pred ----HHHHHHHHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 124 ----FNAILSMLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 124 ----~~~~~~~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
....++.++++++.+ ++||+..+-.. . -+.+.++..+|+|+|.+.
T Consensus 221 g~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~-----~-~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 221 GAYIKPTALANVRAFYTRLKPEIQIIGTGGIE-----T-GQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp SGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC-----S-HHHHHHHHHHTCSEEEEC
T ss_pred cccccHHHHHHHHHHHHhcCCCCCEEEECCCC-----C-HHHHHHHHHcCCCEEEEc
Confidence 112256888999888 89999876321 1 233444456899999884
No 307
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.26 E-value=0.032 Score=51.05 Aligned_cols=104 Identities=17% Similarity=0.225 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCC---------CCCCC-------CChHHHHH
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVP---------YSDPL-------ADGPVIQA 112 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~P---------fsDP~-------aDGp~Iq~ 112 (311)
.+.+.++++++.-...++.-+.++ ..+..++++.++++|+|.|.+... -..|. ..|+.+.
T Consensus 151 ~~~eii~~v~~~~~~pv~vk~~~~---~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~- 226 (311)
T 1ep3_A 151 VAAALVKACKAVSKVPLYVKLSPN---VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIK- 226 (311)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSC---SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGH-
T ss_pred HHHHHHHHHHHhcCCCEEEEECCC---hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccch-
Confidence 456777777665334566666543 445578889999999999999321 11121 1222111
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 113 AATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 113 a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
...++.++++++.+++||+..+-.. . .+.+..+.++|+|+|.+.
T Consensus 227 ------------~~~~~~i~~i~~~~~ipvia~GGI~-----~-~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 227 ------------PVALKLIHQVAQDVDIPIIGMGGVA-----N-AQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp ------------HHHHHHHHHHHTTCSSCEEECSSCC-----S-HHHHHHHHHHTCSEEEEC
T ss_pred ------------HHHHHHHHHHHHhcCCCEEEECCcC-----C-HHHHHHHHHcCCCEEEEC
Confidence 1125688888888899999865321 1 234555667899999884
No 308
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=96.26 E-value=0.077 Score=48.27 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=75.0
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH------------HHHHHhCC--
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM------------KAIVEASE-- 216 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri------------~~i~~~a~-- 216 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++|- +.....-.
T Consensus 82 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 160 (254)
T 3m9y_A 82 SPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGE-TDEERESGKANDVVGEQVKKAVAGLSED 160 (254)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHTTCCHH
T ss_pred CHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHHCCCHHHHHHHHHHHHHhcCCHH
Confidence 456789999999999731 01232222 45578899998887764 434331 11111111
Q ss_pred ----ceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 217 ----GFVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 217 ----gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
-.|-|.+ ..| ||.. ..+....+..+.||+. -+++|++|++| +++|+.+++ .-+.||+-||
T Consensus 161 ~~~~vvIAYEPvWAIG-TG~~-At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV-~~~N~~~l~~~~diDG~LVG 237 (254)
T 3m9y_A 161 QLKSVVIAYEPIWAIG-TGKS-STSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSV-KPNNIKEYMAQTDIDGALVG 237 (254)
T ss_dssp HHHHCEEEECCGGGCC---CC-CCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCC-CTTTHHHHHTSTTCCEEEES
T ss_pred HhCCEEEEECChhhhc-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCc-CHHHHHHHHcCCCCCeEEee
Confidence 1344432 333 6643 2344555555555552 25899999999 589999998 6679999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
+|-.+
T Consensus 238 gASL~ 242 (254)
T 3m9y_A 238 GASLK 242 (254)
T ss_dssp GGGSS
T ss_pred HHhhC
Confidence 99887
No 309
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.25 E-value=0.13 Score=44.46 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCc
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG 236 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~ 236 (311)
.+.++.+.+.|++.+.+.+...+....+++.++++++.++.........++++...+..-.++ . .| . .+.
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V--~--~~---~---~~~ 91 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLI--V--TP---N---IHS 91 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEE--E--CS---S---CCH
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEE--E--eC---C---CCH
Confidence 345667788899999987665555556666777778766553333334566666555433333 2 12 1 122
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+.++..++ .+.++++| ++|++++.+..+.|+|.+.+
T Consensus 92 ---~~~~~~~~-~g~~~~~g--~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 92 ---EVIRRAVG-YGMTVCPG--CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp ---HHHHHHHH-TTCEEECE--ECSHHHHHHHHHTTCSEEEE
T ss_pred ---HHHHHHHH-cCCCEEee--cCCHHHHHHHHHCCCCEEEE
Confidence 34544443 46677766 89999999999999999986
No 310
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=96.25 E-value=0.071 Score=50.42 Aligned_cols=136 Identities=10% Similarity=0.034 Sum_probs=92.2
Q ss_pred cEEEEEeCCC--CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--C
Q 021527 64 ALIPYITAGD--PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--S 139 (311)
Q Consensus 64 ~li~yi~~G~--P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~ 139 (311)
.+-.|.+.|+ ++.+.+.+.++.+.+.|.+.+.+-+- ++ +++...+.++.+|+.+ +
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g------~~---------------~~~~~~e~v~avr~a~G~d 191 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVG------RP---------------DLKEDVDRVSALREHLGDS 191 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECC------CS---------------SHHHHHHHHHHHHHHHCTT
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCC------CC---------------CHHHHHHHHHHHHHHhCCC
Confidence 4445766664 46788999999999999999998421 11 2334456777887754 6
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+|+.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 192 ~~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP------------------ 225 (371)
T 2ovl_A 192 FPLMVDA--NM------------------------KWTVDGAIRAARALAPFDLHWIE--EP------------------ 225 (371)
T ss_dssp SCEEEEC--TT------------------------CSCHHHHHHHHHHHGGGCCSEEE--CC------------------
T ss_pred CeEEEEC--CC------------------------CCCHHHHHHHHHHHHhcCCCEEE--CC------------------
Confidence 7776642 21 11235666677777777776441 11
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
++++..+.++++++.+++||+.+-.+.++++++++++.| +|++.+.-
T Consensus 226 --------------~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 226 --------------TIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp --------------SCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred --------------CCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCc
Confidence 111223567888888899999999999999999998765 79887743
No 311
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=96.23 E-value=0.008 Score=58.36 Aligned_cols=155 Identities=14% Similarity=0.093 Sum_probs=88.5
Q ss_pred HHHHHHHHHHCCCCEEEE--cC---------CCCCCCCC--hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC-CcEEE
Q 021527 79 TAEALKLLDSCGSDIIEL--GV---------PYSDPLAD--GPVIQAAATRSLARGTNFNAILSMLKEVVPQMS-CPIAL 144 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IEl--G~---------PfsDP~aD--Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~-iPiil 144 (311)
+.+.++...++|.|+||| +. |.++---| |--+.+- .+-.+++++.+|+.+. -||.+
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr----------~r~~~ei~~av~~~~~~~~v~~ 239 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENR----------ARLILELIDHLSTIVGADKIGI 239 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH----------HHHHHHHHHHHHHHHCGGGEEE
T ss_pred HHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhC----------hHHHHHHHHHHHHHhCCCeEEE
Confidence 677788889999999999 33 55444444 1112221 1234677777776643 36655
Q ss_pred Eec-CcchhccCHHHHHHHHHHcCCcEEEec-C--CChhhHHHHHHHH---HHcC--CCeEEEeCCCChHHHHHHHHHhC
Q 021527 145 FTY-YNPILKRGVDNFMSTVRDIGIRGLVVP-D--VPLEETESLQKEA---MKNK--IELVLFTTPTTPTDRMKAIVEAS 215 (311)
Q Consensus 145 m~Y-~n~i~~~g~~~fi~~~~~aGadGviip-D--lp~ee~~~~~~~~---~~~g--i~~I~lisp~t~~eri~~i~~~a 215 (311)
-.- ++.+ +|+-.. | .|.++...+.+.+ .+.| ++.|-+..+.+..
T Consensus 240 r~~~~~~~-----------------~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~---------- 292 (407)
T 3tjl_A 240 RISPWATF-----------------QNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSG---------- 292 (407)
T ss_dssp EECTTCCG-----------------GGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEET----------
T ss_pred EECccccc-----------------CCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCC----------
Confidence 321 1111 111111 2 1344556666777 6667 8877776553210
Q ss_pred CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHc----CCcEEEEhhHhhc
Q 021527 216 EGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGW----GADGVIVGSAMVK 284 (311)
Q Consensus 216 ~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~----GADGvIVGSaiv~ 284 (311)
.+ +. + .+. .. +.++.+|+..+.||++.+||++++++.++++. +||.|-+|.+++.
T Consensus 293 -~~-~~----~-~~~----~~---~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 293 -NV-DV----S-EED----QA---GDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp -TE-EC----C-GGG----CC---CCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred -CC-cC----C-ccc----hh---HHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 00 00 0 000 00 12455666667899999999987766555544 5999999998875
No 312
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=96.22 E-value=0.48 Score=44.92 Aligned_cols=214 Identities=19% Similarity=0.202 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH--
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF-- 124 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~-- 124 (311)
...+.+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=- ..|- + ....|..+
T Consensus 6 ~~~~~~ll~~A~~~~-yAV~AfN---v~n~e~~~Avl~AAee~~sPvIlq~-------s~g~-~------~y~~g~~~~~ 67 (349)
T 3elf_A 6 PEVYAEMLGQAKQNS-YAFPAIN---CTSSETVNAAIKGFADAGSDGIIQF-------STGG-A------EFGSGLGVKD 67 (349)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEE---CCSHHHHHHHHHHHHHTTCCEEEEE-------CHHH-H------HHHHCTTTCC
T ss_pred HHHHHHHHHHHHHcC-ceEEEEe---eCCHHHHHHHHHHHHHhCCCEEEEc-------ChhH-H------hhcCcchhhh
Confidence 456788888877664 3454454 3467888899999999999876432 1120 0 11112211
Q ss_pred -----HHHHHHHHHhhccCCCcEEEEec-C-c----chhccC----HHHHHHHHHHcCCcEEEe--cCCChhh----HHH
Q 021527 125 -----NAILSMLKEVVPQMSCPIALFTY-Y-N----PILKRG----VDNFMSTVRDIGIRGLVV--PDVPLEE----TES 183 (311)
Q Consensus 125 -----~~~~~~i~~ir~~~~iPiilm~Y-~-n----~i~~~g----~~~fi~~~~~aGadGvii--pDlp~ee----~~~ 183 (311)
..+..+++.+.++.++||.|-.- . + +... + ..+.++.+.+.|.+.+.+ ..+|+|| ..+
T Consensus 68 ~v~g~~~~a~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~-~~l~~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~ 146 (349)
T 3elf_A 68 MVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVR-PLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQE 146 (349)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSCEEEEECCCCGGGGGGTHH-HHHHHHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHCCCCEEEECCCCCCcccchhhh-hhHHHHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHH
Confidence 23345777777888999998741 1 1 1110 1 123444555568999888 4688887 677
Q ss_pred HHHHHHHcCCCeEE----E------e-------CCCChHHHHHHHHHh-C---CceEEE-E---ecCCccC-CCCCCCch
Q 021527 184 LQKEAMKNKIELVL----F------T-------TPTTPTDRMKAIVEA-S---EGFVYL-V---SSIGVTG-ARASISGH 237 (311)
Q Consensus 184 ~~~~~~~~gi~~I~----l------i-------sp~t~~eri~~i~~~-a---~gfiY~-v---s~~G~TG-~~~~~~~~ 237 (311)
+.+.+.+.|+.+=- + + .-|+| +...+..+. . .|...+ + +.-|++- ....++.+
T Consensus 147 vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~P-eea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~ 225 (349)
T 3elf_A 147 LLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSP-EDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPD 225 (349)
T ss_dssp HHHHHHHTTCEEEEEESCCBC-------------CCCH-HHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTH
T ss_pred HHHHHHHcCCeEEEEeeccccccCCcccccccccCCCH-HHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHH
Confidence 88889888864211 0 0 01344 444454443 2 234444 2 3334331 12234443
Q ss_pred HHHHHHHHhhcC-----------CCcEEE--eeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 238 VQTLLREIKESS-----------TKPVAV--GFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 238 ~~~~l~~vk~~~-----------~~Pv~v--GfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.|+++++.+ ++|++. |.|+. .|++++..+.|.-=+=|+|.+-.
T Consensus 226 ---~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p-~e~i~~ai~~GV~KiNi~Tdl~~ 281 (349)
T 3elf_A 226 ---ILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSL-KSEIEEALRYGVVKMNVDTDTQY 281 (349)
T ss_dssp ---HHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCC-HHHHHHHHHTTEEEEEECHHHHH
T ss_pred ---HHHHHHHHHHhhcCCccccCCCcEEEeCCCCCC-HHHHHHHHHcCCEEEEcchHHHH
Confidence 455554432 588766 66775 79999999999888888887754
No 313
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=96.22 E-value=0.016 Score=52.64 Aligned_cols=122 Identities=18% Similarity=0.255 Sum_probs=75.7
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHHH------------HHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDRM------------KAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri------------~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.| ..+-...+.++|+.+|+-+.- +-++|- +...+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 157 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGE-KLDEREAGITEKVVFEQTKVIADNVKDW 157 (248)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHHTCSCG
T ss_pred CHHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhCCChHHHHHHHHHHHHhhhhhh
Confidence 456789999999999631 1122 222455678899988877664 434442 111110
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.+|+. . +++|+.|++|+. +++.+++ .-+.||+-||++
T Consensus 158 ~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgA 234 (248)
T 1r2r_A 158 SKVVLAYEPVWAIG-TGKT-ATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTG-ATCKELASQPDVDGFLVGGA 234 (248)
T ss_dssp GGEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCT-TTHHHHHTSTTCCEEEESGG
T ss_pred hceEEEEecHHhhC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCH-hHHHHHHcCCCCCeeEechH
Confidence 122343432 333 6643 4455666766667742 1 379999999984 6666655 567999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 235 sL~ 237 (248)
T 1r2r_A 235 SLK 237 (248)
T ss_dssp GGS
T ss_pred HhC
Confidence 887
No 314
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.22 E-value=0.062 Score=49.46 Aligned_cols=175 Identities=16% Similarity=0.197 Sum_probs=101.5
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
| -|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~------------~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~ 80 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIVCGTT----GEAT------------TMTETERKETIKFVIDKVNKRIPVIAGTGSN 80 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEESSGG----GTGG------------GSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCCCCcEEEeCCcc
Confidence 5 788999999999999999999884111 0111 13455555666665543 368988876554
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHHH-HHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETESL-QKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~~-~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
... ..-+..+.+.++|+|++++. - ...++..++ ...+...++..+++=.| +.+.+-+.++++ -..+
T Consensus 81 ~t~--~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pni 157 (291)
T 3a5f_A 81 NTA--ASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE-DKNI 157 (291)
T ss_dssp SHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT-STTE
T ss_pred cHH--HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-CCCE
Confidence 322 12356777899999999883 1 122444443 44455567776665333 234465656654 2444
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC--CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS--TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~--~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ ..+.++++.+ +.-|+.|.. +.+-..+..|+||+|-|++
T Consensus 158 vgiK~---s~g-------d~-~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~a 207 (291)
T 3a5f_A 158 VAVXE---ASG-------NI-SQIAQIKALCGDKLDIYSGND----DQIIPILALGGIGVISVLA 207 (291)
T ss_dssp EEEEE---CSC-------CH-HHHHHHHHHHGGGSEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred EEEeC---CCC-------CH-HHHHHHHHhcCCCeEEEeCcH----HHHHHHHHCCCCEEEecHH
Confidence 43311 111 11 2333443322 345655543 3455566799999999976
No 315
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=96.21 E-value=0.45 Score=46.37 Aligned_cols=208 Identities=13% Similarity=0.091 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc---CCC-----CCCCCChHHHHHHHHHHHHc
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG---VPY-----SDPLADGPVIQAAATRSLAR 120 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG---~Pf-----sDP~aDGp~Iq~a~~~Al~~ 120 (311)
...+.|.++.++++. ++++|-=|. -.++.++++|.+.|=+. +-. +.++-|+-.
T Consensus 48 ~~a~~lr~Ll~~~~~----l~~~ga~D~----~sA~~~~~aGf~Aiy~SG~~vAa~~~~~~~G~PD~~~----------- 108 (433)
T 3eol_A 48 MGANRLWKLIHEEDF----VNALGALSG----NQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSL----------- 108 (433)
T ss_dssp HHHHHHHHHHHHSSC----EEEEBCSSH----HHHHHHHHTTCCCEEEC-------------------------------
T ss_pred HHHHHHHHHhccCCC----EEeCCCCcH----HHHHHHHHhCCCEEEechHHHHhccchhcCCCCCCcc-----------
Confidence 456777777666543 234454332 34556677899998883 222 223334321
Q ss_pred CCCHHHHHHHHHHhhcc-------------------CCCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC--
Q 021527 121 GTNFNAILSMLKEVVPQ-------------------MSCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV-- 176 (311)
Q Consensus 121 G~~~~~~~~~i~~ir~~-------------------~~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl-- 176 (311)
.+.+++++.+++|... ..+||++. ||-|+. .+.+.++.+.++|+.|+.+=|-
T Consensus 109 -~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~d~~lPIiaD~DtGfG~~~---nv~rtVk~~~~AGaAGi~IEDQ~~ 184 (433)
T 3eol_A 109 -YPANAGPELAKRINRTLQRADQIETAEGKGLSVDTWFAPIVADAEAGFGDPL---DAFEIMKAYIEAGAAGVHFEDQLA 184 (433)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTTSCCSSSCSCCCEEEECC---CCHH---HHHHHHHHHHHHTCSEEEEESBCC
T ss_pred -CCHHHHHHHHHHHHHHHHHhhhhhhhhcccccccCCCCCeEEECCCCCCCcH---HHHHHHHHHHHcCCeEEEEecCCC
Confidence 3445556666665432 26999998 566644 3567889999999999999773
Q ss_pred --------------ChhhHH-HHHHH---HHHcCCCeEEEe-CC----------------------------------CC
Q 021527 177 --------------PLEETE-SLQKE---AMKNKIELVLFT-TP----------------------------------TT 203 (311)
Q Consensus 177 --------------p~ee~~-~~~~~---~~~~gi~~I~li-sp----------------------------------~t 203 (311)
|.+|.. +++.. ....|.+.++.. +. ..
T Consensus 185 ~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~g 264 (433)
T 3eol_A 185 SEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNG 264 (433)
T ss_dssp ---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCS
T ss_pred CCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccccceeccCcccccccccccCC
Confidence 344532 33322 222366655542 10 11
Q ss_pred hH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeC---CC-----CHHH----HHHH
Q 021527 204 PT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFG---IS-----KPEH----VQQV 268 (311)
Q Consensus 204 ~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfG---Is-----t~e~----v~~v 268 (311)
.+ +|.+.+++ .-..||+.+ +. ....++.++.+.++.....++++... .+ +.++ +.++
T Consensus 265 ld~AI~Ra~AY~~-GAD~If~e~-----~~--~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw~~~~~~~~~~~f~~eL 336 (433)
T 3eol_A 265 IEPCIARAIAYAP-YCDLIWMET-----SK--PDLAQARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQREL 336 (433)
T ss_dssp HHHHHHHHHHHGG-GCSEEEECC-----SS--CCHHHHHHHHHHHHHHSTTCCEEEECCSSSCHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCEEEEeC-----CC--CCHHHHHHHHHHhcccCCCcccccCCCCCCcccccCChhHHhHHHHHH
Confidence 22 44444444 334455533 11 12345666777777654455544322 22 1111 4678
Q ss_pred HHcCCcEEEEhhHhhchhh
Q 021527 269 AGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 269 ~~~GADGvIVGSaiv~~~~ 287 (311)
.++|..-+++|.+..+...
T Consensus 337 a~lGv~~v~~~~a~~raa~ 355 (433)
T 3eol_A 337 GAMGYKFQFITLAGFHQLN 355 (433)
T ss_dssp HHHTEEEEEETTHHHHHHH
T ss_pred HHcCCeEEEeCcHHHHHHH
Confidence 8899999999999888653
No 316
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=96.16 E-value=0.075 Score=48.73 Aligned_cols=173 Identities=14% Similarity=0.155 Sum_probs=104.6
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
|.-|.+.+.+.++.+.++ +|.|-+.--- -+++ -.+.++-.++++.+.+ ++||+.-+-.|..
T Consensus 14 g~iD~~~l~~lv~~li~~-v~gl~v~Gtt----GE~~------------~Ls~~Er~~v~~~~~~--rvpviaGvg~~~t 74 (283)
T 2pcq_A 14 GRLDEEAFRELAQALEPL-VDGLLVYGSN----GEGV------------HLTPEERARGLRALRP--RKPFLVGLMEETL 74 (283)
T ss_dssp CCBCHHHHHHHHHHHGGG-SSCCEETCTT----TTGG------------GSCHHHHHHHHHTCCC--SSCCEEEECCSSH
T ss_pred CCcCHHHHHHHHHHHHhh-CCEEEECCcC----cCch------------hcCHHHHHHHHHHHHh--CCcEEEeCCCCCH
Confidence 566788999999999999 9998874111 0111 1456666778887776 8998887655432
Q ss_pred hccCHHHHHHHHHHcCCcEEEec--CC----ChhhHHHHHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCceEE
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVP--DV----PLEETESLQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviip--Dl----p~ee~~~~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gfiY 220 (311)
. ..-+..+.+.++|+||+++. -. ..++..++.+.+.+ ++..+++=.| +.+.+-+.++++ -..++.
T Consensus 75 ~--~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~-~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivg 150 (283)
T 2pcq_A 75 P--QAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE-KMPLFLYHVPQNTKVDLPLEAVEALAP-HPNVLG 150 (283)
T ss_dssp H--HHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH-HSCEEEEECHHHHCCCCCHHHHHHHTT-STTEEE
T ss_pred H--HHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHhc-CCCEEE
Confidence 2 12356777889999999883 21 23556666666555 7876665333 234455656654 344443
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSai 282 (311)
+=. .+| ++ ..+.++++. .+..|+.|.. +.+-..+..|+||+|-|++-
T Consensus 151 iKd---ssg-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~~n 198 (283)
T 2pcq_A 151 IKD---SSG-------DL-SRIAFYQARLQEFRVYTGHA----PTFLGALALGAEGGILAAAN 198 (283)
T ss_dssp EEE---CSC-------CH-HHHHHHHHHCSSCEEEECCG----GGHHHHHHTTCCEEECGGGG
T ss_pred EEE---CCC-------CH-HHHHHHHhcCCCEEEEECcH----HHHHHHHHcCCCEEEeCHHH
Confidence 311 111 11 234444441 1345655543 34556677999999988654
No 317
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=96.16 E-value=0.015 Score=53.58 Aligned_cols=122 Identities=19% Similarity=0.291 Sum_probs=75.6
Q ss_pred HHHHHHHcCCcEEEecCC----Chhh----HHHHHHHHHHcCCCeEEEeCCCChHHHH------------HHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEE----TESLQKEAMKNKIELVLFTTPTTPTDRM------------KAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri------------~~i~~~---- 214 (311)
-...+++.|++.+|+..- .+.| ..+-...+.++|+.+|+-+.- +-++|- +...+.
T Consensus 98 S~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGE-tleeReag~t~~vv~~Ql~~~l~~~~~~ 176 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGE-KLEEREAGHTKDVNFRQLQAIVDKGVSW 176 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHTTTCCS
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhCCChHHHHHHHHHHHHhhhhhh
Confidence 456789999999999631 1122 222455678889998877654 434442 111110
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.||+. . +++|+.|++|+. +|+.+++ .-+.||+-||++
T Consensus 177 ~~vvIAYEPvWAIG-TGkt-Atpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~-~N~~el~~~~diDG~LVGgA 253 (275)
T 1mo0_A 177 ENIVIAYEPVWAIG-TGKT-ASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTA-DNAAELGKKPDIDGFLVGGA 253 (275)
T ss_dssp TTEEEEECCGGGTT-TSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCT-TTHHHHTTSTTCCEEEESGG
T ss_pred cCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCH-hhHHHHhcCCCCCeeEechH
Confidence 122343432 333 6743 4455666777767742 1 389999999984 6666655 567999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 254 SLk 256 (275)
T 1mo0_A 254 SLK 256 (275)
T ss_dssp GGS
T ss_pred HhC
Confidence 887
No 318
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=96.14 E-value=0.0067 Score=55.81 Aligned_cols=122 Identities=23% Similarity=0.352 Sum_probs=75.3
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH--------H-HHHHh-------
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM--------K-AIVEA------- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri--------~-~i~~~------- 214 (311)
-...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.- +-++|- . .+...
T Consensus 102 S~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGE-tleere~g~t~~vv~~Ql~~~l~~v~~~ 180 (271)
T 3krs_A 102 SCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGE-SLSERETGKTNDVIQKQLTEALKDVSDL 180 (271)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHTTTCCCC
T ss_pred cHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-cHHHHHCCCHHHHHHHHHHHHHhchHhh
Confidence 456789999999999731 01122223 66778899998887764 334432 1 11111
Q ss_pred CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEhhH
Q 021527 215 SEGFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVA-GWGADGVIVGSA 281 (311)
Q Consensus 215 a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVGSa 281 (311)
..-.|-|.+ ..| ||.. ..++...+..+.||+.. +++|++|++|+ ++++.+++ .-+.||+-||+|
T Consensus 181 ~~~vIAYEPvWAIG-TG~t-Atpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~-~~N~~el~~~~diDG~LVGgA 257 (271)
T 3krs_A 181 SNLVIAYEPIWAIG-TGVV-ATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVT-PDNCNELIKCADIDGFLVGGA 257 (271)
T ss_dssp TTEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCC-TTTHHHHHHSTTCCEEEESGG
T ss_pred cCEEEEECChhhhc-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcC-HHHHHHHhcCCCCCEEEeeHH
Confidence 112333332 223 5542 33555666666666541 47999999998 57776665 567999999999
Q ss_pred hhc
Q 021527 282 MVK 284 (311)
Q Consensus 282 iv~ 284 (311)
-.+
T Consensus 258 SL~ 260 (271)
T 3krs_A 258 SLK 260 (271)
T ss_dssp GGS
T ss_pred hhh
Confidence 877
No 319
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=96.13 E-value=0.22 Score=46.45 Aligned_cols=205 Identities=17% Similarity=0.147 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
++..+.|+..++.+ -++-.|= -.+++...-++++.++.+..+|-=- ..|- +. .. |. .+
T Consensus 13 n~~~~ll~~A~~~~-yAV~AfN---v~n~e~~~Avl~AAee~~sPvIlq~-------s~g~-~~------y~-g~---~~ 70 (306)
T 3pm6_A 13 NRALPLLTFARTHS-FAIPAIC---VYNLEGILAIIRAAEHKRSPAMILL-------FPWA-IQ------YA-DS---LL 70 (306)
T ss_dssp CSSHHHHHHHHHTT-CCEEEEE---CSSHHHHHHHHHHHHHTTCCEEEEE-------CHHH-HH------HH-TT---HH
T ss_pred cHHHHHHHHHHHCC-cEEEEEe---eCCHHHHHHHHHHHHHhCCCEEEEc-------ChhH-Hh------hc-cH---HH
Confidence 46677888776654 3454454 3467889999999999999976432 1121 10 11 11 23
Q ss_pred HHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHc--------CCcEEEe--cCCChhh----HHHHHHHHHHcCC
Q 021527 128 LSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDI--------GIRGLVV--PDVPLEE----TESLQKEAMKNKI 193 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~a--------GadGvii--pDlp~ee----~~~~~~~~~~~gi 193 (311)
...+..+.++.++||.|-. -+..-.+.+..+.++ |.+.+.+ ..+|+|| ..++.+.+++.|+
T Consensus 71 ~~~~~~~A~~~~VPVaLHl-----DHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gv 145 (306)
T 3pm6_A 71 VRTAASACRAASVPITLHL-----DHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGI 145 (306)
T ss_dssp HHHHHHHHHHCSSCEEEEE-----EEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHCCCCEEEEc-----CCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 4566666667899998863 122224578889998 9999988 4688887 6678888888876
Q ss_pred CeEE----E------e-------CCCChHHHHHHHHHhCCceEEEE----ecCCccCC-CCCCCchHHHHHHHHhhcC--
Q 021527 194 ELVL----F------T-------TPTTPTDRMKAIVEASEGFVYLV----SSIGVTGA-RASISGHVQTLLREIKESS-- 249 (311)
Q Consensus 194 ~~I~----l------i-------sp~t~~eri~~i~~~a~gfiY~v----s~~G~TG~-~~~~~~~~~~~l~~vk~~~-- 249 (311)
.+=- + + .--|.++..++..+ .|...+- +..|.+.. ...++ .+.|+++++.+
T Consensus 146 sVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~--TgvD~LAvaiGt~HG~Yk~~~p~Ld---~~~L~~I~~~v~~ 220 (306)
T 3pm6_A 146 ATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVA--TGINWLAPAFGNVHGNYGPRGVQLD---YERLQRINEAVGE 220 (306)
T ss_dssp EEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHT--TTCSEECCCSSCCSSCCCTTCCCCC---HHHHHHHHHHHTT
T ss_pred eEEEEeeeeccccCCccccccccccCCCHHHHHHHHH--cCCCEEEEEcCccccCcCCCCCccC---HHHHHHHHHHhCC
Confidence 3210 0 0 01244455556664 5554552 33343321 12233 35688888876
Q ss_pred CCcEEE--eeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 250 TKPVAV--GFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 250 ~~Pv~v--GfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
++|++. |.|+. .|++++..+.|.-=+=|+|.+-..
T Consensus 221 ~vpLVlHGgSG~p-~e~i~~ai~~GV~KiNi~Tdl~~a 257 (306)
T 3pm6_A 221 RVGLVLHGADPFT-KEIFEKCIERGVAKVNVNRAVNNE 257 (306)
T ss_dssp TSEEEECSCTTCC-HHHHHHHHHTTEEEEEESHHHHHH
T ss_pred CCCEEeeCCCCCC-HHHHHHHHHcCCeEEEeChHHHHH
Confidence 699866 66775 799999999998888899887543
No 320
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=96.12 E-value=0.079 Score=47.22 Aligned_cols=60 Identities=17% Similarity=0.093 Sum_probs=41.6
Q ss_pred HHHHHHHHhhc---CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHH
Q 021527 238 VQTLLREIKES---STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 306 (311)
Q Consensus 238 ~~~~l~~vk~~---~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l 306 (311)
-.++++++|+. .++||++-.+-.+.+...+..+.|||+.+. |.+. +++....+.+.++.+
T Consensus 184 G~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~yl~-----KP~~----~~~L~~~i~~~l~~~ 246 (259)
T 3luf_A 184 GISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDFLN-----QPFE----PEELQCRVSHNLEAL 246 (259)
T ss_dssp HHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEEEE-----SSCC----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhheEc-----CCCC----HHHHHHHHHHHHHhH
Confidence 35788888875 258998888888788888999999999865 4332 234444555555444
No 321
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=96.11 E-value=0.13 Score=47.11 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=100.0
Q ss_pred CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcc
Q 021527 71 AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNP 150 (311)
Q Consensus 71 ~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~ 150 (311)
-|.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+..+- |+.-+-.|.
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~------------Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~ 75 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTT----GLGPA------------LSLQEKMELTDAATSAARR-VIVQVASLN 75 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTT----TTGGG------------SCHHHHHHHHHHHHHHCSS-EEEECCCSS
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccc----cChhh------------CCHHHHHHHHHHHHHHhCC-EEEeeCCCC
Confidence 477888999999999999999999884111 11111 4555666677777665444 555443332
Q ss_pred hhccCHHHHHHHHHHcCCcEEEec--C----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCce
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVP--D----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGF 218 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviip--D----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gf 218 (311)
.. ..-+..+.+.++|+||+++. - ...++..+ |...+...++..+++=.| +.+.+-+.+ -..+
T Consensus 76 t~--~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~----~pni 149 (286)
T 2r91_A 76 AD--EAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE----LGCI 149 (286)
T ss_dssp HH--HHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH----HSCE
T ss_pred HH--HHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh----cCCE
Confidence 21 12356777889999999883 2 22344444 455666778877665433 223344333 2344
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
+.+=. .+| ++ ..+.++++. .+..|+.|.. +.+-..+..|+||+|-|++
T Consensus 150 vgiKd---s~g-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~~a 198 (286)
T 2r91_A 150 RGVKD---TNE-------SL-AHTLAYKRYLPQARVYNGSD----SLVFASFAVRLDGVVASSA 198 (286)
T ss_dssp EEEEE---CCS-------CH-HHHHHHHHHCTTSEEEECCG----GGHHHHHHTTCSEECCGGG
T ss_pred EEEEe---CCC-------CH-HHHHHHHhcCCCEEEEEccH----HHHHHHHHcCCCEEEecHH
Confidence 33311 111 12 234444431 2455666653 3455667789999999876
No 322
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=96.10 E-value=0.027 Score=51.54 Aligned_cols=122 Identities=20% Similarity=0.292 Sum_probs=75.5
Q ss_pred HHHHHHHcCCcEEEecCCC----hhh----HHHHHHHHHHcCCCeEEEeCCCChHHHH------------HHHHH-hC--
Q 021527 159 FMSTVRDIGIRGLVVPDVP----LEE----TESLQKEAMKNKIELVLFTTPTTPTDRM------------KAIVE-AS-- 215 (311)
Q Consensus 159 fi~~~~~aGadGviipDlp----~ee----~~~~~~~~~~~gi~~I~lisp~t~~eri------------~~i~~-~a-- 215 (311)
-...+++.|++.+|+..-- +.| ..+-...+.++|+.+|+-+.- +-++|- +...+ ..
T Consensus 86 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE-tleere~g~t~~vv~~Ql~~~l~~~~~~ 164 (261)
T 1m6j_A 86 HVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGE-TEAQRIANQTEEVVAAQLKAINNAISKE 164 (261)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHHHSCTG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC-cHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 4567899999999996310 112 222445677889998877664 434442 11111 11
Q ss_pred ---CceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----C------CCcEEEeeCCCCHHHHHHHH-HcCCcEEEEh
Q 021527 216 ---EGFVYLVS--SIGVTGARASISGHVQTLLREIKES----S------TKPVAVGFGISKPEHVQQVA-GWGADGVIVG 279 (311)
Q Consensus 216 ---~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----~------~~Pv~vGfGIst~e~v~~v~-~~GADGvIVG 279 (311)
.-.|-|.+ ..| ||.. ..++...+..+.+|+. . +++|+.|++|+ ++++.++. .-+.||+-||
T Consensus 165 ~~~~~vIAYEPvWAIG-TG~~-Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVG 241 (261)
T 1m6j_A 165 AWKNIILAYEPVWAIG-TGKT-ATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVN-PANCNELAKKADIDGFLVG 241 (261)
T ss_dssp GGGGEEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCC-TTTHHHHHTSTTCCEEEES
T ss_pred HcCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcC-HhhHHHHhcCCCCCeeEec
Confidence 22343432 333 6743 4455666766667742 1 47999999998 46666665 5669999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
++-.+
T Consensus 242 gAsL~ 246 (261)
T 1m6j_A 242 GASLD 246 (261)
T ss_dssp GGGGS
T ss_pred HHHhC
Confidence 99887
No 323
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=96.10 E-value=0.021 Score=51.74 Aligned_cols=121 Identities=18% Similarity=0.302 Sum_probs=75.8
Q ss_pred HHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHH------------HHHHHHh-CC--
Q 021527 160 MSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDR------------MKAIVEA-SE-- 216 (311)
Q Consensus 160 i~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~er------------i~~i~~~-a~-- 216 (311)
...+++.|++.+|+..- .+.|..++ ...+.++|+.+|+-+.-+ -++| ++...+. ..
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEt-leereag~t~~vv~~Ql~~~l~~~~~~~ 152 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGET-NEEREAGRTAAVVLTQLAAVAQKLSKEA 152 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCC-HHHHHTTCHHHHHHHHHHHHHTTCCTGG
T ss_pred HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCc-HHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 77899999999999731 01233333 566788999988877643 3332 1111111 11
Q ss_pred ---ceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC----------CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhh
Q 021527 217 ---GFVYLVS--SIGVTGARASISGHVQTLLREIKESS----------TKPVAVGFGISKPEHVQQVAGW-GADGVIVGS 280 (311)
Q Consensus 217 ---gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~----------~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGS 280 (311)
-.|-|.+ ..| ||.. ..++...+..+.+|+.. +++|+.|++|+ |+|+.+++.. ..||+.||.
T Consensus 153 ~~~~vIAYEPvWAIG-TG~~-Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGg 229 (244)
T 2v5b_A 153 WSRVVIAYEPVWAIG-TGKV-ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVT-AKNARTLYQMRDINGFLVGG 229 (244)
T ss_dssp GGGEEEEECCHHHHS-SSCC-CCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCC-HHHHHHHHTSTTCCEEEESG
T ss_pred cCCEEEEECCHHHhC-CCCC-CCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCC-HhHHHHHhcCCCCCeeeech
Confidence 1233322 233 6643 44555666666666521 48999999997 8999998832 379999998
Q ss_pred Hhhc
Q 021527 281 AMVK 284 (311)
Q Consensus 281 aiv~ 284 (311)
|=.+
T Consensus 230 ASL~ 233 (244)
T 2v5b_A 230 ASLK 233 (244)
T ss_dssp GGSS
T ss_pred HHHH
Confidence 8665
No 324
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.10 E-value=0.084 Score=51.83 Aligned_cols=185 Identities=13% Similarity=0.140 Sum_probs=106.1
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC-cEEEEecCcchhccCHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC-PIALFTYYNPILKRGVDN 158 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i-Piilm~Y~n~i~~~g~~~ 158 (311)
.+.++...++|+|++=+-+--..|= -++.+..-++++. ..+ .|.+|. |+ ..+.
T Consensus 265 ~eda~~a~~~Gad~iGfIf~~~SpR----------------~V~~~~a~~i~~~----~~v~~VgVFv--n~----~~~~ 318 (452)
T 1pii_A 265 GQDAKAAYDAGAIYGGLIFVATSPR----------------CVNVEQAQEVMAA----APLQYVGVFR--NH----DIAD 318 (452)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTT----------------BCCHHHHHHHHHH----CCCEEEEEES--SC----CHHH
T ss_pred HHHHHHHHhcCCCEEEeecCCCCCC----------------CCCHHHHHHHHhc----CCCCEEEEEe--CC----CHHH
Confidence 5778888999999987764223331 1333322233333 222 355543 42 2355
Q ss_pred HHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCch
Q 021527 159 FMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGH 237 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~ 237 (311)
..+.+.+.+.|.|=++ |-+++.+..++..+. .++..+--+......++ ..+. ...++.+-+..|.||.. ++.+
T Consensus 319 i~~~~~~~~ld~vQLHG~E~~~~~~~l~~~~p-~~~~iika~~v~~~~~~-~~~~--~~d~~LlD~~~GGtG~~--fdW~ 392 (452)
T 1pii_A 319 VVDKAKVLSLAAVQLHGNEEQLYIDTLREALP-AHVAIWKALSVGETLPA-REFQ--HVDKYVLDNGQGGSGQR--FDWS 392 (452)
T ss_dssp HHHHHHHHTCSEEEECSCCCHHHHHHHHHHSC-TTSEEEEEEECSSSCCC-CCCT--TCCEEEEESCSCCSSCC--CCGG
T ss_pred HHHHHHhcCCCEEEECCCCCHHHHHHHHhhcc-CCCcEEEEEecCCccch-hhhh--cccEEEecCCCCCCCCc--cCHH
Confidence 5566788999999886 444443433322110 14555544433321111 0010 11233334566778864 4443
Q ss_pred HHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCCchhHHHHHHHHHHHHHh
Q 021527 238 VQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
+ + +...+.|++..+|++ |+|+.+....|..||=|=|.+...-+ ....+++++|++.++.
T Consensus 393 ~---l---~~~~~~p~iLAGGL~-p~NV~~ai~~~p~gvDvsSGVE~~pG-----~KD~~ki~~f~~~~r~ 451 (452)
T 1pii_A 393 L---L---NGQSLGNVLLAGGLG-ADNCVEAAQTGCAGLDFNSAVESQPG-----IKDARLLASVFQTLRA 451 (452)
T ss_dssp G---G---TTSCCTTEEEESSCC-TTTHHHHHTTCCSEEEECGGGEEETT-----EECHHHHHHHHHHHHC
T ss_pred H---h---hcccCCcEEEEcCCC-HHHHHHHHhcCCCEEEeCCceeCCCC-----CCCHHHHHHHHHHHhh
Confidence 2 2 233468999999996 89998877799999999998875221 2346789999988763
No 325
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=96.07 E-value=0.52 Score=46.00 Aligned_cols=207 Identities=15% Similarity=0.093 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc---CC-----CCCCCCChHHHHHHHHHHHHc
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG---VP-----YSDPLADGPVIQAAATRSLAR 120 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG---~P-----fsDP~aDGp~Iq~a~~~Al~~ 120 (311)
.-.+.|.++..+++.. +++|--|. -.++.++++|.+.|=+. +- .+.++-|+-
T Consensus 52 ~~a~~Lr~ll~~~~~l----~~~Ga~D~----~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~~------------ 111 (439)
T 3i4e_A 52 RGAEKLWTLINNEPFV----NALGALTG----NQAMQQVKAGLKAIYLSGWQVAGDANVAGEMYPDQS------------ 111 (439)
T ss_dssp HHHHHHHHHHHHSSCE----EEEBCCSH----HHHHHHHHHTCSCEEECHHHHHHHTCTTCCCCCSSS------------
T ss_pred HHHHHHHHHHhcCCCE----EeCCCCCH----HHHHHHHHhCCCEEEechHHHhcccccccCCCCCcc------------
Confidence 3456666666564432 24444332 34455677799998883 11 122333321
Q ss_pred CCCHHHHHHHHHHhhcc--------------------CC--CcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecC
Q 021527 121 GTNFNAILSMLKEVVPQ--------------------MS--CPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPD 175 (311)
Q Consensus 121 G~~~~~~~~~i~~ir~~--------------------~~--iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipD 175 (311)
-.+.+++++.+++|... ++ +||++. ||-|+. .+.+.++.+.++|+.|+.+=|
T Consensus 112 ~~~~~ev~~~v~rI~~a~~~ad~i~~~~~~~~~~~~~~d~~~PviaD~dtGfG~~~---~v~~~vk~~~~aGaaGi~iED 188 (439)
T 3i4e_A 112 LYPANSVPLVVKRINNTLTRADQIQWSEGKNPGDEGYVDFFAPIVADAEAGFGGVL---NAFELMKAMIEAGASGVHFED 188 (439)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTTTSSHH---HHHHHHHHHHHHTCSEEEEES
T ss_pred cCCHHHHHHHHHHHHHHHHHhHhhhhhhccccccccccCCCCCeEEECCCCCCccH---HHHHHHHHHHHcCCEEEEEeC
Confidence 13455566666665321 34 999998 466643 356788899999999999977
Q ss_pred C----------------ChhhHH-HHHHH---HHHcCCCeEEEeC-C--------------------------------C
Q 021527 176 V----------------PLEETE-SLQKE---AMKNKIELVLFTT-P--------------------------------T 202 (311)
Q Consensus 176 l----------------p~ee~~-~~~~~---~~~~gi~~I~lis-p--------------------------------~ 202 (311)
- |.+|.. +++.. .+..|.+.++..= . .
T Consensus 189 q~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~ 268 (439)
T 3i4e_A 189 QLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKP 268 (439)
T ss_dssp BCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECC
T ss_pred CCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccccchhhcccCcccccccccC
Confidence 3 344533 33322 2334777655431 1 1
Q ss_pred ChH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCC---------CHHH----HH
Q 021527 203 TPT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGIS---------KPEH----VQ 266 (311)
Q Consensus 203 t~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIs---------t~e~----v~ 266 (311)
.-+ +|.+.+++ .-..||+.+ |. ....++.++.+.++.....+++++ |.+ +.++ ..
T Consensus 269 gldeAI~Ra~AY~~-GAD~if~E~-----~~--~~~eei~~f~~~v~~~~P~~~l~~-~~sPsfnw~~~~~~~~~~~f~~ 339 (439)
T 3i4e_A 269 GLEQAISRGLAYAP-YADLIWCET-----GK--PDLEYAKKFAEAIHKQFPGKLLSY-NCSPSFNWKKNLDDATIAKFQK 339 (439)
T ss_dssp SHHHHHHHHHHHTT-TCSEEEECC-----SS--CCHHHHHHHHHHHHHHSTTCEEEE-ECCSSSCHHHHSCHHHHHTHHH
T ss_pred CHHHHHHHHHHHHh-hCCEEEecC-----CC--CCHHHHHHHHHHhcccCCceEEee-CCCCCCcCcccCCHHHHHHHHH
Confidence 123 34444433 333455533 11 123446667777766555555553 332 2233 56
Q ss_pred HHHHcCCcEEEEhhHhhchhh
Q 021527 267 QVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 267 ~v~~~GADGvIVGSaiv~~~~ 287 (311)
++.++|..-++++.+..+...
T Consensus 340 eL~~lGv~~v~~~la~~raa~ 360 (439)
T 3i4e_A 340 ELGAMGYKFQFITLAGFHALN 360 (439)
T ss_dssp HHHHHTCCEEEETTHHHHHHH
T ss_pred HHHHcCCeEEEeChHHHHHHH
Confidence 788899999999999888654
No 326
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=96.06 E-value=0.19 Score=46.86 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=88.6
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc-CCCcE
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-MSCPI 142 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-~~iPi 142 (311)
.+-.|.+.|..+.+.+.+.++.+.+.|.+.+++-+-. +.+.-++.++.+|+. .++++
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------------~~~~d~~~v~avr~~g~~~~l 185 (345)
T 2zad_A 128 EIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------------NLKEDIEAVEEIAKVTRGAKY 185 (345)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------------CHHHHHHHHHHHHHHSTTCEE
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------------CHHHHHHHHHHHHhhCCCCeE
Confidence 3445666666677888899999999999999984211 223335567777764 34566
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCC--eEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIE--LVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~--~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
.+- .|.- +..+++.++.+.+.++|+. .+- .
T Consensus 186 ~vD--an~~------------------------~~~~~a~~~~~~l~~~~i~~~~iE--~-------------------- 217 (345)
T 2zad_A 186 IVD--ANMG------------------------YTQKEAVEFARAVYQKGIDIAVYE--Q-------------------- 217 (345)
T ss_dssp EEE--CTTC------------------------SCHHHHHHHHHHHHHTTCCCSEEE--C--------------------
T ss_pred EEE--CCCC------------------------CCHHHHHHHHHHHHhcCCCeeeee--C--------------------
Confidence 543 2310 1346666677777777776 321 1
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
.++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+
T Consensus 218 ------------P~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 218 ------------PVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp ------------CSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred ------------CCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 1222223567888888889999999999999999988666 788888
No 327
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.03 E-value=0.23 Score=46.23 Aligned_cols=174 Identities=10% Similarity=0.073 Sum_probs=101.0
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCcEEEEecCc
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCPIALFTYYN 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iPiilm~Y~n 149 (311)
|.-|.+.+.+.++.+.++|+|.|-+. |-+ ....-.+.++-.++++.+.+. -++||+.-+-.|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~---------GtT-------GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~s 91 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPN---------GNT-------GEFYALTIEEAKQVATRVTELVNGRATVVAGIGYS 91 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTT---------SGG-------GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEC---------ccc-------CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcC
Confidence 44667889999999999999999874 210 001114555556666666543 368988765323
Q ss_pred chhccCHHHHHHHHHHcCCcEEEec--C---CChhhHHH-HHHHHHHcCCCeEEEeCCC--ChHHHHHHHHHhCCceEEE
Q 021527 150 PILKRGVDNFMSTVRDIGIRGLVVP--D---VPLEETES-LQKEAMKNKIELVLFTTPT--TPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 150 ~i~~~g~~~fi~~~~~aGadGviip--D---lp~ee~~~-~~~~~~~~gi~~I~lisp~--t~~eri~~i~~~a~gfiY~ 221 (311)
+- ..-+..+.+.++|+|++++. - ...++..+ |...++..++.++++= .+ .+.+-+.++++ -..++.+
T Consensus 92 t~---~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn-~tg~l~~~~~~~La~-~pnIvgi 166 (314)
T 3d0c_A 92 VD---TAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF-KDAHLSDDVIKELAP-LDKLVGI 166 (314)
T ss_dssp HH---HHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE-CCTTSCTHHHHHHTT-CTTEEEE
T ss_pred HH---HHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe-CCCCcCHHHHHHHHc-CCCEEEE
Confidence 21 12357778899999999884 1 12244444 5566677787766543 11 23455555543 2344433
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC----CCcEEEeeCCCCHH-HHHHHHHcCCcEEEEhhH
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS----TKPVAVGFGISKPE-HVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~----~~Pv~vGfGIst~e-~v~~v~~~GADGvIVGSa 281 (311)
=. .+| ++ ..+.++++.+ +..|+.|. -+ .+-..+..|++|+|-|++
T Consensus 167 Kd---ssg-------d~-~~~~~~~~~~~~~~~f~v~~G~----d~~~~~~~l~~G~~G~is~~a 216 (314)
T 3d0c_A 167 KY---AIN-------DI-QRVTQVMRAVPKSSNVAFICGT----AEKWAPFFYHAGAVGFTSGLV 216 (314)
T ss_dssp EE---CCC-------CH-HHHHHHHHHSCGGGCCEEEETT----HHHHHHHHHHHTCCEEEESGG
T ss_pred Ee---CCC-------CH-HHHHHHHHhcCCCCCEEEEEeC----cHHHHHHHHHcCCCEEEecHH
Confidence 11 111 12 3344554433 33454443 24 566677799999999975
No 328
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.02 E-value=0.06 Score=50.74 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=66.6
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCC-----CChhhHHHHHHHHHHCCCCEEEEcCCCCC--CCCChHHHHHHHHHHHHcCC
Q 021527 50 LAETFTRLKKQGKVALIPYITAGD-----PDLSTTAEALKLLDSCGSDIIELGVPYSD--PLADGPVIQAAATRSLARGT 122 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~-----P~~~~~~e~~~~L~~~GaD~IElG~PfsD--P~aDGp~Iq~a~~~Al~~G~ 122 (311)
+.+..+..++.=...+..=|.+++ -+.+++.++++.|++.|+|.|++-....+ +...++ +.
T Consensus 197 ~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~------------~~ 264 (340)
T 3gr7_A 197 LGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYP------------GY 264 (340)
T ss_dssp HHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT------------TT
T ss_pred HHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCc------------cc
Confidence 455666666544444555566653 34688999999999999999999432211 111121 12
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcC-CcEEEe
Q 021527 123 NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVV 173 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aG-adGvii 173 (311)
+ +++++++|+.+++||+..+-.+. .+.++.+.+.| +|.|.+
T Consensus 265 ~----~~~~~~ik~~~~iPVi~~GgI~s------~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 265 Q----VPFAELIRREADIPTGAVGLITS------GWQAEEILQNGRADLVFL 306 (340)
T ss_dssp T----HHHHHHHHHHTTCCEEEESSCCC------HHHHHHHHHTTSCSEEEE
T ss_pred c----HHHHHHHHHHcCCcEEeeCCCCC------HHHHHHHHHCCCeeEEEe
Confidence 2 35778888889999999875431 23556666777 999988
No 329
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=96.02 E-value=0.42 Score=44.69 Aligned_cols=178 Identities=20% Similarity=0.283 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHHCCCCEEEE-cCCCC---CCCC------ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 77 STTAEALKLLDSCGSDIIEL-GVPYS---DPLA------DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IEl-G~Pfs---DP~a------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
+...+.++.+.+.|+..|-| |+|-. |+.. ||++. +.++.||+++.= +++++
T Consensus 59 d~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~------------------~air~iK~~~pd-l~vit 119 (330)
T 1pv8_A 59 KRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAI------------------EAIHLLRKTFPN-LLVAC 119 (330)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHH------------------HHHHHHHHHSTT-SEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHH------------------HHHHHHHHHCCC-eEEEE
Confidence 57999999999999999888 88753 2222 34333 245566654211 33442
Q ss_pred --cCcc--------hh-ccC-HH------HHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCCCe-EEEeC----
Q 021527 147 --YYNP--------IL-KRG-VD------NFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKIEL-VLFTT---- 200 (311)
Q Consensus 147 --Y~n~--------i~-~~g-~~------~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~-I~lis---- 200 (311)
.+.+ +. ..| +. ...+. .+++|+|-|--.|+=.......++.+.++|... +...+
T Consensus 120 DvcLc~YT~HGHcGil~~~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaK 199 (330)
T 1pv8_A 120 DVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAK 199 (330)
T ss_dssp EECCC---------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CCHHHHHHHHHHHTTCTTTCEEBCCCEE
T ss_pred eeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeecccccccHHHHHHHHHHhCCCcCCceEeehhHH
Confidence 2111 12 112 21 23332 367999998767877677888999999999965 55432
Q ss_pred ----------------------------CCChHHHHHHHHH-hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-C
Q 021527 201 ----------------------------PTTPTDRMKAIVE-ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-T 250 (311)
Q Consensus 201 ----------------------------p~t~~eri~~i~~-~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~ 250 (311)
|....|-+++... ..+|...++=.- .+ ...+.|+++|+.+ +
T Consensus 200 yASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKP-------al--~YLDIi~~vk~~~p~ 270 (330)
T 1pv8_A 200 FASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKP-------GM--PYLDIVREVKDKHPD 270 (330)
T ss_dssp CCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEES-------CG--GGHHHHHHHHHHSTT
T ss_pred HhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEec-------Cc--cHHHHHHHHHHhcCC
Confidence 2222344444332 356654443111 11 2468899999998 9
Q ss_pred CcEEE----e----------eCCCCH-----HHHHHHHHcCCcEEEEhhHhhc
Q 021527 251 KPVAV----G----------FGISKP-----EHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 251 ~Pv~v----G----------fGIst~-----e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+|+++ | -|.-+. |....++++|||++| |.+.+
T Consensus 271 ~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~Ii--TYfA~ 321 (330)
T 1pv8_A 271 LPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIII--TYYTP 321 (330)
T ss_dssp SCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEE--ETTHH
T ss_pred CCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEe--eecHH
Confidence 99965 1 232222 344567788888886 34443
No 330
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=96.00 E-value=0.13 Score=49.15 Aligned_cols=125 Identities=18% Similarity=0.152 Sum_probs=86.7
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEEEEecCcc
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIALFTYYNP 150 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPiilm~Y~n~ 150 (311)
..+.+.+.+.++.+.+.|.+.+++-+-++ . .+..++.++.+|+.+ ++|+.+-. |.
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~-----~----------------~~~~~e~v~avR~a~G~d~~l~vDa--n~ 203 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD-----S----------------LSISIQFVEKVREIVGDELPLMLDL--AV 203 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS-----S----------------HHHHHHHHHHHHHHHCSSSCEEEEC--CC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC-----h----------------HHHHHHHHHHHHHHhCCCCEEEEEc--CC
Confidence 45678899999999999999999842221 0 233456777887753 67777743 21
Q ss_pred hhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCC
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGA 230 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~ 230 (311)
-+..+++.++.+.+.++|+..+- .|
T Consensus 204 ------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP----------------------------- 228 (391)
T 2qgy_A 204 ------------------------PEDLDQTKSFLKEVSSFNPYWIE--EP----------------------------- 228 (391)
T ss_dssp ------------------------CSCHHHHHHHHHHHGGGCCSEEE--CS-----------------------------
T ss_pred ------------------------CCCHHHHHHHHHHHHhcCCCeEe--CC-----------------------------
Confidence 12346676777777777776441 11
Q ss_pred CCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 231 RASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 231 ~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
+++...+.++++|+.+++||+.+-.+.++++++++++.| +|.+.+
T Consensus 229 ---~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 229 ---VDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp ---SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred ---CChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 111223568888888899999999999999999999766 788876
No 331
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.99 E-value=0.03 Score=51.35 Aligned_cols=46 Identities=20% Similarity=0.235 Sum_probs=39.7
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+.++.+|+.+++||+..-.|-++.|+.+...+|||||++|.+...
T Consensus 102 ~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred HHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 3678999998999998877777788999999999999999977654
No 332
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=95.99 E-value=0.022 Score=52.34 Aligned_cols=122 Identities=17% Similarity=0.238 Sum_probs=78.4
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHHH----HHHHHcCCCeEEEeCCCChHHHH------------HHHHHh----
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESLQ----KEAMKNKIELVLFTTPTTPTDRM------------KAIVEA---- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~~----~~~~~~gi~~I~lisp~t~~eri------------~~i~~~---- 214 (311)
-...+++.|++.+|+..- -+.|..++. ..+.++|+.+|+-+.- |-++|- +.....
T Consensus 104 Sa~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGE-tleeReag~t~~vv~~Ql~~~l~~~~~~ 182 (272)
T 4g1k_A 104 AAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGE-TLAEREAGTTEQVVGAQLDAVLAVLSPD 182 (272)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHHTTSCHH
T ss_pred CHHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-CHHHHhCCCHHHHHHHHHHHHHhCCCHH
Confidence 456789999999999631 012333333 6678899998887764 334441 111110
Q ss_pred --CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhcC------CCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHhh
Q 021527 215 --SEGFVYLVS--SIGVTGARASISGHVQTLLREIKESS------TKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAMV 283 (311)
Q Consensus 215 --a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~~------~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSaiv 283 (311)
..-.|-|.+ ..| ||.. ..+....+..+.||+.. +++|+.|+.++ |+|+.+++.. ..||+.||.|-.
T Consensus 183 ~~~~vVIAYEPVWAIG-TG~t-At~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV~-~~N~~el~~~~dIDG~LVGgASL 259 (272)
T 4g1k_A 183 EAARIVVAYEPVWAIG-TGKS-ATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSVK-ADNAAELFGQPDIDGGLIGGASL 259 (272)
T ss_dssp HHTTCEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCCC-TTTHHHHHTSTTCCEEEECGGGG
T ss_pred HcCCEEEEECcHhhcc-CCCC-CCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCcC-HhHHHHHhcCCCCCEEEechHhc
Confidence 122344433 333 5643 34556667677777753 58999999997 7999999844 589999998877
Q ss_pred c
Q 021527 284 K 284 (311)
Q Consensus 284 ~ 284 (311)
+
T Consensus 260 ~ 260 (272)
T 4g1k_A 260 K 260 (272)
T ss_dssp S
T ss_pred C
Confidence 6
No 333
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=95.96 E-value=0.048 Score=52.14 Aligned_cols=42 Identities=12% Similarity=0.170 Sum_probs=35.9
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCC---CCHHHHHHHHHcCCcEEEEh
Q 021527 237 HVQTLLREIKESSTKPVAVGFGI---SKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGI---st~e~v~~v~~~GADGvIVG 279 (311)
...+.|+++|+.+++||++. || .++++++.+.++|||+++|+
T Consensus 193 ~~~~~I~~l~~~~~~PVivK-~vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 193 SWKKHLSDYAKKLQLPFILK-EVGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHHHHCCSCEEEE-ECSSCCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHhhCCCEEEE-ECCCCCCHHHHHHHHHcCCCEEEEe
Confidence 35578999999999999986 34 57999999999999999994
No 334
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=95.95 E-value=0.014 Score=54.60 Aligned_cols=121 Identities=13% Similarity=0.157 Sum_probs=71.6
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHH----HHHHHHHHcCCCeEEEeCCCChHHH-----------------HHHHHH
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETE----SLQKEAMKNKIELVLFTTPTTPTDR-----------------MKAIVE 213 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~----~~~~~~~~~gi~~I~lisp~t~~er-----------------i~~i~~ 213 (311)
-...+++.|++.+|+..- -+.|.. +=...+.++|+.+|+-+.-+.. +| ++...+
T Consensus 132 Sa~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtle-ere~~~~~~g~t~~vv~~Ql~~~l~ 210 (310)
T 3s6d_A 132 SPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVST-LGPIVSEAIGRAVGECEAQIRPVLE 210 (310)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSC-CCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHH-HhhhhccccccHHHHHHHHHHHHHh
Confidence 456789999999999731 011222 2245678889998887764432 11 111111
Q ss_pred -h---CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc---------CCCcEEEeeCCCCHHHHHH--HHHcCCcEE
Q 021527 214 -A---SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES---------STKPVAVGFGISKPEHVQQ--VAGWGADGV 276 (311)
Q Consensus 214 -~---a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~---------~~~Pv~vGfGIst~e~v~~--v~~~GADGv 276 (311)
. ..-.|-|.+ ..| ||.. ..++...+..+.||+. -+++|+.|++|+ ++++.+ +. -+.||+
T Consensus 211 ~l~~~~~vVIAYEPVWAIG-TGk~-Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~-~~n~~~~~l~-~dVDG~ 286 (310)
T 3s6d_A 211 ALPRDAPVIFAYEPVWAIG-KPQP-ARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAG-PGLWGPGGLG-KEVDGM 286 (310)
T ss_dssp HSCTTSCEEEEECCGGGC-------CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEEC-TTTTTTTSGG-GTCSEE
T ss_pred cCCcccceEEEECChhhcc-CCCC-CCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccC-HHHHhhhccc-CCCCEE
Confidence 1 112333322 222 5632 3455566666667663 257999999997 677777 54 569999
Q ss_pred EEhhHhhc
Q 021527 277 IVGSAMVK 284 (311)
Q Consensus 277 IVGSaiv~ 284 (311)
.||++-.+
T Consensus 287 LVGgASL~ 294 (310)
T 3s6d_A 287 FLGRFAHD 294 (310)
T ss_dssp EECGGGGS
T ss_pred Eeeheeec
Confidence 99999887
No 335
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=95.95 E-value=0.047 Score=49.87 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=46.7
Q ss_pred HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHH
Q 021527 81 EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFM 160 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi 160 (311)
...+.|++.|+++++- ...|.-.| .|..- ++.++.+++..++||+.-+- .+.-+.+
T Consensus 147 ~~akrl~~~G~~aVmP---lg~pIGsG------------~Gi~~---~~lI~~I~e~~~vPVI~eGG------I~TPsDA 202 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMP---LAGLIGSG------------LGICN---PYNLRIILEEAKVPVLVDAG------VGTASDA 202 (265)
T ss_dssp HHHHHHHHSCCSEEEE---CSSSTTCC------------CCCSC---HHHHHHHHHHCSSCBEEESC------CCSHHHH
T ss_pred HHHHHHHHhCCCEEEe---CCccCCCC------------CCcCC---HHHHHHHHhcCCCCEEEeCC------CCCHHHH
Confidence 6667777777777744 22232222 23311 46778888888999999652 2335678
Q ss_pred HHHHHcCCcEEEec
Q 021527 161 STVRDIGIRGLVVP 174 (311)
Q Consensus 161 ~~~~~aGadGviip 174 (311)
..+.+.|+|||++.
T Consensus 203 a~AmeLGAdgVlVg 216 (265)
T 1wv2_A 203 AIAMELGCEAVLMN 216 (265)
T ss_dssp HHHHHHTCSEEEES
T ss_pred HHHHHcCCCEEEEC
Confidence 88999999999995
No 336
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=95.95 E-value=0.24 Score=46.07 Aligned_cols=187 Identities=17% Similarity=0.208 Sum_probs=110.0
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEE--cCCCCCCCCCh---HHHHHHHHHHHHcCC-CHHHHHHHHHHhh
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIEL--GVPYSDPLADG---PVIQAAATRSLARGT-NFNAILSMLKEVV 135 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IEl--G~PfsDP~aDG---p~Iq~a~~~Al~~G~-~~~~~~~~i~~ir 135 (311)
..-.++|+++.+-+.+.+.+++..+.+.|++-|-+ |=|-++. | +.- .|+ +..++++.+++..
T Consensus 71 g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~---g~~~~~~---------~~f~~a~~Lv~~ir~~~ 138 (310)
T 3apt_A 71 GLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGE---RVFRPHP---------EGFRYAAELVALIRERY 138 (310)
T ss_dssp TCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTC---CSCCCCT---------TSCSSHHHHHHHHHHHH
T ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCC---CCCCCCC---------CCCCCHHHHHHHHHHhC
Confidence 45688999999999999999999999999997665 5332220 2 100 012 1223444444432
Q ss_pred ccCCCcEEEEecCcc-hhccCHHHHHH---HHHHcCCcEEEec-CCChhhHHHHHHHHHHcCC--CeEEEeCCCChHHHH
Q 021527 136 PQMSCPIALFTYYNP-ILKRGVDNFMS---TVRDIGIRGLVVP-DVPLEETESLQKEAMKNKI--ELVLFTTPTTPTDRM 208 (311)
Q Consensus 136 ~~~~iPiilm~Y~n~-i~~~g~~~fi~---~~~~aGadGviip-Dlp~ee~~~~~~~~~~~gi--~~I~lisp~t~~eri 208 (311)
. .+.-|.+-+|-.. ......+.-++ .=.++|+|.++-- =...+...+|.+.|++.|+ ..++.+.|-++...+
T Consensus 139 g-~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~ 217 (310)
T 3apt_A 139 G-DRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQL 217 (310)
T ss_dssp G-GGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHH
T ss_pred C-CCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHH
Confidence 1 1245677666420 11223333333 2346899986553 2233567889999999885 566677777776666
Q ss_pred HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcE---EEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 209 KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPV---AVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv---~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
..+.+ ..|. .+|.. +++++.+.-+-|- .+|.-+. .|+++++.+.|++|+=+=|
T Consensus 218 ~~~~~-------------~~Gv--~iP~~---l~~~l~~~~~d~~~~~~~gi~~a-~e~~~~L~~~gv~GiH~yt 273 (310)
T 3apt_A 218 RRFTE-------------VCGA--SIPGP---LLAKLERHQDDPKAVLEIGVEHA-VRQVAELLEAGVEGVHFYT 273 (310)
T ss_dssp HHHHH-------------TSCC--CCCHH---HHHHHHHSTTCHHHHHHHHHHHH-HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHH-------------cCCC--CCCHH---HHHHHHhccCCHHHHHHHHHHHH-HHHHHHHHHCCCCeEEEeC
Confidence 55544 1222 35554 4444444332232 2333333 4889999988999996654
No 337
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.90 E-value=0.05 Score=52.89 Aligned_cols=93 Identities=10% Similarity=-0.040 Sum_probs=60.7
Q ss_pred Ccc-EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCC-CC----------CChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 62 KVA-LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSD-PL----------ADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 62 ~~~-li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsD-P~----------aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
++. +..=|.++.. .+...++++.++++|+|.|-+-+-+.+ .. ..|+.+.. --++
T Consensus 268 ~~P~V~VKi~pd~~-~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p-------------~al~ 333 (415)
T 3i65_A 268 KKPLVFVKLAPDLN-QEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKD-------------ISTK 333 (415)
T ss_dssp SCCEEEEEECSCCC-HHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHH-------------HHHH
T ss_pred CCCeEEEEecCCCC-HHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchH-------------HHHH
Confidence 344 5666666553 357899999999999999999765432 11 12333332 2256
Q ss_pred HHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 130 MLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 130 ~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
+++++++.+ ++||+..+=.. . .+.+.++..+|+|+|.+.
T Consensus 334 ~I~~v~~~v~~~iPIIg~GGI~-----s-~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 334 FICEMYNYTNKQIPIIASGGIF-----S-GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHTTTCSCEEECSSCC-----S-HHHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEECCCC-----C-HHHHHHHHHcCCCEEEEc
Confidence 888888877 79999876321 1 234445556899999884
No 338
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=95.88 E-value=0.41 Score=45.50 Aligned_cols=135 Identities=16% Similarity=0.100 Sum_probs=91.4
Q ss_pred ccEEEEEeCCCC--ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--
Q 021527 63 VALIPYITAGDP--DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-- 138 (311)
Q Consensus 63 ~~li~yi~~G~P--~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-- 138 (311)
..+-.|.+.|+. +.+.+.+.++.+.+.|.+.+++-+- ++ +++..++.++.+|+.+
T Consensus 131 ~~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g------~~---------------~~~~~~e~v~avR~a~G~ 189 (389)
T 2oz8_A 131 NRVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVG------HR---------------DFDRDLRRLELLKTCVPA 189 (389)
T ss_dssp SEEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECC------CS---------------SHHHHHHHHHHHHTTSCT
T ss_pred CceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccC------CC---------------CHHHHHHHHHHHHHhhCC
Confidence 344557666653 6788999999999999999998421 11 2334467888888865
Q ss_pred CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHH--cCCCeEEEeCCCChHHHHHHHHHhCC
Q 021527 139 SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK--NKIELVLFTTPTTPTDRMKAIVEASE 216 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~--~gi~~I~lisp~t~~eri~~i~~~a~ 216 (311)
++++.+-. |.- +..+++.++.+.+.+ +++..+ =.|
T Consensus 190 ~~~l~vDa--n~~------------------------~~~~~a~~~~~~l~~~g~~i~~i--EqP--------------- 226 (389)
T 2oz8_A 190 GSKVMIDP--NEA------------------------WTSKEALTKLVAIREAGHDLLWV--EDP--------------- 226 (389)
T ss_dssp TCEEEEEC--TTC------------------------BCHHHHHHHHHHHHHTTCCCSEE--ESC---------------
T ss_pred CCeEEEEC--CCC------------------------CCHHHHHHHHHHHHhcCCCceEE--eCC---------------
Confidence 56666632 310 123566667677777 554432 111
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.++++++.+ ++||+.+-.+ ++++++++++.| +|.+.++
T Consensus 227 -----------------~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 227 -----------------ILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp -----------------BCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred -----------------CCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 1112235678888888 8999999999 999999998776 7999997
No 339
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=95.87 E-value=0.88 Score=42.72 Aligned_cols=179 Identities=20% Similarity=0.290 Sum_probs=107.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEE-cCCC----CCCCC------ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEE
Q 021527 76 LSTTAEALKLLDSCGSDIIEL-GVPY----SDPLA------DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL 144 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IEl-G~Pf----sDP~a------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiil 144 (311)
.+...+.++.+.+.|+..|-| |+|- .|+.. ||++.+ .++.||+++.= +++
T Consensus 68 id~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~r------------------air~iK~~~pd-l~V 128 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQ------------------GIKFIREYFPE-LYI 128 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHH------------------HHHHHHHHCTT-SEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHH------------------HHHHHHHHCCC-eEE
Confidence 367999999999999999888 8864 34433 454433 45556654311 444
Q ss_pred Ee------cCc----chh-ccC-H------HHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCC-CeEEEeC--
Q 021527 145 FT------YYN----PIL-KRG-V------DNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKI-ELVLFTT-- 200 (311)
Q Consensus 145 m~------Y~n----~i~-~~g-~------~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi-~~I~lis-- 200 (311)
++ |.. .+. ..| + +...+. .+++|+|-|--.|+=.......++.+.++|. ..+..++
T Consensus 129 itDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYs 208 (342)
T 1h7n_A 129 ICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYA 208 (342)
T ss_dssp EEEECSTTTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTTHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred EEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeecccccccHHHHHHHHHHHCCCccCceEeech
Confidence 42 221 112 123 1 223332 3679999987778877788889999999999 4343321
Q ss_pred ------------------------------CCChHHHHHHHHH-hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC
Q 021527 201 ------------------------------PTTPTDRMKAIVE-ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS 249 (311)
Q Consensus 201 ------------------------------p~t~~eri~~i~~-~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~ 249 (311)
|....|-++++.. ..+|...++=.- .+ ...+.|+++|+.+
T Consensus 209 aKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKP-------al--~YLDIi~~vk~~~ 279 (342)
T 1h7n_A 209 AKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKP-------ST--FYLDIMRDASEIC 279 (342)
T ss_dssp EEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEES-------SG--GGHHHHHHHHHHT
T ss_pred HHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEec-------Cc--cHHHHHHHHHHhc
Confidence 3333454544432 356765553111 11 2468899999998
Q ss_pred -CCcEEE--------------eeCCCCH-----HHHHHHHHcCCcEEEEhhHhhc
Q 021527 250 -TKPVAV--------------GFGISKP-----EHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 250 -~~Pv~v--------------GfGIst~-----e~v~~v~~~GADGvIVGSaiv~ 284 (311)
++|+++ --|.-+. |.+..++++|||++| |.+.+
T Consensus 280 p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~Ii--TYfA~ 332 (342)
T 1h7n_A 280 KDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLII--TYLAP 332 (342)
T ss_dssp TTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEE--ETTHH
T ss_pred cCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEE--eecHH
Confidence 999965 1232222 345567788999886 44444
No 340
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=95.85 E-value=0.59 Score=43.52 Aligned_cols=173 Identities=15% Similarity=0.231 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHCCCCEEEE-cCCCC-CCCC------ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe--
Q 021527 77 STTAEALKLLDSCGSDIIEL-GVPYS-DPLA------DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT-- 146 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IEl-G~Pfs-DP~a------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~-- 146 (311)
+...+.++.+.+.|+..|-| |+|-. |+.. ||++.+ .++.||+.+.- +++++
T Consensus 58 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~g~v~r------------------air~iK~~~pd-l~vitDv 118 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVAR------------------MSRICKQTVPE-MIVMSDT 118 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGSTTSHHHH------------------HHHHHHHHCTT-SEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCCCCcHHH------------------HHHHHHHHCCC-eEEEEee
Confidence 57999999999999999887 88752 2222 344332 45556654311 44442
Q ss_pred ----cCc----chhccC-H------HHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC--------
Q 021527 147 ----YYN----PILKRG-V------DNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT-------- 200 (311)
Q Consensus 147 ----Y~n----~i~~~g-~------~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis-------- 200 (311)
|.. .+...| + +...+. .+++|+|-|--.|.=.......++.+.++|...+...+
T Consensus 119 cLc~YT~HGHcGil~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASa 198 (323)
T 1l6s_A 119 CFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASS 198 (323)
T ss_dssp CSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCS
T ss_pred eccccCCCCceEeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhHH
Confidence 211 122223 1 223332 36799999877788777888899999999997665432
Q ss_pred -----------------------CCChHHHHHHHHH-hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-
Q 021527 201 -----------------------PTTPTDRMKAIVE-ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV- 255 (311)
Q Consensus 201 -----------------------p~t~~eri~~i~~-~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v- 255 (311)
|....|-+++... ..+|...++=.- .++ ..+.|+++|+.+++|+++
T Consensus 199 fYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKP-------al~--YLDIi~~vk~~~~~P~aaY 269 (323)
T 1l6s_A 199 FYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKP-------AGA--YLDIVRELRERTELPIGAY 269 (323)
T ss_dssp CCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEES-------CTT--CHHHHHHHHTTCSSCEEEE
T ss_pred hhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEec-------Ccc--hhHHHHHHHHhcCCCeEEE
Confidence 2223344444432 356654443111 122 368899999999999965
Q ss_pred ---e----------eCCCC-----HHHHHHHHHcCCcEEE
Q 021527 256 ---G----------FGISK-----PEHVQQVAGWGADGVI 277 (311)
Q Consensus 256 ---G----------fGIst-----~e~v~~v~~~GADGvI 277 (311)
| -|.-+ -|....++.+|||++|
T Consensus 270 qVSGEYAMikaAa~~GwiD~~~~vlEsl~~~kRAGAd~Ii 309 (323)
T 1l6s_A 270 QVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIF 309 (323)
T ss_dssp ECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEE
T ss_pred EcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEe
Confidence 0 22222 2344566788888876
No 341
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=95.85 E-value=0.3 Score=46.17 Aligned_cols=134 Identities=12% Similarity=0.011 Sum_probs=89.3
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEEEEecCcc
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIALFTYYNP 150 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPiilm~Y~n~ 150 (311)
..+.+.+.+.++.+.+.|.+.+.+-+- .++. | ..-+.+...+.++.+|+.+ ++++.+-. |.
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g--~~~~-~------------~~~~~~~~~e~v~avr~a~g~d~~l~vDa--n~ 209 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTW--MPPV-S------------WAPDVKMDLKACAAVREAVGPDIRLMIDA--FH 209 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECC--CTTS-T------------TCCCHHHHHHHHHHHHHHHCTTSEEEEEC--CT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCC--cCcc-c------------cccchHHHHHHHHHHHHHhCCCCeEEEEC--CC
Confidence 366788999999999999999998421 1100 0 0113455567888888753 57777643 21
Q ss_pred hhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCC
Q 021527 151 ILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGA 230 (311)
Q Consensus 151 i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~ 230 (311)
-+..+++.++.+.+.++|+..+- .|
T Consensus 210 ------------------------~~~~~~a~~~~~~l~~~~i~~iE--~P----------------------------- 234 (382)
T 1rvk_A 210 ------------------------WYSRTDALALGRGLEKLGFDWIE--EP----------------------------- 234 (382)
T ss_dssp ------------------------TCCHHHHHHHHHHHHTTTCSEEE--CC-----------------------------
T ss_pred ------------------------CCCHHHHHHHHHHHHhcCCCEEe--CC-----------------------------
Confidence 11235666677777777776431 11
Q ss_pred CCCCCchHHHHHHHHhhcCCCcEEEeeCCCC-HHHHHHHHHcC-CcEEEEhhH
Q 021527 231 RASISGHVQTLLREIKESSTKPVAVGFGISK-PEHVQQVAGWG-ADGVIVGSA 281 (311)
Q Consensus 231 ~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst-~e~v~~v~~~G-ADGvIVGSa 281 (311)
++++..+.++++++.+++||+.+-.+.+ +++++++++.| +|.+.+--.
T Consensus 235 ---~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 235 ---MDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp ---SCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred ---CChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 1112235688888888999999999999 99999998776 799988433
No 342
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=95.85 E-value=1.2 Score=41.54 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=125.6
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+.+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=-- .| .+. . .| .+-+..
T Consensus 5 ~~~ll~~A~~~~-yAV~AfN---v~n~e~~~avi~AAee~~sPvIlq~s-------~g-~~~----y---~g--~~~~~~ 63 (307)
T 3n9r_A 5 GNEILLKAHKEG-YGVGAFN---FVNFEMLNAIFEAGNEENSPLFIQAS-------EG-AIK----Y---MG--IDMAVG 63 (307)
T ss_dssp HHHHHHHHHHHT-CCEEEEE---CSSHHHHHHHHHHHHHHTCCEEEEEE-------HH-HHH----H---HC--HHHHHH
T ss_pred HHHHHHHHHHcC-ceEEEEe---eCCHHHHHHHHHHHHHhCCCEEEEcC-------hh-hhh----h---CC--HHHHHH
Confidence 466777766554 3454454 34678888899999999888754321 12 010 0 11 122334
Q ss_pred HHHHhhcc-CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhh----HHHHHHHHHHcCCCeEE----E
Q 021527 130 MLKEVVPQ-MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEE----TESLQKEAMKNKIELVL----F 198 (311)
Q Consensus 130 ~i~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee----~~~~~~~~~~~gi~~I~----l 198 (311)
+++...++ .++||.|-. -+..-.+.+..|.++|.+.|.+ ..+|+|| ..++.+.++++|+.+=- +
T Consensus 64 ~v~~aa~~~~~VPValHL-----DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~i 138 (307)
T 3n9r_A 64 MVKIMCERYPHIPVALHL-----DHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRL 138 (307)
T ss_dssp HHHHHHHHSTTSCEEEEE-----EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHHHhcCCCcEEEEC-----CCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeee
Confidence 55555555 789998853 1111246788899999999988 4688887 67788899988874211 0
Q ss_pred ------e------CCCChHHHHHHHHHhCCceEEE-E---ecCCccC--CCCCCCchHHHHHHHHhhcCCCcEEE--ee-
Q 021527 199 ------T------TPTTPTDRMKAIVEASEGFVYL-V---SSIGVTG--ARASISGHVQTLLREIKESSTKPVAV--GF- 257 (311)
Q Consensus 199 ------i------sp~t~~eri~~i~~~a~gfiY~-v---s~~G~TG--~~~~~~~~~~~~l~~vk~~~~~Pv~v--Gf- 257 (311)
+ .--|.++..++..+.. |...+ + +..|.+- ....++ .+.|+++++..++|++. |.
T Consensus 139 gG~Ed~~~~~~~~~~yT~Peea~~Fv~~T-gvD~LAvaiGt~HG~Yk~~~~p~Ld---~~~L~~I~~~~~~PLVlHGgS~ 214 (307)
T 3n9r_A 139 MGIEDNISVDEKDAVLVNPKEAEQFVKES-QVDYLAPAIGTSHGAFKFKGEPKLD---FERLQEVKRLTNIPLVLHGASA 214 (307)
T ss_dssp CCC----------CCSCCHHHHHHHHHHH-CCSEEEECSSCCSSSBCCSSSCCCC---HHHHHHHHHHHCSCEEESSCCC
T ss_pred ccccCCcccccccccCCCHHHHHHHHHHH-CCCEEEEecCCcccccCCCCCCccC---HHHHHHHHhcCCCCeEEeCCCC
Confidence 0 0113345555555432 43344 2 3344331 111233 35677777777899866 55
Q ss_pred --------------------CCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 258 --------------------GISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 258 --------------------GIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+. .|++++..+.|.-=+=|+|.+-.
T Consensus 215 vp~~~~~~~~~~gg~~~~~~G~p-~e~i~~ai~~GV~KiNi~Tdl~~ 260 (307)
T 3n9r_A 215 IPDNVRKSYLDAGGDLKGSKGVP-FEFLQESVKGGINKVNTDTDLRI 260 (307)
T ss_dssp CCHHHHHHHHHTTCCCTTCBCCC-HHHHHHHHHTTEEEEEECHHHHH
T ss_pred cchHHHHHHHHhcCccCCCCCCC-HHHHHHHHHcCceEEEechHHHH
Confidence 776 79999999999888889987653
No 343
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=95.83 E-value=0.19 Score=48.07 Aligned_cols=141 Identities=11% Similarity=0.090 Sum_probs=92.4
Q ss_pred EEEEE-eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH-HHHHHHHHHhhccC--CC
Q 021527 65 LIPYI-TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF-NAILSMLKEVVPQM--SC 140 (311)
Q Consensus 65 li~yi-~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~-~~~~~~i~~ir~~~--~i 140 (311)
+-.|- +.+..+.+.+.+.++.+.+.|.+.+++-. .|+ | .++ +...+.++.+|+.+ ++
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~---spv--G--------------~~~~~~~~e~v~avr~a~G~d~ 194 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGW---GPI--G--------------RGTVAADADQIMAAREGLGPDG 194 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES---TTT--T--------------SSCHHHHHHHHHHHHHHHCSSS
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC---CCC--C--------------CCHHHHHHHHHHHHHHHhCCCC
Confidence 44453 33345678889999999999999999853 232 1 133 34456788887754 67
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
|+.+-. |.-+. ...+++.++.+.+.++|+..+- .|
T Consensus 195 ~l~vDa--n~~~~----------------------~~~~~a~~~~~~l~~~~i~~iE--qP------------------- 229 (401)
T 2hzg_A 195 DLMVDV--GQIFG----------------------EDVEAAAARLPTLDAAGVLWLE--EP------------------- 229 (401)
T ss_dssp EEEEEC--TTTTT----------------------TCHHHHHTTHHHHHHTTCSEEE--CC-------------------
T ss_pred eEEEEC--CCCCC----------------------CCHHHHHHHHHHHHhcCCCEEE--CC-------------------
Confidence 777643 31110 0235666666777777776441 11
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhh-cCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKE-SSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAM 282 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~-~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSai 282 (311)
++++..+.++++++ .+++||+.+-.+.++++++++++.| +|++.+--.-
T Consensus 230 -------------~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 230 -------------FDAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGR 280 (401)
T ss_dssp -------------SCTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHH
T ss_pred -------------CCccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcch
Confidence 11122456888888 8899999999999999999998665 7999885433
No 344
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.11 Score=52.12 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=73.6
Q ss_pred ChhhHHHHHHHHHHCC-----CCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-----cCCCcEEE
Q 021527 75 DLSTTAEALKLLDSCG-----SDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP-----QMSCPIAL 144 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~G-----aD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~-----~~~iPiil 144 (311)
+.+..++.++.+.+.| ||+|-+|...+.|-+...-.+.-. +.+...|+.+++ ..++||-+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl----------~RvvpvI~~i~~~~~~~~~~vpISI 316 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEI----------RRSIPLIKAIRESTELPQDKVILSI 316 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHH----------HHHHHHHHHHHHCSSSCGGGEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHH----------HHHHHHHHHHHhhccccCCCCeEEE
Confidence 6789999999999999 999999997777755433222222 234567777775 24789999
Q ss_pred EecCcchhccCHHHHHHHHHHcCCcEEEecCCChhh-HHHHHHHHHHc-CCCeEEE
Q 021527 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-TESLQKEAMKN-KIELVLF 198 (311)
Q Consensus 145 m~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-~~~~~~~~~~~-gi~~I~l 198 (311)
.+|- .+-++.+.++|+|- |.|+.-+. ..++.+.++++ |...|.+
T Consensus 317 DT~~--------a~VaeaAl~aGadI--INDVsg~~~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 317 DTYR--------SNVAKEAIKVGVDI--INDISGGLFDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp ECCC--------HHHHHHHHHTTCCE--EEETTTTSSCTTHHHHHHTCTTSEEEEE
T ss_pred eCCc--------HHHHHHHHHcCCCE--EEeCCCCcCChHHHHHHHHhCCCeEEEE
Confidence 8874 34677888899886 55554321 23466778899 9887776
No 345
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=95.78 E-value=0.04 Score=49.58 Aligned_cols=114 Identities=22% Similarity=0.214 Sum_probs=70.0
Q ss_pred HHHHHHHcCCcEEEec-CCC------hhhHHHHHHHHHHcCCCe-EEEeCCCChHHHHHHHHHh--CCceEEEEecCCcc
Q 021527 159 FMSTVRDIGIRGLVVP-DVP------LEETESLQKEAMKNKIEL-VLFTTPTTPTDRMKAIVEA--SEGFVYLVSSIGVT 228 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp------~ee~~~~~~~~~~~gi~~-I~lisp~t~~eri~~i~~~--a~gfiY~vs~~G~T 228 (311)
-++.+.+.|+|.|=+. ++. .+|...+++.|.++|+.+ +.+-+...+++.+...++. ..|..|+=+.+|.+
T Consensus 93 e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 93 EAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp HHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSS
T ss_pred HHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 4567888999988552 222 245666778888877632 1221211123444444443 35777776666654
Q ss_pred CCCCCCCchHHHHHHH--HhhcCCCcEEEeeCCCCHHHHHHHHHcCCc--EE
Q 021527 229 GARASISGHVQTLLRE--IKESSTKPVAVGFGISKPEHVQQVAGWGAD--GV 276 (311)
Q Consensus 229 G~~~~~~~~~~~~l~~--vk~~~~~Pv~vGfGIst~e~v~~v~~~GAD--Gv 276 (311)
+.. +... +-++. +++.+.+||-+.+||++.+++.++.++||+ |+
T Consensus 173 ~~~-gAt~---~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 173 TKG-GDPV---TVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAGADIIGT 220 (234)
T ss_dssp CCC-CSHH---HHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCC-CCCH---HHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcCccccch
Confidence 311 1111 22333 555545999999999999999999999999 76
No 346
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.78 E-value=0.2 Score=47.32 Aligned_cols=124 Identities=21% Similarity=0.268 Sum_probs=74.2
Q ss_pred HHHHHHHcCCcEEEe-----cCCChh-------hHHHHHHHHHHcCCCeEE--EeCCC-----Ch-------HHHHHHHH
Q 021527 159 FMSTVRDIGIRGLVV-----PDVPLE-------ETESLQKEAMKNKIELVL--FTTPT-----TP-------TDRMKAIV 212 (311)
Q Consensus 159 fi~~~~~aGadGvii-----pDlp~e-------e~~~~~~~~~~~gi~~I~--lisp~-----t~-------~eri~~i~ 212 (311)
.++.+++.|+|+|-+ ||-+.+ ...++.+.|+++|+.++. +.-|. .+ ++.+...+
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~ 194 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAM 194 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHH
Confidence 578899999998876 555532 366788999999999887 43232 11 12233333
Q ss_pred HhC--C--ce-EEEEecCCccCCCC---CC-------C-chHHHHHHHHhhcCCCcEE-EeeCCCCH---HHHHHHHHcC
Q 021527 213 EAS--E--GF-VYLVSSIGVTGARA---SI-------S-GHVQTLLREIKESSTKPVA-VGFGISKP---EHVQQVAGWG 272 (311)
Q Consensus 213 ~~a--~--gf-iY~vs~~G~TG~~~---~~-------~-~~~~~~l~~vk~~~~~Pv~-vGfGIst~---e~v~~v~~~G 272 (311)
+.. . |. ++-+. +||... ++ . .+..+.++++-+.+++|++ .++|.+.. +.++...++|
T Consensus 195 R~~~~~elGaDv~Kve---~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~~~~~fl~~v~~A~~aG 271 (332)
T 3iv3_A 195 KVFSAERFGIDVLKVE---VPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGVSAELFQETLVFAHKAG 271 (332)
T ss_dssp HHHTSGGGCCSEEEEC---CSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCcCCcEEEEe---cCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 332 1 33 33343 333221 00 1 1223446666677899965 69998632 2345556899
Q ss_pred C--cEEEEhhHhhch
Q 021527 273 A--DGVIVGSAMVKL 285 (311)
Q Consensus 273 A--DGvIVGSaiv~~ 285 (311)
| .||.+|=++-+.
T Consensus 272 a~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 272 AKFNGVLCGRATWAG 286 (332)
T ss_dssp CCCCEEEECHHHHTT
T ss_pred CCcceEEeeHHHHHh
Confidence 9 999999666554
No 347
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=95.77 E-value=0.55 Score=43.85 Aligned_cols=173 Identities=18% Similarity=0.234 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHCCCCEEEE-cCCCC-CCCC------ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe--
Q 021527 77 STTAEALKLLDSCGSDIIEL-GVPYS-DPLA------DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT-- 146 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IEl-G~Pfs-DP~a------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~-- 146 (311)
+...+.++.+.+.|+..|-| |+|-. |+.. ||++.+ .++.||+++.- +++++
T Consensus 64 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~g~v~r------------------air~iK~~~p~-l~vitDv 124 (328)
T 1w1z_A 64 DRAVEECKELYDLGIQGIDLFGIPEQKTEDGSEAYNDNGILQQ------------------AIRAIKKAVPE-LCIMTDV 124 (328)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCSSCCSSCGGGGCTTSHHHH------------------HHHHHHHHSTT-SEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCccccccCCCCChHHH------------------HHHHHHHHCCC-eEEEEee
Confidence 57999999999999998776 88752 3322 354433 45556654311 44442
Q ss_pred ----cCc----chhccC-H------HHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC--------
Q 021527 147 ----YYN----PILKRG-V------DNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT-------- 200 (311)
Q Consensus 147 ----Y~n----~i~~~g-~------~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis-------- 200 (311)
|.. .+...| + +...+. .+++|+|-|--.|+=.......++.+.++|...+...+
T Consensus 125 cLc~YT~HGHcGil~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASa 204 (328)
T 1w1z_A 125 ALDPFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDHSDVGILSYAAKYASS 204 (328)
T ss_dssp CSTTTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCT
T ss_pred ecccCCCCCceeeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhhh
Confidence 211 112223 1 223333 36799999876788777788899999999997555422
Q ss_pred ------------------------CCChHHHHHHHHH-hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE
Q 021527 201 ------------------------PTTPTDRMKAIVE-ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAV 255 (311)
Q Consensus 201 ------------------------p~t~~eri~~i~~-~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v 255 (311)
|....|-+++... ..+|...++=.- .+ ...+.|+++|+.+++|+++
T Consensus 205 fYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKP-------al--~YLDIir~vk~~~~~P~aa 275 (328)
T 1w1z_A 205 FYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKP-------GL--AYLDIVWRTKERFDVPVAI 275 (328)
T ss_dssp TCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEES-------CG--GGHHHHHHHHHHHCSCEEE
T ss_pred ccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEEEcC-------CC--chHHHHHHHHHhcCCCEEE
Confidence 3333454544433 245654443111 11 2468899999999999965
Q ss_pred ----e----------eCCCC-----HHHHHHHHHcCCcEEE
Q 021527 256 ----G----------FGISK-----PEHVQQVAGWGADGVI 277 (311)
Q Consensus 256 ----G----------fGIst-----~e~v~~v~~~GADGvI 277 (311)
| -|.-+ -|....++++|||++|
T Consensus 276 YqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~Ii 316 (328)
T 1w1z_A 276 YHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIF 316 (328)
T ss_dssp EECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEE
T ss_pred EEccHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEe
Confidence 0 12212 2344566788888876
No 348
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.76 E-value=0.61 Score=42.68 Aligned_cols=108 Identities=9% Similarity=0.091 Sum_probs=67.3
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCc-
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYN- 149 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n- 149 (311)
-.++.+...+.++.+.+.|+|+||+=+=|-+... ..+++.+.++.+|+.. ++|+++- +-.
T Consensus 47 ~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~-----------------~~~~v~~~l~~lr~~~~~~PiI~T-~Rt~ 108 (276)
T 3o1n_A 47 MGKTITDVKSEALAYREADFDILEWRVDHFANVT-----------------TAESVLEAAGAIREIITDKPLLFT-FRSA 108 (276)
T ss_dssp CCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTT-----------------CHHHHHHHHHHHHHHCCSSCEEEE-CCBG
T ss_pred CCCCHHHHHHHHHHHhhCCCCEEEEEeccccccC-----------------cHHHHHHHHHHHHHhcCCCCEEEE-EEEh
Confidence 3688899999999998899999999544322111 1245567788888776 7998764 221
Q ss_pred ---chhccCHH---HHHHHHHHcC-CcEEEe-cCCChhhHHHHHHHHHHcCCCeEE
Q 021527 150 ---PILKRGVD---NFMSTVRDIG-IRGLVV-PDVPLEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 150 ---~i~~~g~~---~fi~~~~~aG-adGvii-pDlp~ee~~~~~~~~~~~gi~~I~ 197 (311)
..+....+ +.++.+.+.| +|-+=+ -+.+.+...++.+.+++.|.++|.
T Consensus 109 ~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~ 164 (276)
T 3o1n_A 109 KEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIM 164 (276)
T ss_dssp GGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEE
Confidence 11222223 3555667778 777522 122323355666667888887664
No 349
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=95.75 E-value=0.63 Score=43.49 Aligned_cols=238 Identities=9% Similarity=0.097 Sum_probs=129.3
Q ss_pred hhHHHHHHHHHHHcCC-ccE-EEEEeCCCCC-hhhHH----HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHH
Q 021527 47 TVGLAETFTRLKKQGK-VAL-IPYITAGDPD-LSTTA----EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~-~~l-i~yi~~G~P~-~~~~~----e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~ 119 (311)
|+.+.+.+. +++ ..| .-++.|=... .+... +.++.|.+.+.|.+-+ |. ..+|.. ..-..|-..
T Consensus 1 ~~~l~~~~~----~~~~~~~SfE~fPPk~~~~~e~l~~~a~~~l~~l~~l~pdf~v~---Yg--a~g~s~-r~~~~rt~~ 70 (315)
T 3ijd_A 1 MSLLKQKIL----NRESGIITYGITPPKKNNTEEKIKEISQKHIERISGLDIDGLVI---YD--LQDEKE-RVSEERPFP 70 (315)
T ss_dssp --CHHHHHH----TTCSCCEEEEECCCBSSSCHHHHHHHHHHHHHHHHTSCCSEEEE---CC--CC--------------
T ss_pred ChhHHHHHh----cCCCceEEEEeeCcCCCccHHHHHHHHHHHHHHHHhCCCCEEEE---CC--CCCCCC-CCCCCCCcc
Confidence 445566654 343 333 3344444333 34555 4677999999999733 21 112211 000001000
Q ss_pred cCCCHHHHHHHHHHhhccCCCcEEEE-ecCcchhccCHHHHHHHHHHcCCcEEEecCCChhh-----HHHHHHHHHHcC-
Q 021527 120 RGTNFNAILSMLKEVVPQMSCPIALF-TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE-----TESLQKEAMKNK- 192 (311)
Q Consensus 120 ~G~~~~~~~~~i~~ir~~~~iPiilm-~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee-----~~~~~~~~~~~g- 192 (311)
.--|+ +..++++++++++++|.+.. +..| .-+-.+++.++.+++.|++.++-.|.|-++ .....+..++++
T Consensus 71 f~~T~-d~~~~~~~i~~~~gi~~v~Hltc~~-~t~~ei~~~L~~~~~~GI~niLRGDpp~~~~~~~~~~~A~~l~~~~~~ 148 (315)
T 3ijd_A 71 FIETI-DPQIYSENYLKDLKIPKIIYRCVGK-YTPDEFRRLTRPVSGQDAFSVFVGAASRNQSVLLKLSDAYKIRQDVNP 148 (315)
T ss_dssp CCCBC-CHHHHHHHHCTTSCSCEEEEEEGGG-SCHHHHHHHHSCCTTCCCEEEEECCCC----CCSCHHHHHHHHHHHCT
T ss_pred ccccc-cHHHHHHHHHHHhCCCceeeeeeCC-CCHHHHHHHHHHHHHcCCcEEecCCCCCCCCCCcCHHHHHHHHHhcCC
Confidence 00011 23457888998888886554 3222 112234566677888999999889977432 222233344443
Q ss_pred -CCeEEEeCCCC-h-----HHHHHHHHHhCCceEEEEecCCccCCCCCCC-chHHHHH----HHHhhc-C-CCcEEEeeC
Q 021527 193 -IELVLFTTPTT-P-----TDRMKAIVEASEGFVYLVSSIGVTGARASIS-GHVQTLL----REIKES-S-TKPVAVGFG 258 (311)
Q Consensus 193 -i~~I~lisp~t-~-----~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~-~~~~~~l----~~vk~~-~-~~Pv~vGfG 258 (311)
+..-.-..|.. + .+++++ +...|..|++|-. -.+ ....+++ +++|+. . ++||+.|.=
T Consensus 149 ~F~IGvA~yPe~H~~~~~d~~~Lk~--KvdAGAdf~ITQ~-------ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGIm 219 (315)
T 3ijd_A 149 DLLLGGVAIPERHMKNTDEHLRIID--KINKGCKYFITQA-------VYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLT 219 (315)
T ss_dssp TSEEEEEECGGGHHHHSCHHHHHHH--HHHTTCCEEEESC-------CCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEEC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHH--HHHCCCCEEEccc-------cCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEee
Confidence 33333345654 1 234332 3346766776522 233 3456677 455553 5 799999987
Q ss_pred -CCCHHHHHHHHHcCCcEEEEhhHhhchhhhcCC-chhHHHHHHHHHHHHHh
Q 021527 259 -ISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQS-PEEGLKELEKFAKSLKS 308 (311)
Q Consensus 259 -Ist~e~v~~v~~~GADGvIVGSaiv~~~~~~~~-~~~~~~~~~~~~~~l~~ 308 (311)
|.|..+++.+. + -|+-|=..+.+.++...+ .+.+++-..+++++|.+
T Consensus 220 Pi~s~k~~~f~~-~--~G~~IP~~l~~~l~~~~d~~~~Gi~~a~e~~~~L~~ 268 (315)
T 3ijd_A 220 PCGSTKTLEFMK-W--LGISIPRWLENDLMNCEDILNKSVSLSKSIFNELME 268 (315)
T ss_dssp CCCSHHHHHHHH-H--HTCCCCHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHh-c--CCCCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 78899987654 3 577788889998876443 35667777777777764
No 350
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=95.72 E-value=0.99 Score=42.90 Aligned_cols=214 Identities=12% Similarity=0.116 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH---
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF--- 124 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~--- 124 (311)
+.+.+.|+..++.+ -++-.|= -.+++...-++++.++.++.+|-=- ..|-. + ..-..|...
T Consensus 15 ~~~~~ll~~A~~~~-yAVpAfN---v~n~e~~~Avl~AAee~~sPvIlq~-------s~g~~-~----~~~g~~~~~~~~ 78 (358)
T 1dos_A 15 DDVQKVFQVAKENN-FALPAVN---CVGTDSINAVLETAAKVKAPVIVQF-------SNGGA-S----FIAGKGVKSDVP 78 (358)
T ss_dssp HHHHHHHHHHHHTT-CCEEEEE---CCSHHHHHHHHHHHHHHTCCEEEEE-------CHHHH-H----HHHCTTSCCCST
T ss_pred hHHHHHHHHHHHCC-ceEEEEe---eCCHHHHHHHHHHHHHhCCCEEEEC-------ChhHH-H----HhcCCCccccch
Confidence 45788888877665 4554454 3467888889999999999876432 11100 0 000001100
Q ss_pred --------HHHHHHHHHhhccCCCcEEEEec-CcchhccCHHHHHHHHHHc-----------CCcEEEe--cCCChhh--
Q 021527 125 --------NAILSMLKEVVPQMSCPIALFTY-YNPILKRGVDNFMSTVRDI-----------GIRGLVV--PDVPLEE-- 180 (311)
Q Consensus 125 --------~~~~~~i~~ir~~~~iPiilm~Y-~n~i~~~g~~~fi~~~~~a-----------GadGvii--pDlp~ee-- 180 (311)
-.+..+++.+.++.++||.|-.- .... - -.+++.+.++ |.+.+.+ ..+|+||
T Consensus 79 ~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~---~-~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~~p~eENI 154 (358)
T 1dos_A 79 QGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKK---L-LPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENI 154 (358)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG---G-HHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHH
T ss_pred hhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCc---c-HHHHHHHHHHHHHHHHhcccCCCceEeecCCCCCHHHHH
Confidence 01245677777778899998741 1110 0 1344444443 4899877 4688887
Q ss_pred --HHHHHHHHHHcCCCeEE----------EeC--------CCChHHHHHHHHHhCCceE---EE-E---ecCCcc-CCCC
Q 021527 181 --TESLQKEAMKNKIELVL----------FTT--------PTTPTDRMKAIVEASEGFV---YL-V---SSIGVT-GARA 232 (311)
Q Consensus 181 --~~~~~~~~~~~gi~~I~----------lis--------p~t~~eri~~i~~~a~gfi---Y~-v---s~~G~T-G~~~ 232 (311)
..++.+.+++.|+.+=- -+. --|.++...+..+...|.. .+ + +..|++ ....
T Consensus 155 ~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p 234 (358)
T 1dos_A 155 EICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNV 234 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCC
Confidence 67788889888763211 010 1144455555655422221 22 2 444544 1223
Q ss_pred CCCchHHHHHHHHhhc---------CCCcEEE--eeCCCCHHHHHHHHHcCCcEEEEhhHhhch
Q 021527 233 SISGHVQTLLREIKES---------STKPVAV--GFGISKPEHVQQVAGWGADGVIVGSAMVKL 285 (311)
Q Consensus 233 ~~~~~~~~~l~~vk~~---------~~~Pv~v--GfGIst~e~v~~v~~~GADGvIVGSaiv~~ 285 (311)
.++.+ .|+++++. +++|++. |.|+. .|++++..+.|.-=+=|+|.+-..
T Consensus 235 ~L~~~---~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~~-~e~i~~ai~~GV~KiNi~Tdl~~A 294 (358)
T 1dos_A 235 VLTPT---ILRDSQEYVSKKHNLPHNSLNFVFHGGSGST-AQEIKDSVSYGVVKMNIDTDTQWA 294 (358)
T ss_dssp CCCTH---HHHHHHHHHHHHHTCCTTCSCEEECSCTTCC-HHHHHHHHHTTEEEEEECHHHHHH
T ss_pred CcCHH---HHHHHHHHHHHHhCCCCCCCcEEEeCCCCCC-HHHHHHHHHCCCeEEEEcHHHHHH
Confidence 44544 44444442 5789866 66775 799999999998888888877543
No 351
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=95.71 E-value=1.2 Score=40.51 Aligned_cols=190 Identities=16% Similarity=0.101 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHH
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIL 128 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~ 128 (311)
.+.+.+.++.++++..|+ +-...|+.+...++++.+.. .++++++|.++-. ..||-+ +
T Consensus 18 ~~~~~l~~~~~~k~~~Li--VALD~~~~~~al~l~~~l~~-~v~~~KvG~~l~~--~~G~~~-----------------v 75 (260)
T 3eww_A 18 PVASKLLRLMQKKETNLC--LSADVSLARELLQLADALGP-SICMLKTHVDILN--DFTLDV-----------------M 75 (260)
T ss_dssp HHHHHHHHHHHHHTCCEE--EECCCSCHHHHHHHHHHHGG-GCSEEEECGGGCT--TCCHHH-----------------H
T ss_pred cHHHHHHHHHHhcCCCEE--EEeCCCCHHHHHHHHHHhCC-CceEEEEcHHHHH--HhCHHH-----------------H
Confidence 344444444433344454 33466899999999999865 5999999999832 235321 2
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHH-------HcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEEEeC
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVR-------DIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVLFTT 200 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~-------~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~lis 200 (311)
+.++++.+..+.+|++..-+.++- +-+..+. ..|+|.+.++-..-.+ ...+++..+..++.+..+.+
T Consensus 76 ~~L~~~a~~~g~~VflDlK~~DIp-----nTv~~a~~~a~~~~~~~ad~vTVha~~G~~~~~aa~~~~~~~~~gv~vLts 150 (260)
T 3eww_A 76 KELITLAKCHEFLIFENRKFADIG-----NTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAE 150 (260)
T ss_dssp HHHHHHHHHHTCEEEEEEEECSCH-----HHHHHHHHCTTTCGGGTCSEEEEESTTCTHHHHHHHHHHTTTTCEEEEECC
T ss_pred HHHHHHHhhcCCeEEEEeeccccH-----HHHHHHHHHHHHhhhccCCEEEEeCCCCHHHHHHHHHhhcccCCeEEEEEE
Confidence 233332222467888876554442 2233211 1479999886543233 33344443344555444443
Q ss_pred CCCh--------HHHHHHHHHhC-CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHH--------
Q 021527 201 PTTP--------TDRMKAIVEAS-EGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPE-------- 263 (311)
Q Consensus 201 p~t~--------~eri~~i~~~a-~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e-------- 263 (311)
-+.. .+...++++.. .|..=+|... + . + .-+-.+++--||+-..
T Consensus 151 ms~~g~l~~~~~~e~v~~~A~~~~~g~dGvV~s~-----~--~-----------~-~~~~f~~vTPGIr~~~~~~~~~~r 211 (260)
T 3eww_A 151 MSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGS-----R--V-----------S-MKPEFLHLTPGVQLEAGGDNLGQQ 211 (260)
T ss_dssp CCSTTCCCCTHHHHHHHHHHHHTTTTEEEEECSS-----C--C-----------C-CCTTSEEEECSBCSSSEECTTSCE
T ss_pred cCCchhcccCCHHHHHHHHHHhccCCCceEEeCh-----h--h-----------c-cCCCcEEECCCcCCCCCCCccCCC
Confidence 2211 13344444443 2333333211 0 0 0 1112345555664100
Q ss_pred --HHHHHH-HcCCcEEEEhhHhhc
Q 021527 264 --HVQQVA-GWGADGVIVGSAMVK 284 (311)
Q Consensus 264 --~v~~v~-~~GADGvIVGSaiv~ 284 (311)
+..++. +.|||-+|||+.|++
T Consensus 212 ~~tp~~a~~~aGad~iVvGR~I~~ 235 (260)
T 3eww_A 212 YNSPQEVIGKRGSDIIIVGRGIIS 235 (260)
T ss_dssp EBCHHHHHTTSCCSEEEESHHHHT
T ss_pred ccCHHHHHHhcCCCEEEEChhhcC
Confidence 244566 799999999999998
No 352
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=95.67 E-value=0.19 Score=47.97 Aligned_cols=135 Identities=12% Similarity=0.058 Sum_probs=92.2
Q ss_pred cEEEEEeC-CC--CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--C
Q 021527 64 ALIPYITA-GD--PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--M 138 (311)
Q Consensus 64 ~li~yi~~-G~--P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~ 138 (311)
.+-.|.+. |+ .+.+.+.+.++.+.+.|.|.+++-+ ..+ +++..++.++.+|+. .
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~------g~~---------------~~~~~~e~v~avR~avg~ 206 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKV------GQP---------------DGALDIARVTAVRKHLGD 206 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEC------CCS---------------CHHHHHHHHHHHHHHHCT
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEec------CCC---------------CHHHHHHHHHHHHHHcCC
Confidence 34456553 33 3778899999999999999999942 111 234446677888875 3
Q ss_pred CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 139 SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
++|+.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 207 d~~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--~P----------------- 241 (393)
T 2og9_A 207 AVPLMVDA--NQ------------------------QWDRPTAQRMCRIFEPFNLVWIE--EP----------------- 241 (393)
T ss_dssp TSCEEEEC--TT------------------------CCCHHHHHHHHHHHGGGCCSCEE--CC-----------------
T ss_pred CCEEEEEC--CC------------------------CCCHHHHHHHHHHHHhhCCCEEE--CC-----------------
Confidence 67777642 21 12346777777777777776441 11
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
+++...+..+++++.+++||+.+-.+.++++++++++.| +|.+.+-
T Consensus 242 ---------------~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 242 ---------------LDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp ---------------SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred ---------------CCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 111224568888888899999999999999999998776 7888764
No 353
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=95.66 E-value=0.24 Score=47.17 Aligned_cols=184 Identities=13% Similarity=0.146 Sum_probs=102.3
Q ss_pred CccEEEEEeC----CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc
Q 021527 62 KVALIPYITA----GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ 137 (311)
Q Consensus 62 ~~~li~yi~~----G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~ 137 (311)
+..+.+.+|| |.-|.+.+.+.++.+.++|+|.|-+.--- -+++. .+.++-.++++.+.+.
T Consensus 61 ~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTT----GE~~~------------Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 61 LRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTT----GEGQL------------MSWDEHIMLIGHTVNC 124 (360)
T ss_dssp CCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGG------------SCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccc----cChhh------------CCHHHHHHHHHHHHHH
Confidence 3444455555 45667899999999999999999884111 11211 3445555566555543
Q ss_pred --CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecC-----CChhhHHHHHHHHHHcCCCeEEEeC-----CCChH
Q 021527 138 --MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPD-----VPLEETESLQKEAMKNKIELVLFTT-----PTTPT 205 (311)
Q Consensus 138 --~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipD-----lp~ee~~~~~~~~~~~gi~~I~lis-----p~t~~ 205 (311)
-++||+.-+-.|... ..-+..+.+.++|+|++++.- ...++..++.+.+.+. +..+++=. -+.+.
T Consensus 125 ~~grvpViaGvg~~st~--eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a-~PiilYNiP~rTg~~ls~ 201 (360)
T 4dpp_A 125 FGGSIKVIGNTGSNSTR--EAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM-GPTIIYNVPGRTGQDIPP 201 (360)
T ss_dssp HTTTSEEEEECCCSSHH--HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG-SCEEEEECHHHHSCCCCH
T ss_pred hCCCCeEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCEEEEeCCcccCCCCCH
Confidence 468988866544221 123566778899999988841 1235555555555444 45444322 23344
Q ss_pred HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHH-HHHHHcCCcEEEEhhHh
Q 021527 206 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHV-QQVAGWGADGVIVGSAM 282 (311)
Q Consensus 206 eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v-~~v~~~GADGvIVGSai 282 (311)
+-+.++++ -..++.+=. .+|. .. +.+... .+..|+.|.. +.. ...+..|+||+|-|++=
T Consensus 202 e~l~~La~-~pnIvGIKd---ssgd--------~~-i~~~~~-~~f~v~sG~D----~~~l~~~l~~Ga~G~Is~~aN 261 (360)
T 4dpp_A 202 RAIFKLSQ-NPNLAGVKE---CVGN--------KR-VEEYTE-NGVVVWSGND----DECHDSRWDYGATGVISVTSN 261 (360)
T ss_dssp HHHHHHTT-STTEEEEEE---CSCH--------HH-HHHHHH-TTCCEEECCG----GGHHHHHHHSCCCEEEESGGG
T ss_pred HHHHHHhc-CCCEEEEEe---CCCc--------HH-HHHhhC-CCEEEEeCCh----HHHHHHHHHcCCCEEEccchh
Confidence 66666653 344554411 1121 11 222221 2455655542 223 33466899999988753
No 354
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=95.62 E-value=0.4 Score=44.00 Aligned_cols=172 Identities=16% Similarity=0.100 Sum_probs=98.9
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+++..+- |+.-+-.|..
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~------------~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t 77 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTT----GLGP------------SLSPEEKLENLKAVYDVTNK-IIFQVGGLNL 77 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTT----TTGG------------GSCHHHHHHHHHHHHTTCSC-EEEECCCSCH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHcCC-EEEecCCCCH
Confidence 55677899999999999999999884111 0111 14556667788877766544 5544433322
Q ss_pred hccCHHHHHHHHHHcCCcEEEe--cC----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCceE
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVV--PD----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGvii--pD----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gfi 219 (311)
. ..-+..+.+.++|+|++++ |- ...++..+ |...+...++..+++=.| +.+.+-+.+ -..++
T Consensus 78 ~--~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~----~pnIv 151 (293)
T 1w3i_A 78 D--DAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE----IGCFT 151 (293)
T ss_dssp H--HHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH----HCCEE
T ss_pred H--HHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh----cCCEE
Confidence 1 1234666778899999988 32 22344444 455666678876665333 223344333 23443
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.+=. .+| ++ ..+.++++. .+.-|+.|..- .+-..+..|+||+|-|++
T Consensus 152 giKd---s~g-------d~-~~~~~~~~~~~~f~v~~G~d~----~~~~~l~~G~~G~is~~a 199 (293)
T 1w3i_A 152 GVKD---TIE-------NI-IHTLDYKRLNPNMLVYSGSDM----LIATVASTGLDGNVAAGS 199 (293)
T ss_dssp EEEE---CCS-------CH-HHHHHHHHHCTTSEEEECCST----THHHHHHTTCCEEECGGG
T ss_pred EEEe---CCC-------CH-HHHHHHHhcCCCEEEEEccHH----HHHHHHHcCCCEEEeCHH
Confidence 3311 111 12 234444431 24556666543 345566789999999876
No 355
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.57 E-value=1.2 Score=42.13 Aligned_cols=211 Identities=16% Similarity=0.177 Sum_probs=114.9
Q ss_pred EEEeCCCC---ChhhHHHHHHHHHHCCCCEEEEcCCC--CCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 67 PYITAGDP---DLSTTAEALKLLDSCGSDIIELGVPY--SDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 67 ~yi~~G~P---~~~~~~e~~~~L~~~GaD~IElG~Pf--sDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
+|+.+|-- +.+...+.++.+.++|+|++=++.-- +.|+. -.|.. ++.++++++.+++.++|
T Consensus 107 ~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~-------------f~glg-~egl~~l~~~~~e~Gl~ 172 (350)
T 1vr6_A 107 FTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYS-------------FQGLG-EKGLEYLREAADKYGMY 172 (350)
T ss_dssp EEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTS-------------CCCCT-HHHHHHHHHHHHHHTCE
T ss_pred eEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHh-------------hcCCC-HHHHHHHHHHHHHcCCc
Confidence 45544422 45789999999999999998776433 22211 11222 46688889999899999
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCC-hHHHHHH----HHHhC-
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTT-PTDRMKA----IVEAS- 215 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t-~~eri~~----i~~~a- 215 (311)
++--. +++ .-++.+.+. +|.+-|+--..+... +..++.+.|. +|.+-+..+ +.+.+.. +.+..
T Consensus 173 ~~te~-~d~-------~~~~~l~~~-vd~lkIgAr~~~n~~-LL~~va~~~k-PVilk~G~~~tl~ei~~Ave~i~~~GN 241 (350)
T 1vr6_A 173 VVTEA-LGE-------DDLPKVAEY-ADIIQIGARNAQNFR-LLSKAGSYNK-PVLLKRGFMNTIEEFLLSAEYIANSGN 241 (350)
T ss_dssp EEEEC-SSG-------GGHHHHHHH-CSEEEECGGGTTCHH-HHHHHHTTCS-CEEEECCTTCCHHHHHHHHHHHHHTTC
T ss_pred EEEEe-CCH-------HHHHHHHHh-CCEEEECcccccCHH-HHHHHHccCC-cEEEcCCCCCCHHHHHHHHHHHHHCCC
Confidence 87732 231 123334444 888888743333333 4445556674 566666554 3333222 22222
Q ss_pred CceEEEEecCCcc---CC-CCCCCchHHHHHHHHhhcCCCcEEE----eeCCCC--HHHHHHHHHcCCcEEEEhhHhhc-
Q 021527 216 EGFVYLVSSIGVT---GA-RASISGHVQTLLREIKESSTKPVAV----GFGISK--PEHVQQVAGWGADGVIVGSAMVK- 284 (311)
Q Consensus 216 ~gfiY~vs~~G~T---G~-~~~~~~~~~~~l~~vk~~~~~Pv~v----GfGIst--~e~v~~v~~~GADGvIVGSaiv~- 284 (311)
..++.|. .|++ +. +..++- ..+..+|+.+++||++ +.|-+. +.-.......||||++|=+-+.-
T Consensus 242 ~~viLce--RG~~typ~~~~~~vdl---~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd 316 (350)
T 1vr6_A 242 TKIILCE--RGIRTFEKATRNTLDI---SAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPE 316 (350)
T ss_dssp CCEEEEE--CCBCCSCCSSSSBCCT---THHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGG
T ss_pred CeEEEEe--CCCCCCCCcChhhhhH---HHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcc
Confidence 2344442 1221 11 222222 3467788878899765 224321 23233445689999999876542
Q ss_pred -hhhhcCCchhHHHHHHHHHHHHHh
Q 021527 285 -LLGEAQSPEEGLKELEKFAKSLKS 308 (311)
Q Consensus 285 -~~~~~~~~~~~~~~~~~~~~~l~~ 308 (311)
.+.++.. .-..+++++++++++.
T Consensus 317 ~al~D~~~-sL~p~e~~~lv~~ir~ 340 (350)
T 1vr6_A 317 KALSDGKQ-SLDFELFKELVQEMKK 340 (350)
T ss_dssp GCSSCGGG-CBCHHHHHHHHHHHHH
T ss_pred cCCCchhh-cCCHHHHHHHHHHHHH
Confidence 2222110 0114566777666654
No 356
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=95.57 E-value=0.16 Score=47.87 Aligned_cols=135 Identities=13% Similarity=0.108 Sum_probs=88.4
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPI 142 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPi 142 (311)
+-.|.+.|..+.+.+.+.++.+.+.|.+.+.+-+- .+.+.-.+.++.+|+.+ ++|+
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g----------------------~~~~~~~e~v~avr~a~g~~~~l 188 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVG----------------------TNVKEDVKRIEAVRERVGNDIAI 188 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECC----------------------SCHHHHHHHHHHHHHHHCTTSEE
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeC----------------------CCHHHHHHHHHHHHHHhCCCCeE
Confidence 33444545456678889999999999999998421 12344456777777754 5777
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHH-HHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE-SLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~-~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
.+-. |.- +..+++. ++.+.+.++|+..+- .
T Consensus 189 ~vDa--n~~------------------------~~~~~a~~~~~~~l~~~~i~~iE--q--------------------- 219 (369)
T 2p8b_A 189 RVDV--NQG------------------------WKNSANTLTALRSLGHLNIDWIE--Q--------------------- 219 (369)
T ss_dssp EEEC--TTT------------------------TBSHHHHHHHHHTSTTSCCSCEE--C---------------------
T ss_pred EEEC--CCC------------------------CCHHHHHHHHHHHHHhCCCcEEE--C---------------------
Confidence 5532 311 1124555 565566666665331 1
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhH
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSA 281 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSa 281 (311)
.++++..+.++++++.+++||+.+-.+.++++++++++.| +|++.+--.
T Consensus 220 -----------P~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 220 -----------PVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp -----------CBCTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred -----------CCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 1122224568888888899999999999999999998755 799988543
No 357
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.56 E-value=1.5 Score=40.77 Aligned_cols=203 Identities=16% Similarity=0.221 Sum_probs=129.5
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+.+.|+..++.| -++-.|= -.+++...-++++.++.+..+|-=. ..|- +.-+ | .+.+..
T Consensus 5 ~~~ll~~A~~~~-yAV~AfN---v~n~e~~~Ail~AAee~~sPvIlq~-------s~g~-~~y~-------g--~~~~~~ 63 (305)
T 1rvg_A 5 GLEILKKAREEG-YGVGAFN---VNNMEFLQAVLEAAEEQRSPVILAL-------SEGA-MKYG-------G--RALTLM 63 (305)
T ss_dssp HHHHHHHHHHHT-CCEEEEE---CCSHHHHHHHHHHHHHTTCCEEEEE-------EHHH-HHHH-------H--HHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEe---eCCHHHHHHHHHHHHHhCCCEEEEC-------ChhH-HhhC-------C--HHHHHH
Confidence 466777766554 4554454 4567899999999999999876442 1121 1111 1 223345
Q ss_pred HHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe--cCCChhh----HHHHHHHHHHcCCCeEE----E-
Q 021527 130 MLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV--PDVPLEE----TESLQKEAMKNKIELVL----F- 198 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii--pDlp~ee----~~~~~~~~~~~gi~~I~----l- 198 (311)
+++...+ .++||.+-. -+..-.+.+..|.+.|.+.+.+ ..+|+|| ..++.+.++++|+.+=- +
T Consensus 64 ~v~~~a~-~~VPValHl-----DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vg 137 (305)
T 1rvg_A 64 AVELAKE-ARVPVAVHL-----DHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLA 137 (305)
T ss_dssp HHHHHHH-CSSCEEEEE-----EEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred HHHHHHh-CCCcEEEEC-----CCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 6666666 899998863 1222246788899999999988 4688887 67788889988863210 0
Q ss_pred -------eC----CCChHHHHHHHHHhCCceEEE-E---ecCCccC--CCCCCCchHHHHHHHHhhcCCCcEEE--ee--
Q 021527 199 -------TT----PTTPTDRMKAIVEASEGFVYL-V---SSIGVTG--ARASISGHVQTLLREIKESSTKPVAV--GF-- 257 (311)
Q Consensus 199 -------is----p~t~~eri~~i~~~a~gfiY~-v---s~~G~TG--~~~~~~~~~~~~l~~vk~~~~~Pv~v--Gf-- 257 (311)
.. --|.++..++..+.. |.+.+ + +..|.+- ....++ .+.|+++++.+++|++. |.
T Consensus 138 g~Ed~~~~~~~~~~yT~Peea~~Fv~~T-gvD~LAvaiGt~HG~Yk~~g~p~L~---~~~L~~I~~~~~vpLVlHGgSsv 213 (305)
T 1rvg_A 138 GIEEHVAVDEKDALLTNPEEARIFMERT-GADYLAVAIGTSHGAYKGKGRPFID---HARLERIARLVPAPLVLHGASAV 213 (305)
T ss_dssp CSCC------CCTTCCCHHHHHHHHHHH-CCSEEEECSSCCSSSBCSSSSCCCC---HHHHHHHHHHCCSCEEECSCCCC
T ss_pred CccCCccccccccccCCHHHHHHHHHHH-CCCEEEEecCccccccCCCCCCccC---HHHHHHHHHhcCCCEEEeCCCCC
Confidence 00 114445555555532 44444 2 3444332 111222 36788998988999876 66
Q ss_pred -------------------CCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 258 -------------------GISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 258 -------------------GIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
|+. .|++++..+.|.-=+=|+|.+-.
T Consensus 214 ~~~~~~~~~~~gg~~~~~~G~p-~e~i~~ai~~GV~KiNi~Tdl~~ 258 (305)
T 1rvg_A 214 PPELVERFRASGGEIGEAAGIH-PEDIKKAISLGIAKINTDTDLRL 258 (305)
T ss_dssp CHHHHHHHHHTTCCCCSCBCCC-HHHHHHHHHTTEEEEEECHHHHH
T ss_pred cHHHHHHHHhhccccccCCCCC-HHHHHHHHHCCCeEEEEChHHHH
Confidence 775 79999999999888888887743
No 358
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=95.54 E-value=0.59 Score=45.52 Aligned_cols=184 Identities=14% Similarity=0.140 Sum_probs=103.3
Q ss_pred HHHHHHHHCCCCEEEEc---CC-----CCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--------------
Q 021527 81 EALKLLDSCGSDIIELG---VP-----YSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-------------- 138 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG---~P-----fsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-------------- 138 (311)
-.++.++++|.+.|=+. +- .+.++-|+ .-.+.+++++.+++|...+
T Consensus 76 ~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~------------~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~ 143 (429)
T 1f8m_A 76 NMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQ------------SLYPANSVPQVVRRINNALQRADQIAKIEGDTS 143 (429)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHCCTTCCCCCSS------------SCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHcCCCEEEechHHHhcccccccCCCCCc------------ccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 34555667899999883 11 13344443 1245556666666665432
Q ss_pred ----CCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEecCC----------------ChhhH-HHHHHH---HHHc
Q 021527 139 ----SCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVPDV----------------PLEET-ESLQKE---AMKN 191 (311)
Q Consensus 139 ----~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviipDl----------------p~ee~-~~~~~~---~~~~ 191 (311)
.+||++. ||-|+. .+.+.++.+.++|+.|+.+=|- |.+|. .+++.. ....
T Consensus 144 ~~d~~~PIiaD~DtGfG~~~---nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~ 220 (429)
T 1f8m_A 144 VENWLAPIVADGEAGFGGAL---NVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVA 220 (429)
T ss_dssp CSCSSCCEEEECTTTTSSHH---HHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEECCCCCCCcH---HHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhc
Confidence 4999998 466654 2567888999999999999763 33453 233322 2235
Q ss_pred CCCeEEEeC-C--------------------------------CChH---HHHHHHHHhCCceEEEEecCCccCCCCCCC
Q 021527 192 KIELVLFTT-P--------------------------------TTPT---DRMKAIVEASEGFVYLVSSIGVTGARASIS 235 (311)
Q Consensus 192 gi~~I~lis-p--------------------------------~t~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~ 235 (311)
|.+.++..= . .--+ +|.+.+++ .-..+|+.+ |. ...
T Consensus 221 g~d~vIiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~-----~~--~~~ 292 (429)
T 1f8m_A 221 DVPTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMET-----GT--PDL 292 (429)
T ss_dssp TCCCEEEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECC-----SS--CCH
T ss_pred CCCEEEEEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCC-----CC--CCH
Confidence 777665431 1 1112 35555544 334456542 11 123
Q ss_pred chHHHHHHHHhhcCCCcEEEeeC---CC-----CHHH----HHHHHHcCCcEEEEhhHhhchhh
Q 021527 236 GHVQTLLREIKESSTKPVAVGFG---IS-----KPEH----VQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 236 ~~~~~~l~~vk~~~~~Pv~vGfG---Is-----t~e~----v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.++.++.+.++......+++..+ .+ +.++ ..++.++|..-++++.+..+...
T Consensus 293 eei~~f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~raa~ 356 (429)
T 1f8m_A 293 EAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFHALN 356 (429)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHHHHHHH
T ss_pred HHHHHHHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHHcCCeEEEECcHHHHHHH
Confidence 34566666666533332334322 11 1111 46788899999999999887553
No 359
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=95.52 E-value=0.28 Score=46.43 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=34.6
Q ss_pred HHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhhc
Q 021527 241 LLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMVK 284 (311)
Q Consensus 241 ~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv~ 284 (311)
+.+++|+.+..|+++| |+.+++++.++++.| ||.|-+|-.++.
T Consensus 277 ~a~~ik~~~~~~v~~~-g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 277 LSPEIRKVFKPPLVLN-QDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp CHHHHHHHCCSCEEEE-SSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred HHHHHHHhcCCcEEEe-CCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 3556677777888776 566799999999988 899999988775
No 360
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.50 E-value=0.25 Score=48.36 Aligned_cols=68 Identities=22% Similarity=0.243 Sum_probs=47.7
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
.++++.+.+..-..+.+.+ ++. -.....+.++++++.+ ++|++ ++||.+.++++.+.++|||++.||.
T Consensus 235 ~~~a~~l~~~G~d~ivi~~----a~g---~~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDT----AHG---HSAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHTCSEEEECC----SCT---TCHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHcCCCeEEEee----ecC---cchhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 4666666565333333221 221 1234567889999887 89997 6677889999999999999999983
No 361
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.48 E-value=0.43 Score=45.40 Aligned_cols=42 Identities=33% Similarity=0.445 Sum_probs=36.5
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.+.++.+|+.+++||++- |+.++|+++.+.++|+|+++|...
T Consensus 218 ~~~i~~lr~~~~~PvivK-~v~~~e~a~~a~~~Gad~I~vs~~ 259 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVK-GIQHPEDADMAIKRGASGIWVSNH 259 (368)
T ss_dssp HHHHHHHHHHSSSCEEEE-EECSHHHHHHHHHTTCSEEEECCG
T ss_pred HHHHHHHHHHcCCCEEEE-cCCCHHHHHHHHHcCCCEEEEcCC
Confidence 456999999899999987 568899999999999999999543
No 362
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.48 E-value=0.075 Score=50.74 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHc-------CCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCC-CCCC------------CChH
Q 021527 49 GLAETFTRLKKQ-------GKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPY-SDPL------------ADGP 108 (311)
Q Consensus 49 ~i~~~f~~~~~~-------~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~Pf-sDP~------------aDGp 108 (311)
.+.+.+..+++. .+..++.=+.++. +.+++.++++.++++|+|.|.+-+-. +.+. ..|+
T Consensus 200 ~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~-~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~ 278 (367)
T 3zwt_A 200 ELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL-TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGK 278 (367)
T ss_dssp HHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC-CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEG
T ss_pred HHHHHHHHHHHHHhhccccCCceEEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCc
Confidence 345555554432 2345555565543 34688999999999999999984332 1111 1233
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 109 VIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 109 ~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
.+... -+++++++++.+ ++||+..|-.. . .+.+.++.++|+|+|.+.
T Consensus 279 ~i~p~-------------a~~~v~~i~~~v~~~ipvI~~GGI~-----s-~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 279 PLRDL-------------STQTIREMYALTQGRVPIIGVGGVS-----S-GQDALEKIRAGASLVQLY 327 (367)
T ss_dssp GGHHH-------------HHHHHHHHHHHTTTCSCEEEESSCC-----S-HHHHHHHHHHTCSEEEES
T ss_pred ccchh-------------HHHHHHHHHHHcCCCceEEEECCCC-----C-HHHHHHHHHcCCCEEEEC
Confidence 33221 246888888887 89999976321 1 234555556899999884
No 363
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=95.47 E-value=0.57 Score=45.85 Aligned_cols=225 Identities=14% Similarity=0.084 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
..+.+.+++.++.+..++.. + +-.+++.+.-++++.++.+..+|----+-.=.+ .|.. .|.+.+.+
T Consensus 6 ~~mkelL~~ak~g~~~gi~a-v--~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~-~gGY----------tG~~p~~f 71 (450)
T 3txv_A 6 NHLIDIARWSERPGPRGIPS-I--CSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQ-DGGY----------TGMTPEDF 71 (450)
T ss_dssp ---------------CCEEE-E--CCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCT-TCTT----------TTCCHHHH
T ss_pred cCHHHHHHHHHhCCCcEEEE-e--CcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhh-cCCC----------CCCCHHHH
Confidence 34667776655422233322 2 336778888888888888877653321110000 1110 13455677
Q ss_pred HHHHHHhhccCCCcE---EEEe---cCcchhccCH-------HHHHHHHHHcCCcEEEe--cCCChhh------------
Q 021527 128 LSMLKEVVPQMSCPI---ALFT---YYNPILKRGV-------DNFMSTVRDIGIRGLVV--PDVPLEE------------ 180 (311)
Q Consensus 128 ~~~i~~ir~~~~iPi---ilm~---Y~n~i~~~g~-------~~fi~~~~~aGadGvii--pDlp~ee------------ 180 (311)
..+++++.++.++|+ +|-+ --|+.-..+. .+.+..+.++|...|.+ .-+|+||
T Consensus 72 ~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~r 151 (450)
T 3txv_A 72 TRFVGAIADRIEFPREKILLGGDHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGEPTALPDATTAAR 151 (450)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHH
T ss_pred HHHHHHHHHHcCcCcccEEEECCCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhhccchhHHHHHHH
Confidence 788888887788884 5542 1111111111 46888899999999988 2344443
Q ss_pred HHHHHHHHHHc----CCC-eEEEe-----------------CCCChHHHHHHHHH-------hC-----CceEEEEecCC
Q 021527 181 TESLQKEAMKN----KIE-LVLFT-----------------TPTTPTDRMKAIVE-------AS-----EGFVYLVSSIG 226 (311)
Q Consensus 181 ~~~~~~~~~~~----gi~-~I~li-----------------sp~t~~eri~~i~~-------~a-----~gfiY~vs~~G 226 (311)
..++.+.+.+. |.. +...+ ..|+|++-.+-+.. .+ ...+.++--.|
T Consensus 152 taeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpG 231 (450)
T 3txv_A 152 AARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPG 231 (450)
T ss_dssp HHHHHHHHHHTC------CCEEEEECC-------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCS
T ss_pred HHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCC
Confidence 44566777764 332 12211 23555443322221 11 22234432222
Q ss_pred c-cCCCCCCCchHHHHHHHHhhcC-CCc-EEE--ee--CCCCHHHHHHHHHcCCcEEEEhhHhhchhhh
Q 021527 227 V-TGARASISGHVQTLLREIKESS-TKP-VAV--GF--GISKPEHVQQVAGWGADGVIVGSAMVKLLGE 288 (311)
Q Consensus 227 ~-TG~~~~~~~~~~~~l~~vk~~~-~~P-v~v--Gf--GIst~e~v~~v~~~GADGvIVGSaiv~~~~~ 288 (311)
+ .|. ...+.--.+.+++|++.+ +.| ++. |. |+ +.++++++.+.|.--+=||+++...+.+
T Consensus 232 t~f~~-~~v~~y~~e~~~~L~~~v~~~P~LVlhghStDy~-~~e~l~~~V~~GiaklNVgp~Lt~a~re 298 (450)
T 3txv_A 232 VEFGN-ENVIAYDRARAEKLSATLGQLHGMVFEAHSTDYQ-TPDALRELVADGFAILKVGPGLTFALRE 298 (450)
T ss_dssp CEECS-SCEECCCTTTTSHHHHGGGTSTTCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred cccCC-CCCCCCCHHHHHHHHHHhccCCCEEEecCCCCCC-CHHHHHHHHHcCCcEEEEChHHHHHHHH
Confidence 1 111 111111124577777776 778 766 55 56 5899999999999999999999987654
No 364
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=95.45 E-value=0.38 Score=45.29 Aligned_cols=132 Identities=7% Similarity=-0.029 Sum_probs=90.0
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
..+-.|.+.|..+.+.+.+.++.+.+.|.+.+++-+- .+.+..++.++.+|+.+ ++
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g----------------------~~~~~~~e~v~avr~a~g~~~ 191 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKIS----------------------GEPVTDAKRITAALANQQPDE 191 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECC----------------------SCHHHHHHHHHHHTTTCCTTC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecC----------------------CCHHHHHHHHHHHHHhcCCCC
Confidence 3455677766667788999999999999999998421 12344567888888865 56
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHH-HHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEA-MKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~-~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
|+.+-. |.- +..+++.++.+.+ .++|+ .+- .|
T Consensus 192 ~l~vDa--n~~------------------------~~~~~a~~~~~~l~~~~~i-~iE--~P------------------ 224 (371)
T 2ps2_A 192 FFIVDA--NGK------------------------LSVETALRLLRLLPHGLDF-ALE--AP------------------ 224 (371)
T ss_dssp EEEEEC--TTB------------------------CCHHHHHHHHHHSCTTCCC-EEE--CC------------------
T ss_pred EEEEEC--CCC------------------------cCHHHHHHHHHHHHhhcCC-cCc--CC------------------
Confidence 665532 210 1235555555555 55554 320 01
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++ + .+.++++++.+++||+.+-.+.++++++++++.| +|.+.+-
T Consensus 225 --------------~~-~-~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 225 --------------CA-T-WRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp --------------BS-S-HHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred --------------cC-C-HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 11 1 3568888888899999999999999999998766 7999884
No 365
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.37 E-value=0.29 Score=43.56 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeE-----------EEeCCCChHHHHHHHHHhCCceEEEEecC
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV-----------LFTTPTTPTDRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I-----------~lisp~t~~eri~~i~~~a~gfiY~vs~~ 225 (311)
.++.+.+.+.|+.|+.+.. +++..+.+ +..++..+ ++++|+ .+.+.+..+..-.+|.+.+..
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~--~~~i~~ir---~~v~~Pvig~~k~d~~~~~~~I~~~--~~~i~~~~~~Gad~V~l~~~~ 111 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEG--IDNLRMTR---SLVSVPIIGIIKRDLDESPVRITPF--LDDVDALAQAGAAIIAVDGTA 111 (232)
T ss_dssp HHHHHHHHHTTCSEEEEES--HHHHHHHH---TTCCSCEEEECBCCCSSCCCCBSCS--HHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHHCCCeEEEECC--HHHHHHHH---HhcCCCEEEEEeecCCCcceEeCcc--HHHHHHHHHcCCCEEEECccc
Confidence 4577788999999998853 23333322 33455544 234453 345555555555555443211
Q ss_pred CccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 226 GVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
. ..|..+.++++++++. ++++ ...+++.++++++.+.|||.+.+
T Consensus 112 ----~--~~p~~l~~~i~~~~~~-g~~v--~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 112 ----R--QRPVAVEALLARIHHH-HLLT--MADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp ----S--CCSSCHHHHHHHHHHT-TCEE--EEECCSHHHHHHHHHTTCSEEEC
T ss_pred ----c--CCHHHHHHHHHHHHHC-CCEE--EEeCCCHHHHHHHHhCCCCEEEE
Confidence 1 1134567888888875 5554 44789999999999999998865
No 366
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=95.36 E-value=0.12 Score=46.68 Aligned_cols=168 Identities=10% Similarity=0.116 Sum_probs=88.7
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchh
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPIL 152 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~ 152 (311)
+.+.++..+..+...+.|++.+=+- |. .+. .+++.-+..++++..-.-| |.-
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV~-p~--------~v~------------------~a~~~L~~s~v~v~tVigF-P~G 90 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCVN-PT--------WVP------------------LCAELLKGTGVKVCTVIGF-PLG 90 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC-GG--------GHH------------------HHHHHHTTSSCEEEEEEST-TTC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEC-HH--------HHH------------------HHHHHhCCCCCeEEEEecc-CCC
Confidence 4556777777788888899988873 22 111 2222112334444322211 111
Q ss_pred ccCHH---HHHHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CC
Q 021527 153 KRGVD---NFMSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SE 216 (311)
Q Consensus 153 ~~g~~---~fi~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~ 216 (311)
....+ .-++.+.+.|+|-|=+. ++. .+|...+++.|...-+++|+=... .+++.+.+.++. ..
T Consensus 91 ~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~a 169 (239)
T 3ngj_A 91 ATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY-LTNEEKVEVCKRCVAA 169 (239)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG-SCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC-CCHHHHHHHHHHHHHH
Confidence 11112 23456788899987542 221 133455566664322333321111 223444444333 23
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCc
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGAD 274 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GAD 274 (311)
|..|+=+++|.+.. +... +-++.+|+. .+++|-+.+||++.+++.+++++||+
T Consensus 170 GADfVKTSTGf~~g--gAt~---~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~ 224 (239)
T 3ngj_A 170 GAEYVKTSTGFGTH--GATP---EDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGAS 224 (239)
T ss_dssp TCSEEECCCSSSSC--CCCH---HHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEE
T ss_pred CcCEEECCCCCCCC--CCCH---HHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhccc
Confidence 66677666564311 1122 223333433 36899999999999999999999999
No 367
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=95.35 E-value=0.54 Score=44.65 Aligned_cols=78 Identities=8% Similarity=-0.032 Sum_probs=48.8
Q ss_pred HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHH
Q 021527 81 EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFM 160 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi 160 (311)
++++++.+ -++++++|.+|=. +.|+-.-++- -+.++.+++. +.+|++..-..++-.+ ...++
T Consensus 120 ~ivdal~~-~v~~vKvg~~lfe--a~G~~gi~~L-------------~~~v~~lr~~-g~~VflDlK~~DIgnT-va~ya 181 (353)
T 2ffc_A 120 YIINETKE-YALAYKMNFAFYL--PYGSLGVDVL-------------KNVFDYLHHL-NVPTILDIKMNDIGNT-VKHYR 181 (353)
T ss_dssp HHHHHHGG-GCSEEEEEGGGGS--TTTHHHHHHH-------------HHHHHHHHHH-TCCEEEEEEECCCHHH-HHHHH
T ss_pred HHHHHhcc-ccceeeccHHHHH--hcCHHHHHHH-------------HHHHHHHHHc-CCcEEEEEecCchHHH-HHHHH
Confidence 34455433 3799999999932 3475543221 2346666654 7899998765555333 34566
Q ss_pred HHHH-HcCCcEEEecCC
Q 021527 161 STVR-DIGIRGLVVPDV 176 (311)
Q Consensus 161 ~~~~-~aGadGviipDl 176 (311)
+.+. ..|+|.+.+.-.
T Consensus 182 ~a~~~~lgaD~vTVhp~ 198 (353)
T 2ffc_A 182 KFIFDYLRSDSCTANIY 198 (353)
T ss_dssp HHHHTTSCCSEEEECCT
T ss_pred HHHHHHcCCCEEEEeCC
Confidence 6664 689999999744
No 368
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=95.33 E-value=0.37 Score=45.79 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=91.0
Q ss_pred cEEEEEeCCC----CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-
Q 021527 64 ALIPYITAGD----PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM- 138 (311)
Q Consensus 64 ~li~yi~~G~----P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~- 138 (311)
.+-.|-+.|+ .+.+.+.+.++.+.+.|.+.+++-+- ++ +++.-.+.++.+|+.+
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g------~~---------------~~~~~~e~v~avr~a~g 208 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIG------GA---------------PIEEDRMRIEAVLEEIG 208 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECS------SS---------------CHHHHHHHHHHHHHHHT
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCC------CC---------------CHHHHHHHHHHHHHhcC
Confidence 4445766665 36788889999999999999998421 11 2233456777777653
Q ss_pred -CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 139 -SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 139 -~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
++++.+-. |. -+..+++.++.+.++++|+..+- .|
T Consensus 209 ~~~~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~i~~iE--qP---------------- 244 (392)
T 1tzz_A 209 KDAQLAVDA--NG------------------------RFNLETGIAYAKMLRDYPLFWYE--EV---------------- 244 (392)
T ss_dssp TTCEEEEEC--TT------------------------CCCHHHHHHHHHHHTTSCCSEEE--CC----------------
T ss_pred CCCeEEEEC--CC------------------------CCCHHHHHHHHHHHHHcCCCeec--CC----------------
Confidence 56766632 21 02335666677777777766431 11
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-----CcEEEEh
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-----ADGVIVG 279 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-----ADGvIVG 279 (311)
++++..+.++++++.+++||+.+-.+.++++++++++.| +|.+.+-
T Consensus 245 ----------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 245 ----------------GDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp ----------------SCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred ----------------CChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 122224568889888899999999999999999999876 8998774
No 369
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.27 E-value=0.3 Score=43.35 Aligned_cols=106 Identities=11% Similarity=0.116 Sum_probs=67.0
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeE-----------EEeCCCChHHHHHHHHHhCCceEEEEecC
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV-----------LFTTPTTPTDRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I-----------~lisp~t~~eri~~i~~~a~gfiY~vs~~ 225 (311)
.++.+.+.+.|+.|+.+.. +++..+.+ +..++..+ ++++|+ .+.+.+..+..-.+|.+.+
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~--~~~i~~ir---~~v~~Pvig~~k~~~~~~~~~I~~~--~~~i~~~~~aGad~I~l~~-- 109 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEG--IENLRTVR---PHLSVPIIGIIKRDLTGSPVRITPY--LQDVDALAQAGADIIAFDA-- 109 (229)
T ss_dssp HHHHHHHHHTTCSEEEEES--HHHHHHHG---GGCCSCEEEECBCCCSSCCCCBSCS--HHHHHHHHHHTCSEEEEEC--
T ss_pred HHHHHHHHHCCCcEEEECC--HHHHHHHH---HhcCCCEEEEEeecCCCCceEeCcc--HHHHHHHHHcCCCEEEECc--
Confidence 4567778999999998863 33333332 33355543 245553 3456566555555554432
Q ss_pred CccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 226 GVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+.. .-+..+.++++++++. +++++ -.+++.++++++.+.|||.+.+
T Consensus 110 --~~~--~~p~~l~~~i~~~~~~-g~~v~--~~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 110 --SFR--SRPVDIDSLLTRIRLH-GLLAM--ADCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp --CSS--CCSSCHHHHHHHHHHT-TCEEE--EECSSHHHHHHHHHTTCSEEEC
T ss_pred --ccc--CChHHHHHHHHHHHHC-CCEEE--EecCCHHHHHHHHhCCCCEEEe
Confidence 111 1134567889988875 55554 4789999999999999999865
No 370
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.27 E-value=0.14 Score=47.40 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=13.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEeCC
Q 021527 178 LEETESLQKEAMKNKIELVLFTTP 201 (311)
Q Consensus 178 ~ee~~~~~~~~~~~gi~~I~lisp 201 (311)
.+|..++.+.+++.|.+.+.+++|
T Consensus 95 t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 95 TQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCC
Confidence 345555555555566665555554
No 371
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.18 E-value=0.68 Score=43.09 Aligned_cols=165 Identities=13% Similarity=0.140 Sum_probs=91.3
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc--C-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG--V-PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM 138 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG--~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~ 138 (311)
...++.=+.-||-+.+...+.++.+.++|++.|.|- . |-.-.-.+|..+ +..++..+-|+.+++.
T Consensus 89 ~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l-----------~~~~e~~~rI~Aa~~A- 156 (305)
T 3ih1_A 89 DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKL-----------VTTEELVQKIKAIKEV- 156 (305)
T ss_dssp CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCB-----------CCHHHHHHHHHHHHHH-
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcc-----------cCHHHHHHHHHHHHHc-
Confidence 345666666677777788899999999999999993 1 110000011000 2333434445555444
Q ss_pred CCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe-----CCCChHHHHHH
Q 021527 139 SCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT-----TPTTPTDRMKA 210 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li-----sp~t~~eri~~ 210 (311)
..++.+.+--+.....|.++-+++ +.++|+|++.++-+|- .++++..+++..+..+..+ +|..+.+.
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~--~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~e--- 231 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEALQS--EEEFRLFNSKVNAPLLANMTEFGKTPYYSAEE--- 231 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTCCS--HHHHHHHHHHSCSCBEEECCTTSSSCCCCHHH---
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCCCC--HHHHHHHHHHcCCCEEEeecCCCCCCCCCHHH---
Confidence 567777654443444577777765 5779999999988773 2334455566666654332 23334343
Q ss_pred HHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhc
Q 021527 211 IVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKES 248 (311)
Q Consensus 211 i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~ 248 (311)
+.+..-.++.+ |.+..+.. ...+.+.++.+++.
T Consensus 232 L~~lGv~~v~~----~~~~~raa-~~a~~~~~~~i~~~ 264 (305)
T 3ih1_A 232 FANMGFQMVIY----PVTSLRVA-AKAYENVFTLIKET 264 (305)
T ss_dssp HHHTTCSEEEE----CSHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEE----chHHHHHH-HHHHHHHHHHHHhc
Confidence 44444444433 22222211 12345566666653
No 372
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.16 E-value=0.44 Score=44.12 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=75.0
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec-CCC-hhhHHHHHHHHHHc-C--CCeEEEeCC----CChHHHH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP-DVP-LEETESLQKEAMKN-K--IELVLFTTP----TTPTDRM 208 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip-Dlp-~ee~~~~~~~~~~~-g--i~~I~lisp----~t~~eri 208 (311)
++.||+.-.-.. ....+++..+.++|.-|++.. .+. .++..+..+.+++. + +..-+++.| ...++.+
T Consensus 14 ~~~Pii~apM~g----vs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~ 89 (328)
T 2gjl_A 14 VEHPIMQGGMQW----VGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYR 89 (328)
T ss_dssp CSSSEEECCCTT----TCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHH
T ss_pred CCCCEEECCCCC----CCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHH
Confidence 578987743321 123568889999999998853 444 56655555555542 2 222334542 2334566
Q ss_pred HHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 209 KAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 209 ~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+.+.+..-.+ +....| .+ .++++++++. ++|++ ..+++++++..+.+.|+|++++
T Consensus 90 ~~~~~~g~d~--V~~~~g-------~p---~~~~~~l~~~-gi~vi--~~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 90 AAIIEAGIRV--VETAGN-------DP---GEHIAEFRRH-GVKVI--HKCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHTTCCE--EEEEES-------CC---HHHHHHHHHT-TCEEE--EEESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHhcCCCE--EEEcCC-------Cc---HHHHHHHHHc-CCCEE--eeCCCHHHHHHHHHcCCCEEEE
Confidence 6555533333 322111 22 3567778775 67776 4578999999999999999999
No 373
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=95.15 E-value=0.28 Score=47.33 Aligned_cols=144 Identities=9% Similarity=0.030 Sum_probs=96.0
Q ss_pred ccEEEEEeC-CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--C
Q 021527 63 VALIPYITA-GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--S 139 (311)
Q Consensus 63 ~~li~yi~~-G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~ 139 (311)
..+=.|.+. +..+.+.+.+.++.+.+.|.+.+.+-+... |. ||. ..++.-++.++.+|+.+ +
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~g-p~-dg~-------------~~~~~die~v~avReavG~d 230 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYG-PK-DGM-------------PGMRENLKRVEAVREVIGYD 230 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCC-GG-GHH-------------HHHHHHHHHHHHHHHHHCSS
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccC-cc-ccc-------------chHHHHHHHHHHHHHHcCCC
Confidence 345456653 345678999999999999999999964432 21 332 12344567888888763 5
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+|+.+-. |. -+..+++.++.+.+.++|+..+- .
T Consensus 231 ~~L~vDa--N~------------------------~~~~~~Ai~~~~~Le~~~i~~iE--e------------------- 263 (412)
T 3stp_A 231 NDLMLEC--YM------------------------GWNLDYAKRMLPKLAPYEPRWLE--E------------------- 263 (412)
T ss_dssp SEEEEEC--TT------------------------CSCHHHHHHHHHHHGGGCCSEEE--C-------------------
T ss_pred CeEEEEC--CC------------------------CCCHHHHHHHHHHHHhcCCCEEE--C-------------------
Confidence 6776643 21 11245666677777777766541 1
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhH
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSA 281 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSa 281 (311)
.++++..+.++++|+.+++||+.|-.+.++++++++++.| +|.+.+--.
T Consensus 264 -------------P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~ 313 (412)
T 3stp_A 264 -------------PVIADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTN 313 (412)
T ss_dssp -------------CSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred -------------CCCcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChh
Confidence 1122223568889998999999999999999999999766 688866433
No 374
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.15 E-value=1.2 Score=38.41 Aligned_cols=111 Identities=13% Similarity=0.158 Sum_probs=66.7
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEE-----------EeCCCChHHHHHHHHHhCCceEEEEecC
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL-----------FTTPTTPTDRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~-----------lisp~t~~eri~~i~~~a~gfiY~vs~~ 225 (311)
.+.++.+.++|++++.+. .++....+ .+..++..+- ++.+ +.++++...+..-.++.+.+.
T Consensus 26 ~~~a~~~~~~Ga~~i~~~--~~~~i~~i---~~~~~~pv~~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~v~l~~~- 97 (223)
T 1y0e_A 26 SKMALAAYEGGAVGIRAN--TKEDILAI---KETVDLPVIGIVKRDYDHSDVFITA--TSKEVDELIESQCEVIALDAT- 97 (223)
T ss_dssp HHHHHHHHHHTCSEEEEE--SHHHHHHH---HHHCCSCEEEECBCCCTTCCCCBSC--SHHHHHHHHHHTCSEEEEECS-
T ss_pred HHHHHHHHHCCCeeeccC--CHHHHHHH---HHhcCCCEEeeeccCCCccccccCC--cHHHHHHHHhCCCCEEEEeee-
Confidence 456777888999998763 22333323 2334555431 1222 346666665554455544321
Q ss_pred CccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 226 GVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.....+..+.++++++|+.. +.++ +-++++++++.++.+.|+|.+.++..
T Consensus 98 ----~~~~p~~~~~~~i~~~~~~~~~~~v--~~~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 98 ----LQQRPKETLDELVSYIRTHAPNVEI--MADIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp ----CSCCSSSCHHHHHHHHHHHCTTSEE--EEECSSHHHHHHHHHTTCSEEECTTT
T ss_pred ----cccCcccCHHHHHHHHHHhCCCceE--EecCCCHHHHHHHHHcCCCEEEeCCC
Confidence 11111124568899998875 4555 45788999999999999999877643
No 375
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=95.12 E-value=0.43 Score=45.52 Aligned_cols=133 Identities=12% Similarity=0.041 Sum_probs=92.2
Q ss_pred EEEEEeC-C-CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 65 LIPYITA-G-DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 65 li~yi~~-G-~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
+=.|.+. | ..+.+...+.++.+.+.|.+.+-+-+-. +.++-++.++.+|+.+ ++
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------------~~~~d~~~v~avR~a~g~d~ 196 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------------APRKDAANLRAMRQRVGADV 196 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------------CHHHHHHHHHHHHHHHCTTS
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------------CHHHHHHHHHHHHHHcCCCc
Confidence 5557665 6 5667899999999999999999985211 2344466788888763 56
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
|+.+-. |. -+..+++.++.+.++++|+..+- .|
T Consensus 197 ~l~vDa--n~------------------------~~~~~~A~~~~~~l~~~~i~~iE--qP------------------- 229 (389)
T 3ozy_A 197 EILVDA--NQ------------------------SLGRHDALAMLRILDEAGCYWFE--EP------------------- 229 (389)
T ss_dssp EEEEEC--TT------------------------CCCHHHHHHHHHHHHHTTCSEEE--SC-------------------
T ss_pred eEEEEC--CC------------------------CcCHHHHHHHHHHHHhcCCCEEE--CC-------------------
Confidence 776642 31 11245666777777777776551 11
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHh-hcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIK-ESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk-~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.+++++ +.+++||+.|-.+.++++++++++.| +|.+.+-
T Consensus 230 -------------~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 230 -------------LSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp -------------SCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred -------------CCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 1112235688888 88899999999999999999998765 7888764
No 376
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.12 E-value=0.52 Score=44.06 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=36.0
Q ss_pred HHHHHHHHhhcCCCcEEE---eeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 238 VQTLLREIKESSTKPVAV---GFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~v---GfGIst~e~v~~v~~~GADGvIVG 279 (311)
..+.++++|+.+++||++ |+|++ +++++.+.++|+|+++|.
T Consensus 166 ~~~~i~~vr~~~~~Pv~vK~~~~~~~-~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 166 ALKRIEQICSRVSVPVIVKEVGFGMS-KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHHCSSCEEEEEESSCCC-HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCC-HHHHHHHHHcCCCEEEEc
Confidence 567899999888999988 77775 899999999999999994
No 377
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=95.12 E-value=0.33 Score=45.87 Aligned_cols=134 Identities=4% Similarity=-0.008 Sum_probs=86.9
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
.+-.|.+.|..+.+.+.+.++.+.+.|.+.+++-+- .+ +++...+.++.+|+.+ ++|
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g------~~---------------~~~~~~e~v~avr~a~g~~~~ 192 (378)
T 2qdd_A 134 PVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIG------GS---------------DPAQDIARIEAISAGLPDGHR 192 (378)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECC------SS---------------CHHHHHHHHHHHHHSCCTTCE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCC------CC---------------ChHHHHHHHHHHHHHhCCCCE
Confidence 444576666667788899999999999999998421 11 2334467888888765 566
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-. |.- +..+++.++.+.+. +|+ .+
T Consensus 193 l~vDa--n~~------------------------~~~~~a~~~~~~l~-~~i-~i------------------------- 219 (378)
T 2qdd_A 193 VTFDV--NRA------------------------WTPAIAVEVLNSVR-ARD-WI------------------------- 219 (378)
T ss_dssp EEEEC--TTC------------------------CCHHHHHHHHTSCC-CCC-EE-------------------------
T ss_pred EEEeC--CCC------------------------CCHHHHHHHHHHhC-CCc-EE-------------------------
Confidence 65532 210 12244444444443 343 21
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAM 282 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSai 282 (311)
. ..++ + .+.++++++.+++||+.+--+.++++++++++.| +|++.+.-.-
T Consensus 220 E---------qP~~-d-~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 220 E---------QPCQ-T-LDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp E---------CCSS-S-HHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred E---------cCCC-C-HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 1 0112 2 3568888888899999999999999999998655 7999885443
No 378
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=95.09 E-value=0.41 Score=44.95 Aligned_cols=136 Identities=14% Similarity=0.115 Sum_probs=87.2
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcE
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPI 142 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPi 142 (311)
+-.|.+.|..+.+.+.+.++.+.+.|.+.+.+-+- .+ +.+.-.+.++.+|+.+ ++++
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g------~~---------------~~~~d~~~v~avr~a~g~~~~l 188 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVG------KD---------------DIATDIARIQEIRKRVGSAVKL 188 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECC------SS---------------CHHHHHHHHHHHHHHHCSSSEE
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeC------CC---------------CHHHHHHHHHHHHHHhCCCCeE
Confidence 43455555556678888888888999999998421 10 2334456777777653 5666
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHH--cCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK--NKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~--~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
.+-. |.- +..+++.++.+.+.+ +|+..+- .
T Consensus 189 ~vDa--n~~------------------------~~~~~a~~~~~~l~~~~~~i~~iE--q-------------------- 220 (366)
T 1tkk_A 189 RLDA--NQG------------------------WRPKEAVTAIRKMEDAGLGIELVE--Q-------------------- 220 (366)
T ss_dssp EEEC--TTC------------------------SCHHHHHHHHHHHHHTTCCEEEEE--C--------------------
T ss_pred EEEC--CCC------------------------CCHHHHHHHHHHHhhcCCCceEEE--C--------------------
Confidence 5542 311 123556666666666 5544320 1
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhH
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSA 281 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSa 281 (311)
.++++..+.++++++.+++||+.|-.+.++++++++++.| +|++.+--.
T Consensus 221 ------------P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 221 ------------PVHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp ------------CSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred ------------CCCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 1122223567888888899999999999999999988655 799988433
No 379
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.07 E-value=0.21 Score=45.88 Aligned_cols=113 Identities=14% Similarity=0.198 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHcCCcEEEec-------CCChhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHh-CCceEEEEe
Q 021527 155 GVDNFMSTVRDIGIRGLVVP-------DVPLEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEA-SEGFVYLVS 223 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviip-------Dlp~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~-a~gfiY~vs 223 (311)
+.++.++.+.+.|+||+++. -|..||..++.+.+.+. .+.++.-+..+++.+-++..... ..|...++.
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLI 101 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEE
Confidence 34667777778888887763 46667766655554432 35555555554544433221111 123332221
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-------eeCCCCHHHHHHHHH
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAV-------GFGISKPEHVQQVAG 270 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-------GfGIst~e~v~~v~~ 270 (311)
.....- + ....++.++.++|.+.+++||++ |..+ ++|.+.++.+
T Consensus 102 ~~P~y~-~-~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l-~~~~~~~La~ 152 (292)
T 2vc6_A 102 VSPYYN-K-PTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEI-HVETLARIFE 152 (292)
T ss_dssp ECCCSS-C-CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC-CHHHHHHHHH
T ss_pred cCCCCC-C-CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCC-CHHHHHHHHh
Confidence 111111 1 12345666677777777788766 4445 4777777765
No 380
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=95.06 E-value=0.45 Score=44.75 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=88.4
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHH-CCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDS-CGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~-~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
.+-.|.+.|.-+.+...+.++.+.+ .|.+.+++-+-. + +++.-++.++.+|+.+ ++
T Consensus 131 ~v~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~------~---------------~~~~~~e~v~avr~a~g~~~ 189 (370)
T 1nu5_A 131 SIPIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGA------R---------------TPAQDLEHIRSIVKAVGDRA 189 (370)
T ss_dssp EEEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSS------S---------------CHHHHHHHHHHHHHHHGGGC
T ss_pred ceEeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCC------C---------------ChHHHHHHHHHHHHhcCCCC
Confidence 3444544443345778888888888 999999984211 1 1233356777777653 46
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+-. |. | ...+++.++.+.+.++|+..+- .|
T Consensus 190 ~l~vDa--n~----------------~--------~~~~~a~~~~~~l~~~~i~~iE--qP------------------- 222 (370)
T 1nu5_A 190 SVRVDV--NQ----------------G--------WDEQTASIWIPRLEEAGVELVE--QP------------------- 222 (370)
T ss_dssp EEEEEC--TT----------------C--------CCHHHHHHHHHHHHHHTCCEEE--CC-------------------
T ss_pred EEEEEC--CC----------------C--------CCHHHHHHHHHHHHhcCcceEe--CC-------------------
Confidence 655532 31 0 1346666777777777776431 11
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+--
T Consensus 223 -------------~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 223 -------------VPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp -------------SCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred -------------CCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 122223567888888899999999999999999998776 79988843
No 381
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.05 E-value=0.31 Score=44.67 Aligned_cols=112 Identities=14% Similarity=0.198 Sum_probs=61.7
Q ss_pred HHHHHHHHHHcCCcEEEec-------CCChhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHhC--CceEEEEe
Q 021527 156 VDNFMSTVRDIGIRGLVVP-------DVPLEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEAS--EGFVYLVS 223 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviip-------Dlp~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~a--~gfiY~vs 223 (311)
.++.++.+.+.|+||+++. -|..||..++.+.+.+. .+.+|.-+..+++.+-++. ++.+ .|...++.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv 102 (292)
T 2ojp_A 24 LKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISL-TQRFNDSGIVGCLT 102 (292)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHH-HHHTTTSSCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHH-HHHHHhcCCCEEEE
Confidence 4567777777888887763 46667766655554432 2455555555555444433 2322 24433322
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-------eeCCCCHHHHHHHHHc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAV-------GFGISKPEHVQQVAGW 271 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-------GfGIst~e~v~~v~~~ 271 (311)
.....- + ....++.++.++|.+.+++||++ |..+ ++|.+.++.+.
T Consensus 103 ~~P~y~-~-~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l-~~~~~~~La~~ 154 (292)
T 2ojp_A 103 VTPYYN-R-PSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDL-LPETVGRLAKV 154 (292)
T ss_dssp ECCCSS-C-CCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCC-CHHHHHHHHTS
T ss_pred CCCCCC-C-CCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCC-CHHHHHHHHcC
Confidence 112111 1 12345667777777777788766 3344 47878777654
No 382
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=95.02 E-value=0.25 Score=41.43 Aligned_cols=43 Identities=19% Similarity=0.406 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhc-C-CCcEEEeeCCCCHHHHHHHHHcCCcEEEE-hh
Q 021527 237 HVQTLLREIKES-S-TKPVAVGFGISKPEHVQQVAGWGADGVIV-GS 280 (311)
Q Consensus 237 ~~~~~l~~vk~~-~-~~Pv~vGfGIst~e~v~~v~~~GADGvIV-GS 280 (311)
.+.++++.+|+. . +++|++|+-+- .++...+.+.|+|+++. |+
T Consensus 85 ~~~~~i~~L~~~g~~~i~v~vGG~~~-~~~~~~l~~~G~d~v~~~~~ 130 (161)
T 2yxb_A 85 LMKRLMAKLRELGADDIPVVLGGTIP-IPDLEPLRSLGIREIFLPGT 130 (161)
T ss_dssp HHHHHHHHHHHTTCTTSCEEEEECCC-HHHHHHHHHTTCCEEECTTC
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCc-hhcHHHHHHCCCcEEECCCC
Confidence 345677778775 2 68999998775 56777788899998764 44
No 383
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=95.01 E-value=1.8 Score=41.92 Aligned_cols=193 Identities=10% Similarity=0.038 Sum_probs=116.4
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc---EEEEecCc
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP---IALFTYYN 149 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP---iilm~Y~n 149 (311)
-.+++.+.-++++.++.+..+|----+-.-. .+|.. .|.+.+.+..+++.+.++.++| |+|-.
T Consensus 21 ~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~-~~gGY----------~g~~~~~~~~~v~~~A~~~~vP~~~VaLHl--- 86 (420)
T 2fiq_A 21 SAHPLVIEAALAFDRNSTRKVLIEATSNQVN-QFGGY----------TGMTPADFREFVFAIADKVGFARERIILGG--- 86 (420)
T ss_dssp CCCHHHHHHHHHHTTTSCCCEEEEEETTTBS-TTCTT----------TTBCHHHHHHHHHHHHHHHTCCGGGEEEEE---
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEcChhhhh-hccCC----------CCCCHHHHHHHHHHHHHHcCcCcceEEEEC---
Confidence 4566888888888888888775443221100 01111 1344677788888888888899 77753
Q ss_pred chhccCHH---------------HHHHHHHHcCCcEEEec--C------CChhh------HHHHHHHHHHc----C---C
Q 021527 150 PILKRGVD---------------NFMSTVRDIGIRGLVVP--D------VPLEE------TESLQKEAMKN----K---I 193 (311)
Q Consensus 150 ~i~~~g~~---------------~fi~~~~~aGadGviip--D------lp~ee------~~~~~~~~~~~----g---i 193 (311)
-+.+.. +.+..+.++|.+.|.+= - +|+++ ..++.+.+.++ + +
T Consensus 87 --DHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~~~~~~eaEl 164 (420)
T 2fiq_A 87 --DHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQL 164 (420)
T ss_dssp --EEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHC
T ss_pred --CCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcccCCcccc
Confidence 122222 67888999999999882 2 55654 24566777765 0 1
Q ss_pred CeEEE---------------eCCCChHHHHHHHHH------hCCc-------eEEEE----ecCCccCCCCCCCchHHHH
Q 021527 194 ELVLF---------------TTPTTPTDRMKAIVE------ASEG-------FVYLV----SSIGVTGARASISGHVQTL 241 (311)
Q Consensus 194 ~~I~l---------------isp~t~~eri~~i~~------~a~g-------fiY~v----s~~G~TG~~~~~~~~~~~~ 241 (311)
..+.. ...|+| +..++..+ ...| .+.++ +..|.++ ...++. +.
T Consensus 165 G~vgG~Ev~v~~~~~~~~~~~~~T~P-eeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~-~~~ld~---e~ 239 (420)
T 2fiq_A 165 SYVIGTEVPVPGGEASAIQSVHITHV-EDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSN-IIHYQP---QE 239 (420)
T ss_dssp EEEEECSSCC----------CCCCCH-HHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSC-EECCCG---GG
T ss_pred eEEeeeecCCCCCcccccCCCCCCCH-HHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCC-CCCcCH---HH
Confidence 11111 113444 44444444 0222 33353 2333332 223333 46
Q ss_pred HHHHhhcCCCc-EEE----eeCCCCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 242 LREIKESSTKP-VAV----GFGISKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 242 l~~vk~~~~~P-v~v----GfGIst~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
+++|++.+++| ++. |.|+. .++++++.+.|.--+=|||.+.....
T Consensus 240 l~~I~~~v~~P~LVle~HGgSg~~-~e~l~~~v~~Gi~kiNV~t~l~~a~~ 289 (420)
T 2fiq_A 240 AQALAQWIENTRMVYEAHSTDYQT-RTAYWELVRDHFAILKVGPALTFALR 289 (420)
T ss_dssp GHHHHHHHTTSSCEEEESCCTTCC-HHHHHHHHHTTEEEEEECHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEecCCCCCCC-HHHHHHHHHcCCCEEEECHHHHHHHH
Confidence 78888888889 776 56665 79999999999888889999977643
No 384
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.99 E-value=0.52 Score=43.84 Aligned_cols=121 Identities=21% Similarity=0.247 Sum_probs=75.1
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec-CCChhhHHHHHHHHHHcC-CCe-EEE-e-CCCChHHHHHHHH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP-DVPLEETESLQKEAMKNK-IEL-VLF-T-TPTTPTDRMKAIV 212 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip-Dlp~ee~~~~~~~~~~~g-i~~-I~l-i-sp~t~~eri~~i~ 212 (311)
++.||+.-.... ....+++..+.++|.-|++.. .++.++..+..+.+++.- ... +-+ + .|. .++.++.+.
T Consensus 25 ~~~Pii~apM~g----vs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~-~~~~~~~~~ 99 (326)
T 3bo9_A 25 IEHPILMGGMAW----AGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPW-ADDLVKVCI 99 (326)
T ss_dssp CSSSEEECCCTT----TSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTT-HHHHHHHHH
T ss_pred CCCCEEECCCCC----CCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCC-HHHHHHHHH
Confidence 578988744321 123578899999999999865 456677666666666532 111 222 2 232 345555554
Q ss_pred HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 213 EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 213 ~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+..-.+| ....| .+ .++++++++. ++|+++ +++++++++.+.+.|+|++++
T Consensus 100 ~~g~d~V--~l~~g-------~p---~~~~~~l~~~-g~~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 100 EEKVPVV--TFGAG-------NP---TKYIRELKEN-GTKVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp HTTCSEE--EEESS-------CC---HHHHHHHHHT-TCEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HCCCCEE--EECCC-------Cc---HHHHHHHHHc-CCcEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 5333333 22111 23 3567777764 667665 678999999999999999999
No 385
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=94.95 E-value=0.026 Score=54.04 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=36.8
Q ss_pred HHHHHHHHhhcCCCcEEE---eeCCCCHHHHHHHHHcCCcEEEE
Q 021527 238 VQTLLREIKESSTKPVAV---GFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~v---GfGIst~e~v~~v~~~GADGvIV 278 (311)
..+.|+++++.+++||++ |+|+ ++++++.+.++|+|+++|
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~-s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGI-SMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCC-CHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC-CHHHHHHHHhCCCCEEEE
Confidence 567899999999999999 8888 499999999999999999
No 386
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.93 E-value=1.4 Score=39.78 Aligned_cols=172 Identities=15% Similarity=0.194 Sum_probs=92.5
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCc--
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYN-- 149 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n-- 149 (311)
.++.+...+.++.+.+.|+|++|+=+=|-+...| .+.+.+.+..+|+.. ++|+++ ++-.
T Consensus 28 ~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~-----------------~~~v~~~l~~lr~~~~~~PiI~-T~Rt~~ 89 (257)
T 2yr1_A 28 GEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDD-----------------QERVLATANGLRNIAGEIPILF-TIRSER 89 (257)
T ss_dssp CSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTC-----------------HHHHHHHHHHHHHHSSSCCEEE-ECCCTT
T ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEeecccccCc-----------------HHHHHHHHHHHHHhccCCCEEE-EEeecc
Confidence 4888998899999889999999996444222212 234456777777766 789866 3321
Q ss_pred --chh-ccCHH---HHHHHHHHcC-CcEEEecCCChh-hHHHHHHHHHHcCCCeEEEe-----CCCChHHHHHHHHHh-C
Q 021527 150 --PIL-KRGVD---NFMSTVRDIG-IRGLVVPDVPLE-ETESLQKEAMKNKIELVLFT-----TPTTPTDRMKAIVEA-S 215 (311)
Q Consensus 150 --~i~-~~g~~---~fi~~~~~aG-adGviipDlp~e-e~~~~~~~~~~~gi~~I~li-----sp~t~~eri~~i~~~-a 215 (311)
..+ ....+ +.++.+.+.| +|-+ -.++-.. ...++.+.+++.|.++|.-. +|. .++....+.+. .
T Consensus 90 eGG~~~~~~~~~~~~ll~~~~~~g~~d~i-DvEl~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~ 167 (257)
T 2yr1_A 90 EGGQPIPLNEAEVRRLIEAICRSGAIDLV-DYELAYGERIADVRRMTEECSVWLVVSRHYFDGTPR-KETLLADMRQAER 167 (257)
T ss_dssp TTCCCCSSCHHHHHHHHHHHHHHTCCSEE-EEEGGGTTHHHHHHHHHHHTTCEEEEEEEESSCCCC-HHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCEE-EEECCCChhHHHHHHHHHhCCCEEEEEecCCCCCcC-HHHHHHHHHHHHh
Confidence 112 22223 3555667777 7754 3333222 34456667778887766432 232 13333222222 2
Q ss_pred Cc-eEEEEecCCccCCCCCCCchHHHHH---HHHhhcCCCcEEEeeCCCCHHHHHHHHHc
Q 021527 216 EG-FVYLVSSIGVTGARASISGHVQTLL---REIKESSTKPVAVGFGISKPEHVQQVAGW 271 (311)
Q Consensus 216 ~g-fiY~vs~~G~TG~~~~~~~~~~~~l---~~vk~~~~~Pv~vGfGIst~e~v~~v~~~ 271 (311)
.| .++-+..+.. ...++..++ .++++..+.|+ ++++-...-.+.+++..
T Consensus 168 ~gaDivKia~~a~------s~~D~l~ll~~~~~~~~~~~~P~-I~~~MG~~G~~SRi~~~ 220 (257)
T 2yr1_A 168 YGADIAKVAVMPK------SPEDVLVLLQATEEARRELAIPL-ITMAMGGLGAITRLAGW 220 (257)
T ss_dssp TTCSEEEEEECCS------SHHHHHHHHHHHHHHHHHCSSCE-EEEECTTTTHHHHHHGG
T ss_pred cCCCEEEEEeccC------CHHHHHHHHHHHHHHhccCCCCE-EEEECCCCcchHHHHHH
Confidence 34 3333443321 123344444 34434457896 34433333567777754
No 387
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=94.92 E-value=0.28 Score=45.50 Aligned_cols=26 Identities=12% Similarity=0.075 Sum_probs=14.7
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEeCCC
Q 021527 177 PLEETESLQKEAMKNKIELVLFTTPT 202 (311)
Q Consensus 177 p~ee~~~~~~~~~~~gi~~I~lisp~ 202 (311)
..+|..++.+.+++.|.+.+.+++|.
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 34555555556666666666555553
No 388
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=94.91 E-value=2.1 Score=40.13 Aligned_cols=178 Identities=15% Similarity=0.183 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHCCCCEEEE-cCC-C--CCCCC------ChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 77 STTAEALKLLDSCGSDIIEL-GVP-Y--SDPLA------DGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IEl-G~P-f--sDP~a------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
+...+.++.+.+.|+..|-| |+| - .|+.. ||++.+ .++.||+++.- +++++
T Consensus 66 d~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~g~v~r------------------air~iK~~~pd-l~vit 126 (337)
T 1w5q_A 66 DQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQR------------------ATRALRERFPE-LGIIT 126 (337)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHH------------------HHHHHHHHCTT-SEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCCChHHH------------------HHHHHHHHCCC-eEEEE
Confidence 57999999999999998876 773 3 33333 454433 45556655311 44442
Q ss_pred ------cCc----chhc-cC-H------HHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC-----
Q 021527 147 ------YYN----PILK-RG-V------DNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT----- 200 (311)
Q Consensus 147 ------Y~n----~i~~-~g-~------~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis----- 200 (311)
|.. .+.. .| + +...+. .+++|+|-|--.|+=.......++.+.++|...+...+
T Consensus 127 DvcLc~YT~HGHcGil~~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKy 206 (337)
T 1w5q_A 127 DVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKY 206 (337)
T ss_dssp EECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEB
T ss_pred eeecccCCCCCcceeeCCCCcCccHHHHHHHHHHHHHHHHcCCCeEecccccccHHHHHHHHHHHCCCCCceeehhHHHH
Confidence 211 1222 23 1 223332 36799999876788777788899999999997555322
Q ss_pred ---------------CCC--------------hHHHHHHHHH-hCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC
Q 021527 201 ---------------PTT--------------PTDRMKAIVE-ASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST 250 (311)
Q Consensus 201 ---------------p~t--------------~~eri~~i~~-~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~ 250 (311)
|.. ..|-+++... ..+|...++=.- .+ ...+.|+++|+.++
T Consensus 207 ASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKP-------al--~YLDIir~vk~~~~ 277 (337)
T 1w5q_A 207 ASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKP-------GM--PYLDIVRRVKDEFR 277 (337)
T ss_dssp CCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEES-------CG--GGHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcC-------CC--chHHHHHHHHHhcC
Confidence 322 2344444432 356665553111 11 24688999999999
Q ss_pred CcEEE---------------eeCCC---CHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 251 KPVAV---------------GFGIS---KPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 251 ~Pv~v---------------GfGIs---t~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
+|+++ .+=|. --|.+..++++|||++| |.+.+
T Consensus 278 ~PvaaYqVSGEYAMikaAa~~GwiD~~~v~Esl~~~kRAGAd~Ii--TYfA~ 327 (337)
T 1w5q_A 278 APTFVYQVSGEYAMHMGAIQNGWLAESVILESLTAFKRAGADGIL--TYFAK 327 (337)
T ss_dssp SCEEEEECHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHTCSEEE--ETTHH
T ss_pred CCEEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHhcCCCEEe--eecHH
Confidence 99965 11122 13556677789999886 44444
No 389
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.91 E-value=0.11 Score=47.78 Aligned_cols=115 Identities=9% Similarity=-0.048 Sum_probs=65.3
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCC-CCEEEEcCCC-----CCCCCChHHHHHHHHHHHHcCCC
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCG-SDIIELGVPY-----SDPLADGPVIQAAATRSLARGTN 123 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~G-aD~IElG~Pf-----sDP~aDGp~Iq~a~~~Al~~G~~ 123 (311)
+.+.++.+++.-...++.-+.++ .+.+.+.++++.+.++| +|.|.+-.-. -|+....|.+..+ ....|.+
T Consensus 148 ~~~ii~~vr~~~~~Pv~vK~~~~-~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~---~~~gG~s 223 (314)
T 2e6f_A 148 MRTYLQQVSLAYGLPFGVKMPPY-FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPK---QGFGGLG 223 (314)
T ss_dssp HHHHHHHHHHHHCSCEEEEECCC-CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGG---GGEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCC-CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccC---cCCCccC
Confidence 45566666554234566556554 36678889999999999 9999874311 1111111100000 0001111
Q ss_pred ----HHHHHHHHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 124 ----FNAILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 124 ----~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
....++.++++++.+ ++||+..+-.+ . .+.+.++..+|+|+|.+.
T Consensus 224 g~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~-----~-~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 224 GKYILPTALANVNAFYRRCPDKLVFGCGGVY-----S-GEDAFLHILAGASMVQVG 273 (314)
T ss_dssp SGGGHHHHHHHHHHHHHHCTTSEEEEESSCC-----S-HHHHHHHHHHTCSSEEEC
T ss_pred cccccHHHHHHHHHHHHhcCCCCEEEECCCC-----C-HHHHHHHHHcCCCEEEEc
Confidence 012256888888887 99999876322 1 234444557899999884
No 390
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=94.89 E-value=0.35 Score=45.90 Aligned_cols=135 Identities=12% Similarity=0.085 Sum_probs=85.6
Q ss_pred ccEEEEEeCCC--CCh---hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc
Q 021527 63 VALIPYITAGD--PDL---STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ 137 (311)
Q Consensus 63 ~~li~yi~~G~--P~~---~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~ 137 (311)
..+-.|-..|. .+. +.+.+.++.+.+.|.+.+++-+ .++ +++...+.++.+|+.
T Consensus 122 ~~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~------g~~---------------~~~~d~e~v~avR~a 180 (382)
T 2gdq_A 122 EEIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKI------GGT---------------SFKEDVRHINALQHT 180 (382)
T ss_dssp SEEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEEC------SSS---------------CHHHHHHHHHHHHHH
T ss_pred CceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcC------CCC---------------CHHHHHHHHHHHHHh
Confidence 34445644332 455 7888889999999999999842 111 233445677777765
Q ss_pred C--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHc-CCCeEEEeCCCChHHHHHHHHHh
Q 021527 138 M--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKN-KIELVLFTTPTTPTDRMKAIVEA 214 (311)
Q Consensus 138 ~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~-gi~~I~lisp~t~~eri~~i~~~ 214 (311)
+ ++++.+-. |. -+..+++.++.+.+.++ |+.
T Consensus 181 ~G~d~~l~vDa--n~------------------------~~~~~~a~~~~~~l~~~~~i~-------------------- 214 (382)
T 2gdq_A 181 AGSSITMILDA--NQ------------------------SYDAAAAFKWERYFSEWTNIG-------------------- 214 (382)
T ss_dssp HCTTSEEEEEC--TT------------------------CCCHHHHHTTHHHHTTCSCEE--------------------
T ss_pred hCCCCEEEEEC--CC------------------------CCCHHHHHHHHHHHhhccCCe--------------------
Confidence 3 56766632 21 01234555555555555 433
Q ss_pred CCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 215 SEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 215 a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
|+.. .++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+
T Consensus 215 -----~iEq---------P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 215 -----WLEE---------PLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp -----EEEC---------CSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred -----EEEC---------CCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 2210 1122224568889998999999999999999999999766 788866
No 391
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.89 E-value=0.074 Score=45.82 Aligned_cols=111 Identities=15% Similarity=0.238 Sum_probs=62.5
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
+.+..+.+++.|.+.++..+.+. +..+.++.+.+.|+|+|-+. |-.+|.. .+.+ .++
T Consensus 92 ~~~~~~~~~~~g~~~~v~~~~~~-----t~~~~~~~~~~~g~d~i~v~-----~g~~g~~----------~~~~---~~~ 148 (211)
T 3f4w_A 92 IQSCIRAAKEAGKQVVVDMICVD-----DLPARVRLLEEAGADMLAVH-----TGTDQQA----------AGRK---PID 148 (211)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCS-----SHHHHHHHHHHHTCCEEEEE-----CCHHHHH----------TTCC---SHH
T ss_pred HHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHHcCCCEEEEc-----CCCcccc----------cCCC---CHH
Confidence 45555555555654433223222 33577778888889987663 2222311 1111 135
Q ss_pred HHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecC------CChhhHHHHHHHHHH
Q 021527 130 MLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPD------VPLEETESLQKEAMK 190 (311)
Q Consensus 130 ~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipD------lp~ee~~~~~~~~~~ 190 (311)
.++++++.. ++|+++-+=.| .+-++.+.++|+|++++.- =|.+...++++.+++
T Consensus 149 ~i~~l~~~~~~~~i~~~gGI~-------~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 149 DLITMLKVRRKARIAVAGGIS-------SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp HHHHHHHHCSSCEEEEESSCC-------TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcEEEECCCC-------HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 677777664 78988865333 1346677889999999952 122334555555544
No 392
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=94.88 E-value=0.75 Score=44.17 Aligned_cols=142 Identities=15% Similarity=0.165 Sum_probs=94.7
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEE-cCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--C
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIEL-GVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--S 139 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IEl-G~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~ 139 (311)
..+-.|.+.|..+.+...+.++.+.+.|.+.+=+ |.|-.+...... ++++-++.++.+|+.+ +
T Consensus 113 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~--------------~~~~d~e~v~avR~avG~d 178 (405)
T 3rr1_A 113 DKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSR--------------AVDAAVARVAEIRSAFGNT 178 (405)
T ss_dssp SCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHH--------------HHHHHHHHHHHHHHTTGGG
T ss_pred CceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccch--------------hHHHHHHHHHHHHHHhCCC
Confidence 4566788888878899999999999999999887 322211111111 1233456788888765 5
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+++.+- .|. -+..+++.++.+.+.++|+..+- .|
T Consensus 179 ~~L~vD--aN~------------------------~~~~~~A~~~~~~L~~~~i~~iE--eP------------------ 212 (405)
T 3rr1_A 179 VEFGLD--FHG------------------------RVSAPMAKVLIKELEPYRPLFIE--EP------------------ 212 (405)
T ss_dssp SEEEEE--CCS------------------------CBCHHHHHHHHHHHGGGCCSCEE--CS------------------
T ss_pred ceEEEE--CCC------------------------CCCHHHHHHHHHHHHhcCCCEEE--CC------------------
Confidence 666653 231 11245666677777777765441 11
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+
T Consensus 213 --------------~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~ 258 (405)
T 3rr1_A 213 --------------VLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQP 258 (405)
T ss_dssp --------------SCCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECC
T ss_pred --------------CCcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEE
Confidence 111112568888898999999999999999999998765 688866
No 393
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=94.84 E-value=0.42 Score=43.68 Aligned_cols=122 Identities=19% Similarity=0.225 Sum_probs=75.7
Q ss_pred HHHHHHHcCCcEEEecCC----ChhhHHHH----HHHHHHcCCCeEEEeCCCChHHHH--------H-HHHHh-------
Q 021527 159 FMSTVRDIGIRGLVVPDV----PLEETESL----QKEAMKNKIELVLFTTPTTPTDRM--------K-AIVEA------- 214 (311)
Q Consensus 159 fi~~~~~aGadGviipDl----p~ee~~~~----~~~~~~~gi~~I~lisp~t~~eri--------~-~i~~~------- 214 (311)
-...+++.|++.+|+..- -+.|..++ ...+.++|+.+|+-+.- +-++|- . .+...
T Consensus 84 S~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCvGE-tleeReag~t~~vv~~Ql~~~l~~l~~~ 162 (267)
T 3ta6_A 84 SGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGE-HLDVREAGNHVAHNIEQLRGSLAGLLAE 162 (267)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHTTCHHHHHHHHHHHHTTTCCHH
T ss_pred cHHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-CHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 456789999999999731 01222222 55678899998877764 444541 1 11111
Q ss_pred --CCceEEEEe--cCCccCCCCCCCchHHHHHHHHhhc----------CCCcEEEeeCCCCHHHHHHHHH-cCCcEEEEh
Q 021527 215 --SEGFVYLVS--SIGVTGARASISGHVQTLLREIKES----------STKPVAVGFGISKPEHVQQVAG-WGADGVIVG 279 (311)
Q Consensus 215 --a~gfiY~vs--~~G~TG~~~~~~~~~~~~l~~vk~~----------~~~Pv~vGfGIst~e~v~~v~~-~GADGvIVG 279 (311)
..-.|-|.+ ..| ||.. ..++...+..+.||+. -+++|+.|+.++ ++|+++++. -..||+.||
T Consensus 163 ~~~~vvIAYEPVWAIG-TG~t-Atpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~-~~N~~el~~~~diDG~LVG 239 (267)
T 3ta6_A 163 QIGSVVIAYEPVWAIG-TGRV-ASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVN-AKNVGDIVAQDDVDGGLVG 239 (267)
T ss_dssp HHTTCEEEECCGGGSS-SSCC-CCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCC-TTTHHHHHTSTTCCEEEEC
T ss_pred HhCCEEEEECChhhhc-CCcC-CCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcC-HhHHHHHhcCCCCCEEEec
Confidence 122344433 333 6643 3345555655555553 148999999997 799998863 347999999
Q ss_pred hHhhc
Q 021527 280 SAMVK 284 (311)
Q Consensus 280 Saiv~ 284 (311)
.|=.+
T Consensus 240 gASL~ 244 (267)
T 3ta6_A 240 GASLD 244 (267)
T ss_dssp GGGGS
T ss_pred hHhcC
Confidence 98776
No 394
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=94.82 E-value=0.52 Score=45.00 Aligned_cols=147 Identities=16% Similarity=0.053 Sum_probs=0.0
Q ss_pred CccEEEEEe-CC--CC-------ChhhHHHHHHHHHHCCCCEEEE--------cCCCCCCCCChHHHHHHHHHHHHcCC-
Q 021527 62 KVALIPYIT-AG--DP-------DLSTTAEALKLLDSCGSDIIEL--------GVPYSDPLADGPVIQAAATRSLARGT- 122 (311)
Q Consensus 62 ~~~li~yi~-~G--~P-------~~~~~~e~~~~L~~~GaD~IEl--------G~PfsDP~aDGp~Iq~a~~~Al~~G~- 122 (311)
+..+-.|-+ .+ .. +.+.+.+.++.+.+.|.+.+++ |.+|..|+..-+ ..|.
T Consensus 127 ~~~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~----------~GG~~ 196 (410)
T 2gl5_A 127 NEKLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRN----------YSGLL 196 (410)
T ss_dssp CSSEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGG----------GGSCC
T ss_pred cCceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccccc----------ccCcc
Q ss_pred ---CHHHHHHHHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEE
Q 021527 123 ---NFNAILSMLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 123 ---~~~~~~~~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~ 197 (311)
+++...+.++.+|+.+ ++++.+ .++ .-+..+++.++.+.+.++|+..+-
T Consensus 197 ~~~~~~~~~e~v~avR~a~G~d~~l~v----------------------Dan----~~~~~~~ai~~~~~l~~~~i~~iE 250 (410)
T 2gl5_A 197 LADQLKMGEARIAAMREAMGDDADIIV----------------------EIH----SLLGTNSAIQFAKAIEKYRIFLYE 250 (410)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSSEEEE----------------------ECT----TCSCHHHHHHHHHHHGGGCEEEEE
T ss_pred chhHHHHHHHHHHHHHHhcCCCCEEEE----------------------ECC----CCCCHHHHHHHHHHHHhcCCCeEE
Q ss_pred EeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEE
Q 021527 198 FTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGV 276 (311)
Q Consensus 198 lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGv 276 (311)
..++++..+.++++|+.+++||+.+-.+.++++++++++.| +|.+
T Consensus 251 ----------------------------------~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 296 (410)
T 2gl5_A 251 ----------------------------------EPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVA 296 (410)
T ss_dssp ----------------------------------CSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEE
T ss_pred ----------------------------------CCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Q ss_pred EE
Q 021527 277 IV 278 (311)
Q Consensus 277 IV 278 (311)
.+
T Consensus 297 ~i 298 (410)
T 2gl5_A 297 QP 298 (410)
T ss_dssp CC
T ss_pred ec
No 395
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.78 E-value=0.23 Score=46.10 Aligned_cols=114 Identities=12% Similarity=0.198 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHcCCcEEEec-------CCChhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHhC-Cce-EEEE
Q 021527 155 GVDNFMSTVRDIGIRGLVVP-------DVPLEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEAS-EGF-VYLV 222 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviip-------Dlp~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~a-~gf-iY~v 222 (311)
+.++.++.+.+.|+||+++. -|..||..++.+.+.+. .+.++.-+..++..+-++...... .|. ..++
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davl 108 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGL 108 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEE
Confidence 44566666777777777663 35556666655555443 234444444444433332211111 121 2221
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-------eeCCCCHHHHHHHHHc
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAV-------GFGISKPEHVQQVAGW 271 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-------GfGIst~e~v~~v~~~ 271 (311)
....... + ....++.++.++|.+.+++||++ |..++ ++.+.++.+.
T Consensus 109 v~~P~y~-~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~-~~~~~~La~~ 161 (311)
T 3h5d_A 109 AIVPYYN-K-PSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELT-PETMLRLADH 161 (311)
T ss_dssp EECCCSS-C-CCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCC-HHHHHHHHTS
T ss_pred EcCCCCC-C-CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCC-HHHHHHHhcC
Confidence 1111111 1 11234556666666666777655 44453 6667666654
No 396
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.77 E-value=0.26 Score=45.99 Aligned_cols=17 Identities=24% Similarity=0.638 Sum_probs=8.1
Q ss_pred HHHHHHHHHcCCcEEEe
Q 021527 157 DNFMSTVRDIGIRGLVV 173 (311)
Q Consensus 157 ~~fi~~~~~aGadGvii 173 (311)
++.++.+.+.|+||+++
T Consensus 35 ~~lv~~li~~Gv~gl~v 51 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVI 51 (318)
T ss_dssp HHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 33444444555555444
No 397
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.73 E-value=0.24 Score=45.53 Aligned_cols=112 Identities=13% Similarity=0.218 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCcEEEe-------cCCChhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHhC--CceEEEEe
Q 021527 156 VDNFMSTVRDIGIRGLVV-------PDVPLEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEAS--EGFVYLVS 223 (311)
Q Consensus 156 ~~~fi~~~~~aGadGvii-------pDlp~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~a--~gfiY~vs 223 (311)
.++.++.+.+.|+||+++ +-|..||..++.+.+.+. .+.+|.-+..++..+-++. ++.+ .|+..++.
T Consensus 25 l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~l-a~~a~~~Gadavlv 103 (292)
T 3daq_A 25 LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQA-SIQAKALGADAIML 103 (292)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHH-HHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHH-HHHHHHcCCCEEEE
Confidence 345566666677777666 235556655544444332 2344444443333332221 1111 12222211
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEE-------eeCCCCHHHHHHHHHc
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAV-------GFGISKPEHVQQVAGW 271 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v-------GfGIst~e~v~~v~~~ 271 (311)
...... + .....+.++.++|.+.+++||++ |..++ ++.+.++.+.
T Consensus 104 ~~P~y~-~-~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~-~~~~~~La~~ 155 (292)
T 3daq_A 104 ITPYYN-K-TNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIE-PETVEILSQH 155 (292)
T ss_dssp ECCCSS-C-CCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCC-HHHHHHHHTS
T ss_pred CCCCCC-C-CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCC-HHHHHHHhcC
Confidence 111111 0 11234555566665555666554 44453 5666666653
No 398
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.73 E-value=0.57 Score=45.63 Aligned_cols=209 Identities=13% Similarity=0.088 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHcCC-ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc---CC-----CCCCCCChHHHHHHHHHHHH
Q 021527 49 GLAETFTRLKKQGK-VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG---VP-----YSDPLADGPVIQAAATRSLA 119 (311)
Q Consensus 49 ~i~~~f~~~~~~~~-~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG---~P-----fsDP~aDGp~Iq~a~~~Al~ 119 (311)
.-.+.|.++..+.. +.+ ..++|--|. -.++.++++|.+.|=+. +- .+..+-|+-
T Consensus 49 ~~a~~Lr~ll~~~~~~~~--~~~~Ga~d~----~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~g----------- 111 (435)
T 3lg3_A 49 NGAKKLWELLHGGSRKGY--INCLGALTG----GQALQQAKAGVEAIYMSGWQVAADANTASSMYPDQS----------- 111 (435)
T ss_dssp HHHHHHHHHHTTTSSSSS--EEEEBCCSH----HHHHHHHHHTCCSEEECHHHHHHHCCTTCSCCCSSS-----------
T ss_pred HHHHHHHHHHHhhccCCc--EEeCCCCcH----HHHHHHHHcCCCEEEechHHHhcccchhccCCCCcC-----------
Confidence 45567776665521 122 334454432 33444577799999883 11 122233321
Q ss_pred cCCCHHHHHHHHHHhhcc--------------------C--CCcEEEE---ecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 120 RGTNFNAILSMLKEVVPQ--------------------M--SCPIALF---TYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 120 ~G~~~~~~~~~i~~ir~~--------------------~--~iPiilm---~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
-.+.+++++.+++|.+. + .+||++. ||-|+. .+.+.++.+.++|+.|+.+=
T Consensus 112 -l~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~~~~d~~lPviaD~DtGyG~~~---~v~~tv~~~~~aGaaGi~IE 187 (435)
T 3lg3_A 112 -LYPVDSVPAVVKRINNSFRRADQIQWSNNIEPGSKGYTDYFLPIVADAEAGFGGVL---NAFELMKAMIEAGAAGVHFE 187 (435)
T ss_dssp -CSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTCSSSHH---HHHHHHHHHHHHTCSEEEEE
T ss_pred -cCcHHHHHHHHHHHHHHHHhhhhhhhhccccccccccccCCCCeEEECCCCCCCcH---HHHHHHHHHHHcCCEEEEEe
Confidence 13445555555555321 2 2999998 476654 24678889999999999997
Q ss_pred CC----------------ChhhHH-HHHHHH---HHcCCCeEEEe-CC--------------------------------
Q 021527 175 DV----------------PLEETE-SLQKEA---MKNKIELVLFT-TP-------------------------------- 201 (311)
Q Consensus 175 Dl----------------p~ee~~-~~~~~~---~~~gi~~I~li-sp-------------------------------- 201 (311)
|- |.+|.. +++... +..|.+.++.. +.
T Consensus 188 Dq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~ 267 (435)
T 3lg3_A 188 DQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTR 267 (435)
T ss_dssp SBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEEC
T ss_pred cCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccccchhhccccccccccccc
Confidence 73 344533 333322 22466655432 11
Q ss_pred CChH---HHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCC---------CHHH----H
Q 021527 202 TTPT---DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGIS---------KPEH----V 265 (311)
Q Consensus 202 ~t~~---eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIs---------t~e~----v 265 (311)
...+ +|.+.+++ .-..||+.+ +. ....++.++.+.++......++++ |.+ +.++ .
T Consensus 268 ~gld~AI~Ra~AY~~-GAD~if~E~-----~~--~~~~ei~~f~~~v~~~~P~~~La~-~~sPsfnw~~~~~d~~~~~f~ 338 (435)
T 3lg3_A 268 AGIEQAISRGLAYAP-YADLVWCET-----ST--PDLALAKRFADAVHAQFPGKLLAY-NCSPSFNWKKNLTDQQIASFQ 338 (435)
T ss_dssp CSHHHHHHHHHHHGG-GCSEEEECC-----SS--CCHHHHHHHHHHHHHHSTTCEEEE-ECCSSSCHHHHSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc-cCCEEEecC-----CC--CCHHHHHHHHHHhccccCCeEEEe-CCCCCccccccCCHHHHHHHH
Confidence 1122 44444444 334456533 11 123446677777776444555443 332 1223 5
Q ss_pred HHHHHcCCcEEEEhhHhhchhh
Q 021527 266 QQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 266 ~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.++.++|..-++++.+..+...
T Consensus 339 ~eLa~lG~~~v~~~la~~raa~ 360 (435)
T 3lg3_A 339 DELSAMGYKYQFITLAGIHSMW 360 (435)
T ss_dssp HHHHHTTEEEEEETTHHHHHHH
T ss_pred HHHHHcCCcEEEeCcHHHHHHH
Confidence 7788899999999999988664
No 399
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=94.70 E-value=0.59 Score=44.60 Aligned_cols=135 Identities=16% Similarity=0.128 Sum_probs=91.0
Q ss_pred cEEEEEeC-CC--CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--
Q 021527 64 ALIPYITA-GD--PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-- 138 (311)
Q Consensus 64 ~li~yi~~-G~--P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-- 138 (311)
.+-.|.+. |. .+.+.+.+.++.+.+.|.+.+++-+ .+ -+++.-.+.++.+|+.+
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~------g~---------------~~~~~d~e~v~avR~avG~ 219 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKV------GQ---------------PNCAEDIRRLTAVREALGD 219 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEEC------CC---------------SCHHHHHHHHHHHHHHHCS
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEec------CC---------------CCHHHHHHHHHHHHHHcCC
Confidence 34456664 32 3778899999999999999999842 11 12334456777777753
Q ss_pred CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCce
Q 021527 139 SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGF 218 (311)
Q Consensus 139 ~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gf 218 (311)
++++.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 220 d~~l~vDa--n~------------------------~~~~~~ai~~~~~l~~~~i~~iE--qP----------------- 254 (398)
T 2pp0_A 220 EFPLMVDA--NQ------------------------QWDRETAIRMGRKMEQFNLIWIE--EP----------------- 254 (398)
T ss_dssp SSCEEEEC--TT------------------------CSCHHHHHHHHHHHGGGTCSCEE--CC-----------------
T ss_pred CCeEEEEC--CC------------------------CCCHHHHHHHHHHHHHcCCceee--CC-----------------
Confidence 57776642 21 11346666777777777776431 11
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.++++++.+++||+.+-.+.++++++++++.| +|.+.+-
T Consensus 255 ---------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 255 ---------------LDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp ---------------SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred ---------------CChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 111223567888888899999999999999999998776 7888764
No 400
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=94.68 E-value=0.67 Score=41.02 Aligned_cols=104 Identities=12% Similarity=0.206 Sum_probs=65.7
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEe-CCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCC
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT-TPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASIS 235 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~li-sp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~ 235 (311)
.+.++.+.+.|++-+=+..-.....+.+++.++++. +..... +.- ..++.+...+..-.|+ + +|. .+
T Consensus 32 ~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~l~vgaGtvl-~~d~~~~A~~aGAd~v--~-----~p~---~d 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP-DFLIAAGTVL-TAEQVVLAKSSGADFV--V-----TPG---LN 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT-TCEEEEESCC-SHHHHHHHHHHTCSEE--E-----CSS---CC
T ss_pred HHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCc-CcEEeeCcEe-eHHHHHHHHHCCCCEE--E-----ECC---CC
Confidence 456788899999988776433333333444666664 333322 333 3466655545444444 3 221 12
Q ss_pred chHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 236 GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 236 ~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.+.++..|+ .+.|++.| ++|++++.+..+.|||.+-+
T Consensus 100 ---~~v~~~ar~-~g~~~i~G--v~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 ---PKIVKLCQD-LNFPITPG--VNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp ---HHHHHHHHH-TTCCEECE--ECSHHHHHHHHHTTCCEEEE
T ss_pred ---HHHHHHHHH-hCCCEEec--cCCHHHHHHHHHCCCCEEEE
Confidence 244666666 67888886 99999999999999999866
No 401
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=94.62 E-value=0.58 Score=45.18 Aligned_cols=132 Identities=14% Similarity=0.098 Sum_probs=88.4
Q ss_pred cEEEEEeCCC---CCh-hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-
Q 021527 64 ALIPYITAGD---PDL-STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM- 138 (311)
Q Consensus 64 ~li~yi~~G~---P~~-~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~- 138 (311)
.+-.|-+ |+ .+. +.+.+.++.+.+.|.+.+++-+- + +++.-++.++.+|+.+
T Consensus 171 ~vp~~~s-g~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g------~----------------~~~~d~e~v~avR~avG 227 (428)
T 3bjs_A 171 RIPAYAG-GIALGYQPKESLAEEAQEYIARGYKALKLRIG------D----------------AARVDIERVRHVRKVLG 227 (428)
T ss_dssp CEEEEEE-SSCSCSCCHHHHHHHHHHHHHHTCSEEEEECC------S----------------CHHHHHHHHHHHHHHHC
T ss_pred ceeeeee-ccccCCChHHHHHHHHHHHHHCCCCEEEECCC------C----------------CHHHHHHHHHHHHHhcC
Confidence 3444644 32 455 88888899989999999998421 1 2334456777787753
Q ss_pred -CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 139 -SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 139 -~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
++++.+-. |. -+..+++.++.+.+.++|+..+- .|
T Consensus 228 ~d~~l~vDa--n~------------------------~~~~~eai~~~~~L~~~~i~~iE--qP---------------- 263 (428)
T 3bjs_A 228 DEVDILTDA--NT------------------------AYTMADARRVLPVLAEIQAGWLE--EP---------------- 263 (428)
T ss_dssp TTSEEEEEC--TT------------------------CCCHHHHHHHHHHHHHTTCSCEE--CC----------------
T ss_pred CCCEEEEEC--CC------------------------CCCHHHHHHHHHHHHhcCCCEEE--CC----------------
Confidence 56776532 21 12346777777778888776431 11
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhcCC-CcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKESST-KPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~-~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
++++..+..+++++.++ +||+.+-.+.++++++++++.| +|.+.+
T Consensus 264 ----------------~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 264 ----------------FACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp ----------------SCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred ----------------CCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 11122456888888888 9999999999999999999766 577765
No 402
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=94.61 E-value=0.86 Score=38.05 Aligned_cols=121 Identities=12% Similarity=0.150 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcC-----
Q 021527 47 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG----- 121 (311)
Q Consensus 47 m~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G----- 121 (311)
|..++..|.+.. ..++.++...+.||--.-...-+...|..+|.+.+-+|.-- | -..+.+ .+.+.+
T Consensus 4 l~~l~~~~~~~~-~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~--p---~e~lv~---aa~~~~~diV~ 74 (161)
T 2yxb_A 4 LQSTRERVLGTP-RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ--T---PEQVAM---AAVQEDVDVIG 74 (161)
T ss_dssp -------------CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC--C---HHHHHH---HHHHTTCSEEE
T ss_pred HHHHHHHHHhhc-CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC--C---HHHHHH---HHHhcCCCEEE
Confidence 444566665421 12334444555565433334445566777888888887321 1 112222 222232
Q ss_pred ------CCHHHHHHHHHHhhcc-C-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHH
Q 021527 122 ------TNFNAILSMLKEVVPQ-M-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETES 183 (311)
Q Consensus 122 ------~~~~~~~~~i~~ir~~-~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~ 183 (311)
.+.+.+-+.++.+++. . ++||++-|.. ..+..+.+.+.|+|+++.+|.+.+++.+
T Consensus 75 lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~-------~~~~~~~l~~~G~d~v~~~~~~~~~~~~ 137 (161)
T 2yxb_A 75 VSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTI-------PIPDLEPLRSLGIREIFLPGTSLGEIIE 137 (161)
T ss_dssp EEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECC-------CHHHHHHHHHTTCCEEECTTCCHHHHHH
T ss_pred EEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCC-------chhcHHHHHHCCCcEEECCCCCHHHHHH
Confidence 2345556666677654 2 5777777642 1223345677888888778776555433
No 403
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.61 E-value=1.6 Score=39.89 Aligned_cols=121 Identities=15% Similarity=0.190 Sum_probs=75.4
Q ss_pred CccEEEEEeCCCC-ChhhHHHHHHHHHHCCCCEEEEc-CCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--
Q 021527 62 KVALIPYITAGDP-DLSTTAEALKLLDSCGSDIIELG-VPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-- 137 (311)
Q Consensus 62 ~~~li~yi~~G~P-~~~~~~e~~~~L~~~GaD~IElG-~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~-- 137 (311)
...++.=+.-||- +.+...+.++.+.++|+..|.|- --+ | .|..+ ++.++..+-|+.+++.
T Consensus 76 ~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~--~--~~k~l-----------~~~~e~~~~I~aa~~a~~ 140 (275)
T 2ze3_A 76 AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG--L--TPTEL-----------YDLDSQLRRIEAARAAID 140 (275)
T ss_dssp SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS--S--SSSCB-----------CCHHHHHHHHHHHHHHHH
T ss_pred CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC--C--CCCcc-----------CCHHHHHHHHHHHHHhHh
Confidence 4567777788886 67889999999999999999993 111 0 11000 2344444455555432
Q ss_pred -CCCcEEEEecCcchhc-------cCHHHHHHH---HHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeEEEeC
Q 021527 138 -MSCPIALFTYYNPILK-------RGVDNFMST---VRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELVLFTT 200 (311)
Q Consensus 138 -~~iPiilm~Y~n~i~~-------~g~~~fi~~---~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I~lis 200 (311)
..+|+.+.+--+.... .|.++-+++ +.++|+|+++++-+| .++..++ +++..+.......
T Consensus 141 ~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i---~~~~~~P~n~~~~ 212 (275)
T 2ze3_A 141 ASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRAL---ADALRVPLNVMAF 212 (275)
T ss_dssp HHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHH---HHHCSSCEEEECC
T ss_pred hcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH---HHhcCCCEEEecC
Confidence 3688888764443322 256777764 577999999998887 3555544 4555565544433
No 404
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=94.60 E-value=3.7 Score=40.20 Aligned_cols=171 Identities=13% Similarity=0.146 Sum_probs=91.7
Q ss_pred HHHHHHHHcCC-ccEEEEE----eCCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH
Q 021527 52 ETFTRLKKQGK-VALIPYI----TAGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 124 (311)
Q Consensus 52 ~~f~~~~~~~~-~~li~yi----~~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~ 124 (311)
+.++++++..+ ..+..++ ..|+-.+ +...+.++.+.++|+|.+.+-.+.||. .
T Consensus 68 e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~----~---------------- 127 (464)
T 2nx9_A 68 QRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV----R---------------- 127 (464)
T ss_dssp HHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT----H----------------
T ss_pred HHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH----H----------------
Confidence 34445444322 3344444 2365333 235677888899999999997666664 1
Q ss_pred HHHHHHHHHhhccCCCcEE-EEecCcchhccCHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHH-cCCCe
Q 021527 125 NAILSMLKEVVPQMSCPIA-LFTYYNPILKRGVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMK-NKIEL 195 (311)
Q Consensus 125 ~~~~~~i~~ir~~~~iPii-lm~Y~n~i~~~g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~-~gi~~ 195 (311)
++.+.++.+++. ...+. -.+|.. -..+..+ ++++.+.++|+|.|.++| +.+++..++...+++ .++.+
T Consensus 128 -ni~~~i~~ak~~-G~~v~~~i~~~~-~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i 204 (464)
T 2nx9_A 128 -NMQQALQAVKKM-GAHAQGTLCYTT-SPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVEL 204 (464)
T ss_dssp -HHHHHHHHHHHT-TCEEEEEEECCC-CTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCE
T ss_pred -HHHHHHHHHHHC-CCEEEEEEEeee-CCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeE
Confidence 222344444443 22222 123321 1122333 456678899999999987 446777777777655 34443
Q ss_pred EEEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhh
Q 021527 196 VLFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKE 247 (311)
Q Consensus 196 I~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~ 247 (311)
-+-...+.--.-...++....|...+- |..| -|.+++ ++.+.+++..++.
T Consensus 205 ~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g-~gertG-N~~lE~lv~~L~~ 255 (464)
T 2nx9_A 205 HLHCHSTAGLADMTLLKAIEAGVDRVDTAISS-MSGTYG-HPATESLVATLQG 255 (464)
T ss_dssp EEEECCTTSCHHHHHHHHHHTTCSEEEEBCGG-GCSTTS-CCBHHHHHHHHTT
T ss_pred EEEECCCCChHHHHHHHHHHhCCCEEEEeccc-cCCCCc-CHHHHHHHHHHHh
Confidence 333433333233334444456666663 3333 344433 3345666666654
No 405
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=94.54 E-value=0.87 Score=42.61 Aligned_cols=202 Identities=15% Similarity=0.230 Sum_probs=108.5
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEE---cCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIEL---GVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IEl---G~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
..+-.|+..+.| +.++.+...|+|+|=| -+.|-| .-|.|..+... +.+.+.++. ...
T Consensus 18 ~~~~l~~n~~~p------~~~~~a~~~GadgVGL~RtE~l~ld-~e~~p~~~~q~----------~~~~~~~~~---~~~ 77 (324)
T 2xz9_A 18 KKVMLAANIGTP------KDVASALANGAEGVGLFRTEFLYMD-RNSLPSEEEQF----------EAYKEVVEK---MGG 77 (324)
T ss_dssp CEEEEEEEESSG------GGHHHHHHTTCSSEEEECCGGGTSS-SSSCCCHHHHH----------HHHHHHHHH---TTT
T ss_pred CEEEEEEECCCH------HHHHHHHhCCCCeEeehhhhhhhcc-CCCCCCHHHHH----------HHHHHHHHH---hCC
Confidence 346789999999 6778888999998721 112212 11233322111 111222222 235
Q ss_pred CcEEEEecC----------------cchhc-cCH-------H------HHHHHHHHcCCcEEEecCCC-hhh---HHHHH
Q 021527 140 CPIALFTYY----------------NPILK-RGV-------D------NFMSTVRDIGIRGLVVPDVP-LEE---TESLQ 185 (311)
Q Consensus 140 iPiilm~Y~----------------n~i~~-~g~-------~------~fi~~~~~aGadGviipDlp-~ee---~~~~~ 185 (311)
.|+++-+.. ||..- +|+ + +-+.++.+.|.++|++|-+- .+| +.++.
T Consensus 78 ~~v~VR~~d~g~dk~~~~~~~~~E~nP~LG~RgiR~~l~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v 157 (324)
T 2xz9_A 78 RPVTIRTLDIGGDKELPYLDMPKEMNPFLGYRAIRLCLDRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSIL 157 (324)
T ss_dssp SCEEEECCCCBGGGCCTTTCCCCCSCGGGSSBTHHHHHHCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHH
T ss_pred CceEEEeCCCCcchhhhhhccccccCcccccceeeeeccchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHH
Confidence 678776532 44310 111 1 12233444599999999664 355 44444
Q ss_pred HHHHH----cCC------CeEEEeCCCChH--HHHHHHHHhCCceEEEEe------cCCcc-------CCCCCCCchHHH
Q 021527 186 KEAMK----NKI------ELVLFTTPTTPT--DRMKAIVEASEGFVYLVS------SIGVT-------GARASISGHVQT 240 (311)
Q Consensus 186 ~~~~~----~gi------~~I~lisp~t~~--eri~~i~~~a~gfiY~vs------~~G~T-------G~~~~~~~~~~~ 240 (311)
+.++. .|+ .+..++ .|+. ..+.+|++. -.|+.+.+ ..|+. ..-....+.+..
T Consensus 158 ~~~~~~~r~~G~~~~~~~~vg~mI--Etp~av~~~d~Ia~~-vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ 234 (324)
T 2xz9_A 158 EEVKAELDREGVKYDKEIKVGIMV--EIPSAAVTADILAKE-VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILR 234 (324)
T ss_dssp HHHHHHHHHHTCCCCTTCEEEEEE--CSHHHHHTHHHHTTT-CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHH
T ss_pred HHHHHHHHhcCCCCCCCcEEEEEE--CcHHHHHHHHHHHHh-CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHH
Confidence 43332 343 333444 4553 445666654 44555531 22211 001123456777
Q ss_pred HHHHHhhc---CCCcEEEeeCC-CCHHHHHHHHHcCCcEEEEhhHhhchhh
Q 021527 241 LLREIKES---STKPVAVGFGI-SKPEHVQQVAGWGADGVIVGSAMVKLLG 287 (311)
Q Consensus 241 ~l~~vk~~---~~~Pv~vGfGI-st~e~v~~v~~~GADGvIVGSaiv~~~~ 287 (311)
.++++-+. .++|+-+-+.+ .+++.+..+.+.|.|++.+++.-+-.+.
T Consensus 235 ai~~vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG~~~~si~p~~i~~~~ 285 (324)
T 2xz9_A 235 LVKMVIDAAHKEGKFAAMCGEMAGDPLAAVILLGLGLDEFSMSATSIPEIK 285 (324)
T ss_dssp HHHHHHHHHHHTTCEEEECSGGGGCHHHHHHHHHHTCCEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHCCceeecCccCCCHHHHHHHHHCCCCEEEEChhHHHHHH
Confidence 77776443 37887443333 4799999999999999999986555443
No 406
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=94.52 E-value=0.032 Score=53.46 Aligned_cols=41 Identities=27% Similarity=0.380 Sum_probs=37.2
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
.+.++++|+.+++||+++ |+.++++++.+.++|+|+++|+.
T Consensus 214 ~~~i~~i~~~~~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs~ 254 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVK-GLLSAEDADRCIAEGADGVILSN 254 (380)
T ss_dssp HHHHHHHHHHCCSEEEEE-EECCHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEE-ecCcHHHHHHHHHcCCCEEEEcC
Confidence 478999999999999998 68999999999999999999954
No 407
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=94.50 E-value=0.53 Score=45.99 Aligned_cols=90 Identities=9% Similarity=-0.033 Sum_probs=57.7
Q ss_pred EEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCC-CCC----------ChHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 021527 65 LIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSD-PLA----------DGPVIQAAATRSLARGTNFNAILSMLKE 133 (311)
Q Consensus 65 li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsD-P~a----------DGp~Iq~a~~~Al~~G~~~~~~~~~i~~ 133 (311)
++.=+.++ -+.++..++++.++++|+|.|-+-+-... +.. .|+.+... .++++++
T Consensus 300 V~vKispd-~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~-------------sl~~i~~ 365 (443)
T 1tv5_A 300 VFVKLAPD-LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDI-------------STKFICE 365 (443)
T ss_dssp EEEEECSC-CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHH-------------HHHHHHH
T ss_pred EEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHH-------------HHHHHHH
Confidence 44444443 33458899999999999999999654321 111 13333221 2568888
Q ss_pred hhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 134 VVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 134 ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
+++.+ ++||+..+-.. . .+.+.++..+|||+|-+.
T Consensus 366 v~~~v~~~iPVIg~GGI~-----s-~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 366 MYNYTNKQIPIIASGGIF-----S-GLDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHTTTCSCEEEESSCC-----S-HHHHHHHHHTTEEEEEES
T ss_pred HHHHcCCCCcEEEECCCC-----C-HHHHHHHHHcCCCEEEEc
Confidence 88887 89999986322 1 234455566899999874
No 408
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=94.44 E-value=2 Score=40.45 Aligned_cols=124 Identities=10% Similarity=0.036 Sum_probs=80.5
Q ss_pred HHHHHHHHHHcCCccEEEEEe-CCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYIT-AGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIL 128 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~-~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~ 128 (311)
..+.++.+++.=..-+-..+- .|--+.++..+.++.|++.|+ +|| +|+.| +
T Consensus 175 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE------~P~~~---------------------~ 226 (379)
T 2rdx_A 175 DIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE------QPCRS---------------------Y 226 (379)
T ss_dssp HHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE------CCSSS---------------------H
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe------CCcCC---------------------H
Confidence 445566665431111222332 222356788999999999999 988 34322 2
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCC----ChhhHHHHHHHHHHcCCCeEEEeCCCCh
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV----PLEETESLQKEAMKNKIELVLFTTPTTP 204 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl----p~ee~~~~~~~~~~~gi~~I~lisp~t~ 204 (311)
+..+++++.+++||..-...+ +.++|.+.+.+-.+|.+.+ |+ .+.+..++...++++|+...+-....++
T Consensus 227 ~~~~~l~~~~~iPI~~de~i~-----~~~~~~~~i~~~~~d~v~i-k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 227 EECQQVRRVADQPMKLDECVT-----GLHMAQRIVADRGAEICCL-KISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHHTTCCSCEEECTTCC-----SHHHHHHHHHHTCCSEEEE-ETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHHhhCCCCEEEeCCcC-----CHHHHHHHHHcCCCCEEEE-eccccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 466788888999998865432 4455666556666888655 33 2568888999999999998777556666
Q ss_pred HHH
Q 021527 205 TDR 207 (311)
Q Consensus 205 ~er 207 (311)
...
T Consensus 301 i~~ 303 (379)
T 2rdx_A 301 IAS 303 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 409
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.44 E-value=0.19 Score=47.79 Aligned_cols=107 Identities=10% Similarity=-0.052 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCC-CCEEEEcCCC----------CCCC---------CCh
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCG-SDIIELGVPY----------SDPL---------ADG 107 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~G-aD~IElG~Pf----------sDP~---------aDG 107 (311)
..+.+.++.+++.-++.+..=+.++. +.+.+.++++.+.++| +|.|-+-+-+ ..|. +.|
T Consensus 179 e~~~~il~av~~~~~~PV~vKi~p~~-d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG 257 (354)
T 4ef8_A 179 DAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG 257 (354)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEECCCC-SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG
T ss_pred HHHHHHHHHHHHhhCCCeEEEecCCC-CHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCC
Confidence 35677777777766777888888876 6778888999999998 9999763221 1111 134
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 108 PVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 108 p~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
+.+...+ ++++.++++.. ++||+..+-.. ..+ .+.++..+|+|+|-+.
T Consensus 258 ~~i~p~a-------------~~~i~~v~~~~~~ipII~~GGI~-----s~~-da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 258 RYVLPTA-------------LANINAFYRRCPGKLIFGCGGVY-----TGE-DAFLHVLAGASMVQVG 306 (354)
T ss_dssp GGGHHHH-------------HHHHHHHHHHCTTSEEEEESCCC-----SHH-HHHHHHHHTEEEEEEC
T ss_pred CCCchHH-------------HHHHHHHHHhCCCCCEEEECCcC-----CHH-HHHHHHHcCCCEEEEh
Confidence 4443332 45788888765 79999876321 123 3444456899999884
No 410
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.42 E-value=0.35 Score=44.54 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=10.2
Q ss_pred HHHHHHHHHHcCCcEEEe
Q 021527 156 VDNFMSTVRDIGIRGLVV 173 (311)
Q Consensus 156 ~~~fi~~~~~aGadGvii 173 (311)
.++.++.+.+.|+||+++
T Consensus 23 l~~lv~~li~~Gv~gi~v 40 (297)
T 2rfg_A 23 LAGLVDWQIKHGAHGLVP 40 (297)
T ss_dssp HHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 345555555666666555
No 411
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.35 E-value=1.8 Score=40.43 Aligned_cols=185 Identities=11% Similarity=0.084 Sum_probs=97.2
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc-CCCCCCC---CChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG-VPYSDPL---ADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ 137 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG-~PfsDP~---aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~ 137 (311)
...++.=+.-||-+.+...+.++.+.++|+..|.|- --+ -|. ..|..+ +..++..+-|+.+++.
T Consensus 101 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~-~k~cgH~~gk~L-----------~p~~e~~~rI~Aa~~A 168 (318)
T 1zlp_A 101 NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVW-PKKCGHMRGKAV-----------VPAEEHALKIAAAREA 168 (318)
T ss_dssp SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCS-SCCCSSSSCCCB-----------CCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCC-CccccCCCCCcc-----------CCHHHHHHHHHHHHHh
Confidence 566777777788788889999999999999999983 100 000 001000 1222222333333322
Q ss_pred -CCCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCCh-hhHHHHHHHHHHcCCCeEEEeC-----CCChHHH
Q 021527 138 -MSCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVPL-EETESLQKEAMKNKIELVLFTT-----PTTPTDR 207 (311)
Q Consensus 138 -~~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp~-ee~~~~~~~~~~~gi~~I~lis-----p~t~~er 207 (311)
...++.+.+--+.....|+++-+++ +.++|+|+++++-+|- ++.. ..+++..+..+..++ |..+.+.
T Consensus 169 ~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~---~i~~~l~~P~lan~~~~g~~~~~~~~e 245 (318)
T 1zlp_A 169 IGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELK---EVSAKTKGLRIANMIEGGKTPLHTPEE 245 (318)
T ss_dssp HTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHH---HHHHHSCSEEEEEECTTSSSCCCCHHH
T ss_pred cccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHH---HHHHhcCCCEEEEeccCCCCCCCCHHH
Confidence 2345666654444444567777764 5779999999988773 4444 444555555443333 4444444
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHc
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGW 271 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~ 271 (311)
+.+..-.++.+ |.+..+.. ...+.+..+.+++. +...+ --+.-+.+++.++...
T Consensus 246 ---L~~lGv~~v~~----~~~~~raa-~~a~~~~~~~l~~~g~~~~~--~~~~~~~~el~~l~~~ 300 (318)
T 1zlp_A 246 ---FKEMGFHLIAH----SLTAVYAT-ARALVNIMKILKEKGTTRDD--LDQMATFSEFNELISL 300 (318)
T ss_dssp ---HHHHTCCEEEE----CSHHHHHH-HHHHHHHHHHHHHHSCSTTC--GGGSCCHHHHHHHHTH
T ss_pred ---HHHcCCeEEEE----chHHHHHH-HHHHHHHHHHHHHcCCcccc--cccCCCHHHHHHhcCH
Confidence 44444444433 22222211 12244556666653 21111 1233355666665543
No 412
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.32 E-value=0.24 Score=45.70 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=35.8
Q ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 237 HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 237 ~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
.+++.++.++. ++|+.+-+||+ ++++.++.+.|+|++.||+.+..
T Consensus 229 ~~k~av~~v~~--~ipi~AsGGIt-~eni~~~a~tGvD~IsVgs~~~~ 273 (286)
T 1x1o_A 229 ALREAVRRVGG--RVPLEASGNMT-LERAKAAAEAGVDYVSVGALTHS 273 (286)
T ss_dssp HHHHHHHHHTT--SSCEEEESSCC-HHHHHHHHHHTCSEEECTHHHHS
T ss_pred HHHHHHHHhCC--CCeEEEEcCCC-HHHHHHHHHcCCCEEEEcHHHcC
Confidence 34444555543 58999999996 89999999999999999987764
No 413
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=94.30 E-value=2.5 Score=43.74 Aligned_cols=146 Identities=13% Similarity=0.117 Sum_probs=80.0
Q ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecC----cchh-c
Q 021527 79 TAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYY----NPIL-K 153 (311)
Q Consensus 79 ~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~----n~i~-~ 153 (311)
..+.++.+.++|+|.+.+-...+| ++++-..++.+++.-..-.+..+|. ++.- .
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~---------------------l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~ 257 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNY---------------------LPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTK 257 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCC---------------------HHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCT
T ss_pred hHHHHHHHHhcCcCEEEEEecHHH---------------------HHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCC
Confidence 467888888999999999644432 2233344555554322112223454 2221 1
Q ss_pred cCHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc--CCCeEEEeCCCChHHHHHHHHHhCCceEEE-Ee
Q 021527 154 RGVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN--KIELVLFTTPTTPTDRMKAIVEASEGFVYL-VS 223 (311)
Q Consensus 154 ~g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~--gi~~I~lisp~t~~eri~~i~~~a~gfiY~-vs 223 (311)
+..+ ++++.+.++|++-|.++| +.+++..++...+++. ++.+-+-...+.--.-...++....|...+ .+
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~t 337 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVA 337 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEec
Confidence 1333 455667889999999998 4467777777776653 344333333333223333444445676666 34
Q ss_pred cCCccCCCCCCCchHHHHHHHHhh
Q 021527 224 SIGVTGARASISGHVQTLLREIKE 247 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~ 247 (311)
..|. |.+++ ++.+.+++..++.
T Consensus 338 i~Gl-GertG-N~~lE~vv~~L~~ 359 (718)
T 3bg3_A 338 ADSM-SGMTS-QPSMGALVACTRG 359 (718)
T ss_dssp CGGG-CSTTS-CCBHHHHHHHHTT
T ss_pred Cccc-ccccC-chhHHHHHHHHHh
Confidence 4443 44433 3345666666654
No 414
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.30 E-value=3.3 Score=39.19 Aligned_cols=181 Identities=12% Similarity=0.009 Sum_probs=101.2
Q ss_pred CChhhHHHHHHHHHHCCCCEEEEc--------CCCCCCCCC----hHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 74 PDLSTTAEALKLLDSCGSDIIELG--------VPYSDPLAD----GPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 74 P~~~~~~e~~~~L~~~GaD~IElG--------~PfsDP~aD----Gp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
=+++...+.++...++|||++=+| -|++ .... |...-. .. -..|...+ -+..+++.+++.++|
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~-~~fq~~~~~~~~y~-~~--~~~~l~~e-~~~~L~~~~~~~Gi~ 106 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEA-KQVIPGNADVSIYE-IM--ERCALNEE-DEIKLKEYVESKGMI 106 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGG-GGCCCTTCSSCHHH-HH--HHHCCCHH-HHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcch-hccccCCCCccHHH-HH--HHhCCCHH-HHHHHHHHHHHhCCe
Confidence 367899999999999999999998 5644 1111 111111 11 12355554 456777777888988
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHH---HHHHHhCCce
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRM---KAIVEASEGF 218 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri---~~i~~~a~gf 218 (311)
++--.+ + .+-++.+.+.|+|.+=|+---.-. ..|.+.+.+.|-.+++-....|.+|.. +.+.+....+
T Consensus 107 ~~st~~-d-------~~svd~l~~~~v~~~KI~S~~~~n-~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~i 177 (349)
T 2wqp_A 107 FISTLF-S-------RAAALRLQRMDIPAYKIGSGECNN-YPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPY 177 (349)
T ss_dssp EEEEEC-S-------HHHHHHHHHHTCSCEEECGGGTTC-HHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCE
T ss_pred EEEeeC-C-------HHHHHHHHhcCCCEEEECcccccC-HHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCE
Confidence 776332 1 345666677789988886221112 235566666785544433344433321 2222223345
Q ss_pred EEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEE---eeCCCCHHHHHHHHHcCCc
Q 021527 219 VYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAV---GFGISKPEHVQQVAGWGAD 274 (311)
Q Consensus 219 iY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~v---GfGIst~e~v~~v~~~GAD 274 (311)
+.|- ++++..+..+.-....+..+|+.+ ++||.. ..|+ .-......+|||
T Consensus 178 iLlh---c~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~---~~~~AAvAlGA~ 231 (349)
T 2wqp_A 178 ALLH---CTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDN---YACLGAVALGGS 231 (349)
T ss_dssp EEEE---CCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSS---HHHHHHHHHTCC
T ss_pred EEEe---ccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCcH---HHHHHHHHhCCC
Confidence 5553 344332221111235588888988 899844 1243 334445568999
No 415
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.28 E-value=1 Score=41.11 Aligned_cols=170 Identities=15% Similarity=0.094 Sum_probs=97.4
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
|.-|.+.+.+.++.+.++|+|.|-+.--- -+++ -.+.++-.++++.+.+..+- |+.-+-.|..
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~------------~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t 77 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTT----GLGP------------ALSKDEKRQNLNALYDVTHK-LIFQVGSLNL 77 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTT----TTGG------------GSCHHHHHHHHHHHTTTCSC-EEEECCCSCH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc----cChh------------hCCHHHHHHHHHHHHHHhCC-eEEeeCCCCH
Confidence 55677899999999999999999884111 0111 14566777788888776544 5544433322
Q ss_pred hccCHHHHHHHHHHcCCcEEEec--C----CChhhHHH-HHHHHHHcCCCeEEEeCC-----CChHHHHHHHHHhCCceE
Q 021527 152 LKRGVDNFMSTVRDIGIRGLVVP--D----VPLEETES-LQKEAMKNKIELVLFTTP-----TTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGviip--D----lp~ee~~~-~~~~~~~~gi~~I~lisp-----~t~~eri~~i~~~a~gfi 219 (311)
. ..-+..+.+.++|+||+++. - ...++..+ |...++..++..+++=.| +.+.+-+.++ .++
T Consensus 78 ~--~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L-----nIv 150 (288)
T 2nuw_A 78 N--DVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL-----PVK 150 (288)
T ss_dssp H--HHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT-----TEE
T ss_pred H--HHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc-----EEE
Confidence 1 12356777888999999883 2 22244444 556667778877665433 2233433332 333
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.+=. .+| ++ ..+.++++. .+.-|+.|.. +.+-..+.. +||+|-|++
T Consensus 151 giKd---ssg-------d~-~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~-~~G~is~~a 197 (288)
T 2nuw_A 151 GIKD---TNQ-------DL-AHSLEYKLNLPGVKVYNGSN----TLIYYSLLS-LDGVVASFT 197 (288)
T ss_dssp EEEE---CCS-------CH-HHHHHHHHHSTTCEEEECCG----GGHHHHHTT-SSEEECGGG
T ss_pred EEEe---CCC-------CH-HHHHHHHhcCCCeEEEECcH----HHHHHHHHH-hCEEEecHH
Confidence 2210 111 12 234444441 1345655543 345555567 999999876
No 416
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=94.28 E-value=0.68 Score=43.41 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=0.0
Q ss_pred CccEEEEEeCCC-CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 62 KVALIPYITAGD-PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 62 ~~~li~yi~~G~-P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
+..+..+.+.|. ++.+.+.+.++.+.+.|.+.+++-+ +|-.| ++.++.+|+.+.-
T Consensus 127 ~~~~~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~---~~~~~---------------------~e~v~avr~~~g~ 182 (368)
T 1sjd_A 127 RDSVPCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKI---EPGWD---------------------VEPVRAVRERFGD 182 (368)
T ss_dssp CSEEEBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC---BTTBS---------------------HHHHHHHHHHHCT
T ss_pred CCCccceEEeeCCCCHHHHHHHHHHHHHhCccEEEEec---CchhH---------------------HHHHHHHHHhcCC
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
-+-++.-.|. -+..++ .++.+.+.++|+..+-
T Consensus 183 ~~~l~vDan~------------------------~~~~~~-~~~~~~l~~~~i~~iE----------------------- 214 (368)
T 1sjd_A 183 DVLLQVDANT------------------------AYTLGD-APQLARLDPFGLLLIE----------------------- 214 (368)
T ss_dssp TSEEEEECTT------------------------CCCGGG-HHHHHTTGGGCCSEEE-----------------------
T ss_pred CceEEEeccC------------------------CCCHHH-HHHHHHHHhcCCCeEe-----------------------
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
..+++...+..+++++.+++||+.+-.+.++++++++++.| +|.+.+
T Consensus 215 -----------~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 215 -----------QPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp -----------CCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred -----------CCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
No 417
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.25 E-value=1.9 Score=39.97 Aligned_cols=123 Identities=12% Similarity=0.194 Sum_probs=73.4
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcC---CCHHHHHHHHHHhh---
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG---TNFNAILSMLKEVV--- 135 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G---~~~~~~~~~i~~ir--- 135 (311)
...++.=+.-||-+.+...+.++.+.++|+..|.|- |-+. | .+ + ..-.| ++.++..+-|+..+
T Consensus 80 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iE----Dq~~--~--Kr-c--gh~~gk~l~~~~e~~~rI~Aa~~A~ 148 (302)
T 3fa4_A 80 STPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIE----DQVQ--T--KR-C--GHLAGKILVDTDTYVTRIRAAVQAR 148 (302)
T ss_dssp TSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEEC----SBCC--C------------CCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEEC----CCCC--C--cc-c--CCCCCCeecCHHHHHHHHHHHHHHH
Confidence 456777777788777788899999999999999993 2111 0 00 0 00011 23333333333332
Q ss_pred ccCCCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCChhhHHHHHHHHHHc-CCCeEE
Q 021527 136 PQMSCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVPLEETESLQKEAMKN-KIELVL 197 (311)
Q Consensus 136 ~~~~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp~ee~~~~~~~~~~~-gi~~I~ 197 (311)
++.+.+++++.-.+.+...|+++-+++ +.++|+|++.++-+. ..+++...++.. +..++.
T Consensus 149 ~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~--~~~ei~~~~~~~~~~Pl~~ 212 (302)
T 3fa4_A 149 QRIGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGIT--SREMARQVIQDLAGWPLLL 212 (302)
T ss_dssp HHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTCC--CHHHHHHHHHHTTTSCEEE
T ss_pred HhcCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCCC--CHHHHHHHHHHhcCCceeE
Confidence 223567888765555556788888775 477999999888654 233455555554 344433
No 418
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.23 E-value=0.33 Score=45.02 Aligned_cols=112 Identities=13% Similarity=0.242 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHcCCcEEEe-------cCCChhhHHHHHHHHHHcC--CCeEEEeCCCChHHHHHHHHHh-CCceEEEEec
Q 021527 155 GVDNFMSTVRDIGIRGLVV-------PDVPLEETESLQKEAMKNK--IELVLFTTPTTPTDRMKAIVEA-SEGFVYLVSS 224 (311)
Q Consensus 155 g~~~fi~~~~~aGadGvii-------pDlp~ee~~~~~~~~~~~g--i~~I~lisp~t~~eri~~i~~~-a~gfiY~vs~ 224 (311)
+.++.++.+.+.|+||+++ +-|..||..++.+.+.+.- +.+|.-+..+++.+-++..... ..|+..+...
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 3456777777888888777 3466677666666555542 3344444434444333221111 1233333222
Q ss_pred CCccCCCCCCCchHHHHHHHHhhcCC--CcEEE-------eeCCCCHHHHHHHHH
Q 021527 225 IGVTGARASISGHVQTLLREIKESST--KPVAV-------GFGISKPEHVQQVAG 270 (311)
Q Consensus 225 ~G~TG~~~~~~~~~~~~l~~vk~~~~--~Pv~v-------GfGIst~e~v~~v~~ 270 (311)
... .. .....+.++.+.|.+.++ +||++ |..++ +|.+.++.+
T Consensus 110 ~P~--~~-~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~-~~~~~~La~ 160 (313)
T 3dz1_A 110 PPP--SL-RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMT-PKVIRQIVM 160 (313)
T ss_dssp CCT--TC-CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCC-HHHHHHHHH
T ss_pred CCC--CC-CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCC-HHHHHHHHH
Confidence 121 11 123456667777766666 88766 55664 777877764
No 419
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=94.23 E-value=1 Score=42.70 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=88.4
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHC-CCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSC-GSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~-GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
.+-.|.+.|..+.+...+.++.+.+. |...+=+-+-.. +.++-++.++.+|+.+ ++
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------------~~~~d~~~v~avR~a~g~~~ 195 (383)
T 3i4k_A 137 KVDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------------DPAEDTRRVAELAREVGDRV 195 (383)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------------CHHHHHHHHHHHHHTTTTTS
T ss_pred eEEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------------CHHHHHHHHHHHHHHcCCCC
Confidence 34456666666678888888877766 999988743211 2234456788888764 46
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+-. |.- +..+++.++.+.++++|+..|- .|
T Consensus 196 ~l~vDa--n~~------------------------~~~~~A~~~~~~l~~~~i~~iE--qP------------------- 228 (383)
T 3i4k_A 196 SLRIDI--NAR------------------------WDRRTALHYLPILAEAGVELFE--QP------------------- 228 (383)
T ss_dssp EEEEEC--TTC------------------------SCHHHHHHHHHHHHHTTCCEEE--SC-------------------
T ss_pred EEEEEC--CCC------------------------CCHHHHHHHHHHHHhcCCCEEE--CC-------------------
Confidence 666642 311 1235666677777777766542 11
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+-
T Consensus 229 -------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 275 (383)
T 3i4k_A 229 -------------TPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALK 275 (383)
T ss_dssp -------------SCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred -------------CChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEc
Confidence 112223557788888889999999999999999998765 7888774
No 420
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=94.22 E-value=0.059 Score=48.35 Aligned_cols=111 Identities=14% Similarity=0.191 Sum_probs=61.8
Q ss_pred HHHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEe----CCCChHHHHHHHHHh--CCceEEE
Q 021527 159 FMSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFT----TPTTPTDRMKAIVEA--SEGFVYL 221 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~li----sp~t~~eri~~i~~~--a~gfiY~ 221 (311)
-++.+.+.|+|-|=+. ++. .+|...+++.|...-+++|+=. .|.++ +.+.+.++. ..|..|+
T Consensus 85 E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~-eei~~a~~ia~~aGADfV 163 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGE-PLLADVCRVARDAGADFV 163 (231)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCH-HHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCH-HHHHHHHHHHHHHCcCEE
Confidence 3456788898876442 221 1234445555532222222211 11233 333333333 3477777
Q ss_pred EecCCcc--CCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCc--EE
Q 021527 222 VSSIGVT--GARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGAD--GV 276 (311)
Q Consensus 222 vs~~G~T--G~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GAD--Gv 276 (311)
=+.+|.+ |. ... +-++.+|+. .+++|-+.+||++.+++.+++++||+ |.
T Consensus 164 KTSTGf~~~~g---At~---edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGt 218 (231)
T 3ndo_A 164 KTSTGFHPSGG---ASV---QAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGL 218 (231)
T ss_dssp ECCCSCCTTCS---CCH---HHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred EcCCCCCCCCC---CCH---HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhccc
Confidence 6666643 32 112 223333443 36899999999999999999999999 66
No 421
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=94.17 E-value=0.73 Score=43.48 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=88.5
Q ss_pred EEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCcEE
Q 021527 66 IPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCPIA 143 (311)
Q Consensus 66 i~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iPii 143 (311)
-.|.+.|..+.+...+.++.+.+.|...+=+-+- .+.++-++.++.+|+.+ ++++.
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG----------------------~~~~~d~~~v~avR~~~g~~~~l~ 188 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVG----------------------GSKELDVERIRMIREAAGDSITLR 188 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECC----------------------SCHHHHHHHHHHHHHHHCSSSEEE
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEec----------------------CCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4466677777788999999988999999887421 11223356777777753 56666
Q ss_pred EEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEe
Q 021527 144 LFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVS 223 (311)
Q Consensus 144 lm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs 223 (311)
+- .|.- +..+++.++.+.++++|+..+- .|
T Consensus 189 vD--aN~~------------------------~~~~~A~~~~~~l~~~~i~~iE--qP---------------------- 218 (368)
T 3q45_A 189 ID--ANQG------------------------WSVETAIETLTLLEPYNIQHCE--EP---------------------- 218 (368)
T ss_dssp EE--CTTC------------------------BCHHHHHHHHHHHGGGCCSCEE--CC----------------------
T ss_pred EE--CCCC------------------------CChHHHHHHHHHHhhcCCCEEE--CC----------------------
Confidence 53 2311 1235566666677777766542 11
Q ss_pred cCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 224 SIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 224 ~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+--
T Consensus 219 ----------~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 219 ----------VSRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp ----------BCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred ----------CChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEech
Confidence 111122457788888899999999999999999998754 68887753
No 422
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.17 E-value=3.1 Score=37.47 Aligned_cols=116 Identities=17% Similarity=0.265 Sum_probs=67.5
Q ss_pred CCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-C
Q 021527 61 GKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-S 139 (311)
Q Consensus 61 ~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~ 139 (311)
|++.+..=++ ..+.+...+.++.+.+.|+|+||+=+=|-+.. .+.+++.+.+.++|+.. +
T Consensus 18 g~PkIcvpl~--~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~-----------------~~~~~v~~~l~~lr~~~~~ 78 (258)
T 4h3d_A 18 GRPKICVPII--GKNKKDIIKEAKELKDACLDIIEWRVDFFENV-----------------ENIKEVKEVLYELRSYIHD 78 (258)
T ss_dssp SSCEEEEEEC--CSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTT-----------------TCHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEEeC--CCCHHHHHHHHHHHhhcCCCEEEEeecccccc-----------------CCHHHHHHHHHHHHHhcCC
Confidence 5554443333 35678888999999999999999964332111 13345556777887764 6
Q ss_pred CcEEEEecCcchhccC-----HHH---HHHHHHHcC-CcEEEe-cCCChhhHHHHHHHHHHcCCCeEE
Q 021527 140 CPIALFTYYNPILKRG-----VDN---FMSTVRDIG-IRGLVV-PDVPLEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g-----~~~---fi~~~~~aG-adGvii-pDlp~ee~~~~~~~~~~~gi~~I~ 197 (311)
+|+++- |- +....| -+. +.+.+.+.| +|-+=+ -+.+.+...++.+.+++.|.++|.
T Consensus 79 lPiI~T-~R-t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~ 144 (258)
T 4h3d_A 79 IPLLFT-FR-SVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVII 144 (258)
T ss_dssp SCEEEE-CC-CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEE-Ee-chhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEE
Confidence 897764 32 222222 232 344555555 565422 123323345677777888877664
No 423
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=94.14 E-value=0.91 Score=41.41 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=96.8
Q ss_pred hhhHHHHHHHHHHCCCCE--EEE--cC-----CCCCCC-CChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEE
Q 021527 76 LSTTAEALKLLDSCGSDI--IEL--GV-----PYSDPL-ADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALF 145 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~--IEl--G~-----PfsDP~-aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm 145 (311)
.+...+.++.|.+.|.+. +.+ -. |-+.|+ . .|..+++.++++++++++..+|+.--
T Consensus 16 ~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf--------------~G~g~~~GL~~l~~~~~e~Glp~~te 81 (267)
T 2nwr_A 16 EELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSF--------------RGHGLEYGVKALRKVKEEFGLKITTD 81 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSC--------------CCSCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCC--------------cCccHHHHHHHHHHHHHhcCCeEEEe
Confidence 467888888888875443 333 21 555554 2 33457778899999988899998774
Q ss_pred ecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC--ChHHH---HHHHHHhCCceEE
Q 021527 146 TYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT--TPTDR---MKAIVEASEGFVY 220 (311)
Q Consensus 146 ~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~--t~~er---i~~i~~~a~gfiY 220 (311)
. +++. -++.+.+ .+|-+-++-.-..... +..++.+.| .+|.+-+.+ +..+. .+.+......-+.
T Consensus 82 ~-~d~~-------~~~~l~~-~vd~~~IgA~~~rn~~-ll~~~a~~~-~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~ 150 (267)
T 2nwr_A 82 I-HESW-------QAEPVAE-VADIIQIPAFLCRQTD-LLLAAAKTG-RAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIY 150 (267)
T ss_dssp C-SSGG-------GHHHHHT-TCSEEEECGGGTTCHH-HHHHHHTTT-SEEEEECCTTCCGGGGHHHHHHHHHTTCSSEE
T ss_pred c-CCHH-------hHHHHHh-cCCEEEECcccccCHH-HHHHHHcCC-CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 3 2322 2233334 5899888843333333 444455566 456666655 33322 2222222322333
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEE----------eeCCCC-------HHHHHHHHHcCCcEEEEhhHhh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAV----------GFGISK-------PEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~v----------GfGIst-------~e~v~~v~~~GADGvIVGSaiv 283 (311)
+.-+.+..+.. ....++ ..+..+|+. + ||++ |+|=++ +.-+.+....||||++|=|-+.
T Consensus 151 L~~rG~~~~y~-~~~~dl-~~i~~lk~~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~ 226 (267)
T 2nwr_A 151 LTERGTTFGYN-NLVVDF-RSLPIMKQW-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPE 226 (267)
T ss_dssp EEECCEECSSS-CEECCT-THHHHHTTT-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESC
T ss_pred EEECCCCCCCC-ccccCH-HHHHHHHHc-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCC
Confidence 32111111211 100122 246677776 5 9988 444333 3445666789999999987765
No 424
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=94.12 E-value=0.22 Score=46.69 Aligned_cols=209 Identities=11% Similarity=0.091 Sum_probs=118.2
Q ss_pred HHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhh
Q 021527 56 RLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVV 135 (311)
Q Consensus 56 ~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir 135 (311)
+++++-....++|+++++-+.+.+.+++..+.+.|++-+--|-|-++.. .+..+....+++++..
T Consensus 83 ~i~~~~gi~~v~Hltc~~~t~~ei~~~L~~~~~~GI~niLRGDpp~~~~---------------~~~~~~~A~~l~~~~~ 147 (315)
T 3ijd_A 83 NYLKDLKIPKIIYRCVGKYTPDEFRRLTRPVSGQDAFSVFVGAASRNQS---------------VLLKLSDAYKIRQDVN 147 (315)
T ss_dssp HHCTTSCSCEEEEEEGGGSCHHHHHHHHSCCTTCCCEEEEECCCC-------------------CCSCHHHHHHHHHHHC
T ss_pred HHHHHhCCCceeeeeeCCCCHHHHHHHHHHHHHcCCcEEecCCCCCCCC---------------CCcCHHHHHHHHHhcC
Confidence 3333434578999999999999999999999999998886785554421 1112222234444332
Q ss_pred ccCCCcEEEEecCcchhccCH---HHHHHHHHHcCCcEEEecCC-ChhhHHHHH----HHHHHcCC---CeEEEeCCCCh
Q 021527 136 PQMSCPIALFTYYNPILKRGV---DNFMSTVRDIGIRGLVVPDV-PLEETESLQ----KEAMKNKI---ELVLFTTPTTP 204 (311)
Q Consensus 136 ~~~~iPiilm~Y~n~i~~~g~---~~fi~~~~~aGadGviipDl-p~ee~~~~~----~~~~~~gi---~~I~lisp~t~ 204 (311)
.+.-|.+-+|-+ .+... -+.++.=.++|||-++--=+ ..+...+|. +.|++.|+ ..++-+.|-++
T Consensus 148 --~~F~IGvA~yPe--~H~~~~~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s 223 (315)
T 3ijd_A 148 --PDLLLGGVAIPE--RHMKNTDEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGS 223 (315)
T ss_dssp --TTSEEEEEECGG--GHHHHSCHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCS
T ss_pred --CCEEEEEEECCC--CCCCHHHHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCC
Confidence 234466666644 21111 12333345799998766422 124455666 67888887 46677888877
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEE--EEhhHh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGV--IVGSAM 282 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGv--IVGSai 282 (311)
...++.+ . +.|. .+|.. +++++.+.-+ |..+|.-+. .|+++++++. +||+ =+|-.+
T Consensus 224 ~k~~~f~-~-------------~~G~--~IP~~---l~~~l~~~~d-~~~~Gi~~a-~e~~~~L~~~-~~g~~~p~G~ni 281 (315)
T 3ijd_A 224 TKTLEFM-K-------------WLGI--SIPRW---LENDLMNCED-ILNKSVSLS-KSIFNELMEF-CLEKGIPIGCNI 281 (315)
T ss_dssp HHHHHHH-H-------------HHTC--CCCHH---HHHHHHTTCC-CHHHHHHHH-HHHHHHHHHH-HHHHTCCEEEEE
T ss_pred HHHHHHH-h-------------cCCC--CCCHH---HHHHHHhCCC-HHHHHHHHH-HHHHHHHHHh-cCcCCcCCCccH
Confidence 6554332 1 1232 46654 4555544434 544566565 5888888877 6533 333222
Q ss_pred hchhhhcCCchhHHHHHHHHHHHHHhh
Q 021527 283 VKLLGEAQSPEEGLKELEKFAKSLKSA 309 (311)
Q Consensus 283 v~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (311)
.... ..++.++.--++.+.+|.-
T Consensus 282 esv~----~rk~ei~as~~l~~~~~~~ 304 (315)
T 3ijd_A 282 ESVS----VRKVEIEASIALAKDIKYI 304 (315)
T ss_dssp EECC----SCHHHHHHHHHHHHHHHHH
T ss_pred HHHH----hHHHHHHHHHHHHHHHHHH
Confidence 2211 1244455555666666653
No 425
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=94.12 E-value=2.1 Score=40.44 Aligned_cols=136 Identities=10% Similarity=0.020 Sum_probs=91.6
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
..+-.|.+.|..+.+...+.++.+.+.|.+.+-+-+-. +.++-.+.++.+|+.+ ++
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------------~~~~d~~~v~avR~a~g~~~ 190 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------------DVERDIARIRDVEDIREPGE 190 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------------CHHHHHHHHHHHTTSCCTTC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------------CHHHHHHHHHHHHHHcCCCc
Confidence 34556777777778899999999999999999885311 2234467888888875 56
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+- .|.- +..+++.++.+.+.++|+ .+- .
T Consensus 191 ~l~vD--an~~------------------------~~~~~a~~~~~~l~~~~i-~iE--q-------------------- 221 (378)
T 3eez_A 191 IVLYD--VNRG------------------------WTRQQALRVMRATEDLHV-MFE--Q-------------------- 221 (378)
T ss_dssp EEEEE--CTTC------------------------CCHHHHHHHHHHTGGGTC-CEE--C--------------------
T ss_pred eEEEE--CCCC------------------------CCHHHHHHHHHHhccCCe-EEe--c--------------------
Confidence 66553 2311 112445555555555554 220 0
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHhh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAMV 283 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSaiv 283 (311)
.++ + .+.++++|+.+++||+.|-.+.++++++++++.| +|.+.+.-.-.
T Consensus 222 ------------P~~-~-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~ 271 (378)
T 3eez_A 222 ------------PGE-T-LDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRV 271 (378)
T ss_dssp ------------CSS-S-HHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred ------------CCC-C-HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhc
Confidence 111 1 2457888888999999999999999999999766 79998864443
No 426
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.12 E-value=1 Score=41.98 Aligned_cols=112 Identities=14% Similarity=0.172 Sum_probs=69.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCC---ChHHHHHHHHHHHHcC---CCHHHHHHHHHHh--
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLA---DGPVIQAAATRSLARG---TNFNAILSMLKEV-- 134 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~a---DGp~Iq~a~~~Al~~G---~~~~~~~~~i~~i-- 134 (311)
..++.=+.-||-+.+...+.++.+.++|+..|.|- |-.. -|.. .| +..++..+-|+..
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iE----Dq~~~k~cgh~----------~gk~l~~~~e~~~rI~Aa~~ 154 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLE----DQILTKRCGHL----------SGKKVVSRDEYLVRIRAAVA 154 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEC----CBCCCC------------------CBCCHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEc----CCCCCcccCCC----------CCCeecCHHHHHHHHHHHHH
Confidence 56676667787777788899999999999999993 2111 1100 01 2333322223222
Q ss_pred -hccCCCcEEEEecCcchhccCHHHHHHHH---HHcCCcEEEecCCCh-hhHHHHHHHH
Q 021527 135 -VPQMSCPIALFTYYNPILKRGVDNFMSTV---RDIGIRGLVVPDVPL-EETESLQKEA 188 (311)
Q Consensus 135 -r~~~~iPiilm~Y~n~i~~~g~~~fi~~~---~~aGadGviipDlp~-ee~~~~~~~~ 188 (311)
++..+.+++++.-.+.....|+++-++++ .++|+|++.++-++- |+..++.+.+
T Consensus 155 A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~ 213 (307)
T 3lye_A 155 TKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAAL 213 (307)
T ss_dssp HHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHH
T ss_pred HHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHc
Confidence 33346678887655555556888888754 679999999987653 4444444443
No 427
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=94.10 E-value=1.7 Score=41.35 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=83.1
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
..+.++.+++.+.+.-+..+.-++ .+.++...++|+|.+.+-++.||- +. - ..+.+.++.++
T Consensus 53 ~~~~~~~i~~~~~~~~v~~~~r~~------~~di~~a~~~g~~~v~i~~~~s~~----------~~-~-~~~~s~~e~l~ 114 (382)
T 2ztj_A 53 SRKDAEVLASLGLKAKVVTHIQCR------LDAAKVAVETGVQGIDLLFGTSKY----------LR-A-PHGRDIPRIIE 114 (382)
T ss_dssp HHHHHHHHHTSCCSSEEEEEEESC------HHHHHHHHHTTCSEEEEEECC--------------------CCCHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEcccC------hhhHHHHHHcCCCEEEEEeccCHH----------HH-H-HhCCCHHHHHH
Confidence 345566666555443332222222 244677788999999998777762 11 1 34556555444
Q ss_pred ----HHHHhhccCCCcEEEEecCcchhccCHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc---CCCe
Q 021527 130 ----MLKEVVPQMSCPIALFTYYNPILKRGVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN---KIEL 195 (311)
Q Consensus 130 ----~i~~ir~~~~iPiilm~Y~n~i~~~g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~---gi~~ 195 (311)
.++.+++.-...-+-+ ++...+++..+ +.++.+.++ ++.+.++| +.+++..++.+.+++. ++.+
T Consensus 115 ~~~~~v~~ak~~g~~~~v~~-~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i 192 (382)
T 2ztj_A 115 EAKEVIAYIREAAPHVEVRF-SAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDI 192 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEE-EETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHHcCCCEEEEE-EEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeE
Confidence 3444444321112222 33345555554 345567778 99999988 4467777777777664 3333
Q ss_pred EEEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCC
Q 021527 196 VLFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARAS 233 (311)
Q Consensus 196 I~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~ 233 (311)
-+-...+.--.-...++....|..++- |..| -|.+++
T Consensus 193 ~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~G-lGeraG 230 (382)
T 2ztj_A 193 EFHGHNDTGCAIANAYEAIEAGATHVDTTILG-IGERNG 230 (382)
T ss_dssp EEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGG-CSSTTC
T ss_pred EEEeCCCccHHHHHHHHHHHhCCCEEEEcccc-cccccc
Confidence 233333332233334444456776663 4443 344443
No 428
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.07 E-value=2.2 Score=39.25 Aligned_cols=107 Identities=17% Similarity=0.309 Sum_probs=67.6
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.||..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 79 ~grvpVi--aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~------------------s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 79 DGKIPVI--VGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKP------------------TQEGLYQHYKYISERTD 138 (306)
T ss_dssp TTSSCEE--EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHTTCS
T ss_pred CCCCeEE--EcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhCC
Confidence 3555554 456888999999999999999999999998884321 22455677788888889
Q ss_pred CcEEEEecCcchhccCH---HHHHHHHH-Hc-CCcEEEecCCChhhHHHHHHHHH
Q 021527 140 CPIALFTYYNPILKRGV---DNFMSTVR-DI-GIRGLVVPDVPLEETESLQKEAM 189 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~---~~fi~~~~-~a-GadGviipDlp~ee~~~~~~~~~ 189 (311)
+||++ |-+|- ++|. .+.+.++. +. .+-|+=...-..+...++++.+.
T Consensus 139 lPiil--Yn~P~-~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~~ 190 (306)
T 1o5k_A 139 LGIVV--YNVPG-RTGVNVLPETAARIAADLKNVVGIXEANPDIDQIDRTVSLTK 190 (306)
T ss_dssp SCEEE--EECHH-HHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHHHHHHHHHH
T ss_pred CCEEE--EeCcc-ccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHhcC
Confidence 99887 55554 2232 23344443 32 23444333323345555555444
No 429
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.03 E-value=1.9 Score=40.41 Aligned_cols=166 Identities=11% Similarity=0.086 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCCc-cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 51 AETFTRLKKQGKV-ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 51 ~~~f~~~~~~~~~-~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
.+.++++++..+. .+..+..+|.-. .+.++...++|+|.+.+-.|.+|- .. ..+
T Consensus 70 ~e~l~~i~~~~~~~~i~~l~~p~~~~----~~~i~~a~~aGvd~v~I~~~~s~~----~~-----------------~~~ 124 (345)
T 1nvm_A 70 LEYIEAVAGEISHAQIATLLLPGIGS----VHDLKNAYQAGARVVRVATHCTEA----DV-----------------SKQ 124 (345)
T ss_dssp HHHHHHHHTTCSSSEEEEEECBTTBC----HHHHHHHHHHTCCEEEEEEETTCG----GG-----------------GHH
T ss_pred HHHHHHHHhhCCCCEEEEEecCCccc----HHHHHHHHhCCcCEEEEEEeccHH----HH-----------------HHH
Confidence 4455555544333 333333333322 457777888999999997666552 11 122
Q ss_pred HHHHhhccCCCcEEEEecCcchhccCHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHcC---CCeEEEe
Q 021527 130 MLKEVVPQMSCPIALFTYYNPILKRGVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKNK---IELVLFT 199 (311)
Q Consensus 130 ~i~~ir~~~~iPiilm~Y~n~i~~~g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~g---i~~I~li 199 (311)
.++..++. ...+.... .....+..+ +.++.+.+.|++-|-++| +.+++..++.+.++++- +.+-+-.
T Consensus 125 ~i~~ak~~-G~~v~~~~--~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 125 HIEYARNL-GMDTVGFL--MMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp HHHHHHHH-TCEEEEEE--ESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred HHHHHHHC-CCEEEEEE--EeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 33333332 22332221 112233443 455567889999999998 34677777777777652 3322222
Q ss_pred CCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHh
Q 021527 200 TPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIK 246 (311)
Q Consensus 200 sp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk 246 (311)
..+.--.-...++....|..++- +..| -|.+++. ..+++++.-++
T Consensus 202 Hn~~G~avAn~laA~~aGa~~vd~tv~G-lG~~aGN-~~le~lv~~L~ 247 (345)
T 1nvm_A 202 HHNLSLGVANSIVAVEEGCDRVDASLAG-MGAGAGN-APLEVFIAVAE 247 (345)
T ss_dssp BCTTSCHHHHHHHHHHTTCCEEEEBGGG-CSSTTCB-CBHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHcCCCEEEecchh-ccCCccC-cCHHHHHHHHH
Confidence 22222222233334445666663 4444 3444332 33455555554
No 430
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=94.00 E-value=4.5 Score=40.44 Aligned_cols=171 Identities=12% Similarity=0.127 Sum_probs=91.5
Q ss_pred HHHHHHHHcCC-ccEEEEE----eCCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH
Q 021527 52 ETFTRLKKQGK-VALIPYI----TAGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 124 (311)
Q Consensus 52 ~~f~~~~~~~~-~~li~yi----~~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~ 124 (311)
+.+.++++..+ ..+..++ ..|+-.+ +...+.++.+.++|+|.+.+-.+.||- .
T Consensus 85 e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~----~---------------- 144 (539)
T 1rqb_A 85 ERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP----R---------------- 144 (539)
T ss_dssp HHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT----H----------------
T ss_pred HHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH----H----------------
Confidence 34445544322 3344444 2365433 235677888899999999997666663 1
Q ss_pred HHHHHHHHHhhccCCCcE-EEEecCcchhccCHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHH-c--CC
Q 021527 125 NAILSMLKEVVPQMSCPI-ALFTYYNPILKRGVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMK-N--KI 193 (311)
Q Consensus 125 ~~~~~~i~~ir~~~~iPi-ilm~Y~n~i~~~g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~-~--gi 193 (311)
++.+.++.+++. ...+ +.++|.. -..+..+ ++++.+.++|+|.|.++| +.+.+..++...+++ . ++
T Consensus 145 -ni~~~i~~ak~~-G~~v~~~i~~~~-~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i 221 (539)
T 1rqb_A 145 -NMAHAMAAVKKA-GKHAQGTICYTI-SPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKT 221 (539)
T ss_dssp -HHHHHHHHHHHT-TCEEEEEEECCC-STTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTC
T ss_pred -HHHHHHHHHHHC-CCeEEEEEEeee-CCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCc
Confidence 223445555543 2222 1223321 1223333 456678889999999988 446677777666654 3 44
Q ss_pred CeEEEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhh
Q 021527 194 ELVLFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKE 247 (311)
Q Consensus 194 ~~I~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~ 247 (311)
.+-+-...+.--.-...++....|...+- +..| -|.+++ +..+.+++..++.
T Consensus 222 ~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g-~GertG-N~~lE~lv~~L~~ 274 (539)
T 1rqb_A 222 QINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISS-MSLGPG-HNPTESVAEMLEG 274 (539)
T ss_dssp CEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGG-GCSTTS-BCBHHHHHHHTTT
T ss_pred eEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccc-cCCCcc-ChhHHHHHHHHHh
Confidence 44344443333233333444456766663 3433 344433 3445666666654
No 431
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.00 E-value=1.8 Score=40.01 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=71.8
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc--C-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-c
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG--V-PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP-Q 137 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG--~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~-~ 137 (311)
...++.=+.-||-+.+...+.++.+.++|+..|.|- . |-.-.-..|..+ +..++..+-|+..++ +
T Consensus 83 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l-----------~~~~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 83 NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKEC-----------VPAGEMVDRIKAAVDAR 151 (298)
T ss_dssp CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCB-----------CCHHHHHHHHHHHHHHC
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCee-----------cCHHHHHHHHHHHHHhc
Confidence 455776666788777888999999999999999993 1 100000011100 122222223322222 2
Q ss_pred CCCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeEE
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I~ 197 (311)
.+.+++++.--+.....|+++-+++ +.++|+|++.++-++ .||..++ +++.+..++.
T Consensus 152 ~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~---~~~~~~Pl~~ 212 (298)
T 3eoo_A 152 TDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRF---KEAVKVPILA 212 (298)
T ss_dssp SSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHH---HHHHCSCBEE
T ss_pred cCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHH---HHHcCCCeEE
Confidence 3566777765555555677777765 477999999998775 3444444 4444555443
No 432
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.99 E-value=0.54 Score=44.37 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=55.4
Q ss_pred HHHHHHHHHHcCCcEEEe-------cCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh-CCceEEEEecCCc
Q 021527 156 VDNFMSTVRDIGIRGLVV-------PDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA-SEGFVYLVSSIGV 227 (311)
Q Consensus 156 ~~~fi~~~~~aGadGvii-------pDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~-a~gfiY~vs~~G~ 227 (311)
.++.++.+.+.|+||+++ +-|..||..++.+....-.+.+|.-+..+++.+-++..... ..|+..++.....
T Consensus 49 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 49 LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 355666677777777766 23556666555554323335555555544444333221111 1133222211111
Q ss_pred cCCCCCCCchHHHHHHHHhh-cCCCcEEE------eeCCCCHHHHHHH-HHc
Q 021527 228 TGARASISGHVQTLLREIKE-SSTKPVAV------GFGISKPEHVQQV-AGW 271 (311)
Q Consensus 228 TG~~~~~~~~~~~~l~~vk~-~~~~Pv~v------GfGIst~e~v~~v-~~~ 271 (311)
.. +......+.++.+.|.+ .+++||++ |..+ ++|.+.++ .+.
T Consensus 129 y~-~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l-~~e~~~~L~a~~ 178 (344)
T 2hmc_A 129 LS-RGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFAT-RADLFFALRAEH 178 (344)
T ss_dssp SS-STTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCC-CHHHHHHHHHHC
T ss_pred cC-CCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCc-CHHHHHHHHhcC
Confidence 11 10113446666777766 66677554 3334 46777777 544
No 433
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.97 E-value=0.94 Score=41.72 Aligned_cols=137 Identities=18% Similarity=0.282 Sum_probs=90.3
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~i 140 (311)
+-+.. +.+-||.. .+-.+++.|.+.|+..+ +.+|-.- +-||.+=|.- .+.|.++++..++|++.++. ..+
T Consensus 96 PV~Ag-v~~~DP~~-~~g~~Le~lk~~Gf~Gv-~N~ptvg-lidG~fr~~L----EE~gm~~~~eve~I~~A~~~gL~Ti 167 (286)
T 2p10_A 96 PVLAG-VNGTDPFM-VMSTFLRELKEIGFAGV-QNFPTVG-LIDGLFRQNL----EETGMSYAQEVEMIAEAHKLDLLTT 167 (286)
T ss_dssp CEEEE-ECTTCTTC-CHHHHHHHHHHHTCCEE-EECSCGG-GCCHHHHHHH----HHTTCCHHHHHHHHHHHHHTTCEEC
T ss_pred CEEEE-ECCcCCCc-CHHHHHHHHHHhCCceE-EECCCcc-cccchhhhhH----hhcCCCHHHHHHHHHHHHHCCCeEE
Confidence 34445 88888876 45566699999999999 9877422 5678664431 27899999999999888763 223
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEec-CC------------Chh----hHHHHHHHHHHcCCCeEEEeC--C
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP-DV------------PLE----ETESLQKEAMKNKIELVLFTT--P 201 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviip-Dl------------p~e----e~~~~~~~~~~~gi~~I~lis--p 201 (311)
| |.+ . .+-.+.+.++|+|.+++. -+ ..+ ...+..+.+++.+-+.+.++. |
T Consensus 168 ~-----~v~-----~-~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGp 236 (286)
T 2p10_A 168 P-----YVF-----S-PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGP 236 (286)
T ss_dssp C-----EEC-----S-HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTT
T ss_pred E-----ecC-----C-HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCC
Confidence 3 222 2 345667889999987762 11 122 245667777888777666653 5
Q ss_pred CChHHHHHHHHHh---CCce
Q 021527 202 TTPTDRMKAIVEA---SEGF 218 (311)
Q Consensus 202 ~t~~eri~~i~~~---a~gf 218 (311)
-+..+....+.++ ..||
T Consensus 237 IstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 237 IANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp CCSHHHHHHHHHHCTTCCEE
T ss_pred CCCHHHHHHHHhcCCCccEE
Confidence 5555666666676 4555
No 434
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.96 E-value=1.6 Score=40.10 Aligned_cols=126 Identities=13% Similarity=0.177 Sum_probs=76.5
Q ss_pred HHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEc--C-CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHH
Q 021527 55 TRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELG--V-PYSDPLADGPVIQAAATRSLARGTNFNAILSML 131 (311)
Q Consensus 55 ~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG--~-PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i 131 (311)
+...+.-...++.=+.-||-+.+...+.++.+.++|++.|.|- . |-..--.+|.+ ++.++..+-|
T Consensus 75 ~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl------------~~~~e~~~~I 142 (287)
T 3b8i_A 75 TRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDL------------ICVEEGVGKI 142 (287)
T ss_dssp HHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCB------------CCHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCc------------cCHHHHHHHH
Confidence 3333333445777677777778889999999999999999982 1 11110112221 2333444455
Q ss_pred HHhhcc-CCCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCCh-hhHHHHHHHHHHcCCCeE
Q 021527 132 KEVVPQ-MSCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVPL-EETESLQKEAMKNKIELV 196 (311)
Q Consensus 132 ~~ir~~-~~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp~-ee~~~~~~~~~~~gi~~I 196 (311)
+.+++. ...++.+.+--+. ...|+++-+++ +.++|+|+++++-+|- ++.. ..+++..+..+
T Consensus 143 ~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~---~i~~~~~~P~i 208 (287)
T 3b8i_A 143 RAALEARVDPALTIIARTNA-ELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLE---AIAEHLHIPLM 208 (287)
T ss_dssp HHHHHHCCSTTSEEEEEEET-TTSCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHH---HHHTTCCSCEE
T ss_pred HHHHHcCCCCCcEEEEechh-hhcCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHH---HHHHhCCCCEE
Confidence 555432 2345666654344 45678887765 5779999999988772 4444 44455567666
No 435
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.95 E-value=0.13 Score=51.44 Aligned_cols=67 Identities=31% Similarity=0.355 Sum_probs=49.4
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.+|.+.+.+..-.++.+-+..| -...+.+.++.+|+.. ++|| ++++|.|+|.++.+.++|||+|-||
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahG-------hs~~v~~~i~~ik~~~p~~~v-iaGNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQG-------NSVYQIEFIKWIKQTYPKIDV-IAGNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCC-------CSHHHHHHHHHHHHHCTTSEE-EEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCcEEEEecccc-------ccHHHHHHHHHHHhhCCcceE-EeccccCHHHHHHHHHcCCCEEeec
Confidence 3677777665545554433332 2345678899999875 6777 6677888999999999999999997
No 436
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=93.92 E-value=0.15 Score=46.54 Aligned_cols=112 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred HHHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CCceEEEEecC
Q 021527 159 FMSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SEGFVYLVSSI 225 (311)
Q Consensus 159 fi~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~gfiY~vs~~ 225 (311)
-++.+.+.|||-|=+. ++. .+|...+++.|...-+++|+=..--+ ++.+...++. ..|..|+=+++
T Consensus 116 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt-~eei~~A~~ia~eaGADfVKTST 194 (260)
T 3r12_A 116 EAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLD-TEEKIAACVISKLAGAHFVKTST 194 (260)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC-HHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCC-HHHHHHHHHHHHHhCcCEEEcCC
Confidence 3456888899976542 221 12344455554322223332112223 3444444343 34777776665
Q ss_pred CccCCCCCCCchHHHHHHHHhhc--CCCcEEEeeCCCCHHHHHHHHHcCCc--EE
Q 021527 226 GVTGARASISGHVQTLLREIKES--STKPVAVGFGISKPEHVQQVAGWGAD--GV 276 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~--~~~Pv~vGfGIst~e~v~~v~~~GAD--Gv 276 (311)
|.... +... +-++.+|+. .+++|-+.+||+|.+++.+++++||+ |.
T Consensus 195 Gf~~~--GAT~---edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGt 244 (260)
T 3r12_A 195 GFGTG--GATA---EDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGT 244 (260)
T ss_dssp SSSSC--CCCH---HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCC--CCCH---HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeec
Confidence 53211 1122 223333333 36899999999999999999999999 66
No 437
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=93.90 E-value=0.73 Score=43.21 Aligned_cols=137 Identities=14% Similarity=0.110 Sum_probs=85.4
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~iP 141 (311)
.+-.|.+.|..+.+...+.++.+.+.|...+-+-+- .+ .++-++.++.+|+. .+++
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g-~~---------------------~~~d~~~v~avR~a~g~~~~ 185 (354)
T 3jva_A 128 QVITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVG-TG---------------------IEADIARVKAIREAVGFDIK 185 (354)
T ss_dssp EEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECC-SC---------------------HHHHHHHHHHHHHHHCTTSE
T ss_pred eeeeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeC-CC---------------------HHHHHHHHHHHHHHcCCCCe
Confidence 343456667777788899999988999999887421 11 12234567777765 3556
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-. |.- +..+++.++.+.++++|+..+
T Consensus 186 l~vDa--n~~------------------------~~~~~a~~~~~~L~~~~i~~i------------------------- 214 (354)
T 3jva_A 186 LRLDA--NQA------------------------WTPKDAVKAIQALADYQIELV------------------------- 214 (354)
T ss_dssp EEEEC--TTC------------------------SCHHHHHHHHHHTTTSCEEEE-------------------------
T ss_pred EEEEC--CCC------------------------CCHHHHHHHHHHHHhcCCCEE-------------------------
Confidence 55532 210 122444444444444443322
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhHh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSAM 282 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSai 282 (311)
. ..++++..+.++++++.+++||+.|-.+.+++++.++++.| +|.+.+--.-
T Consensus 215 E---------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 215 E---------QPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp E---------CCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred E---------CCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchh
Confidence 1 01222223567888888899999999999999999988654 6998885433
No 438
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=93.89 E-value=0.63 Score=42.72 Aligned_cols=114 Identities=10% Similarity=0.051 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCcEEEe-------cCCChhhHHHHHHHHHHc---CCCeEEEeCCCChHHHHHHHHHh-CCceEEEEec
Q 021527 156 VDNFMSTVRDIGIRGLVV-------PDVPLEETESLQKEAMKN---KIELVLFTTPTTPTDRMKAIVEA-SEGFVYLVSS 224 (311)
Q Consensus 156 ~~~fi~~~~~aGadGvii-------pDlp~ee~~~~~~~~~~~---gi~~I~lisp~t~~eri~~i~~~-a~gfiY~vs~ 224 (311)
.++.++.+.+.|+||+++ +-|..||..++.+.+.+. .+.+|.-+..++..+-++..... ..|...++..
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 456777777888888776 346667776666665543 23455555554544433222111 1243333222
Q ss_pred CCccCCCCCCCchHHHHHHHHhhcC---CCcEEE-------eeCCCCHHHHHHHH-Hc
Q 021527 225 IGVTGARASISGHVQTLLREIKESS---TKPVAV-------GFGISKPEHVQQVA-GW 271 (311)
Q Consensus 225 ~G~TG~~~~~~~~~~~~l~~vk~~~---~~Pv~v-------GfGIst~e~v~~v~-~~ 271 (311)
.... .+.....++.++.++|.+.+ ++||++ |..+ +++.+.++. +.
T Consensus 106 ~P~y-~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l-~~~~~~~La~~~ 161 (294)
T 3b4u_A 106 PPSY-FKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTL-SVELVGRLKAAF 161 (294)
T ss_dssp CCCS-SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCC-CHHHHHHHHHHC
T ss_pred CCcC-CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCC-CHHHHHHHHHhC
Confidence 1211 11012345666777777766 788765 3444 478887777 54
No 439
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=93.87 E-value=0.12 Score=46.14 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=60.5
Q ss_pred HHHHHHcCCcEEEec-CCC----------hhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHh--CCceEEEEecCC
Q 021527 160 MSTVRDIGIRGLVVP-DVP----------LEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEA--SEGFVYLVSSIG 226 (311)
Q Consensus 160 i~~~~~aGadGviip-Dlp----------~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~--a~gfiY~vs~~G 226 (311)
++. .+.|+|.|=+. ++. .+|...+++.|...++++|+=..--+ ++.+...++. ..|..|+=+++|
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt-~eei~~a~~ia~eaGADfVKTSTG 150 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLR-DEERYTLYDIIAEAGAHFIKSSTG 150 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC-HHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCC-HHHHHHHHHHHHHcCCCEEEeCCC
Confidence 345 66777766331 211 13445556666544445443211112 3334444443 246667766666
Q ss_pred cc--------CCCCCCCchHHHHHHH-Hhhc-CCCcEEEeeCCCCHHHHHHHHHc---CCc
Q 021527 227 VT--------GARASISGHVQTLLRE-IKES-STKPVAVGFGISKPEHVQQVAGW---GAD 274 (311)
Q Consensus 227 ~T--------G~~~~~~~~~~~~l~~-vk~~-~~~Pv~vGfGIst~e~v~~v~~~---GAD 274 (311)
.+ |...+...+..+++++ ++.. .++||-+.+||+|.+++.++.++ ||+
T Consensus 151 f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 151 FAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 54 0011222222233333 2322 24899999999999999999999 988
No 440
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=93.87 E-value=0.16 Score=46.51 Aligned_cols=48 Identities=15% Similarity=0.114 Sum_probs=37.7
Q ss_pred chHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 236 GHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 236 ~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.+.++.++.. .++|+.+-+|| +++++.++.+.|+|++.|||.+..
T Consensus 214 ~~l~~~v~~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~ 262 (273)
T 2b7n_A 214 LETKEIAAYRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQ 262 (273)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHT
T ss_pred HHHHHHHHHhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcC
Confidence 3444445555543 35899999999 589999999999999999999774
No 441
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.78 E-value=1.1 Score=41.08 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=51.5
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCP 141 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iP 141 (311)
|..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.+++|
T Consensus 77 rvpvi--aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~------------------s~~~l~~~f~~va~a~~lP 136 (301)
T 3m5v_A 77 KVKVL--AGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKP------------------TQQGLYEHYKAIAQSVDIP 136 (301)
T ss_dssp SCEEE--EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHCSSC
T ss_pred CCeEE--EeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC------------------CHHHHHHHHHHHHHhCCCC
Confidence 44444 456889999999999999999999999998884331 2235566777887778999
Q ss_pred EEEEecCcch
Q 021527 142 IALFTYYNPI 151 (311)
Q Consensus 142 iilm~Y~n~i 151 (311)
|++ |-+|-
T Consensus 137 iil--Yn~P~ 144 (301)
T 3m5v_A 137 VLL--YNVPG 144 (301)
T ss_dssp EEE--EECHH
T ss_pred EEE--EeCch
Confidence 987 54453
No 442
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=93.77 E-value=1.2 Score=35.96 Aligned_cols=98 Identities=18% Similarity=0.178 Sum_probs=62.9
Q ss_pred cEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhh
Q 021527 169 RGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKE 247 (311)
Q Consensus 169 dGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~ 247 (311)
.-+++=|=+ ....-+...+++.|...+..+. ...+.++.+.+.....+.+- ..-|. +-.++++++|+
T Consensus 14 rILiVDD~~-~~r~~l~~~L~~~G~~~v~~a~--~g~~al~~~~~~~~DlillD~~MP~m---------dG~el~~~ir~ 81 (134)
T 3to5_A 14 KILIVDDFS-TMRRIVKNLLRDLGFNNTQEAD--DGLTALPMLKKGDFDFVVTDWNMPGM---------QGIDLLKNIRA 81 (134)
T ss_dssp CEEEECSCH-HHHHHHHHHHHHTTCCCEEEES--SHHHHHHHHHHHCCSEEEEESCCSSS---------CHHHHHHHHHH
T ss_pred EEEEEeCCH-HHHHHHHHHHHHcCCcEEEEEC--CHHHHHHHHHhCCCCEEEEcCCCCCC---------CHHHHHHHHHh
Confidence 344444432 2344567778888987555433 34455555545444444442 11112 23578899986
Q ss_pred c---CCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 248 S---STKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 248 ~---~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
. .++||++=.+-.+.+++.+..+.|||+.+.
T Consensus 82 ~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~ 115 (134)
T 3to5_A 82 DEELKHLPVLMITAEAKREQIIEAAQAGVNGYIV 115 (134)
T ss_dssp STTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 4 368999999999999999999999999865
No 443
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.72 E-value=3.6 Score=37.30 Aligned_cols=154 Identities=12% Similarity=0.114 Sum_probs=79.3
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhh---ccCCCcEE--EEecCc-c-hh
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVV---PQMSCPIA--LFTYYN-P-IL 152 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir---~~~~iPii--lm~Y~n-~-i~ 152 (311)
.+.++.+.++|+|.|.+.++-|| . +. ....+.+.++.++.++++. ++..+++. +..-+. + -.
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~----~------h~-~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~ 150 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASE----G------FS-KANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDG 150 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCH----H------HH-HHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTE
T ss_pred HHHHHHHHHCCCCEEEEEEecCH----H------HH-HHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCC
Confidence 46677888899999999765553 2 11 1123455555555544432 23455553 221110 0 01
Q ss_pred ccCH---HHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc-C-CCeEEEeCCCC--hHHHHHHHHHhCCceEEE
Q 021527 153 KRGV---DNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN-K-IELVLFTTPTT--PTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 153 ~~g~---~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~-g-i~~I~lisp~t--~~eri~~i~~~a~gfiY~ 221 (311)
.+.. .+|++.+.+.|+|.+-++| +.+++..++.+.+++. . +.+.+-...+. ..... ++....|.-++
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~--l~Ai~aG~~~v 228 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNI--RVSLEKGLRVF 228 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHH--HHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHH--HHHHHhCCCEE
Confidence 2233 4566777799999999987 4456777777766653 2 33444442222 22222 22223354444
Q ss_pred -EecCCccCC-----CCCCCchHHHHHHHHhh
Q 021527 222 -VSSIGVTGA-----RASISGHVQTLLREIKE 247 (311)
Q Consensus 222 -vs~~G~TG~-----~~~~~~~~~~~l~~vk~ 247 (311)
.+..|.-|. +.+ +..+++++..+++
T Consensus 229 d~sv~GlG~cp~a~g~~G-N~~~e~lv~~l~~ 259 (295)
T 1ydn_A 229 DASVGGLGGCPFAPGAKG-NVDTVAVVEMLHE 259 (295)
T ss_dssp EEBTTCCSCBTTBTTSCC-BCBHHHHHHHHHH
T ss_pred EeccccCCCCCCCCCCcC-ChhHHHHHHHHHh
Confidence 355554221 333 2335566666654
No 444
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.71 E-value=0.51 Score=44.68 Aligned_cols=126 Identities=10% Similarity=0.053 Sum_probs=79.6
Q ss_pred HHHHHHHHHHcCCccEEEEEeC-CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHH
Q 021527 50 LAETFTRLKKQGKVALIPYITA-GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIL 128 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~-G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~ 128 (311)
..+.++.+++.=. -+-..+-+ |--+.++..++++.|++.|+++|| +|+.. .+ +
T Consensus 177 ~~e~v~avr~a~g-d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE------qP~~~---------------~~----~ 230 (384)
T 2pgw_A 177 DLEITAAVRGEIG-DARLRLDANEGWSVHDAINMCRKLEKYDIEFIE------QPTVS---------------WS----I 230 (384)
T ss_dssp HHHHHHHHHTTST-TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE------CCSCT---------------TC----H
T ss_pred HHHHHHHHHHHcC-CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe------CCCCh---------------hh----H
Confidence 4455665554311 12223321 222467889999999999999999 34321 01 3
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCC----ChhhHHHHHHHHHHcCCCeEEEeCCCCh
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV----PLEETESLQKEAMKNKIELVLFTTPTTP 204 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl----p~ee~~~~~~~~~~~gi~~I~lisp~t~ 204 (311)
+..+++++.+++||..-...+ +.++|.+.+.+-.+|.+. +|+ .+.+..++...++++|+...+-.+..++
T Consensus 231 ~~~~~l~~~~~iPI~~de~i~-----~~~~~~~~i~~~~~d~v~-ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 231 PAMAHVREKVGIPIVADQAAF-----TLYDVYEICRQRAADMIC-IGPREIGGIQPMMKAAAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHHHHCSSCEEESTTCC-----SHHHHHHHHHTTCCSEEE-ECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHHhhCCCCEEEeCCcC-----CHHHHHHHHHcCCCCEEE-EcchhhCCHHHHHHHHHHHHHCCCeEeeccCcCCH
Confidence 466778888899998865332 345555555555577764 443 2467888999999999997776556666
Q ss_pred HHH
Q 021527 205 TDR 207 (311)
Q Consensus 205 ~er 207 (311)
...
T Consensus 305 i~~ 307 (384)
T 2pgw_A 305 ITT 307 (384)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 445
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=93.67 E-value=2.5 Score=38.98 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=97.0
Q ss_pred CccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcC-----CCHHHHHHHHHHhhc
Q 021527 62 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG-----TNFNAILSMLKEVVP 136 (311)
Q Consensus 62 ~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G-----~~~~~~~~~i~~ir~ 136 (311)
...++.=+.-||-+.+...+.++.+.++|+..|.|- |+..+..-... .| +..++..+-|+.+++
T Consensus 79 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iE--------D~~~~k~cgH~---gg~~k~l~p~~e~~~rI~Aa~~ 147 (295)
T 1s2w_A 79 DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLE--------DKLFPKTNSLH---DGRAQPLADIEEFALKIKACKD 147 (295)
T ss_dssp SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEE--------CBCC-----------CTTCCBCCHHHHHHHHHHHHH
T ss_pred CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEEC--------CCCCCcccccc---CCCCCcccCHHHHHHHHHHHHH
Confidence 445887778888777889999999999999999993 22111111100 11 233343444444443
Q ss_pred c-CCCcEEEEecCcch-hccCHHHHHHH---HHHcCCcEEEecC-CC-hhhHHHHHHHHHHcCCCeEEEeC--CCChHHH
Q 021527 137 Q-MSCPIALFTYYNPI-LKRGVDNFMST---VRDIGIRGLVVPD-VP-LEETESLQKEAMKNKIELVLFTT--PTTPTDR 207 (311)
Q Consensus 137 ~-~~iPiilm~Y~n~i-~~~g~~~fi~~---~~~aGadGviipD-lp-~ee~~~~~~~~~~~gi~~I~lis--p~t~~er 207 (311)
. ...++.+.+--+.. ...|.++-+++ +.++|+|++++.- +| .++..++.+.++. .+..+...+ +.++.+
T Consensus 148 a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~-~~P~i~~~~~~~~~~~~- 225 (295)
T 1s2w_A 148 SQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN-QGPVVIVPTKYYKTPTD- 225 (295)
T ss_dssp HCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT-CSCEEECCSTTTTSCHH-
T ss_pred hcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC-CCCEEEeCCCCCCCCHH-
Confidence 2 24456666533333 34567777764 5789999998864 66 5666666655431 144443222 124433
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHc
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGW 271 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~ 271 (311)
++.+..-..+.+ |.+..+.. ...+.+..+.+++. +...+ .-.+.+.+++.++...
T Consensus 226 --eL~~lGv~~v~~----~~~~~raa-~~a~~~~~~~i~~~g~~~~~--~~~~~~~~e~~~~~~~ 281 (295)
T 1s2w_A 226 --HFRDMGVSMVIW----ANHNLRAS-VSAIQQTTKQIYDDQSLVNV--EDKIVSVKEIFRLQRD 281 (295)
T ss_dssp --HHHHHTCCEEEE----CSHHHHHH-HHHHHHHHHHHHHHSSSTTT--GGGSCCHHHHHHC---
T ss_pred --HHHHcCCcEEEE----ChHHHHHH-HHHHHHHHHHHHHcCCccch--hhcCCCHHHHHHhcCH
Confidence 444444444332 22222211 12244556666653 21111 1334455666555543
No 446
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.67 E-value=1.8 Score=40.51 Aligned_cols=152 Identities=15% Similarity=0.206 Sum_probs=82.6
Q ss_pred HHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHh----hccCCCcEEEEecCcc---hhcc
Q 021527 82 ALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV----VPQMSCPIALFTYYNP---ILKR 154 (311)
Q Consensus 82 ~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~i----r~~~~iPiilm~Y~n~---i~~~ 154 (311)
.++.+.++|+|.|.+-++-||- . ++ -..+.+.++.++.++++ ++ ....+.+- ... ..++
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~----~-~~------~~~~~s~~e~l~~~~~~v~~ak~-~G~~v~~~--~~~~~~~~~~ 166 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLH----H-LE------KQLGKTPKEFFTDVSFVIEYAIK-SGLKINVY--LEDWSNGFRN 166 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHH----H-HH------HHTCCCHHHHHHHHHHHHHHHHH-TTCEEEEE--EETHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHH----H-HH------HHhCCCHHHHHHHHHHHHHHHHH-CCCEEEEE--EEECCCCCcC
Confidence 6777788999999997666541 1 11 12345555555444443 33 33443322 111 2223
Q ss_pred CHH---HHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc--CCCeEEEeCCCChHHHHHHHHHhCCceEEEEecC
Q 021527 155 GVD---NFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN--KIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSI 225 (311)
Q Consensus 155 g~~---~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~--gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~ 225 (311)
..+ +.++.+.+.|+|.+.++| +.+++..++.+.+++. ++.+-+-...+.--.-...++....|..++-+..
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv 246 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASI 246 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEec
Confidence 333 455667889999999998 4567777777776653 3443333333332233333444456776774333
Q ss_pred CccCCCCCCCchHHHHHHHHhhc
Q 021527 226 GVTGARASISGHVQTLLREIKES 248 (311)
Q Consensus 226 G~TG~~~~~~~~~~~~l~~vk~~ 248 (311)
+.-|.+++. ..+++++.-++..
T Consensus 247 ~GlG~~aGN-~~~E~lv~~L~~~ 268 (337)
T 3ble_A 247 NGLGERAGN-TPLEALVTTIHDK 268 (337)
T ss_dssp GGCSSTTCB-CBHHHHHHHHHHH
T ss_pred ccccccccc-hhHHHHHHHHHHh
Confidence 334555443 3456666666554
No 447
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=93.63 E-value=0.78 Score=43.64 Aligned_cols=135 Identities=13% Similarity=0.087 Sum_probs=90.5
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHC-CCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc--CCC
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSC-GSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ--MSC 140 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~-GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~--~~i 140 (311)
.+-.|.+.|..+.+...+.++.+.+. |...+-+-+-.. +.++-++.++.+|+. .++
T Consensus 156 ~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------------~~~~d~~~v~avR~a~G~~~ 214 (383)
T 3toy_A 156 PIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------------DLATDEAMIKGLRALLGPDI 214 (383)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------------CHHHHHHHHHHHHHHHCTTS
T ss_pred ceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------------CHHHHHHHHHHHHHHhCCCC
Confidence 35568888888889999999999888 999988843111 123335677777775 356
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+-. |.- +..+++.++.+.+.++|+..+- .
T Consensus 215 ~l~vDa--N~~------------------------~~~~~A~~~~~~l~~~~i~~iE--e-------------------- 246 (383)
T 3toy_A 215 ALMLDF--NQS------------------------LDPAEATRRIARLADYDLTWIE--E-------------------- 246 (383)
T ss_dssp EEEEEC--TTC------------------------SCHHHHHHHHHHHGGGCCSEEE--C--------------------
T ss_pred eEEEeC--CCC------------------------CCHHHHHHHHHHHHhhCCCEEE--C--------------------
Confidence 666542 311 1235566666667777765441 1
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEh
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVG 279 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVG 279 (311)
.++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+-
T Consensus 247 ------------P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 294 (383)
T 3toy_A 247 ------------PVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPD 294 (383)
T ss_dssp ------------CSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred ------------CCCcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 1122223557888888899999999999999999998766 6877553
No 448
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.59 E-value=2.1 Score=39.04 Aligned_cols=70 Identities=23% Similarity=0.351 Sum_probs=52.2
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.||..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 67 ~gr~pvi--aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~------------------s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 67 NGRVQVI--AGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKP------------------TQEGLRKHFGKVAESIN 126 (289)
T ss_dssp TTSSEEE--EECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHCS
T ss_pred CCCCcEE--EeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhcC
Confidence 3454444 556888999999999999999999999998884331 22355667777777789
Q ss_pred CcEEEEecCcch
Q 021527 140 CPIALFTYYNPI 151 (311)
Q Consensus 140 iPiilm~Y~n~i 151 (311)
+|+++ |-+|-
T Consensus 127 lPiil--Yn~P~ 136 (289)
T 2yxg_A 127 LPIVL--YNVPS 136 (289)
T ss_dssp SCEEE--EECHH
T ss_pred CCEEE--EeCcc
Confidence 99887 55554
No 449
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=93.58 E-value=4.3 Score=37.09 Aligned_cols=176 Identities=19% Similarity=0.249 Sum_probs=109.6
Q ss_pred CCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcch
Q 021527 72 GDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPI 151 (311)
Q Consensus 72 G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i 151 (311)
.|||. ++.+...+++|||.|=+= |--|=--||. +.+..+++.+++|+-+-++.+
T Consensus 51 ~~PDp---v~aA~~ae~aGAdGITvH-----lReDrRHI~d----------------~Dv~~L~~~i~t~lNlEma~t-- 104 (278)
T 3gk0_A 51 AYPDP---VRAALAAEDAGADAITLH-----LREDRRHIVD----------------ADVRTLRPRVKTRMNLECAVT-- 104 (278)
T ss_dssp SCSCH---HHHHHHHHHTTCSEEEEE-----CCTTCSSSCH----------------HHHHHHHHHCSSCEEEEECSS--
T ss_pred CCCCH---HHHHHHHHHcCCCEEEec-----cCCCcccCCH----------------HHHHHHHHHcCCCEEeecCCC--
Confidence 47765 566667788999997773 2223222332 245555666678888877643
Q ss_pred hccCHHHHHHHHHHcCCcEE-EecCCCh--------------hhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCC
Q 021527 152 LKRGVDNFMSTVRDIGIRGL-VVPDVPL--------------EETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASE 216 (311)
Q Consensus 152 ~~~g~~~fi~~~~~aGadGv-iipDlp~--------------ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~ 216 (311)
++|++.+.+.--+-+ ++||-+- +....+.+.+++.||.+.+|+.|. .+.++...+...
T Consensus 105 -----~emi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd--~~qI~aA~~~GA 177 (278)
T 3gk0_A 105 -----PEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPD--EAQIRAAHETGA 177 (278)
T ss_dssp -----HHHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHHHTC
T ss_pred -----HHHHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCc
Confidence 789999988877655 5566431 235667888999999999999886 455655444343
Q ss_pred ceEEEEecCCccCCCCCCCchHHHHHHHHhhc------CCCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHhhc
Q 021527 217 GFVYLVSSIGVTGARASISGHVQTLLREIKES------STKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAMVK 284 (311)
Q Consensus 217 gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~------~~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSaiv~ 284 (311)
. ++.-.+|...... ......+.++++++. .++-|-+|-|++ -+++..+... +-.-+-||-+|+-
T Consensus 178 d--~IELhTG~YA~a~-~~~~~~~el~rl~~aA~~A~~lGL~VnAGHGL~-y~Nv~~ia~ip~i~ElnIGHaiIa 248 (278)
T 3gk0_A 178 P--VIELHTGRYADAH-DAAEQQREFERIATGVDAGIALGLKVNAGHGLH-YTNVQAIAALPGIAELNIGHAIVA 248 (278)
T ss_dssp S--EEEECCHHHHTCS-SHHHHHHHHHHHHHHHHHHHHTTCEEEECTTCC-TTTHHHHHTCTTEEEEEECHHHHH
T ss_pred C--EEEEecchhhccC-CchhHHHHHHHHHHHHHHHHHcCCEEecCCCCC-HHHHHHHHhCCCCeEEecCHHHHH
Confidence 4 4333323222211 112233345555442 368899999997 5888776532 2578899988765
No 450
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.57 E-value=1.7 Score=37.81 Aligned_cols=110 Identities=11% Similarity=0.138 Sum_probs=64.0
Q ss_pred HHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeC---------CCChHHHHHHHHHhCCceEEEEecCC
Q 021527 156 VDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTT---------PTTPTDRMKAIVEASEGFVYLVSSIG 226 (311)
Q Consensus 156 ~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lis---------p~t~~eri~~i~~~a~gfiY~vs~~G 226 (311)
..+.++.+.+.|++++.+. .++....++ +..++.++-++. -+.+.++++...+..-.++.+...
T Consensus 38 ~~~~a~~~~~~G~~~i~~~--~~~~i~~i~---~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~-- 110 (234)
T 1yxy_A 38 MPLMAKAAQEAGAVGIRAN--SVRDIKEIQ---AITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCT-- 110 (234)
T ss_dssp HHHHHHHHHHHTCSEEEEE--SHHHHHHHH---TTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECC--
T ss_pred HHHHHHHHHHCCCcEeecC--CHHHHHHHH---HhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEccc--
Confidence 3578888999999998874 223322222 223554432110 112356666655543344433211
Q ss_pred ccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEE
Q 021527 227 VTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGV 276 (311)
Q Consensus 227 ~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGv 276 (311)
..+. .....+.+.++++|+.. +.+ ++.++++++++..+.+.|+|.+
T Consensus 111 ~~~~--~~~~~~~~~i~~i~~~~~~~~--v~~~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 111 KRDR--HDGLDIASFIRQVKEKYPNQL--LMADISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp SSCC--TTCCCHHHHHHHHHHHCTTCE--EEEECSSHHHHHHHHHTTCSEE
T ss_pred ccCC--CCCccHHHHHHHHHHhCCCCe--EEEeCCCHHHHHHHHHcCCCEE
Confidence 1110 00124568899998876 444 5568899999999999999998
No 451
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=93.56 E-value=0.83 Score=43.00 Aligned_cols=132 Identities=10% Similarity=0.106 Sum_probs=0.0
Q ss_pred CccEEEEEeCCC-CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-C
Q 021527 62 KVALIPYITAGD-PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-S 139 (311)
Q Consensus 62 ~~~li~yi~~G~-P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~ 139 (311)
+..+..+.+.|. ++.+.+.+.++.+.+.|.+.+.+-+ +|-.| ++.++.+|+.+ +
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~---~~~~d---------------------~~~v~avr~a~~~ 189 (375)
T 1r0m_A 134 KEQVEVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKI---KPGWD---------------------VQPVRATREAFPD 189 (375)
T ss_dssp CSEEEBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEEC---BTTBS---------------------HHHHHHHHHHCTT
T ss_pred CCceeeeEEecCCCCHHHHHHHHHHHHHhcccEEEEec---ChHHH---------------------HHHHHHHHHHcCC
Q ss_pred CcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceE
Q 021527 140 CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFV 219 (311)
Q Consensus 140 iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfi 219 (311)
+++.+-... -+..++ .++.+.++++|+..|=
T Consensus 190 ~~l~vDan~--------------------------~~~~~~-~~~~~~l~~~~i~~iE---------------------- 220 (375)
T 1r0m_A 190 IRLTVDANS--------------------------AYTLAD-AGRLRQLDEYDLTYIE---------------------- 220 (375)
T ss_dssp SCEEEECTT--------------------------CCCGGG-HHHHHTTGGGCCSCEE----------------------
T ss_pred CeEEEeCCC--------------------------CCCHHH-HHHHHHHHhCCCcEEE----------------------
Q ss_pred EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 220 YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 220 Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
..++++..+.++++++.+++||+.|-.+.++++++++++.| +|.+.+
T Consensus 221 ------------qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 221 ------------QPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp ------------CCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred ------------CCCCcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
No 452
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.56 E-value=1.4 Score=40.16 Aligned_cols=70 Identities=20% Similarity=0.321 Sum_probs=52.6
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.||..+|. -.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 68 ~gr~pvia--Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~------------------~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 68 NKRIPIIA--GTGANSTREAIELTKAAKDLGADAALLVTPYYNKP------------------TQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp TTSSCEEE--ECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEE--eCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC------------------CHHHHHHHHHHHHHhcC
Confidence 35555544 56889999999999999999999999998884321 22345667778877789
Q ss_pred CcEEEEecCcch
Q 021527 140 CPIALFTYYNPI 151 (311)
Q Consensus 140 iPiilm~Y~n~i 151 (311)
+|+++ |-+|-
T Consensus 128 lPiil--Yn~P~ 137 (291)
T 3tak_A 128 LPLIL--YNVPG 137 (291)
T ss_dssp SCEEE--EECHH
T ss_pred CCEEE--Eeccc
Confidence 99987 55554
No 453
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=93.56 E-value=1.1 Score=33.88 Aligned_cols=97 Identities=13% Similarity=0.137 Sum_probs=59.9
Q ss_pred EEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC
Q 021527 171 LVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESST 250 (311)
Q Consensus 171 viipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~ 250 (311)
+++.|=.......+...++..|..... + .+..+-++.+.+.....+.+ ... ..| .+..++++++|+..+
T Consensus 5 ilivdd~~~~~~~l~~~L~~~g~~v~~-~--~~~~~al~~~~~~~~dlii~-D~~-~p~------~~g~~~~~~lr~~~~ 73 (120)
T 3f6p_A 5 ILVVDDEKPIADILEFNLRKEGYEVHC-A--HDGNEAVEMVEELQPDLILL-DIM-LPN------KDGVEVCREVRKKYD 73 (120)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEE-E--SSHHHHHHHHHTTCCSEEEE-ETT-STT------THHHHHHHHHHTTCC
T ss_pred EEEEECCHHHHHHHHHHHHhCCEEEEE-e--CCHHHHHHHHhhCCCCEEEE-eCC-CCC------CCHHHHHHHHHhcCC
Confidence 344433333455567777888876432 2 34455555554433344433 211 111 123578888988778
Q ss_pred CcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 251 KPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 251 ~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.|+++=.+-.+.+...+..+.||++++.
T Consensus 74 ~~ii~~t~~~~~~~~~~~~~~ga~~~l~ 101 (120)
T 3f6p_A 74 MPIIMLTAKDSEIDKVIGLEIGADDYVT 101 (120)
T ss_dssp SCEEEEEESSCHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHhCCcceeEc
Confidence 8988877777888888999999999965
No 454
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=93.55 E-value=0.21 Score=43.41 Aligned_cols=90 Identities=18% Similarity=0.291 Sum_probs=52.5
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.++...+.|+|+|-+|.-|..+...|. ... .++.++++++..++|++..|=.| .+-
T Consensus 120 ~~~~~~a~~~gaD~i~~~~~f~~~~~~g~-----------~~~----~~~~l~~~~~~~~~pvia~GGI~-------~~n 177 (221)
T 1yad_A 120 LEEAVQAEKEDADYVLFGHVFETDCKKGL-----------EGR----GVSLLSDIKQRISIPVIAIGGMT-------PDR 177 (221)
T ss_dssp HHHHHHHHHTTCSEEEEECCC---------------------C----HHHHHHHHHHHCCSCEEEESSCC-------GGG
T ss_pred HHHHHHHHhCCCCEEEECCccccCCCCCC-----------CCC----CHHHHHHHHHhCCCCEEEECCCC-------HHH
Confidence 35566777899999999855533222221 011 13567777766789999987444 234
Q ss_pred HHHHHHcCCcEEEecCC------ChhhHHHHHHHHHHc
Q 021527 160 MSTVRDIGIRGLVVPDV------PLEETESLQKEAMKN 191 (311)
Q Consensus 160 i~~~~~aGadGviipDl------p~ee~~~~~~~~~~~ 191 (311)
+..+.++|++|+.+... |.+...++++.+++.
T Consensus 178 v~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 178 LRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEM 215 (221)
T ss_dssp HHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHHh
Confidence 55677799999988421 223345555555543
No 455
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=93.53 E-value=0.54 Score=44.16 Aligned_cols=138 Identities=12% Similarity=0.089 Sum_probs=92.0
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
.+-.|.+.|..+.+...+.++.+.+.|.+.+-+-+- .+.++-++.++.+|+.+ +++
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G----------------------~~~~~d~~~v~avR~~~g~~~~ 186 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLC----------------------GDEEQDFERLRRLHETLAGRAV 186 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECC----------------------SCHHHHHHHHHHHHHHHTTSSE
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeC----------------------CCHHHHHHHHHHHHHHhCCCCE
Confidence 344577777777889999999999999999888532 12233456777777753 566
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+-. |.- +..+++.++.+.++++|+..+- .|
T Consensus 187 l~vDa--n~~------------------------~~~~~a~~~~~~l~~~~i~~iE--qP-------------------- 218 (356)
T 3ro6_B 187 VRVDP--NQS------------------------YDRDGLLRLDRLVQELGIEFIE--QP-------------------- 218 (356)
T ss_dssp EEEEC--TTC------------------------CCHHHHHHHHHHHHHTTCCCEE--CC--------------------
T ss_pred EEEeC--CCC------------------------CCHHHHHHHHHHHHhcCCCEEE--CC--------------------
Confidence 66642 311 1234566666777777766551 11
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC--CcEEEEhhHhh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG--ADGVIVGSAMV 283 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G--ADGvIVGSaiv 283 (311)
++++..+.++++++.+++||+.|--+.+++++.++++.| +|.+.+--.-.
T Consensus 219 ------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~ 270 (356)
T 3ro6_B 219 ------------FPAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKC 270 (356)
T ss_dssp ------------SCTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHH
T ss_pred ------------CCCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEccccc
Confidence 111123457777777789999999999999999999854 89998854433
No 456
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=93.53 E-value=3.8 Score=36.34 Aligned_cols=174 Identities=15% Similarity=0.153 Sum_probs=88.4
Q ss_pred eCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcEEEEecC
Q 021527 70 TAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPIALFTYY 148 (311)
Q Consensus 70 ~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPiilm~Y~ 148 (311)
..|.++.+...+.++.+.+.|+|++|+=+=|-+.. +.+++.+.++.+|+.. ++|+++ ++-
T Consensus 10 i~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~------------------~~~~v~~~~~~lr~~~~~~PiI~-T~R 70 (238)
T 1sfl_A 10 ITPQLSIEETLIQKINHRIDAIDVLELRIDQFENV------------------TVDQVAEMITKLKVMQDSFKLLV-TYR 70 (238)
T ss_dssp ECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTC------------------CHHHHHHHHHHHC---CCSEEEE-ECC
T ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccC------------------CHHHHHHHHHHHHHhccCCCEEE-Eee
Confidence 44546778888888888899999999965442211 2234556788888776 789866 432
Q ss_pred c----chhccCHHHHH---HHHHHc-CCcEEEecCC----ChhhHHHHHHHHHHcCCCeEEEe-----CCCChHHHHHHH
Q 021527 149 N----PILKRGVDNFM---STVRDI-GIRGLVVPDV----PLEETESLQKEAMKNKIELVLFT-----TPTTPTDRMKAI 211 (311)
Q Consensus 149 n----~i~~~g~~~fi---~~~~~a-GadGviipDl----p~ee~~~~~~~~~~~gi~~I~li-----sp~t~~eri~~i 211 (311)
. ..+....+.++ +.+.+. ++|-+ -.++ +.+...++.+.+++.|.++|.-. +|. .++....+
T Consensus 71 ~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~i-DvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~-~~el~~~~ 148 (238)
T 1sfl_A 71 TKLQGGYGQFTNDSYLNLISDLANINGIDMI-DIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPP-LDELQFIF 148 (238)
T ss_dssp BGGGTSCBCCCHHHHHHHHHHGGGCTTCCEE-EEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC-HHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHhCCCCEE-EEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcC-HHHHHHHH
Confidence 1 11222233343 444544 46654 3333 33335567777788888766432 232 13333333
Q ss_pred HHh-CCc-eEEEEecCCccCCCCCCCchHHHHHH---HHhhcCCCcEEEeeCCCCHHHHHHHHHc
Q 021527 212 VEA-SEG-FVYLVSSIGVTGARASISGHVQTLLR---EIKESSTKPVAVGFGISKPEHVQQVAGW 271 (311)
Q Consensus 212 ~~~-a~g-fiY~vs~~G~TG~~~~~~~~~~~~l~---~vk~~~~~Pv~vGfGIst~e~v~~v~~~ 271 (311)
.+. ..| -++-+..+.. ...++..+++ ++++..+.|+ +++.-...-.+.+++..
T Consensus 149 ~~~~~~gaDivKia~~a~------~~~D~l~ll~~~~~~~~~~~~P~-I~~~MG~~G~~SRi~~~ 206 (238)
T 1sfl_A 149 FKMQKFNPEYVKLAVMPH------NKNDVLNLLQAMSTFSDTMDCKV-VGISMSKLGLISRTAQG 206 (238)
T ss_dssp HHHHTTCCSEEEEEECCS------SHHHHHHHHHHHHHHHHHCSSEE-EEEECTGGGHHHHHTGG
T ss_pred HHHHHcCCCEEEEEecCC------CHHHHHHHHHHHHHHhhcCCCCE-EEEECCCCchHHHHHHH
Confidence 322 345 3444443321 1233444443 3433467896 44444333457777654
No 457
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=93.49 E-value=0.97 Score=42.95 Aligned_cols=135 Identities=16% Similarity=0.060 Sum_probs=0.0
Q ss_pred CccEEEEEe-C--CCC-------ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHc------CC---
Q 021527 62 KVALIPYIT-A--GDP-------DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAR------GT--- 122 (311)
Q Consensus 62 ~~~li~yi~-~--G~P-------~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~------G~--- 122 (311)
+..+=.|-+ . |.. +.+.+.+.++.+.+.|.+.+++- . |.
T Consensus 123 ~~~vp~y~~~i~~g~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik----------------------~~~~~~~G~~~~ 180 (403)
T 2ox4_A 123 REDLRVYASQLQFGWGKERKSKGRKEEYAEEALKAVAEGYDAVKVD----------------------VLAHDRNGSREG 180 (403)
T ss_dssp SSSEEEEEECGGGCSSSSCCCCCSHHHHHHHHHHHHHTTCSEEEEC----------------------CSSSCTTSCCTT
T ss_pred CCceeeeEeeccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEe----------------------ccccCCcccccc
Q ss_pred ----------CHHHHHHHHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHH
Q 021527 123 ----------NFNAILSMLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK 190 (311)
Q Consensus 123 ----------~~~~~~~~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~ 190 (311)
+++...+.++.+|+.+ ++++.+ .++ .-+..+++.++.+.+.+
T Consensus 181 s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~v----------------------Dan----~~~~~~~ai~~~~~l~~ 234 (403)
T 2ox4_A 181 VFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIV----------------------ENH----GHTDLVSAIQFAKAIEE 234 (403)
T ss_dssp CCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEE----------------------ECT----TCSCHHHHHHHHHHHGG
T ss_pred CcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEE----------------------ECC----CCCCHHHHHHHHHHHHh
Q ss_pred cCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHH
Q 021527 191 NKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAG 270 (311)
Q Consensus 191 ~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~ 270 (311)
+|+..+- ..++++..+.++++++.+++||+.|-.+.++++++++++
T Consensus 235 ~~i~~iE----------------------------------~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 280 (403)
T 2ox4_A 235 FNIFFYE----------------------------------EINTPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLE 280 (403)
T ss_dssp GCEEEEE----------------------------------CCSCTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHH
T ss_pred hCCCEEe----------------------------------CCCChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHH
Q ss_pred cC-CcEEEE
Q 021527 271 WG-ADGVIV 278 (311)
Q Consensus 271 ~G-ADGvIV 278 (311)
.| +|.+.+
T Consensus 281 ~~~~d~v~i 289 (403)
T 2ox4_A 281 DRSIDVIQP 289 (403)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
No 458
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.49 E-value=2.9 Score=38.15 Aligned_cols=154 Identities=9% Similarity=0.069 Sum_probs=82.1
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHH----hhccCCCcEE--EE-ecCcch-
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKE----VVPQMSCPIA--LF-TYYNPI- 151 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~----ir~~~~iPii--lm-~Y~n~i- 151 (311)
.+.++.+.++|+|.+.+-.+-||. . ++ + ..+.+.++.++.+.+ .++ ...++. ++ ++..+.
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~----~-~~----~--~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~~~~~~~~ 150 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASEL----F-TK----K--NINCSIEESFQRFDAILKAAQS-ANISVRGYVSCALGCPYE 150 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHH----H-HH----H--HHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETTTCBTTT
T ss_pred HHhHHHHHHCCCCEEEEEecCCHH----H-HH----H--HhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcC
Confidence 456788888999999997665542 1 11 1 123455555544444 343 344443 32 121111
Q ss_pred hccCH---HHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc--CCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 152 LKRGV---DNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN--KIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 152 ~~~g~---~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~--gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
.++.. .++++.+.+.|++.+.++| +.+++..++.+.+++. ++.+-+-...+.--.-...++....|..++-
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVD 230 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 11223 3466677899999999987 4567777777776653 2333344444433222333444456776663
Q ss_pred -ecCCccCC------CCCCCchHHHHHHHHhh
Q 021527 223 -SSIGVTGA------RASISGHVQTLLREIKE 247 (311)
Q Consensus 223 -s~~G~TG~------~~~~~~~~~~~l~~vk~ 247 (311)
+..| -|. +.+ +..+++++.-++.
T Consensus 231 ~tv~G-lG~cp~a~g~aG-N~~~E~lv~~l~~ 260 (298)
T 2cw6_A 231 SSVAG-LGGCPYAQGASG-NLATEDLVYMLEG 260 (298)
T ss_dssp EBTTS-CCCCTTSCSSCC-BCBHHHHHHHHHH
T ss_pred eeccc-ccCCCCCCCCcC-ChhHHHHHHHHHh
Confidence 4444 343 333 2335555655554
No 459
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.49 E-value=0.62 Score=43.50 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=66.4
Q ss_pred HHHHHHHHHHcCCccEEEEEeCCC-----CChhhHHHHHHHHHHCCCCEEEEcCCCCCC--CCChHHHHHHHHHHHHcCC
Q 021527 50 LAETFTRLKKQGKVALIPYITAGD-----PDLSTTAEALKLLDSCGSDIIELGVPYSDP--LADGPVIQAAATRSLARGT 122 (311)
Q Consensus 50 i~~~f~~~~~~~~~~li~yi~~G~-----P~~~~~~e~~~~L~~~GaD~IElG~PfsDP--~aDGp~Iq~a~~~Al~~G~ 122 (311)
+.+.++.+++.-...+..=+.+.+ -+.+.+.++++.|++.|+|.|++.....++ ...+| +.
T Consensus 197 ~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~------------~~ 264 (338)
T 1z41_A 197 LREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP------------GY 264 (338)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT------------TT
T ss_pred HHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc------------cc
Confidence 456666666553445666666643 245789999999999999999996543221 01111 12
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcC-CcEEEec
Q 021527 123 NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVVP 174 (311)
Q Consensus 123 ~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aG-adGviip 174 (311)
+ ++.++++|+.+++||+..+-.+ . .+.++.+.+.| +|+|.+.
T Consensus 265 ~----~~~~~~ir~~~~iPVi~~Ggi~-----s-~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 265 Q----VSFAEKIREQADMATGAVGMIT-----D-GSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp T----HHHHHHHHHHHCCEEEECSSCC-----S-HHHHHHHHHTTSCSEEEEC
T ss_pred h----HHHHHHHHHHCCCCEEEECCCC-----C-HHHHHHHHHcCCceEEeec
Confidence 2 3577788888899999876432 1 23455566666 9999883
No 460
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=93.47 E-value=0.19 Score=40.99 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=28.3
Q ss_pred HHHHHHHHhhc-C-CCcEEEeeCC-CCHHH----HHHHHHcCCcEEE-Ehh
Q 021527 238 VQTLLREIKES-S-TKPVAVGFGI-SKPEH----VQQVAGWGADGVI-VGS 280 (311)
Q Consensus 238 ~~~~l~~vk~~-~-~~Pv~vGfGI-st~e~----v~~v~~~GADGvI-VGS 280 (311)
+.++++.+|+. . +++|++|+.. ..+++ ...+.+.|+|+++ -||
T Consensus 71 ~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~ 121 (137)
T 1ccw_A 71 CKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGT 121 (137)
T ss_dssp HTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCC
Confidence 44567777664 3 6899999874 22222 4558889999996 344
No 461
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=93.47 E-value=1.8 Score=41.04 Aligned_cols=137 Identities=15% Similarity=0.257 Sum_probs=88.7
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCc
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCP 141 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iP 141 (311)
..+-.|.+.|.++.+...+.++.+.+.|...+-+-+-.. ..++-++.++.+|+.+ +++
T Consensus 136 ~~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------------~~~~d~~~v~avR~a~~~~~ 194 (385)
T 3i6e_A 136 DTIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------------DHAFDIMRLELIARDFPEFR 194 (385)
T ss_dssp SEEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------------CHHHHHHHHHHHHHHCTTSE
T ss_pred CceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------------CHHHHHHHHHHHHHhCCCCe
Confidence 345557777778888888888888888999988853221 1223345677777664 455
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+- .|.- +..+++.++.+.++++|+..+= .|
T Consensus 195 l~vD--an~~------------------------~~~~~A~~~~~~L~~~~i~~iE--qP-------------------- 226 (385)
T 3i6e_A 195 VRVD--YNQG------------------------LEIDEAVPRVLDVAQFQPDFIE--QP-------------------- 226 (385)
T ss_dssp EEEE--CTTC------------------------CCGGGHHHHHHHHHTTCCSCEE--CC--------------------
T ss_pred EEEE--CCCC------------------------CCHHHHHHHHHHHHhcCCCEEE--CC--------------------
Confidence 5553 2311 1235566666677777765441 11
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
++++..+.++++++.+++||+.|--+.+++++.++++.| +|.+.+--
T Consensus 227 ------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 274 (385)
T 3i6e_A 227 ------------VRAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKI 274 (385)
T ss_dssp ------------SCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred ------------CCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 122223567888888889999999999999999888655 68887743
No 462
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=93.45 E-value=0.063 Score=47.54 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=37.2
Q ss_pred HHHHHHHHhhcCCCcEEEeeCCCC------HHHHHHHHHcCCcEEEEhh
Q 021527 238 VQTLLREIKESSTKPVAVGFGISK------PEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 238 ~~~~l~~vk~~~~~Pv~vGfGIst------~e~v~~v~~~GADGvIVGS 280 (311)
..+.++++|+.+++||.++.+++. .+.++.+.+.|||++++++
T Consensus 68 ~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 68 AFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 457899999999999988877764 4899999999999999996
No 463
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=93.45 E-value=0.3 Score=43.23 Aligned_cols=38 Identities=18% Similarity=0.521 Sum_probs=30.8
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.++++++++. +++|. -+.++++++++++.++|+||++.
T Consensus 197 ~~~v~~~~~~-G~~v~-~wTvn~~~~~~~l~~~GvdgI~T 234 (247)
T 2otd_A 197 KARVMQLKDA-GLRIL-VYTVNKPQHAAELLRWGVDCICT 234 (247)
T ss_dssp HHHHHHHHHT-TCEEE-EECCCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHC-CCEEE-EEccCCHHHHHHHHHcCCCEEEe
Confidence 3567777664 67774 57799999999999999999975
No 464
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=93.43 E-value=0.52 Score=44.41 Aligned_cols=92 Identities=20% Similarity=0.139 Sum_probs=64.2
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.++..+.++.|++.|+++||= |+... + ++..+++++++++||..-....
T Consensus 203 ~~~~a~~~~~~l~~~~i~~iEq------P~~~~---------------d----~~~~~~l~~~~~iPI~~dE~~~----- 252 (371)
T 2ovl_A 203 TVDGAIRAARALAPFDLHWIEE------PTIPD---------------D----LVGNARIVRESGHTIAGGENLH----- 252 (371)
T ss_dssp CHHHHHHHHHHHGGGCCSEEEC------CSCTT---------------C----HHHHHHHHHHHCSCEEECTTCC-----
T ss_pred CHHHHHHHHHHHHhcCCCEEEC------CCCcc---------------c----HHHHHHHHhhCCCCEEeCCCCC-----
Confidence 4678889999999999999983 32210 1 2456677777889998865332
Q ss_pred CHHHHHHHHHHcCCcEEEecCCC----hhhHHHHHHHHHHcCCCeEE
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVP----LEETESLQKEAMKNKIELVL 197 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp----~ee~~~~~~~~~~~gi~~I~ 197 (311)
+.++|.+.+.+-.+|.+ .+|+. +.+..++...++++|+...+
T Consensus 253 ~~~~~~~~i~~~~~d~v-~ik~~~~GGi~~~~~i~~~A~~~gi~~~~ 298 (371)
T 2ovl_A 253 TLYDFHNAVRAGSLTLP-EPDVSNIGGYTTFRKVAALAEANNMLLTS 298 (371)
T ss_dssp SHHHHHHHHHHTCCSEE-CCCTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHcCCCCEE-eeCccccCCHHHHHHHHHHHHHcCCeEcc
Confidence 34556655555557775 56543 56788899999999998665
No 465
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=93.41 E-value=0.96 Score=42.40 Aligned_cols=129 Identities=15% Similarity=0.168 Sum_probs=79.9
Q ss_pred EEEEEeCCC-CChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC-CCcE
Q 021527 65 LIPYITAGD-PDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM-SCPI 142 (311)
Q Consensus 65 li~yi~~G~-P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~-~iPi 142 (311)
+..+.+.|. .+.+.+.+.++.+.+.|.+.+.+-+ +|-.| ++.++.+|+.+ ++++
T Consensus 130 ~~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~---~~~~d---------------------~~~v~avr~a~~~~~l 185 (369)
T 2zc8_A 130 VEVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKI---KPGWD---------------------YEVLKAVREAFPEATL 185 (369)
T ss_dssp EEBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEEC---BTTBS---------------------HHHHHHHHHHCTTSCE
T ss_pred eeceEEecCCCCHHHHHHHHHHHHHhhhheeeeec---ChhHH---------------------HHHHHHHHHHcCCCeE
Confidence 444444454 5678888888888899999999853 22111 23455555543 4565
Q ss_pred EEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEE
Q 021527 143 ALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLV 222 (311)
Q Consensus 143 ilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~v 222 (311)
.+-. |.- +..++ .++.+.++++|+..+= .|
T Consensus 186 ~vDa--n~~------------------------~~~~~-~~~~~~l~~~~i~~iE--qP--------------------- 215 (369)
T 2zc8_A 186 TADA--NSA------------------------YSLAN-LAQLKRLDELRLDYIE--QP--------------------- 215 (369)
T ss_dssp EEEC--TTC------------------------CCGGG-HHHHHGGGGGCCSCEE--CC---------------------
T ss_pred EEec--CCC------------------------CCHHH-HHHHHHHHhCCCcEEE--CC---------------------
Confidence 5532 211 12244 4555555666655432 11
Q ss_pred ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 223 SSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 223 s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
++++..+.++++++.+++||+.|--+.++++++++++.| +|.+.+
T Consensus 216 -----------~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 216 -----------LAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp -----------SCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred -----------CCcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 111112457777777889999999999999999998766 788877
No 466
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=93.36 E-value=1.8 Score=41.12 Aligned_cols=139 Identities=14% Similarity=0.154 Sum_probs=88.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CC
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SC 140 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~i 140 (311)
..+-.|.+.|.-+.+...+.++.+.+.|...+-+-+- .+.++-++.++.+|+.+ ++
T Consensus 130 ~~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g----------------------~~~~~d~~~v~avR~a~g~~~ 187 (379)
T 3r0u_A 130 NSIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTG----------------------ADFNRDIQLLKALDNEFSKNI 187 (379)
T ss_dssp CEEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECS----------------------SCHHHHHHHHHHHHHHCCTTS
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecC----------------------CCHHHHHHHHHHHHHhcCCCC
Confidence 3455677777777788888899888899999888431 12233456777888764 45
Q ss_pred cEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEE
Q 021527 141 PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVY 220 (311)
Q Consensus 141 Piilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY 220 (311)
++.+.. |.- +..+++.++.+.+++++..+-++=.|
T Consensus 188 ~L~vDa--N~~------------------------w~~~~A~~~~~~l~~~~~~l~~iEeP------------------- 222 (379)
T 3r0u_A 188 KFRFDA--NQG------------------------WNLAQTKQFIEEINKYSLNVEIIEQP------------------- 222 (379)
T ss_dssp EEEEEC--TTC------------------------CCHHHHHHHHHHHHTSCCCEEEEECC-------------------
T ss_pred eEEEeC--CCC------------------------cCHHHHHHHHHHHhhcCCCcEEEECC-------------------
Confidence 665532 311 12345555555555522221111111
Q ss_pred EEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhhH
Q 021527 221 LVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGSA 281 (311)
Q Consensus 221 ~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGSa 281 (311)
++++..+.++++++.+++||+.|--+.++.++.++++.| +|.+.+--.
T Consensus 223 -------------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 271 (379)
T 3r0u_A 223 -------------VKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLA 271 (379)
T ss_dssp -------------SCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHH
T ss_pred -------------CCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECcc
Confidence 122223567788888899999999999999999998866 688877433
No 467
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=93.33 E-value=0.39 Score=42.78 Aligned_cols=38 Identities=18% Similarity=0.391 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.++++++++. +++| .-+.++++++++++.++|+||++.
T Consensus 201 ~~~v~~~~~~-G~~v-~~wTvn~~~~~~~l~~~GvdgIiT 238 (252)
T 2pz0_A 201 PELVEGCKKN-GVKL-FPWTVDRKEDMERMIKAGVDGIIT 238 (252)
T ss_dssp HHHHHHHHHT-TCEE-CCBCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHC-CCEE-EEECCCCHHHHHHHHHcCCCEEEc
Confidence 4677777664 6777 446799999999999999999975
No 468
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.33 E-value=1.6 Score=40.45 Aligned_cols=70 Identities=20% Similarity=0.244 Sum_probs=52.8
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.+|..+|. -.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 91 ~grvpVia--Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~------------------s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 91 AHRVPTIV--SVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKL------------------NEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp TTSSCBEE--ECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCC------------------CHHHHHHHHHHHHHHCS
T ss_pred CCCCcEEE--ecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhCC
Confidence 35555544 56889999999999999999999999998884431 22355667778877788
Q ss_pred CcEEEEecCcch
Q 021527 140 CPIALFTYYNPI 151 (311)
Q Consensus 140 iPiilm~Y~n~i 151 (311)
+||++ |-+|-
T Consensus 151 lPiil--Yn~P~ 160 (315)
T 3na8_A 151 VPVML--YNNPG 160 (315)
T ss_dssp SCEEE--EECHH
T ss_pred CcEEE--EeCcc
Confidence 99987 55554
No 469
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=93.28 E-value=1.1 Score=40.93 Aligned_cols=181 Identities=16% Similarity=0.156 Sum_probs=96.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcC---------CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEe
Q 021527 76 LSTTAEALKLLDSCGSDIIELGV---------PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFT 146 (311)
Q Consensus 76 ~~~~~e~~~~L~~~GaD~IElG~---------PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~ 146 (311)
.+...+.++.+.++|+|.. +++ |-+.|+ . -.|..+++-++++++++++..+|++--.
T Consensus 28 ~e~a~~~a~~lk~~ga~~~-~~~v~k~~f~k~prts~~------------~-~~g~~l~~gl~~l~~~~~~~Gl~~~te~ 93 (280)
T 2qkf_A 28 LDSTLQTCAHYVEVTRKLG-IPYIFKASFDKANRSSIH------------S-YRGVGLEEGLKIFEKVKAEFGIPVITDV 93 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CCEEEEEESCCSSCSSSS------------S-CCCSCHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred HHHHHHHHHHHHHhhhhcc-eeEEEeeeeecCCCCChH------------H-hhccchHHHHHHHHHHHHHcCCcEEEec
Confidence 4789999999999887754 331 222222 0 1234456778899999888999987732
Q ss_pred cCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCC--hHHH---HHHHHHhCCceEEE
Q 021527 147 YYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTT--PTDR---MKAIVEASEGFVYL 221 (311)
Q Consensus 147 Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t--~~er---i~~i~~~a~gfiY~ 221 (311)
+++. -++.+.+. +|.+-++-.-..... +..++.+.| .+|.+-+.+. ..+. .+.+......-+.+
T Consensus 94 -~d~~-------~~~~l~~~-~d~~kIga~~~~n~~-ll~~~a~~~-kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 94 -HEPH-------QCQPVAEV-CDVIQLPAFLARQTD-LVVAMAKTG-NVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp -CSGG-------GHHHHHHH-CSEEEECGGGTTBHH-HHHHHHHTC-CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEE
T ss_pred -CCHH-------HHHHHHhh-CCEEEECcccccCHH-HHHHHHcCC-CcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 2322 22333445 788888743223333 444555667 4566666553 3332 22222222222222
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEe---------------eCCC--CHHHHHHHHHcCCcEEEEhhHhh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESS-TKPVAVG---------------FGIS--KPEHVQQVAGWGADGVIVGSAMV 283 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vG---------------fGIs--t~e~v~~v~~~GADGvIVGSaiv 283 (311)
.-..+..+.. ....++ ..+..+|+.+ +.||++. .|-+ -+.-..+....||||++|=+-+.
T Consensus 163 ~~rg~~~~~~-~~~~dl-~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 163 CERGSSFGYD-NLVVDM-LGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp EECCEECSTT-CEECCT-THHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred EECCCCCCCC-ccccCH-HHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 2111111111 100122 3467788877 8998873 2300 02345566789999999988776
No 470
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=93.28 E-value=0.38 Score=44.32 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=38.7
Q ss_pred CCceEEEEecCCccCCCCCCCchHHHHHHHHhh--------cCCCcEEEeeCCCCHHHHHHHHHcCCc
Q 021527 215 SEGFVYLVSSIGVTGARASISGHVQTLLREIKE--------SSTKPVAVGFGISKPEHVQQVAGWGAD 274 (311)
Q Consensus 215 a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~--------~~~~Pv~vGfGIst~e~v~~v~~~GAD 274 (311)
..|..|+=+.+|.++.. ...+++.-+.+.+|+ ..+++|-+.+||+|.+++.+++++|++
T Consensus 183 eaGADfVKTSTGf~~~g-AT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 183 NGNADFIKTSTGKVQIN-ATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp TTTCSEEECCCSCSSCC-CCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HhCCCEEEeCCCCCCCC-CCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 45777777766654211 122334333333432 236899999999999999999999876
No 471
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.24 E-value=0.49 Score=43.87 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=57.2
Q ss_pred ccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCC--CC---------CC--CChHHHHHHHHHHHHcCCCHHHHHH
Q 021527 63 VALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPY--SD---------PL--ADGPVIQAAATRSLARGTNFNAILS 129 (311)
Q Consensus 63 ~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~Pf--sD---------P~--aDGp~Iq~a~~~Al~~G~~~~~~~~ 129 (311)
..++.=+.++ -+.+++.++++.++++|+|.|.+..-. .+ +. .+|+.+.. ..++
T Consensus 212 ~Pv~vKi~~~-~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~-------------~~~~ 277 (336)
T 1f76_A 212 VPIAVKIAPD-LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL-------------KSTE 277 (336)
T ss_dssp CCEEEECCSC-CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHH-------------HHHH
T ss_pred CceEEEecCC-CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHH-------------HHHH
Confidence 4455545443 445678999999999999999995321 11 00 12332211 1246
Q ss_pred HHHHhhccC--CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 130 MLKEVVPQM--SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 130 ~i~~ir~~~--~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
.++++++.+ ++||+.-|-.. . -+.+.++.++|+|+|-+.
T Consensus 278 ~i~~i~~~~~~~ipVi~~GGI~-----~-~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 278 IIRRLSLELNGRLPIIGVGGID-----S-VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHTTSSCEEEESSCC-----S-HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHhCCCCCEEEECCCC-----C-HHHHHHHHHCCCCEEEee
Confidence 777888776 89999876322 1 234555566899999875
No 472
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=93.22 E-value=0.71 Score=42.87 Aligned_cols=195 Identities=17% Similarity=0.265 Sum_probs=100.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEcCCCCC---CC--CChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc----cC--CCcEEEE
Q 021527 77 STTAEALKLLDSCGSDIIELGVPYSD---PL--ADGPVIQAAATRSLARGTNFNAILSMLKEVVP----QM--SCPIALF 145 (311)
Q Consensus 77 ~~~~e~~~~L~~~GaD~IElG~PfsD---P~--aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~----~~--~iPiilm 145 (311)
+-+++.++...+.|+++||+++-|+. |+ .||..-. +.|--..+.++.++|+.++++.. +. ++=++++
T Consensus 36 vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcd--c~r~C~~~~~~~~~l~~lr~~ttpg~~k~~~~l~lv~~ 113 (302)
T 3rlg_A 36 VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCD--CGRNCKKYENFNDFLKGLRSATTPGNSKYQEKLVLVVF 113 (302)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCC--TTCCSCCCCBHHHHHHHHHHHHSTTSTTCCTTCCEEEE
T ss_pred hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcc--hhccCCCCccHHHHHHHHHHhcCCCCCccccceEEEEE
Confidence 55678888889999999999998852 22 2441100 11111234577788888887753 11 2223333
Q ss_pred -e-----cCcchhccCHHHHHHH----HHH---cCCcEEEe---cCCCh-hhHHHHHHHHHHcCC----CeEEE-eCCCC
Q 021527 146 -T-----YYNPILKRGVDNFMST----VRD---IGIRGLVV---PDVPL-EETESLQKEAMKNKI----ELVLF-TTPTT 203 (311)
Q Consensus 146 -~-----Y~n~i~~~g~~~fi~~----~~~---aGadGvii---pDlp~-ee~~~~~~~~~~~gi----~~I~l-isp~t 203 (311)
. +-|..+..|. ++.+. +-+ .|..+=|+ |++.. +-..-+.+.++..|. +.+.+ .+-+.
T Consensus 114 DlK~~~l~~~~~~~aG~-~la~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n~ 192 (302)
T 3rlg_A 114 DLKTGSLYDNQANDAGK-KLAKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGND 192 (302)
T ss_dssp EECGGGSCGGGHHHHHH-HHHHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSCC
T ss_pred EcCCCCCCHHHHHHhHH-HHHHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCCC
Confidence 1 2233333333 23333 333 34444344 33321 123345566667773 44433 33333
Q ss_pred hHHHHHHHHHhC--CceEEEEecCCccCCCCCCCchHHHHHHHHhhcCC---CcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 204 PTDRMKAIVEAS--EGFVYLVSSIGVTGARASISGHVQTLLREIKESST---KPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 204 ~~eri~~i~~~a--~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~---~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+.+.+.+..+.. .+-+.+- .|+|....-....+.+.++. |...+ ++| .-+-|++++++++++++|+||+|-
T Consensus 193 dl~~i~~~~~~~Gi~~h~wqs--DGItnC~~r~~~rl~~ai~~-RDs~~~~i~~V-~vWTVNd~~~m~~l~~~GVDGIIT 268 (302)
T 3rlg_A 193 DIGDVGKAYKKAGITGHIWQS--DGITNCLPRGLSRVNAAVAN-RDSANGFINKV-YYWTVDKRSTTRDALDAGVDGIMT 268 (302)
T ss_dssp CHHHHHHHHHHTTCCSCBEEE--EECCTTSCCCSHHHHHHHHH-HTSTTCCCSEE-EEECCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHhcCCcCcEEec--CCcccceeccHHHHHHHHHh-ccCCCCceEEE-EEEeCCCHHHHHHHHHcCCCEEEC
Confidence 334444443332 2333332 35665541111223333332 22222 234 667899999999999999999985
No 473
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.17 E-value=2.5 Score=39.02 Aligned_cols=121 Identities=10% Similarity=0.139 Sum_probs=71.6
Q ss_pred CccEEEEEeCCCC-ChhhHHHHHHHHHHCCCCEEEEcCCCCCCC---CChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc
Q 021527 62 KVALIPYITAGDP-DLSTTAEALKLLDSCGSDIIELGVPYSDPL---ADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ 137 (311)
Q Consensus 62 ~~~li~yi~~G~P-~~~~~~e~~~~L~~~GaD~IElG~PfsDP~---aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~ 137 (311)
...++.=+.-||- +.+...+.++.+.++|+++|.|--=-.-|. ..|..+ +..++..+-|+..++.
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L-----------~p~~~~~~~I~Aa~~a 146 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAI-----------VSKEEMVDRIRAAVDA 146 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCB-----------CCHHHHHHHHHHHHHH
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCcc-----------CCHHHHHHHHHHHHHh
Confidence 4457777777886 778899999999999999999830000000 001000 1222223334444332
Q ss_pred -CCCcEEEEecCcchhccCHHHHHHH---HHHcCCcEEEecCCC-hhhHHHHHHHHHHcCCCeE
Q 021527 138 -MSCPIALFTYYNPILKRGVDNFMST---VRDIGIRGLVVPDVP-LEETESLQKEAMKNKIELV 196 (311)
Q Consensus 138 -~~iPiilm~Y~n~i~~~g~~~fi~~---~~~aGadGviipDlp-~ee~~~~~~~~~~~gi~~I 196 (311)
...++.+.+--+.....|+++-+++ +.++|+|++.++-+| .++..++.+. ..+..+
T Consensus 147 ~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~---~~iP~~ 207 (295)
T 1xg4_A 147 KTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADA---VQVPIL 207 (295)
T ss_dssp CSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH---HCSCBE
T ss_pred ccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH---cCCCEE
Confidence 3556667654443344567776664 578999999998887 3555555544 455544
No 474
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=93.17 E-value=1.3 Score=42.06 Aligned_cols=137 Identities=11% Similarity=0.054 Sum_probs=0.0
Q ss_pred CccEEEEEe-C--CCC---------ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHc------CC-
Q 021527 62 KVALIPYIT-A--GDP---------DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAR------GT- 122 (311)
Q Consensus 62 ~~~li~yi~-~--G~P---------~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~------G~- 122 (311)
+..+-.|-+ . |+. +.+.+.+.++.+.+.|.+.+++- . |.
T Consensus 127 ~~~vp~y~~~i~~g~~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik----------------------~~~~~~~G~~ 184 (407)
T 2o56_A 127 REKIRTYASQLQFGWGDGSDKDMLTEPEQYAQAALTAVSEGYDAIKVD----------------------TVAMDRHGNW 184 (407)
T ss_dssp CSSEEEEEECGGGCCSTTCTTCCCCSHHHHHHHHHHHHHTTCSEEEEC----------------------CSSBCTTSCB
T ss_pred CCeeeeeeeeccCCccccccccccCCHHHHHHHHHHHHHcCCCEEEEc----------------------ccccCCcCcc
Q ss_pred ------------CHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHH
Q 021527 123 ------------NFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK 190 (311)
Q Consensus 123 ------------~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~ 190 (311)
+++...+.++.+|+.+.--+-++.-.|.-+ ..+++.++.+.+.+
T Consensus 185 ~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~------------------------~~~~a~~~~~~l~~ 240 (407)
T 2o56_A 185 NQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFT------------------------DTTSAIQFGRMIEE 240 (407)
T ss_dssp SCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS------------------------CHHHHHHHHHHHGG
T ss_pred ccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC------------------------CHHHHHHHHHHHHh
Q ss_pred cCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHH
Q 021527 191 NKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAG 270 (311)
Q Consensus 191 ~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~ 270 (311)
+|+..+- ..++++..+.++++++.+++||+.|-.+.++++++++++
T Consensus 241 ~~i~~iE----------------------------------~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 286 (407)
T 2o56_A 241 LGIFYYE----------------------------------EPVMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLE 286 (407)
T ss_dssp GCCSCEE----------------------------------CSSCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHH
T ss_pred cCCCEEe----------------------------------CCCChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHH
Q ss_pred cC-CcEEEE
Q 021527 271 WG-ADGVIV 278 (311)
Q Consensus 271 ~G-ADGvIV 278 (311)
.| +|.+.+
T Consensus 287 ~~~~d~v~i 295 (407)
T 2o56_A 287 NGSLSVIQP 295 (407)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
No 475
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=93.16 E-value=0.25 Score=48.81 Aligned_cols=67 Identities=30% Similarity=0.321 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.++++.+.+..-.++-+-+.. +.+..+.+.++++|+.. ++||++| ++.++++++.+.++|||+++||
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~-------g~~~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAH-------GHSKGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSC-------CSBHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccC-------CcchhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHHHcCCCEEEEC
Confidence 577777766433343332222 22445678899999987 7898775 4667999999999999999996
No 476
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=93.15 E-value=0.21 Score=46.30 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=37.6
Q ss_pred chHHHHHHHHhhc-CCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 236 GHVQTLLREIKES-STKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 236 ~~~~~~l~~vk~~-~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
..+.+.++.++.. .++|+.+-+|| +++++.++.+.|+|++.|||.+..
T Consensus 229 ~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~ 277 (299)
T 2jbm_A 229 EELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQA 277 (299)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHS
T ss_pred HHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcC
Confidence 3444555555542 35899999999 589999999999999999998765
No 477
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.15 E-value=0.27 Score=48.59 Aligned_cols=67 Identities=27% Similarity=0.332 Sum_probs=47.8
Q ss_pred HHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEh
Q 021527 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVG 279 (311)
Q Consensus 205 ~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVG 279 (311)
.++++.+.+..-.++-+-+.. +......+.++++|+.. ++||++| ++.++++++.+.++|||+++||
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~-------g~~~~~~~~i~~ir~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSH-------GHSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSC-------TTSHHHHHHHHHHHHHCTTCCEEEE-EECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhccCceEEecccc-------ccchHHHHHHHHHHHHCCCceEEEc-ccCcHHHHHHHHHhCCCEEEEC
Confidence 577777766433333332222 22345678899999987 7899774 4667999999999999999997
No 478
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=93.14 E-value=1.3 Score=39.27 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=30.2
Q ss_pred HHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 240 TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 240 ~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
++++++++. +++|. -+.|+++++++++.++|+||++-
T Consensus 201 ~~v~~~~~~-G~~v~-~WTvn~~~~~~~l~~~GVdgIiT 237 (252)
T 3qvq_A 201 QQVSDIKAA-GYKVL-AFTINDESLALKLYNQGLDAVFS 237 (252)
T ss_dssp HHHHHHHHT-TCEEE-EECCCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHC-CCEEE-EEcCCCHHHHHHHHHcCCCEEEe
Confidence 567777664 67774 46899999999999999999965
No 479
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=93.08 E-value=0.28 Score=44.87 Aligned_cols=70 Identities=20% Similarity=0.360 Sum_probs=44.7
Q ss_pred HHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-cCC-CcEEEEecCcchhccCHHH
Q 021527 81 EALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP-QMS-CPIALFTYYNPILKRGVDN 158 (311)
Q Consensus 81 e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~-~~~-iPiilm~Y~n~i~~~g~~~ 158 (311)
+.++.|++.|+++|| |...|+-.| .|++. .+.++.+++ ..+ +||++-+- .+.-.
T Consensus 136 ~~ak~l~~~G~~aVm---Plg~pIGsG------------~Gi~~---~~~L~~i~~~~~~~vPVI~~GG------I~tps 191 (268)
T 2htm_A 136 VLAKRLAALGTATVM---PLAAPIGSG------------WGVRT---RALLELFAREKASLPPVVVDAG------LGLPS 191 (268)
T ss_dssp HHHHHHHHHTCSCBE---EBSSSTTTC------------CCSTT---HHHHHHHHHTTTTSSCBEEESC------CCSHH
T ss_pred HHHHHHHhcCCCEEE---ecCccCcCC------------cccCC---HHHHHHHHHhcCCCCeEEEeCC------CCCHH
Confidence 555666666777663 333333333 23322 345777777 577 99998652 23356
Q ss_pred HHHHHHHcCCcEEEec
Q 021527 159 FMSTVRDIGIRGLVVP 174 (311)
Q Consensus 159 fi~~~~~aGadGviip 174 (311)
.+..+.+.|+|||++.
T Consensus 192 DAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 192 HAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHTTCCEEEES
T ss_pred HHHHHHHcCCCEEEEC
Confidence 7888999999999995
No 480
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=93.06 E-value=0.18 Score=48.44 Aligned_cols=42 Identities=14% Similarity=0.376 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEEhhH
Q 021527 239 QTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSA 281 (311)
Q Consensus 239 ~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIVGSa 281 (311)
.+.++.+|+.+++||++. |+.++|+++.+.++|+|+++|...
T Consensus 241 ~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~aGad~I~vs~~ 282 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAK-GILRGDDAREAVKHGLNGILVSNH 282 (392)
T ss_dssp HHHHHHHC--CCSCEEEE-EECCHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHhhCCCEEEE-ecCCHHHHHHHHHcCCCEEEeCCC
Confidence 456999999999999997 567899999999999999999543
No 481
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.02 E-value=0.28 Score=48.09 Aligned_cols=45 Identities=36% Similarity=0.392 Sum_probs=37.8
Q ss_pred CchHHHHHHHHhhcC-CCcEEEeeCCCCHHHHHHHHHcCCcEEEEhh
Q 021527 235 SGHVQTLLREIKESS-TKPVAVGFGISKPEHVQQVAGWGADGVIVGS 280 (311)
Q Consensus 235 ~~~~~~~l~~vk~~~-~~Pv~vGfGIst~e~v~~v~~~GADGvIVGS 280 (311)
+....+.++++|+.+ ++||++|++ .++++++.+.++|+|+++||.
T Consensus 262 ~~~~~e~i~~i~~~~p~~pvi~g~~-~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 262 SRRVIETLEMIKADYPDLPVVAGNV-ATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEEEE-CSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHHHHHHHCCCceEEeCCc-CCHHHHHHHHHcCCCEEEEcC
Confidence 345678899999987 799988765 569999999999999999954
No 482
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.98 E-value=0.6 Score=43.49 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=76.0
Q ss_pred HHHHHHHcCCcEEE--e---cCCChh-----hHHHHHHHHHHcCCCeEEE--eCCC--------ChHHHHHHHHHhC--C
Q 021527 159 FMSTVRDIGIRGLV--V---PDVPLE-----ETESLQKEAMKNKIELVLF--TTPT--------TPTDRMKAIVEAS--E 216 (311)
Q Consensus 159 fi~~~~~aGadGvi--i---pDlp~e-----e~~~~~~~~~~~gi~~I~l--isp~--------t~~eri~~i~~~a--~ 216 (311)
.++++.+.|+|++- + ++-+.| +..++.++|.++|+..+.. +.|. ...+.+...+..+ -
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 35677888999954 2 454543 4667888999999987763 3322 2334443333321 2
Q ss_pred ceE--EEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCC--CHH----HHHHHHH-cCCcEEEEhhHhhchhh
Q 021527 217 GFV--YLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGIS--KPE----HVQQVAG-WGADGVIVGSAMVKLLG 287 (311)
Q Consensus 217 gfi--Y~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIs--t~e----~v~~v~~-~GADGvIVGSaiv~~~~ 287 (311)
|.. |.+-...+| +.++++-+.+.+||++-+|=+ +++ +++..++ .||-|+++|=.+...-.
T Consensus 213 GADs~~tivK~~y~-----------e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~ 281 (307)
T 3fok_A 213 GNDSSYTWMKLPVV-----------EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQD 281 (307)
T ss_dssp SSCCSSEEEEEECC-----------TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSS
T ss_pred CCCcCCCEEEeCCc-----------HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCC
Confidence 322 111000122 225777777889987766665 333 3455667 69999999976665321
Q ss_pred hcCCchhHHHHHHHHH
Q 021527 288 EAQSPEEGLKELEKFA 303 (311)
Q Consensus 288 ~~~~~~~~~~~~~~~~ 303 (311)
.++...++.+...+
T Consensus 282 --~dp~~~v~al~~iV 295 (307)
T 3fok_A 282 --GDVAAAVDTAARLV 295 (307)
T ss_dssp --SCHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHH
Confidence 23455555555544
No 483
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=92.97 E-value=3.6 Score=38.59 Aligned_cols=69 Identities=22% Similarity=0.353 Sum_probs=52.1
Q ss_pred CCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCC
Q 021527 61 GKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSC 140 (311)
Q Consensus 61 ~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~i 140 (311)
||..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.+++
T Consensus 99 grvpVi--aGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~------------------s~~~l~~~f~~VA~a~~l 158 (343)
T 2v9d_A 99 RRVPVL--IGTGGTNARETIELSQHAQQAGADGIVVINPYYWKV------------------SEANLIRYFEQVADSVTL 158 (343)
T ss_dssp TSSCEE--EECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCC------------------CHHHHHHHHHHHHHTCSS
T ss_pred CCCcEE--EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhcCC
Confidence 455554 556888999999999999999999999998884321 224556677788888899
Q ss_pred cEEEEecCcch
Q 021527 141 PIALFTYYNPI 151 (311)
Q Consensus 141 Piilm~Y~n~i 151 (311)
||++ |-+|-
T Consensus 159 Piil--Yn~P~ 167 (343)
T 2v9d_A 159 PVML--YNFPA 167 (343)
T ss_dssp CEEE--EECHH
T ss_pred CEEE--EeCch
Confidence 9887 55554
No 484
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=92.97 E-value=0.95 Score=42.79 Aligned_cols=136 Identities=10% Similarity=0.152 Sum_probs=88.6
Q ss_pred cEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccC--CCc
Q 021527 64 ALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQM--SCP 141 (311)
Q Consensus 64 ~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~--~iP 141 (311)
.+-.|.+.|.++.+...+.++.+.+.|...+-+-+-.. ..++-++.++.+|+.+ +++
T Consensus 135 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------------~~~~d~~~v~avR~~~g~~~~ 193 (377)
T 3my9_A 135 RIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------------PHAEELRILETMRGEFGERID 193 (377)
T ss_dssp EEEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------------CHHHHHHHHHHHHHHHGGGSE
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------------cHHHHHHHHHHHHHHhCCCCe
Confidence 44457777777778888888888888999988853221 1223345677777653 456
Q ss_pred EEEEecCcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEE
Q 021527 142 IALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYL 221 (311)
Q Consensus 142 iilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~ 221 (311)
+.+- .|.- +..+++.++.+.++++|+..+- .
T Consensus 194 l~vD--an~~------------------------~~~~~A~~~~~~l~~~~i~~iE--q--------------------- 224 (377)
T 3my9_A 194 LRLD--FNQA------------------------LTPFGAMKILRDVDAFRPTFIE--Q--------------------- 224 (377)
T ss_dssp EEEE--CTTC------------------------CCTTTHHHHHHHHHTTCCSCEE--C---------------------
T ss_pred EEEe--CCCC------------------------cCHHHHHHHHHHHhhcCCCEEE--C---------------------
Confidence 6553 2311 1234566666677777765441 1
Q ss_pred EecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEEhh
Q 021527 222 VSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIVGS 280 (311)
Q Consensus 222 vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIVGS 280 (311)
.++++..+.++++++.+++||+.|--+.+++++.++++.| +|.+.+--
T Consensus 225 -----------P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 273 (377)
T 3my9_A 225 -----------PVPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKI 273 (377)
T ss_dssp -----------CSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCH
T ss_pred -----------CCCccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecc
Confidence 1122223567888888899999999999999999988655 78887643
No 485
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=92.97 E-value=2.4 Score=38.10 Aligned_cols=175 Identities=17% Similarity=0.228 Sum_probs=110.2
Q ss_pred CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchh
Q 021527 73 DPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPIL 152 (311)
Q Consensus 73 ~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~ 152 (311)
+||. ++.+...+++|+|.|=+= |--|=--||. +.+..+++..++|+-+-++.+
T Consensus 24 ~Pdp---v~aA~~ae~aGAdgITvH-----lReDrRHI~d----------------~Dv~~L~~~~~~~lNlE~a~t--- 76 (243)
T 1m5w_A 24 YPDP---VQAAFIAEQAGADGITVH-----LREDRRHITD----------------RDVRILRQTLDTRMNLEMAVT--- 76 (243)
T ss_dssp CSCH---HHHHHHHHTTTCSEEEEE-----CCTTCSSSCH----------------HHHHHHHHHCSSEEEEEECSS---
T ss_pred CCCH---HHHHHHHHHcCCCEEEeC-----CCCCcccCCH----------------HHHHHHHHhcCCCEEeccCCC---
Confidence 5765 556666778999999883 3233333332 244555655678888877644
Q ss_pred ccCHHHHHHHHHHcCCcEE-EecCCCh--------------hhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCc
Q 021527 153 KRGVDNFMSTVRDIGIRGL-VVPDVPL--------------EETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEG 217 (311)
Q Consensus 153 ~~g~~~fi~~~~~aGadGv-iipDlp~--------------ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~g 217 (311)
++|++.+.+.--+-+ ++||-+- +....+.+.+++.|+.+.+|+.|. .+.++...+....
T Consensus 77 ----~emi~ia~~~kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd--~~qi~aA~~~GA~ 150 (243)
T 1m5w_A 77 ----EEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDAD--EEQIKAAAEVGAP 150 (243)
T ss_dssp ----HHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHHTTCS
T ss_pred ----HHHHHHHHHcCCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCcC
Confidence 789999888876654 4566331 235677888999999999999987 4556554443333
Q ss_pred eEEEEecCCccCCCCCCCchHHHHHHHHhhc------CCCcEEEeeCCCCHHHHHHHHHc-CCcEEEEhhHhhc
Q 021527 218 FVYLVSSIGVTGARASISGHVQTLLREIKES------STKPVAVGFGISKPEHVQQVAGW-GADGVIVGSAMVK 284 (311)
Q Consensus 218 fiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~------~~~Pv~vGfGIst~e~v~~v~~~-GADGvIVGSaiv~ 284 (311)
+ +.-.+|....... +..-.+.++++++. .++-|-+|-|.+ .+|+..+... +-.-+=||.+|+-
T Consensus 151 ~--IELhTG~Ya~a~~-~~~~~~el~~i~~aa~~A~~lGL~VnAGHgL~-y~Nv~~ia~ip~i~ElnIGHaiia 220 (243)
T 1m5w_A 151 F--IEIHTGCYADAKT-DAEQAQELARIAKAATFAASLGLKVNAGHGLT-YHNVKAIAAIPEMHELNIGHAIIG 220 (243)
T ss_dssp E--EEEECHHHHHCCS-HHHHHHHHHHHHHHHHHHHHTTCEEEEESSCC-TTTHHHHHTCTTEEEEEECHHHHH
T ss_pred E--EEEechhhhcCCC-chhHHHHHHHHHHHHHHHHHcCCEEecCCCCC-HHHHHHHhhCCCCeEEccCHHHHH
Confidence 3 3323332222111 11222345555442 368899999997 6888888643 2477889988775
No 486
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=92.96 E-value=5.8 Score=36.88 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHH
Q 021527 48 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAI 127 (311)
Q Consensus 48 ~~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~ 127 (311)
+.+.+.+.++.++++..|+ +-...|+.+...++++.+.. .++++++|.++=. .-||-+
T Consensus 69 ~p~~~~L~~~m~~k~~~Li--VALD~~~~~~al~l~~~l~~-~v~~vKvG~~l~~--~~G~~~----------------- 126 (312)
T 3g3d_A 69 HPVASKLLRLMQKKETNLC--LSADVSLARELLQLADALGP-SICMLKTHVDILN--DFTLDV----------------- 126 (312)
T ss_dssp CHHHHHHHHHHHHHTCCEE--EECCCSCHHHHHHHHHHHGG-GCSEEEECGGGCT--TCCHHH-----------------
T ss_pred ChHHHHHHHHHHHhCCCEE--EEeCCCCHHHHHHHHHHhCC-CceEEEEcHHHHH--HhCHHH-----------------
Confidence 3445554444444445554 34466899999999999865 4999999999832 235321
Q ss_pred HHHHHHhhccCCCcEEEEecCcchhccCHHHHHH----HHHHcCCcEEEecCCChhh-HHHHHHHHHHcCCCeEEEeCCC
Q 021527 128 LSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMS----TVRDIGIRGLVVPDVPLEE-TESLQKEAMKNKIELVLFTTPT 202 (311)
Q Consensus 128 ~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~----~~~~aGadGviipDlp~ee-~~~~~~~~~~~gi~~I~lisp~ 202 (311)
++.++++.+..+.+|++..-+.++-.+ ...-++ .+. .|+|.+.+.-..-.+ ...+++.....++.+..+.+-+
T Consensus 127 v~~L~~~a~~~g~~IflDlK~~DIpnT-v~~a~~~a~~~~a-~~aD~vTVHa~~G~~~m~aa~e~~~~~~~gV~vLtsms 204 (312)
T 3g3d_A 127 MKELITLAKCHEFLIFEDRKFADIGNT-VKKQYEGGIFKIA-SWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMS 204 (312)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECSCHHH-HHHHHHCTTTCHH-HHCSEEEEESTTCTHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred HHHHHHHHhhCCCEEEEECcccccHHH-HHHHHHHHHHhhh-ccCCEEEEccCCCHHHHHHHHHhhhhcCCeEEEEEecC
Confidence 223333222246788887655444211 011111 111 368999886443223 3334444344455544444322
Q ss_pred Ch--------HHHHHHHHHhCC-ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCC-------------C
Q 021527 203 TP--------TDRMKAIVEASE-GFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGI-------------S 260 (311)
Q Consensus 203 t~--------~eri~~i~~~a~-gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGI-------------s 260 (311)
.. .+...++++... |..=+|... + . ..-+-.+++--|| .
T Consensus 205 ~~g~l~~~~~~~~V~~lA~~~~~gldGvVcs~-----e--~------------~~~~dfl~vTPGIrp~~~~~~~g~qv~ 265 (312)
T 3g3d_A 205 STGSLATGDYTRAAVRMAEEHSEFVVGFISGS-----R--V------------SMKPEFLHLTPGVQLEAGGDNLGQQYN 265 (312)
T ss_dssp STTCCCCHHHHHHHHHHHHHTTTTEEEEECSS-----C--C------------CCCTTSEEEECSBCSSSEECTTSCEEB
T ss_pred CccccccCCHHHHHHHHHHhhhCCCCeEEeCh-----h--h------------ccCCCeEEEcCCcCCCcCCCCcCCccc
Confidence 11 133344444433 333333211 1 0 0111224454555 3
Q ss_pred CHHHHHHHH-HcCCcEEEEhhHhhc
Q 021527 261 KPEHVQQVA-GWGADGVIVGSAMVK 284 (311)
Q Consensus 261 t~e~v~~v~-~~GADGvIVGSaiv~ 284 (311)
||+ ++. +.|||.+|||-.|++
T Consensus 266 TP~---~Ai~~~GaD~iVVGRpIt~ 287 (312)
T 3g3d_A 266 SPQ---EVIGKRGSDIIIVGRGIIS 287 (312)
T ss_dssp CHH---HHHHTTCCSEEEESHHHHT
T ss_pred CHH---HHHHhCCCCEEEEChhhcC
Confidence 454 445 689999999999997
No 487
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=92.92 E-value=0.83 Score=43.56 Aligned_cols=137 Identities=11% Similarity=0.040 Sum_probs=0.0
Q ss_pred CccEEEEEeCC-----CCChh----hHHHHHHHHHHCCCCEEEE-cCCCCCCCCChHHHHHHHHHHHHcC---CCHHHHH
Q 021527 62 KVALIPYITAG-----DPDLS----TTAEALKLLDSCGSDIIEL-GVPYSDPLADGPVIQAAATRSLARG---TNFNAIL 128 (311)
Q Consensus 62 ~~~li~yi~~G-----~P~~~----~~~e~~~~L~~~GaD~IEl-G~PfsDP~aDGp~Iq~a~~~Al~~G---~~~~~~~ 128 (311)
|..+-.|.+.| +|+.+ ...+.++.+.+.|.+.+-+ - .| .+.++-+
T Consensus 130 r~~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k----------------------~g~~~~~~~~d~ 187 (394)
T 3mqt_A 130 KAQLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCI----------------------IPNDKVSDKEIV 187 (394)
T ss_dssp SSSBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEEC----------------------CCCTTSCHHHHH
T ss_pred CCeEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecc----------------------cCCCccCHHHHH
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEecCC-ChhhHHHHHHHHHHcCCCeEEEeCCCChHHH
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDV-PLEETESLQKEAMKNKIELVLFTTPTTPTDR 207 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviipDl-p~ee~~~~~~~~~~~gi~~I~lisp~t~~er 207 (311)
+.++.+|+.+.--+-++.-.| .-+ ..+++.++.+.+.++|+..+
T Consensus 188 ~~v~avR~a~G~d~~l~vDan------------------------~~~~~~~~A~~~~~~L~~~~i~~i----------- 232 (394)
T 3mqt_A 188 AYLRELREVIGWDMDMMVDCL------------------------YRWTDWQKARWTFRQLEDIDLYFI----------- 232 (394)
T ss_dssp HHHHHHHHHHCSSSEEEEECT------------------------TCCSCHHHHHHHHHHTGGGCCSEE-----------
T ss_pred HHHHHHHHHhCCCCeEEEECC------------------------CCCCCHHHHHHHHHHHhhcCCeEE-----------
Q ss_pred HHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcC-CcEEEE
Q 021527 208 MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG-ADGVIV 278 (311)
Q Consensus 208 i~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~G-ADGvIV 278 (311)
...++++..+.++++|+.+++||+.|-.+.++++++++++.| +|.+.+
T Consensus 233 -----------------------EeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 281 (394)
T 3mqt_A 233 -----------------------EACLQHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQS 281 (394)
T ss_dssp -----------------------ESCSCTTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred -----------------------ECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEec
No 488
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=92.91 E-value=1.4 Score=33.41 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=52.4
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhcc---CCCcEEEEecCcchhccCH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ---MSCPIALFTYYNPILKRGV 156 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~---~~iPiilm~Y~n~i~~~g~ 156 (311)
.+.++.+.+...|.+-+++-. |-.|| ++.++++|+. .++|+++++-.. -
T Consensus 36 ~~al~~l~~~~~dlvllD~~~--p~~~g--------------------~~~~~~l~~~~~~~~~pii~~s~~~------~ 87 (122)
T 3gl9_A 36 QIALEKLSEFTPDLIVLXIMM--PVMDG--------------------FTVLKKLQEKEEWKRIPVIVLTAKG------G 87 (122)
T ss_dssp HHHHHHHTTBCCSEEEECSCC--SSSCH--------------------HHHHHHHHTSTTTTTSCEEEEESCC------S
T ss_pred HHHHHHHHhcCCCEEEEeccC--CCCcH--------------------HHHHHHHHhcccccCCCEEEEecCC------c
Confidence 556666777889999997543 55566 4566777653 578999987432 2
Q ss_pred HHHHHHHHHcCCcEEEecCCChhhHH
Q 021527 157 DNFMSTVRDIGIRGLVVPDVPLEETE 182 (311)
Q Consensus 157 ~~fi~~~~~aGadGviipDlp~ee~~ 182 (311)
......+.+.|+++++.-.+..++..
T Consensus 88 ~~~~~~~~~~Ga~~~l~KP~~~~~L~ 113 (122)
T 3gl9_A 88 EEDESLALSLGARKVMRKPFSPSQFI 113 (122)
T ss_dssp HHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred hHHHHHHHhcChhhhccCCCCHHHHH
Confidence 45667788999999988766555544
No 489
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=92.84 E-value=0.23 Score=47.03 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=62.8
Q ss_pred HHHHHHHHHHc-CC-ccEEEEEeCCC------CChhhHHHHHHHHHHCCCCEEEEcCCCCCCC---CChHHHHHHHHHHH
Q 021527 50 LAETFTRLKKQ-GK-VALIPYITAGD------PDLSTTAEALKLLDSCGSDIIELGVPYSDPL---ADGPVIQAAATRSL 118 (311)
Q Consensus 50 i~~~f~~~~~~-~~-~~li~yi~~G~------P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~---aDGp~Iq~a~~~Al 118 (311)
+.+.++..++. |. ..+..=+.+.+ -+.+++.++++.|++.|+|.|++......+- ..+|
T Consensus 211 ~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~---------- 280 (363)
T 3l5l_A 211 LLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP---------- 280 (363)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT----------
T ss_pred HHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc----------
Confidence 34566666654 32 23444455432 3457899999999999999999954321110 0121
Q ss_pred HcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcC-CcEEEe
Q 021527 119 ARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVV 173 (311)
Q Consensus 119 ~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aG-adGvii 173 (311)
+.+ .+.++++|+.+++||+.-+-.+ . .+.++.+.+.| +|.|.+
T Consensus 281 --~~~----~~~~~~ir~~~~iPVi~~GgI~-----s-~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 281 --AFM----GPIAERVRREAKLPVTSAWGFG-----T-PQLAEAALQANQLDLVSV 324 (363)
T ss_dssp --TTT----HHHHHHHHHHHTCCEEECSSTT-----S-HHHHHHHHHTTSCSEEEC
T ss_pred --chh----HHHHHHHHHHcCCcEEEeCCCC-----C-HHHHHHHHHCCCccEEEe
Confidence 122 2467778888899999876432 1 23455666677 999887
No 490
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=92.83 E-value=0.79 Score=40.68 Aligned_cols=98 Identities=8% Similarity=0.017 Sum_probs=62.4
Q ss_pred HHHHHHH---HHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCC-CCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCH
Q 021527 49 GLAETFT---RLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCG-SDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 124 (311)
Q Consensus 49 ~i~~~f~---~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~G-aD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~ 124 (311)
.+.+.++ .+++.|.+.-+.. -+++| .+.++.+.+.| +|.|-+. .-+|=.+|.. + .
T Consensus 99 ~~~~~i~~~~~i~~~G~k~gval-np~tp-----~~~~~~~l~~g~~D~Vlvm--sV~pGf~gq~------------f-~ 157 (227)
T 1tqx_A 99 DTERCIQLAKEIRDNNLWCGISI-KPKTD-----VQKLVPILDTNLINTVLVM--TVEPGFGGQS------------F-M 157 (227)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE-CTTSC-----GGGGHHHHTTTCCSEEEEE--SSCTTCSSCC------------C-C
T ss_pred CHHHHHHHHHHHHHcCCeEEEEe-CCCCc-----HHHHHHHhhcCCcCEEEEe--eeccCCCCcc------------c-c
Confidence 3667777 7777776655433 66777 66677777765 9999774 1234344421 0 1
Q ss_pred HHHHHHHHHhhccC-CCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEec
Q 021527 125 NAILSMLKEVVPQM-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVP 174 (311)
Q Consensus 125 ~~~~~~i~~ir~~~-~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGviip 174 (311)
...++-++++|+.. +++|.+-|-.| .+-+..+.++|+|.+++.
T Consensus 158 ~~~l~ki~~lr~~~~~~~I~VdGGI~-------~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 158 HDMMGKVSFLRKKYKNLNIQVDGGLN-------IETTEISASHGANIIVAG 201 (227)
T ss_dssp GGGHHHHHHHHHHCTTCEEEEESSCC-------HHHHHHHHHHTCCEEEES
T ss_pred hHHHHHHHHHHHhccCCeEEEECCCC-------HHHHHHHHHcCCCEEEEe
Confidence 12244555555543 78888876444 456778999999999984
No 491
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=92.82 E-value=3.3 Score=38.36 Aligned_cols=178 Identities=15% Similarity=0.175 Sum_probs=96.0
Q ss_pred hhhHHHHHHHHHHCC----CCEEEEc-C---CCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEec
Q 021527 76 LSTTAEALKLLDSCG----SDIIELG-V---PYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTY 147 (311)
Q Consensus 76 ~~~~~e~~~~L~~~G----aD~IElG-~---PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y 147 (311)
.+...+.++.|.+.| ..++--+ + |=+.|+ + -.|..+++.++++++++++..+|++--.+
T Consensus 54 ~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~---------s----f~Glg~~~GL~~L~~~~~e~GLpv~Tev~ 120 (298)
T 3fs2_A 54 RDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLK---------A----ARGIGLEKALEVFSDLKKEYGFPVLTDIH 120 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC----------------------CCHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCC---------C----cCCcCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 467788888887764 4444432 0 222222 0 13455778899999999999999876432
Q ss_pred CcchhccCHHHHHHHHHHcCCcEEEecCCChhhHHHHHHHHHHcCCCeEEEeCCC--ChHHH---HHHHHHhC-CceEEE
Q 021527 148 YNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPT--TPTDR---MKAIVEAS-EGFVYL 221 (311)
Q Consensus 148 ~n~i~~~g~~~fi~~~~~aGadGviipDlp~ee~~~~~~~~~~~gi~~I~lisp~--t~~er---i~~i~~~a-~gfiY~ 221 (311)
+ ..-++.+.+. +|-+-|+-.-..... +..++.+.|. +|.+-+.. +++|. ++.+.+.. ...+.|
T Consensus 121 -D-------~~~v~~l~~~-vd~lkIgA~~~~n~~-LLr~va~~gk-PVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 121 -T-------EEQCAAVAPV-VDVLQIPAFLCRQTD-LLIAAARTGR-VVNVKKGQFLAPWDMKNVLAKITESGNPNVLAT 189 (298)
T ss_dssp -S-------HHHHHHHTTT-CSEEEECGGGTTCHH-HHHHHHHTTS-EEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEE
T ss_pred -C-------HHHHHHHHhh-CCEEEECccccCCHH-HHHHHHccCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 2 2344555555 899888843223333 4445566774 56666654 33332 23332322 234444
Q ss_pred E--ecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEe---------------eCCCC--HHHHHHHHHcCCcEEEEhhHh
Q 021527 222 V--SSIGVTGARASISGHVQTLLREIKESSTKPVAVG---------------FGISK--PEHVQQVAGWGADGVIVGSAM 282 (311)
Q Consensus 222 v--s~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vG---------------fGIst--~e~v~~v~~~GADGvIVGSai 282 (311)
- +.+ +.. ....++ ..+..+|+ +++||++. .|-+. +.-.......||||++|=.-+
T Consensus 190 erg~~y---~~~-~~~vdl-~~i~~lk~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 190 ERGVSF---GYN-TLVSDM-RALPIMAG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp ECCEEC---SSS-CEECCT-THHHHHHT-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred ECCCCC---CCC-CCccCH-HHHHHHHH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 2 222 221 111122 34777888 89999772 23110 233456667899999986554
Q ss_pred h
Q 021527 283 V 283 (311)
Q Consensus 283 v 283 (311)
.
T Consensus 264 t 264 (298)
T 3fs2_A 264 D 264 (298)
T ss_dssp S
T ss_pred C
Confidence 4
No 492
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.82 E-value=1.1 Score=41.45 Aligned_cols=70 Identities=19% Similarity=0.325 Sum_probs=52.7
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.||..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 90 ~grvpVi--aGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~------------------s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 90 KGRIPVI--AGTGANSTREAVALTEAAKSGGADACLLVTPYYNKP------------------TQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp TTSSCEE--EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHSC
T ss_pred CCCCcEE--EeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC------------------CHHHHHHHHHHHHHhcC
Confidence 3554554 467889999999999999999999999998874431 22345667777877789
Q ss_pred CcEEEEecCcch
Q 021527 140 CPIALFTYYNPI 151 (311)
Q Consensus 140 iPiilm~Y~n~i 151 (311)
+||++ |-+|-
T Consensus 150 lPiil--Yn~P~ 159 (314)
T 3qze_A 150 IPQIL--YNVPG 159 (314)
T ss_dssp SCEEE--EECHH
T ss_pred CCEEE--EeCcc
Confidence 99988 54553
No 493
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=92.79 E-value=1.1 Score=33.82 Aligned_cols=75 Identities=23% Similarity=0.306 Sum_probs=51.4
Q ss_pred HHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHH
Q 021527 80 AEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNF 159 (311)
Q Consensus 80 ~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~f 159 (311)
.+.++.+.+...|++-+++-. |-.|| ++.++++|+..++|+++++-.+ -...
T Consensus 36 ~~al~~~~~~~~dlii~D~~~--p~~~g--------------------~~~~~~lr~~~~~~ii~~t~~~------~~~~ 87 (120)
T 3f6p_A 36 NEAVEMVEELQPDLILLDIML--PNKDG--------------------VEVCREVRKKYDMPIIMLTAKD------SEID 87 (120)
T ss_dssp HHHHHHHHTTCCSEEEEETTS--TTTHH--------------------HHHHHHHHTTCCSCEEEEEESS------CHHH
T ss_pred HHHHHHHhhCCCCEEEEeCCC--CCCCH--------------------HHHHHHHHhcCCCCEEEEECCC------ChHH
Confidence 455666677789999997543 32344 4577777777789999887432 2344
Q ss_pred HHHHHHcCCcEEEecCCChhhHH
Q 021527 160 MSTVRDIGIRGLVVPDVPLEETE 182 (311)
Q Consensus 160 i~~~~~aGadGviipDlp~ee~~ 182 (311)
...+.+.|+++++.-.+..++..
T Consensus 88 ~~~~~~~ga~~~l~KP~~~~~l~ 110 (120)
T 3f6p_A 88 KVIGLEIGADDYVTKPFSTRELL 110 (120)
T ss_dssp HHHHHHTTCCEEEEESCCHHHHH
T ss_pred HHHHHhCCcceeEcCCCCHHHHH
Confidence 56688999999988756555543
No 494
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=92.79 E-value=4 Score=44.39 Aligned_cols=171 Identities=13% Similarity=0.100 Sum_probs=92.4
Q ss_pred HHHHHHcCCccEEEEEe-----CCCCCh--hhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHH
Q 021527 54 FTRLKKQGKVALIPYIT-----AGDPDL--STTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNA 126 (311)
Q Consensus 54 f~~~~~~~~~~li~yi~-----~G~P~~--~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~ 126 (311)
+..+++......+..+. .||..+ +...+.++...++|+|.+.+-.+.||- .- ..+
T Consensus 597 l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~----~~--------------~~~ 658 (1150)
T 3hbl_A 597 LERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWV----DQ--------------MKV 658 (1150)
T ss_dssp HHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEEECTTCCG----GG--------------GHH
T ss_pred HHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEEEEEeeCCHH----HH--------------HHH
Confidence 33444444444444444 355443 335677888899999999997666652 11 112
Q ss_pred HHHHHHHhhccCCCcEEEEecCcchh------ccCH---HHHHHHHHHcCCcEEEecC----CChhhHHHHHHHHHHc-C
Q 021527 127 ILSMLKEVVPQMSCPIALFTYYNPIL------KRGV---DNFMSTVRDIGIRGLVVPD----VPLEETESLQKEAMKN-K 192 (311)
Q Consensus 127 ~~~~i~~ir~~~~iPiilm~Y~n~i~------~~g~---~~fi~~~~~aGadGviipD----lp~ee~~~~~~~~~~~-g 192 (311)
.++.+++....-....+|+...+ .+.. .++++.+.++|+|.+.++| +.+++..++...+++. +
T Consensus 659 ---~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~ 735 (1150)
T 3hbl_A 659 ---ANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVD 735 (1150)
T ss_dssp ---HHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCC
T ss_pred ---HHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhcC
Confidence 23333332222233345552211 1233 3456678889999999998 5567777777777664 5
Q ss_pred CCeEEEeCCCChHHHHHHHHHhCCceEEEE-ecCCccCCCCCCCchHHHHHHHHhh
Q 021527 193 IELVLFTTPTTPTDRMKAIVEASEGFVYLV-SSIGVTGARASISGHVQTLLREIKE 247 (311)
Q Consensus 193 i~~I~lisp~t~~eri~~i~~~a~gfiY~v-s~~G~TG~~~~~~~~~~~~l~~vk~ 247 (311)
+.+-+-...+.--.-...++....|..++- +..| -|.+++. +.+.+++..++.
T Consensus 736 ~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~G-lG~~~gn-~~lE~lv~~L~~ 789 (1150)
T 3hbl_A 736 LPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVAS-MSGLTSQ-PSANSLYYALNG 789 (1150)
T ss_dssp SCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGG-GCSBTSC-CBHHHHHHHTTT
T ss_pred CeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccc-cCCCCCC-ccHHHHHHHHHh
Confidence 444344443333233333444445666663 3433 3444333 346666666654
No 495
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=92.78 E-value=0.49 Score=44.29 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=63.8
Q ss_pred ChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCCCcEEEEecCcchhcc
Q 021527 75 DLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKR 154 (311)
Q Consensus 75 ~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~ 154 (311)
+.++..+.++.|++.|+++||= |+... + ++..+++++.+++||..-...+
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iE~------P~~~~---------------~----~~~~~~l~~~~~iPI~~de~~~----- 250 (359)
T 1mdl_A 201 DVPAAIKRSQALQQEGVTWIEE------PTLQH---------------D----YEGHQRIQSKLNVPVQMGENWL----- 250 (359)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEC------CSCTT---------------C----HHHHHHHHHTCSSCEEECTTCC-----
T ss_pred CHHHHHHHHHHHHHhCCCeEEC------CCChh---------------h----HHHHHHHHHhCCCCEEeCCCCC-----
Confidence 4577888899999999999883 32110 1 3466778888899998865432
Q ss_pred CHHHHHHHHHHcCCcEEEecCCC----hhhHHHHHHHHHHcCCCeEEE
Q 021527 155 GVDNFMSTVRDIGIRGLVVPDVP----LEETESLQKEAMKNKIELVLF 198 (311)
Q Consensus 155 g~~~fi~~~~~aGadGviipDlp----~ee~~~~~~~~~~~gi~~I~l 198 (311)
+.++|.+.+.+-.+|.+ .+|+. +.+..++...++++|+...+-
T Consensus 251 ~~~~~~~~i~~~~~d~v-~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 251 GPEEMFKALSIGACRLA-MPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp SHHHHHHHHHTTCCSEE-CCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred CHHHHHHHHHcCCCCEE-eecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 34555555555557775 55543 467888999999999986543
No 496
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=92.75 E-value=5.6 Score=36.11 Aligned_cols=193 Identities=12% Similarity=0.102 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHcCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHH
Q 021527 49 GLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIL 128 (311)
Q Consensus 49 ~i~~~f~~~~~~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~ 128 (311)
.+.+.+.++.++++..|+ +-...|+.+...++++.+.. .++++++|.++-. .-||- +.+
T Consensus 16 ~~~~~l~~~m~~k~~~Li--VALD~~~~~~al~l~~~l~~-~v~~~KvG~~l~~--~~G~~----------------~~v 74 (267)
T 3gdm_A 16 PVAAKLFNIMHEKQTNLC--ASLDVRTTKELLELVEALGP-KICLLKTHVDILT--DFSME----------------GTV 74 (267)
T ss_dssp HHHHHHHHHHHHHTCCEE--EECCCSCHHHHHHHHHHHGG-GCSEEEECGGGCS--SCCTT----------------TTH
T ss_pred hHHHHHHHHHHhhCCCEE--EEeCcCCHHHHHHHHHHhCC-cCcEEEECHHHHH--hcCHH----------------HHH
Confidence 344444444443344454 34566899999999999865 4999999999832 12422 012
Q ss_pred HHHHHhhccCCCcEEEEecCcchhccCHHH-H---HHHHHHcCCcEEEecCCC-hhhHHHHHHHHHHc---CCCeEEEeC
Q 021527 129 SMLKEVVPQMSCPIALFTYYNPILKRGVDN-F---MSTVRDIGIRGLVVPDVP-LEETESLQKEAMKN---KIELVLFTT 200 (311)
Q Consensus 129 ~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~-f---i~~~~~aGadGviipDlp-~ee~~~~~~~~~~~---gi~~I~lis 200 (311)
+.++++.+..+.+|++..-+.++-.+ ..+ + +..+.+ ++|.+.++-.. .+-...+++.+++. +-.++.+..
T Consensus 75 ~~L~~l~~~~g~~IflDlK~~DIpnT-v~~~y~~a~~~~~~-~ad~vTVH~~~G~~~~~aa~~~a~~~~~~~~~lllla~ 152 (267)
T 3gdm_A 75 KPLKALSAKYNFLLFEDRRFADIGNT-VKLQYSAGVYRIAE-WADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAE 152 (267)
T ss_dssp HHHHHHHHHHTCEEEEEEEECCCHHH-HHHHHHSTTTCHHH-HCSEEEEEGGGCTHHHHHHHHHHHHHCCSCCEEEEECS
T ss_pred HHHHHHHhhcCCeEEEEeccccchHH-HHHHHHHHHHHHHh-hCCEEEEeccCCHHHHHHHHHHHHhhcccCCCeEEEEE
Confidence 23444433346778887655444211 011 1 011222 37888885332 23344456666555 333333332
Q ss_pred CCCh---------HHHHHHHHHhCC-ceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCC----------
Q 021527 201 PTTP---------TDRMKAIVEASE-GFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGIS---------- 260 (311)
Q Consensus 201 p~t~---------~eri~~i~~~a~-gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIs---------- 260 (311)
.|+ .+...++++.+. |..=+|... + .+. +..-+--+++-=||+
T Consensus 153 -mss~~~l~~~~~~~~v~~~A~~a~~g~dGvV~s~-----~--~~~---------~~~g~~f~~vTPGIr~~~~g~~~gd 215 (267)
T 3gdm_A 153 -LSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQR-----D--MGG---------RDEGYDWLIMTPGVGLDDKGDALGQ 215 (267)
T ss_dssp -CCSTTCCCCHHHHHHHHHHHTTCTTTEEEEECSS-----C--CCC---------GGGTCCCEEEECSEECCCTTCTTGG
T ss_pred -cCCccccccCCHHHHHHHHHHHHhcCCCeEEeCc-----c--chh---------hccCCCCEEECCCcCCCcCCCcccc
Confidence 222 134444555443 433333211 1 110 222112233433332
Q ss_pred ---CHHHHHHHHHcCCcEEEEhhHhhc
Q 021527 261 ---KPEHVQQVAGWGADGVIVGSAMVK 284 (311)
Q Consensus 261 ---t~e~v~~v~~~GADGvIVGSaiv~ 284 (311)
||+ ++.+.|+|-+|||=.|++
T Consensus 216 Q~rTP~---~Ai~~GaD~iVVGRpI~~ 239 (267)
T 3gdm_A 216 QYRTVD---DVVSTGSDIIIVGRGLFA 239 (267)
T ss_dssp GSEEHH---HHHHTTCSEEEECGGGTS
T ss_pred CCCCHH---HHHHcCCCEEEEChhhcc
Confidence 454 445799999999998887
No 497
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.75 E-value=3.3 Score=38.03 Aligned_cols=70 Identities=23% Similarity=0.333 Sum_probs=51.7
Q ss_pred cCCccEEEEEeCCCCChhhHHHHHHHHHHCCCCEEEEcCCCCCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhhccCC
Q 021527 60 QGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMS 139 (311)
Q Consensus 60 ~~~~~li~yi~~G~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~aDGp~Iq~a~~~Al~~G~~~~~~~~~i~~ir~~~~ 139 (311)
.||..+| .-.|..+.+++++.++..++.|+|.+-+--||-.+. +-+.+++..++|.+.++
T Consensus 83 ~grvpvi--aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~------------------~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 83 GDRAKLI--AGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKP------------------SQEGLLAHFGAIAAATE 142 (304)
T ss_dssp TTTSEEE--EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHCC
T ss_pred CCCCcEE--ecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhcC
Confidence 3555544 556888999999999999999999999998884331 22345667777777789
Q ss_pred CcEEEEecCcch
Q 021527 140 CPIALFTYYNPI 151 (311)
Q Consensus 140 iPiilm~Y~n~i 151 (311)
+||++ |-+|-
T Consensus 143 lPiil--Yn~P~ 152 (304)
T 3cpr_A 143 VPICL--YDIPG 152 (304)
T ss_dssp SCEEE--EECHH
T ss_pred CCEEE--EeCcc
Confidence 99887 54454
No 498
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.74 E-value=1.3 Score=41.20 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=73.0
Q ss_pred CCCcEEEEecCcchhccCHHHHHHHHHHcCCcEEEe-cCCChhhHHHHHHHHHHc-CCC-eEEEe--CCCChHHHHHHHH
Q 021527 138 MSCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVV-PDVPLEETESLQKEAMKN-KIE-LVLFT--TPTTPTDRMKAIV 212 (311)
Q Consensus 138 ~~iPiilm~Y~n~i~~~g~~~fi~~~~~aGadGvii-pDlp~ee~~~~~~~~~~~-gi~-~I~li--sp~t~~eri~~i~ 212 (311)
++.|++.-.... + ...+++..+.++|+-|++. ..++.++..+..+.+++. +.. .+-++ .|. ..+.++...
T Consensus 11 ~~~Pii~apM~g-~---s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~-~~~~~~~a~ 85 (332)
T 2z6i_A 11 IDYPIFQGGMAW-V---ADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPF-VEDIVDLVI 85 (332)
T ss_dssp CSSSEEECCCTT-T---CCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTT-HHHHHHHHH
T ss_pred CCCCEEeCCCCC-C---CcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCC-HHHHHHHHH
Confidence 567877654432 2 2357888899999988885 345666666555555543 211 22222 232 234444443
Q ss_pred HhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhcCCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 213 EASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 213 ~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
+ .|+..+....| .+. ++++++|+. ++|+++ .+.+.+.++.+.+.|+|++++
T Consensus 86 ~--~g~d~V~~~~g-------~p~---~~i~~l~~~-g~~v~~--~v~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 86 E--EGVKVVTTGAG-------NPS---KYMERFHEA-GIIVIP--VVPSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp H--TTCSEEEECSS-------CGG---GTHHHHHHT-TCEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred H--CCCCEEEECCC-------ChH---HHHHHHHHc-CCeEEE--EeCCHHHHHHHHHcCCCEEEE
Confidence 4 34444432221 232 456777764 677764 578999999999999999999
No 499
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=92.74 E-value=2 Score=32.50 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=58.7
Q ss_pred EEecCCChhhHHHHHHHHHHcCCCeEEEeCCCChHHHHHHHHHhCCceEEEEecCCccCCCCCCCchHHHHHHHHhhc--
Q 021527 171 LVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKES-- 248 (311)
Q Consensus 171 viipDlp~ee~~~~~~~~~~~gi~~I~lisp~t~~eri~~i~~~a~gfiY~vs~~G~TG~~~~~~~~~~~~l~~vk~~-- 248 (311)
+++.|=.......+...+++.|...+. + .+..+-++.+.+.....+.+ ... ..| .+-.++++++|+.
T Consensus 5 ILivdd~~~~~~~l~~~l~~~g~~v~~-~--~~~~~al~~l~~~~~dlvll-D~~-~p~------~~g~~~~~~l~~~~~ 73 (122)
T 3gl9_A 5 VLLVDDSAVLRKIVSFNLKKEGYEVIE-A--ENGQIALEKLSEFTPDLIVL-XIM-MPV------MDGFTVLKKLQEKEE 73 (122)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEE-E--SSHHHHHHHHTTBCCSEEEE-CSC-CSS------SCHHHHHHHHHTSTT
T ss_pred EEEEeCCHHHHHHHHHHHHHCCcEEEE-e--CCHHHHHHHHHhcCCCEEEE-ecc-CCC------CcHHHHHHHHHhccc
Confidence 344443333455567777888876442 2 34445555443333333333 211 111 1234788888775
Q ss_pred -CCCcEEEeeCCCCHHHHHHHHHcCCcEEEE
Q 021527 249 -STKPVAVGFGISKPEHVQQVAGWGADGVIV 278 (311)
Q Consensus 249 -~~~Pv~vGfGIst~e~v~~v~~~GADGvIV 278 (311)
.++|+++=.+-.+.+...+..+.|||+++.
T Consensus 74 ~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~ 104 (122)
T 3gl9_A 74 WKRIPVIVLTAKGGEEDESLALSLGARKVMR 104 (122)
T ss_dssp TTTSCEEEEESCCSHHHHHHHHHTTCSEEEE
T ss_pred ccCCCEEEEecCCchHHHHHHHhcChhhhcc
Confidence 368998888888899999999999999865
No 500
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=92.71 E-value=0.81 Score=42.97 Aligned_cols=103 Identities=12% Similarity=0.096 Sum_probs=64.5
Q ss_pred HHHHHHHHHHc-CC-ccEEEEEeCC-----CCChhhHHHHHHHHHHCCCCEEEEcCCCCCCC---CChHHHHHHHHHHHH
Q 021527 50 LAETFTRLKKQ-GK-VALIPYITAG-----DPDLSTTAEALKLLDSCGSDIIELGVPYSDPL---ADGPVIQAAATRSLA 119 (311)
Q Consensus 50 i~~~f~~~~~~-~~-~~li~yi~~G-----~P~~~~~~e~~~~L~~~GaD~IElG~PfsDP~---aDGp~Iq~a~~~Al~ 119 (311)
+.+.++..++. |. ..+..=+.+. .-+.+++.++++.|++.|+|.|++.....++- ..+|
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~----------- 273 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP----------- 273 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT-----------
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc-----------
Confidence 45566666654 32 2344445552 34568899999999999999999964221211 1111
Q ss_pred cCCCHHHHHHHHHHhhccCCCcEEEEecCcchhccCHHHHHHHHHHcC-CcEEEec
Q 021527 120 RGTNFNAILSMLKEVVPQMSCPIALFTYYNPILKRGVDNFMSTVRDIG-IRGLVVP 174 (311)
Q Consensus 120 ~G~~~~~~~~~i~~ir~~~~iPiilm~Y~n~i~~~g~~~fi~~~~~aG-adGviip 174 (311)
+.+ ++.++++|+.+++||+..+-.+ . .+.++.+.+.| +|.|-+.
T Consensus 274 -~~~----~~~~~~ir~~~~iPVi~~Ggi~-----t-~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 274 -GFQ----VPFADAVRKRVGLRTGAVGLIT-----T-PEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp -TTT----HHHHHHHHHHHCCEEEECSSCC-----C-HHHHHHHHHTTSCSEEEES
T ss_pred -ccc----HHHHHHHHHHcCceEEEECCCC-----C-HHHHHHHHHCCCceEEEec
Confidence 122 3477788888899998876432 1 23455666667 9999883
Done!