Query 021530
Match_columns 311
No_of_seqs 129 out of 1718
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 03:43:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021530.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021530hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 5.3E-47 1.1E-51 313.2 23.5 292 2-310 20-320 (322)
2 PRK03592 haloalkane dehalogena 100.0 2.4E-39 5.3E-44 278.9 22.0 268 4-309 7-288 (295)
3 PLN02824 hydrolase, alpha/beta 100.0 2.7E-39 5.8E-44 278.5 20.8 276 3-310 7-294 (294)
4 PRK00870 haloalkane dehalogena 100.0 7.2E-38 1.6E-42 270.5 24.4 273 4-310 19-301 (302)
5 PRK03204 haloalkane dehalogena 100.0 4.8E-38 1E-42 269.1 18.5 273 4-308 14-286 (286)
6 PLN02679 hydrolase, alpha/beta 100.0 1.1E-37 2.3E-42 274.9 20.7 277 7-309 64-356 (360)
7 TIGR02240 PHA_depoly_arom poly 100.0 3.3E-37 7.1E-42 263.1 17.6 262 4-309 2-265 (276)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.7E-35 3.6E-40 253.4 22.8 269 4-309 5-282 (282)
9 PLN02965 Probable pheophorbida 100.0 2.9E-35 6.3E-40 248.2 21.4 244 27-309 5-252 (255)
10 PRK10349 carboxylesterase BioH 100.0 2.3E-35 5E-40 249.0 18.5 252 15-308 3-254 (256)
11 PLN02578 hydrolase 100.0 6.1E-35 1.3E-39 257.2 21.1 118 7-128 69-186 (354)
12 PLN03087 BODYGUARD 1 domain co 100.0 7.2E-35 1.6E-39 261.0 19.7 126 3-129 175-309 (481)
13 PRK06489 hypothetical protein; 100.0 1.8E-34 3.8E-39 254.9 20.8 117 11-128 47-188 (360)
14 PLN03084 alpha/beta hydrolase 100.0 5.1E-34 1.1E-38 250.8 21.6 271 8-309 109-383 (383)
15 TIGR03056 bchO_mg_che_rel puta 100.0 9.6E-34 2.1E-38 241.7 21.1 267 6-308 8-278 (278)
16 PRK10673 acyl-CoA esterase; Pr 100.0 3E-33 6.6E-38 235.8 19.6 238 26-310 17-255 (255)
17 PRK11126 2-succinyl-6-hydroxy- 100.0 1.5E-32 3.2E-37 229.9 20.7 97 27-128 4-101 (242)
18 PRK08775 homoserine O-acetyltr 100.0 1.8E-33 3.9E-38 247.0 14.5 118 6-128 38-172 (343)
19 PRK07581 hypothetical protein; 100.0 6.8E-33 1.5E-37 243.2 14.0 119 10-128 22-158 (339)
20 KOG1454 Predicted hydrolase/ac 100.0 6.9E-32 1.5E-36 232.4 17.2 254 26-310 59-324 (326)
21 TIGR03611 RutD pyrimidine util 100.0 1.1E-31 2.3E-36 225.9 17.6 253 16-309 1-257 (257)
22 KOG2984 Predicted hydrolase [G 100.0 8.7E-32 1.9E-36 205.6 14.3 250 3-310 20-276 (277)
23 TIGR01392 homoserO_Ac_trn homo 100.0 2.5E-32 5.5E-37 240.4 12.0 120 10-129 12-162 (351)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.9E-31 6.4E-36 221.9 17.7 247 15-308 1-251 (251)
25 TIGR01738 bioH putative pimelo 100.0 3.9E-31 8.5E-36 220.5 18.1 243 22-307 1-245 (245)
26 PRK00175 metX homoserine O-ace 100.0 8E-32 1.7E-36 239.1 14.7 119 10-128 29-181 (379)
27 TIGR01250 pro_imino_pep_2 prol 100.0 7.4E-31 1.6E-35 224.2 20.1 122 6-127 4-129 (288)
28 PLN02385 hydrolase; alpha/beta 100.0 5.9E-31 1.3E-35 231.6 19.6 119 9-128 67-196 (349)
29 PRK10749 lysophospholipase L2; 100.0 3.9E-30 8.3E-35 224.6 24.2 123 6-128 33-165 (330)
30 PLN02211 methyl indole-3-aceta 100.0 6.1E-30 1.3E-34 217.2 23.3 115 11-127 4-120 (273)
31 PHA02857 monoglyceride lipase; 100.0 2.5E-29 5.3E-34 214.6 22.1 120 8-128 5-131 (276)
32 TIGR03695 menH_SHCHC 2-succiny 100.0 3.1E-29 6.8E-34 209.3 18.6 102 26-128 2-104 (251)
33 PRK14875 acetoin dehydrogenase 100.0 2.9E-29 6.2E-34 223.1 19.4 256 7-309 112-370 (371)
34 KOG4409 Predicted hydrolase/ac 100.0 1.7E-28 3.7E-33 203.9 22.2 121 6-128 67-194 (365)
35 PF12697 Abhydrolase_6: Alpha/ 100.0 9.8E-31 2.1E-35 215.3 8.6 100 28-128 1-100 (228)
36 PLN02298 hydrolase, alpha/beta 100.0 4.3E-29 9.2E-34 218.4 19.2 120 8-128 36-168 (330)
37 PLN02894 hydrolase, alpha/beta 100.0 2.3E-28 4.9E-33 218.0 22.1 112 15-128 93-210 (402)
38 TIGR01249 pro_imino_pep_1 prol 100.0 4.8E-29 1E-33 215.7 16.8 122 5-128 5-129 (306)
39 PRK05855 short chain dehydroge 100.0 1.6E-28 3.6E-33 230.7 20.1 122 4-127 3-129 (582)
40 PLN02980 2-oxoglutarate decarb 100.0 3.1E-28 6.8E-33 247.3 21.6 110 16-127 1360-1478(1655)
41 PLN02511 hydrolase 99.9 1.6E-26 3.4E-31 205.4 18.4 267 6-309 73-364 (388)
42 PLN02652 hydrolase; alpha/beta 99.9 7.4E-26 1.6E-30 200.4 22.5 114 12-127 119-243 (395)
43 PRK06765 homoserine O-acetyltr 99.9 4.4E-26 9.5E-31 201.1 19.9 117 12-128 39-195 (389)
44 COG2267 PldB Lysophospholipase 99.9 3.4E-25 7.3E-30 189.2 24.0 123 7-129 13-142 (298)
45 KOG2382 Predicted alpha/beta h 99.9 1.1E-24 2.3E-29 181.0 16.4 247 23-309 51-312 (315)
46 TIGR01607 PST-A Plasmodium sub 99.9 1.4E-22 3E-27 176.7 21.6 119 10-128 4-184 (332)
47 PRK10985 putative hydrolase; P 99.9 4.3E-22 9.2E-27 173.5 22.0 121 8-129 35-168 (324)
48 PRK05077 frsA fermentation/res 99.9 7.6E-22 1.6E-26 176.3 22.3 228 12-310 177-412 (414)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 3.5E-21 7.5E-26 163.7 21.1 113 10-128 8-133 (274)
50 PLN02872 triacylglycerol lipas 99.9 1.8E-21 3.9E-26 171.9 18.3 290 4-310 44-389 (395)
51 COG1647 Esterase/lipase [Gener 99.9 1.3E-21 2.8E-26 152.7 14.9 224 26-309 16-243 (243)
52 TIGR01838 PHA_synth_I poly(R)- 99.9 2.8E-21 6E-26 175.3 18.3 253 27-298 190-463 (532)
53 KOG1455 Lysophospholipase [Lip 99.9 4.3E-21 9.3E-26 157.1 17.5 121 6-127 29-162 (313)
54 COG0596 MhpC Predicted hydrola 99.9 2.2E-20 4.8E-25 156.5 22.0 115 10-128 6-122 (282)
55 PF00561 Abhydrolase_1: alpha/ 99.9 1.2E-23 2.6E-28 174.1 1.7 76 53-128 1-78 (230)
56 PRK11071 esterase YqiA; Provis 99.9 5.7E-21 1.2E-25 153.1 16.7 87 26-128 2-92 (190)
57 KOG2564 Predicted acetyltransf 99.9 1.3E-20 2.8E-25 151.7 15.7 102 23-127 73-180 (343)
58 PRK10566 esterase; Provisional 99.9 8.3E-20 1.8E-24 153.4 20.3 101 26-126 28-139 (249)
59 TIGR01836 PHA_synth_III_C poly 99.8 5.6E-20 1.2E-24 161.9 17.7 99 27-130 64-172 (350)
60 PRK07868 acyl-CoA synthetase; 99.8 1.6E-19 3.5E-24 178.3 18.0 103 23-129 66-177 (994)
61 PRK13604 luxD acyl transferase 99.8 1.9E-18 4.1E-23 145.4 16.1 116 7-126 12-138 (307)
62 TIGR03101 hydr2_PEP hydrolase, 99.8 1.5E-18 3.2E-23 145.1 15.4 100 26-127 26-132 (266)
63 KOG2565 Predicted hydrolases o 99.8 3.9E-18 8.4E-23 142.5 10.3 118 9-127 129-262 (469)
64 PF12695 Abhydrolase_5: Alpha/ 99.7 8.2E-17 1.8E-21 123.6 12.8 92 27-126 1-92 (145)
65 TIGR03230 lipo_lipase lipoprot 99.7 1.3E-16 2.9E-21 141.1 12.9 103 23-128 40-153 (442)
66 PRK11460 putative hydrolase; P 99.7 6.6E-16 1.4E-20 127.9 16.0 101 26-126 17-135 (232)
67 KOG4667 Predicted esterase [Li 99.7 8.2E-16 1.8E-20 119.6 15.0 222 20-307 29-255 (269)
68 PLN02442 S-formylglutathione h 99.7 1.8E-15 3.8E-20 129.1 17.8 117 12-128 28-177 (283)
69 TIGR02821 fghA_ester_D S-formy 99.7 4E-15 8.6E-20 126.7 19.0 103 26-128 43-172 (275)
70 COG2021 MET2 Homoserine acetyl 99.7 1.7E-15 3.7E-20 128.1 16.2 117 12-128 34-181 (368)
71 PLN00021 chlorophyllase 99.7 4E-15 8.8E-20 127.8 18.5 101 23-126 51-163 (313)
72 KOG2931 Differentiation-relate 99.7 3E-14 6.6E-19 116.1 21.4 269 6-309 24-305 (326)
73 cd00707 Pancreat_lipase_like P 99.6 3.7E-16 7.9E-21 132.4 8.4 113 13-128 24-146 (275)
74 PF03096 Ndr: Ndr family; Int 99.6 5.1E-15 1.1E-19 122.3 14.7 263 7-309 2-278 (283)
75 PF06342 DUF1057: Alpha/beta h 99.6 5.1E-15 1.1E-19 120.8 14.5 111 15-128 22-136 (297)
76 TIGR03502 lipase_Pla1_cef extr 99.6 2.4E-15 5.3E-20 140.9 12.7 110 6-115 420-576 (792)
77 COG3208 GrsT Predicted thioest 99.6 6.9E-14 1.5E-18 112.1 13.7 221 27-308 9-234 (244)
78 COG1506 DAP2 Dipeptidyl aminop 99.6 1.6E-13 3.6E-18 129.1 18.2 228 8-310 369-616 (620)
79 KOG1552 Predicted alpha/beta h 99.5 3.8E-13 8.2E-18 108.6 15.8 96 27-126 62-160 (258)
80 PF00326 Peptidase_S9: Prolyl 99.5 4E-14 8.7E-19 116.0 9.4 196 43-311 5-210 (213)
81 PF02230 Abhydrolase_2: Phosph 99.5 2.3E-13 4.9E-18 111.7 13.4 180 26-311 15-216 (216)
82 TIGR01839 PHA_synth_II poly(R) 99.5 1.1E-12 2.5E-17 118.4 17.2 98 27-129 217-328 (560)
83 COG0429 Predicted hydrolase of 99.5 2.9E-12 6.2E-17 107.0 17.7 244 27-309 77-339 (345)
84 KOG1838 Alpha/beta hydrolase [ 99.5 2.4E-11 5.2E-16 105.2 21.3 267 5-309 94-387 (409)
85 PF12146 Hydrolase_4: Putative 99.5 6.3E-13 1.4E-17 89.9 9.1 76 13-89 1-79 (79)
86 TIGR01840 esterase_phb esteras 99.4 1.3E-12 2.9E-17 106.8 11.7 102 26-127 14-128 (212)
87 PRK10162 acetyl esterase; Prov 99.4 2.9E-11 6.3E-16 105.0 19.8 100 26-127 82-193 (318)
88 TIGR00976 /NonD putative hydro 99.4 9.2E-13 2E-17 122.7 10.5 113 12-127 5-130 (550)
89 KOG4391 Predicted alpha/beta h 99.4 3.4E-12 7.3E-17 99.7 11.3 114 12-127 63-182 (300)
90 PF01738 DLH: Dienelactone hyd 99.4 1.5E-12 3.3E-17 107.1 7.7 179 27-310 16-217 (218)
91 TIGR01849 PHB_depoly_PhaZ poly 99.4 3.9E-11 8.6E-16 105.4 16.3 102 26-131 103-210 (406)
92 PF00975 Thioesterase: Thioest 99.3 6.6E-11 1.4E-15 98.0 11.8 97 27-128 2-103 (229)
93 PF06821 Ser_hydrolase: Serine 99.3 5.1E-11 1.1E-15 93.4 10.2 88 28-128 1-90 (171)
94 COG0412 Dienelactone hydrolase 99.3 6.6E-10 1.4E-14 91.9 17.4 99 26-125 28-142 (236)
95 PLN02733 phosphatidylcholine-s 99.3 4.5E-11 9.7E-16 106.8 11.0 122 6-130 70-202 (440)
96 PF07819 PGAP1: PGAP1-like pro 99.2 1.2E-10 2.6E-15 95.6 12.3 101 23-129 3-123 (225)
97 PRK10252 entF enterobactin syn 99.2 7.7E-11 1.7E-15 121.0 11.7 101 21-127 1065-1169(1296)
98 PF05448 AXE1: Acetyl xylan es 99.2 8.9E-10 1.9E-14 95.1 16.0 114 11-126 64-206 (320)
99 COG0400 Predicted esterase [Ge 99.2 2.4E-10 5.2E-15 91.7 11.4 97 27-126 20-131 (207)
100 COG3571 Predicted hydrolase of 99.1 3.7E-09 8E-14 78.9 14.6 102 27-129 16-124 (213)
101 PRK10115 protease 2; Provision 99.1 1.9E-08 4E-13 95.9 20.0 114 12-126 425-556 (686)
102 PF05728 UPF0227: Uncharacteri 99.1 2.7E-08 5.9E-13 78.9 17.7 84 28-127 2-89 (187)
103 COG2945 Predicted hydrolase of 99.0 1.9E-08 4.1E-13 77.7 15.2 88 27-117 30-126 (210)
104 COG3243 PhaC Poly(3-hydroxyalk 99.0 3.1E-09 6.6E-14 91.8 10.7 104 26-129 108-217 (445)
105 PF12740 Chlorophyllase2: Chlo 99.0 3.1E-09 6.7E-14 87.5 10.2 100 26-127 18-129 (259)
106 PF02273 Acyl_transf_2: Acyl t 99.0 8.5E-08 1.8E-12 76.9 17.6 115 7-125 5-130 (294)
107 PF01674 Lipase_2: Lipase (cla 99.0 2.4E-09 5.2E-14 86.8 7.8 88 27-115 3-96 (219)
108 PF10230 DUF2305: Uncharacteri 99.0 1.1E-08 2.4E-13 86.3 12.2 100 27-126 4-119 (266)
109 COG3319 Thioesterase domains o 98.9 1.6E-08 3.5E-13 83.7 11.8 100 26-130 1-104 (257)
110 PF06500 DUF1100: Alpha/beta h 98.9 7.3E-09 1.6E-13 90.6 10.0 118 9-128 170-295 (411)
111 PF08538 DUF1749: Protein of u 98.9 1E-08 2.3E-13 86.0 10.5 94 25-127 33-146 (303)
112 PF06028 DUF915: Alpha/beta hy 98.9 7.9E-09 1.7E-13 85.9 8.1 104 27-130 13-144 (255)
113 COG3458 Acetyl esterase (deace 98.8 9.7E-08 2.1E-12 77.7 13.0 113 11-125 64-206 (321)
114 COG4757 Predicted alpha/beta h 98.8 6E-08 1.3E-12 77.1 11.0 114 11-126 13-135 (281)
115 PF07224 Chlorophyllase: Chlor 98.8 3.8E-08 8.2E-13 79.8 8.2 99 26-127 47-155 (307)
116 PRK05371 x-prolyl-dipeptidyl a 98.8 2.2E-07 4.7E-12 89.4 14.6 80 45-127 272-371 (767)
117 PF09752 DUF2048: Uncharacteri 98.7 1.1E-06 2.4E-11 75.1 17.3 237 27-308 94-347 (348)
118 PTZ00472 serine carboxypeptida 98.7 1.2E-07 2.7E-12 86.1 11.3 119 7-126 50-213 (462)
119 PF05057 DUF676: Putative seri 98.7 6.1E-08 1.3E-12 79.4 8.5 83 26-111 5-95 (217)
120 PF00151 Lipase: Lipase; Inte 98.7 1.4E-08 3E-13 88.0 4.7 101 26-128 72-186 (331)
121 PF03959 FSH1: Serine hydrolas 98.7 6.4E-08 1.4E-12 79.0 7.4 87 27-114 6-122 (212)
122 smart00824 PKS_TE Thioesterase 98.7 2.3E-07 5E-12 75.3 10.2 93 30-127 2-100 (212)
123 PF08840 BAAT_C: BAAT / Acyl-C 98.6 9.2E-08 2E-12 78.1 6.7 49 79-128 4-55 (213)
124 COG1075 LipA Predicted acetylt 98.6 2.9E-07 6.3E-12 80.3 8.8 98 27-128 61-163 (336)
125 PF10503 Esterase_phd: Esteras 98.5 1.1E-06 2.4E-11 71.5 11.0 102 26-127 17-130 (220)
126 PF12715 Abhydrolase_7: Abhydr 98.5 7.2E-07 1.6E-11 77.0 10.0 100 26-126 116-257 (390)
127 PF02129 Peptidase_S15: X-Pro 98.5 1.3E-06 2.9E-11 74.3 11.6 113 12-127 1-134 (272)
128 KOG2624 Triglyceride lipase-ch 98.5 4.2E-07 9.2E-12 80.1 7.9 124 4-128 48-198 (403)
129 KOG1515 Arylacetamide deacetyl 98.5 4.5E-05 9.7E-10 66.0 19.9 98 26-128 91-206 (336)
130 COG3509 LpqC Poly(3-hydroxybut 98.5 2.3E-06 5E-11 70.9 11.2 119 6-127 37-177 (312)
131 KOG4627 Kynurenine formamidase 98.5 1.2E-06 2.5E-11 68.6 8.8 101 18-127 58-170 (270)
132 PF05990 DUF900: Alpha/beta hy 98.4 1.1E-06 2.5E-11 72.6 8.9 102 23-126 17-134 (233)
133 KOG2112 Lysophospholipase [Lip 98.4 3.5E-06 7.7E-11 66.4 10.4 98 27-124 5-123 (206)
134 KOG2100 Dipeptidyl aminopeptid 98.4 2.8E-05 6.1E-10 74.9 17.8 121 4-126 498-641 (755)
135 COG4814 Uncharacterized protei 98.4 3.3E-06 7.3E-11 68.2 9.6 103 27-130 47-177 (288)
136 KOG3043 Predicted hydrolase re 98.4 3.4E-06 7.4E-11 67.0 9.5 67 242-310 162-240 (242)
137 KOG1553 Predicted alpha/beta h 98.4 2.1E-06 4.6E-11 72.3 8.5 99 23-126 241-342 (517)
138 KOG2551 Phospholipase/carboxyh 98.3 1.7E-05 3.8E-10 63.1 12.9 58 242-308 161-218 (230)
139 PF05677 DUF818: Chlamydia CHL 98.3 1.7E-05 3.6E-10 67.4 12.9 102 8-115 116-236 (365)
140 PF07859 Abhydrolase_3: alpha/ 98.3 1.7E-06 3.7E-11 70.6 7.0 95 28-127 1-108 (211)
141 PF11339 DUF3141: Protein of u 98.3 9.9E-05 2.2E-09 66.0 17.9 203 45-263 93-316 (581)
142 PF03403 PAF-AH_p_II: Platelet 98.2 2.1E-06 4.5E-11 76.1 6.0 101 26-127 101-260 (379)
143 COG0657 Aes Esterase/lipase [L 98.2 0.00062 1.3E-08 59.1 20.4 96 26-126 80-188 (312)
144 PF00756 Esterase: Putative es 98.2 4.5E-06 9.8E-11 70.0 6.7 102 26-127 25-148 (251)
145 PLN02606 palmitoyl-protein thi 98.1 1.6E-05 3.4E-10 67.0 9.2 97 26-128 27-131 (306)
146 PF03583 LIP: Secretory lipase 98.1 3.4E-05 7.5E-10 66.0 11.3 49 242-292 217-266 (290)
147 COG3545 Predicted esterase of 98.1 2.4E-05 5.1E-10 60.0 9.0 89 27-128 4-93 (181)
148 PRK10439 enterobactin/ferric e 98.1 2.8E-05 6.1E-10 69.7 10.9 100 26-127 210-321 (411)
149 COG4188 Predicted dienelactone 98.1 9.2E-06 2E-10 69.8 6.7 92 26-117 72-182 (365)
150 KOG2281 Dipeptidyl aminopeptid 98.0 0.00024 5.1E-09 65.0 15.1 99 26-124 643-757 (867)
151 PRK04940 hypothetical protein; 98.0 2.2E-05 4.7E-10 61.3 7.2 83 28-127 2-90 (180)
152 PLN02633 palmitoyl protein thi 98.0 4E-05 8.7E-10 64.6 8.6 94 27-128 27-130 (314)
153 PF06057 VirJ: Bacterial virul 97.9 6.7E-05 1.4E-09 58.8 8.5 93 27-127 4-105 (192)
154 PF02089 Palm_thioest: Palmito 97.8 3.2E-05 7E-10 64.6 4.9 101 26-128 6-115 (279)
155 PF05577 Peptidase_S28: Serine 97.8 0.0003 6.6E-09 64.0 11.2 103 27-129 30-148 (434)
156 COG4782 Uncharacterized protei 97.8 0.00015 3.3E-09 62.1 8.4 86 27-112 118-209 (377)
157 PF02450 LCAT: Lecithin:choles 97.7 0.00043 9.3E-09 61.9 11.4 109 11-130 37-161 (389)
158 KOG2541 Palmitoyl protein thio 97.7 0.00038 8.3E-09 57.1 9.9 94 27-128 25-127 (296)
159 KOG3975 Uncharacterized conser 97.7 0.0016 3.5E-08 52.9 12.5 122 4-125 1-143 (301)
160 COG4099 Predicted peptidase [G 97.7 0.00042 9.2E-09 57.7 9.3 98 26-127 192-302 (387)
161 KOG3253 Predicted alpha/beta h 97.6 0.00072 1.6E-08 61.5 11.2 91 27-126 178-283 (784)
162 PF08386 Abhydrolase_4: TAP-li 97.6 8E-05 1.7E-09 53.2 3.8 60 244-309 34-93 (103)
163 KOG3724 Negative regulator of 97.6 0.00045 9.8E-09 64.6 9.2 99 24-128 89-219 (973)
164 cd00741 Lipase Lipase. Lipase 97.5 0.00022 4.7E-09 55.0 5.9 52 77-128 7-66 (153)
165 cd00312 Esterase_lipase Estera 97.5 0.00027 5.9E-09 65.5 6.9 101 26-128 96-212 (493)
166 COG0627 Predicted esterase [Ge 97.4 0.00057 1.2E-08 58.9 7.9 53 75-127 127-185 (316)
167 PF10142 PhoPQ_related: PhoPQ- 97.4 0.0044 9.6E-08 54.4 13.3 59 242-309 260-319 (367)
168 PF00450 Peptidase_S10: Serine 97.4 0.0012 2.5E-08 59.8 10.2 121 6-127 13-179 (415)
169 COG3150 Predicted esterase [Ge 97.4 0.0013 2.9E-08 50.1 8.6 85 28-123 2-86 (191)
170 PF06441 EHN: Epoxide hydrolas 97.4 0.0005 1.1E-08 49.6 6.0 40 5-44 69-111 (112)
171 PF12048 DUF3530: Protein of u 97.4 0.012 2.7E-07 50.9 15.6 100 27-127 89-227 (310)
172 PF01764 Lipase_3: Lipase (cla 97.2 0.00052 1.1E-08 51.9 4.9 38 78-115 48-85 (140)
173 COG2936 Predicted acyl esteras 97.2 0.0015 3.3E-08 59.8 8.5 117 8-126 23-156 (563)
174 KOG3847 Phospholipase A2 (plat 97.2 0.0005 1.1E-08 57.7 4.8 40 26-65 119-158 (399)
175 PF05705 DUF829: Eukaryotic pr 97.1 0.03 6.6E-07 46.6 14.6 64 242-307 176-240 (240)
176 KOG2183 Prolylcarboxypeptidase 97.1 0.0033 7.2E-08 54.9 8.7 99 27-128 82-201 (492)
177 KOG3101 Esterase D [General fu 97.0 0.00084 1.8E-08 53.1 3.9 102 26-127 45-174 (283)
178 PLN03016 sinapoylglucose-malat 97.0 0.0066 1.4E-07 55.0 9.8 122 6-127 39-208 (433)
179 KOG4372 Predicted alpha/beta h 96.9 0.0015 3.3E-08 56.9 5.0 84 26-110 81-166 (405)
180 KOG4840 Predicted hydrolases o 96.9 0.0057 1.2E-07 48.9 7.6 95 27-126 38-141 (299)
181 KOG1551 Uncharacterized conser 96.8 0.016 3.5E-07 47.7 9.8 56 247-309 309-365 (371)
182 PLN02209 serine carboxypeptida 96.8 0.016 3.5E-07 52.5 10.9 121 7-127 42-210 (437)
183 KOG3967 Uncharacterized conser 96.7 0.031 6.7E-07 44.6 10.1 102 27-128 103-226 (297)
184 KOG2369 Lecithin:cholesterol a 96.7 0.0026 5.7E-08 56.5 4.7 87 39-129 124-225 (473)
185 PF04083 Abhydro_lipase: Parti 96.7 0.0053 1.1E-07 39.2 4.9 37 5-41 13-59 (63)
186 PLN02517 phosphatidylcholine-s 96.6 0.0067 1.5E-07 55.9 7.3 88 40-129 157-263 (642)
187 PF11187 DUF2974: Protein of u 96.6 0.034 7.3E-07 45.7 10.8 49 79-128 70-122 (224)
188 PF06259 Abhydrolase_8: Alpha/ 96.6 0.0065 1.4E-07 47.7 6.1 54 76-129 86-144 (177)
189 cd00519 Lipase_3 Lipase (class 96.5 0.0046 1E-07 51.1 5.4 24 92-115 126-149 (229)
190 PLN02162 triacylglycerol lipas 96.5 0.0071 1.5E-07 54.2 6.1 54 76-129 260-321 (475)
191 PF10340 DUF2424: Protein of u 96.4 0.035 7.7E-07 48.7 9.7 100 25-126 122-232 (374)
192 KOG2182 Hydrolytic enzymes of 96.3 0.045 9.7E-07 49.2 10.0 78 51-128 117-206 (514)
193 PLN00413 triacylglycerol lipas 96.2 0.014 3.1E-07 52.4 6.4 53 77-129 267-327 (479)
194 COG2819 Predicted hydrolase of 96.0 0.014 3.1E-07 48.4 5.2 46 83-128 123-171 (264)
195 PTZ00472 serine carboxypeptida 96.0 0.01 2.3E-07 54.3 4.9 66 244-309 364-458 (462)
196 PF05277 DUF726: Protein of un 95.8 0.022 4.8E-07 49.6 5.8 39 91-129 217-260 (345)
197 COG2939 Carboxypeptidase C (ca 95.7 0.046 9.9E-07 49.4 7.4 89 26-115 102-219 (498)
198 PLN02571 triacylglycerol lipas 95.5 0.019 4.2E-07 51.0 4.6 37 78-114 208-246 (413)
199 PF05576 Peptidase_S37: PS-10 95.5 0.029 6.2E-07 49.4 5.3 100 27-128 65-168 (448)
200 PF11144 DUF2920: Protein of u 95.4 0.13 2.8E-06 45.5 9.2 30 95-124 185-214 (403)
201 PLN02454 triacylglycerol lipas 95.4 0.023 5E-07 50.4 4.7 32 83-114 215-248 (414)
202 PLN02213 sinapoylglucose-malat 95.4 0.067 1.4E-06 46.6 7.5 65 244-309 233-316 (319)
203 PLN02934 triacylglycerol lipas 95.4 0.052 1.1E-06 49.3 6.7 38 76-113 303-340 (515)
204 COG3946 VirJ Type IV secretory 95.3 0.11 2.3E-06 45.7 8.2 75 28-109 263-341 (456)
205 PF00135 COesterase: Carboxyle 95.3 0.05 1.1E-06 50.9 6.9 101 26-127 126-243 (535)
206 PF07082 DUF1350: Protein of u 95.0 0.1 2.2E-06 43.0 6.9 83 40-126 35-122 (250)
207 PLN02408 phospholipase A1 95.0 0.039 8.5E-07 48.3 4.7 35 80-114 184-220 (365)
208 PLN02310 triacylglycerol lipas 95.0 0.062 1.3E-06 47.7 6.0 51 79-129 190-248 (405)
209 PF01083 Cutinase: Cutinase; 94.8 0.058 1.3E-06 42.7 4.9 53 76-128 59-121 (179)
210 PF04301 DUF452: Protein of un 94.7 0.15 3.2E-06 41.4 6.9 75 26-126 12-87 (213)
211 COG2272 PnbA Carboxylesterase 94.6 0.21 4.5E-06 45.2 8.2 99 26-128 95-216 (491)
212 PF00450 Peptidase_S10: Serine 94.5 0.039 8.5E-07 49.9 3.7 65 244-308 330-414 (415)
213 KOG1282 Serine carboxypeptidas 94.3 0.48 1E-05 43.0 10.1 119 7-126 47-210 (454)
214 PLN02324 triacylglycerol lipas 94.2 0.069 1.5E-06 47.5 4.5 35 80-114 199-235 (415)
215 KOG1202 Animal-type fatty acid 94.2 0.23 5E-06 49.6 8.1 93 23-127 2122-2217(2376)
216 PLN02753 triacylglycerol lipas 94.0 0.078 1.7E-06 48.4 4.4 35 80-114 293-332 (531)
217 PLN03037 lipase class 3 family 93.8 0.086 1.9E-06 48.1 4.4 36 79-114 299-338 (525)
218 PLN02213 sinapoylglucose-malat 93.8 0.17 3.7E-06 44.1 6.1 74 53-126 2-93 (319)
219 PLN02802 triacylglycerol lipas 93.7 0.1 2.2E-06 47.5 4.6 35 80-114 314-350 (509)
220 PLN02719 triacylglycerol lipas 93.5 0.11 2.3E-06 47.4 4.4 35 80-114 279-318 (518)
221 PLN02761 lipase class 3 family 93.1 0.14 3E-06 46.8 4.4 34 80-113 274-313 (527)
222 PLN02209 serine carboxypeptida 92.9 0.24 5.2E-06 45.1 5.7 65 244-309 351-434 (437)
223 PLN03016 sinapoylglucose-malat 92.7 0.32 6.9E-06 44.2 6.3 65 244-309 347-430 (433)
224 KOG1516 Carboxylesterase and r 92.7 0.43 9.4E-06 44.9 7.5 102 26-127 113-230 (545)
225 COG2382 Fes Enterochelin ester 92.6 0.11 2.3E-06 44.0 2.9 108 15-127 84-210 (299)
226 COG1505 Serine proteases of th 92.6 1.9 4.2E-05 40.1 10.9 114 12-125 403-531 (648)
227 PLN02847 triacylglycerol lipas 92.2 0.25 5.4E-06 45.9 5.0 20 95-114 252-271 (633)
228 COG1073 Hydrolases of the alph 92.2 0.29 6.2E-06 41.5 5.2 61 245-310 233-297 (299)
229 KOG4569 Predicted lipase [Lipi 91.7 0.26 5.6E-06 43.2 4.4 37 78-114 155-191 (336)
230 PF08237 PE-PPE: PE-PPE domain 91.3 1.8 3.8E-05 35.6 8.6 78 52-129 2-89 (225)
231 PF11288 DUF3089: Protein of u 91.0 0.53 1.2E-05 37.9 5.2 64 52-115 45-116 (207)
232 KOG1283 Serine carboxypeptidas 90.6 1.3 2.7E-05 38.0 7.1 107 8-115 7-143 (414)
233 KOG2029 Uncharacterized conser 89.9 0.85 1.8E-05 42.3 6.0 48 81-128 510-571 (697)
234 KOG1282 Serine carboxypeptidas 89.9 0.81 1.8E-05 41.6 5.9 65 245-309 364-447 (454)
235 COG4287 PqaA PhoPQ-activated p 89.6 2.5 5.4E-05 37.0 8.2 58 242-308 327-385 (507)
236 PF06850 PHB_depo_C: PHB de-po 86.4 0.64 1.4E-05 36.8 2.6 64 244-310 134-202 (202)
237 COG4947 Uncharacterized protei 85.9 2.1 4.6E-05 33.2 5.1 113 13-129 14-136 (227)
238 COG5153 CVT17 Putative lipase 82.8 3.1 6.7E-05 35.1 5.2 25 92-116 274-298 (425)
239 KOG4540 Putative lipase essent 82.8 3.1 6.7E-05 35.1 5.2 25 92-116 274-298 (425)
240 PF09949 DUF2183: Uncharacteri 82.8 14 0.00031 26.0 9.7 83 41-124 13-97 (100)
241 KOG2385 Uncharacterized conser 81.5 5.1 0.00011 36.7 6.4 39 91-129 444-487 (633)
242 COG4553 DepA Poly-beta-hydroxy 81.4 23 0.0005 30.3 9.7 100 27-130 105-210 (415)
243 cd01714 ETF_beta The electron 80.6 12 0.00027 30.1 8.0 60 54-123 79-143 (202)
244 COG2830 Uncharacterized protei 80.0 5 0.00011 30.8 5.0 79 23-127 9-88 (214)
245 KOG2237 Predicted serine prote 79.4 2 4.2E-05 40.4 3.2 99 27-125 472-580 (712)
246 PF07519 Tannase: Tannase and 79.2 4.2 9.2E-05 37.6 5.4 78 49-127 56-148 (474)
247 COG1770 PtrB Protease II [Amin 77.8 9.7 0.00021 36.1 7.2 101 23-125 447-558 (682)
248 PRK11613 folP dihydropteroate 77.2 18 0.00039 30.9 8.2 74 27-109 135-226 (282)
249 PF07859 Abhydrolase_3: alpha/ 76.4 1.4 3E-05 35.5 1.3 45 244-292 166-210 (211)
250 cd07225 Pat_PNPLA6_PNPLA7 Pata 75.1 3.5 7.6E-05 35.7 3.5 33 84-116 33-65 (306)
251 PF00698 Acyl_transf_1: Acyl t 75.1 1.9 4.2E-05 37.5 1.9 31 83-113 73-103 (318)
252 smart00827 PKS_AT Acyl transfe 74.9 3.2 6.9E-05 35.6 3.3 30 84-113 72-101 (298)
253 COG4188 Predicted dienelactone 72.4 3.5 7.6E-05 36.2 2.8 54 241-299 248-303 (365)
254 COG1752 RssA Predicted esteras 72.3 4.1 8.8E-05 35.3 3.3 33 84-116 29-61 (306)
255 PRK10279 hypothetical protein; 71.7 4.3 9.2E-05 35.0 3.2 34 84-117 23-56 (300)
256 PF06057 VirJ: Bacterial virul 71.3 17 0.00036 29.0 6.1 53 244-309 139-191 (192)
257 TIGR03131 malonate_mdcH malona 71.2 4.1 9E-05 34.9 3.1 30 84-113 66-95 (295)
258 cd07227 Pat_Fungal_NTE1 Fungal 70.4 5.2 0.00011 33.9 3.4 32 84-115 28-59 (269)
259 TIGR00128 fabD malonyl CoA-acy 69.2 4.7 0.0001 34.3 3.0 32 84-115 72-104 (290)
260 cd07198 Patatin Patatin-like p 69.0 5.8 0.00013 30.9 3.3 33 84-116 16-48 (172)
261 PRK12467 peptide synthase; Pro 68.4 23 0.0005 42.1 8.8 95 27-126 3694-3792(3956)
262 cd07210 Pat_hypo_W_succinogene 67.9 6.7 0.00015 32.1 3.5 33 84-116 18-50 (221)
263 COG0218 Predicted GTPase [Gene 66.8 8.9 0.00019 30.7 3.8 15 55-69 72-86 (200)
264 PF11713 Peptidase_C80: Peptid 66.1 4.6 0.0001 31.1 2.1 50 57-106 58-116 (157)
265 cd07207 Pat_ExoU_VipD_like Exo 65.8 7.2 0.00016 31.0 3.2 33 84-116 17-49 (194)
266 PF07519 Tannase: Tannase and 60.5 15 0.00032 34.0 4.6 64 246-309 355-426 (474)
267 COG1576 Uncharacterized conser 59.0 28 0.00061 26.6 5.0 48 51-110 66-114 (155)
268 PF10605 3HBOH: 3HB-oligomer h 57.8 12 0.00026 35.2 3.5 51 242-292 552-605 (690)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 57.8 12 0.00026 30.5 3.2 33 84-116 16-48 (215)
270 cd07228 Pat_NTE_like_bacteria 57.7 12 0.00025 29.3 3.1 34 84-117 18-51 (175)
271 PRK07451 translation initiatio 56.8 73 0.0016 23.1 7.4 73 15-100 41-114 (115)
272 PF03610 EIIA-man: PTS system 56.6 71 0.0015 22.9 8.4 74 27-113 2-76 (116)
273 COG1073 Hydrolases of the alph 55.9 24 0.00052 29.5 5.0 96 27-126 51-166 (299)
274 TIGR02816 pfaB_fam PfaB family 55.9 11 0.00023 35.5 2.9 32 84-115 254-286 (538)
275 COG2939 Carboxypeptidase C (ca 53.6 31 0.00068 31.8 5.3 66 243-309 424-490 (498)
276 cd00006 PTS_IIA_man PTS_IIA, P 53.1 85 0.0018 22.7 7.8 72 27-111 3-75 (122)
277 TIGR02764 spore_ybaN_pdaB poly 52.2 15 0.00033 29.1 3.0 33 27-59 153-188 (191)
278 PF09994 DUF2235: Uncharacteri 51.8 90 0.0019 26.6 7.7 61 54-114 37-112 (277)
279 cd07205 Pat_PNPLA6_PNPLA7_NTE1 51.8 20 0.00043 27.9 3.5 32 84-115 18-49 (175)
280 PF00975 Thioesterase: Thioest 51.4 35 0.00076 27.6 5.1 60 244-307 168-229 (229)
281 COG3933 Transcriptional antite 50.8 1.5E+02 0.0032 27.2 8.8 72 27-111 111-182 (470)
282 cd07230 Pat_TGL4-5_like Triacy 50.6 7.4 0.00016 35.4 1.0 39 84-122 91-129 (421)
283 cd07229 Pat_TGL3_like Triacylg 49.8 7.5 0.00016 34.8 0.9 40 84-123 101-140 (391)
284 PF02590 SPOUT_MTase: Predicte 49.8 41 0.00088 25.9 4.8 45 51-106 66-111 (155)
285 KOG4388 Hormone-sensitive lipa 49.3 49 0.0011 31.3 5.8 84 27-114 398-489 (880)
286 TIGR00246 tRNA_RlmH_YbeA rRNA 49.1 41 0.0009 25.8 4.7 43 53-106 66-108 (153)
287 COG3887 Predicted signaling pr 48.5 30 0.00066 32.6 4.5 49 76-127 322-376 (655)
288 TIGR03712 acc_sec_asp2 accesso 48.4 1.3E+02 0.0028 28.0 8.2 103 9-116 271-380 (511)
289 PRK06824 translation initiatio 47.9 1.1E+02 0.0023 22.4 7.1 74 14-100 43-117 (118)
290 COG3727 Vsr DNA G:T-mismatch r 46.2 95 0.0021 23.1 5.8 8 27-34 59-66 (150)
291 PF06342 DUF1057: Alpha/beta h 46.1 29 0.00063 29.6 3.7 65 243-307 211-296 (297)
292 COG3545 Predicted esterase of 45.6 13 0.00029 29.1 1.5 44 242-292 115-158 (181)
293 PRK09019 translation initiatio 45.4 1.1E+02 0.0024 21.9 7.1 74 14-100 33-107 (108)
294 COG4822 CbiK Cobalamin biosynt 45.0 1.2E+02 0.0026 24.7 6.7 58 27-99 140-199 (265)
295 cd07231 Pat_SDP1-like Sugar-De 44.9 10 0.00022 32.9 0.9 37 84-120 86-122 (323)
296 cd07212 Pat_PNPLA9 Patatin-lik 44.7 36 0.00079 29.6 4.3 33 84-116 17-54 (312)
297 cd07208 Pat_hypo_Ecoli_yjju_li 44.2 29 0.00062 29.2 3.6 35 84-118 16-51 (266)
298 PF06500 DUF1100: Alpha/beta h 43.5 20 0.00043 32.3 2.5 60 241-309 349-408 (411)
299 TIGR02884 spore_pdaA delta-lac 43.2 34 0.00073 28.0 3.7 33 27-59 188-221 (224)
300 PF05576 Peptidase_S37: PS-10 43.1 76 0.0016 28.7 5.9 54 246-307 353-411 (448)
301 cd07222 Pat_PNPLA4 Patatin-lik 42.2 24 0.00051 29.5 2.7 35 84-119 17-55 (246)
302 PRK00103 rRNA large subunit me 41.7 71 0.0015 24.6 5.0 44 52-106 67-111 (157)
303 TIGR02873 spore_ylxY probable 41.3 38 0.00083 28.7 3.8 33 27-59 232-264 (268)
304 PRK14974 cell division protein 41.2 2.4E+02 0.0051 24.9 8.8 66 50-125 220-287 (336)
305 cd07224 Pat_like Patatin-like 40.8 33 0.00071 28.4 3.3 33 84-116 17-51 (233)
306 cd07232 Pat_PLPL Patain-like p 40.5 11 0.00023 34.1 0.4 40 84-123 85-124 (407)
307 cd07204 Pat_PNPLA_like Patatin 40.4 37 0.0008 28.3 3.6 35 84-118 17-56 (243)
308 TIGR01496 DHPS dihydropteroate 40.2 1.7E+02 0.0038 24.5 7.6 73 27-108 120-210 (257)
309 PF00448 SRP54: SRP54-type pro 40.0 1.5E+02 0.0032 23.7 6.9 72 44-125 75-148 (196)
310 COG0482 TrmU Predicted tRNA(5- 38.8 1.1E+02 0.0023 27.2 6.1 64 27-99 6-69 (356)
311 PF05577 Peptidase_S28: Serine 37.4 53 0.0012 29.9 4.5 40 246-294 378-417 (434)
312 PRK10319 N-acetylmuramoyl-l-al 36.1 82 0.0018 27.0 5.0 41 52-93 55-100 (287)
313 PF06028 DUF915: Alpha/beta hy 35.9 49 0.0011 27.8 3.6 63 243-308 183-253 (255)
314 PF06289 FlbD: Flagellar prote 34.7 66 0.0014 20.3 3.1 34 275-309 24-57 (60)
315 TIGR02883 spore_cwlD N-acetylm 33.1 94 0.002 24.6 4.7 44 54-99 1-49 (189)
316 PF14253 AbiH: Bacteriophage a 32.8 28 0.0006 29.3 1.7 15 92-106 233-247 (270)
317 PRK05309 30S ribosomal protein 32.7 2E+02 0.0044 21.3 6.0 50 73-122 58-109 (128)
318 PRK13753 dihydropteroate synth 32.6 1.4E+02 0.0031 25.5 5.9 58 47-111 159-219 (279)
319 KOG2521 Uncharacterized conser 32.4 3E+02 0.0065 24.4 7.9 101 27-128 40-151 (350)
320 cd02696 MurNAc-LAA N-acetylmur 32.4 87 0.0019 24.1 4.4 44 56-101 2-50 (172)
321 KOG0549 FKBP-type peptidyl-pro 32.2 1.5E+02 0.0033 23.4 5.4 53 16-69 104-157 (188)
322 cd03818 GT1_ExpC_like This fam 32.0 3.7E+02 0.0079 23.9 10.1 37 28-67 2-39 (396)
323 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.8 41 0.0009 29.0 2.6 36 84-119 87-122 (298)
324 CHL00041 rps11 ribosomal prote 31.8 2E+02 0.0044 20.8 6.2 50 73-122 54-105 (116)
325 COG0331 FabD (acyl-carrier-pro 31.7 45 0.00097 29.0 2.8 28 86-113 75-104 (310)
326 cd07218 Pat_iPLA2 Calcium-inde 31.3 56 0.0012 27.3 3.2 20 97-116 33-52 (245)
327 TIGR01425 SRP54_euk signal rec 31.2 3.2E+02 0.007 25.0 8.2 69 47-125 177-247 (429)
328 cd07221 Pat_PNPLA3 Patatin-lik 29.8 66 0.0014 27.0 3.4 21 96-116 34-54 (252)
329 PRK15180 Vi polysaccharide bio 29.1 1.9E+02 0.004 27.0 6.1 76 27-102 98-197 (831)
330 PF07643 DUF1598: Protein of u 29.0 1.3E+02 0.0029 20.3 4.0 33 83-115 32-65 (84)
331 TIGR02683 upstrm_HI1419 probab 28.5 96 0.0021 21.4 3.6 26 9-36 52-78 (95)
332 cd07211 Pat_PNPLA8 Patatin-lik 28.4 59 0.0013 28.1 3.1 51 51-113 6-60 (308)
333 TIGR01840 esterase_phb esteras 28.1 41 0.00089 27.0 1.9 24 243-266 167-190 (212)
334 KOG3975 Uncharacterized conser 27.9 81 0.0018 26.5 3.5 57 244-307 242-300 (301)
335 PF13207 AAA_17: AAA domain; P 27.9 1.2E+02 0.0025 21.5 4.2 61 28-91 1-64 (121)
336 PF04084 ORC2: Origin recognit 27.8 3.7E+02 0.008 23.6 7.8 32 76-107 118-150 (326)
337 PF02129 Peptidase_S15: X-Pro 27.8 41 0.00088 28.4 1.9 19 241-259 225-243 (272)
338 cd01853 Toc34_like Toc34-like 27.8 1E+02 0.0023 25.7 4.3 16 52-67 78-93 (249)
339 cd02651 nuc_hydro_IU_UC_XIUA n 27.6 2.2E+02 0.0048 24.5 6.4 49 78-129 99-151 (302)
340 cd07220 Pat_PNPLA2 Patatin-lik 27.2 77 0.0017 26.5 3.4 21 96-116 38-58 (249)
341 PF03490 Varsurf_PPLC: Variant 26.8 71 0.0015 19.1 2.2 28 74-101 5-32 (51)
342 PF12242 Eno-Rase_NADH_b: NAD( 26.6 1.5E+02 0.0033 19.7 3.9 43 74-116 16-62 (78)
343 TIGR03632 bact_S11 30S ribosom 26.5 2.4E+02 0.0053 20.1 6.1 50 73-122 41-92 (108)
344 cd01819 Patatin_and_cPLA2 Pata 26.4 80 0.0017 24.0 3.2 29 84-112 16-46 (155)
345 PRK04940 hypothetical protein; 26.2 1.1E+02 0.0024 24.2 3.9 51 247-309 127-179 (180)
346 COG4553 DepA Poly-beta-hydroxy 26.1 50 0.0011 28.3 2.0 63 244-309 339-406 (415)
347 cd00739 DHPS DHPS subgroup of 26.0 4E+02 0.0086 22.4 7.8 74 27-109 122-213 (257)
348 TIGR00959 ffh signal recogniti 25.8 4.2E+02 0.009 24.3 8.0 69 47-125 177-247 (428)
349 TIGR01158 SUI1_rel translation 25.7 2.4E+02 0.0053 19.8 6.6 73 14-99 26-99 (101)
350 PF03681 UPF0150: Uncharacteri 25.1 53 0.0012 19.2 1.5 32 51-89 12-43 (48)
351 PRK05481 lipoyl synthase; Prov 25.1 2.1E+02 0.0044 24.6 5.7 56 37-103 178-235 (289)
352 cd01311 PDC_hydrolase 2-pyrone 24.6 1.9E+02 0.0041 24.2 5.4 46 81-126 30-77 (263)
353 PF15566 Imm18: Immunity prote 24.4 1.1E+02 0.0023 18.7 2.7 31 76-106 3-33 (52)
354 TIGR02260 benz_CoA_red_B benzo 24.3 5.5E+02 0.012 23.4 9.4 37 27-64 268-304 (413)
355 COG1582 FlgEa Uncharacterized 24.2 1.4E+02 0.003 19.0 3.2 35 274-309 23-57 (67)
356 cd01985 ETF The electron trans 24.1 2.5E+02 0.0055 21.8 5.7 52 54-115 62-114 (181)
357 PRK02628 nadE NAD synthetase; 23.8 2.9E+02 0.0063 27.1 7.0 57 27-94 364-423 (679)
358 TIGR02364 dha_pts dihydroxyace 23.5 2.5E+02 0.0053 20.7 5.1 90 27-128 3-96 (125)
359 cd06583 PGRP Peptidoglycan rec 23.4 1.2E+02 0.0026 21.7 3.6 51 52-105 66-117 (126)
360 PF06309 Torsin: Torsin; Inte 23.4 60 0.0013 24.0 1.8 17 27-43 54-70 (127)
361 COG0541 Ffh Signal recognition 23.2 5.6E+02 0.012 23.6 8.0 70 46-125 176-247 (451)
362 PRK10431 N-acetylmuramoyl-l-al 23.2 2E+02 0.0044 26.4 5.5 38 54-92 192-234 (445)
363 TIGR03607 patatin-related prot 23.1 81 0.0017 31.1 3.1 31 83-113 52-85 (739)
364 cd02653 nuc_hydro_3 NH_3: A su 23.1 2.5E+02 0.0053 24.6 5.9 47 79-129 100-150 (320)
365 PF01580 FtsK_SpoIIIE: FtsK/Sp 23.1 1.9E+02 0.0042 22.9 5.0 39 29-67 41-85 (205)
366 PLN02752 [acyl-carrier protein 23.1 63 0.0014 28.4 2.3 29 85-113 109-143 (343)
367 COG3673 Uncharacterized conser 23.0 5.3E+02 0.011 22.8 8.0 88 27-114 33-142 (423)
368 PRK11789 N-acetyl-anhydromuran 22.9 85 0.0018 25.0 2.7 27 77-103 132-158 (185)
369 PLN02717 uridine nucleosidase 22.8 3E+02 0.0065 24.0 6.3 48 79-129 103-154 (316)
370 TIGR02813 omega_3_PfaA polyket 22.8 70 0.0015 36.5 2.9 29 84-112 664-692 (2582)
371 PRK14194 bifunctional 5,10-met 22.5 1.3E+02 0.0029 25.9 4.0 35 81-115 143-183 (301)
372 COG0529 CysC Adenylylsulfate k 22.3 2.5E+02 0.0054 22.4 5.0 40 27-66 24-67 (197)
373 PRK06731 flhF flagellar biosyn 22.2 4.9E+02 0.011 22.1 9.6 72 44-125 145-219 (270)
374 KOG1252 Cystathionine beta-syn 22.1 2.3E+02 0.005 25.0 5.2 117 7-125 187-335 (362)
375 smart00824 PKS_TE Thioesterase 21.9 1.6E+02 0.0034 22.8 4.3 59 242-306 151-211 (212)
376 cd07217 Pat17_PNPLA8_PNPLA9_li 21.7 64 0.0014 28.5 2.0 19 97-115 44-62 (344)
377 COG1598 Predicted nuclease of 21.6 2E+02 0.0044 18.7 3.9 32 50-88 13-44 (73)
378 TIGR00521 coaBC_dfp phosphopan 21.0 6.2E+02 0.014 22.9 8.9 72 27-101 114-193 (390)
379 PRK06029 3-octaprenyl-4-hydrox 20.9 4.3E+02 0.0093 21.0 7.5 60 27-95 117-178 (185)
380 PHA02114 hypothetical protein 20.9 1.5E+02 0.0032 20.7 3.2 33 27-59 84-116 (127)
381 COG0294 FolP Dihydropteroate s 20.8 2.4E+02 0.0052 24.0 5.2 50 53-112 171-221 (274)
382 KOG1209 1-Acyl dihydroxyaceton 20.7 1.8E+02 0.0038 24.0 4.0 38 21-60 3-40 (289)
383 PF03054 tRNA_Me_trans: tRNA m 20.7 1.3E+02 0.0028 26.8 3.7 66 27-99 3-68 (356)
384 COG3675 Predicted lipase [Lipi 20.5 1.6E+02 0.0034 25.4 3.8 101 23-128 92-213 (332)
385 PF00862 Sucrose_synth: Sucros 20.0 1.5E+02 0.0033 27.7 3.9 40 76-115 382-423 (550)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=5.3e-47 Score=313.16 Aligned_cols=292 Identities=39% Similarity=0.747 Sum_probs=221.8
Q ss_pred CccceeEEEECCEEEEEEecC--CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHH
Q 021530 2 DKIEHKYIKVQGLNLHVAETG--TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKD 79 (311)
Q Consensus 2 ~~~~~~~~~~~g~~i~y~~~G--~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (311)
+.+++++++++|++++|.+.| +|| .|+|+||||.++++|+.+++.|...+|||||+|+||||.|+.|...+.||+..
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP-~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGP-IVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCC-EEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 567789999999999999998 555 89999999999999999999998878999999999999999998778899999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCC--Cch-hhhhcCCchhhHhhhcCcccc
Q 021530 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP--GTA-EFHKSLPEGFYISRWQEPGRA 156 (311)
Q Consensus 80 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (311)
++.|+..+++.||.+|++++|||||+.||+.+|+.+|++|+++|+++.++... .+. ...+.+.+.++...++.+...
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcc
Confidence 99999999999999999999999999999999999999999999998765411 111 111122333333333333444
Q ss_pred ccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccccccc
Q 021530 157 EADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKF 236 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
+..+...+.+......+ ++ +.+..... . ......+.|+++++.+.+...+...++...++. +|.+..+|
T Consensus 179 E~~~s~~~~~~~~~~~~---~~-~~~~~~~~----~--~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNy-yrn~~r~w 247 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKTFR---TR-KTPGPLIV----P--KQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNY-YRNFRRNW 247 (322)
T ss_pred hhhhccchhHHhHHhhh---cc-ccCCcccc----C--CCCCCccchhhHHHHHHHHhccccccccccchh-hHHHhhCc
Confidence 44444444443333211 11 11100000 0 011122678999999988888877788888887 77777776
Q ss_pred ---CCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCe-EEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 237 ---SLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL-EIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 237 ---~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
......+++||++|+|..|.+.+.+.. ...+++.+|+. +.++++++||+++.|+|+++++.|.+|+++.
T Consensus 248 ~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~-----~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 EAAPWALAKITIPVLFIWGDLDPVLPYPIF-----GELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hhccccccccccceEEEEecCcccccchhH-----HHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 344458999999999999999976522 23455677875 8899999999999999999999999999863
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.4e-39 Score=278.87 Aligned_cols=268 Identities=29% Similarity=0.463 Sum_probs=173.9
Q ss_pred cceeEEEECCEEEEEEecCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 4 IEHKYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
+...+++++|.+++|.+.|+|+ +|||+||++++...|+.+++.|.+ .++||++|+||||.|+.+. ..|+++++++|
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~--~~~~~~~~a~d 82 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAG-LGRCLAPDLIGMGASDKPD--IDYTFADHARY 82 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhh-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHH
Confidence 4566788899999999999887 999999999999999999988876 5799999999999998764 35899999999
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchh--hHhhhcCccccccccC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGF--YISRWQEPGRAEADFG 161 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 161 (311)
+.++++++++++++|+||||||.||+.+|.++|++|+++|+++++..+..... .+... ....+...... ....
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~ 157 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDD----FPPAVRELFQALRSPGEG-EEMV 157 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhh----cchhHHHHHHHHhCcccc-cccc
Confidence 99999999999999999999999999999999999999999986322111000 00000 00001000000 0000
Q ss_pred cCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCC-ccccc---------c--c
Q 021530 162 RHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFR-TALQV---------P--Y 229 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~--~ 229 (311)
.. ....+.. .+... ....++++....+...+...... ..... . .
T Consensus 158 ~~-~~~~~~~---~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (295)
T PRK03592 158 LE-ENVFIER---VLPGS--------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADV 213 (295)
T ss_pred cc-hhhHHhh---cccCc--------------------ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhh
Confidence 00 0000000 00000 00012222222111111000000 00000 0 0
Q ss_pred cccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 230 RSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 230 ~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
............++++|||+|+|++|.++++.... +.+.+..++++++++++|||++++|+|+++++.|.+|+.+
T Consensus 214 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-----~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 214 VALVEEYAQWLATSDVPKLLINAEPGAILTTGAIR-----DWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred HhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHH-----HHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 00000111122468999999999999998544332 2234567899999999999999999999999999999975
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.7e-39 Score=278.49 Aligned_cols=276 Identities=23% Similarity=0.291 Sum_probs=173.9
Q ss_pred ccceeEEEECCEEEEEEecC-CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC-----CCcCc
Q 021530 3 KIEHKYIKVQGLNLHVAETG-TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE-----PEKAS 76 (311)
Q Consensus 3 ~~~~~~~~~~g~~i~y~~~G-~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~ 76 (311)
+.+.++++++|.+++|.+.| .|+ +|||+||+++++..|..+++.|.+ .|+||++|+||||.|+.+.. ...|+
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~-~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGP-ALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCC-eEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCC
Confidence 45678999999999999999 476 999999999999999999999876 58999999999999986531 13589
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhh--HhhhcCcc
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFY--ISRWQEPG 154 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 154 (311)
++++++|+.++++++++++++|+||||||.||+.+|+++|++|+++|+++++........... ...... ...+....
T Consensus 85 ~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 85 FETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LGRPFIKAFQNLLRET 163 (294)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hhhHHHHHHHHHHhch
Confidence 999999999999999999999999999999999999999999999999985421100000000 000000 00000000
Q ss_pred cccccc-CcCcHHHHHHHHHh-hhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCC-ccccc-ccc
Q 021530 155 RAEADF-GRHDAKTVVRNIYI-LFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFR-TALQV-PYR 230 (311)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~ 230 (311)
.....+ ........++.... .+... ...+++..+.+.......+.. ..... .+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDD----------------------SAVTDELVEAILRPGLEPGAVDVFLDFISYS 221 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccCh----------------------hhccHHHHHHHHhccCCchHHHHHHHHhccc
Confidence 000000 00000000000000 00000 001111111111000000000 00000 000
Q ss_pred ccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 231 SIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 231 ~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
. .........++++|||+|+|++|.+++.+.. +.+.+..+++++++++++||++++|+|++|++.|.+|++++
T Consensus 222 ~-~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~------~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 222 G-GPLPEELLPAVKCPVLIAWGEKDPWEPVELG------RAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred c-ccchHHHHhhcCCCeEEEEecCCCCCChHHH------HHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 0 0000111247899999999999998865322 33566678899999999999999999999999999999763
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.2e-38 Score=270.53 Aligned_cols=273 Identities=22% Similarity=0.338 Sum_probs=171.3
Q ss_pred cceeEEEECC-----EEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCc
Q 021530 4 IEHKYIKVQG-----LNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS 76 (311)
Q Consensus 4 ~~~~~~~~~g-----~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (311)
++-+++++++ .+|+|.+.|. |+ +|||+||+++++..|..+++.|.+.+|+|+++|+||||.|+++.....|+
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~-~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~ 97 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGP-PVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT 97 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCC-EEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC
Confidence 3457888888 8999999984 66 99999999999999999999887668999999999999998764434689
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCcccc
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRA 156 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (311)
++++++|+.++++++++++++|+||||||.+|+.+|.++|++|++++++++.. +..... .... ...|......
T Consensus 98 ~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-~~~~~~----~~~~--~~~~~~~~~~ 170 (302)
T PRK00870 98 YARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGL-PTGDGP----MPDA--FWAWRAFSQY 170 (302)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCC-CCcccc----chHH--Hhhhhccccc
Confidence 99999999999999999999999999999999999999999999999987531 111000 0000 0011000000
Q ss_pred ccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccccccc
Q 021530 157 EADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKF 236 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
... ..+.......... . ...+........ +..+........+...................+
T Consensus 171 ---~~~----~~~~~~~~~~~~~----~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
T PRK00870 171 ---SPV----LPVGRLVNGGTVR----D-LSDAVRAAYDAP------FPDESYKAGARAFPLLVPTSPDDPAVAANRAAW 232 (302)
T ss_pred ---Cch----hhHHHHhhccccc----c-CCHHHHHHhhcc------cCChhhhcchhhhhhcCCCCCCCcchHHHHHHH
Confidence 000 0000000000000 0 000000000000 000000000000000000000000000000001
Q ss_pred CCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeE---EEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 237 SLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLE---IIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 237 ~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
....++++|||+|+|++|.+++... +.+.+.+|+++ +++++++||++++|+|++|++.|.+|+.++
T Consensus 233 -~~l~~i~~P~lii~G~~D~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 -AVLERWDKPFLTAFSDSDPITGGGD-------AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred -HhhhcCCCceEEEecCCCCcccCch-------HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 1124789999999999999987432 23566778776 899999999999999999999999999764
No 5
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.8e-38 Score=269.10 Aligned_cols=273 Identities=22% Similarity=0.375 Sum_probs=170.8
Q ss_pred cceeEEEECCEEEEEEecCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 4 IEHKYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
++.++++++|.+++|...|+|+ +|||+||++.++..|+.+++.|.+ +|+||++|+||||.|+.+.+ ..|++++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~-~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 90 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGP-PILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEHARV 90 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCC-EEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHHHHH
Confidence 5677899999999999999887 999999999999999998888765 69999999999999987542 35899999999
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRH 163 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (311)
+.++++++++++++++||||||.|++.+|+.+|++|+++|+++++..+..... ...+ ..+............
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~- 162 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLA------MKAF-SRVMSSPPVQYAILR- 162 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchh------HHHH-HHHhccccchhhhhh-
Confidence 99999999999999999999999999999999999999998875432211000 0000 000000000000000
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCcc
Q 021530 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 243 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (311)
.....+... .... ...........+... ............... .+...... ...... ......+
T Consensus 163 -~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~--~~~~~~~ 226 (286)
T PRK03204 163 -RNFFVERLI---PAGT-EHRPSSAVMAHYRAV------QPNAAARRGVAEMPK--QILAARPL-LARLAR--EVPATLG 226 (286)
T ss_pred -hhHHHHHhc---cccc-cCCCCHHHHHHhcCC------CCCHHHHHHHHHHHH--hcchhhHH-HHHhhh--hhhhhcC
Confidence 000011100 0000 000000111111100 001111010000000 00000000 000000 0001123
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
++|||+|+|++|.++++.... +.+.+.+|++++++++++||++++|+|++|++.|.+|+.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~-----~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTIL-----PRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CCCeEEEecCCCcccCcHHHH-----HHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 899999999999987543221 346678899999999999999999999999999999973
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-37 Score=274.93 Aligned_cols=277 Identities=21% Similarity=0.287 Sum_probs=170.4
Q ss_pred eEEEECCE-EEEEEecCCC------CceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHH
Q 021530 7 KYIKVQGL-NLHVAETGTG------PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKD 79 (311)
Q Consensus 7 ~~~~~~g~-~i~y~~~G~g------~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (311)
+++..+|. +++|.+.|++ + +||||||+++++..|..+++.|.+ +|+||++|+||||.|+.+.. ..|++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp-~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~ 140 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGP-PVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMET 140 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCC-eEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHH
Confidence 46677777 9999999965 6 899999999999999999988765 79999999999999987542 3689999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh-CCCceeeEEEeccCCCCCCch---hhh-h-cCCchhhHhhh-cC
Q 021530 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPERVSGVITLGVPFIPPGTA---EFH-K-SLPEGFYISRW-QE 152 (311)
Q Consensus 80 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~---~~~-~-~~~~~~~~~~~-~~ 152 (311)
+++++.++++++++++++|+||||||.+++.+|+. +|++|+++|+++++....... ... . ..+...+...+ ..
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 99999999999999999999999999999999874 799999999998643211000 000 0 00000000000 00
Q ss_pred ccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccc
Q 021530 153 PGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSI 232 (311)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
.......+........++..+..... .+..++++....+.......+............
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYG---------------------NKEAVDDELVEIIRGPADDEGALDAFVSIVTGP 279 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhcc---------------------CcccCCHHHHHHHHhhccCCChHHHHHHHHhcC
Confidence 00000000000000011110000000 000112221111111000000000000000000
Q ss_pred c-cccCCCCCccccceEEEeeCCcccCCCCCc-hhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 233 H-EKFSLPELTVKVPALLILGEKDYFLKFPGI-EDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 233 ~-~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
. ........++++|||+|+|++|.++|++.. ..+ .+.+.+.+|+++++++++|||++++|+|++|++.|.+||.+
T Consensus 280 ~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~--~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 280 PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY--FSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH--HHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 0 000011237899999999999999876421 111 12356678999999999999999999999999999999975
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.3e-37 Score=263.10 Aligned_cols=262 Identities=17% Similarity=0.208 Sum_probs=167.2
Q ss_pred cceeEEEECCEEEEEEec--CCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHH
Q 021530 4 IEHKYIKVQGLNLHVAET--GTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDIT 81 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~--G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (311)
+-.++++++|.+++|... |++++||||+||+++++..|..+++.|.+ +|+||++|+||||.|+.+. ..|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~ 78 (276)
T TIGR02240 2 FIFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLA 78 (276)
T ss_pred eeEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHH
Confidence 345788899999999875 34534899999999999999999988765 7999999999999998643 468999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccC
Q 021530 82 NDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFG 161 (311)
Q Consensus 82 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (311)
+|+.++++++++++++|+||||||.+|+.+|.++|++|++||+++++......... +. ........... ..
T Consensus 79 ~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~--~~~~~~~~~~~---~~ 149 (276)
T TIGR02240 79 KLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK----PK--VLMMMASPRRY---IQ 149 (276)
T ss_pred HHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc----hh--HHHHhcCchhh---hc
Confidence 99999999999999999999999999999999999999999999865321100000 00 00000000000 00
Q ss_pred cCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCC
Q 021530 162 RHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPEL 241 (311)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (311)
.......... .+... .. ................... ....... ............
T Consensus 150 ~~~~~~~~~~---~~~~~-~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~-------------~~~~~~~~~~l~ 204 (276)
T TIGR02240 150 PSHGIHIAPD---IYGGA-FR---RDPELAMAHASKVRSGGKL-----GYYWQLF-------------AGLGWTSIHWLH 204 (276)
T ss_pred cccccchhhh---hccce-ee---ccchhhhhhhhhcccCCCc-----hHHHHHH-------------HHcCCchhhHhh
Confidence 0000000000 00000 00 0000000000000000000 0000000 000000001123
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
++++|||+|+|++|.++++... +.+.+.+|+++++++++ ||++++|+|+++++.|.+|+++
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~------~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINM------RLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHH------HHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 7899999999999999975432 34666789999999975 9999999999999999999975
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.7e-35 Score=253.36 Aligned_cols=269 Identities=21% Similarity=0.313 Sum_probs=162.3
Q ss_pred cceeEEEEC-----CEEEEEEecCCCCceEEEECCCCCchhhhHH---HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcC
Q 021530 4 IEHKYIKVQ-----GLNLHVAETGTGPNVVVFLHGFPEIWYSWRH---QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKA 75 (311)
Q Consensus 4 ~~~~~~~~~-----g~~i~y~~~G~g~~~vvllHG~~~~~~~w~~---~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (311)
.+.+++.++ |.+++|...|+++ +|||+||++.+...|.. .+..+.+.+|+|+++|+||||.|+.+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred CcceEEEcccccccceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 344555553 5789999999887 89999999988877763 35566666899999999999999865322222
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccc
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGR 155 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (311)
+. .+++|+.++++.+++++++++||||||.+++.+|+++|++|+++|+++++... +.... ..+.......+..
T Consensus 84 ~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~~~-~~~~~~~~~~~~~--- 156 (282)
T TIGR03343 84 GL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG--PSLFA-PMPMEGIKLLFKL--- 156 (282)
T ss_pred cc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC--ccccc-cCchHHHHHHHHH---
Confidence 32 57999999999999999999999999999999999999999999999754211 00000 0000000000000
Q ss_pred cccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhh-ccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccccc
Q 021530 156 AEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDL-VDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHE 234 (311)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
+...... ........+.... .......... .... .-.......+..... . .. +...
T Consensus 157 ----~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~---~~-~~~~-- 213 (282)
T TIGR03343 157 ----YAEPSYE-TLKQMLNVFLFDQ---SLITEELLQGRWENI-----QRQPEHLKNFLISSQ----K---AP-LSTW-- 213 (282)
T ss_pred ----hcCCCHH-HHHHHHhhCccCc---ccCcHHHHHhHHHHh-----hcCHHHHHHHHHhcc----c---cc-cccc--
Confidence 0000000 0110000000000 0000000000 0000 000000001000000 0 00 0000
Q ss_pred ccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 235 KFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 235 ~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
.......++++|+|+|+|++|.+++++.. +.+.+.+|++++++++++||+++.|+|++|++.|.+||..
T Consensus 214 ~~~~~l~~i~~Pvlli~G~~D~~v~~~~~------~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 214 DVTARLGEIKAKTLVTWGRDDRFVPLDHG------LKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hHHHHHhhCCCCEEEEEccCCCcCCchhH------HHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 00111237899999999999999975432 2355678999999999999999999999999999999963
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2.9e-35 Score=248.17 Aligned_cols=244 Identities=18% Similarity=0.251 Sum_probs=153.5
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-CcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg 105 (311)
+|||+||++.+...|+.+++.|.+.+|+||++|+||||.|+.+.. ..|+++++++|+.++++++++ ++++|+||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 699999999999999999998866689999999999999975432 358999999999999999998 499999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccCCCCCCc---hhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCC
Q 021530 106 RPAYLFALLHPERVSGVITLGVPFIPPGT---AEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIP 182 (311)
Q Consensus 106 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (311)
.|++.+|.++|++|+++|++++.....+. ......... . ...|... ..............
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~~~~~------------- 146 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG-T-EKIWDYT--FGEGPDKPPTGIMM------------- 146 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc-c-ccceeee--eccCCCCCcchhhc-------------
Confidence 99999999999999999998864211110 000000000 0 0000000 00000000000000
Q ss_pred CCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCC
Q 021530 183 IAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPG 262 (311)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~ 262 (311)
............ ...+............... . +.... ........+++|+|+|+|++|.++++..
T Consensus 147 ---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~~~~~i~vP~lvi~g~~D~~~~~~~ 211 (255)
T PLN02965 147 ---KPEFVRHYYYNQ------SPLEDYTLSSKLLRPAPVR----A-FQDLD-KLPPNPEAEKVPRVYIKTAKDNLFDPVR 211 (255)
T ss_pred ---CHHHHHHHHhcC------CCHHHHHHHHHhcCCCCCc----c-hhhhh-hccchhhcCCCCEEEEEcCCCCCCCHHH
Confidence 000000000000 0000000000111110000 0 00000 0111223689999999999999997532
Q ss_pred chhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 263 IEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
.+.+.+.+|+++++++++|||++++|+|++|++.|.+|+++
T Consensus 212 ------~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 212 ------QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred ------HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 24577789999999999999999999999999999999875
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=2.3e-35 Score=248.99 Aligned_cols=252 Identities=19% Similarity=0.257 Sum_probs=153.4
Q ss_pred EEEEEecCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC
Q 021530 15 NLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN 94 (311)
Q Consensus 15 ~i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~ 94 (311)
.++|.+.|+|+++||||||+++++..|..++..|.+ +|+|+++|+||||.|+.+ ..++++++++++.+ ++++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF---GALSLADMAEAVLQ----QAPD 74 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCC---CCCCHHHHHHHHHh----cCCC
Confidence 378999998875699999999999999999988865 699999999999999753 35788888887764 5678
Q ss_pred cEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHh
Q 021530 95 KVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYI 174 (311)
Q Consensus 95 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (311)
+++|+||||||.+|+.+|.++|++|+++|+++++........... .... ....+.. .+ ........+....
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~-~~~~~~~------~~-~~~~~~~~~~~~~ 145 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPD-VLAGFQQ------QL-SDDFQRTVERFLA 145 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccHH-HHHHHHH------HH-HhchHHHHHHHHH
Confidence 999999999999999999999999999999875322100000000 0000 0000000 00 0000111111000
Q ss_pred hhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCC
Q 021530 175 LFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEK 254 (311)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~ 254 (311)
...............+....... .. ............+ .. .+......++++|||+|+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~-------------~~--~~~~~~l~~i~~P~lii~G~~ 206 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLAL-PM---PEVDVLNGGLEIL-------------KT--VDLRQPLQNVSMPFLRLYGYL 206 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhcc-CC---CcHHHHHHHHHHH-------------Hh--CccHHHHhhcCCCeEEEecCC
Confidence 00000000000000000000000 00 0000000000000 00 011112237899999999999
Q ss_pred cccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 255 DYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 255 D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
|.+++.+.. +.+.+.+|+++++++++|||++++|+|++|++.|.+|-+
T Consensus 207 D~~~~~~~~------~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 207 DGLVPRKVV------PMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CccCCHHHH------HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 998865322 345667899999999999999999999999999999854
No 11
>PLN02578 hydrolase
Probab=100.00 E-value=6.1e-35 Score=257.15 Aligned_cols=118 Identities=24% Similarity=0.371 Sum_probs=108.4
Q ss_pred eEEEECCEEEEEEecCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 021530 7 KYIKVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLA 86 (311)
Q Consensus 7 ~~~~~~g~~i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ 86 (311)
.+.+.+|.+|+|.+.|+|+ ||||+||+++++..|..+++.|.+ +|+|+++|+||||.|+++. ..|+...+++|+.+
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred eEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 4567789999999999988 899999999999999999888865 7999999999999998764 46899999999999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 87 TLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 87 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++++++.++++++||||||.||+.+|.++|++|+++++++++
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999999999999999999999999999999999999998754
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=7.2e-35 Score=261.00 Aligned_cols=126 Identities=22% Similarity=0.378 Sum_probs=108.0
Q ss_pred ccceeEEEECCEEEEEEecCC-C---CceEEEECCCCCchhhhHH-HHHHHH---HCCcEEEEeCCCCCCCCCCCCCCCc
Q 021530 3 KIEHKYIKVQGLNLHVAETGT-G---PNVVVFLHGFPEIWYSWRH-QMVAVA---AAGFRAIAPDYRGYGLSDPPAEPEK 74 (311)
Q Consensus 3 ~~~~~~~~~~g~~i~y~~~G~-g---~~~vvllHG~~~~~~~w~~-~~~~l~---~~~~~vi~~Dl~G~G~S~~~~~~~~ 74 (311)
+..+++++++|.+++|...|. + .++|||+||++++...|.. +++.+. +.+|+||++|+||||.|+.+. ...
T Consensus 175 ~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~ 253 (481)
T PLN03087 175 KFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSL 253 (481)
T ss_pred ceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCc
Confidence 345678888999999999883 1 1389999999999999985 445554 258999999999999998764 346
Q ss_pred CcHHHHHHHHH-HHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 75 ASFKDITNDLL-ATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 75 ~~~~~~a~dl~-~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
|+++++++++. .+++++++++++++||||||.+++.+|++||++|+++|+++++.
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 89999999995 89999999999999999999999999999999999999998654
No 13
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=254.87 Aligned_cols=117 Identities=21% Similarity=0.344 Sum_probs=98.4
Q ss_pred ECCEEEEEEecCC---------CCceEEEECCCCCchhhhH--HHHHHH-------HHCCcEEEEeCCCCCCCCCCCCCC
Q 021530 11 VQGLNLHVAETGT---------GPNVVVFLHGFPEIWYSWR--HQMVAV-------AAAGFRAIAPDYRGYGLSDPPAEP 72 (311)
Q Consensus 11 ~~g~~i~y~~~G~---------g~~~vvllHG~~~~~~~w~--~~~~~l-------~~~~~~vi~~Dl~G~G~S~~~~~~ 72 (311)
++|.+++|.+.|+ ++ +|||+||++++...|. .+...+ ..++|+||++|+||||.|+.+.+.
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gp-plvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDN-AVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCC-eEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 5789999999996 56 8999999999988885 333332 135799999999999999865421
Q ss_pred -----CcCcHHHHHHHHHHH-HHHhCCCcEE-EEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 73 -----EKASFKDITNDLLAT-LDHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 73 -----~~~~~~~~a~dl~~~-l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
..|+++++++++.++ ++++++++++ |+||||||.||+.+|+++|++|+++|++++.
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 148999999999885 5889999986 8999999999999999999999999998753
No 14
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=250.83 Aligned_cols=271 Identities=24% Similarity=0.378 Sum_probs=166.0
Q ss_pred EEEECCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC--CcCcHHHHHHH
Q 021530 8 YIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP--EKASFKDITND 83 (311)
Q Consensus 8 ~~~~~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--~~~~~~~~a~d 83 (311)
.+..+|++++|.+.|+ ++ +||||||++.+...|+.+++.|.+ +|+||++|+||||.|+.+... ..|++++++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~-~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNP-PVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred EEcCCceEEEEEecCCCCCC-eEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 4556999999999984 45 899999999999999999988765 799999999999999876432 35899999999
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRH 163 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (311)
+.++++++++++++|+|||+||.|++.+|..+|++|+++|+++++..... .. .+... ..+... .....+..
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~-~~----~p~~l--~~~~~~-l~~~~~~~- 257 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEH-AK----LPSTL--SEFSNF-LLGEIFSQ- 257 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccc-cc----chHHH--HHHHHH-Hhhhhhhc-
Confidence 99999999999999999999999999999999999999999986532110 00 00000 000000 00000000
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCcc
Q 021530 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 243 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (311)
........ .+.... +..........+.... ..+.. ...........+.. . .......... ......+
T Consensus 258 ~~~~~~~~---~~~~~~-~~~~~~e~~~~~~~~~-~~~~~-~~~~l~~~~r~~~~-~----l~~~~~~l~~--~l~~~~i 324 (383)
T PLN03084 258 DPLRASDK---ALTSCG-PYAMKEDDAMVYRRPY-LTSGS-SGFALNAISRSMKK-E----LKKYIEEMRS--ILTDKNW 324 (383)
T ss_pred chHHHHhh---hhcccC-ccCCCHHHHHHHhccc-cCCcc-hHHHHHHHHHHhhc-c----cchhhHHHHh--hhccccC
Confidence 00000000 000000 0000000100000000 00000 00001111111100 0 0000000000 0011257
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
++|||+|+|++|.+++.+... .+.+. ++++++++++|||++++|+|+++++.|.+||.+
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~------~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVE------DFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHH------HHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999988654322 23333 578999999999999999999999999999863
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=9.6e-34 Score=241.66 Aligned_cols=267 Identities=22% Similarity=0.319 Sum_probs=168.6
Q ss_pred eeEEEECCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 6 HKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
.++++++|.+++|.+.|. ++ +|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++.+++|
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~-~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 84 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGP-LLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAED 84 (278)
T ss_pred cceeeECCEEEEEEecCCCCCC-eEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHHH
Confidence 467888999999999984 55 999999999999999999888765 69999999999999986542 36899999999
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRH 163 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (311)
+.++++++++++++|+||||||.+++.+|.++|+++++++++++...+... ......+.. ..+.... ..
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~-~~~~~~~~~---~~~~~~~-------~~ 153 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEG-MAGTLFPYM---ARVLACN-------PF 153 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccc-ccccccchh---hHhhhhc-------cc
Confidence 999999999999999999999999999999999999999998754321100 000000000 0000000 00
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCC-CCcccccccccc-ccccCCCCC
Q 021530 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSG-FRTALQVPYRSI-HEKFSLPEL 241 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 241 (311)
....... . ... . ..+....... ...+++.....+........ ....... .... .........
T Consensus 154 -~~~~~~~---~-~~~----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 217 (278)
T TIGR03056 154 -TPPMMSR---G-AAD----Q---QRVERLIRDT---GSLLDKAGMTYYGRLIRSPAHVDGALSM-MAQWDLAPLNRDLP 217 (278)
T ss_pred -chHHHHh---h-ccc----C---cchhHHhhcc---ccccccchhhHHHHhhcCchhhhHHHHH-hhcccccchhhhcc
Confidence 0000000 0 000 0 0000000000 00001010111110000000 0000000 0000 000011223
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
++++|+|+|+|++|.++++... +.+.+.++++++++++++||+++.|+|+++++.|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~------~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDES------KRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHH------HHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 6899999999999999875322 345667899999999999999999999999999999984
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=3e-33 Score=235.82 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=151.5
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 105 (311)
|+|||+||++++...|..++..|.+ +|+||++|+||||.|..+ ..++++++++|+.++++++++++++|+||||||
T Consensus 17 ~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~---~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg 92 (255)
T PRK10673 17 SPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD---PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGG 92 (255)
T ss_pred CCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC---CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHH
Confidence 3899999999999999998888765 799999999999999864 358999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCCCCC
Q 021530 106 RPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAP 185 (311)
Q Consensus 106 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (311)
.+++.+|.++|++|+++|+++++.......... . . ...+..... ... ......... ... . . .
T Consensus 93 ~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~----~-~-~~~~~~~~~--~~~--~~~~~~~~~-~~~--~--~--~- 154 (255)
T PRK10673 93 KAVMALTALAPDRIDKLVAIDIAPVDYHVRRHD----E-I-FAAINAVSE--AGA--TTRQQAAAI-MRQ--H--L--N- 154 (255)
T ss_pred HHHHHHHHhCHhhcceEEEEecCCCCccchhhH----H-H-HHHHHHhhh--ccc--ccHHHHHHH-HHH--h--c--C-
Confidence 999999999999999999987432110000000 0 0 000000000 000 000000000 000 0 0 0
Q ss_pred chhhhhhhccCCCCCCCC-CCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCCch
Q 021530 186 ENKEIMDLVDASTPLPPW-LTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIE 264 (311)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~ 264 (311)
................+ +... ..... +.... .......+++|+|+|+|++|.+++.+.
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~~--~~~~~~~~~~P~l~i~G~~D~~~~~~~-- 213 (255)
T PRK10673 155 -EEGVIQFLLKSFVDGEWRFNVP---VLWDQ-------------YPHIV--GWEKIPAWPHPALFIRGGNSPYVTEAY-- 213 (255)
T ss_pred -CHHHHHHHHhcCCcceeEeeHH---HHHHh-------------HHHHh--CCcccCCCCCCeEEEECCCCCCCCHHH--
Confidence 00000000000000000 0000 00000 00000 001223689999999999999886432
Q ss_pred hhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 265 DYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 265 ~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
.+.+.+.+|++++++++++||++++|+|+++++.|.+||.++
T Consensus 214 ----~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 214 ----RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred ----HHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 234667789999999999999999999999999999999763
No 17
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1.5e-32 Score=229.90 Aligned_cols=97 Identities=27% Similarity=0.342 Sum_probs=88.6
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
+|||+||+++++..|..+++.| + +|+|+++|+||||.|+.+. ..+++++++|+.++++++++++++++||||||.
T Consensus 4 ~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 4 WLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred EEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 8999999999999999999876 4 6999999999999998653 349999999999999999999999999999999
Q ss_pred HHHHHHHhCCCc-eeeEEEeccC
Q 021530 107 PAYLFALLHPER-VSGVITLGVP 128 (311)
Q Consensus 107 ia~~~a~~~p~~-v~~lvl~~~~ 128 (311)
+|+.+|.++|++ |+++++++++
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCC
Confidence 999999999764 9999988754
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.8e-33 Score=246.98 Aligned_cols=118 Identities=27% Similarity=0.348 Sum_probs=98.9
Q ss_pred eeEEEECCEEEEEEecCC-CCceEEEECCCCCchh------------hhHHHHH---HHHHCCcEEEEeCCCCCCCCCCC
Q 021530 6 HKYIKVQGLNLHVAETGT-GPNVVVFLHGFPEIWY------------SWRHQMV---AVAAAGFRAIAPDYRGYGLSDPP 69 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G~-g~~~vvllHG~~~~~~------------~w~~~~~---~l~~~~~~vi~~Dl~G~G~S~~~ 69 (311)
..+.+++|.+++|++.|+ |+ |+|||||+.++.. .|..++. .|..++|+||++|+||||.|..
T Consensus 38 ~~~~~~~~~~l~y~~~G~~~~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~- 115 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPAGA-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD- 115 (343)
T ss_pred ecCCCCCCceEEEEEeccCCC-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-
Confidence 345556899999999995 66 6888877766655 6887775 4543479999999999998842
Q ss_pred CCCCcCcHHHHHHHHHHHHHHhCCCcE-EEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 70 AEPEKASFKDITNDLLATLDHLGINKV-FLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 70 ~~~~~~~~~~~a~dl~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
..|+++++++|+.+++++++++++ +|+||||||.||+.+|.+||++|+++|++++.
T Consensus 116 ---~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 116 ---VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred ---CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 347899999999999999999875 79999999999999999999999999999864
No 19
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=6.8e-33 Score=243.22 Aligned_cols=119 Identities=19% Similarity=0.316 Sum_probs=92.6
Q ss_pred EECCEEEEEEecCC----CCceEEEECCCCCchhhhHHHH---HHHHHCCcEEEEeCCCCCCCCCCCCCC-CcCcHHH--
Q 021530 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWYSWRHQM---VAVAAAGFRAIAPDYRGYGLSDPPAEP-EKASFKD-- 79 (311)
Q Consensus 10 ~~~g~~i~y~~~G~----g~~~vvllHG~~~~~~~w~~~~---~~l~~~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~-- 79 (311)
+++|.+++|.+.|+ ++|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+... ..|+++.
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 35788999999984 3335777777777777776443 355445799999999999999865421 2355443
Q ss_pred ---HHHHHHH----HHHHhCCCc-EEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 80 ---ITNDLLA----TLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 80 ---~a~dl~~----~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+++|+.+ ++++|++++ ++||||||||.||+.+|++||++|++||++++.
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 5677765 788999999 589999999999999999999999999999754
No 20
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=6.9e-32 Score=232.40 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=153.2
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (311)
++||++|||+++...|+.+++.|.+. +++|.++|++|||.|+..+....|+..++++-+..++...+.++++++|||+|
T Consensus 59 ~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~G 138 (326)
T KOG1454|consen 59 PPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLG 138 (326)
T ss_pred CcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcH
Confidence 38999999999999999999888764 39999999999997666555556999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCceeeEEE---eccCCCCCC--chhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCC
Q 021530 105 ARPAYLFALLHPERVSGVIT---LGVPFIPPG--TAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRS 179 (311)
Q Consensus 105 g~ia~~~a~~~p~~v~~lvl---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (311)
|.+|+.+|+.+|+.|+++++ ++.+..... ........ ....................... +......
T Consensus 139 g~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~ 210 (326)
T KOG1454|consen 139 GIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL------DKFLSALELLIPLSLTEPVRLVS--EGLLRCL 210 (326)
T ss_pred HHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh------hhhccHhhhcCccccccchhhee--Hhhhcce
Confidence 99999999999999999994 443322110 00000000 00000000000000000000000 0000000
Q ss_pred CCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHH-HccCCCCc-ccccccccccc---ccCCCCCccc-cceEEEeeC
Q 021530 180 EIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGAL-YEKSGFRT-ALQVPYRSIHE---KFSLPELTVK-VPALLILGE 253 (311)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~---~~~~~~~~i~-~P~L~i~G~ 253 (311)
.. ....... ..+........ ......+. .+.+ +..... .......++. ||+|+|||+
T Consensus 211 ~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~pvlii~G~ 273 (326)
T KOG1454|consen 211 KV---------------VYTDPSR-LLEKLLHLLSRPVKEHFHRDARLSL-FLELLGFDENLLSLIKKIWKCPVLIIWGD 273 (326)
T ss_pred ee---------------ecccccc-chhhhhhheecccccchhhhheeeE-EEeccCccchHHHhhccccCCceEEEEcC
Confidence 00 0000000 00000000000 00000000 0000 111111 1111123565 999999999
Q ss_pred CcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 254 KDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 254 ~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
+|.++|.+. +..+++.+|++++++|++|||.+|+|.|+++++.|..|+...
T Consensus 274 ~D~~~p~~~------~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 274 KDQIVPLEL------AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cCCccCHHH------HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999998652 234666679999999999999999999999999999999753
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.1e-31 Score=225.88 Aligned_cols=253 Identities=20% Similarity=0.276 Sum_probs=156.5
Q ss_pred EEEEecCC---CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Q 021530 16 LHVAETGT---GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 16 i~y~~~G~---g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
++|...|+ +.|+|||+||+++++..|...+..+.+ +|+|+++|+||||.|+.+. ...++++++++++.++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGEL-PPGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHhC
Confidence 46777773 234899999999999999988877765 7999999999999997643 356899999999999999999
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHH
Q 021530 93 INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNI 172 (311)
Q Consensus 93 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (311)
+++++++||||||.+|+.+|+++|++|+++|++++.... .+.... .... ...+... ........ ....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~-~~~~---~~~~~~~------~~~~~~~~-~~~~ 146 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRR-CFDV---RIALLQH------AGPEAYVH-AQAL 146 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHH-HHHH---HHHHHhc------cCcchhhh-hhhh
Confidence 999999999999999999999999999999998753211 110000 0000 0000000 00000000 0000
Q ss_pred HhhhcCCCCCCCCchhhhhhh-ccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEe
Q 021530 173 YILFSRSEIPIAPENKEIMDL-VDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLIL 251 (311)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~ 251 (311)
+. +...... ......... .... ................. ..........+++|+|+++
T Consensus 147 ~~-~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~i~~P~l~i~ 205 (257)
T TIGR03611 147 FL-YPADWIS--ENAARLAADEAHAL---AHFPGKANVLRRINALE---------------AFDVSARLDRIQHPVLLIA 205 (257)
T ss_pred hh-ccccHhh--ccchhhhhhhhhcc---cccCccHHHHHHHHHHH---------------cCCcHHHhcccCccEEEEe
Confidence 00 0000000 000000000 0000 00000000000000000 0001111236899999999
Q ss_pred eCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 252 GEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 252 G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
|++|.+++++.. ..+.+.++++++++++++||++++|+|+++++.|.+||++
T Consensus 206 g~~D~~~~~~~~------~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 206 NRDDMLVPYTQS------LRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred cCcCcccCHHHH------HHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999875432 2355567899999999999999999999999999999963
No 22
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.98 E-value=8.7e-32 Score=205.57 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=169.4
Q ss_pred ccceeEEEECCEEEEEEecCCCCceEEEECCC-CCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCC-cCcHHH
Q 021530 3 KIEHKYIKVQGLNLHVAETGTGPNVVVFLHGF-PEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPE-KASFKD 79 (311)
Q Consensus 3 ~~~~~~~~~~g~~i~y~~~G~g~~~vvllHG~-~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~ 79 (311)
.++.+.+.+||.+++|...|+|++.|+++.|. ++...+|..++..+.+. .++||++|.||||.|.+|...- .--+..
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 35567889999999999999999889999996 56677899988766543 4999999999999998765321 123444
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC-CCCCC-chhhhhcCCchhhHhhhcCccccc
Q 021530 80 ITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP-FIPPG-TAEFHKSLPEGFYISRWQEPGRAE 157 (311)
Q Consensus 80 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 157 (311)
-|++...+|++|+.++++++|||-||..|+..|+++++.|.++++.++. +.... ...+.. ..+ ...|....
T Consensus 100 Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kg-iRd---v~kWs~r~--- 172 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKG-IRD---VNKWSARG--- 172 (277)
T ss_pred hHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhc-hHH---Hhhhhhhh---
Confidence 5777888999999999999999999999999999999999999998753 22211 000000 000 01111000
Q ss_pred cccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccc-cc-c
Q 021530 158 ADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSI-HE-K 235 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 235 (311)
+ +-..+. .+.+.++..+..+.. .+.. +.++ .. -
T Consensus 173 ----R----~P~e~~-------------------------------Yg~e~f~~~wa~wvD-----~v~q-f~~~~dG~f 207 (277)
T KOG2984|consen 173 ----R----QPYEDH-------------------------------YGPETFRTQWAAWVD-----VVDQ-FHSFCDGRF 207 (277)
T ss_pred ----c----chHHHh-------------------------------cCHHHHHHHHHHHHH-----HHHH-HhhcCCCch
Confidence 0 000000 011111111110000 0000 0000 00 0
Q ss_pred cCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 236 FSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 236 ~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
++...++++||||+++|+.|++++.+.+ ..+....+.+++++.+.++|.+|+..|++|+..+.+||+++
T Consensus 208 Cr~~lp~vkcPtli~hG~kDp~~~~~hv------~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 208 CRLVLPQVKCPTLIMHGGKDPFCGDPHV------CFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred HhhhcccccCCeeEeeCCcCCCCCCCCc------cchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 2334568999999999999999975433 34556778999999999999999999999999999999864
No 23
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=2.5e-32 Score=240.42 Aligned_cols=120 Identities=23% Similarity=0.360 Sum_probs=98.7
Q ss_pred EECCEEEEEEecCC----CCceEEEECCCCCchhh-----------hHHHHH---HHHHCCcEEEEeCCCC--CCCCCCC
Q 021530 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWYS-----------WRHQMV---AVAAAGFRAIAPDYRG--YGLSDPP 69 (311)
Q Consensus 10 ~~~g~~i~y~~~G~----g~~~vvllHG~~~~~~~-----------w~~~~~---~l~~~~~~vi~~Dl~G--~G~S~~~ 69 (311)
.++|.+|+|.++|. +.++|||+||++++++. |+.++. .|..++|+||++|+|| ||.|.+.
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 45889999999983 22389999999998743 776652 4545689999999999 6666431
Q ss_pred C---C-------CCcCcHHHHHHHHHHHHHHhCCCc-EEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 70 A---E-------PEKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 70 ~---~-------~~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
. . ...|+++++++|+.++++++++++ ++|+||||||.+++.+|+++|++|+++|++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 1 1 124899999999999999999999 9999999999999999999999999999998643
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.98 E-value=2.9e-31 Score=221.90 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=157.0
Q ss_pred EEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Q 021530 15 NLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 15 ~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
+++|...|+ +.|+|||+||++.+...|...++.|. .+|+|+++|+||||.|+.+. ..++++++++|+.++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC
Confidence 367887884 44589999999999999998888775 58999999999999997543 46899999999999999999
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHH
Q 021530 93 INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNI 172 (311)
Q Consensus 93 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (311)
.++++++||||||.+++.+|.++|++|+++++++++.....+...... ...+. ...........
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~------~~~~~----------~~~~~~~~~~~ 141 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR------IAAVR----------AEGLAALADAV 141 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH------Hhhhh----------hccHHHHHHHH
Confidence 999999999999999999999999999999988753221111000000 00000 00000000000
Q ss_pred H-hhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccc-cccCCCCCccccceEEE
Q 021530 173 Y-ILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIH-EKFSLPELTVKVPALLI 250 (311)
Q Consensus 173 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~L~i 250 (311)
. ..+.. ..... .......+...+........... ..... ........++++|+|++
T Consensus 142 ~~~~~~~-~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pvlii 199 (251)
T TIGR02427 142 LERWFTP-GFREA--------------------HPARLDLYRNMLVRQPPDGYAGC-CAAIRDADFRDRLGAIAVPTLCI 199 (251)
T ss_pred HHHHccc-ccccC--------------------ChHHHHHHHHHHHhcCHHHHHHH-HHHHhcccHHHHhhhcCCCeEEE
Confidence 0 00000 00000 00000000000000000000000 00000 00011123689999999
Q ss_pred eeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 251 LGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 251 ~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
+|++|.+++.+... .+.+..++.++++++++||+++.|+|+++++.|.+|++
T Consensus 200 ~g~~D~~~~~~~~~------~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 200 AGDQDGSTPPELVR------EIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EeccCCcCChHHHH------HHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999764322 34556788999999999999999999999999999984
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.98 E-value=3.9e-31 Score=220.50 Aligned_cols=243 Identities=16% Similarity=0.220 Sum_probs=145.1
Q ss_pred CCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 22 GTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 22 G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
|+|+++|||+||+++++..|..++..|.+ +|+|+++|+||||.|+.. ..++++++++++.++++ ++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~~----~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF---GPLSLADAAEAIAAQAP----DPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC---CCcCHHHHHHHHHHhCC----CCeEEEEE
Confidence 56734899999999999999998888764 799999999999999753 34788999888876643 68999999
Q ss_pred CcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHh--hhcCC
Q 021530 102 DFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYI--LFSRS 179 (311)
Q Consensus 102 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 179 (311)
||||.+++.+|.++|++|+++|++++.........+...... .....+.. .+ ............. .+...
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~ 144 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKP-DVLTGFQQ------QL-SDDYQRTIERFLALQTLGTP 144 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCH-HHHHHHHH------Hh-hhhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999998753211100000000000 00000000 00 0000000110000 00000
Q ss_pred CCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCC
Q 021530 180 EIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLK 259 (311)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~ 259 (311)
. .......+....... .. .....+......+ . .........++++|+|+|+|++|.+++
T Consensus 145 ~--~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~-------------~--~~~~~~~l~~i~~Pvlii~g~~D~~~~ 203 (245)
T TIGR01738 145 T--ARQDARALKQTLLAR-PT---PNVQVLQAGLEIL-------------A--TVDLRQPLQNISVPFLRLYGYLDGLVP 203 (245)
T ss_pred c--cchHHHHHHHHhhcc-CC---CCHHHHHHHHHHh-------------h--cccHHHHHhcCCCCEEEEeecCCcccC
Confidence 0 000000000000000 00 0000000000000 0 000001123689999999999999987
Q ss_pred CCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHH
Q 021530 260 FPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFL 307 (311)
Q Consensus 260 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 307 (311)
.+.. +.+.+.+|++++++++++||++++|+|++|++.|.+|+
T Consensus 204 ~~~~------~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 204 AKVV------PYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHH------HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 5432 23556789999999999999999999999999999996
No 26
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=8e-32 Score=239.12 Aligned_cols=119 Identities=21% Similarity=0.324 Sum_probs=96.7
Q ss_pred EECCEEEEEEecCC----CCceEEEECCCCCchhh-------------hHHHHH---HHHHCCcEEEEeCCCCC-CCCCC
Q 021530 10 KVQGLNLHVAETGT----GPNVVVFLHGFPEIWYS-------------WRHQMV---AVAAAGFRAIAPDYRGY-GLSDP 68 (311)
Q Consensus 10 ~~~g~~i~y~~~G~----g~~~vvllHG~~~~~~~-------------w~~~~~---~l~~~~~~vi~~Dl~G~-G~S~~ 68 (311)
+++|.+++|.+.|+ +.|+|||+||+++++.. |+.++. .+...+|+||++|+||+ |.|+.
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 35788899999984 12389999999999985 666552 34345899999999993 54533
Q ss_pred CCC--C----------CcCcHHHHHHHHHHHHHHhCCCc-EEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 69 PAE--P----------EKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 69 ~~~--~----------~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+.. + ..|+++++++++.++++++++++ ++|+||||||.+++.+|.++|++|+++|++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 210 0 15899999999999999999999 599999999999999999999999999999864
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.98 E-value=7.4e-31 Score=224.23 Aligned_cols=122 Identities=24% Similarity=0.381 Sum_probs=100.4
Q ss_pred eeEEEECCEEEEEEecC-CC-CceEEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCC-cCcHHHHH
Q 021530 6 HKYIKVQGLNLHVAETG-TG-PNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPE-KASFKDIT 81 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G-~g-~~~vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~a 81 (311)
+.+++++|.++.|...| .+ +++|||+||+++++..|...+..+++. +|+|+++|+||||.|+.+.... .+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 4 EGIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred cceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 44677888888998776 22 238999999877665554444445443 7999999999999998653222 38999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 82 NDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 82 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+|+.++++++++++++++||||||.+++.+|.++|++|++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 9999999999999999999999999999999999999999998874
No 28
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.9e-31 Score=231.64 Aligned_cols=119 Identities=23% Similarity=0.389 Sum_probs=99.9
Q ss_pred EEECCEEEEEEecCC--C--CceEEEECCCCCchhh-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 9 IKVQGLNLHVAETGT--G--PNVVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 9 ~~~~g~~i~y~~~G~--g--~~~vvllHG~~~~~~~-w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
++.+|.+++|..++. + .++|||+||+++++.. |..++..|.+.||+|+++|+||||.|+.+. ...++++++++|
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~d 145 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-GYIPSFDDLVDD 145 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-CCcCCHHHHHHH
Confidence 445899999988762 2 2379999999988654 677888887778999999999999998643 223599999999
Q ss_pred HHHHHHHhCCC------cEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 84 LLATLDHLGIN------KVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 84 l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+.++++.++.+ +++|+||||||.|++.+|+++|++|+++|++++.
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 99999988653 7999999999999999999999999999999753
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=3.9e-30 Score=224.62 Aligned_cols=123 Identities=20% Similarity=0.252 Sum_probs=105.1
Q ss_pred eeEEEECCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC----CcCcHHH
Q 021530 6 HKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP----EKASFKD 79 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~ 79 (311)
..++..+|.+++|..+|. ..++||++||++++...|..++..+.+.+|+|+++|+||||.|+.+.+. ..+++++
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 345667999999999862 2238999999999998898888888888999999999999999764321 2368999
Q ss_pred HHHHHHHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 80 ITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 80 ~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+++|+.++++.+ +..+++++||||||.+++.+|+++|++|+++|++++.
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 999999999987 6789999999999999999999999999999988753
No 30
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=6.1e-30 Score=217.22 Aligned_cols=115 Identities=17% Similarity=0.310 Sum_probs=100.7
Q ss_pred ECCEEEEEEec-CCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Q 021530 11 VQGLNLHVAET-GTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD 89 (311)
Q Consensus 11 ~~g~~i~y~~~-G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~ 89 (311)
-||-+++|..- ++++ +|||+||++.+...|..++..|.+.+|+|+++|+||||.|.... ...++++++++++.++++
T Consensus 4 ~~~~~~~~~~~~~~~p-~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~-~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 4 ENGEEVTDMKPNRQPP-HFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDA-DSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred ccccccccccccCCCC-eEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCc-ccCCCHHHHHHHHHHHHH
Confidence 37888998875 4666 89999999999999999888887668999999999999985432 234799999999999999
Q ss_pred HhC-CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 90 HLG-INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 90 ~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+++ .++++||||||||.+++.++.++|++|+++|++++
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 995 58999999999999999999999999999999864
No 31
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=2.5e-29 Score=214.55 Aligned_cols=120 Identities=18% Similarity=0.174 Sum_probs=97.6
Q ss_pred EEEECCEEEEEEecCC--CC-ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHH
Q 021530 8 YIKVQGLNLHVAETGT--GP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDL 84 (311)
Q Consensus 8 ~~~~~g~~i~y~~~G~--g~-~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl 84 (311)
++..||.+++|..+-. .+ +.|+++||+++++..|..++..|.+.+|+|+++|+||||.|+... ....++..+.+|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHH
Confidence 5566999999987642 22 246666999999999999999988778999999999999997532 1224667778888
Q ss_pred HHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 85 LATLDHL----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 85 ~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
.+.++.+ ..++++|+||||||.+|+.+|.++|++++++|++++.
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 8877654 3468999999999999999999999999999999753
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=3.1e-29 Score=209.31 Aligned_cols=102 Identities=39% Similarity=0.615 Sum_probs=92.6
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH-HHHHHHHhCCCcEEEEEeCcC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND-LLATLDHLGINKVFLVAKDFG 104 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d-l~~~l~~l~~~~~~lvGhS~G 104 (311)
|+|||+||++++...|..++..|. .+|+|+++|+||||.|+.+.....+++++++++ +.++++.++.++++++|||+|
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 80 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMG 80 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccH
Confidence 389999999999999999998886 589999999999999987654456899999999 788999999999999999999
Q ss_pred hHHHHHHHHhCCCceeeEEEeccC
Q 021530 105 ARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 105 g~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
|.+++.+|.++|++|++++++++.
T Consensus 81 g~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 81 GRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred HHHHHHHHHhCchheeeeEEecCC
Confidence 999999999999999999998753
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=2.9e-29 Score=223.08 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=161.8
Q ss_pred eEEEECCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHH
Q 021530 7 KYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDL 84 (311)
Q Consensus 7 ~~~~~~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl 84 (311)
..+.+++.+++|...|+ ++ +|||+||++++...|..++..|.+ +|+|+++|+||||.|.... ..++++++++++
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~-~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~ 187 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGT-PVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAV 187 (371)
T ss_pred CcceEcCcEEEEecccCCCCC-eEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 35667888999998874 45 899999999999999988888765 6999999999999996543 357999999999
Q ss_pred HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCc
Q 021530 85 LATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHD 164 (311)
Q Consensus 85 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (311)
.++++.++.++++|+||||||.+++.+|..+|+++.++++++++...... ... +...+.... ....
T Consensus 188 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-------~~~-~~~~~~~~~------~~~~ 253 (371)
T PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-------NGD-YIDGFVAAE------SRRE 253 (371)
T ss_pred HHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-------chh-HHHHhhccc------chhH
Confidence 99999999999999999999999999999999999999998754211000 000 000110000 0000
Q ss_pred HHHHHHHHHhhhcCCCCCCCCchhhhhh-hccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCcc
Q 021530 165 AKTVVRNIYILFSRSEIPIAPENKEIMD-LVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 243 (311)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (311)
....+.. .+.... . ....+.. ..... . ..... ..+....... +...... .........+
T Consensus 254 ~~~~~~~---~~~~~~---~-~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~----~~~~~~~------~~~~~~l~~i 313 (371)
T PRK14875 254 LKPVLEL---LFADPA---L-VTRQMVEDLLKYK-R-LDGVD-DALRALADAL----FAGGRQR------VDLRDRLASL 313 (371)
T ss_pred HHHHHHH---HhcChh---h-CCHHHHHHHHHHh-c-cccHH-HHHHHHHHHh----ccCcccc------hhHHHHHhcC
Confidence 1111111 001000 0 0000000 00000 0 00000 0000000000 0000000 0011112368
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
+||+|+++|++|.+++.... ....+++++++++++||++++|+|+++++.|.+|+.+
T Consensus 314 ~~Pvlii~g~~D~~vp~~~~---------~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 314 AIPVLVIWGEQDRIIPAAHA---------QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCEEEEEECCCCccCHHHH---------hhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999999999998864321 1234578999999999999999999999999999975
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.7e-28 Score=203.91 Aligned_cols=121 Identities=23% Similarity=0.353 Sum_probs=99.8
Q ss_pred eeEEEE-CCEEEEEEecC----CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCC--CcCcHH
Q 021530 6 HKYIKV-QGLNLHVAETG----TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEP--EKASFK 78 (311)
Q Consensus 6 ~~~~~~-~g~~i~y~~~G----~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--~~~~~~ 78 (311)
.+++.+ ++..++..+.- +.. |+|||||++.+...|-..+..|.+ .++|+++|+||+|+|++|.=. ..-.-.
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~-plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~ 144 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKT-PLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEK 144 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCC-cEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchH
Confidence 345555 55555544332 334 899999999999999999999876 799999999999999987321 123445
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
.++|-|.+...+.|++|..|+|||+||.+|..||++||++|+.|||+++-
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 79999999999999999999999999999999999999999999998753
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=9.8e-31 Score=215.26 Aligned_cols=100 Identities=44% Similarity=0.645 Sum_probs=91.7
Q ss_pred EEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHH
Q 021530 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARP 107 (311)
Q Consensus 28 vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~i 107 (311)
|||+||++++...|..+++.| +.+|+|+++|+||||.|+.+.....++++++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999999999999888 4689999999999999987653346899999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeeEEEeccC
Q 021530 108 AYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 108 a~~~a~~~p~~v~~lvl~~~~ 128 (311)
++.++.++|++|+++|+++++
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~ 100 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPP 100 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESES
T ss_pred ccccccccccccccceeeccc
Confidence 999999999999999999865
No 36
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=4.3e-29 Score=218.43 Aligned_cols=120 Identities=20% Similarity=0.361 Sum_probs=96.6
Q ss_pred EEE-ECCEEEEEEecC---CCC--ceEEEECCCCCch-hhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHH
Q 021530 8 YIK-VQGLNLHVAETG---TGP--NVVVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDI 80 (311)
Q Consensus 8 ~~~-~~g~~i~y~~~G---~g~--~~vvllHG~~~~~-~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (311)
+++ .||.+|+|..++ .++ ++|||+||++.+. ..|......|.+.||+|+++|+||||.|+... ....+++.+
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR-AYVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc-ccCCCHHHH
Confidence 444 499999998764 122 2599999998664 34555556677778999999999999997543 234689999
Q ss_pred HHHHHHHHHHhCC------CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 81 TNDLLATLDHLGI------NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 81 a~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++|+.++++.++. .+++|+||||||.+++.++..+|++|+++|++++.
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 9999999998864 36999999999999999999999999999998753
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.3e-28 Score=217.98 Aligned_cols=112 Identities=24% Similarity=0.326 Sum_probs=91.0
Q ss_pred EEEEEecC---CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCC---cCcHHHHHHHHHHHH
Q 021530 15 NLHVAETG---TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPE---KASFKDITNDLLATL 88 (311)
Q Consensus 15 ~i~y~~~G---~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~a~dl~~~l 88 (311)
.+++.... +++ +|||+||++.+...|...+..|.+ +|+|+++|+||||.|+.+.... ....+.+++++.+++
T Consensus 93 ~~~~~~~~~~~~~p-~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDSKEDAP-TLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecCCCCCC-EEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 55554432 345 899999999999999888888766 6999999999999998653110 011234678888999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 89 DHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+.+++++++|+||||||.+|+.+|+++|++|+++|++++.
T Consensus 171 ~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 171 KAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 9999999999999999999999999999999999998754
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=4.8e-29 Score=215.69 Aligned_cols=122 Identities=29% Similarity=0.398 Sum_probs=102.7
Q ss_pred ceeEEEE-CCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHH
Q 021530 5 EHKYIKV-QGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDIT 81 (311)
Q Consensus 5 ~~~~~~~-~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (311)
..+++.+ +|.+|+|.+.|+ ++ +|||+||++++...|. ....+...+|+||++|+||||.|+.+.....++.++++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~~~-~lvllHG~~~~~~~~~-~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPDGK-PVVFLHGGPGSGTDPG-CRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCCCC-EEEEECCCCCCCCCHH-HHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 4567777 788999999984 66 8999999988766543 33344445799999999999999865433457899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 82 NDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 82 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+|+..+++++++++++++||||||.+++.++.++|++|+++|++++.
T Consensus 83 ~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 83 ADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred HHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 99999999999999999999999999999999999999999998753
No 39
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=1.6e-28 Score=230.67 Aligned_cols=122 Identities=25% Similarity=0.451 Sum_probs=102.9
Q ss_pred cceeEEEECCEEEEEEecCC--CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHH
Q 021530 4 IEHKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDIT 81 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~G~--g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (311)
.+..++..+|.+|+|...|+ ++ +|||+||+++++..|..+++.| ..+|+|+++|+||||.|+.+.....|++++++
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~~~~~-~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 3 PRRTVVSSDGVRLAVYEWGDPDRP-TVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred ceEEEEeeCCEEEEEEEcCCCCCC-eEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 44556777999999999983 55 8999999999999999998887 45899999999999999865544578999999
Q ss_pred HHHHHHHHHhCCCc-EEEEEeCcChHHHHHHHHh--CCCceeeEEEecc
Q 021530 82 NDLLATLDHLGINK-VFLVAKDFGARPAYLFALL--HPERVSGVITLGV 127 (311)
Q Consensus 82 ~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~ 127 (311)
+|+.++++++++.+ ++|+||||||.+++.++.. +|+++..++.+++
T Consensus 81 ~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 81 DDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 99999999999876 9999999999999988776 3456666665543
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=3.1e-28 Score=247.35 Aligned_cols=110 Identities=31% Similarity=0.454 Sum_probs=96.9
Q ss_pred EEEEecCC---CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC------CCcCcHHHHHHHHHH
Q 021530 16 LHVAETGT---GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE------PEKASFKDITNDLLA 86 (311)
Q Consensus 16 i~y~~~G~---g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~~a~dl~~ 86 (311)
++|...|+ ++ +|||+||++++...|..++..|.+ +|+||++|+||||.|+.+.. ...++++.+++++.+
T Consensus 1360 i~~~~~G~~~~~~-~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ 1437 (1655)
T PLN02980 1360 IKVHEVGQNAEGS-VVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYK 1437 (1655)
T ss_pred EEEEecCCCCCCC-eEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHH
Confidence 55666774 44 899999999999999999888764 69999999999999975421 235799999999999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 87 TLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 87 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+++++++++++|+||||||.+|+.+|.+||++|+++|++++
T Consensus 1438 ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1438 LIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 99999999999999999999999999999999999999875
No 41
>PLN02511 hydrolase
Probab=99.95 E-value=1.6e-26 Score=205.39 Aligned_cols=267 Identities=21% Similarity=0.283 Sum_probs=151.7
Q ss_pred eeEEEE-CCEEEEEE--e-----cCCCCceEEEECCCCCchhh-h-HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcC
Q 021530 6 HKYIKV-QGLNLHVA--E-----TGTGPNVVVFLHGFPEIWYS-W-RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKA 75 (311)
Q Consensus 6 ~~~~~~-~g~~i~y~--~-----~G~g~~~vvllHG~~~~~~~-w-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (311)
...+.+ ||..+.+. . ...+.|+||++||+.+++.. | ...+..+.+++|+||++|+||||.|.... +. +
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-~~-~ 150 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-PQ-F 150 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-cC-E
Confidence 345555 77777642 1 11223389999999776543 4 44556666779999999999999997542 22 2
Q ss_pred cHHHHHHHHHHHHHHhCC----CcEEEEEeCcChHHHHHHHHhCCCc--eeeEEEeccCCCCC-CchhhhhcCCchhhHh
Q 021530 76 SFKDITNDLLATLDHLGI----NKVFLVAKDFGARPAYLFALLHPER--VSGVITLGVPFIPP-GTAEFHKSLPEGFYIS 148 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (311)
....+++|+.++++.++. .+++++||||||.+++.|+..+|++ |.+++++++|.... ....+...+. ..+..
T Consensus 151 ~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~-~~y~~ 229 (388)
T PLN02511 151 YSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFN-NVYDK 229 (388)
T ss_pred EcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHH-HHHHH
Confidence 335678899999998876 5899999999999999999999987 88888887553210 0000000000 00000
Q ss_pred hhcCccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHcc--CCCCcccc
Q 021530 149 RWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEK--SGFRTALQ 226 (311)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 226 (311)
.+. . ..+....+....+... +..-.... .... .+ +.++...+.. .++.....
T Consensus 230 ~~~----------~-~l~~~~~~~~~~~~~~--~~~~~~~~----~~~~------~~---~~~fd~~~t~~~~gf~~~~~ 283 (388)
T PLN02511 230 ALA----------K-ALRKIFAKHALLFEGL--GGEYNIPL----VANA------KT---VRDFDDGLTRVSFGFKSVDA 283 (388)
T ss_pred HHH----------H-HHHHHHHHHHHHHhhC--CCccCHHH----HHhC------CC---HHHHHHhhhhhcCCCCCHHH
Confidence 000 0 0011111000000000 00000000 0000 00 1111111111 11111001
Q ss_pred ccccccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhH------HH
Q 021530 227 VPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEE------VN 300 (311)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~------~~ 300 (311)
+ |+. ........+|++|||+|+|++|++++..... ..+.+..|+++++++++|||++++|+|+. ++
T Consensus 284 y-y~~--~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~-----~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~ 355 (388)
T PLN02511 284 Y-YSN--SSSSDSIKHVRVPLLCIQAANDPIAPARGIP-----REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTD 355 (388)
T ss_pred H-HHH--cCchhhhccCCCCeEEEEcCCCCcCCcccCc-----HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHH
Confidence 1 110 0111223479999999999999999764321 12344679999999999999999999986 58
Q ss_pred HHHHHHHhh
Q 021530 301 QLVLTFLNK 309 (311)
Q Consensus 301 ~~i~~Fl~~ 309 (311)
+.|.+||..
T Consensus 356 ~~i~~Fl~~ 364 (388)
T PLN02511 356 PVVMEFLEA 364 (388)
T ss_pred HHHHHHHHH
Confidence 999999964
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=7.4e-26 Score=200.44 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=94.1
Q ss_pred CCEEEEEEecCC----CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 021530 12 QGLNLHVAETGT----GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT 87 (311)
Q Consensus 12 ~g~~i~y~~~G~----g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~ 87 (311)
++..++|..+.. ..++|||+||++++...|..++..|.+.+|+|+++|+||||.|+... ...++++.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH-GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCcCHHHHHHHHHHH
Confidence 567888877642 22379999999999999999999998789999999999999998643 2345889999999999
Q ss_pred HHHhCC----CcEEEEEeCcChHHHHHHHHhCCC---ceeeEEEecc
Q 021530 88 LDHLGI----NKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGV 127 (311)
Q Consensus 88 l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 127 (311)
++.++. .+++++||||||.+++.++ .+|+ +++++|+.++
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP 243 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSP 243 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECc
Confidence 998864 3699999999999999766 4664 8999998764
No 43
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4.4e-26 Score=201.08 Aligned_cols=117 Identities=18% Similarity=0.235 Sum_probs=94.2
Q ss_pred CCEEEEEEecCC----CCceEEEECCCCCchhh-------------hHHHHH---HHHHCCcEEEEeCCCCCCCCCCC--
Q 021530 12 QGLNLHVAETGT----GPNVVVFLHGFPEIWYS-------------WRHQMV---AVAAAGFRAIAPDYRGYGLSDPP-- 69 (311)
Q Consensus 12 ~g~~i~y~~~G~----g~~~vvllHG~~~~~~~-------------w~~~~~---~l~~~~~~vi~~Dl~G~G~S~~~-- 69 (311)
+..+++|+++|. +.++||++|++.++++. |+.++. .+...+|.||++|..|-|.|..|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 567899999993 33489999999886643 665543 23334799999999998764321
Q ss_pred ---------C--------CCCcCcHHHHHHHHHHHHHHhCCCcEE-EEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 70 ---------A--------EPEKASFKDITNDLLATLDHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 70 ---------~--------~~~~~~~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+ +...+|+.++++++.++++++++++++ ++||||||++|+.+|.+||++|+++|++++.
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1 112489999999999999999999997 9999999999999999999999999998754
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=3.4e-25 Score=189.16 Aligned_cols=123 Identities=28% Similarity=0.379 Sum_probs=104.6
Q ss_pred eEEEECCEEEEEEecC-C-CC-ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 7 KYIKVQGLNLHVAETG-T-GP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 7 ~~~~~~g~~i~y~~~G-~-g~-~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
.+..++|.+++|..+- . .+ .+||++||+..++.-|..++..|...||.|+++|+||||.|........-++.++.+|
T Consensus 13 ~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~d 92 (298)
T COG2267 13 YFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDD 92 (298)
T ss_pred eeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHH
Confidence 4556699999999875 2 22 3799999999999999999999999999999999999999973222234469999999
Q ss_pred HHHHHHHhCC----CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 84 LLATLDHLGI----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 84 l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
+.++++.... .+++|+||||||.|++.++.+++.+|+++|+.++..
T Consensus 93 l~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 93 LDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred HHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 9999999863 689999999999999999999999999999987543
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1.1e-24 Score=180.98 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=153.1
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----CCcEE
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG----INKVF 97 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~ 97 (311)
..| |++++||+.++...|..+...|..+ +..|+++|+|.||.|... ..++..++|+|+..||+..+ ..++.
T Consensus 51 ~~P-p~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~---~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 51 RAP-PAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI---TVHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCC-ceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc---cccCHHHHHHHHHHHHHHcccccccCCce
Confidence 455 8999999999999999888777654 689999999999999654 34689999999999999985 67899
Q ss_pred EEEeCcCh-HHHHHHHHhCCCceeeEEEeccCCCCCCc--hhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHh
Q 021530 98 LVAKDFGA-RPAYLFALLHPERVSGVITLGVPFIPPGT--AEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYI 174 (311)
Q Consensus 98 lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (311)
++|||||| .+++..++++|+++.++|+++.++...+. ..+.+. ...+......... ....+...+....
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~------i~~m~~~d~~~~~--~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYREL------IKAMIQLDLSIGV--SRGRKEALKSLIE 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHH------HHHHHhccccccc--cccHHHHHHHHHH
Confidence 99999999 88888999999999999998854321111 111100 0111000000000 0001111111000
Q ss_pred hhcCCCCCCCCchhhhhhhccC------CCCCCCC-CCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccce
Q 021530 175 LFSRSEIPIAPENKEIMDLVDA------STPLPPW-LTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPA 247 (311)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 247 (311)
. . .+..++.++.. ......| +.-..+......+...+ +.. .........||
T Consensus 199 ~-~--------~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s--------~~~-----~l~~~~~~~pv 256 (315)
T KOG2382|consen 199 V-G--------FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILS--------YWA-----DLEDGPYTGPV 256 (315)
T ss_pred H-h--------cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhc--------ccc-----cccccccccce
Confidence 0 0 00001111100 0000001 11111111111100000 000 11113578999
Q ss_pred EEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 248 LLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 248 L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
|+|.|.++.+++.+.. .++.+.+|++++++++++|||+|.|+|++|.+.|.+|+..
T Consensus 257 lfi~g~~S~fv~~~~~------~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 257 LFIKGLQSKFVPDEHY------PRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred eEEecCCCCCcChhHH------HHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9999999999975432 3467789999999999999999999999999999999864
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=1.4e-22 Score=176.72 Aligned_cols=119 Identities=18% Similarity=0.294 Sum_probs=91.4
Q ss_pred EECCEEEEEEecCCC-C-ceEEEECCCCCchh-hh-------------------------HHHHHHHHHCCcEEEEeCCC
Q 021530 10 KVQGLNLHVAETGTG-P-NVVVFLHGFPEIWY-SW-------------------------RHQMVAVAAAGFRAIAPDYR 61 (311)
Q Consensus 10 ~~~g~~i~y~~~G~g-~-~~vvllHG~~~~~~-~w-------------------------~~~~~~l~~~~~~vi~~Dl~ 61 (311)
+.+|.+|++..+-.. + .+||++||+++++. .+ ...+..|.+.||+|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 348889998876421 1 27999999998885 11 24577888889999999999
Q ss_pred CCCCCCCCCCCC--cCcHHHHHHHHHHHHHHhC------------------------CCcEEEEEeCcChHHHHHHHHhC
Q 021530 62 GYGLSDPPAEPE--KASFKDITNDLLATLDHLG------------------------INKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 62 G~G~S~~~~~~~--~~~~~~~a~dl~~~l~~l~------------------------~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
|||.|+...... -.+++++++|+.++++... -.+++|+||||||.|++.++..+
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 999997542211 1489999999999998752 13689999999999999999876
Q ss_pred CC--------ceeeEEEeccC
Q 021530 116 PE--------RVSGVITLGVP 128 (311)
Q Consensus 116 p~--------~v~~lvl~~~~ 128 (311)
++ .++++|+++++
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred ccccccccccccceEEEeccc
Confidence 53 58888877654
No 47
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=4.3e-22 Score=173.47 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=82.9
Q ss_pred EEEE-CCEEEE--EEecC---CCCceEEEECCCCCchhh--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCc---
Q 021530 8 YIKV-QGLNLH--VAETG---TGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS--- 76 (311)
Q Consensus 8 ~~~~-~g~~i~--y~~~G---~g~~~vvllHG~~~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~--- 76 (311)
.+++ ||..+. |...+ ...|+||++||++++... +..++..|.+.||+|+++|+||||.|.... ...|+
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~~~~ 113 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYHSGE 113 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceECCCc
Confidence 4555 776554 32222 112389999999887543 445777888889999999999999874321 12222
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCc--eeeEEEeccCC
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPER--VSGVITLGVPF 129 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~ 129 (311)
.++..+.+..+.++++.++++++||||||.++..+++.+++. +.+++++++|+
T Consensus 114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 333333333344456778999999999999999888887654 88999888764
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=7.6e-22 Score=176.29 Aligned_cols=228 Identities=18% Similarity=0.179 Sum_probs=137.8
Q ss_pred CCEEEEEE-ec--CCCCceEEEEC-CCCCc-hhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 021530 12 QGLNLHVA-ET--GTGPNVVVFLH-GFPEI-WYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLA 86 (311)
Q Consensus 12 ~g~~i~y~-~~--G~g~~~vvllH-G~~~~-~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ 86 (311)
+|.++... .. +.++.|+|++| |+.+. ...|......|.+.||+|+++|+||||.|.... .......+.+++.+
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld 254 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLN 254 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHH
Confidence 55456532 22 22332444455 54443 346877777888889999999999999996532 12344455567777
Q ss_pred HHHHh---CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcC
Q 021530 87 TLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRH 163 (311)
Q Consensus 87 ~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (311)
.+... +.+++.++||||||.+|+.+|..+|++++++|+++++.... +.. ..+.. .
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~--------~~~----~~~~~---------~- 312 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL--------LTD----PKRQQ---------Q- 312 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh--------hcc----hhhhh---------h-
Confidence 77665 56899999999999999999999999999999987543110 000 00000 0
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCcc
Q 021530 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 243 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (311)
........+. .. +.. ...+.+.+......+. +.. . .....++
T Consensus 313 -~p~~~~~~la--~~---------------lg~-----~~~~~~~l~~~l~~~s-------l~~------~--~~l~~~i 354 (414)
T PRK05077 313 -VPEMYLDVLA--SR---------------LGM-----HDASDEALRVELNRYS-------LKV------Q--GLLGRRC 354 (414)
T ss_pred -chHHHHHHHH--HH---------------hCC-----CCCChHHHHHHhhhcc-------chh------h--hhhccCC
Confidence 0000000000 00 000 0001111111000000 000 0 0001268
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhC
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~ 310 (311)
++|+|+|+|++|.++|.+.. +.+.+..|++++++++++ ++.|.++++++.|.+||.++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a------~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDS------RLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCcEEEEecCCCCCCCHHHH------HHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 99999999999999986543 234566799999999986 67789999999999999865
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=3.5e-21 Score=163.75 Aligned_cols=113 Identities=26% Similarity=0.324 Sum_probs=86.1
Q ss_pred EECCEEEE-EEecC---CCCceEEEECCCCC----chhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHH
Q 021530 10 KVQGLNLH-VAETG---TGPNVVVFLHGFPE----IWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDIT 81 (311)
Q Consensus 10 ~~~g~~i~-y~~~G---~g~~~vvllHG~~~----~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (311)
..+|.++. +.... +++ +||++||++. +...|..++..|.+.||+|+++|+||||.|... .++++++.
T Consensus 8 ~~~~~~l~g~~~~p~~~~~~-~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~ 82 (274)
T TIGR03100 8 SCEGETLVGVLHIPGASHTT-GVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGID 82 (274)
T ss_pred EcCCcEEEEEEEcCCCCCCC-eEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHH
Confidence 34665554 33222 334 7888998764 334466667788777999999999999999642 25777888
Q ss_pred HHHHHHHHHh-----CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 82 NDLLATLDHL-----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 82 ~dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++.
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~ 133 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPW 133 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCc
Confidence 8988888887 67889999999999999999875 5789999999754
No 50
>PLN02872 triacylglycerol lipase
Probab=99.88 E-value=1.8e-21 Score=171.86 Aligned_cols=290 Identities=18% Similarity=0.204 Sum_probs=157.8
Q ss_pred cceeEEEE-CCEEEEEEecC---------CCCceEEEECCCCCchhhhH------HHHHHHHHCCcEEEEeCCCCCCCCC
Q 021530 4 IEHKYIKV-QGLNLHVAETG---------TGPNVVVFLHGFPEIWYSWR------HQMVAVAAAGFRAIAPDYRGYGLSD 67 (311)
Q Consensus 4 ~~~~~~~~-~g~~i~y~~~G---------~g~~~vvllHG~~~~~~~w~------~~~~~l~~~~~~vi~~Dl~G~G~S~ 67 (311)
.+..++++ ||+.+...... .++ +|||+||++.++..|. .+...|.+.||+|+++|+||+|.|.
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~-~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGP-PVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCC-eEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 34566777 99988866532 134 8999999999988884 2333466679999999999998763
Q ss_pred C----C---CCCCcCcHHHHH-HHHHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCC---ceeeEEEeccCCCCCC
Q 021530 68 P----P---AEPEKASFKDIT-NDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVPFIPPG 133 (311)
Q Consensus 68 ~----~---~~~~~~~~~~~a-~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~ 133 (311)
. . .....+++++++ .|+.+++|.+ ..++++++||||||.+++. ++.+|+ +|++++++++......
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~-~~~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLA-ALTQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHH-HhhChHHHHHHHHHHHhcchhhhcc
Confidence 2 1 111257999999 7999999986 3479999999999999984 446787 5777777764321111
Q ss_pred -chhhhhcCCchhhHhhhc-CccccccccC-cCc-HHHH----------HHHHHhhhcCCCCCCCCchhhhhhhccCCCC
Q 021530 134 -TAEFHKSLPEGFYISRWQ-EPGRAEADFG-RHD-AKTV----------VRNIYILFSRSEIPIAPENKEIMDLVDASTP 199 (311)
Q Consensus 134 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (311)
...+...+... ....+. ..+. .++. ... .... .......+.+... .-+......+-. .
T Consensus 202 ~~~~~~~~~~~~-~~~~~~~~~g~--~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~---~~n~~~~~~~~~--~ 273 (395)
T PLN02872 202 VTAPLVLRMVFM-HLDQMVVAMGI--HQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNC---CFNASRIDYYLE--Y 273 (395)
T ss_pred CCCHHHHHHHHH-hHHHHHHHhcC--ceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCc---ccchhhhhHHHh--c
Confidence 11110000000 000000 0000 0000 000 0000 1110011111100 000000000000 0
Q ss_pred CCCCCCHHHHHHHHHHHccCCCC---cc--ccc-cccccccccCCCCCcc--ccceEEEeeCCcccCCCCCchhhhhccc
Q 021530 200 LPPWLTAEDLATYGALYEKSGFR---TA--LQV-PYRSIHEKFSLPELTV--KVPALLILGEKDYFLKFPGIEDYIRSGK 271 (311)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~-~~~~~~~~~~~~~~~i--~~P~L~i~G~~D~~~~~~~~~~~~~~~~ 271 (311)
.|...+-..+..+.+.+....|. .. .+. .|.... ...-...++ ++|+++++|++|.++++..+. .
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~-pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~------~ 346 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVN-PPAFDLSLIPKSLPLWMGYGGTDGLADVTDVE------H 346 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCC-CCCcCcccCCCCccEEEEEcCCCCCCCHHHHH------H
Confidence 12223334444555544322221 11 011 011100 111122344 689999999999998754432 2
Q ss_pred ccccCCC-eEEEEeCCCCCC---ccccChhHHHHHHHHHHhhC
Q 021530 272 VKDFVPN-LEIIRLSEGSHF---VQEQSPEEVNQLVLTFLNKH 310 (311)
Q Consensus 272 l~~~~~~-~~~~~i~~~gH~---~~~e~p~~~~~~i~~Fl~~~ 310 (311)
+.+.+|+ .+++.++++||. ...|+|+++.+.|.+|+++.
T Consensus 347 l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 347 TLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 3445565 789999999995 45699999999999999764
No 51
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.88 E-value=1.3e-21 Score=152.66 Aligned_cols=224 Identities=19% Similarity=0.250 Sum_probs=138.7
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHH---HHHHhCCCcEEEEEeC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLA---TLDHLGINKVFLVAKD 102 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~---~l~~l~~~~~~lvGhS 102 (311)
..|||||||.++.++.+.+...|.+.||.|.+|.+||||-.... --.++.+++-+|+.+ .|...|.+.+.++|-|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 38999999999999999999999988999999999999977421 124566666555554 4555578999999999
Q ss_pred cChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCC
Q 021530 103 FGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIP 182 (311)
Q Consensus 103 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (311)
|||.+|+.+|..+| ++++|.+++|.....-... -+.+. .+. +..+.+...+. ..+++
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~i----ie~~l--~y~---~~~kk~e~k~~-e~~~~----------- 150 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRII----IEGLL--EYF---RNAKKYEGKDQ-EQIDK----------- 150 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccchhh----hHHHH--HHH---HHhhhccCCCH-HHHHH-----------
Confidence 99999999999998 8999999876432110000 00000 000 00000000000 00000
Q ss_pred CCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCC
Q 021530 183 IAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPG 262 (311)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~ 262 (311)
+... +.. .+. ....++...+ +.. ......|..|+++++|++|+.++...
T Consensus 151 ------e~~~-~~~-----~~~--~~~~~~~~~i-------------~~~----~~~~~~I~~pt~vvq~~~D~mv~~~s 199 (243)
T COG1647 151 ------EMKS-YKD-----TPM--TTTAQLKKLI-------------KDA----RRSLDKIYSPTLVVQGRQDEMVPAES 199 (243)
T ss_pred ------HHHH-hhc-----chH--HHHHHHHHHH-------------HHH----HhhhhhcccchhheecccCCCCCHHH
Confidence 0000 000 000 0011111111 101 11112689999999999999997654
Q ss_pred chhhhhcccccccCCCeEEEEeCCCCCCc-cccChhHHHHHHHHHHhh
Q 021530 263 IEDYIRSGKVKDFVPNLEIIRLSEGSHFV-QEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~~ 309 (311)
..-... ......-++++++++||-+ +-++-|.+.+.|.+||++
T Consensus 200 A~~Iy~----~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 200 ANFIYD----HVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHH----hccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 432111 1123458999999999966 556789999999999974
No 52
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.88 E-value=2.8e-21 Score=175.28 Aligned_cols=253 Identities=14% Similarity=0.120 Sum_probs=145.1
Q ss_pred eEEEECCCCCchhhhH-----HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 27 VVVFLHGFPEIWYSWR-----HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~-----~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
|||++||+....+.|+ .++..|.+.||+|+++|++|+|.|......++|..+.+.+.+..+++.+|.++++++||
T Consensus 190 PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~ 269 (532)
T TIGR01838 190 PLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGY 269 (532)
T ss_pred cEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 8999999999988886 57888888899999999999999976543445777777888888888899999999999
Q ss_pred CcChHHH---H-HHHHhC-CCceeeEEEeccCCCCCCchhhhhcCCchhh---HhhhcC----ccc-cccccCcCcHHHH
Q 021530 102 DFGARPA---Y-LFALLH-PERVSGVITLGVPFIPPGTAEFHKSLPEGFY---ISRWQE----PGR-AEADFGRHDAKTV 168 (311)
Q Consensus 102 S~Gg~ia---~-~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~-~~~~~~~~~~~~~ 168 (311)
||||.++ + .+++.+ |++|+++++++++.....+..+.....+... ...... ++. ....|......+.
T Consensus 270 cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l 349 (532)
T TIGR01838 270 CIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDL 349 (532)
T ss_pred CcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhH
Confidence 9999985 2 356665 8899999999876432222111100000000 000000 000 0000000000011
Q ss_pred HHHHHh-hh-cCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHH-HHHccCCCCccccccccccccccCCCCCcccc
Q 021530 169 VRNIYI-LF-SRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYG-ALYEKSGFRTALQVPYRSIHEKFSLPELTVKV 245 (311)
Q Consensus 169 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (311)
+...+. .+ .+...+ . -++..+.... ..+......++. ..+..+.+.. ..+ . ..........|++
T Consensus 350 ~w~~~v~~yl~g~~~~-~---fdll~Wn~D~----t~lP~~~~~~~lr~ly~~N~L~~-G~~--~--v~g~~~dL~~I~v 416 (532)
T TIGR01838 350 IWNYYVDNYLKGKSPV-P---FDLLFWNSDS----TNLPGKMHNFYLRNLYLQNALTT-GGL--E--VCGVRLDLSKVKV 416 (532)
T ss_pred HHHHHHHHHhcCCCcc-c---hhHHHHhccC----ccchHHHHHHHHHHHHhcCCCcC-Cee--E--ECCEecchhhCCC
Confidence 000000 00 111110 0 0111111111 122333333333 2232222211 111 0 0111123347999
Q ss_pred ceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhH
Q 021530 246 PALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEE 298 (311)
Q Consensus 246 P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~ 298 (311)
|+|+|+|++|.++|...+. .+.+.+++.+..+++++||.+++|+|..
T Consensus 417 PvLvV~G~~D~IvP~~sa~------~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 417 PVYIIATREDHIAPWQSAY------RGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CEEEEeeCCCCcCCHHHHH------HHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 9999999999999764332 3455678899999999999999999863
No 53
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=4.3e-21 Score=157.12 Aligned_cols=121 Identities=26% Similarity=0.393 Sum_probs=98.4
Q ss_pred eeEEEE-CCEEEEEEecC--CC-Cc--eEEEECCCCCch-hhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHH
Q 021530 6 HKYIKV-QGLNLHVAETG--TG-PN--VVVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFK 78 (311)
Q Consensus 6 ~~~~~~-~g~~i~y~~~G--~g-~~--~vvllHG~~~~~-~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 78 (311)
..+++. +|.++.+.-+- ++ +| .|+++||+++.+ ..|...+..|...||-|+++|++|||.|+... ..-.+++
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-~yi~~~d 107 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-AYVPSFD 107 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc-ccCCcHH
Confidence 344444 88888887664 22 32 599999998865 66777778888889999999999999999653 2345999
Q ss_pred HHHHHHHHHHHHhCC------CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 79 DITNDLLATLDHLGI------NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
..++|+.++.+.... .+.+|+||||||.|++.++.++|+..+++|++++
T Consensus 108 ~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaP 162 (313)
T KOG1455|consen 108 LVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAP 162 (313)
T ss_pred HHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeec
Confidence 999999999986432 3689999999999999999999999999998874
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=2.2e-20 Score=156.45 Aligned_cols=115 Identities=42% Similarity=0.682 Sum_probs=94.3
Q ss_pred EECCEEEEEEecCCCCceEEEECCCCCchhhhHHHHHHHHHC--CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 021530 10 KVQGLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT 87 (311)
Q Consensus 10 ~~~g~~i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~ 87 (311)
...+..+.|...|.+.++|+++||++++...|......+... .|+|+++|+||||.|. .. .++...+++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHHHH
Confidence 335667888877753338999999999999998733333332 2899999999999997 11 34566669999999
Q ss_pred HHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 88 LDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 88 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++.+++.+++++||||||.+++.++.++|++++++++++.+
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 99999999999999999999999999999999999998854
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.87 E-value=1.2e-23 Score=174.07 Aligned_cols=76 Identities=34% Similarity=0.526 Sum_probs=70.0
Q ss_pred cEEEEeCCCCCCCCCC--CCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 53 FRAIAPDYRGYGLSDP--PAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 53 ~~vi~~Dl~G~G~S~~--~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
|+||++|+||+|.|++ ......|+.+++++++..+++++++++++++||||||.+++.+|+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999995 133467999999999999999999999999999999999999999999999999998764
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=5.7e-21 Score=153.07 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=72.7
Q ss_pred ceEEEECCCCCchhhhHHH-H-HHHHH--CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 26 NVVVFLHGFPEIWYSWRHQ-M-VAVAA--AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~-~-~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
|+|||+|||+++...|... + ..+.+ .+|+|+++|+|||| +++++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 3899999999999999842 2 34433 26999999999985 368889999999999999999999
Q ss_pred CcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 102 DFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 102 S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
||||.+++.+|.++|. ++|+++++
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCC
Confidence 9999999999999994 45767643
No 57
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.86 E-value=1.3e-20 Score=151.71 Aligned_cols=102 Identities=24% Similarity=0.360 Sum_probs=87.1
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC---CCcEEE
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG---INKVFL 98 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~l 98 (311)
.|| .++++||++.|.-.|..+...+..+ ..+|+|+|+||||.|.... .++.+.+.++.|+.++++++= ..++.|
T Consensus 73 ~gp-il~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~-e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 73 EGP-ILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN-EDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred Ccc-EEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC-hhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 466 8999999999999999988888754 6888999999999997643 356899999999999999973 568999
Q ss_pred EEeCcChHHHHHHHHh--CCCceeeEEEecc
Q 021530 99 VAKDFGARPAYLFALL--HPERVSGVITLGV 127 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~ 127 (311)
|||||||.||.+.|.. -|. +.+|+.++.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 9999999999887663 576 899998874
No 58
>PRK10566 esterase; Provisional
Probab=99.86 E-value=8.3e-20 Score=153.40 Aligned_cols=101 Identities=23% Similarity=0.238 Sum_probs=71.3
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCc-----HHHHHHHHHHHHHH------hCCC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKAS-----FKDITNDLLATLDH------LGIN 94 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~-----~~~~a~dl~~~l~~------l~~~ 94 (311)
|+||++||++++...|......|.+.||+|+++|+||||.|.........+ +..-.+|+.++++. ++.+
T Consensus 28 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 107 (249)
T PRK10566 28 PTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDD 107 (249)
T ss_pred CEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCcc
Confidence 389999999999888988888888779999999999999864221111110 11123344333333 2346
Q ss_pred cEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 95 KVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 95 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
++.++|||+||.+++.+++++|+....+++++
T Consensus 108 ~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 108 RLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred ceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 89999999999999999999987544444443
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.85 E-value=5.6e-20 Score=161.93 Aligned_cols=99 Identities=14% Similarity=0.168 Sum_probs=81.2
Q ss_pred eEEEECCCCCchhhh-----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH-----HHHHHHHhCCCcE
Q 021530 27 VVVFLHGFPEIWYSW-----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND-----LLATLDHLGINKV 96 (311)
Q Consensus 27 ~vvllHG~~~~~~~w-----~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d-----l~~~l~~l~~~~~ 96 (311)
|||++||+..+.+.| ..++..|.+.||+|+++|++|+|.|+. .+++++++++ +..+++..+.+++
T Consensus 64 pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 64 PLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred cEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 799999987666655 468888888899999999999998853 2466666533 4445666788999
Q ss_pred EEEEeCcChHHHHHHHHhCCCceeeEEEeccCCC
Q 021530 97 FLVAKDFGARPAYLFALLHPERVSGVITLGVPFI 130 (311)
Q Consensus 97 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 130 (311)
+++||||||.+++.+++.+|++|+++|+++++..
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred cEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 9999999999999999999999999999987643
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.83 E-value=1.6e-19 Score=178.30 Aligned_cols=103 Identities=21% Similarity=0.314 Sum_probs=82.7
Q ss_pred CCCceEEEECCCCCchhhhHHH-----HHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH---hCCC
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQ-----MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH---LGIN 94 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~-----~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~---l~~~ 94 (311)
.++ ||||||||+.+.+.|+.+ ++.|.+.||+|+++| +|.|+.+.....+++.+++..+.+.++. +..+
T Consensus 66 ~~~-plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGP-PVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCC-cEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 455 999999999999999965 778878789999999 5777764322236777777777766665 3457
Q ss_pred cEEEEEeCcChHHHHHHHHhC-CCceeeEEEeccCC
Q 021530 95 KVFLVAKDFGARPAYLFALLH-PERVSGVITLGVPF 129 (311)
Q Consensus 95 ~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~ 129 (311)
+++|+||||||.+++.+|+.+ |++|+++|+++++.
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 899999999999999998865 56899999988764
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.80 E-value=1.9e-18 Score=145.43 Aligned_cols=116 Identities=25% Similarity=0.248 Sum_probs=84.9
Q ss_pred eEEEE-CCEEEEEE-ecCC--C---CceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCC-CCCCCCCCCCcCcHH
Q 021530 7 KYIKV-QGLNLHVA-ETGT--G---PNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPPAEPEKASFK 78 (311)
Q Consensus 7 ~~~~~-~g~~i~y~-~~G~--g---~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~~~~~~~~~~ 78 (311)
+.+.+ +|.+|.-+ +... . .++||++||++++...+...+..|.+.||.|+.+|.||| |.|+..- ...++.
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s 89 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMS 89 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCccc
Confidence 35566 88888843 3331 1 137999999999887788888899989999999999998 9996532 233444
Q ss_pred HHHHHHHH---HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 79 DITNDLLA---TLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 79 ~~a~dl~~---~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
...+|+.. +++..+.+++.|+||||||.+|+..|... +++.+|+.+
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~s 138 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAV 138 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcC
Confidence 45667744 44445677899999999999997777643 388888655
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.80 E-value=1.5e-18 Score=145.15 Aligned_cols=100 Identities=26% Similarity=0.196 Sum_probs=83.6
Q ss_pred ceEEEECCCCCc----hhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH---HHHhCCCcEEE
Q 021530 26 NVVVFLHGFPEI----WYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT---LDHLGINKVFL 98 (311)
Q Consensus 26 ~~vvllHG~~~~----~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~---l~~l~~~~~~l 98 (311)
++|||+||++++ ...|..++..|.+.+|+|+++|+||||.|+... ..+++..+++|+.++ +++++.++++|
T Consensus 26 ~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 26 GVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred eEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 379999999864 345777778887779999999999999997543 346788888887764 55567889999
Q ss_pred EEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 99 VAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+||||||.+++.+|.++|++++++|++++
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P 132 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQP 132 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEecc
Confidence 99999999999999999999999999874
No 63
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=3.9e-18 Score=142.47 Aligned_cols=118 Identities=25% Similarity=0.408 Sum_probs=100.3
Q ss_pred EEECCEEEEEEecC-C----C--CceEEEECCCCCchhhhHHHHHHHHHC---------CcEEEEeCCCCCCCCCCCCCC
Q 021530 9 IKVQGLNLHVAETG-T----G--PNVVVFLHGFPEIWYSWRHQMVAVAAA---------GFRAIAPDYRGYGLSDPPAEP 72 (311)
Q Consensus 9 ~~~~g~~i~y~~~G-~----g--~~~vvllHG~~~~~~~w~~~~~~l~~~---------~~~vi~~Dl~G~G~S~~~~~~ 72 (311)
.++.|.+||+...- . + .-||+++||||+|-..|-..++.|.+. .|.||+|.+||||-|+.+..
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk- 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK- 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-
Confidence 34589999987553 1 1 128999999999999988888776543 27999999999999998754
Q ss_pred CcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 73 EKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 73 ~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
...+..+.|.-+..+|-.||.+++.+-|-+||+.|+..+|..||++|.++-+-.+
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 4688889999999999999999999999999999999999999999999986444
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.73 E-value=8.2e-17 Score=123.58 Aligned_cols=92 Identities=27% Similarity=0.397 Sum_probs=74.9
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
+||++||++++...|......|.+.||.|+.+|+||+|.+.. .....++.+++. .+..+.+++.|+|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-----ADAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-----SHHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-----hHHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 599999999999999999999998899999999999998832 113333333332 1123778999999999999
Q ss_pred HHHHHHHhCCCceeeEEEec
Q 021530 107 PAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 107 ia~~~a~~~p~~v~~lvl~~ 126 (311)
+++.++..+ .+++++|+++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~ 92 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLS 92 (145)
T ss_dssp HHHHHHHHS-TTESEEEEES
T ss_pred HHHHHhhhc-cceeEEEEec
Confidence 999999998 7899999886
No 65
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.71 E-value=1.3e-16 Score=141.06 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=80.9
Q ss_pred CCCceEEEECCCCCch--hhhHH-HHHHHHH--CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh------
Q 021530 23 TGPNVVVFLHGFPEIW--YSWRH-QMVAVAA--AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL------ 91 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~--~~w~~-~~~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------ 91 (311)
+++ ++|+||||.++. ..|.. +...+.. ..|+||++|++|+|.|..+.. .. ....+++++.++++.|
T Consensus 40 ~~p-tvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~-~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 40 ETK-TFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AA-YTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCC-eEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-cc-cHHHHHHHHHHHHHHHHHhhCC
Confidence 455 999999998653 45775 3444442 259999999999999865432 22 3467778888888765
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 92 GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++++++||||||||.||..++..+|++|.++++++++
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 4789999999999999999999999999999999863
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.70 E-value=6.6e-16 Score=127.91 Aligned_cols=101 Identities=18% Similarity=0.110 Sum_probs=67.4
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC---------CCcC---cHHHHHHHHHH----HHH
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE---------PEKA---SFKDITNDLLA----TLD 89 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---------~~~~---~~~~~a~dl~~----~l~ 89 (311)
+.|||+||++++...|..+.+.|.+..+.+..++++|+..+..... .... ++.+..+.+.+ +.+
T Consensus 17 ~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 96 (232)
T PRK11460 17 QLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQQ 96 (232)
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999988876555555666666543321100 0001 12222333333 334
Q ss_pred HhCC--CcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 90 HLGI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 90 ~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
++++ ++++|+|||+||.+++.+++.+|+.+.+++.++
T Consensus 97 ~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~s 135 (232)
T PRK11460 97 QSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFS 135 (232)
T ss_pred hcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEec
Confidence 4455 579999999999999999999998877776553
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.70 E-value=8.2e-16 Score=119.56 Aligned_cols=222 Identities=18% Similarity=0.242 Sum_probs=134.1
Q ss_pred ecCCCCceEEEECCCCCchhh--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-Cc-
Q 021530 20 ETGTGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NK- 95 (311)
Q Consensus 20 ~~G~g~~~vvllHG~~~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~- 95 (311)
+.|+.. .||++|||-++... ...++.++.+.++.++.+|++|.|.|+..-....|+ ..|+|+..+++.+.- .+
T Consensus 29 ~tgs~e-~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~--~eadDL~sV~q~~s~~nr~ 105 (269)
T KOG4667|consen 29 ETGSTE-IVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN--TEADDLHSVIQYFSNSNRV 105 (269)
T ss_pred ccCCce-EEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc--chHHHHHHHHHHhccCceE
Confidence 345555 89999999876653 445666777779999999999999998765445555 446999999998843 33
Q ss_pred -EEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHh
Q 021530 96 -VFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYI 174 (311)
Q Consensus 96 -~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (311)
.+++|||-||-+++.||.++++ ++-+|-++..+...+ .+.+.+.+. ....++. .
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~--~I~eRlg~~--------------------~l~~ike--~ 160 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN--GINERLGED--------------------YLERIKE--Q 160 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc--chhhhhccc--------------------HHHHHHh--C
Confidence 5789999999999999999988 555554443222110 000001111 0011110 0
Q ss_pred hhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCC
Q 021530 175 LFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEK 254 (311)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~ 254 (311)
- +++.-......+..++++.+..... .. ..+. ......+||||-++|..
T Consensus 161 G--------------fid~~~rkG~y~~rvt~eSlmdrLn----td-----------~h~a--clkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 161 G--------------FIDVGPRKGKYGYRVTEESLMDRLN----TD-----------IHEA--CLKIDKQCRVLTVHGSE 209 (269)
T ss_pred C--------------ceecCcccCCcCceecHHHHHHHHh----ch-----------hhhh--hcCcCccCceEEEeccC
Confidence 0 0000000001122234443322110 00 0000 11125789999999999
Q ss_pred cccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHH
Q 021530 255 DYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFL 307 (311)
Q Consensus 255 D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 307 (311)
|.++|.+.. +.+++.+|+.++++|+|+-|.....+- ..+....+|.
T Consensus 210 D~IVPve~A------kefAk~i~nH~L~iIEgADHnyt~~q~-~l~~lgl~f~ 255 (269)
T KOG4667|consen 210 DEIVPVEDA------KEFAKIIPNHKLEIIEGADHNYTGHQS-QLVSLGLEFI 255 (269)
T ss_pred CceeechhH------HHHHHhccCCceEEecCCCcCccchhh-hHhhhcceeE
Confidence 999987654 346678899999999999998765433 3444555554
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=1.8e-15 Score=129.15 Aligned_cols=117 Identities=20% Similarity=0.265 Sum_probs=81.0
Q ss_pred CCEEEEEEec------CCCCceEEEECCCCCchhhhHHH---HHHHHHCCcEEEEeCCCCCCC-----CCC---------
Q 021530 12 QGLNLHVAET------GTGPNVVVFLHGFPEIWYSWRHQ---MVAVAAAGFRAIAPDYRGYGL-----SDP--------- 68 (311)
Q Consensus 12 ~g~~i~y~~~------G~g~~~vvllHG~~~~~~~w~~~---~~~l~~~~~~vi~~Dl~G~G~-----S~~--------- 68 (311)
.|..+.|..+ +.+-|+|+|+||++++...|... ...+...++.||+||.+++|. ++.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 3445666554 22224899999999988877542 234445589999999987761 110
Q ss_pred ----CC------CCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 69 ----PA------EPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 69 ----~~------~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
.. ....+-.+++.+.+.++++.++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 00 0001224445555666666678899999999999999999999999999999887753
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.69 E-value=4e-15 Score=126.66 Aligned_cols=103 Identities=21% Similarity=0.300 Sum_probs=76.9
Q ss_pred ceEEEECCCCCchhhhHH--HHHHHHH-CCcEEEEeCC--CCCCCCCCC------------------CCCCcCcHHHH-H
Q 021530 26 NVVVFLHGFPEIWYSWRH--QMVAVAA-AGFRAIAPDY--RGYGLSDPP------------------AEPEKASFKDI-T 81 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~--~~~~l~~-~~~~vi~~Dl--~G~G~S~~~------------------~~~~~~~~~~~-a 81 (311)
|+|+|+||++++...|.. .+..+.+ .++.||+||. +|+|.|... +....+++.++ +
T Consensus 43 P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~ 122 (275)
T TIGR02821 43 PVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIV 122 (275)
T ss_pred CEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHH
Confidence 389999999999988853 2344543 4799999998 666544311 00112444444 7
Q ss_pred HHHHHHHHH---hCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 82 NDLLATLDH---LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 82 ~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+++..++++ ++.+++.++||||||.+|+.+++++|+++++++++++.
T Consensus 123 ~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 123 QELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 888888887 45578999999999999999999999999999987643
No 70
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-15 Score=128.10 Aligned_cols=117 Identities=22% Similarity=0.335 Sum_probs=90.6
Q ss_pred CCEEEEEEecC--CC--CceEEEECCCCCchhh----------hHH-HHH---HHHHCCcEEEEeCCCCCC-CCCCCC--
Q 021530 12 QGLNLHVAETG--TG--PNVVVFLHGFPEIWYS----------WRH-QMV---AVAAAGFRAIAPDYRGYG-LSDPPA-- 70 (311)
Q Consensus 12 ~g~~i~y~~~G--~g--~~~vvllHG~~~~~~~----------w~~-~~~---~l~~~~~~vi~~Dl~G~G-~S~~~~-- 70 (311)
++..|.|+++| +. .+.||++||+.++++. |-. ++. ++...+|.||+.|-.|.+ .|..|.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 57789999999 32 3489999999885552 332 221 233346999999999987 343331
Q ss_pred CC---------CcCcHHHHHHHHHHHHHHhCCCcEE-EEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 71 EP---------EKASFKDITNDLLATLDHLGINKVF-LVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 71 ~~---------~~~~~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++ ..+|+.+++..-..++|+|||+++. +||-||||+.|+..+..|||+|.+++.++++
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 11 2478889988888899999999975 9999999999999999999999999998864
No 71
>PLN00021 chlorophyllase
Probab=99.68 E-value=4e-15 Score=127.83 Aligned_cols=101 Identities=26% Similarity=0.351 Sum_probs=73.0
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-------hCCCc
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-------LGINK 95 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-------l~~~~ 95 (311)
+.| +|||+||++.+...|..++..|.+.||.|+++|++|++.+.... .-.+..+..+.+.+.++. .+.++
T Consensus 51 ~~P-vVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 51 TYP-VLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCC-EEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 445 89999999999888998888988878999999999976442111 111222233333332222 34578
Q ss_pred EEEEEeCcChHHHHHHHHhCCC-----ceeeEEEec
Q 021530 96 VFLVAKDFGARPAYLFALLHPE-----RVSGVITLG 126 (311)
Q Consensus 96 ~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~ 126 (311)
+.++||||||.+|+.+|..+|+ +++++++++
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeec
Confidence 9999999999999999999985 567777665
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.67 E-value=3e-14 Score=116.13 Aligned_cols=269 Identities=21% Similarity=0.300 Sum_probs=157.6
Q ss_pred eeEEEECCEEEEEEecC--C-CCceEEEECCCCCchhh-hHHHH-----HHHHHCCcEEEEeCCCCCCCCCCCCCC--Cc
Q 021530 6 HKYIKVQGLNLHVAETG--T-GPNVVVFLHGFPEIWYS-WRHQM-----VAVAAAGFRAIAPDYRGYGLSDPPAEP--EK 74 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G--~-g~~~vvllHG~~~~~~~-w~~~~-----~~l~~~~~~vi~~Dl~G~G~S~~~~~~--~~ 74 (311)
+..+++.-..+++.+.| + ++|++|=.|..+.++.. |...+ ..+.+ +|.|+-+|.||+-.-.+.... ..
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCCCC
Confidence 44555543468888888 3 23378889999888776 55433 35555 599999999999776553222 24
Q ss_pred CcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCC-chh-hhhcCCchhhHhhhcC
Q 021530 75 ASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPG-TAE-FHKSLPEGFYISRWQE 152 (311)
Q Consensus 75 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 152 (311)
.|++++|++|..+++.++++.+.=+|---|+.|-.+||+.||+||.+|||+++-....+ ..+ +.+......+...+
T Consensus 103 Psmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gm-- 180 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGM-- 180 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhch--
Confidence 59999999999999999999999999999999999999999999999999986322211 000 00000000000000
Q ss_pred ccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccc
Q 021530 153 PGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSI 232 (311)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
.....+++- ++-|.+.... .+.++....... ......+..+..+..++.. +..+..
T Consensus 181 ---------t~~~~d~ll--~H~Fg~e~~~---~~~diVq~Yr~~--l~~~~N~~Nl~~fl~ayn~---R~DL~~----- 236 (326)
T KOG2931|consen 181 ---------TQGVKDYLL--AHHFGKEELG---NNSDIVQEYRQH--LGERLNPKNLALFLNAYNG---RRDLSI----- 236 (326)
T ss_pred ---------hhhHHHHHH--HHHhcccccc---ccHHHHHHHHHH--HHhcCChhHHHHHHHHhcC---CCCccc-----
Confidence 001112211 1222222111 111111100000 0001122222223222211 000000
Q ss_pred ccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 233 HEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 233 ~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
........++||||++.|++.+.+. .+.+. ...+. -.+.++..+.+||=.+..|+|.++++.++=|+..
T Consensus 237 --~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~--n~~Ld--p~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 237 --ERPKLGTTLKCPVLLVVGDNSPHVS--AVVEC--NSKLD--PTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred --cCCCcCccccccEEEEecCCCchhh--hhhhh--hcccC--cccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 0000111678999999999998763 22111 11222 2469999999999999999999999999999863
No 73
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.65 E-value=3.7e-16 Score=132.41 Aligned_cols=113 Identities=18% Similarity=0.264 Sum_probs=83.3
Q ss_pred CEEEEEEecC-CCCceEEEECCCCCch-hhhHHHHH-HHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH
Q 021530 13 GLNLHVAETG-TGPNVVVFLHGFPEIW-YSWRHQMV-AVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (311)
Q Consensus 13 g~~i~y~~~G-~g~~~vvllHG~~~~~-~~w~~~~~-~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l 88 (311)
+..+.+.... +++ ++|+||||+++. ..|...+. .+++ .+++||++|++|++.+..+. ..+++...++++.+++
T Consensus 24 ~~~~~~~~f~~~~p-~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l 100 (275)
T cd00707 24 PSSLKNSNFNPSRP-TRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFL 100 (275)
T ss_pred hhhhhhcCCCCCCC-cEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHH
Confidence 3445555555 345 899999999887 67765443 3443 47999999999985433211 2345556666777666
Q ss_pred HHh------CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 89 DHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 89 ~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+.+ +.++++||||||||.||..++..+|++|.+++.++++
T Consensus 101 ~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 101 DFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 664 4578999999999999999999999999999999853
No 74
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.65 E-value=5.1e-15 Score=122.30 Aligned_cols=263 Identities=19% Similarity=0.285 Sum_probs=139.3
Q ss_pred eEEEECCEEEEEEecCC-C--CceEEEECCCCCchhh-hHHHH-----HHHHHCCcEEEEeCCCCCCCCCCCCCCC--cC
Q 021530 7 KYIKVQGLNLHVAETGT-G--PNVVVFLHGFPEIWYS-WRHQM-----VAVAAAGFRAIAPDYRGYGLSDPPAEPE--KA 75 (311)
Q Consensus 7 ~~~~~~g~~i~y~~~G~-g--~~~vvllHG~~~~~~~-w~~~~-----~~l~~~~~~vi~~Dl~G~G~S~~~~~~~--~~ 75 (311)
+.+++.-..+++...|+ . .|++|=.|-.+.|... |...+ ..+. ++|-++=+|.||+..-+...+.+ ..
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccccccccccc
Confidence 45777767899998882 2 3489999999988877 66543 3444 47999999999999876543222 35
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCc-hhhhhcCCchhhHhhhcCcc
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGT-AEFHKSLPEGFYISRWQEPG 154 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (311)
|++++|+++.++++.++++.++-+|---|+.|-.+||..||++|.+|||+++.....+- .+.. . ....|....
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~----~--K~~~~~L~~ 154 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFY----Q--KLSSWLLYS 154 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHH----H--HHH------
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHH----H--HHhcccccc
Confidence 99999999999999999999999999999999999999999999999999853221110 0000 0 000000000
Q ss_pred ccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccccccccc
Q 021530 155 RAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHE 234 (311)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
.. .....++.+- ++-|+.... ..+.+........ ......+..+..|...+ ..
T Consensus 155 ---~g-mt~~~~d~Ll--~h~Fg~~~~---~~n~Dlv~~yr~~--l~~~~Np~Nl~~f~~sy----------------~~ 207 (283)
T PF03096_consen 155 ---YG-MTSSVKDYLL--WHYFGKEEE---ENNSDLVQTYRQH--LDERINPKNLALFLNSY----------------NS 207 (283)
T ss_dssp ----C-TTS-HHHHHH--HHHS-HHHH---HCT-HHHHHHHHH--HHT-TTHHHHHHHHHHH----------------HT
T ss_pred ---cc-cccchHHhhh--hcccccccc---cccHHHHHHHHHH--HhcCCCHHHHHHHHHHH----------------hc
Confidence 00 0011111111 111111000 0000111000000 00011222222232222 11
Q ss_pred ccC--CCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 235 KFS--LPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 235 ~~~--~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
+.+ ...+...||+|++.|+.++... .+.+. ..+|. -.+.++..+++||=.+..|+|+.+++.++=||+.
T Consensus 208 R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~--ns~Ld--p~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 208 RTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEM--NSKLD--PTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp -----SECTTCCS-EEEEEETTSTTHH--HHHHH--HHHS---CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred cccchhhcCCCCCCeEEEEecCCcchh--hHHHH--HhhcC--cccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 111 1223556999999999998652 22111 11222 2369999999999999999999999999999974
No 75
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.65 E-value=5.1e-15 Score=120.83 Aligned_cols=111 Identities=25% Similarity=0.440 Sum_probs=97.3
Q ss_pred EEEEEecC-CCCc--eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh
Q 021530 15 NLHVAETG-TGPN--VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL 91 (311)
Q Consensus 15 ~i~y~~~G-~g~~--~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l 91 (311)
+-.|.+.. +|.+ +||-+||-|+|+++|+++.+.|.+.+.|+|.+.+||+|.|..++. -.|+-.+-..-+.+||+.|
T Consensus 22 ~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l 100 (297)
T PF06342_consen 22 QAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDEL 100 (297)
T ss_pred EEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHc
Confidence 44577664 4543 699999999999999999999999999999999999999987654 4689999999999999999
Q ss_pred CCC-cEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 92 GIN-KVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 92 ~~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+++ +..++|||.||-.|+.+|..+| +.++++++++
T Consensus 101 ~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 101 GIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred CCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 996 5899999999999999999996 6799999865
No 76
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.63 E-value=2.4e-15 Score=140.90 Aligned_cols=110 Identities=23% Similarity=0.157 Sum_probs=89.6
Q ss_pred eeEEEECCEEEEEEecCCCC----------ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCC-----
Q 021530 6 HKYIKVQGLNLHVAETGTGP----------NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPA----- 70 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~G~g~----------~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~----- 70 (311)
..+...++.+|.|...|.|. |+|||+||++++...|..++..|.+.+|+||++|+||||.|....
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 34455588888888766442 279999999999999999999888778999999999999995531
Q ss_pred -----CCCcC-----------cHHHHHHHHHHHHHHhC----------------CCcEEEEEeCcChHHHHHHHHhC
Q 021530 71 -----EPEKA-----------SFKDITNDLLATLDHLG----------------INKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 71 -----~~~~~-----------~~~~~a~dl~~~l~~l~----------------~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+...| ++.+++.|+..+...++ ..+++++||||||.++..++...
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 11112 88999999999999987 34899999999999999999864
No 77
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=6.9e-14 Score=112.07 Aligned_cols=221 Identities=17% Similarity=0.134 Sum_probs=133.7
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-hCCCcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-LGINKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-l~~~~~~lvGhS~Gg 105 (311)
.|+|+|=-|+++..|+.....+.. ...++++.+||.|.--..+ -..+++++|+.+..-+.. +.-+++.++||||||
T Consensus 9 ~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa 85 (244)
T COG3208 9 RLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHSMGA 85 (244)
T ss_pred eEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccchhH
Confidence 688888777777777765556654 5999999999999764322 346999999999988873 444679999999999
Q ss_pred HHHHHHHHhCCC---ceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCC
Q 021530 106 RPAYLFALLHPE---RVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIP 182 (311)
Q Consensus 106 ~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (311)
++|..+|.+.-. ....+.++++... ..... +.+...+-.++++.+ ..+.+...
T Consensus 86 ~lAfEvArrl~~~g~~p~~lfisg~~aP--~~~~~--------------------~~i~~~~D~~~l~~l-~~lgG~p~- 141 (244)
T COG3208 86 MLAFEVARRLERAGLPPRALFISGCRAP--HYDRG--------------------KQIHHLDDADFLADL-VDLGGTPP- 141 (244)
T ss_pred HHHHHHHHHHHHcCCCcceEEEecCCCC--CCccc--------------------CCccCCCHHHHHHHH-HHhCCCCh-
Confidence 999999986532 2556666554210 00000 001111223334332 22222211
Q ss_pred CCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCC
Q 021530 183 IAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPG 262 (311)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~ 262 (311)
..-.+++++. .....-..++.. +.. |+.. ....++||+.++.|++|..++.+.
T Consensus 142 e~led~El~~-------------------l~LPilRAD~~~-~e~-Y~~~------~~~pl~~pi~~~~G~~D~~vs~~~ 194 (244)
T COG3208 142 ELLEDPELMA-------------------LFLPILRADFRA-LES-YRYP------PPAPLACPIHAFGGEKDHEVSRDE 194 (244)
T ss_pred HHhcCHHHHH-------------------HHHHHHHHHHHH-hcc-cccC------CCCCcCcceEEeccCcchhccHHH
Confidence 0001112222 111111111110 000 1111 113689999999999999886543
Q ss_pred chhhhhcccccccC-CCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 263 IEDYIRSGKVKDFV-PNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 263 ~~~~~~~~~l~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
+.. .+++. ...+++.++ +|||...++.+++.+.|...+.
T Consensus 195 ~~~------W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 195 LGA------WREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHH------HHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 322 22333 368999997 5999999999999999998885
No 78
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.6e-13 Score=129.06 Aligned_cols=228 Identities=21% Similarity=0.319 Sum_probs=133.2
Q ss_pred EEEE-CCEEEEEEecC---CCC----ceEEEECCCCCchhh--hHHHHHHHHHCCcEEEEeCCCCCCC---C--CCCC-C
Q 021530 8 YIKV-QGLNLHVAETG---TGP----NVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGL---S--DPPA-E 71 (311)
Q Consensus 8 ~~~~-~g~~i~y~~~G---~g~----~~vvllHG~~~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~---S--~~~~-~ 71 (311)
.+.. ||.+|+....- .++ |.||++||.|..... |...++.+...||.|+.++.||-+. . +... .
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~ 448 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGD 448 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhc
Confidence 3444 78888866543 221 489999999866554 4455667778899999999996443 2 1000 1
Q ss_pred CCcCcHHHHHHHHHHHHHHhCC---CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHh
Q 021530 72 PEKASFKDITNDLLATLDHLGI---NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYIS 148 (311)
Q Consensus 72 ~~~~~~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (311)
.....++++.+.+. ++++.++ +|+.+.|||.||.+++..+.+.| ++++-+...+.. .... .
T Consensus 449 ~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~-----~~~~---------~ 512 (620)
T COG1506 449 WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV-----DWLL---------Y 512 (620)
T ss_pred cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc-----hhhh---------h
Confidence 12234455444444 5555553 48999999999999999999888 555555443211 0000 0
Q ss_pred hhcCccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCcccccc
Q 021530 149 RWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVP 228 (311)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (311)
... ... .+ ... .+. ... .+.+ ..+ .+.. .+ .+
T Consensus 513 -~~~-~~~--~~-~~~----~~~---------------------~~~----~~~~-~~~---~~~~-~s------p~--- 544 (620)
T COG1506 513 -FGE-STE--GL-RFD----PEE---------------------NGG----GPPE-DRE---KYED-RS------PI--- 544 (620)
T ss_pred -ccc-cch--hh-cCC----HHH---------------------hCC----Cccc-ChH---HHHh-cC------hh---
Confidence 000 000 00 000 000 000 0000 000 0000 00 00
Q ss_pred ccccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccc-cChhHHHHHHHHHH
Q 021530 229 YRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQE-QSPEEVNQLVLTFL 307 (311)
Q Consensus 229 ~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl 307 (311)
....++++|+|+|||++|..++.+....+. ..|++.-..++++++|+.||.+.- ++-..+.+.+.+|+
T Consensus 545 ---------~~~~~i~~P~LliHG~~D~~v~~~q~~~~~--~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~ 613 (620)
T COG1506 545 ---------FYADNIKTPLLLIHGEEDDRVPIEQAEQLV--DALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWF 613 (620)
T ss_pred ---------hhhcccCCCEEEEeecCCccCChHHHHHHH--HHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHH
Confidence 011268999999999999999876554443 346665567999999999998866 45566778888888
Q ss_pred hhC
Q 021530 308 NKH 310 (311)
Q Consensus 308 ~~~ 310 (311)
.++
T Consensus 614 ~~~ 616 (620)
T COG1506 614 KRH 616 (620)
T ss_pred HHH
Confidence 764
No 79
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=3.8e-13 Score=108.59 Aligned_cols=96 Identities=17% Similarity=0.270 Sum_probs=67.2
Q ss_pred eEEEECCCCCchhhhHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-hC-CCcEEEEEeCc
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-LG-INKVFLVAKDF 103 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-l~-~~~~~lvGhS~ 103 (311)
+|++.||...+...-..+...|.. .+++|+.+|.+|+|.|...+ .+...-+-++.+-+.++. .| .+++.|.|+|+
T Consensus 62 ~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p--sE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 62 TLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP--SERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred EEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc--ccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 899999996555533333334433 37999999999999997543 222222222233333333 33 68899999999
Q ss_pred ChHHHHHHHHhCCCceeeEEEec
Q 021530 104 GARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 104 Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
|...++.+|+++| ++++|+.+
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred CchhhhhHhhcCC--cceEEEec
Confidence 9999999999999 89999876
No 80
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.53 E-value=4e-14 Score=116.01 Aligned_cols=196 Identities=17% Similarity=0.239 Sum_probs=111.3
Q ss_pred HHHHHHHHCCcEEEEeCCCCCCCCCCCC---CCCcCcHHHHHHHHHHHHHHh------CCCcEEEEEeCcChHHHHHHHH
Q 021530 43 HQMVAVAAAGFRAIAPDYRGYGLSDPPA---EPEKASFKDITNDLLATLDHL------GINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 43 ~~~~~l~~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
.....|.+.||.|+.+|.||.+...... ...... ....+|+.+.++.+ ..+++.++|||+||.+++.++.
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWG-QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTT-HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhcccc-ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 3455676789999999999988532210 001111 13345555555444 2368999999999999999999
Q ss_pred hCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhh
Q 021530 114 LHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDL 193 (311)
Q Consensus 114 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (311)
.+|+++++.+..++......... . . .. ... .+ +.. ...
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~-----------~--~----------~~-~~~-~~--~~~-~~~-------------- 121 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYG-----------T--T----------DI-YTK-AE--YLE-YGD-------------- 121 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBH-----------H--T----------CC-HHH-GH--HHH-HSS--------------
T ss_pred ccceeeeeeeccceecchhcccc-----------c--c----------cc-ccc-cc--ccc-cCc--------------
Confidence 99999999987764322110000 0 0 00 000 00 000 000
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhccccc
Q 021530 194 VDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVK 273 (311)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~ 273 (311)
+ +..++...... .. .... ...+++|+|+++|++|..+|+.....+. +.|.
T Consensus 122 -------~-~~~~~~~~~~s-~~-------------~~~~------~~~~~~P~li~hG~~D~~Vp~~~s~~~~--~~L~ 171 (213)
T PF00326_consen 122 -------P-WDNPEFYRELS-PI-------------SPAD------NVQIKPPVLIIHGENDPRVPPSQSLRLY--NALR 171 (213)
T ss_dssp -------T-TTSHHHHHHHH-HG-------------GGGG------GCGGGSEEEEEEETTBSSSTTHHHHHHH--HHHH
T ss_pred -------c-chhhhhhhhhc-cc-------------cccc------cccCCCCEEEEccCCCCccCHHHHHHHH--HHHH
Confidence 0 00111111110 00 0000 0017899999999999999876554443 2355
Q ss_pred ccCCCeEEEEeCCCCCCcc-ccChhHHHHHHHHHHhhCC
Q 021530 274 DFVPNLEIIRLSEGSHFVQ-EQSPEEVNQLVLTFLNKHV 311 (311)
Q Consensus 274 ~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~~~~ 311 (311)
+.-..+++++++++||... .+......+.+.+|+++++
T Consensus 172 ~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 172 KAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 5444599999999999544 4555688899999998753
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.52 E-value=2.3e-13 Score=111.71 Aligned_cols=180 Identities=25% Similarity=0.319 Sum_probs=105.1
Q ss_pred ceEEEECCCCCchhhhHHHHH-HHHHCCcEEEEeCCCC------CCCC--CCC------CCC--CcCcHHHHHHHHHHHH
Q 021530 26 NVVVFLHGFPEIWYSWRHQMV-AVAAAGFRAIAPDYRG------YGLS--DPP------AEP--EKASFKDITNDLLATL 88 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~-~l~~~~~~vi~~Dl~G------~G~S--~~~------~~~--~~~~~~~~a~dl~~~l 88 (311)
+.|||+||++++...|..... .+...+.++|++.-|- .|.. .+- .+. ..-.+.+.++.+.+++
T Consensus 15 ~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~li 94 (216)
T PF02230_consen 15 PLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDELI 94 (216)
T ss_dssp EEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHHHH
Confidence 489999999999987765443 1112367888776542 2331 111 100 1124444555566666
Q ss_pred HHh-----CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcC
Q 021530 89 DHL-----GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRH 163 (311)
Q Consensus 89 ~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (311)
+.. ..++++|.|.|.||.+|+.+++++|+++.+++.+++.. + .
T Consensus 95 ~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~-~-----------~-------------------- 142 (216)
T PF02230_consen 95 DEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL-P-----------P-------------------- 142 (216)
T ss_dssp HHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES----T-----------T--------------------
T ss_pred HHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc-c-----------c--------------------
Confidence 643 33689999999999999999999999999999887321 0 0
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCcc
Q 021530 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 243 (311)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (311)
... ... . . . ..-
T Consensus 143 -------------~~~--------------~~~-----------------------------~--~----~------~~~ 154 (216)
T PF02230_consen 143 -------------ESE--------------LED-----------------------------R--P----E------ALA 154 (216)
T ss_dssp -------------GCC--------------CHC-----------------------------C--H----C------CCC
T ss_pred -------------ccc--------------ccc-----------------------------c--c----c------ccC
Confidence 000 000 0 0 0 011
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhhCC
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKHV 311 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~~~ 311 (311)
++|+++++|++|+++|.+..... .+.+++...+.+++.++++||... .+..+.+.+||.++|
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~--~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKT--AEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKHI 216 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHH--HHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH-
T ss_pred CCcEEEEecCCCCcccHHHHHHH--HHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhhC
Confidence 68999999999999986543332 234566656899999999999774 455556889988754
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.50 E-value=1.1e-12 Score=118.36 Aligned_cols=98 Identities=10% Similarity=0.110 Sum_probs=84.2
Q ss_pred eEEEECCCCCchhhhH-----HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh----CCCcEE
Q 021530 27 VVVFLHGFPEIWYSWR-----HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVF 97 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~-----~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~ 97 (311)
|||+|+.+-.-.+.|+ .++..|++.||+|+.+|.++-+.++ ...++++|++.+.+.++.. |-++++
T Consensus 217 PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 217 PLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred cEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCCee
Confidence 8999999987777775 5778899999999999999977664 3579999998888877776 678999
Q ss_pred EEEeCcChHHHHH----HHHhCCC-ceeeEEEeccCC
Q 021530 98 LVAKDFGARPAYL----FALLHPE-RVSGVITLGVPF 129 (311)
Q Consensus 98 lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~ 129 (311)
++|||+||.++.. ||+++++ +|++++++.++.
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 9999999999997 8999996 899999988764
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.50 E-value=2.9e-12 Score=107.05 Aligned_cols=244 Identities=18% Similarity=0.228 Sum_probs=124.2
Q ss_pred eEEEECCCCCchhh-hH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh----CCCcEEEEE
Q 021530 27 VVVFLHGFPEIWYS-WR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLVA 100 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~lvG 100 (311)
.||++||+-+++++ +. .+...+.+.||.||+++.|||+.+....+ .-|+.-. .+|+..+++.+ .-.++..+|
T Consensus 77 ~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh~G~-t~D~~~~l~~l~~~~~~r~~~avG 154 (345)
T COG0429 77 LVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYHSGE-TEDIRFFLDWLKARFPPRPLYAVG 154 (345)
T ss_pred eEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceecccc-hhHHHHHHHHHHHhCCCCceEEEE
Confidence 89999998655543 43 45567777899999999999999865332 2232222 25666666555 457899999
Q ss_pred eCcChHHHHHHHHhCCC--ceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHH---HHHHHHHhh
Q 021530 101 KDFGARPAYLFALLHPE--RVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAK---TVVRNIYIL 175 (311)
Q Consensus 101 hS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 175 (311)
.|+||.+-..|-....+ .+.+.+.++.|+.. ......+...+.. ..+++.-.+ ..+++-...
T Consensus 155 ~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl---~~~~~~l~~~~s~----------~ly~r~l~~~L~~~~~~kl~~ 221 (345)
T COG0429 155 FSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL---EACAYRLDSGFSL----------RLYSRYLLRNLKRNAARKLKE 221 (345)
T ss_pred ecccHHHHHHHHHhhccCcccceeeeeeCHHHH---HHHHHHhcCchhh----------hhhHHHHHHHHHHHHHHHHHh
Confidence 99999554444443332 34455555543211 0000000010000 001111011 111110111
Q ss_pred hcCCCCCCCCch-hhhhhhccCCCCCCCCCCHHHHHHHHHHH--ccCCCCccccccccccccccCCCCCccccceEEEee
Q 021530 176 FSRSEIPIAPEN-KEIMDLVDASTPLPPWLTAEDLATYGALY--EKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILG 252 (311)
Q Consensus 176 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G 252 (311)
+... .... .+..+... . +.++-..+ ...|+.....+ |+... ..-..++|.+|+|+|+.
T Consensus 222 l~~~----~p~~~~~~ik~~~----t--------i~eFD~~~Tap~~Gf~da~dY-Yr~aS--s~~~L~~Ir~PtLii~A 282 (345)
T COG0429 222 LEPS----LPGTVLAAIKRCR----T--------IREFDDLLTAPLHGFADAEDY-YRQAS--SLPLLPKIRKPTLIINA 282 (345)
T ss_pred cCcc----cCcHHHHHHHhhc----h--------HHhccceeeecccCCCcHHHH-HHhcc--ccccccccccceEEEec
Confidence 1000 0000 00000000 0 00000000 01122222222 22111 11123489999999999
Q ss_pred CCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCcccc----Chh-HHHHHHHHHHhh
Q 021530 253 EKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ----SPE-EVNQLVLTFLNK 309 (311)
Q Consensus 253 ~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~Fl~~ 309 (311)
.+|+++++..... ......|+..+.+-+-+||.-++. +|+ +.-+.|.+|++.
T Consensus 283 ~DDP~~~~~~iP~-----~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 283 KDDPFMPPEVIPK-----LQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCCCChhhCCc-----chhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 9999997643321 111257899999999999988877 554 667788888764
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=2.4e-11 Score=105.19 Aligned_cols=267 Identities=18% Similarity=0.235 Sum_probs=140.2
Q ss_pred ceeEEEE-CCEEEEE--EecC--------CCCceEEEECCCCCchhh--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC
Q 021530 5 EHKYIKV-QGLNLHV--AETG--------TGPNVVVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE 71 (311)
Q Consensus 5 ~~~~~~~-~g~~i~y--~~~G--------~g~~~vvllHG~~~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~ 71 (311)
+..++++ ||..+.. ...+ ...|.||++||+.+++.. -+..+..+.++||+|+++..||+|.|.-..
T Consensus 94 ~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT- 172 (409)
T KOG1838|consen 94 TREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT- 172 (409)
T ss_pred eeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC-
Confidence 3456666 7776664 2222 122489999999765553 334555566779999999999999997543
Q ss_pred CCcCcHHHHHHHHHHHHHHhC----CCcEEEEEeCcChHHHHHHHHhCCCc--eeeEEEeccCCCCCCchh-hhhcCCch
Q 021530 72 PEKASFKDITNDLLATLDHLG----INKVFLVAKDFGARPAYLFALLHPER--VSGVITLGVPFIPPGTAE-FHKSLPEG 144 (311)
Q Consensus 72 ~~~~~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~-~~~~~~~~ 144 (311)
+..|+.. ..+|+.++++.+. ..+...+|.||||.+-..|...-.++ +.+-+.++.|+..-.-.. ........
T Consensus 173 pr~f~ag-~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~ 251 (409)
T KOG1838|consen 173 PRLFTAG-WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRR 251 (409)
T ss_pred CceeecC-CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchH
Confidence 2344432 3556666666553 45799999999999999998876543 334444554543210000 00000000
Q ss_pred hhHhhhcCccccccccCcCcHHHHHHHHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHc--cCCCC
Q 021530 145 FYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYE--KSGFR 222 (311)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (311)
++.... .......+..... ....+..++....+. ..++++-..+. ..|+.
T Consensus 252 ~y~~~l-----------~~~l~~~~~~~r~-------~~~~~~vd~d~~~~~----------~SvreFD~~~t~~~~gf~ 303 (409)
T KOG1838|consen 252 FYNRAL-----------TLNLKRIVLRHRH-------TLFEDPVDFDVILKS----------RSVREFDEALTRPMFGFK 303 (409)
T ss_pred HHHHHH-----------HHhHHHHHhhhhh-------hhhhccchhhhhhhc----------CcHHHHHhhhhhhhcCCC
Confidence 110000 0001111111000 000011111111110 11222222211 12222
Q ss_pred ccccccccccccccCCCCCccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccC----hh-
Q 021530 223 TALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQS----PE- 297 (311)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~----p~- 297 (311)
....+ |+.... .....+|++|+|+|+..+|+++|.+..- . ......|+.=+++-.-+||.-++|. +.
T Consensus 304 ~~deY-Y~~aSs--~~~v~~I~VP~L~ina~DDPv~p~~~ip-~----~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~ 375 (409)
T KOG1838|consen 304 SVDEY-YKKASS--SNYVDKIKVPLLCINAADDPVVPEEAIP-I----DDIKSNPNVLLVITSHGGHLGFLEGLWPSART 375 (409)
T ss_pred cHHHH-Hhhcch--hhhcccccccEEEEecCCCCCCCcccCC-H----HHHhcCCcEEEEEeCCCceeeeeccCCCccch
Confidence 21122 322111 1123489999999999999999865432 2 1233468888888888999999987 22
Q ss_pred HHHHHHHHHHhh
Q 021530 298 EVNQLVLTFLNK 309 (311)
Q Consensus 298 ~~~~~i~~Fl~~ 309 (311)
.+.+.+.+|+.+
T Consensus 376 w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 376 WMDKLLVEFLGN 387 (409)
T ss_pred hHHHHHHHHHHH
Confidence 334447777754
No 85
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.46 E-value=6.3e-13 Score=89.88 Aligned_cols=76 Identities=32% Similarity=0.412 Sum_probs=64.0
Q ss_pred CEEEEEEecC-CCC--ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Q 021530 13 GLNLHVAETG-TGP--NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD 89 (311)
Q Consensus 13 g~~i~y~~~G-~g~--~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~ 89 (311)
|.+|+|..+- ..+ .+|+++||++.++..|..++..|.+.||.|+++|+||||+|+... ...-+++++++|+.+++|
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r-g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR-GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc-cccCCHHHHHHHHHHHhC
Confidence 5788888875 222 279999999999999999999999999999999999999998543 234599999999999875
No 86
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.44 E-value=1.3e-12 Score=106.84 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=68.7
Q ss_pred ceEEEECCCCCchhhhHH---HHHHHHHCCcEEEEeCCCCCCCCCCCCC--------CCcCcHHHHHHHHHHHHHHhCC-
Q 021530 26 NVVVFLHGFPEIWYSWRH---QMVAVAAAGFRAIAPDYRGYGLSDPPAE--------PEKASFKDITNDLLATLDHLGI- 93 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~---~~~~l~~~~~~vi~~Dl~G~G~S~~~~~--------~~~~~~~~~a~dl~~~l~~l~~- 93 (311)
|.||++||++++...|.. ....+.+.+|.|++||.+|+|.+....+ .......++.+.+..+.+..++
T Consensus 14 P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id 93 (212)
T TIGR01840 14 ALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSID 93 (212)
T ss_pred CEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcC
Confidence 489999999988776641 2233334589999999999986542100 0001112222222222333344
Q ss_pred -CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 94 -NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 94 -~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
++++|+|||+||.+++.+++++|+++.+++.+++
T Consensus 94 ~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 94 PNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred hhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 5899999999999999999999999999987764
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.42 E-value=2.9e-11 Score=105.00 Aligned_cols=100 Identities=20% Similarity=0.181 Sum_probs=70.6
Q ss_pred ceEEEECCCC---CchhhhHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC--CcEEEE
Q 021530 26 NVVVFLHGFP---EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI--NKVFLV 99 (311)
Q Consensus 26 ~~vvllHG~~---~~~~~w~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~lv 99 (311)
|+||++||.+ ++...|+.+...+.. .++.|+.+|.|.......+. ......+..+.+.+..+++++ +++.|+
T Consensus 82 p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 82 ATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 3899999976 566678777777765 38999999999765443221 111223334445555566776 589999
Q ss_pred EeCcChHHHHHHHHhC------CCceeeEEEecc
Q 021530 100 AKDFGARPAYLFALLH------PERVSGVITLGV 127 (311)
Q Consensus 100 GhS~Gg~ia~~~a~~~------p~~v~~lvl~~~ 127 (311)
|+|+||.+|+.++... +.++.+++++.+
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 9999999999988753 356888887754
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.42 E-value=9.2e-13 Score=122.73 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=85.2
Q ss_pred CCEEEEEEec---CCCC-ceEEEECCCCCchh---hhH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 12 QGLNLHVAET---GTGP-NVVVFLHGFPEIWY---SWR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 12 ~g~~i~y~~~---G~g~-~~vvllHG~~~~~~---~w~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
||.+|++... +.++ |+||++||++.+.. .|. .....+.+.||.|+++|+||+|.|+... ..++ ...++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~--~~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF--DLLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce--EecC-cccchH
Confidence 7888885543 2222 38999999987653 222 1334566779999999999999998543 2233 567788
Q ss_pred HHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 84 LLATLDHLGI-----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 84 l~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+.++++.+.. .++.++|||+||.+++.+|+.+|+++++++..++
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 8888877632 4899999999999999999999999999997664
No 89
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.41 E-value=3.4e-12 Score=99.74 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=78.6
Q ss_pred CCEEEEE-EecC-CCCceEEEECCCCCchhhhHHHHH-HHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHH-H
Q 021530 12 QGLNLHV-AETG-TGPNVVVFLHGFPEIWYSWRHQMV-AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLA-T 87 (311)
Q Consensus 12 ~g~~i~y-~~~G-~g~~~vvllHG~~~~~~~w~~~~~-~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~-~ 87 (311)
|.++++. .... +..|+|+.+||..++....-..+. .....+.+|..++.||||.|...+... ++.--++.+++ +
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~--GL~lDs~avldyl 140 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE--GLKLDSEAVLDYL 140 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc--ceeccHHHHHHHH
Confidence 7777763 3332 333499999999888776544332 334558999999999999997644222 22222222222 2
Q ss_pred HHH--hCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 88 LDH--LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 88 l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
++. +.-.|.+|.|-|+||.+|..+|++..+++.++++-++
T Consensus 141 ~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 141 MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred hcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 222 2335799999999999999999999999999998764
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.37 E-value=1.5e-12 Score=107.07 Aligned_cols=179 Identities=23% Similarity=0.290 Sum_probs=105.5
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCC-CCCcCc--------HHHHHHHHHHHHHHh---C--
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPA-EPEKAS--------FKDITNDLLATLDHL---G-- 92 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~-~~~~~~--------~~~~a~dl~~~l~~l---~-- 92 (311)
.||++|++.+-...-+.....|.+.||.|++||+-+-....... ...... .+...+|+.+.++.| .
T Consensus 16 ~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~ 95 (218)
T PF01738_consen 16 AVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEV 95 (218)
T ss_dssp EEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTC
T ss_pred EEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcccc
Confidence 89999998776555556677888889999999986544411111 000001 234566775555555 3
Q ss_pred -CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhhhcCCchhhHhhhcCccccccccCcCcHHHHHHH
Q 021530 93 -INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRN 171 (311)
Q Consensus 93 -~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (311)
.+|+.++|+||||.+++.+|... +++++.+..-+.. .+ . .....
T Consensus 96 ~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~---~~--------~-----------------------~~~~~ 140 (218)
T PF01738_consen 96 DPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS---PP--------P-----------------------PPLED 140 (218)
T ss_dssp EEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS---SG--------G-----------------------GHHHH
T ss_pred CCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC---CC--------C-----------------------cchhh
Confidence 35899999999999999999887 6777777543100 00 0 00000
Q ss_pred HHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEEe
Q 021530 172 IYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLIL 251 (311)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~ 251 (311)
...+++|+|++.
T Consensus 141 --------------------------------------------------------------------~~~~~~P~l~~~ 152 (218)
T PF01738_consen 141 --------------------------------------------------------------------APKIKAPVLILF 152 (218)
T ss_dssp --------------------------------------------------------------------GGG--S-EEEEE
T ss_pred --------------------------------------------------------------------hcccCCCEeecC
Confidence 014789999999
Q ss_pred eCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChh--------HHHHHHHHHHhhC
Q 021530 252 GEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPE--------EVNQLVLTFLNKH 310 (311)
Q Consensus 252 G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~Fl~~~ 310 (311)
|++|+.++.+.+..+. +.+.+.-...++++++|++|........ +--+.+.+||+++
T Consensus 153 g~~D~~~~~~~~~~~~--~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 153 GENDPFFPPEEVEALE--EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp ETT-TTS-HHHHHHHH--HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCCCChHHHHHHH--HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 9999999765444332 2344445679999999999977655432 3346677787765
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.36 E-value=3.9e-11 Score=105.42 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=83.6
Q ss_pred ceEEEECCCCCchhhhH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 021530 26 NVVVFLHGFPEIWYSWR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (311)
+|||++--+.++.+... ..++.|++ ++.|+..|..--+..... ...+++++|++-+.++++.+|-+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~--~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS--AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh--cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 38999999987777654 46678887 999999999888755321 24689999999999999999987 999999999
Q ss_pred hHHHHHHHHhC-----CCceeeEEEeccCCCC
Q 021530 105 ARPAYLFALLH-----PERVSGVITLGVPFIP 131 (311)
Q Consensus 105 g~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 131 (311)
|..++.+++.+ |+++++++++++|...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99988776665 7789999999887543
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.26 E-value=6.6e-11 Score=98.00 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=81.7
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCC-cEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC-cEEEEEeCcC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAG-FRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-KVFLVAKDFG 104 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~G 104 (311)
+|+|+|+.+++...|..++..+. .. +.|+.++.||.+.... ...+++++|++..+.|....-+ ++.|+|||+|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~-~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALP-DDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHT-TTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCC-CCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 79999999999999998887664 45 9999999999984332 3469999999999988887766 9999999999
Q ss_pred hHHHHHHHHh---CCCceeeEEEeccC
Q 021530 105 ARPAYLFALL---HPERVSGVITLGVP 128 (311)
Q Consensus 105 g~ia~~~a~~---~p~~v~~lvl~~~~ 128 (311)
|.+|+.+|.. ....|..+++++++
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCC
Confidence 9999999985 34569999999864
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.26 E-value=5.1e-11 Score=93.38 Aligned_cols=88 Identities=19% Similarity=0.349 Sum_probs=61.4
Q ss_pred EEEECCCCCch-hhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 28 VVFLHGFPEIW-YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 28 vvllHG~~~~~-~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
|++|||+.++. ..|..-+..-.+..++|-.+|+ + ..+.+++.+.+.+-+..+. +++.|||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 68899997764 4588766665554577777766 1 2366777777777766553 4699999999999
Q ss_pred HHHHHH-HhCCCceeeEEEeccC
Q 021530 107 PAYLFA-LLHPERVSGVITLGVP 128 (311)
Q Consensus 107 ia~~~a-~~~p~~v~~lvl~~~~ 128 (311)
.+++++ ...+.+|.+++|++++
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--
T ss_pred HHHHHHhhcccccccEEEEEcCC
Confidence 999999 6788999999999753
No 94
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=6.6e-10 Score=91.90 Aligned_cols=99 Identities=26% Similarity=0.318 Sum_probs=74.8
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCC-CCCCCCC-CCC--------cCcHHHHHHHHHHHHHHhC---
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPPA-EPE--------KASFKDITNDLLATLDHLG--- 92 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~~-~~~--------~~~~~~~a~dl~~~l~~l~--- 92 (311)
|.||++|++.+-....+.....|...||-|++||+-+. |.+.... ... ..+..+...|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 58999999887777788888999989999999999883 3332221 000 1223577788888877773
Q ss_pred ---CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 93 ---INKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 93 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
.+++.++|+||||.+++.++...| +|++.+..
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 467999999999999999999988 56666643
No 95
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.26 E-value=4.5e-11 Score=106.81 Aligned_cols=122 Identities=16% Similarity=0.264 Sum_probs=86.6
Q ss_pred eeEEEE-CCEEEEEEe--cCCCCceEEEE-CCC---CCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHH
Q 021530 6 HKYIKV-QGLNLHVAE--TGTGPNVVVFL-HGF---PEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFK 78 (311)
Q Consensus 6 ~~~~~~-~g~~i~y~~--~G~g~~~vvll-HG~---~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 78 (311)
..+... +|+++.+-. .|.. .+-.+ ... ..+...|..+++.|.+.||. +..|++|+|++-+..+.....++
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~~--~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~-~~~dL~g~gYDwR~~~~~~~~~~ 146 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGLY--AIDILDPDVIIRLDEVYYFHDMIEQLIKWGYK-EGKTLFGFGYDFRQSNRLPETMD 146 (440)
T ss_pred CceecCCCCceEEcCCCCCCce--eeEEecCccccCcchHHHHHHHHHHHHHcCCc-cCCCcccCCCCccccccHHHHHH
Confidence 345566 588887764 3421 12111 111 35667899999999887764 48999999999664321123456
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCc----eeeEEEeccCCC
Q 021530 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPER----VSGVITLGVPFI 130 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~ 130 (311)
++.+.+.++.++.+.++++|+||||||.++..++..+|+. |+++|.+++|+.
T Consensus 147 ~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 147 GLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 6666666677777889999999999999999999999864 788889987754
No 96
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.25 E-value=1.2e-10 Score=95.62 Aligned_cols=101 Identities=21% Similarity=0.253 Sum_probs=70.6
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHH--------CCcEEEEeCCCCCCCCCCCCCCCcCcHHHH----HHHHHHHHHH
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAA--------AGFRAIAPDYRGYGLSDPPAEPEKASFKDI----TNDLLATLDH 90 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~--------~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~----a~dl~~~l~~ 90 (311)
+|. |||||||..++...|+.......+ ..+++++.|+...... . ....+.+. .+.+..+++.
T Consensus 3 ~g~-pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~----~g~~l~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 3 SGI-PVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-F----HGRTLQRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCC-EEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc-c----ccccHHHHHHHHHHHHHHHHHh
Confidence 455 899999999998887765544421 1478999998776422 1 11233333 3344455555
Q ss_pred h-----CCCcEEEEEeCcChHHHHHHHHhCC---CceeeEEEeccCC
Q 021530 91 L-----GINKVFLVAKDFGARPAYLFALLHP---ERVSGVITLGVPF 129 (311)
Q Consensus 91 l-----~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~ 129 (311)
. +.++++||||||||.+|..+....+ +.|+.+|.+++|.
T Consensus 77 ~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 77 YKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 5 5678999999999999988877543 5799999999774
No 97
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.21 E-value=7.7e-11 Score=120.96 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=87.0
Q ss_pred cCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC-cEEEE
Q 021530 21 TGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-KVFLV 99 (311)
Q Consensus 21 ~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lv 99 (311)
.|+++ +++|+||+++++..|..+...|. .+++|+++|+||+|.+.. ..++++++++++.+.++++... +++++
T Consensus 1065 ~~~~~-~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1065 EGDGP-TLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred cCCCC-CeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 35566 89999999999999998887774 479999999999996632 3579999999999999987654 79999
Q ss_pred EeCcChHHHHHHHHh---CCCceeeEEEecc
Q 021530 100 AKDFGARPAYLFALL---HPERVSGVITLGV 127 (311)
Q Consensus 100 GhS~Gg~ia~~~a~~---~p~~v~~lvl~~~ 127 (311)
||||||.+|..+|.+ .|+++..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 999999999999995 5889999998874
No 98
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.20 E-value=8.9e-10 Score=95.08 Aligned_cols=114 Identities=25% Similarity=0.237 Sum_probs=70.6
Q ss_pred ECCEEEEEE-ec---CCCC-ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCC-CCCC---------------
Q 021530 11 VQGLNLHVA-ET---GTGP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGL-SDPP--------------- 69 (311)
Q Consensus 11 ~~g~~i~y~-~~---G~g~-~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~-S~~~--------------- 69 (311)
++|.+|+-. .. +.++ |.||.+||.++....|...+. +...||-|+++|.||.|. |...
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g 142 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRG 142 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTT
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcC
Confidence 366666622 21 2233 378999999999888876554 456799999999999993 2111
Q ss_pred -CC-CCcCcHHHHHHHHHHHHHHhC------CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 70 -AE-PEKASFKDITNDLLATLDHLG------INKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 70 -~~-~~~~~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
.+ ++.|=+..+..|....+|.+. -+++.+.|.|.||.+++.+|+..| ||++.+...
T Consensus 143 ~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 143 IDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp TTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 01 233444556667776666552 258999999999999999999986 688888654
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=99.20 E-value=2.4e-10 Score=91.71 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=66.6
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCC----CCCCCCC--CCCc-------CcHHHHHHHHHHHHHHhCC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY----GLSDPPA--EPEK-------ASFKDITNDLLATLDHLGI 93 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~----G~S~~~~--~~~~-------~~~~~~a~dl~~~l~~l~~ 93 (311)
.||++||+|++.+++-... .+...++++|.+ ||- |.-.... .... .....+++.+....++.++
T Consensus 20 ~iilLHG~Ggde~~~~~~~-~~~~P~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 20 LLILLHGLGGDELDLVPLP-ELILPNATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred EEEEEecCCCChhhhhhhh-hhcCCCCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 6999999999988887633 333335666644 221 1100000 0112 2344456666666777787
Q ss_pred --CcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 94 --NKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 94 --~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
++++++|+|-|+.|++.+..++|+.+++.++.+
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~ 131 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFS 131 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcC
Confidence 789999999999999999999999999998775
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.14 E-value=3.7e-09 Score=78.95 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=77.1
Q ss_pred eEEEECCCCC--chhhhHHHHHHHHHCCcEEEEeCCC-----CCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEE
Q 021530 27 VVVFLHGFPE--IWYSWRHQMVAVAAAGFRAIAPDYR-----GYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (311)
Q Consensus 27 ~vvllHG~~~--~~~~w~~~~~~l~~~~~~vi~~Dl~-----G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (311)
+|||-||-+. ++.....+...+...|+.|..+++| -.|.- +|++...--..++...++++...+.-.+.++=
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-kPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-KPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-CCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 6999998754 5556666777777779999999875 34433 23333444566788889999988877789999
Q ss_pred EeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 100 AKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 100 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
|+||||.++.++|..-.-.|++|++++-|+
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPf 124 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPF 124 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCcc
Confidence 999999999998887555599999987543
No 101
>PRK10115 protease 2; Provisional
Probab=99.07 E-value=1.9e-08 Score=95.86 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=82.5
Q ss_pred CCEEEEEE-ec-----CCC-CceEEEECCCCCchh--hhHHHHHHHHHCCcEEEEeCCCCCCCCCCC------CCCCcCc
Q 021530 12 QGLNLHVA-ET-----GTG-PNVVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP------AEPEKAS 76 (311)
Q Consensus 12 ~g~~i~y~-~~-----G~g-~~~vvllHG~~~~~~--~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~------~~~~~~~ 76 (311)
||.+|.+. .. ..+ .|.||.+||.++.+. .|......+++.||-|+.++.||=|.=... ......+
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~ 504 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNT 504 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCc
Confidence 88888752 22 112 248999999887764 365566678888999999999996654321 0112246
Q ss_pred HHHHHHHHHHHHHHhCC---CcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 77 FKDITNDLLATLDHLGI---NKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
++++++.+..++++ |+ +++.+.|.|.||.++...+..+|+++++.|+..
T Consensus 505 ~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~v 556 (686)
T PRK10115 505 FNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQV 556 (686)
T ss_pred HHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecC
Confidence 66666666656544 43 689999999999999999999999999999764
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.07 E-value=2.7e-08 Score=78.87 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=60.9
Q ss_pred EEEECCCCCchhhhHHHH--HHHHHC--CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 021530 28 VVFLHGFPEIWYSWRHQM--VAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (311)
Q Consensus 28 vvllHG~~~~~~~w~~~~--~~l~~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (311)
|+.||||.+|........ ..+.+. ..+++++|++- ......+.+.+++++..-+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-------------~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-------------FPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-------------CHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 789999998887766422 223222 24566666553 3445667888889988877899999999
Q ss_pred ChHHHHHHHHhCCCceeeEEEecc
Q 021530 104 GARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 104 Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
||..|..+|.+++- .+ |++++
T Consensus 69 GG~~A~~La~~~~~--~a-vLiNP 89 (187)
T PF05728_consen 69 GGFYATYLAERYGL--PA-VLINP 89 (187)
T ss_pred HHHHHHHHHHHhCC--CE-EEEcC
Confidence 99999999999964 33 66764
No 103
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.04 E-value=1.9e-08 Score=77.72 Aligned_cols=88 Identities=22% Similarity=0.282 Sum_probs=60.5
Q ss_pred eEEEECCCC-----CchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHH--HHHHHHHHHhCCCc--EE
Q 021530 27 VVVFLHGFP-----EIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDIT--NDLLATLDHLGINK--VF 97 (311)
Q Consensus 27 ~vvllHG~~-----~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a--~dl~~~l~~l~~~~--~~ 97 (311)
..|.+|-.| .+-..-..+...|.+.||.++.+|+||-|+|+..- ++.+-+.. ...++.+++...+- +.
T Consensus 30 iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f---D~GiGE~~Da~aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 30 IALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF---DNGIGELEDAAAALDWLQARHPDSASCW 106 (210)
T ss_pred eEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc---cCCcchHHHHHHHHHHHHhhCCCchhhh
Confidence 567788543 22222334556777889999999999999998643 33444443 23444555655433 46
Q ss_pred EEEeCcChHHHHHHHHhCCC
Q 021530 98 LVAKDFGARPAYLFALLHPE 117 (311)
Q Consensus 98 lvGhS~Gg~ia~~~a~~~p~ 117 (311)
|.|+|+|++|++.+|.+.|+
T Consensus 107 l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred hcccchHHHHHHHHHHhccc
Confidence 89999999999999999876
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.01 E-value=3.1e-09 Score=91.78 Aligned_cols=104 Identities=12% Similarity=0.137 Sum_probs=81.7
Q ss_pred ceEEEECCCCCchhhhHH-----HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 021530 26 NVVVFLHGFPEIWYSWRH-----QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVA 100 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~-----~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (311)
.||+.+|-+-...+.|+- .+..+.+.|+.|..+|.++-..+....+-++|-.+.+.+.+..+++..|.+++.++|
T Consensus 108 ~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliG 187 (445)
T COG3243 108 RPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIG 187 (445)
T ss_pred CceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceee
Confidence 389999999777776652 456777889999999999887775432223344444556666778888999999999
Q ss_pred eCcChHHHHHHHHhCCCc-eeeEEEeccCC
Q 021530 101 KDFGARPAYLFALLHPER-VSGVITLGVPF 129 (311)
Q Consensus 101 hS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 129 (311)
|+.||.++..+++.++.+ |++++++.++.
T Consensus 188 yCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 188 YCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred EecchHHHHHHHHhhhhcccccceeeecch
Confidence 999999999999999887 99999987753
No 105
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.00 E-value=3.1e-09 Score=87.47 Aligned_cols=100 Identities=32% Similarity=0.417 Sum_probs=72.5
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHH-Hh------CCCcEEE
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD-HL------GINKVFL 98 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~-~l------~~~~~~l 98 (311)
|+|||+||+......+..++.++...||-||++|+...+..... .+...+.+..+++.+=++ .| +++++.|
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~--~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT--DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc--hhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 38999999997666677788999999999999997665442211 112234444444333111 12 4568999
Q ss_pred EEeCcChHHHHHHHHhC-----CCceeeEEEecc
Q 021530 99 VAKDFGARPAYLFALLH-----PERVSGVITLGV 127 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~ 127 (311)
.|||-||-+|..+++.+ +.++++++++++
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEecc
Confidence 99999999999999988 568999999974
No 106
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.00 E-value=8.5e-08 Score=76.92 Aligned_cols=115 Identities=28% Similarity=0.323 Sum_probs=73.4
Q ss_pred eEEEE-CCEEEEEEec-C-C----CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCC-CCCCCCCCCCcCcHH
Q 021530 7 KYIKV-QGLNLHVAET-G-T----GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPPAEPEKASFK 78 (311)
Q Consensus 7 ~~~~~-~g~~i~y~~~-G-~----g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~~~~~~~~~~ 78 (311)
+.+.+ +|.+|+.++. . + ..++||+..||+.....|..++.+|...||+||.||-.-| |.|+... .++|+.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchH
Confidence 45667 8889997654 3 1 2248999999999999999999999988999999998876 8887653 568999
Q ss_pred HHHHHHHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 79 DITNDLLATLDHL---GINKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 79 ~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
...+++..+++-| |+.++-|+..|+.|.||+..|.+- + +.-||..
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i-~-lsfLita 130 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI-N-LSFLITA 130 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEE
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc-C-cceEEEE
Confidence 9999888776655 788999999999999999999953 3 5666654
No 107
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.96 E-value=2.4e-09 Score=86.78 Aligned_cols=88 Identities=24% Similarity=0.234 Sum_probs=54.4
Q ss_pred eEEEECCCCC-chhhhHHHHHHHHHCCcE---EEEeCCCCCCCCCCCCCCC--cCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 021530 27 VVVFLHGFPE-IWYSWRHQMVAVAAAGFR---AIAPDYRGYGLSDPPAEPE--KASFKDITNDLLATLDHLGINKVFLVA 100 (311)
Q Consensus 27 ~vvllHG~~~-~~~~w~~~~~~l~~~~~~---vi~~Dl~G~G~S~~~~~~~--~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (311)
||||+||..+ ....|..+.+.|.+.||. |+++++-....+....... --+..++++.+.+++++-|- ||.|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 8999999988 667899999999999999 7999874444322111000 01223455555566666688 999999
Q ss_pred eCcChHHHHHHHHhC
Q 021530 101 KDFGARPAYLFALLH 115 (311)
Q Consensus 101 hS~Gg~ia~~~a~~~ 115 (311)
|||||.++..+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998887644
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.96 E-value=1.1e-08 Score=86.27 Aligned_cols=100 Identities=22% Similarity=0.224 Sum_probs=84.8
Q ss_pred eEEEECCCCCchhhhHHHHHHHHH---CCcEEEEeCCCCCCCCCCC----CCCCcCcHHHHHHHHHHHHHHhCC------
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAA---AGFRAIAPDYRGYGLSDPP----AEPEKASFKDITNDLLATLDHLGI------ 93 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~---~~~~vi~~Dl~G~G~S~~~----~~~~~~~~~~~a~dl~~~l~~l~~------ 93 (311)
.+||+.|.|+-...+...+..|.+ .++.|++..+.||-.+... .+...|+++++++-..++++++-.
T Consensus 4 li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~ 83 (266)
T PF10230_consen 4 LIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPN 83 (266)
T ss_pred EEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCC
Confidence 689999999999999888777763 3799999999999888765 134679999999988888877643
Q ss_pred CcEEEEEeCcChHHHHHHHHhCC---CceeeEEEec
Q 021530 94 NKVFLVAKDFGARPAYLFALLHP---ERVSGVITLG 126 (311)
Q Consensus 94 ~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~ 126 (311)
.+++|+|||.|++|++.+..++| .+|.+.+++-
T Consensus 84 ~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLf 119 (266)
T PF10230_consen 84 VKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLF 119 (266)
T ss_pred CcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeC
Confidence 46999999999999999999999 7888888774
No 109
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=1.6e-08 Score=83.75 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=82.9
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-CcEEEEEeCcC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDFG 104 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~G 104 (311)
+||+|+|+..+....|..+...+.. ...|+..+-||+|.-.. ..-+++++++...+.|.+..- .+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 3899999999999999987777755 59999999999996432 235999999998888877754 47999999999
Q ss_pred hHHHHHHHHh---CCCceeeEEEeccCCC
Q 021530 105 ARPAYLFALL---HPERVSGVITLGVPFI 130 (311)
Q Consensus 105 g~ia~~~a~~---~p~~v~~lvl~~~~~~ 130 (311)
|.+|+.+|.+ -.+.|..|++++++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999885 2458999999997643
No 110
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.92 E-value=7.3e-09 Score=90.59 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=72.7
Q ss_pred EEECCEEEE-EEecC--CCCceEEEECCCCCchh-hhHHHH-HHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 9 IKVQGLNLH-VAETG--TGPNVVVFLHGFPEIWY-SWRHQM-VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 9 ~~~~g~~i~-y~~~G--~g~~~vvllHG~~~~~~-~w~~~~-~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
+...|.+|. |.... +++.|+|++.|..++.. ++-..+ ..+...|+.++++|.||-|.|...+-..++ +.+-..
T Consensus 170 iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~--~~l~~a 247 (411)
T PF06500_consen 170 IPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS--SRLHQA 247 (411)
T ss_dssp EEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C--CHHHHH
T ss_pred EeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH--HHHHHH
Confidence 444666555 43333 44435666665555443 543344 456778999999999999998642211222 344555
Q ss_pred HHHHHHHhC---CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 84 LLATLDHLG---INKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 84 l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+.+.+.... -+++.++|.|+||.+|.++|..+++|++++|..+++
T Consensus 248 VLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 248 VLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp HHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred HHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 666666553 358999999999999999999999999999998754
No 111
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.92 E-value=1e-08 Score=86.00 Aligned_cols=94 Identities=19% Similarity=0.346 Sum_probs=58.5
Q ss_pred CceEEEECCCCCchhh---hHHHHHHHHHCCcEEEEeCCC----CCCCCCCCCCCCcCcHHHHHHHHHHHHHHh------
Q 021530 25 PNVVVFLHGFPEIWYS---WRHQMVAVAAAGFRAIAPDYR----GYGLSDPPAEPEKASFKDITNDLLATLDHL------ 91 (311)
Q Consensus 25 ~~~vvllHG~~~~~~~---w~~~~~~l~~~~~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------ 91 (311)
++.||||-|+++.... ...+...|.+.+|.|+-+-++ |+|.+ ++++=++||.++++.|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHHHHHHHHHhhcc
Confidence 4489999999765543 444555554458999988654 55543 5666677777666643
Q ss_pred --CCCcEEEEEeCcChHHHHHHHHhCC-----CceeeEEEecc
Q 021530 92 --GINKVFLVAKDFGARPAYLFALLHP-----ERVSGVITLGV 127 (311)
Q Consensus 92 --~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~ 127 (311)
+.+|++|+|||-|+.-+++|..... .+|++.|+-++
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQAp 146 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAP 146 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCC
Confidence 3578999999999999999988752 67999998764
No 112
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.87 E-value=7.9e-09 Score=85.85 Aligned_cols=104 Identities=19% Similarity=0.297 Sum_probs=69.4
Q ss_pred eEEEECCCCCchhhhHHHHHHHH-HCC--cEEE--EeCCCC------CCCC--CCC------CCCCcCcHHHHHHHHHHH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVA-AAG--FRAI--APDYRG------YGLS--DPP------AEPEKASFKDITNDLLAT 87 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~-~~~--~~vi--~~Dl~G------~G~S--~~~------~~~~~~~~~~~a~dl~~~ 87 (311)
|.|||||++++...++.++..+. +.+ -.++ -++.=| .=.. ..| .+...-++...+..+..+
T Consensus 13 PTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~v 92 (255)
T PF06028_consen 13 PTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKKV 92 (255)
T ss_dssp EEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHHH
T ss_pred cEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHHH
Confidence 89999999999999999999886 333 2333 222222 2111 111 111224788888888888
Q ss_pred HHHh----CCCcEEEEEeCcChHHHHHHHHhCCC-----ceeeEEEeccCCC
Q 021530 88 LDHL----GINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPFI 130 (311)
Q Consensus 88 l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 130 (311)
|..| +++++-+|||||||.+++.|...+.. ++.++|.|++|+.
T Consensus 93 l~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 93 LKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 8877 78999999999999999999998643 5899999998764
No 113
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=9.7e-08 Score=77.72 Aligned_cols=113 Identities=22% Similarity=0.321 Sum_probs=78.7
Q ss_pred ECCEEEEEE-ec---CCCC-ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCC-----CCC---------
Q 021530 11 VQGLNLHVA-ET---GTGP-NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDP-----PAE--------- 71 (311)
Q Consensus 11 ~~g~~i~y~-~~---G~g~-~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~-----~~~--------- 71 (311)
++|.+|.-+ .. ++++ |.||--||.+++...|..++- +...||.|+.+|-||-|.|.. +.+
T Consensus 64 ~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtr 142 (321)
T COG3458 64 YGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTR 142 (321)
T ss_pred cCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEe
Confidence 466677633 22 2233 379999999998888866553 444699999999999999843 111
Q ss_pred -----CCcCcHHHHHHHHHHHHHHh------CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 72 -----PEKASFKDITNDLLATLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 72 -----~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
.++|=+...-.|+.++++.+ .-+++.+.|.|.||.+++..|+..| |+++.+..
T Consensus 143 GilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 143 GILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred ecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 22333444555666665554 3468999999999999999999876 77888754
No 114
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.82 E-value=6e-08 Score=77.09 Aligned_cols=114 Identities=25% Similarity=0.372 Sum_probs=76.3
Q ss_pred ECCEEEEEEecC---CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCC-CCcCcHHHHHH-HHH
Q 021530 11 VQGLNLHVAETG---TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAE-PEKASFKDITN-DLL 85 (311)
Q Consensus 11 ~~g~~i~y~~~G---~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~a~-dl~ 85 (311)
.||+.+...... ..+.-|+.--+++.-...++.....+.+.||.|..+|+||-|.|++... ...+++.+++. |+-
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 378877655543 1111366566677777778877777777799999999999999986532 23467777653 555
Q ss_pred HHHHHhC----CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 86 ATLDHLG----INKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 86 ~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
+.++.++ -.+..+||||+||.+.-.+.. +| ++......+
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG 135 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFG 135 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEec
Confidence 5555543 357899999999997655444 45 444444443
No 115
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.76 E-value=3.8e-08 Score=79.77 Aligned_cols=99 Identities=26% Similarity=0.426 Sum_probs=70.6
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHHHh-------CCCcEE
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEK-ASFKDITNDLLATLDHL-------GINKVF 97 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~-~~~~~~a~dl~~~l~~l-------~~~~~~ 97 (311)
|.|+|+||+.-....|..++..+...||-||+|++-.- . ++...++ -+....++++-+-+..+ +++|+.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--F-PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--c-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 38999999998888888888999999999999998753 2 1211111 23333444444444433 457999
Q ss_pred EEEeCcChHHHHHHHHhCC-C-ceeeEEEecc
Q 021530 98 LVAKDFGARPAYLFALLHP-E-RVSGVITLGV 127 (311)
Q Consensus 98 lvGhS~Gg~ia~~~a~~~p-~-~v~~lvl~~~ 127 (311)
++|||+||..|.++|+.|. + .+.+||-+++
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDP 155 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDP 155 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccc
Confidence 9999999999999999884 2 4667776653
No 116
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.75 E-value=2.2e-07 Score=89.38 Aligned_cols=80 Identities=18% Similarity=0.124 Sum_probs=60.1
Q ss_pred HHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC--------------------CCcEEEEEeCcC
Q 021530 45 MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG--------------------INKVFLVAKDFG 104 (311)
Q Consensus 45 ~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~--------------------~~~~~lvGhS~G 104 (311)
...+.+.||.||+.|.||.|.|+.... .++. +-.+|..++++=+. -.++-++|.|+|
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPT--TGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCc--cCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 356777899999999999999986431 2222 23445444444443 258999999999
Q ss_pred hHHHHHHHHhCCCceeeEEEecc
Q 021530 105 ARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 105 g~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
|.+++..|+..|..++++|..++
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCC
Confidence 99999999999999999997653
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.75 E-value=1.1e-06 Score=75.06 Aligned_cols=237 Identities=18% Similarity=0.232 Sum_probs=126.3
Q ss_pred eEEEECCCCCchhhhHH-H-HHHHHHCCcEEEEeCCCCCCCCCCCCCCCc---CcHHHH----------HHHHHHHHHHh
Q 021530 27 VVVFLHGFPEIWYSWRH-Q-MVAVAAAGFRAIAPDYRGYGLSDPPAEPEK---ASFKDI----------TNDLLATLDHL 91 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~-~-~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~---~~~~~~----------a~dl~~~l~~l 91 (311)
.+|.+.|.+++....+. + ...|+++|+.-+.+..|=||.-.+. +... .+..++ +.-+...+++.
T Consensus 94 ~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~-~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~ 172 (348)
T PF09752_consen 94 VCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPK-DQRRSSLRNVSDLFVMGRATILESRALLHWLERE 172 (348)
T ss_pred eEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChh-HhhcccccchhHHHHHHhHHHHHHHHHHHHHHhc
Confidence 67888899886553332 2 4667777999999999999976543 2111 122221 11233445566
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCCCCCCchhhh-hcCCchhhHhhhcCccccccccCcCcHHHHHH
Q 021530 92 GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFH-KSLPEGFYISRWQEPGRAEADFGRHDAKTVVR 170 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (311)
|..++-+.|-||||.+|...|+.+|..|..+-+++... +.+ .+. ..+... -.|... .+++......+...
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~s--As~-vFt~Gvls~~---i~W~~L---~~q~~~~~~~~~~~ 243 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSS--ASV-VFTEGVLSNS---INWDAL---EKQFEDTVYEEEIS 243 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccC--CCc-chhhhhhhcC---CCHHHH---HHHhcccchhhhhc
Confidence 88999999999999999999999999877666554321 111 110 011110 112111 00000000000000
Q ss_pred HHHhhhcCCCCCCCCchhhhhhhccCCCCCCCCCCHHHHHHHHHHHccCCCCccccccccccccccCCCCCccccceEEE
Q 021530 171 NIYILFSRSEIPIAPENKEIMDLVDASTPLPPWLTAEDLATYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLI 250 (311)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i 250 (311)
. .+..... ..... ......+.+.+......+.. ++...++ ..+.-.-.+.+|
T Consensus 244 ~---------~~~~~~~----~~~~~--~~~~~~~~Ea~~~m~~~md~--~T~l~nf-----------~~P~dp~~ii~V 295 (348)
T PF09752_consen 244 D---------IPAQNKS----LPLDS--MEERRRDREALRFMRGVMDS--FTHLTNF-----------PVPVDPSAIIFV 295 (348)
T ss_pred c---------cccCccc----ccchh--hccccchHHHHHHHHHHHHh--hcccccc-----------CCCCCCCcEEEE
Confidence 0 0000000 00000 00111222222222211110 1110111 111123347899
Q ss_pred eeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCc-cccChhHHHHHHHHHHh
Q 021530 251 LGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFV-QEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 251 ~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 308 (311)
.+++|.++|.+++. .|.+..|++++.++++ ||.- ++-+.+.|.++|.+=++
T Consensus 296 ~A~~DaYVPr~~v~------~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 296 AAKNDAYVPRHGVL------SLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EecCceEechhhcc------hHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99999999876553 4778889999999986 9954 67788999999987654
No 118
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.72 E-value=1.2e-07 Score=86.08 Aligned_cols=119 Identities=17% Similarity=0.190 Sum_probs=82.0
Q ss_pred eEEEEC----CEEEEEEecC-----CCCceEEEECCCCCchhhhHHHHH------------------HHHHCCcEEEEeC
Q 021530 7 KYIKVQ----GLNLHVAETG-----TGPNVVVFLHGFPEIWYSWRHQMV------------------AVAAAGFRAIAPD 59 (311)
Q Consensus 7 ~~~~~~----g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w~~~~~------------------~l~~~~~~vi~~D 59 (311)
.+++++ +..++|.-.. ...|.||+++|.|+++..+....+ ... +..++|.+|
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iD 128 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVD 128 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEe
Confidence 467773 4578876544 122489999999999876521110 112 247999999
Q ss_pred CC-CCCCCCCCCCCCcCcHHHHHHHHHHHHHH-------hCCCcEEEEEeCcChHHHHHHHHhCC----------Cceee
Q 021530 60 YR-GYGLSDPPAEPEKASFKDITNDLLATLDH-------LGINKVFLVAKDFGARPAYLFALLHP----------ERVSG 121 (311)
Q Consensus 60 l~-G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~ 121 (311)
+| |+|.|.........+.++.++|+.++++. ++-.+++|+|||+||.++-.+|..-- =.+++
T Consensus 129 qP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkG 208 (462)
T PTZ00472 129 QPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAG 208 (462)
T ss_pred CCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEE
Confidence 75 88888654322335678899999999985 34578999999999999988877521 13677
Q ss_pred EEEec
Q 021530 122 VITLG 126 (311)
Q Consensus 122 lvl~~ 126 (311)
+++.+
T Consensus 209 i~IGN 213 (462)
T PTZ00472 209 LAVGN 213 (462)
T ss_pred EEEec
Confidence 77655
No 119
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.72 E-value=6.1e-08 Score=79.37 Aligned_cols=83 Identities=14% Similarity=0.140 Sum_probs=48.7
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHH--CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHH----HHHHHHHHhCCC--cEE
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAA--AGFRAIAPDYRGYGLSDPPAEPEKASFKDITN----DLLATLDHLGIN--KVF 97 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~----dl~~~l~~l~~~--~~~ 97 (311)
+.|||+||+.++..+|...-..+.. ..+.-..+...++-..... ...+++..++ .|.+.++....+ +++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 4799999999999999866555443 1222112222333222111 1224555444 444444444443 899
Q ss_pred EEEeCcChHHHHHH
Q 021530 98 LVAKDFGARPAYLF 111 (311)
Q Consensus 98 lvGhS~Gg~ia~~~ 111 (311)
+|||||||.|+-.+
T Consensus 82 fIgHSLGGli~r~a 95 (217)
T PF05057_consen 82 FIGHSLGGLIARYA 95 (217)
T ss_pred EEEecccHHHHHHH
Confidence 99999999998543
No 120
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.71 E-value=1.4e-08 Score=88.02 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=60.3
Q ss_pred ceEEEECCCCCch--hhhHHH-HHHHHH---CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----h--CC
Q 021530 26 NVVVFLHGFPEIW--YSWRHQ-MVAVAA---AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----L--GI 93 (311)
Q Consensus 26 ~~vvllHG~~~~~--~~w~~~-~~~l~~---~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~----l--~~ 93 (311)
|++|++|||.++. ..|-.. ...+.+ .+++||++|....-...-. .........++.+..+++. . ..
T Consensus 72 pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~--~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 72 PTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP--QAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp EEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH--HHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc--chhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 4899999998877 456543 344544 3699999998643211000 0001222333444444433 3 35
Q ss_pred CcEEEEEeCcChHHHHHHHHhCCC--ceeeEEEeccC
Q 021530 94 NKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVP 128 (311)
Q Consensus 94 ~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 128 (311)
++++|||||+|+.||-..+..... ++.+++.++++
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 789999999999999999888777 89999999853
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.67 E-value=6.4e-08 Score=79.03 Aligned_cols=87 Identities=21% Similarity=0.185 Sum_probs=50.9
Q ss_pred eEEEECCCCCchhhhHHHHHHHH---HC-CcEEEEeCCCC-----CCCCCC------------C-----CC----CCcCc
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVA---AA-GFRAIAPDYRG-----YGLSDP------------P-----AE----PEKAS 76 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~---~~-~~~vi~~Dl~G-----~G~S~~------------~-----~~----~~~~~ 76 (311)
-||||||++.|...|..++..|- .+ ++..+.+|=|= -|-... + .. .....
T Consensus 6 riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 85 (212)
T PF03959_consen 6 RILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEYEG 85 (212)
T ss_dssp EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG--
T ss_pred eEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccccC
Confidence 69999999999999988776543 23 68888877432 111100 0 00 01235
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+++..+.+.+.+++.|. =.-|+|+|.||.+|..+++.
T Consensus 86 ~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~ 122 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLAL 122 (212)
T ss_dssp -HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHH
Confidence 67777888888888773 24699999999999988864
No 122
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.66 E-value=2.3e-07 Score=75.27 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=70.2
Q ss_pred EECCC--CCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-hCCCcEEEEEeCcChH
Q 021530 30 FLHGF--PEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-LGINKVFLVAKDFGAR 106 (311)
Q Consensus 30 llHG~--~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-l~~~~~~lvGhS~Gg~ 106 (311)
|+|+- +++...|..+...+.. .++|+++|++|+|.+.... .+++.+++++.+.+.+ ....+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 45553 3677788887777654 6999999999999775432 4677777766655443 4467899999999999
Q ss_pred HHHHHHHh---CCCceeeEEEecc
Q 021530 107 PAYLFALL---HPERVSGVITLGV 127 (311)
Q Consensus 107 ia~~~a~~---~p~~v~~lvl~~~ 127 (311)
++..++.. .++++.++++++.
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEcc
Confidence 99988886 4567899988864
No 123
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.61 E-value=9.2e-08 Score=78.05 Aligned_cols=49 Identities=20% Similarity=0.328 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHh-CC--CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 79 DITNDLLATLDHL-GI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 79 ~~a~dl~~~l~~l-~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
++-+..+++|... .+ +++.|+|.|.||-+|+.+|..+| .|+.+|.++++
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 3455666666665 33 58999999999999999999999 79999988753
No 124
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=2.9e-07 Score=80.35 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=75.2
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcE---EEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFR---AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~---vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (311)
|+|++||+..+...|..+...+...++. ++.++.++-..+. ...-.-+++-.-+.+++...+.+++.|+||||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY----SLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc----cccccHHHHHHHHHHHHhhcCCCceEEEeecc
Confidence 8999999988888887655554444566 8888888662111 12335556666667777778889999999999
Q ss_pred ChHHHHHHHHhCC--CceeeEEEeccC
Q 021530 104 GARPAYLFALLHP--ERVSGVITLGVP 128 (311)
Q Consensus 104 Gg~ia~~~a~~~p--~~v~~lvl~~~~ 128 (311)
||.++..++..++ .+|++++.+++|
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEEeccC
Confidence 9999999999988 899999999875
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.54 E-value=1.1e-06 Score=71.51 Aligned_cols=102 Identities=18% Similarity=0.169 Sum_probs=65.5
Q ss_pred ceEEEECCCCCchhhhHHH--HHHHHH-CCcEEEEeCCCCCC--CCCCC--C--CC-CcCcHHHHHHHHHHHHHHhCC--
Q 021530 26 NVVVFLHGFPEIWYSWRHQ--MVAVAA-AGFRAIAPDYRGYG--LSDPP--A--EP-EKASFKDITNDLLATLDHLGI-- 93 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~--~~~l~~-~~~~vi~~Dl~G~G--~S~~~--~--~~-~~~~~~~~a~dl~~~l~~l~~-- 93 (311)
|.||++||.+++...+... +..+.+ .+|-|+.|+...-. ...+. . .. ..-....+++.+.++.+..++
T Consensus 17 PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~ 96 (220)
T PF10503_consen 17 PLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDP 96 (220)
T ss_pred CEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCC
Confidence 4799999999998876542 223433 47889999864211 11110 0 00 001122223333334445555
Q ss_pred CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 94 NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 94 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+++.+.|+|.||..+..+++.|||++.++...+.
T Consensus 97 ~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 97 SRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred CceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 5899999999999999999999999999887654
No 126
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.53 E-value=7.2e-07 Score=77.05 Aligned_cols=100 Identities=21% Similarity=0.322 Sum_probs=59.1
Q ss_pred ceEEEECCCCCchhh--------------h----HHHHHHHHHCCcEEEEeCCCCCCCCCCCCC---CCcCcHHHHHH--
Q 021530 26 NVVVFLHGFPEIWYS--------------W----RHQMVAVAAAGFRAIAPDYRGYGLSDPPAE---PEKASFKDITN-- 82 (311)
Q Consensus 26 ~~vvllHG~~~~~~~--------------w----~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---~~~~~~~~~a~-- 82 (311)
|.||++||-++.... | ......|.+.||-|+++|.+|+|+...... ...++...++.
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 379999998765432 1 113456778899999999999999865431 11233333333
Q ss_pred -------------HHHHHHHHh------CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 83 -------------DLLATLDHL------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 83 -------------dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
|....+|-| .-+++-++|+||||..++.+|+.. +||+..|..+
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 222233333 225899999999999999999986 6888888665
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.52 E-value=1.3e-06 Score=74.26 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=71.7
Q ss_pred CCEEEEEEec-----CCCC-ceEEEECCCCCch-hhhHHH--HH-------HHHHCCcEEEEeCCCCCCCCCCCCCCCcC
Q 021530 12 QGLNLHVAET-----GTGP-NVVVFLHGFPEIW-YSWRHQ--MV-------AVAAAGFRAIAPDYRGYGLSDPPAEPEKA 75 (311)
Q Consensus 12 ~g~~i~y~~~-----G~g~-~~vvllHG~~~~~-~~w~~~--~~-------~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (311)
||++|....+ +.++ |+||..|+.+.+. ...... .+ .+.+.||-||..|.||.|.|+......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 5666664332 2333 4788888888653 212211 01 267789999999999999998643221
Q ss_pred cHHHHHH---HHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 76 SFKDITN---DLLATLDHLGI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 76 ~~~~~a~---dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
...-++ |+++.+.+... .+|-++|.|++|..++..|+..|..+++++...+
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 222333 55555555554 3799999999999999999988889999987654
No 128
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.49 E-value=4.2e-07 Score=80.11 Aligned_cols=124 Identities=24% Similarity=0.353 Sum_probs=90.4
Q ss_pred cceeEEEE-CCEEEEEEecC----CCCceEEEECCCCCchhhhHHHH------HHHHHCCcEEEEeCCCCCCCCCCCC--
Q 021530 4 IEHKYIKV-QGLNLHVAETG----TGPNVVVFLHGFPEIWYSWRHQM------VAVAAAGFRAIAPDYRGYGLSDPPA-- 70 (311)
Q Consensus 4 ~~~~~~~~-~g~~i~y~~~G----~g~~~vvllHG~~~~~~~w~~~~------~~l~~~~~~vi~~Dl~G~G~S~~~~-- 70 (311)
.+...+++ ||+-+...... ..| ||+|.||+-.++..|-... -.|.+.||.|=.-..||.-.|.+..
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp-~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l 126 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRP-VVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL 126 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCC-cEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc
Confidence 34556666 99865554332 334 8999999999999996432 2345679999999999988886531
Q ss_pred ------CCCcCcHHHHHH-HHHHHHHH----hCCCcEEEEEeCcChHHHHHHHHhCCC---ceeeEEEeccC
Q 021530 71 ------EPEKASFKDITN-DLLATLDH----LGINKVFLVAKDFGARPAYLFALLHPE---RVSGVITLGVP 128 (311)
Q Consensus 71 ------~~~~~~~~~~a~-dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 128 (311)
.-..+|+++++. ||-+.+|. -+.++.+.||||.|+.+...+....|+ +|+.+++++++
T Consensus 127 ~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 127 SPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPA 198 (403)
T ss_pred CCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecch
Confidence 123567777644 55554444 477899999999999999999888875 78999988754
No 129
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.48 E-value=4.5e-05 Score=66.04 Aligned_cols=98 Identities=22% Similarity=0.212 Sum_probs=66.7
Q ss_pred ceEEEECCCC---C--chhhhHHHHHHHH-HCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----h--CC
Q 021530 26 NVVVFLHGFP---E--IWYSWRHQMVAVA-AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----L--GI 93 (311)
Q Consensus 26 ~~vvllHG~~---~--~~~~w~~~~~~l~-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~----l--~~ 93 (311)
|.||++||++ + ++..++.....+. +.+.-||.+|+|=--+...|. .+++-.+.+.-+.+. . +.
T Consensus 91 p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa-----~y~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 91 PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA-----AYDDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-----cchHHHHHHHHHHHhHHHHhCCCc
Confidence 4799999975 2 3445666666553 347889999988755554332 444444444444443 2 45
Q ss_pred CcEEEEEeCcChHHHHHHHHhC------CCceeeEEEeccC
Q 021530 94 NKVFLVAKDFGARPAYLFALLH------PERVSGVITLGVP 128 (311)
Q Consensus 94 ~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~ 128 (311)
+++.|+|-|-||.||..+|.+. +-++++.|++-+.
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 7899999999999999887753 3578899988643
No 130
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.47 E-value=2.3e-06 Score=70.92 Aligned_cols=119 Identities=23% Similarity=0.280 Sum_probs=80.3
Q ss_pred eeEEEECCEEEEEEec---C--CCCceEEEECCCCCchh------hhHHHHHHHHHCCcEEEEeCC-------CCCCCCC
Q 021530 6 HKYIKVQGLNLHVAET---G--TGPNVVVFLHGFPEIWY------SWRHQMVAVAAAGFRAIAPDY-------RGYGLSD 67 (311)
Q Consensus 6 ~~~~~~~g~~i~y~~~---G--~g~~~vvllHG~~~~~~------~w~~~~~~l~~~~~~vi~~Dl-------~G~G~S~ 67 (311)
...+.++|.+-.|..+ | +++|.||.+||..++.. .|+.++. .++|-|++||- .|+|.+-
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCcccccC
Confidence 3456677776666543 2 45557999999987765 4554432 34899999951 2233331
Q ss_pred CCCC--CCcCcHHHHHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 68 PPAE--PEKASFKDITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 68 ~~~~--~~~~~~~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
.+.+ .+.-....+++.+..+..+.+++ +|++.|.|-||.++..+++.+|+.+.++.+++.
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 1111 11123444556666666777887 899999999999999999999999999987764
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.47 E-value=1.2e-06 Score=68.56 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=63.8
Q ss_pred EEecC--CCCceEEEECCCC---Cchh-hhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH----
Q 021530 18 VAETG--TGPNVVVFLHGFP---EIWY-SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT---- 87 (311)
Q Consensus 18 y~~~G--~g~~~vvllHG~~---~~~~-~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~---- 87 (311)
+.++| +..+..||+||.- ++.. ... .+..+...+|+|... |||.+.. ..++.+...+....
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~cls-iv~~a~~~gY~vasv---gY~l~~q-----~htL~qt~~~~~~gv~fi 128 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLS-IVGPAVRRGYRVASV---GYNLCPQ-----VHTLEQTMTQFTHGVNFI 128 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccc-hhhhhhhcCeEEEEe---ccCcCcc-----cccHHHHHHHHHHHHHHH
Confidence 34555 2333789999962 2222 222 334455668999987 6888742 23666655555443
Q ss_pred HHHh-CCCcEEEEEeCcChHHHHHHHHh-CCCceeeEEEecc
Q 021530 88 LDHL-GINKVFLVAKDFGARPAYLFALL-HPERVSGVITLGV 127 (311)
Q Consensus 88 l~~l-~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~ 127 (311)
++.. +.+++.+-|||-|+.+|+....+ +..||.++++.++
T Consensus 129 lk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 129 LKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred HHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 3333 34668888999999998875554 5668888887763
No 132
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.44 E-value=1.1e-06 Score=72.55 Aligned_cols=102 Identities=20% Similarity=0.180 Sum_probs=61.8
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHH-HCC--cEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----hCCCc
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVA-AAG--FRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----LGINK 95 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~-~~~--~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~----l~~~~ 95 (311)
.++ .+|||||+..+...-...+..+. ..+ -.+|.+..|..|.-..-. .+..+...-+..+.++++. .+.++
T Consensus 17 ~~~-vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~-~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 17 DKE-VLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYF-YDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCe-EEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhh-hhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 344 89999999888664322222222 122 379999999988631100 0112333334444455444 46789
Q ss_pred EEEEEeCcChHHHHHHHHh----CC-----CceeeEEEec
Q 021530 96 VFLVAKDFGARPAYLFALL----HP-----ERVSGVITLG 126 (311)
Q Consensus 96 ~~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~ 126 (311)
++|++||||+.+.+..... .+ .++..+++.+
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 9999999999998865332 21 2566777765
No 133
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.41 E-value=3.5e-06 Score=66.38 Aligned_cols=98 Identities=18% Similarity=0.330 Sum_probs=68.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCC--------CCCCCCCCC--------CCCcCcHHHHHHHHHHHHHH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYR--------GYGLSDPPA--------EPEKASFKDITNDLLATLDH 90 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~--------G~G~S~~~~--------~~~~~~~~~~a~dl~~~l~~ 90 (311)
+||++||.+++...|...+..+...+.+.|+|--| |.+...+-. ..+.-++...++-+..++++
T Consensus 5 tIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~~ 84 (206)
T KOG2112|consen 5 TIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLIDN 84 (206)
T ss_pred EEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHHH
Confidence 79999999999999987666554456788888333 222111100 01234666677777777776
Q ss_pred h---CC--CcEEEEEeCcChHHHHHHHHhCCCceeeEEE
Q 021530 91 L---GI--NKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (311)
Q Consensus 91 l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 124 (311)
. |+ +++.+-|.|+||.+++..+..+|..+.+...
T Consensus 85 e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~ 123 (206)
T KOG2112|consen 85 EPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFA 123 (206)
T ss_pred HHHcCCCccceeEcccCchHHHHHHHHhccccccceeec
Confidence 4 44 5789999999999999999999876666653
No 134
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=2.8e-05 Score=74.87 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=83.8
Q ss_pred cceeEEEECCEEEEEEecC-------CCCceEEEECCCCCch-------hhhHHHHHHHHHCCcEEEEeCCCCCCCCCCC
Q 021530 4 IEHKYIKVQGLNLHVAETG-------TGPNVVVFLHGFPEIW-------YSWRHQMVAVAAAGFRAIAPDYRGYGLSDPP 69 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~G-------~g~~~vvllHG~~~~~-------~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~ 69 (311)
++...+..+|+..+|...= +..|.||.+||.|++. -+|..+ .....++-|+.+|-||-|.....
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchh
Confidence 3445666699988877542 1224789999999622 246554 34556899999999999887643
Q ss_pred C------CCCcCcHHHHHHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHhCCCceeeE-EEec
Q 021530 70 A------EPEKASFKDITNDLLATLDHLGI--NKVFLVAKDFGARPAYLFALLHPERVSGV-ITLG 126 (311)
Q Consensus 70 ~------~~~~~~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~ 126 (311)
- +-.....++....+..+++..-+ +++.+.|||.||.++..+...+|+.+.+. +.++
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvava 641 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVA 641 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEec
Confidence 1 11234555555556666666544 57999999999999999999999776666 5554
No 135
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.38 E-value=3.3e-06 Score=68.23 Aligned_cols=103 Identities=19% Similarity=0.214 Sum_probs=75.5
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCc------EEEEeCCCCC----CCCCCC-C--------CCCcCcHHHHHHHHHHH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGF------RAIAPDYRGY----GLSDPP-A--------EPEKASFKDITNDLLAT 87 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~------~vi~~Dl~G~----G~S~~~-~--------~~~~~~~~~~a~dl~~~ 87 (311)
|.+||||.+++......++..+..+ + =++..|--|- |.=++. . ....-+..+++..+..+
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 7899999999999999999888764 4 2445555551 100110 0 11234667778888888
Q ss_pred HHHh----CCCcEEEEEeCcChHHHHHHHHhCCC-----ceeeEEEeccCCC
Q 021530 88 LDHL----GINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPFI 130 (311)
Q Consensus 88 l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 130 (311)
|..| +++++.+|||||||.-...|+..|.+ .+..+|.+++++.
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 8777 68999999999999999999988753 4888999987754
No 136
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.37 E-value=3.4e-06 Score=67.00 Aligned_cols=67 Identities=22% Similarity=0.285 Sum_probs=45.0
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCC-CeEEEEeCCCCCCcc-----ccChh------HHHHHHHHHHhh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQ-----EQSPE------EVNQLVLTFLNK 309 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~gH~~~-----~e~p~------~~~~~i~~Fl~~ 309 (311)
.+++|+|++.|+.|.++|+..+....+ .+++... +++++++++.||... .+.|| +.-+.+.+|+.+
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee--~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEE--KLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHH--HHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998876654432 2333221 368999999999665 34554 344555566654
Q ss_pred C
Q 021530 310 H 310 (311)
Q Consensus 310 ~ 310 (311)
+
T Consensus 240 y 240 (242)
T KOG3043|consen 240 Y 240 (242)
T ss_pred h
Confidence 3
No 137
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.36 E-value=2.1e-06 Score=72.30 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=67.6
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH-HHHhCC--CcEEEE
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT-LDHLGI--NKVFLV 99 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~-l~~l~~--~~~~lv 99 (311)
+|..-|+|.-|..+=.+. . .+..-.+.+|.|+-+.+|||+.|...+ ....-...+|.+.++ +..||. +.++|.
T Consensus 241 ngq~LvIC~EGNAGFYEv-G-~m~tP~~lgYsvLGwNhPGFagSTG~P--~p~n~~nA~DaVvQfAI~~Lgf~~edIily 316 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV-G-VMNTPAQLGYSVLGWNHPGFAGSTGLP--YPVNTLNAADAVVQFAIQVLGFRQEDIILY 316 (517)
T ss_pred CCceEEEEecCCccceEe-e-eecChHHhCceeeccCCCCccccCCCC--CcccchHHHHHHHHHHHHHcCCCccceEEE
Confidence 455357777775432221 1 111223458999999999999997654 222333445555554 566765 579999
Q ss_pred EeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 100 AKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 100 GhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
|||.||.-+.-.|..||| |+++|+-+
T Consensus 317 gWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 317 GWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred EeecCCchHHHHhhcCCC-ceEEEeec
Confidence 999999999999999998 78888644
No 138
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.35 E-value=1.7e-05 Score=63.05 Aligned_cols=58 Identities=21% Similarity=0.452 Sum_probs=43.2
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
.+++|+|-|.|+.|.+++.. ++..|.+.++++.+.+-+ +||+++-.+ ...+.|.+|++
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~------~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSE------RSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCCeeEEecccceeecch------HHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHH
Confidence 58999999999999999643 245677888988555554 799998776 44555666664
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.32 E-value=1.7e-05 Score=67.36 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=68.8
Q ss_pred EEEECCEEEEEEecC-----CCCceEEEECCCCCchhhh------HHHHHHHH-HCCcEEEEeCCCCCCCCCCCCCCCcC
Q 021530 8 YIKVQGLNLHVAETG-----TGPNVVVFLHGFPEIWYSW------RHQMVAVA-AAGFRAIAPDYRGYGLSDPPAEPEKA 75 (311)
Q Consensus 8 ~~~~~g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w------~~~~~~l~-~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (311)
.+..|++.|--.... ++. .||+.-|.++..+.- +..+..+. +.+-+|+.+.+||.|.|..+.
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~R-WiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----- 189 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQR-WILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----- 189 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCc-EEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----
Confidence 345588877654443 233 799999987766551 11222333 347999999999999996543
Q ss_pred cHHHHHHHHHHHHHHh-----CC--CcEEEEEeCcChHHHHHHHHhC
Q 021530 76 SFKDITNDLLATLDHL-----GI--NKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l-----~~--~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+.++++.|-.+.++.| |+ +++.+.|||+||.|+.....++
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4567766666655554 33 6799999999999988754444
No 140
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.31 E-value=1.7e-06 Score=70.56 Aligned_cols=95 Identities=23% Similarity=0.288 Sum_probs=56.0
Q ss_pred EEEECCCC---CchhhhHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-----hCCCcEEE
Q 021530 28 VVFLHGFP---EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH-----LGINKVFL 98 (311)
Q Consensus 28 vvllHG~~---~~~~~w~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~-----l~~~~~~l 98 (311)
||++||.+ ++..........+.+ .++.|+.+|.|=..... ..-.+++..+-+.-+++. .+.++++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 78999864 232222234445553 68999999999432211 111333333333334444 34578999
Q ss_pred EEeCcChHHHHHHHHhCCC----ceeeEEEecc
Q 021530 99 VAKDFGARPAYLFALLHPE----RVSGVITLGV 127 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~ 127 (311)
+|+|-||.+|+.++....+ .+++++++++
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 9999999999999986544 3788888764
No 141
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.30 E-value=9.9e-05 Score=66.01 Aligned_cols=203 Identities=15% Similarity=0.223 Sum_probs=105.6
Q ss_pred HHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC-----CCcEEEEEeCcChHHHHHHHHhCCCce
Q 021530 45 MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-----INKVFLVAKDFGARPAYLFALLHPERV 119 (311)
Q Consensus 45 ~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v 119 (311)
+...+..|+.|+.+...- ++. ..-|+.+.+....+|+++.. ..|+.|+|.+.||+.++.+|+.+|+.+
T Consensus 93 vG~AL~~GHPvYFV~F~p----~P~---pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFP----EPE---PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHcCCCeEEEEecC----CCC---CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 333345588888775432 111 23488887777777776652 248999999999999999999999999
Q ss_pred eeEEEeccC--CCC----CCchhhhhcCCchhhHhhhc-Cc--cccc-----cccCcCc-HHHHHHHHHhhhcCCCCCCC
Q 021530 120 SGVITLGVP--FIP----PGTAEFHKSLPEGFYISRWQ-EP--GRAE-----ADFGRHD-AKTVVRNIYILFSRSEIPIA 184 (311)
Q Consensus 120 ~~lvl~~~~--~~~----~~~~~~~~~~~~~~~~~~~~-~~--~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 184 (311)
..+|+-++| ++. .+|-++..-+..+.+...+. .. +... ..|.... ....+++.|..|...+.+.
T Consensus 166 gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~e~- 244 (581)
T PF11339_consen 166 GPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDTER- 244 (581)
T ss_pred CceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCCch-
Confidence 999987765 222 12222221111111100000 00 0000 0111111 2355666666665554332
Q ss_pred CchhhhhhhccCCCCCCCCCCHHHHHHHH-HHHccCCCCccccccccccccccCCCCCccccceEEEeeCCcccCCCCCc
Q 021530 185 PENKEIMDLVDASTPLPPWLTAEDLATYG-ALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGI 263 (311)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L~i~G~~D~~~~~~~~ 263 (311)
....++.++++.. ..++.+...... +.+..+.+... . ++ ........+.+|+||+.+.++.-|.++|++.+
T Consensus 245 ~Rfl~FErWwgg~----~~l~~~ei~~Iv~nLFvgNrL~~g-~--~~-~~~G~~~DLr~Ir~Piivfas~gDnITPP~Qa 316 (581)
T PF11339_consen 245 ERFLEFERWWGGF----YDLNGEEILWIVENLFVGNRLAKG-E--FR-VSDGRRVDLRNIRSPIIVFASYGDNITPPQQA 316 (581)
T ss_pred hhhhHHHHHhCCc----cCCCHHHHHHHHHHHhccchhccC-c--ee-ccCCcEeehhhCCCCEEEEeccCCCCCChhHh
Confidence 2233344444321 234444333322 22221111110 0 00 01112233458999999999999999988654
No 142
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.23 E-value=2.1e-06 Score=76.08 Aligned_cols=101 Identities=21% Similarity=0.227 Sum_probs=58.7
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCC-CCCCCC-CCC--------------------------CcCc-
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGY-GLSDPP-AEP--------------------------EKAS- 76 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~-~~~--------------------------~~~~- 76 (311)
|+|||-||++++...+..++..|...||-|+++|.|.. +-.... .+. ..+.
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFEL 180 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHH
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHH
Confidence 48999999999999999999999999999999999964 210000 000 0000
Q ss_pred -HHHH---HHHHHHHHHHh--------------------------CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 77 -FKDI---TNDLLATLDHL--------------------------GINKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 77 -~~~~---a~dl~~~l~~l--------------------------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
-.++ ++++...++.| +++++.++|||+||..++..+... .+++..|+++
T Consensus 181 R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD 259 (379)
T PF03403_consen 181 RNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeC
Confidence 1111 22233333222 246899999999999999877765 6788888887
Q ss_pred c
Q 021530 127 V 127 (311)
Q Consensus 127 ~ 127 (311)
+
T Consensus 260 ~ 260 (379)
T PF03403_consen 260 P 260 (379)
T ss_dssp -
T ss_pred C
Confidence 4
No 143
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.18 E-value=0.00062 Score=59.11 Aligned_cols=96 Identities=22% Similarity=0.209 Sum_probs=59.7
Q ss_pred ceEEEECCCC---Cchhhh-HHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH---HHhC--CCcE
Q 021530 26 NVVVFLHGFP---EIWYSW-RHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL---DHLG--INKV 96 (311)
Q Consensus 26 ~~vvllHG~~---~~~~~w-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l---~~l~--~~~~ 96 (311)
|+||++||.+ ++.... ..........++.|+.+|+|=--+-..+ ..+++..+-+..+. ++++ .+++
T Consensus 80 p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p-----~~~~d~~~a~~~l~~~~~~~g~dp~~i 154 (312)
T COG0657 80 PVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP-----AALEDAYAAYRWLRANAAELGIDPSRI 154 (312)
T ss_pred cEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC-----chHHHHHHHHHHHHhhhHhhCCCccce
Confidence 3899999974 333333 3333333456999999999976544322 23334222222222 2344 4689
Q ss_pred EEEEeCcChHHHHHHHHhCCC----ceeeEEEec
Q 021530 97 FLVAKDFGARPAYLFALLHPE----RVSGVITLG 126 (311)
Q Consensus 97 ~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~ 126 (311)
.|.|+|-||.+++.++..-.+ .....+++.
T Consensus 155 ~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~ 188 (312)
T COG0657 155 AVAGDSAGGHLALALALAARDRGLPLPAAQVLIS 188 (312)
T ss_pred EEEecCcccHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 999999999999998886544 345555554
No 144
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.17 E-value=4.5e-06 Score=70.04 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=63.4
Q ss_pred ceEEEECCCCCchhhhH--HHHHHHHHCC----cEEEEeCCCCCCCC--CCC---------C-CCCcCcHH-HHHHHHHH
Q 021530 26 NVVVFLHGFPEIWYSWR--HQMVAVAAAG----FRAIAPDYRGYGLS--DPP---------A-EPEKASFK-DITNDLLA 86 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~--~~~~~l~~~~----~~vi~~Dl~G~G~S--~~~---------~-~~~~~~~~-~~a~dl~~ 86 (311)
|+|+++||.......|. ..+..+.+.+ .-+|+++.-+.+.. ... . ......+. -+.++|..
T Consensus 25 PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p 104 (251)
T PF00756_consen 25 PVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELIP 104 (251)
T ss_dssp EEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHHH
T ss_pred EEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccchh
Confidence 47999999733333332 2222233322 45677776665511 000 0 11112333 35667777
Q ss_pred HHHHh-CCC--cEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 87 TLDHL-GIN--KVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 87 ~l~~l-~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
.+++. .+. +..|.|+||||..|+.++.+||+.+.+++.+++
T Consensus 105 ~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 105 YIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSG 148 (251)
T ss_dssp HHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESE
T ss_pred HHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCc
Confidence 77764 332 269999999999999999999999999999874
No 145
>PLN02606 palmitoyl-protein thioesterase
Probab=98.15 E-value=1.6e-05 Score=66.95 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=60.2
Q ss_pred ceEEEECCCC--CchhhhHHHHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH---HHHhCCCcEEEE
Q 021530 26 NVVVFLHGFP--EIWYSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT---LDHLGINKVFLV 99 (311)
Q Consensus 26 ~~vvllHG~~--~~~~~w~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~---l~~l~~~~~~lv 99 (311)
.|||+.||++ ++...+..+...+.+ .++.+.++- .|-|..+ .--..+.++++.+-+- ++.|. +-+++|
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~----s~~~~~~~Qv~~vce~l~~~~~L~-~G~naI 100 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD----SLFMPLRQQASIACEKIKQMKELS-EGYNIV 100 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc----ccccCHHHHHHHHHHHHhcchhhc-CceEEE
Confidence 3899999999 444456655554431 255555554 3323211 0112333333333222 22333 359999
Q ss_pred EeCcChHHHHHHHHhCCC--ceeeEEEeccC
Q 021530 100 AKDFGARPAYLFALLHPE--RVSGVITLGVP 128 (311)
Q Consensus 100 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 128 (311)
|+|-||.++-.++.+.|+ .|+.+|.+++|
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999999988 59999999865
No 146
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.13 E-value=3.4e-05 Score=66.02 Aligned_cols=49 Identities=22% Similarity=0.313 Sum_probs=37.7
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccC-CCeEEEEeCCCCCCcc
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFV-PNLEIIRLSEGSHFVQ 292 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~~~gH~~~ 292 (311)
..+.|+++.+|..|.++|+.....+. +++.+.- .+.+++.++..+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~--~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALV--AKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHH--HHHHHcCCCCEEEEecCCCChhhh
Confidence 45899999999999999887665544 2355555 5788899999999754
No 147
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.13 E-value=2.4e-05 Score=60.05 Aligned_cols=89 Identities=18% Similarity=0.219 Sum_probs=62.6
Q ss_pred eEEEECCCCCchh-hhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWY-SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~-~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 105 (311)
.+|.|||+.+|.. .|....+.-. -.+-.+++ .+.....++++.+.|.+-+.+. -++++||+||+|+
T Consensus 4 ~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq---------~~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc 70 (181)
T COG3545 4 DVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQ---------DDWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGC 70 (181)
T ss_pred eEEEecCCCCCChhHHHHHHHhhC---ccchhccc---------CCCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccH
Confidence 6899999976554 5876554321 11112221 1223457788888887777766 3459999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccC
Q 021530 106 RPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 106 ~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
..+.+++......|++..+++++
T Consensus 71 ~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCC
Confidence 99999999887799999999754
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.12 E-value=2.8e-05 Score=69.74 Aligned_cols=100 Identities=17% Similarity=0.238 Sum_probs=62.8
Q ss_pred ceEEEECCCC--CchhhhHHHHHHHHHCC----cEEEEeCCCCC-CCCCCCCCCCcCcHHHHHHHHHHHHHHh-----CC
Q 021530 26 NVVVFLHGFP--EIWYSWRHQMVAVAAAG----FRAIAPDYRGY-GLSDPPAEPEKASFKDITNDLLATLDHL-----GI 93 (311)
Q Consensus 26 ~~vvllHG~~--~~~~~w~~~~~~l~~~~----~~vi~~Dl~G~-G~S~~~~~~~~~~~~~~a~dl~~~l~~l-----~~ 93 (311)
|.|+|+||.. .....+ ..+..+.+.+ .-+|.+|-.+- .++..... ..--...++++|+-++++. +-
T Consensus 210 PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 210 PLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 4789999953 222222 2344455444 34688886321 11111110 1111233567777777775 23
Q ss_pred CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 94 NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 94 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
++..|.|+||||..|+.++++||+++.+++.+++
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEecc
Confidence 5689999999999999999999999999998874
No 149
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.08 E-value=9.2e-06 Score=69.82 Aligned_cols=92 Identities=22% Similarity=0.244 Sum_probs=63.9
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCC--CCCCCCCCCC-----------CcCcHHHHHHHHHHH-----
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRG--YGLSDPPAEP-----------EKASFKDITNDLLAT----- 87 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G--~G~S~~~~~~-----------~~~~~~~~a~dl~~~----- 87 (311)
|.||+-||.+++-..|....+.+.+.||-|.++|.|| .|........ ..+.+..+.+.+.+.
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~ 151 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPA 151 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcc
Confidence 3789999999999999999999998899999999999 3333221111 112233333333332
Q ss_pred -HHHhCCCcEEEEEeCcChHHHHHHHHhCCC
Q 021530 88 -LDHLGINKVFLVAKDFGARPAYLFALLHPE 117 (311)
Q Consensus 88 -l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 117 (311)
-+++...++-++|||+||+-++..+.-..+
T Consensus 152 l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 152 LAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccCccceEEEecccccHHHHHhcccccc
Confidence 222345689999999999999988775543
No 150
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=0.00024 Score=64.97 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=72.3
Q ss_pred ceEEEECCCCCch-----hhhHHH--HHHHHHCCcEEEEeCCCCCCCCCCC------CCCCcCcHHHHHHHHHHHHHHhC
Q 021530 26 NVVVFLHGFPEIW-----YSWRHQ--MVAVAAAGFRAIAPDYRGYGLSDPP------AEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 26 ~~vvllHG~~~~~-----~~w~~~--~~~l~~~~~~vi~~Dl~G~G~S~~~------~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
|+++++=|.|+-. ..|... +..|...||-|+++|-||--.-... .......++++++-+.-+.++.|
T Consensus 643 ptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g 722 (867)
T KOG2281|consen 643 PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 (867)
T ss_pred ceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC
Confidence 4899999988532 222211 2355667999999999996544322 12234567788888888888875
Q ss_pred ---CCcEEEEEeCcChHHHHHHHHhCCCceeeEEE
Q 021530 93 ---INKVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (311)
Q Consensus 93 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 124 (311)
.+++.+.|||.||.+++...++||+-++..|.
T Consensus 723 fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred cccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 47899999999999999999999987666553
No 151
>PRK04940 hypothetical protein; Provisional
Probab=98.02 E-value=2.2e-05 Score=61.33 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=47.6
Q ss_pred EEEECCCCCchhh--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh---C-CCcEEEEEe
Q 021530 28 VVFLHGFPEIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL---G-INKVFLVAK 101 (311)
Q Consensus 28 vvllHG~~~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l---~-~~~~~lvGh 101 (311)
||.+|||.+|..+ .+-. .+ . .+.+|.+=+-.| ..+..+-++.+.++++++ + .+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~--~l---~--~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVL--QL---Q--FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHH--hh---e--eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999988877 5422 11 1 112332222111 012222233344444431 1 257999999
Q ss_pred CcChHHHHHHHHhCCCceeeEEEecc
Q 021530 102 DFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 102 S~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
|+||..|..+|.+|. +++ |++++
T Consensus 68 SLGGyyA~~La~~~g--~~a-VLiNP 90 (180)
T PRK04940 68 GLGGYWAERIGFLCG--IRQ-VIFNP 90 (180)
T ss_pred ChHHHHHHHHHHHHC--CCE-EEECC
Confidence 999999999999985 444 44664
No 152
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.98 E-value=4e-05 Score=64.61 Aligned_cols=94 Identities=14% Similarity=0.143 Sum_probs=60.7
Q ss_pred eEEEECCCCCchhh-----hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH---HHhCCCcEEE
Q 021530 27 VVVFLHGFPEIWYS-----WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL---DHLGINKVFL 98 (311)
Q Consensus 27 ~vvllHG~~~~~~~-----w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l---~~l~~~~~~l 98 (311)
|+|+.||+++++.. +..++..+ .|..++++.. |.|.. +.-...+.++++.+-+-+ ..|. +-+++
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~--~g~~~~~i~i---g~~~~--~s~~~~~~~Qve~vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNL--SGSPGFCLEI---GNGVG--DSWLMPLTQQAEIACEKVKQMKELS-QGYNI 98 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhC--CCCceEEEEE---CCCcc--ccceeCHHHHHHHHHHHHhhchhhh-CcEEE
Confidence 89999999987664 33333221 2566666654 33321 112234444444433333 3333 35999
Q ss_pred EEeCcChHHHHHHHHhCCC--ceeeEEEeccC
Q 021530 99 VAKDFGARPAYLFALLHPE--RVSGVITLGVP 128 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 128 (311)
||+|-||.++-.++.+.|+ .|+.+|.+++|
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999997 59999999865
No 153
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.93 E-value=6.7e-05 Score=58.84 Aligned_cols=93 Identities=25% Similarity=0.301 Sum_probs=68.0
Q ss_pred eEEEECCCCCchhhhH-HHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----hCCCcEEEEEe
Q 021530 27 VVVFLHGFPEIWYSWR-HQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----LGINKVFLVAK 101 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~lvGh 101 (311)
.+||+-|=++.. .++ .+...|.+.|+.||.+|-+=|=-|.+ |-++.+.|+.++++. .+.+++.|+|+
T Consensus 4 ~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 4 LAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 467788765544 333 36677888899999999888877654 444566666666554 57899999999
Q ss_pred CcChHHHHHHHHhCC----CceeeEEEecc
Q 021530 102 DFGARPAYLFALLHP----ERVSGVITLGV 127 (311)
Q Consensus 102 S~Gg~ia~~~a~~~p----~~v~~lvl~~~ 127 (311)
|+|+-|.-...-+.| ++|+.+++++.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEecc
Confidence 999987766555555 47888888863
No 154
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.79 E-value=3.2e-05 Score=64.56 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=51.5
Q ss_pred ceEEEECCCCCchh---hhHHH---HHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC-C-CcEE
Q 021530 26 NVVVFLHGFPEIWY---SWRHQ---MVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-I-NKVF 97 (311)
Q Consensus 26 ~~vvllHG~~~~~~---~w~~~---~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~-~-~~~~ 97 (311)
.|||+.||+++++. .+..+ +.... .|-.|.++++ |-|.++-..+.---.+.+.++.+-+.+..-. + +-++
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~-PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQH-PGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHS-TT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhC-CCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 38999999997642 44433 22222 2667778876 4333210000001234444444444444311 1 4599
Q ss_pred EEEeCcChHHHHHHHHhCCC-ceeeEEEeccC
Q 021530 98 LVAKDFGARPAYLFALLHPE-RVSGVITLGVP 128 (311)
Q Consensus 98 lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 128 (311)
+||+|-||.++-.++.+.|+ .|+.+|.+++|
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 99999999999999999885 69999999865
No 155
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.76 E-value=0.0003 Score=64.03 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=66.6
Q ss_pred eEEEECCCCCchhh-hH--HHHHHHHH-CCcEEEEeCCCCCCCCCCCC-----CCCcCcHHHHHHHHHHHHHHhC--C--
Q 021530 27 VVVFLHGFPEIWYS-WR--HQMVAVAA-AGFRAIAPDYRGYGLSDPPA-----EPEKASFKDITNDLLATLDHLG--I-- 93 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~--~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~-----~~~~~~~~~~a~dl~~~l~~l~--~-- 93 (311)
||+|.-|.=++... |. ..+..+.+ .+--||+...|=||.|.+.. +....|.++..+|+..|++.+. .
T Consensus 30 pifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~ 109 (434)
T PF05577_consen 30 PIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNT 109 (434)
T ss_dssp EEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcC
Confidence 55555555444332 21 12233333 36799999999999997642 2234699999999999988865 1
Q ss_pred ---CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 94 ---NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 94 ---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
.|++++|-|.||.+|.-+-.+||+.|.+-+..++|.
T Consensus 110 ~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 110 APNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp GCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred CCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 379999999999999999999999999999887653
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.75 E-value=0.00015 Score=62.08 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=57.1
Q ss_pred eEEEECCCCCchhh--hHH-HHHHHHHCCcEEEEeCCCCCCCCC-CC--CCCCcCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 021530 27 VVVFLHGFPEIWYS--WRH-QMVAVAAAGFRAIAPDYRGYGLSD-PP--AEPEKASFKDITNDLLATLDHLGINKVFLVA 100 (311)
Q Consensus 27 ~vvllHG~~~~~~~--w~~-~~~~l~~~~~~vi~~Dl~G~G~S~-~~--~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (311)
.+||+||+..+..+ ++. ++.+-.....-.|.+..|--|.-- .. .....|+-.+++.-|..+.+....++++|++
T Consensus 118 vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilA 197 (377)
T COG4782 118 VLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLA 197 (377)
T ss_pred EEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEE
Confidence 79999999876553 321 222222234567778887666420 00 1123567777777777777777889999999
Q ss_pred eCcChHHHHHHH
Q 021530 101 KDFGARPAYLFA 112 (311)
Q Consensus 101 hS~Gg~ia~~~a 112 (311)
||||.++.+...
T Consensus 198 HSMGtwl~~e~L 209 (377)
T COG4782 198 HSMGTWLLMEAL 209 (377)
T ss_pred ecchHHHHHHHH
Confidence 999999987643
No 157
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.73 E-value=0.00043 Score=61.91 Aligned_cols=109 Identities=21% Similarity=0.359 Sum_probs=68.0
Q ss_pred ECCEEEEEEecCCCCceEEEEC-CCCCchhhhHHHHHHHHHCCcEE----E-E-eCCCCCCCCCCCCCCCcCcHHHHHHH
Q 021530 11 VQGLNLHVAETGTGPNVVVFLH-GFPEIWYSWRHQMVAVAAAGFRA----I-A-PDYRGYGLSDPPAEPEKASFKDITND 83 (311)
Q Consensus 11 ~~g~~i~y~~~G~g~~~vvllH-G~~~~~~~w~~~~~~l~~~~~~v----i-~-~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (311)
.+|+.|.+...|+-. .|-.+- .+......|..++..|.+.||.. . + +|.|=- .. ..+++...
T Consensus 37 ~~gv~i~~~~~g~~~-~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~--------~~--~~~~~~~~ 105 (389)
T PF02450_consen 37 DPGVEIRVPGFGGTS-GIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLS--------PA--ERDEYFTK 105 (389)
T ss_pred CCCceeecCCCCcee-eeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhc--------hh--hHHHHHHH
Confidence 366667666555211 232222 22222227888999988766642 1 2 454421 01 33355566
Q ss_pred HHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCC------ceeeEEEeccCCC
Q 021530 84 LLATLDHL---GINKVFLVAKDFGARPAYLFALLHPE------RVSGVITLGVPFI 130 (311)
Q Consensus 84 l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~ 130 (311)
+.++++.. .-+|++||||||||.++..+....+. .|+++|.+++|+.
T Consensus 106 lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 106 LKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 66665554 24789999999999999998887753 5999999998754
No 158
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=0.00038 Score=57.06 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=63.1
Q ss_pred eEEEECCCCCchhh--hHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-----CcEEE
Q 021530 27 VVVFLHGFPEIWYS--WRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-----NKVFL 98 (311)
Q Consensus 27 ~vvllHG~~~~~~~--w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~l 98 (311)
|+|++||+++++.+ ...+.+.+.+. |..|++.|. |-| .+ ...+.-+-+.+..++|+++. +-+.+
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~-----~s~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK-----DSSLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc-----hhhhccHHHHHHHHHHHHhcchhccCceEE
Confidence 79999999988776 55444444433 688888884 655 11 11222223333344444432 34999
Q ss_pred EEeCcChHHHHHHHHhCCC-ceeeEEEeccC
Q 021530 99 VAKDFGARPAYLFALLHPE-RVSGVITLGVP 128 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 128 (311)
+|.|-||.++-.++..-|+ .|+.+|.++.|
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999999987664 69999988765
No 159
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.67 E-value=0.0016 Score=52.95 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=85.1
Q ss_pred cceeEEEECCEEEEEEecC-----CC--CceEEEECCCCCchhhhHHHHHHHHHC---CcEEEEeCCCCCCCCC---C--
Q 021530 4 IEHKYIKVQGLNLHVAETG-----TG--PNVVVFLHGFPEIWYSWRHQMVAVAAA---GFRAIAPDYRGYGLSD---P-- 68 (311)
Q Consensus 4 ~~~~~~~~~g~~i~y~~~G-----~g--~~~vvllHG~~~~~~~w~~~~~~l~~~---~~~vi~~Dl~G~G~S~---~-- 68 (311)
|+.++++.+|..++...+| ++ .+.++++.|.|+....+.+....|... ++++..+...||-.-. +
T Consensus 1 m~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~ 80 (301)
T KOG3975|consen 1 MTEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED 80 (301)
T ss_pred CcceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc
Confidence 3455666677766655554 22 226889999999999888877766542 3557777777776432 1
Q ss_pred --CCCCCcCcHHHHHHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHhC-C-CceeeEEEe
Q 021530 69 --PAEPEKASFKDITNDLLATLDHLGI--NKVFLVAKDFGARPAYLFALLH-P-ERVSGVITL 125 (311)
Q Consensus 69 --~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~-p-~~v~~lvl~ 125 (311)
..+.+-++++++++--.+|++..-. .|++++|||.|+++.+.+.... + -+|.+.+++
T Consensus 81 ~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 81 HSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred cccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 1122458999999988999988643 5799999999999999887732 2 356666655
No 160
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.65 E-value=0.00042 Score=57.68 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=63.9
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCC-------CCCCCCCCCc---CcHHHHHHHHH-HHHHHhCC-
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYG-------LSDPPAEPEK---ASFKDITNDLL-ATLDHLGI- 93 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G-------~S~~~~~~~~---~~~~~~a~dl~-~~l~~l~~- 93 (311)
|-|||+||-+....+=+. .+.. +.--|+++.|-++ .+.--.+.+. .-.....+.+. .+.++-++
T Consensus 192 PLvlfLHgagq~g~dn~~---~l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDK---VLSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred cEEEEEecCCCCCchhhh---hhhc-CccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 479999999876664433 2333 5666777777666 1110001111 12222333333 34555566
Q ss_pred -CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 94 -NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 94 -~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+++.++|.|+||.-++.++.++||.+++.+++++
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 4699999999999999999999999999999874
No 161
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.64 E-value=0.00072 Score=61.50 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=57.1
Q ss_pred eEEEECCCC----Cchhh--hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHH--------HhC
Q 021530 27 VVVFLHGFP----EIWYS--WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD--------HLG 92 (311)
Q Consensus 27 ~vvllHG~~----~~~~~--w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~--------~l~ 92 (311)
.++++||.| .+..+ |...+.... +--.|.++|++-- . ...++..-++-++.|.. ++.
T Consensus 178 l~i~aps~p~ap~tSd~~~~wqs~lsl~g-evvev~tfdl~n~------i--gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 178 LAIKAPSTPLAPKTSDRMWSWQSRLSLKG-EVVEVPTFDLNNP------I--GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred eEEeccCCCCCCccchHHHhHHHHHhhhc-eeeeeccccccCC------C--CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 689999988 23333 332222111 2345557776531 1 12466666666666655 334
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCC-CceeeEEEec
Q 021530 93 INKVFLVAKDFGARPAYLFALLHP-ERVSGVITLG 126 (311)
Q Consensus 93 ~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~ 126 (311)
..+++|+|.|||+.++.+.+.... ..|+.+|+++
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 468999999999998888887654 3588888876
No 162
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.59 E-value=8e-05 Score=53.20 Aligned_cols=60 Identities=18% Similarity=0.275 Sum_probs=49.9
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
..|+|++.++.|+++|.+.. ..+.+.+++++++.+++.||......-.-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a------~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGA------RAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHH------HHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 58999999999999976543 3567788999999999999999875556778889899864
No 163
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.56 E-value=0.00045 Score=64.61 Aligned_cols=99 Identities=23% Similarity=0.244 Sum_probs=56.6
Q ss_pred CCceEEEECCCCCchhhhHHHHHHHH----------------HCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 021530 24 GPNVVVFLHGFPEIWYSWRHQMVAVA----------------AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLAT 87 (311)
Q Consensus 24 g~~~vvllHG~~~~~~~w~~~~~~l~----------------~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~ 87 (311)
|- ||+|+.|..+|...=+..+.... ...|+..+.|+=+ .....+..++.++++-+.+.
T Consensus 89 GI-PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 89 GI-PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred Cc-eEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHH
Confidence 44 89999999888764443332211 0134555555433 11112334666665555444
Q ss_pred HHH---h--C--------CCcEEEEEeCcChHHHHHHHHh---CCCceeeEEEeccC
Q 021530 88 LDH---L--G--------INKVFLVAKDFGARPAYLFALL---HPERVSGVITLGVP 128 (311)
Q Consensus 88 l~~---l--~--------~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~ 128 (311)
++. + + .+.+.+|||||||.||.+.+.. .++.|.-++..++|
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 332 1 2 1239999999999999776552 24556666666654
No 164
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.53 E-value=0.00022 Score=55.02 Aligned_cols=52 Identities=25% Similarity=0.271 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCC----ceeeEEEeccC
Q 021530 77 FKDITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLHPE----RVSGVITLGVP 128 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 128 (311)
+..+.+.+...+++. .-.+++++|||+||.+|..++...+. ++..++..++|
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 334555555555554 56789999999999999999988754 56677777654
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.49 E-value=0.00027 Score=65.50 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=62.2
Q ss_pred ceEEEECCCC---CchhhhHHHHHHHHHC-C-cEEEEeCCC----CCCCCCCCCCCCcCcHHHHH---HHHHHHHHHhCC
Q 021530 26 NVVVFLHGFP---EIWYSWRHQMVAVAAA-G-FRAIAPDYR----GYGLSDPPAEPEKASFKDIT---NDLLATLDHLGI 93 (311)
Q Consensus 26 ~~vvllHG~~---~~~~~w~~~~~~l~~~-~-~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~a---~dl~~~l~~l~~ 93 (311)
|+||++||.+ ++...+. ...+... + +-||.++.| ||+.+........+.+.+.. +.+.+-+++.|.
T Consensus 96 pv~v~ihGG~~~~g~~~~~~--~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fgg 173 (493)
T cd00312 96 PVMVWIHGGGFMFGSGSLYP--GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGG 173 (493)
T ss_pred CEEEEEcCCccccCCCCCCC--hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 4899999963 2222222 1233332 3 899999998 55544322222334455543 334444555554
Q ss_pred --CcEEEEEeCcChHHHHHHHHh--CCCceeeEEEeccC
Q 021530 94 --NKVFLVAKDFGARPAYLFALL--HPERVSGVITLGVP 128 (311)
Q Consensus 94 --~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 128 (311)
++++|+|+|-||..+..++.. .+..+++.|+.+..
T Consensus 174 d~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 174 DPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred CcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 589999999999998887775 24568888877643
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.45 E-value=0.00057 Score=58.86 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=39.8
Q ss_pred CcHHHH-HHHHHHHHHH-hCC----CcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 75 ASFKDI-TNDLLATLDH-LGI----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 75 ~~~~~~-a~dl~~~l~~-l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
|.++++ .+.+-..+++ ... ++-.++||||||.=|+.+|++|||++..+...++
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg 185 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSG 185 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccc
Confidence 666664 4455544443 332 2689999999999999999999999999987664
No 167
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.44 E-value=0.0044 Score=54.39 Aligned_cols=59 Identities=20% Similarity=0.288 Sum_probs=44.5
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCC-CeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
++++|.++|.|..|.++.++...-|. +.+| .-.+..+||++|..-. ..+.+.|..|+..
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~------d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYY------DKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHH------hhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 57999999999999999887654332 2344 4788899999998877 5556667777653
No 168
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.43 E-value=0.0012 Score=59.81 Aligned_cols=121 Identities=15% Similarity=0.130 Sum_probs=79.7
Q ss_pred eeEEEEC---CEEEEEEecC-----CCCceEEEECCCCCchhhhHHHHH-------------------HHHHCCcEEEEe
Q 021530 6 HKYIKVQ---GLNLHVAETG-----TGPNVVVFLHGFPEIWYSWRHQMV-------------------AVAAAGFRAIAP 58 (311)
Q Consensus 6 ~~~~~~~---g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w~~~~~-------------------~l~~~~~~vi~~ 58 (311)
..+++++ +.+|+|.-.. ...|.||++.|.|+++..|....+ ... +..+++.+
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~i 91 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFI 91 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEE
Confidence 3467776 6688887543 122489999999999998743221 011 24689999
Q ss_pred C-CCCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHh----C------CCce
Q 021530 59 D-YRGYGLSDPPAEP-EKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PERV 119 (311)
Q Consensus 59 D-l~G~G~S~~~~~~-~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v 119 (311)
| +.|-|.|...... ...+.++.|+|+.++|+.. .-.+++|.|-|+||..+-.+|.. . +=.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 9 5599999765432 2348888999999988875 33589999999999987666552 2 2347
Q ss_pred eeEEEecc
Q 021530 120 SGVITLGV 127 (311)
Q Consensus 120 ~~lvl~~~ 127 (311)
+++++.++
T Consensus 172 kGi~IGng 179 (415)
T PF00450_consen 172 KGIAIGNG 179 (415)
T ss_dssp EEEEEESE
T ss_pred ccceecCc
Confidence 88887653
No 169
>COG3150 Predicted esterase [General function prediction only]
Probab=97.43 E-value=0.0013 Score=50.09 Aligned_cols=85 Identities=21% Similarity=0.325 Sum_probs=63.3
Q ss_pred EEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHH
Q 021530 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARP 107 (311)
Q Consensus 28 vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~i 107 (311)
||.||||.+|..+...++ +. ..+..|-|-.+.|.+.. .....+.++.+.+++..++-+...|+|-|+||..
T Consensus 2 ilYlHGFnSSP~shka~l--~~----q~~~~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LL----QFIDEDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHH--HH----HHHhccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 789999988877776543 11 12345556677775433 2467788889999999999878999999999999
Q ss_pred HHHHHHhCCCceeeEE
Q 021530 108 AYLFALLHPERVSGVI 123 (311)
Q Consensus 108 a~~~a~~~p~~v~~lv 123 (311)
|..++.++. +++++
T Consensus 73 At~l~~~~G--irav~ 86 (191)
T COG3150 73 ATWLGFLCG--IRAVV 86 (191)
T ss_pred HHHHHHHhC--Chhhh
Confidence 999999984 34444
No 170
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.41 E-value=0.0005 Score=49.56 Aligned_cols=40 Identities=23% Similarity=0.531 Sum_probs=25.0
Q ss_pred ceeEEEECCEEEEEEec-CCCC--ceEEEECCCCCchhhhHHH
Q 021530 5 EHKYIKVQGLNLHVAET-GTGP--NVVVFLHGFPEIWYSWRHQ 44 (311)
Q Consensus 5 ~~~~~~~~g~~i~y~~~-G~g~--~~vvllHG~~~~~~~w~~~ 44 (311)
..-+.+++|.+||+... ++++ .||||+||||+|...|..+
T Consensus 69 phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 69 PHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp -EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred CCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 34456779999998754 3222 2899999999999988765
No 171
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.40 E-value=0.012 Score=50.85 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=64.6
Q ss_pred eEEEECCCCCchhhhHH----HHHHHHHCCcEEEEeCCCC--CCCCCC--------------C-CCC-Cc---------C
Q 021530 27 VVVFLHGFPEIWYSWRH----QMVAVAAAGFRAIAPDYRG--YGLSDP--------------P-AEP-EK---------A 75 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~----~~~~l~~~~~~vi~~Dl~G--~G~S~~--------------~-~~~-~~---------~ 75 (311)
.||+|||++.+.. |.. +-..|.+.|+..+.+.+|. -..+.. . ... .. -
T Consensus 89 ~vIilp~~g~~~d-~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 89 AVIILPDWGEHPD-WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred EEEEecCCCCCCC-cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 7999999977653 433 3345667799999998888 111000 0 000 00 0
Q ss_pred cHHHHHHH-------HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC-ceeeEEEecc
Q 021530 76 SFKDITND-------LLATLDHLGINKVFLVAKDFGARPAYLFALLHPE-RVSGVITLGV 127 (311)
Q Consensus 76 ~~~~~a~d-------l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~ 127 (311)
....+.+. ..+++...+.++++||||+.|+..+..|....+. .+.+||++++
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 12223333 3334444566779999999999999999888764 5899999974
No 172
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.25 E-value=0.00052 Score=51.89 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 021530 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
++..+.+.+++++.+-.++++.|||+||.+|..+++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 34566777777777767899999999999999988853
No 173
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.24 E-value=0.0015 Score=59.83 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=78.6
Q ss_pred EEEE-CCEEEEEEec---CCCC-ceEEEECCCCCchh---hhH--HHHH---HHHHCCcEEEEeCCCCCCCCCCCCCCCc
Q 021530 8 YIKV-QGLNLHVAET---GTGP-NVVVFLHGFPEIWY---SWR--HQMV---AVAAAGFRAIAPDYRGYGLSDPPAEPEK 74 (311)
Q Consensus 8 ~~~~-~g~~i~y~~~---G~g~-~~vvllHG~~~~~~---~w~--~~~~---~l~~~~~~vi~~Dl~G~G~S~~~~~~~~ 74 (311)
.+.. ||++|+..++ +.|+ |+++..+=+|.... .+. ...+ .+...||-||..|.||.|.|+..... .
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~ 101 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-E 101 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-e
Confidence 3444 9999986654 2232 26777773443333 121 1122 35567999999999999999865432 2
Q ss_pred CcHHHH--HHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHhCCCceeeEEEec
Q 021530 75 ASFKDI--TNDLLATLDHLGI--NKVFLVAKDFGARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 75 ~~~~~~--a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 126 (311)
++ .+. +-|+++.+-++-. .+|-.+|-|++|...+.+|+..|--++.++...
T Consensus 102 ~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~ 156 (563)
T COG2936 102 SS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTE 156 (563)
T ss_pred cc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccc
Confidence 23 222 3477777777655 479999999999999999999887788887654
No 174
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.23 E-value=0.0005 Score=57.67 Aligned_cols=40 Identities=28% Similarity=0.329 Sum_probs=35.5
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGL 65 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~ 65 (311)
|.|||-||++++.+.+......|...||-|.+++.|.+-.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcc
Confidence 4799999999999999888888888899999999987644
No 175
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.11 E-value=0.03 Score=46.56 Aligned_cols=64 Identities=13% Similarity=0.264 Sum_probs=50.1
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCcccc-ChhHHHHHHHHHH
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ-SPEEVNQLVLTFL 307 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~Fl 307 (311)
..++|-|++..+.|.+++.+.++.+... .++.--..+.+.++++.|.-|+. +|++-.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~--~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEE--ARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHH--HHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4579999999999999998877766532 22222248889999999988765 8999999999885
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.10 E-value=0.0033 Score=54.87 Aligned_cols=99 Identities=19% Similarity=0.182 Sum_probs=72.2
Q ss_pred eEEEECCCCCchhhhH-------HHHHHHHHCCcEEEEeCCCCCCCCCCCCCC--------CcCcHHHHHHHHHHHHHHh
Q 021530 27 VVVFLHGFPEIWYSWR-------HQMVAVAAAGFRAIAPDYRGYGLSDPPAEP--------EKASFKDITNDLLATLDHL 91 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~-------~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--------~~~~~~~~a~dl~~~l~~l 91 (311)
||+|--|-=++-..|. .+++.+ +--+|..+.|=||+|-+-.+. ...|.++--+|.++++..|
T Consensus 82 PIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 82 PIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred ceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 7999999755544332 144433 568999999999999764321 1235556556677777666
Q ss_pred CC------CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 92 GI------NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 92 ~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
+- .+|+.+|-|.||++|.-+-.+||+.|.+-+..++|
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 43 47999999999999999999999999988776665
No 177
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.00 E-value=0.00084 Score=53.12 Aligned_cols=102 Identities=20% Similarity=0.265 Sum_probs=65.6
Q ss_pred ceEEEECCCCCchhhhHHHH---HHHHHCCcEEEEeCC--CCCC---CCCCC---------------CCCCcCcHHHH-H
Q 021530 26 NVVVFLHGFPEIWYSWRHQM---VAVAAAGFRAIAPDY--RGYG---LSDPP---------------AEPEKASFKDI-T 81 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~---~~l~~~~~~vi~~Dl--~G~G---~S~~~---------------~~~~~~~~~~~-a 81 (311)
|+|.+|.|+.++...|-... ....+.++-||+||- ||.- .++.- +....|.+-+| .
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 47899999988877654211 122456889999985 4431 11110 01113444443 4
Q ss_pred HHHHHHHHH----hCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 82 NDLLATLDH----LGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 82 ~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+.+-+++.. +...++.+.||||||.=|+..+++.|++.+++-..++
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 555555552 3345799999999999999999999998888765543
No 178
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.96 E-value=0.0066 Score=54.97 Aligned_cols=122 Identities=13% Similarity=0.059 Sum_probs=73.2
Q ss_pred eeEEEEC---CEEEEEEecC-----CCCceEEEECCCCCchhhhHH---HHHHHH-------------------HCCcEE
Q 021530 6 HKYIKVQ---GLNLHVAETG-----TGPNVVVFLHGFPEIWYSWRH---QMVAVA-------------------AAGFRA 55 (311)
Q Consensus 6 ~~~~~~~---g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w~~---~~~~l~-------------------~~~~~v 55 (311)
..+++++ +..++|.-.. ...|.|+++-|.|+++..+.. .-|... .+..++
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 118 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANI 118 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcE
Confidence 3467773 4567776433 122489999999998874421 111100 123789
Q ss_pred EEeC-CCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHh----C------CC
Q 021530 56 IAPD-YRGYGLSDPPAEPEKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PE 117 (311)
Q Consensus 56 i~~D-l~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p~ 117 (311)
+.+| +.|.|.|.........+-.+.|+++.++++.. .-.+++|.|.|.||..+-.+|.. . +=
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~i 198 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPI 198 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcc
Confidence 9999 88999996443211112123345666555552 33579999999999876666553 1 12
Q ss_pred ceeeEEEecc
Q 021530 118 RVSGVITLGV 127 (311)
Q Consensus 118 ~v~~lvl~~~ 127 (311)
.++++++.++
T Consensus 199 nLkGi~iGNg 208 (433)
T PLN03016 199 NLQGYMLGNP 208 (433)
T ss_pred cceeeEecCC
Confidence 4677776553
No 179
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.91 E-value=0.0015 Score=56.93 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=53.3
Q ss_pred ceEEEECCCCC-chhhhHHHHHHHHHCCcEEEEeCCCCCCCCC-CCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 021530 26 NVVVFLHGFPE-IWYSWRHQMVAVAAAGFRAIAPDYRGYGLSD-PPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (311)
Q Consensus 26 ~~vvllHG~~~-~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (311)
+-|||.||+-+ +...|...+...... +.=.....+|+=... ....+..+-=...++++.+.+....++++.++|||+
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeec
Confidence 47999999866 677888877665543 322233334443322 222222222223566777777777889999999999
Q ss_pred ChHHHHH
Q 021530 104 GARPAYL 110 (311)
Q Consensus 104 Gg~ia~~ 110 (311)
||.++..
T Consensus 160 GGLvar~ 166 (405)
T KOG4372|consen 160 GGLVARY 166 (405)
T ss_pred CCeeeeE
Confidence 9998754
No 180
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.88 E-value=0.0057 Score=48.93 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=64.8
Q ss_pred eEEEECCCCCchh---hhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC----CcEEEE
Q 021530 27 VVVFLHGFPEIWY---SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI----NKVFLV 99 (311)
Q Consensus 27 ~vvllHG~~~~~~---~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lv 99 (311)
-||||-|+++..- .-..+..+|.+.++.+|-+-++-+= ..-...|+++-++|+..++++++. .+++|+
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy-----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY-----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc-----cccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 6899999875433 2334556777778999988776321 111234677779999999998765 379999
Q ss_pred EeCcChHHHHHHHH--hCCCceeeEEEec
Q 021530 100 AKDFGARPAYLFAL--LHPERVSGVITLG 126 (311)
Q Consensus 100 GhS~Gg~ia~~~a~--~~p~~v~~lvl~~ 126 (311)
|||-|+.=.+.|.. .-|..+++-|+.+
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqA 141 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQA 141 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhC
Confidence 99999998888762 2344455555443
No 181
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.80 E-value=0.016 Score=47.65 Aligned_cols=56 Identities=14% Similarity=0.346 Sum_probs=45.0
Q ss_pred eEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCC-ccccChhHHHHHHHHHHhh
Q 021530 247 ALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHF-VQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 247 ~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~Fl~~ 309 (311)
+.++.+.+|.+++-.++. .+.+..|++++..++ +||. .++-+-++|.++|.+-|+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~------~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVR------SLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcH------HHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 567889999999766654 356678999999998 7995 4777889999999888753
No 182
>PLN02209 serine carboxypeptidase
Probab=96.79 E-value=0.016 Score=52.54 Aligned_cols=121 Identities=14% Similarity=0.107 Sum_probs=74.6
Q ss_pred eEEEEC---CEEEEEEecC-----CCCceEEEECCCCCchhhhHHHH---HHHH-------------------HCCcEEE
Q 021530 7 KYIKVQ---GLNLHVAETG-----TGPNVVVFLHGFPEIWYSWRHQM---VAVA-------------------AAGFRAI 56 (311)
Q Consensus 7 ~~~~~~---g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w~~~~---~~l~-------------------~~~~~vi 56 (311)
.+++++ +..++|.-.. ...|.|+++-|.|+++..+.... |... .+..+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 466663 4567776433 12248999999999988763221 1100 0236899
Q ss_pred EeC-CCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHh----C------CCc
Q 021530 57 APD-YRGYGLSDPPAEPEKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H------PER 118 (311)
Q Consensus 57 ~~D-l~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~ 118 (311)
.+| +.|.|.|.........+-++.++|+.++++.. .-.+++|.|.|.||..+-.+|.. . +=.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 999 88999996433212223334567777776663 22479999999999876666542 1 114
Q ss_pred eeeEEEecc
Q 021530 119 VSGVITLGV 127 (311)
Q Consensus 119 v~~lvl~~~ 127 (311)
++++++.++
T Consensus 202 l~Gi~igng 210 (437)
T PLN02209 202 LQGYVLGNP 210 (437)
T ss_pred eeeEEecCc
Confidence 667776553
No 183
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.67 E-value=0.031 Score=44.55 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=63.4
Q ss_pred eEEEECCCCC-chhhhHHH---------------HHHHHHCCcEEEEeCCCC---CCCCCCCCCCCcCcHHHHHHHHH-H
Q 021530 27 VVVFLHGFPE-IWYSWRHQ---------------MVAVAAAGFRAIAPDYRG---YGLSDPPAEPEKASFKDITNDLL-A 86 (311)
Q Consensus 27 ~vvllHG~~~-~~~~w~~~---------------~~~l~~~~~~vi~~Dl~G---~G~S~~~~~~~~~~~~~~a~dl~-~ 86 (311)
.+|||||-+. -+..|..- +....+.||.||....-- +-.+...+...-.|--+.+.-+. .
T Consensus 103 LlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~ 182 (297)
T KOG3967|consen 103 LLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKN 182 (297)
T ss_pred eEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHH
Confidence 6999999764 23345432 223345689999876431 22222211111123334444333 4
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCC--ceeeEEEeccC
Q 021530 87 TLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLGVP 128 (311)
Q Consensus 87 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 128 (311)
++.-...+.+.+|.||.||...+.+..++|+ +|.++.+.+.+
T Consensus 183 ~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 183 IVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 5555667889999999999999999999884 77777777754
No 184
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.66 E-value=0.0026 Score=56.52 Aligned_cols=87 Identities=17% Similarity=0.364 Sum_probs=60.0
Q ss_pred hhhHHHHHHHHHCCcE------EEEeCCCC-CCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHH
Q 021530 39 YSWRHQMVAVAAAGFR------AIAPDYRG-YGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLF 111 (311)
Q Consensus 39 ~~w~~~~~~l~~~~~~------vi~~Dl~G-~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 111 (311)
..|..+++.+..=||. -..||.|= +-.| +..+..+.++..-|+......|-+|++||+|||||.+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~----e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNS----EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCCh----hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 3788888887765554 23566552 2111 22234566666666666666677999999999999999999
Q ss_pred HHhCCC--------ceeeEEEeccCC
Q 021530 112 ALLHPE--------RVSGVITLGVPF 129 (311)
Q Consensus 112 a~~~p~--------~v~~lvl~~~~~ 129 (311)
...+++ .+++++.+++|.
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchh
Confidence 998887 367777776654
No 185
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.65 E-value=0.0053 Score=39.23 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=21.9
Q ss_pred ceeEEEE-CCEEEEEEec-C-C-------CCceEEEECCCCCchhhh
Q 021530 5 EHKYIKV-QGLNLHVAET-G-T-------GPNVVVFLHGFPEIWYSW 41 (311)
Q Consensus 5 ~~~~~~~-~g~~i~y~~~-G-~-------g~~~vvllHG~~~~~~~w 41 (311)
+...+++ ||+-+..... . . ..+||+|.||+.+++..|
T Consensus 13 E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 13 EEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 4566777 9997775432 2 2 124899999999999999
No 186
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.64 E-value=0.0067 Score=55.87 Aligned_cols=88 Identities=17% Similarity=0.279 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh----CCCcEEEEEeCcChHHHHHHHHhC
Q 021530 40 SWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHL----GINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 40 ~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
.|..++..|.+.||. --|+.|..+==+.........+++-..+.++++.. +-+|++|+||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 678889998887775 34444433210000000112234444555555533 357999999999999999875521
Q ss_pred -----------C----CceeeEEEeccCC
Q 021530 116 -----------P----ERVSGVITLGVPF 129 (311)
Q Consensus 116 -----------p----~~v~~lvl~~~~~ 129 (311)
+ +.|+++|.+++|+
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred cccccccCCcchHHHHHHHHHheeccccc
Confidence 1 2478889888764
No 187
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.64 E-value=0.034 Score=45.67 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC----CCceeeEEEeccC
Q 021530 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLH----PERVSGVITLGVP 128 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~ 128 (311)
.-++-+.++++..+- ++.+.|||.||.+|+..|+.. .+||.++...++|
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 334445555555543 599999999999999988874 3578888877765
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.60 E-value=0.0065 Score=47.70 Aligned_cols=54 Identities=24% Similarity=0.218 Sum_probs=43.8
Q ss_pred cHHHHHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 76 SFKDITNDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
--+.-+.+|.+|++.|.- .+.+++|||+|+.++-..+...+..+..+++++.|-
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 345678888888888753 368999999999999887777678999999998763
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.55 E-value=0.0046 Score=51.06 Aligned_cols=24 Identities=25% Similarity=0.239 Sum_probs=20.3
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhC
Q 021530 92 GINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
.-.++.+.|||+||.+|..+|+..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 346799999999999999988853
No 190
>PLN02162 triacylglycerol lipase
Probab=96.46 E-value=0.0071 Score=54.17 Aligned_cols=54 Identities=26% Similarity=0.394 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh---C-----CCceeeEEEeccCC
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL---H-----PERVSGVITLGVPF 129 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~~ 129 (311)
.+.+.-+.+.+++++..-.++++.|||+||.+|..+|+. + .+++.++...+.|.
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 344556667777777666689999999999999987652 2 22345666667653
No 191
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.36 E-value=0.035 Score=48.73 Aligned_cols=100 Identities=16% Similarity=0.218 Sum_probs=62.0
Q ss_pred CceEEEECCCCCchhhhHHHHHHH------HHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEE
Q 021530 25 PNVVVFLHGFPEIWYSWRHQMVAV------AAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFL 98 (311)
Q Consensus 25 ~~~vvllHG~~~~~~~w~~~~~~l------~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~l 98 (311)
+|.||.+||+|-.......++..+ .+ ...+++.|.--.. |........+-+.+.++-...+++..|-++++|
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~-~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~L 199 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS-SDEHGHKYPTQLRQLVATYDYLVESEGNKNIIL 199 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc-cccCCCcCchHHHHHHHHHHHHHhccCCCeEEE
Confidence 348999999875544444344332 33 4577777765432 000011123455666666677787778899999
Q ss_pred EEeCcChHHHHHHHHh--CCCc---eeeEEEec
Q 021530 99 VAKDFGARPAYLFALL--HPER---VSGVITLG 126 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~--~p~~---v~~lvl~~ 126 (311)
+|-|-||.+++.+... .+++ =+++|+++
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLIS 232 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILIS 232 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEEC
Confidence 9999999999887653 2111 24667765
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.28 E-value=0.045 Score=49.24 Aligned_cols=78 Identities=19% Similarity=0.220 Sum_probs=64.8
Q ss_pred CCcEEEEeCCCCCCCCCCCCCC-----CcCcHHHHHHHHHHHHHHhCCC-------cEEEEEeCcChHHHHHHHHhCCCc
Q 021530 51 AGFRAIAPDYRGYGLSDPPAEP-----EKASFKDITNDLLATLDHLGIN-------KVFLVAKDFGARPAYLFALLHPER 118 (311)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~-----~~~~~~~~a~dl~~~l~~l~~~-------~~~lvGhS~Gg~ia~~~a~~~p~~ 118 (311)
-+-.|+..+.|=||.|.+..+. ...|..+.-.|+++|+++++.+ |.+.+|-|+-|.++.-+-.+|||.
T Consensus 117 fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel 196 (514)
T KOG2182|consen 117 FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL 196 (514)
T ss_pred hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh
Confidence 3789999999999998654322 2357788888999999998652 799999999999999999999999
Q ss_pred eeeEEEeccC
Q 021530 119 VSGVITLGVP 128 (311)
Q Consensus 119 v~~lvl~~~~ 128 (311)
+.+-|..++|
T Consensus 197 ~~GsvASSap 206 (514)
T KOG2182|consen 197 TVGSVASSAP 206 (514)
T ss_pred heeecccccc
Confidence 9998877665
No 193
>PLN00413 triacylglycerol lipase
Probab=96.15 E-value=0.014 Score=52.37 Aligned_cols=53 Identities=32% Similarity=0.489 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh---C-----CCceeeEEEeccCC
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL---H-----PERVSGVITLGVPF 129 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~~ 129 (311)
+.++.+.+.+++++..-.++++.|||+||.+|..+|+. + .+++.++...+.|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 34566777888887776789999999999999988752 1 23455666666653
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.00 E-value=0.014 Score=48.38 Aligned_cols=46 Identities=9% Similarity=0.130 Sum_probs=36.6
Q ss_pred HHHHHHHH-h--CCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccC
Q 021530 83 DLLATLDH-L--GINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 83 dl~~~l~~-l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
.+.-++++ . +-++-.++|||+||.+++..-+++|+.+....++++.
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 33345555 2 3356899999999999999999999999999988754
No 195
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.98 E-value=0.01 Score=54.28 Aligned_cols=66 Identities=14% Similarity=0.296 Sum_probs=49.4
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcc---------------c---------ccccCC-----CeEEEEeCCCCCCcccc
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSG---------------K---------VKDFVP-----NLEIIRLSEGSHFVQEQ 294 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~---------------~---------l~~~~~-----~~~~~~i~~~gH~~~~e 294 (311)
.++||+..|+.|.+++..+...+..+- + ..+... +.+++.+.++||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 489999999999998665443332100 0 111223 68889999999999999
Q ss_pred ChhHHHHHHHHHHhh
Q 021530 295 SPEEVNQLVLTFLNK 309 (311)
Q Consensus 295 ~p~~~~~~i~~Fl~~ 309 (311)
+|++..+.|..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999964
No 196
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.78 E-value=0.022 Score=49.60 Aligned_cols=39 Identities=36% Similarity=0.501 Sum_probs=30.4
Q ss_pred hCCCcEEEEEeCcChHHHHHHHHhCCC-----ceeeEEEeccCC
Q 021530 91 LGINKVFLVAKDFGARPAYLFALLHPE-----RVSGVITLGVPF 129 (311)
Q Consensus 91 l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~ 129 (311)
+|-++++|||||+|+.+.+.+...-++ .|..++++++|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 366789999999999998876654443 388899998763
No 197
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.67 E-value=0.046 Score=49.38 Aligned_cols=89 Identities=19% Similarity=0.202 Sum_probs=60.9
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHH-------------------CCcEEEEeC-CCCCCCCCCCCCCCcCcHHHHHHHHH
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAA-------------------AGFRAIAPD-YRGYGLSDPPAEPEKASFKDITNDLL 85 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~-------------------~~~~vi~~D-l~G~G~S~~~~~~~~~~~~~~a~dl~ 85 (311)
|.++++-|.|+++..|..+.+ +-. ..-.+|.+| .-|-|.|....+...-++....+|+.
T Consensus 102 Pvi~wlNGGPGcSS~~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 102 PVIFWLNGGPGCSSVTGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred ceEEEecCCCChHhhhhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 379999999999998864421 100 124789999 88999998532223345555666655
Q ss_pred HHHHH-------hC--CCcEEEEEeCcChHHHHHHHHhC
Q 021530 86 ATLDH-------LG--INKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 86 ~~l~~-------l~--~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
.+.+. .. ..+.+|+|-|+||.-+-.+|..-
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 54433 22 25899999999999988887753
No 198
>PLN02571 triacylglycerol lipase
Probab=95.55 E-value=0.019 Score=50.97 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHh
Q 021530 78 KDITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 78 ~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+++.+++.++++...-+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44566777777765433 58999999999999998875
No 199
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.48 E-value=0.029 Score=49.39 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=79.2
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCC-cCcHHHHHHHHHHHHHHhCC---CcEEEEEeC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPE-KASFKDITNDLLATLDHLGI---NKVFLVAKD 102 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~a~dl~~~l~~l~~---~~~~lvGhS 102 (311)
+|+.--|...+..-...-...|++ -+-|.+..|=||.|.+.+... ..|+++-|+|..++.++++- +|.+=-|-|
T Consensus 65 tV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~S 142 (448)
T PF05576_consen 65 TVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGS 142 (448)
T ss_pred eEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcC
Confidence 777777877665544433334543 588999999999998765443 46999999999999998852 678888999
Q ss_pred cChHHHHHHHHhCCCceeeEEEeccC
Q 021530 103 FGARPAYLFALLHPERVSGVITLGVP 128 (311)
Q Consensus 103 ~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (311)
-||+.++.+=..||+-|++.|.-.+|
T Consensus 143 KGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 143 KGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred CCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999999999999999999976655
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.43 E-value=0.13 Score=45.53 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=28.0
Q ss_pred cEEEEEeCcChHHHHHHHHhCCCceeeEEE
Q 021530 95 KVFLVAKDFGARPAYLFALLHPERVSGVIT 124 (311)
Q Consensus 95 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 124 (311)
++.++|+|.||.+|...|.-.|..+++++=
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iD 214 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVID 214 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEe
Confidence 789999999999999999999999999873
No 201
>PLN02454 triacylglycerol lipase
Probab=95.43 E-value=0.023 Score=50.44 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCc--EEEEEeCcChHHHHHHHHh
Q 021530 83 DLLATLDHLGINK--VFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 83 dl~~~l~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 114 (311)
.|.++++...-.+ +++.|||+||.+|+..|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444433334 8999999999999998864
No 202
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.40 E-value=0.067 Score=46.60 Aligned_cols=65 Identities=18% Similarity=0.312 Sum_probs=47.5
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcc------------------cccccCCC-eEEEEeCCCCCCccccChhHHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSG------------------KVKDFVPN-LEIIRLSEGSHFVQEQSPEEVNQLVL 304 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~------------------~l~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 304 (311)
.++||+..|..|.+++..+.+.+..+- -..+...+ .++..+.++||+++ .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 479999999999988665544333210 01112233 88899999999997 59999999999
Q ss_pred HHHhh
Q 021530 305 TFLNK 309 (311)
Q Consensus 305 ~Fl~~ 309 (311)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 203
>PLN02934 triacylglycerol lipase
Probab=95.36 E-value=0.052 Score=49.33 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
.+.+..+.+.+++++..-.++++.|||+||.+|..+|+
T Consensus 303 Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34456677778888777678999999999999999875
No 204
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.34 E-value=0.11 Score=45.73 Aligned_cols=75 Identities=23% Similarity=0.237 Sum_probs=55.3
Q ss_pred EEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----hCCCcEEEEEeCc
Q 021530 28 VVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDH----LGINKVFLVAKDF 103 (311)
Q Consensus 28 vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~lvGhS~ 103 (311)
-||..|=++....=+.+...|.+.|+.||-+|=.-|-=|.+ |-++.++|+.++++. .|.+++.|+|+|+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 46666655544333346677878899999999877765543 666888888888776 4678999999999
Q ss_pred ChHHHH
Q 021530 104 GARPAY 109 (311)
Q Consensus 104 Gg~ia~ 109 (311)
|+=|--
T Consensus 336 GADvlP 341 (456)
T COG3946 336 GADVLP 341 (456)
T ss_pred cchhhH
Confidence 998743
No 205
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.31 E-value=0.05 Score=50.87 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=59.3
Q ss_pred ceEEEECCCC---Cch--hhhHHHHHHHHHCCcEEEEeCCC----CCCCCCCCCCC-CcCcHHHHHH---HHHHHHHHhC
Q 021530 26 NVVVFLHGFP---EIW--YSWRHQMVAVAAAGFRAIAPDYR----GYGLSDPPAEP-EKASFKDITN---DLLATLDHLG 92 (311)
Q Consensus 26 ~~vvllHG~~---~~~--~~w~~~~~~l~~~~~~vi~~Dl~----G~G~S~~~~~~-~~~~~~~~a~---dl~~~l~~l~ 92 (311)
|++|+|||.+ ++. ..+.. ...+..++.=||.+..| ||-.+...... ..+.+.++.. .+.+-+.+.|
T Consensus 126 PV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 126 PVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred ceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 4899999963 333 33432 22334557888888877 44434322222 4566666543 4445555565
Q ss_pred --CCcEEEEEeCcChHHHHHHHHh--CCCceeeEEEecc
Q 021530 93 --INKVFLVAKDFGARPAYLFALL--HPERVSGVITLGV 127 (311)
Q Consensus 93 --~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~ 127 (311)
.++|+|+|||-||..+..+... ....+++.|+.++
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 3679999999999988766654 2357999998875
No 206
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.02 E-value=0.1 Score=43.00 Aligned_cols=83 Identities=19% Similarity=0.314 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHCCcEEEEeCC-CCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC----cEEEEEeCcChHHHHHHHHh
Q 021530 40 SWRHQMVAVAAAGFRAIAPDY-RGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN----KVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 40 ~w~~~~~~l~~~~~~vi~~Dl-~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~ 114 (311)
.|+.+++.|.++||.||+.=. .|+-.-.. ..--+..+-..+.++.+.-++. ++.-||||+|+.+-+.+...
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy~~tfDH~~~----A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~ 110 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPYVVTFDHQAI----AREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSL 110 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEecCCCCcHHHH----HHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhh
Confidence 466688899989999998654 22211000 0001111222222222222222 56789999999999988888
Q ss_pred CCCceeeEEEec
Q 021530 115 HPERVSGVITLG 126 (311)
Q Consensus 115 ~p~~v~~lvl~~ 126 (311)
++..-++-++++
T Consensus 111 ~~~~r~gniliS 122 (250)
T PF07082_consen 111 FDVERAGNILIS 122 (250)
T ss_pred ccCcccceEEEe
Confidence 775557777775
No 207
>PLN02408 phospholipase A1
Probab=94.99 E-value=0.039 Score=48.34 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHh
Q 021530 80 ITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 80 ~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 114 (311)
..+.+.+++++..-+ ++++.|||+||.+|...|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566667665533 48999999999999988775
No 208
>PLN02310 triacylglycerol lipase
Probab=94.97 E-value=0.062 Score=47.71 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhC----CCcEEEEEeCcChHHHHHHHHh----CCCceeeEEEeccCC
Q 021530 79 DITNDLLATLDHLG----INKVFLVAKDFGARPAYLFALL----HPERVSGVITLGVPF 129 (311)
Q Consensus 79 ~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~ 129 (311)
+..+.+.++++... -.++++.|||+||.+|...|.. .|..--.++..++|.
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 34555666666542 1369999999999999988753 344322344556553
No 209
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.80 E-value=0.058 Score=42.66 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHH----HhCCCcEEEEEeCcChHHHHHHHHh------CCCceeeEEEeccC
Q 021530 76 SFKDITNDLLATLD----HLGINKVFLVAKDFGARPAYLFALL------HPERVSGVITLGVP 128 (311)
Q Consensus 76 ~~~~~a~dl~~~l~----~l~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~ 128 (311)
+...-++++.+.++ ..--.|++|+|+|.|+.|+..++.. ..++|.++++++-|
T Consensus 59 S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 44444555555544 3344689999999999999988776 33689999998855
No 210
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.68 E-value=0.15 Score=41.37 Aligned_cols=75 Identities=23% Similarity=0.383 Sum_probs=48.7
Q ss_pred ceEEEECCCCCchhhhHHHHHHHHHCCcEE-EEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 021530 26 NVVVFLHGFPEIWYSWRHQMVAVAAAGFRA-IAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFG 104 (311)
Q Consensus 26 ~~vvllHG~~~~~~~w~~~~~~l~~~~~~v-i~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (311)
..|||..||+.+...+.++. ...++.| +++|.|-.-.. . |+ -+.++++|||||||
T Consensus 12 ~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~d--------~-------~~------~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 12 ELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDFD--------F-------DL------SGYREIYLVAWSMG 67 (213)
T ss_pred eEEEEEecCCCChHHhhhcc---CCCCccEEEEecCcccccc--------c-------cc------ccCceEEEEEEeHH
Confidence 38999999999988776542 1224544 47777653210 0 11 24678999999999
Q ss_pred hHHHHHHHHhCCCceeeEEEec
Q 021530 105 ARPAYLFALLHPERVSGVITLG 126 (311)
Q Consensus 105 g~ia~~~a~~~p~~v~~lvl~~ 126 (311)
-++|.++....| +++-+.++
T Consensus 68 Vw~A~~~l~~~~--~~~aiAIN 87 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAIN 87 (213)
T ss_pred HHHHHHHhccCC--cceeEEEE
Confidence 999988755443 44444444
No 211
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.57 E-value=0.21 Score=45.23 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=59.6
Q ss_pred ceEEEECCCC---Cchhh--hHHHHHHHHHCC-cEEEEeCCC----------CCCCCCCCCCCCcCcHHHH---HHHHHH
Q 021530 26 NVVVFLHGFP---EIWYS--WRHQMVAVAAAG-FRAIAPDYR----------GYGLSDPPAEPEKASFKDI---TNDLLA 86 (311)
Q Consensus 26 ~~vvllHG~~---~~~~~--w~~~~~~l~~~~-~~vi~~Dl~----------G~G~S~~~~~~~~~~~~~~---a~dl~~ 86 (311)
|++|+|||.+ ++... ++ -..|.+.+ +-||.++.| .++..+... ....+.++ -+.+.+
T Consensus 95 PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~--~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 95 PVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFA--SNLGLLDQILALKWVRD 170 (491)
T ss_pred cEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcccccccc--ccccHHHHHHHHHHHHH
Confidence 4899999963 33333 43 34566655 667766554 333222111 12344443 345566
Q ss_pred HHHHhCC--CcEEEEEeCcChHHHHHHHHh--CCCceeeEEEeccC
Q 021530 87 TLDHLGI--NKVFLVAKDFGARPAYLFALL--HPERVSGVITLGVP 128 (311)
Q Consensus 87 ~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 128 (311)
-|++.|= ++|+|+|+|-|++.++.+.+- ....+++.|+.+.+
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~ 216 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGA 216 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCC
Confidence 6778874 579999999999988766553 22357777776644
No 212
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.46 E-value=0.039 Score=49.86 Aligned_cols=65 Identities=25% Similarity=0.385 Sum_probs=44.3
Q ss_pred ccceEEEeeCCcccCCCCCchhhhh------------cc--------cccccCCCeEEEEeCCCCCCccccChhHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIR------------SG--------KVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLV 303 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~------------~~--------~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 303 (311)
.++||+.+|..|.+++.-+.+..+. +. -..+...+.+++.|.++||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999996433332221 00 011234568899999999999999999999999
Q ss_pred HHHHh
Q 021530 304 LTFLN 308 (311)
Q Consensus 304 ~~Fl~ 308 (311)
..||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99986
No 213
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.33 E-value=0.48 Score=43.04 Aligned_cols=119 Identities=16% Similarity=0.150 Sum_probs=74.4
Q ss_pred eEEEEC---CEEEEEEecC-----CCCceEEEECCCCCchhhhHHHHHHHH----H--------------CCcEEEEeCC
Q 021530 7 KYIKVQ---GLNLHVAETG-----TGPNVVVFLHGFPEIWYSWRHQMVAVA----A--------------AGFRAIAPDY 60 (311)
Q Consensus 7 ~~~~~~---g~~i~y~~~G-----~g~~~vvllHG~~~~~~~w~~~~~~l~----~--------------~~~~vi~~Dl 60 (311)
.+++++ +..++|.-.. ..+|.||.|-|.|+++..- ..+..+- . +-.+++..|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 577775 7789987443 2234799999999988643 2222110 0 1246788887
Q ss_pred C-CCCCCCCCCCCC-cCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHh----C-----C-Cceee
Q 021530 61 R-GYGLSDPPAEPE-KASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALL----H-----P-ERVSG 121 (311)
Q Consensus 61 ~-G~G~S~~~~~~~-~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~-----p-~~v~~ 121 (311)
| |-|.|-.....+ ..+-+..|+|+..++.+. .=+++.|.|-|.+|...-.+|.. . | -.+++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 888886543211 235556677777766653 23579999999999776555552 2 1 24677
Q ss_pred EEEec
Q 021530 122 VITLG 126 (311)
Q Consensus 122 lvl~~ 126 (311)
+++-+
T Consensus 206 ~~IGN 210 (454)
T KOG1282|consen 206 YAIGN 210 (454)
T ss_pred EEecC
Confidence 77544
No 214
>PLN02324 triacylglycerol lipase
Probab=94.22 E-value=0.069 Score=47.50 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHh
Q 021530 80 ITNDLLATLDHLGIN--KVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 80 ~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+.+.|.+++++..-+ ++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 444566677665432 58999999999999998864
No 215
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.18 E-value=0.23 Score=49.57 Aligned_cols=93 Identities=17% Similarity=0.203 Sum_probs=66.1
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-CcEEEEEe
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAK 101 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGh 101 (311)
+++ |++|+|-.-+....+..++.. ...|-||.-.....+ .-|++..|.-.++-|+++.. .++.++|+
T Consensus 2122 e~~-~~Ffv~pIEG~tt~l~~la~r----------le~PaYglQ~T~~vP-~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2122 EEP-PLFFVHPIEGFTTALESLASR----------LEIPAYGLQCTEAVP-LDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cCC-ceEEEeccccchHHHHHHHhh----------cCCcchhhhccccCC-cchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 455 899999887776655443322 234677765443222 35899999988888888765 47999999
Q ss_pred CcChHHHHHHHHhC--CCceeeEEEecc
Q 021530 102 DFGARPAYLFALLH--PERVSGVITLGV 127 (311)
Q Consensus 102 S~Gg~ia~~~a~~~--p~~v~~lvl~~~ 127 (311)
|+|+.++..+|... .+....+++++.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 99999999988753 344566888874
No 216
>PLN02753 triacylglycerol lipase
Probab=93.99 E-value=0.078 Score=48.38 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHh
Q 021530 80 ITNDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 80 ~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
..+.+.+++++.+- -++++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34445556665432 379999999999999998863
No 217
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.80 E-value=0.086 Score=48.06 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhC----CCcEEEEEeCcChHHHHHHHHh
Q 021530 79 DITNDLLATLDHLG----INKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 79 ~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+..+++.++++... -.++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34566677776553 1359999999999999988864
No 218
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.76 E-value=0.17 Score=44.06 Aligned_cols=74 Identities=14% Similarity=0.042 Sum_probs=48.1
Q ss_pred cEEEEeCCC-CCCCCCCCCCCCcCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHhC----C----
Q 021530 53 FRAIAPDYR-GYGLSDPPAEPEKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALLH----P---- 116 (311)
Q Consensus 53 ~~vi~~Dl~-G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~----p---- 116 (311)
.+++.+|.| |-|.|.........+-++.|+|+..+|+.. .-.+++|.|-|.||..+-.+|..- .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 478999988 999996433222122234457777766652 335799999999999777666531 1
Q ss_pred --CceeeEEEec
Q 021530 117 --ERVSGVITLG 126 (311)
Q Consensus 117 --~~v~~lvl~~ 126 (311)
=.++++++.+
T Consensus 82 ~~inLkGi~IGN 93 (319)
T PLN02213 82 PPINLQGYMLGN 93 (319)
T ss_pred CceeeeEEEeCC
Confidence 1466777554
No 219
>PLN02802 triacylglycerol lipase
Probab=93.73 E-value=0.1 Score=47.51 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHh
Q 021530 80 ITNDLLATLDHLGI--NKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 80 ~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
..+.+.++++...- .++++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34455566665432 258999999999999988774
No 220
>PLN02719 triacylglycerol lipase
Probab=93.49 E-value=0.11 Score=47.38 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHh
Q 021530 80 ITNDLLATLDHLGI-----NKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 80 ~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+.+.|.+++++..- .++++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34445555555432 269999999999999998864
No 221
>PLN02761 lipase class 3 family protein
Probab=93.08 E-value=0.14 Score=46.82 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhC------CCcEEEEEeCcChHHHHHHHH
Q 021530 80 ITNDLLATLDHLG------INKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 80 ~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
+.+.|..+++..+ --++++.|||+||.+|...|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4445555665542 126999999999999998875
No 222
>PLN02209 serine carboxypeptidase
Probab=92.87 E-value=0.24 Score=45.07 Aligned_cols=65 Identities=20% Similarity=0.407 Sum_probs=48.7
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhc---------------cc---ccccCCC-eEEEEeCCCCCCccccChhHHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRS---------------GK---VKDFVPN-LEIIRLSEGSHFVQEQSPEEVNQLVL 304 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~---------------~~---l~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 304 (311)
.+++|+..|+.|.+++..+.+.+..+ .+ ..+...+ .+++.+.+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 47999999999999976555444321 00 1123454 88899999999996 59999999999
Q ss_pred HHHhh
Q 021530 305 TFLNK 309 (311)
Q Consensus 305 ~Fl~~ 309 (311)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 223
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.72 E-value=0.32 Score=44.22 Aligned_cols=65 Identities=17% Similarity=0.310 Sum_probs=48.3
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcc---------------c---ccccCC-CeEEEEeCCCCCCccccChhHHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSG---------------K---VKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVL 304 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~---------------~---l~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 304 (311)
.++||+..|+.|.+++..+.+.++.+- + ..+... +.+++.+.+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 479999999999999766554443210 0 112233 388899999999997 59999999999
Q ss_pred HHHhh
Q 021530 305 TFLNK 309 (311)
Q Consensus 305 ~Fl~~ 309 (311)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 224
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=92.66 E-value=0.43 Score=44.91 Aligned_cols=102 Identities=21% Similarity=0.230 Sum_probs=56.1
Q ss_pred ceEEEECCCC---CchhhhHHHH-HHHHH-CCcEEEEeCCC----CCCCCCCCCCCCcCcHHHHHHHHH---HHHHHhC-
Q 021530 26 NVVVFLHGFP---EIWYSWRHQM-VAVAA-AGFRAIAPDYR----GYGLSDPPAEPEKASFKDITNDLL---ATLDHLG- 92 (311)
Q Consensus 26 ~~vvllHG~~---~~~~~w~~~~-~~l~~-~~~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~a~dl~---~~l~~l~- 92 (311)
|++|++||.+ ++...+.... ..+.. +..=||.+..| |+..+.....+..+.+.++...+. +-+...|
T Consensus 113 pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGG 192 (545)
T KOG1516|consen 113 PVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGG 192 (545)
T ss_pred CEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCC
Confidence 4899999974 3322232111 12222 22344444443 555443222235677776555444 3344443
Q ss_pred -CCcEEEEEeCcChHHHHHHHHhC--CCceeeEEEecc
Q 021530 93 -INKVFLVAKDFGARPAYLFALLH--PERVSGVITLGV 127 (311)
Q Consensus 93 -~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~ 127 (311)
.++++|+|||-||..+..+.... ...+.+.|.+++
T Consensus 193 dp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 193 DPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred CCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 57899999999999987766632 245566665543
No 225
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=92.56 E-value=0.11 Score=43.97 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=61.3
Q ss_pred EEEEEecCCCC----ceEEEECCC--CCchhhhHHHHHHHHHCC----cEEEEeCCCCCCCCCCCCCCCcCcHHH----H
Q 021530 15 NLHVAETGTGP----NVVVFLHGF--PEIWYSWRHQMVAVAAAG----FRAIAPDYRGYGLSDPPAEPEKASFKD----I 80 (311)
Q Consensus 15 ~i~y~~~G~g~----~~vvllHG~--~~~~~~w~~~~~~l~~~~----~~vi~~Dl~G~G~S~~~~~~~~~~~~~----~ 80 (311)
.+.|...|-.+ |.+++.||- ..+...|. ++..+...+ --+|.+|. ...... ....+..++ +
T Consensus 84 ~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~---~d~~~R-~~~~~~n~~~~~~L 158 (299)
T COG2382 84 RVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDY---IDVKKR-REELHCNEAYWRFL 158 (299)
T ss_pred EEEEeCCCCCccccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCC---CCHHHH-HHHhcccHHHHHHH
Confidence 45566556221 378999983 44554554 344454432 34444442 221110 001123333 3
Q ss_pred HHHHHHHHHHh-C----CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEecc
Q 021530 81 TNDLLATLDHL-G----INKVFLVAKDFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 81 a~dl~~~l~~l-~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
++.|.=++++- . -+.-+|.|-|+||.+++..++.||+++-.++..++
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sp 210 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSG 210 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCC
Confidence 44444444442 1 13468999999999999999999999988886653
No 226
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=92.55 E-value=1.9 Score=40.11 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=73.5
Q ss_pred CCEEEEEEecCCC-----CceEEEECCCCCchh--hhHHHHHHHHHCCcEEEEeCCCCCCCCCCC--CCCCcCcHHHHHH
Q 021530 12 QGLNLHVAETGTG-----PNVVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP--AEPEKASFKDITN 82 (311)
Q Consensus 12 ~g~~i~y~~~G~g-----~~~vvllHG~~~~~~--~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~a~ 82 (311)
||.+|.|.+.+.| .|++|.-=|...-+. .|..+....++.|...+...+||=|+=.+. .....-+-....+
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfd 482 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFD 482 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhH
Confidence 9999999877421 236666555433222 355555667778888899999998875432 0000111122344
Q ss_pred HHHHHHHHh---CC---CcEEEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 83 DLLATLDHL---GI---NKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 83 dl~~~l~~l---~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
|.+++.+.| |+ +++-+-|-|-||.+.-...-.+||.+.++|+-
T Consensus 483 Df~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e 531 (648)
T COG1505 483 DFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE 531 (648)
T ss_pred HHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeec
Confidence 555554444 55 56889999999998877777899998888753
No 227
>PLN02847 triacylglycerol lipase
Probab=92.24 E-value=0.25 Score=45.90 Aligned_cols=20 Identities=25% Similarity=0.477 Sum_probs=18.0
Q ss_pred cEEEEEeCcChHHHHHHHHh
Q 021530 95 KVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 95 ~~~lvGhS~Gg~ia~~~a~~ 114 (311)
++.++|||+||.+|..++..
T Consensus 252 kLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 78999999999999988774
No 228
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=92.18 E-value=0.29 Score=41.51 Aligned_cols=61 Identities=23% Similarity=0.392 Sum_probs=42.9
Q ss_pred cceEEEeeCCcccCCCCCchhhhhcccccccCC-CeEEEEeCCCCCCccccChh---HHHHHHHHHHhhC
Q 021530 245 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQSPE---EVNQLVLTFLNKH 310 (311)
Q Consensus 245 ~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~i~~Fl~~~ 310 (311)
+|+|+++|+.|.++|........ ..... ..+..++++++|......+. +-.+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~-----~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLY-----EAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHH-----hhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 89999999999999876544322 11112 46788888999988864443 5667777887653
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.67 E-value=0.26 Score=43.23 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh
Q 021530 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
..+.+++..+++...--++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4677788888888775579999999999999987773
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.31 E-value=1.8 Score=35.63 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=45.4
Q ss_pred CcEEEEeCCCC-CCC-CCCCCCCCcCcHHHHHHHHHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhC-----CC-ceee
Q 021530 52 GFRAIAPDYRG-YGL-SDPPAEPEKASFKDITNDLLATLDHL--GINKVFLVAKDFGARPAYLFALLH-----PE-RVSG 121 (311)
Q Consensus 52 ~~~vi~~Dl~G-~G~-S~~~~~~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~-----p~-~v~~ 121 (311)
++++..++.|. ++. +........-|..+-++.+.+.+++. .-++++++|+|.|+.|+.....+. |. ...+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 45566666665 211 11000112346666677777666652 226799999999999998765543 11 2445
Q ss_pred EEEeccCC
Q 021530 122 VITLGVPF 129 (311)
Q Consensus 122 lvl~~~~~ 129 (311)
+|+++-|.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 77777543
No 231
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.05 E-value=0.53 Score=37.93 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=40.6
Q ss_pred CcEEEEeCCCCCCCCCCC-C---CC---CcCcHHHHHHHHHHHHHHhCC-CcEEEEEeCcChHHHHHHHHhC
Q 021530 52 GFRAIAPDYRGYGLSDPP-A---EP---EKASFKDITNDLLATLDHLGI-NKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~-~---~~---~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
..+|++|=.|=-...... . .. ....+.+..+....+|+..+- ++++|+|||-|+.+..++...+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 468888766644333222 0 00 123444555555566777754 4799999999999999987764
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.60 E-value=1.3 Score=38.02 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=68.2
Q ss_pred EEEE-CCEEEEEEec----C--CCCceEEEECCCCCchhh----hHHHHHH----------HHHCCcEEEEeCCC-CCCC
Q 021530 8 YIKV-QGLNLHVAET----G--TGPNVVVFLHGFPEIWYS----WRHQMVA----------VAAAGFRAIAPDYR-GYGL 65 (311)
Q Consensus 8 ~~~~-~g~~i~y~~~----G--~g~~~vvllHG~~~~~~~----w~~~~~~----------l~~~~~~vi~~Dl~-G~G~ 65 (311)
++++ .+..++|..+ . +.+|..+.+.|.|+.+.. |..+-|. .++ ...++.+|-| |-|.
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-DADLLFVDNPVGAGF 85 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-hccEEEecCCCcCce
Confidence 4444 4555554422 1 233357889998765542 3332210 122 2467777754 9999
Q ss_pred CCCCCCC-CcCcHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHhC
Q 021530 66 SDPPAEP-EKASFKDITNDLLATLDHL-------GINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 66 S~~~~~~-~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
|-..... ..-+..+.|.|+.++|+.+ +-.+++++.-|.||-+|..+++..
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 9764321 2236788999999999885 335799999999999998887754
No 233
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.91 E-value=0.85 Score=42.27 Aligned_cols=48 Identities=29% Similarity=0.533 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCC---CcEEEEEeCcChHHHHHHHHh-----CCC------ceeeEEEeccC
Q 021530 81 TNDLLATLDHLGI---NKVFLVAKDFGARPAYLFALL-----HPE------RVSGVITLGVP 128 (311)
Q Consensus 81 a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~ 128 (311)
+..+.+.+.+.++ .++.++||||||..+=.+.+. .|+ ...+++++++|
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3344444444454 469999999999988766553 232 35677777755
No 234
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=89.85 E-value=0.81 Score=41.62 Aligned_cols=65 Identities=23% Similarity=0.358 Sum_probs=48.8
Q ss_pred cceEEEeeCCcccCCCCCchhhhhc----------cccc---------ccCCCeEEEEeCCCCCCccccChhHHHHHHHH
Q 021530 245 VPALLILGEKDYFLKFPGIEDYIRS----------GKVK---------DFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLT 305 (311)
Q Consensus 245 ~P~L~i~G~~D~~~~~~~~~~~~~~----------~~l~---------~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 305 (311)
.++||..|+.|.++|.-+.+..+++ -++. +...+..+..+.|+||+++..+|++....+.+
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999977655543211 0111 12334667889999999999999999999999
Q ss_pred HHhh
Q 021530 306 FLNK 309 (311)
Q Consensus 306 Fl~~ 309 (311)
||..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9975
No 235
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=89.56 E-value=2.5 Score=37.01 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=40.3
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCC-eEEEEeCCCCCCccccChhHHHHHHHHHHh
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN-LEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
++.+|-.+|.|+.|.++.++...- ..+.+|+ -.+.++||..|..- ++.+.+.+..|+.
T Consensus 327 RLalpKyivnaSgDdff~pDsa~l------Yyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANL------YYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred hccccceeecccCCcccCCCccce------eeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 678899999999999998776432 3456776 66778899888653 3344445555553
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=86.38 E-value=0.64 Score=36.84 Aligned_cols=64 Identities=16% Similarity=0.139 Sum_probs=45.7
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCC--eEEEEeCCCCCCccccCh---hHHHHHHHHHHhhC
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN--LEIIRLSEGSHFVQEQSP---EEVNQLVLTFLNKH 310 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~gH~~~~e~p---~~~~~~i~~Fl~~~ 310 (311)
+++.|-|-|+.|.++..-.. ..+..|...+|. -..++.+||||+--+.=+ +++.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT---~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQT---HAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHH---HHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 56788899999999865322 123456666664 556777899998877655 56778888888753
No 237
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.88 E-value=2.1 Score=33.22 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=61.4
Q ss_pred CEEEEEEecC-CCCceEEEECCCCCchhhhHH--HH---HHHHHCC-cEEEEeCCCCCCCCCCCCCCCcC---cHHHHHH
Q 021530 13 GLNLHVAETG-TGPNVVVFLHGFPEIWYSWRH--QM---VAVAAAG-FRAIAPDYRGYGLSDPPAEPEKA---SFKDITN 82 (311)
Q Consensus 13 g~~i~y~~~G-~g~~~vvllHG~~~~~~~w~~--~~---~~l~~~~-~~vi~~Dl~G~G~S~~~~~~~~~---~~~~~a~ 82 (311)
+..|.+...| .|- |||...--.+....+.. .+ ..+.+.| ...+++| |--.-+... .... .....+.
T Consensus 14 ~RdMel~ryGHaG~-pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a-~h~~~adr~~rH~A 89 (227)
T COG4947 14 NRDMELNRYGHAGI-PVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLA-THKNAADRAERHRA 89 (227)
T ss_pred cchhhhhhccCCCC-cEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhh-hcCCHHHHHHHHHH
Confidence 3467777888 455 55555544444333322 12 2233333 4555554 543222211 1111 1111222
Q ss_pred HHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEEEeccCC
Q 021530 83 DLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPF 129 (311)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (311)
--.-++++.=.....+-|-|||+.-|..+..+||+...++|.++..+
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 22223443333456778999999999999999999999999887543
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=82.83 E-value=3.1 Score=35.10 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=21.3
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 92 GINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
.-.++.|-|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3357899999999999999988874
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=82.83 E-value=3.1 Score=35.10 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=21.3
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 92 GINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
.-.++.|-|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3357899999999999999988874
No 240
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=82.76 E-value=14 Score=25.99 Aligned_cols=83 Identities=16% Similarity=0.075 Sum_probs=51.8
Q ss_pred hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH--HHHHHHHhCCCc
Q 021530 41 WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR--PAYLFALLHPER 118 (311)
Q Consensus 41 w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~--ia~~~a~~~p~~ 118 (311)
+..+...+...++-.=.+.++.+|.+-...-... .-+.=.+.|.++++..--.+++|||-|--.= +-..+|.+||++
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~-~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSG-AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCC-chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 4333344434457666777888866532110011 1112245677888888888999999886553 334578899999
Q ss_pred eeeEEE
Q 021530 119 VSGVIT 124 (311)
Q Consensus 119 v~~lvl 124 (311)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 998865
No 241
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.45 E-value=5.1 Score=36.71 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=30.4
Q ss_pred hCCCcEEEEEeCcChHHHHHHHHh-----CCCceeeEEEeccCC
Q 021530 91 LGINKVFLVAKDFGARPAYLFALL-----HPERVSGVITLGVPF 129 (311)
Q Consensus 91 l~~~~~~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~ 129 (311)
+|..+++|||+|+|+.+...+... .-..|..++++++|.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 578899999999999998865552 224688888998764
No 242
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=81.44 E-value=23 Score=30.29 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=70.7
Q ss_pred eEEEECCCCCchhh-hHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 105 (311)
.|+.+--..++... .+..+..|+. ...|+.-|.-.--.- +.....+.+++|.+-+++++..+|.+ +++++-+.=+
T Consensus 105 kvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~V--p~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 105 KVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARMV--PLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred eEEEEecccccHHHHHHHHHHHhcc-ccceeEeecccccee--ecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 56666666665544 5556677776 588888887664333 22335689999999999999999975 7888777654
Q ss_pred -----HHHHHHHHhCCCceeeEEEeccCCC
Q 021530 106 -----RPAYLFALLHPERVSGVITLGVPFI 130 (311)
Q Consensus 106 -----~ia~~~a~~~p~~v~~lvl~~~~~~ 130 (311)
.|++.-+...|..=.+++++++|..
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 3444444457778889999987754
No 243
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=80.63 E-value=12 Score=30.08 Aligned_cols=60 Identities=23% Similarity=0.255 Sum_probs=45.2
Q ss_pred EEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc----ChHHHHHHHHhCC-CceeeEE
Q 021530 54 RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF----GARPAYLFALLHP-ERVSGVI 123 (311)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~lv 123 (311)
+|+..|.+++ ..|+.+.+++.+.+++++.+ -.++|+|+|. |..++-++|++.- ..+...+
T Consensus 79 ~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 79 RAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred EEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 7777776553 34688899999999999988 4699999998 8899999888742 2344443
No 244
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.04 E-value=5 Score=30.82 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=51.9
Q ss_pred CCCceEEEECCCCCchhhhHHHHHHHHHCCcE-EEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 23 TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFR-AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~-vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
+|++.||..-||+........++ +.+++. ++++|....... ..+..+ +.+.||.+
T Consensus 9 qgd~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~ld--------fDfsAy-------------~hirlvAw 64 (214)
T COG2830 9 QGDHLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNLD--------FDFSAY-------------RHIRLVAW 64 (214)
T ss_pred CCCEEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCcc--------cchhhh-------------hhhhhhhh
Confidence 34446788889998888776653 234554 558998765421 222221 34678999
Q ss_pred CcChHHHHHHHHhCCCceeeEEEecc
Q 021530 102 DFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 102 S~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
|||-+||-++....+ +++-+.+++
T Consensus 65 SMGVwvAeR~lqg~~--lksatAiNG 88 (214)
T COG2830 65 SMGVWVAERVLQGIR--LKSATAING 88 (214)
T ss_pred hHHHHHHHHHHhhcc--ccceeeecC
Confidence 999999999888764 555555553
No 245
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=79.40 E-value=2 Score=40.39 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=64.8
Q ss_pred eEEEECCCCC-chh-hhHHHHHHHHHCCcEEEEeCCCCCCCCCCC--CC----CCcCcHHHHHHHHHHHHHHh--CCCcE
Q 021530 27 VVVFLHGFPE-IWY-SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP--AE----PEKASFKDITNDLLATLDHL--GINKV 96 (311)
Q Consensus 27 ~vvllHG~~~-~~~-~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~----~~~~~~~~~a~dl~~~l~~l--~~~~~ 96 (311)
.+|..+|.-+ +.. .|...-.-|++.|+-+...|.||=|.=+.. .+ ...-+++++.....-++++- .-++.
T Consensus 472 ~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 472 LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 5666665432 222 354332334456777778899997764321 11 12347777766666666542 23578
Q ss_pred EEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 97 FLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 97 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
.+.|.|-||.+..++.=.+||.+..+|+-
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhhc
Confidence 99999999999988888999999888753
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=79.23 E-value=4.2 Score=37.55 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=53.2
Q ss_pred HHCCcEEEEeCCCCCCCCCC--CC--CCC--------cCcHHHHHHHHHHHHHHh---CCCcEEEEEeCcChHHHHHHHH
Q 021530 49 AAAGFRAIAPDYRGYGLSDP--PA--EPE--------KASFKDITNDLLATLDHL---GINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 49 ~~~~~~vi~~Dl~G~G~S~~--~~--~~~--------~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
+..||-++.=| =||..+.. .. ... ..++..++.--.+++++. ..++-.+.|.|-||.=++..|.
T Consensus 56 ~~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 35589999999 47776643 10 000 112333333334445443 4567899999999999999999
Q ss_pred hCCCceeeEEEecc
Q 021530 114 LHPERVSGVITLGV 127 (311)
Q Consensus 114 ~~p~~v~~lvl~~~ 127 (311)
+||+-.++++..++
T Consensus 135 ryP~dfDGIlAgaP 148 (474)
T PF07519_consen 135 RYPEDFDGILAGAP 148 (474)
T ss_pred hChhhcCeEEeCCc
Confidence 99999999997654
No 247
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=77.76 E-value=9.7 Score=36.14 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=67.0
Q ss_pred CCCceEEEECCCCCchh--hhHHHHHHHHHCCcEEEEeCCCCCCCCCCC-------CCCCcCcHHHHHHHHHHHHHHhC-
Q 021530 23 TGPNVVVFLHGFPEIWY--SWRHQMVAVAAAGFRAIAPDYRGYGLSDPP-------AEPEKASFKDITNDLLATLDHLG- 92 (311)
Q Consensus 23 ~g~~~vvllHG~~~~~~--~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~~a~dl~~~l~~l~- 92 (311)
+.| .||..=|--+.+- .|....-.|++.|+-.-.--.||=|.=... .. ..-|+.++.+....|++.--
T Consensus 447 ~~p-~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~-K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 447 SAP-LLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLN-KKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCc-EEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhh-ccccHHHHHHHHHHHHHcCcC
Confidence 444 5555555422222 354444455666776667778887764321 11 23588877776666665421
Q ss_pred -CCcEEEEEeCcChHHHHHHHHhCCCceeeEEEe
Q 021530 93 -INKVFLVAKDFGARPAYLFALLHPERVSGVITL 125 (311)
Q Consensus 93 -~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 125 (311)
-+++.++|-|-||++....+-..|+.++++|+-
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 247999999999999999999999999999864
No 248
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=77.19 E-value=18 Score=30.86 Aligned_cols=74 Identities=22% Similarity=0.330 Sum_probs=41.4
Q ss_pred eEEEEC--CCCCch--------------hhhHHHHHHHHHCCcE--EEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH
Q 021530 27 VVVFLH--GFPEIW--------------YSWRHQMVAVAAAGFR--AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (311)
Q Consensus 27 ~vvllH--G~~~~~--------------~~w~~~~~~l~~~~~~--vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l 88 (311)
++|++| |.|.+. ..+...+..+.+.|.. =|++|+ |+|.+... ..++. +-..+..|
T Consensus 135 ~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~----~~n~~-ll~~l~~l- 207 (282)
T PRK11613 135 PVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLDP-GFGFGKNL----SHNYQ-LLARLAEF- 207 (282)
T ss_pred CEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEeC-CCCcCCCH----HHHHH-HHHHHHHH-
Confidence 688888 455442 2334455556666764 778885 78866421 11221 22223222
Q ss_pred HHhCCCcEEEEEeCcChHHHH
Q 021530 89 DHLGINKVFLVAKDFGARPAY 109 (311)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~ia~ 109 (311)
..+ ....++|+|-=+.+..
T Consensus 208 ~~l--g~Pilvg~SRKsfig~ 226 (282)
T PRK11613 208 HHF--NLPLLVGMSRKSMIGQ 226 (282)
T ss_pred HhC--CCCEEEEecccHHHHh
Confidence 233 4579999998777663
No 249
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=76.37 E-value=1.4 Score=35.51 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=32.1
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCcc
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQ 292 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~ 292 (311)
-.|++++.|+.|.+.+ ....+ .+.+++.--.++++++++++|...
T Consensus 166 ~Pp~~i~~g~~D~l~~--~~~~~--~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 166 LPPTLIIHGEDDVLVD--DSLRF--AEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp CHEEEEEEETTSTTHH--HHHHH--HHHHHHTT-EEEEEEETTEETTGG
T ss_pred CCCeeeeccccccchH--HHHHH--HHHHHHCCCCEEEEEECCCeEEee
Confidence 3589999999998763 22333 245666555799999999999764
No 250
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=75.12 E-value=3.5 Score=35.69 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=28.0
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+++.+++.|+.--.++|-|+|+.++..||+.++
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 666777789987788999999999999998753
No 251
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.09 E-value=1.9 Score=37.49 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 021530 83 DLLATLDHLGINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
-+.++++..|+++-.++|||+|=..|+..|.
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHCC
Confidence 3556778899999999999999888775543
No 252
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=74.89 E-value=3.2 Score=35.59 Aligned_cols=30 Identities=20% Similarity=0.166 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
+.++++.+|+++-.++|||+|-..|+..+.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445677889999999999999988876654
No 253
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=72.36 E-value=3.5 Score=36.20 Aligned_cols=54 Identities=20% Similarity=0.194 Sum_probs=40.7
Q ss_pred CccccceEEEeeCCcccCCCCCchhhhhcccccccCCCe--EEEEeCCCCCCccccChhHH
Q 021530 241 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL--EIIRLSEGSHFVQEQSPEEV 299 (311)
Q Consensus 241 ~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~--~~~~i~~~gH~~~~e~p~~~ 299 (311)
..+++|++++.|..|.+.|+..-. ......+|+. -+.+++++.|+-+.|-.+++
T Consensus 248 ~~v~~P~~~~a~s~D~~aP~~~~~-----~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 248 VKVTDPVLLAAGSADGFAPPVTEQ-----IRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeeecceeeecccccccCCccccc-----ccccccCCcchhheeecCCCccccccccCccc
Confidence 378999999999999976654322 2233456766 67888999999999987774
No 254
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=72.28 E-value=4.1 Score=35.28 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+-|++.|++.-.+.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 667778889999999999999999999999654
No 255
>PRK10279 hypothetical protein; Provisional
Probab=71.68 E-value=4.3 Score=35.03 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=28.7
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPE 117 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 117 (311)
+.+.+++.|+..-.+.|-|+|+.++..||....+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 5666777899888999999999999999987654
No 256
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=71.26 E-value=17 Score=28.98 Aligned_cols=53 Identities=21% Similarity=0.326 Sum_probs=34.8
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
..|+++|.|+++.-.. +. .+. .++++++.+|| ||.+-- +-+++++.|++-+++
T Consensus 139 ~~~v~CiyG~~E~d~~---cp------~l~--~~~~~~i~lpG-gHHfd~-dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 139 PAPVQCIYGEDEDDSL---CP------SLR--QPGVEVIALPG-GHHFDG-DYDALAKRILDALKA 191 (192)
T ss_pred CCeEEEEEcCCCCCCc---Cc------ccc--CCCcEEEEcCC-CcCCCC-CHHHHHHHHHHHHhc
Confidence 3599999999875321 11 111 26899999995 775544 467777777776653
No 257
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=71.24 E-value=4.1 Score=34.92 Aligned_cols=30 Identities=17% Similarity=-0.033 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
+.+++++.|+++..++|||+|=..|..++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 456677889999999999999988877654
No 258
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=70.37 E-value=5.2 Score=33.88 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+++.+++.|+.-=.+.|-|+|+.++..||..+
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 56666788997678899999999999999875
No 259
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=69.21 E-value=4.7 Score=34.35 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=24.9
Q ss_pred HHHHHHHhC-CCcEEEEEeCcChHHHHHHHHhC
Q 021530 84 LLATLDHLG-INKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 84 l~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+.+++++.| +++..++|||+|=..|...|...
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 445566777 99999999999998887776543
No 260
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.00 E-value=5.8 Score=30.94 Aligned_cols=33 Identities=21% Similarity=0.085 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+.+++.++..-.+.|-|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 455556668887899999999999999999754
No 261
>PRK12467 peptide synthase; Provisional
Probab=68.38 E-value=23 Score=42.08 Aligned_cols=95 Identities=12% Similarity=-0.002 Sum_probs=64.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC-CCcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG-INKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~-~~~~~lvGhS~Gg 105 (311)
.|++.|...++...+..+...+. .+..++.+..++.-.-+. ...++..++....+.+.... ..+..+.|+|+||
T Consensus 3694 ~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3694 ALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 59999998887777665554443 357888888776643322 22467777777666665543 3468999999999
Q ss_pred HHHHHHHHh---CCCceeeEEEec
Q 021530 106 RPAYLFALL---HPERVSGVITLG 126 (311)
Q Consensus 106 ~ia~~~a~~---~p~~v~~lvl~~ 126 (311)
.++..++.. ..+.+.-+.+++
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEe
Confidence 999988764 345565555553
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.93 E-value=6.7 Score=32.14 Aligned_cols=33 Identities=27% Similarity=0.262 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+.+++.+++.-.+.|-|.|+.+|..+|...+
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 444455568877789999999999999997653
No 263
>COG0218 Predicted GTPase [General function prediction only]
Probab=66.80 E-value=8.9 Score=30.72 Aligned_cols=15 Identities=33% Similarity=0.569 Sum_probs=12.9
Q ss_pred EEEeCCCCCCCCCCC
Q 021530 55 AIAPDYRGYGLSDPP 69 (311)
Q Consensus 55 vi~~Dl~G~G~S~~~ 69 (311)
+..+|+||||....+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 678999999998754
No 264
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=66.10 E-value=4.6 Score=31.12 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=29.5
Q ss_pred EeCCCCCCCCCCCC-CCCcCcHHHHHHHH----HHHHHHhC----CCcEEEEEeCcChH
Q 021530 57 APDYRGYGLSDPPA-EPEKASFKDITNDL----LATLDHLG----INKVFLVAKDFGAR 106 (311)
Q Consensus 57 ~~Dl~G~G~S~~~~-~~~~~~~~~~a~dl----~~~l~~l~----~~~~~lvGhS~Gg~ 106 (311)
.+-+-|||...... --..++..++|+-+ ..|-+..+ .++++|+|-|+++.
T Consensus 58 rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 58 RWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34456999872211 12468999999999 44555543 46788888888876
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=65.75 E-value=7.2 Score=30.99 Aligned_cols=33 Identities=33% Similarity=0.290 Sum_probs=26.0
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+.+++.++..=.+.|-|.|+.+|..++..++
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 444555668877789999999999999998643
No 266
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=60.51 E-value=15 Score=34.04 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=44.9
Q ss_pred ceEEEeeCCcccCCCCCchhhhhc--ccccc---cC-CCeEEEEeCCCCCCcccc--ChhHHHHHHHHHHhh
Q 021530 246 PALLILGEKDYFLKFPGIEDYIRS--GKVKD---FV-PNLEIIRLSEGSHFVQEQ--SPEEVNQLVLTFLNK 309 (311)
Q Consensus 246 P~L~i~G~~D~~~~~~~~~~~~~~--~~l~~---~~-~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~Fl~~ 309 (311)
-.|+.+|..|.++++.....|.++ +.+.. .+ .-.++..+||.+|+---. .+-.....|.+|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 458999999999998877766542 12221 12 238999999999987555 344566778888875
No 267
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=59.01 E-value=28 Score=26.61 Aligned_cols=48 Identities=25% Similarity=0.226 Sum_probs=32.0
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCc-EEEEEeCcChHHHHH
Q 021530 51 AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINK-VFLVAKDFGARPAYL 110 (311)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~ 110 (311)
.+-.||+.|.+|= .++-+++|+.+..+.+ .| ++ .+++|-|.|=.=++.
T Consensus 66 ~~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~-~G-~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 66 KGSYVVLLDIRGK----------ALSSEEFADFLERLRD-DG-RDISFLIGGADGLSEAVK 114 (155)
T ss_pred CCCeEEEEecCCC----------cCChHHHHHHHHHHHh-cC-CeEEEEEeCcccCCHHHH
Confidence 4679999999983 3466677877776644 35 44 567788777554443
No 268
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=57.83 E-value=12 Score=35.18 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=34.4
Q ss_pred cc-ccceEEEeeCCcccCCCC-CchhhhhcccccccC-CCeEEEEeCCCCCCcc
Q 021530 242 TV-KVPALLILGEKDYFLKFP-GIEDYIRSGKVKDFV-PNLEIIRLSEGSHFVQ 292 (311)
Q Consensus 242 ~i-~~P~L~i~G~~D~~~~~~-~~~~~~~~~~l~~~~-~~~~~~~i~~~gH~~~ 292 (311)
++ -.|+++++|..|.++|.. ..+.|....+..+-. ...+++++.|+-|+=.
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 44 579999999999999764 344454322222222 4588899999888753
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.75 E-value=12 Score=30.47 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+.+++.++.-=.+.|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 455566678866689999999999999999875
No 270
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.67 E-value=12 Score=29.32 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPE 117 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 117 (311)
+.+.+++.++.-=.+.|-|.|+.+|..++...+.
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3444456677666888999999999999987653
No 271
>PRK07451 translation initiation factor Sui1; Validated
Probab=56.83 E-value=73 Score=23.09 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=48.7
Q ss_pred EEEEEecC-CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC
Q 021530 15 NLHVAETG-TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI 93 (311)
Q Consensus 15 ~i~y~~~G-~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (311)
+|.+...| .|. .|-+|-|++....+...++..|-.. -|+|-|-....- -=.-+..+.+.++|.+.|.
T Consensus 41 rI~~~r~gR~GK-~VTvV~Gl~~~~~dlk~LaK~LK~k---------~gcGGtvkd~~I--elQGD~r~~v~~~L~~~Gf 108 (115)
T PRK07451 41 RVQATRSGRKGK-TVTVITGFQHKPETLAKLLKQLKTQ---------CGSGGTVKDNTI--EIQGDHRQKILEILIKLGY 108 (115)
T ss_pred EEEEEecCCCCC-eEEEEeCCCCCHHHHHHHHHHHHHH---------hcCCceEcCCEE--EEcCcHHHHHHHHHHHCCC
Confidence 45555567 466 8999999998777777777776543 388888543210 1112577889999999987
Q ss_pred CcEEEEE
Q 021530 94 NKVFLVA 100 (311)
Q Consensus 94 ~~~~lvG 100 (311)
++.++|
T Consensus 109 -~~k~~g 114 (115)
T PRK07451 109 -KAKISG 114 (115)
T ss_pred -eEeecc
Confidence 455554
No 272
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=56.61 E-value=71 Score=22.88 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=48.8
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 105 (311)
.||.-|| .-+......+..+... .-.+.++++.- ..+.+++.+.+.+.+++++-.+-.++=-+++|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~-----------~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP-----------DESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT-----------TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC-----------CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 5788999 4555556666666654 34677776432 23778999999999998875555556566666
Q ss_pred HHHHHHHH
Q 021530 106 RPAYLFAL 113 (311)
Q Consensus 106 ~ia~~~a~ 113 (311)
......+.
T Consensus 69 gsp~n~a~ 76 (116)
T PF03610_consen 69 GSPFNEAA 76 (116)
T ss_dssp SHHHHHHH
T ss_pred CccchHHH
Confidence 55444443
No 273
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.94 E-value=24 Score=29.53 Aligned_cols=96 Identities=27% Similarity=0.292 Sum_probs=54.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCC----------CCCCCCCCCCCCCcCcHH--------HHHHHHHHHH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDY----------RGYGLSDPPAEPEKASFK--------DITNDLLATL 88 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl----------~G~G~S~~~~~~~~~~~~--------~~a~dl~~~l 88 (311)
.+++.||+..+...-......+...++.++..|. +|++.+.... ...... .+..+.....
T Consensus 51 ~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 51 AVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYA--EDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred eEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccc--cccchhheeeeccccccHHHHHHh
Confidence 6999999988776543334455566788777764 3333322211 011111 1111111112
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCC--ceeeEEEec
Q 021530 89 DHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVITLG 126 (311)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 126 (311)
.. ..+....|+++|+..+..++...+. ...+++..+
T Consensus 129 ~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 166 (299)
T COG1073 129 AS--LGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWG 166 (299)
T ss_pred hh--cCcceEEEEEeeccchHHHhhcchhHHHhhccccee
Confidence 11 2578999999999999999988874 334444444
No 274
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=55.94 E-value=11 Score=35.47 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=25.8
Q ss_pred HHHHH-HHhCCCcEEEEEeCcChHHHHHHHHhC
Q 021530 84 LLATL-DHLGINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 84 l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+.+++ +.+|+++-.++|||+|=..|+..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 44556 589999999999999998888776644
No 275
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=53.61 E-value=31 Score=31.77 Aligned_cols=66 Identities=21% Similarity=0.110 Sum_probs=40.1
Q ss_pred cccceEEEeeCCcccCCCCCchhhh-hcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 243 VKVPALLILGEKDYFLKFPGIEDYI-RSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 243 i~~P~L~i~G~~D~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
-+..++...|=+|..+++-....-. .....+..-+...+.++ ++||+++..+|+...+.+..|+..
T Consensus 424 ~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 424 PKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred CcceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 3566777777777776553321111 11112222223444555 589999999999999999888753
No 276
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=53.12 E-value=85 Score=22.74 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=45.4
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc-Ch
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF-GA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~-Gg 105 (311)
.||.-|| .-+......+..+....-.+.++++.- .-+.+++.+.+.++++..+-.+-.++=-++ ||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~-----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP-----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC-----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 5788899 444455555655544333666666543 236778888899999988654445555666 77
Q ss_pred HHHHHH
Q 021530 106 RPAYLF 111 (311)
Q Consensus 106 ~ia~~~ 111 (311)
......
T Consensus 70 Sp~n~~ 75 (122)
T cd00006 70 SPNNAA 75 (122)
T ss_pred CHHHHH
Confidence 765443
No 277
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=52.19 E-value=15 Score=29.08 Aligned_cols=33 Identities=9% Similarity=0.197 Sum_probs=24.5
Q ss_pred eEEEEC---CCCCchhhhHHHHHHHHHCCcEEEEeC
Q 021530 27 VVVFLH---GFPEIWYSWRHQMVAVAAAGFRAIAPD 59 (311)
Q Consensus 27 ~vvllH---G~~~~~~~w~~~~~~l~~~~~~vi~~D 59 (311)
.||++| +...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 589999 234456667778888888899988764
No 278
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=51.83 E-value=90 Score=26.57 Aligned_cols=61 Identities=20% Similarity=0.136 Sum_probs=36.2
Q ss_pred EEEEeCCCCCCC--------CCCCC----CC-CcCcHHHHHHHHHH-HHHHhC-CCcEEEEEeCcChHHHHHHHHh
Q 021530 54 RAIAPDYRGYGL--------SDPPA----EP-EKASFKDITNDLLA-TLDHLG-INKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 54 ~vi~~Dl~G~G~--------S~~~~----~~-~~~~~~~~a~dl~~-~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+.+++-.+|-|. +.... +. -..++++-+.+... +++... -+++.++|.|.|+..|-.+|-.
T Consensus 37 ~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 37 RQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred ceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 556677788888 11110 00 11344444333333 334443 3578999999999999988864
No 279
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=51.76 E-value=20 Score=27.94 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 115 (311)
+.+.+++.++..=.+.|-|.|+.+|..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 44444556776668999999999999998754
No 280
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=51.43 E-value=35 Score=27.58 Aligned_cols=60 Identities=22% Similarity=0.424 Sum_probs=40.0
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCC-CeEEEEeCCCCCCcccc-ChhHHHHHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQ-SPEEVNQLVLTFL 307 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~gH~~~~e-~p~~~~~~i~~Fl 307 (311)
.+|.++.....|+........ ......+..+ ..+++.++ ++|+.++. +..++++.|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLE---EADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGG---HHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhh---hHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 567888889888766322111 1111233444 57899997 59999887 7788888888775
No 281
>COG3933 Transcriptional antiterminator [Transcription]
Probab=50.78 E-value=1.5e+02 Score=27.20 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=55.8
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
.||..||. +++.+...++..|+.. =-++++|+|= +.+..+..+.+.+-+++....+=.++=-+||+.
T Consensus 111 vIiiAHG~-sTASSmaevanrLL~~-~~~~aiDMPL-----------dvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 111 VIIIAHGY-STASSMAEVANRLLGE-EIFIAIDMPL-----------DVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred EEEEecCc-chHHHHHHHHHHHhhc-cceeeecCCC-----------cCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 79999998 4455566788888864 5677888763 347788899999999998887767777799999
Q ss_pred HHHHH
Q 021530 107 PAYLF 111 (311)
Q Consensus 107 ia~~~ 111 (311)
.+..=
T Consensus 178 ~~f~~ 182 (470)
T COG3933 178 TSFGS 182 (470)
T ss_pred HHHHH
Confidence 87653
No 282
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=50.57 E-value=7.4 Score=35.36 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeE
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGV 122 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 122 (311)
+.+.+.+.|+.+=.+.|-|.|+.+|..+|..-++++..+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 455555668877789999999999999999766665443
No 283
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=49.84 E-value=7.5 Score=34.78 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=31.7
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEE
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVI 123 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 123 (311)
+.+.+.+.|+.+=.+.|-|.|+.||..+|..-++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 5556667788888899999999999999996666655554
No 284
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=49.82 E-value=41 Score=25.86 Aligned_cols=45 Identities=22% Similarity=0.307 Sum_probs=29.7
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCc-EEEEEeCcChH
Q 021530 51 AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINK-VFLVAKDFGAR 106 (311)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ 106 (311)
.+-.+|+.|..| ..+|-.++|+.+....+. |.++ +++||-+.|=.
T Consensus 66 ~~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 66 PNDYVILLDERG----------KQLSSEEFAKKLERWMNQ-GKSDIVFIIGGADGLS 111 (155)
T ss_dssp TTSEEEEE-TTS----------EE--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB--
T ss_pred CCCEEEEEcCCC----------ccCChHHHHHHHHHHHhc-CCceEEEEEecCCCCC
Confidence 467899999888 346777899888888765 4434 78889999843
No 285
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=49.29 E-value=49 Score=31.29 Aligned_cols=84 Identities=20% Similarity=0.203 Sum_probs=47.8
Q ss_pred eEEEECCCC------CchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC--CcEEE
Q 021530 27 VVVFLHGFP------EIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI--NKVFL 98 (311)
Q Consensus 27 ~vvllHG~~------~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~l 98 (311)
.|+-+||.+ -+++.|...+.. +.+.-||.+|.-=--+...|..-. --+-.| -+++.=...+|. +|+++
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~--aL~cPiiSVdYSLAPEaPFPRale-Ev~fAY-cW~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQ--ALGCPIISVDYSLAPEAPFPRALE-EVFFAY-CWAINNCALLGSTGERIVL 473 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHH--HhCCCeEEeeeccCCCCCCCcHHH-HHHHHH-HHHhcCHHHhCcccceEEE
Confidence 478889875 233334443322 347999999964433332221100 011111 244444566675 78999
Q ss_pred EEeCcChHHHHHHHHh
Q 021530 99 VAKDFGARPAYLFALL 114 (311)
Q Consensus 99 vGhS~Gg~ia~~~a~~ 114 (311)
+|-|-||.+++.+|++
T Consensus 474 aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALR 489 (880)
T ss_pred eccCCCcceeehhHHH
Confidence 9999999877666554
No 286
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=49.11 E-value=41 Score=25.77 Aligned_cols=43 Identities=12% Similarity=0.055 Sum_probs=24.7
Q ss_pred cEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 53 FRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 53 ~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
-.||+.|.+|- .+|-.++|+.+.+..+.- -+=++++|-+.|=.
T Consensus 66 ~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~g-~~i~FvIGGa~G~~ 108 (153)
T TIGR00246 66 AHVVTLDIPGK----------PWTTPQLADTLEKWKTDG-RDVTLLIGGPEGLS 108 (153)
T ss_pred CeEEEEcCCCC----------cCCHHHHHHHHHHHhccC-CeEEEEEcCCCcCC
Confidence 46777777762 345556776666654332 23356666666543
No 287
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=48.47 E-value=30 Score=32.56 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEe------CcChHHHHHHHHhCCCceeeEEEecc
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAK------DFGARPAYLFALLHPERVSGVITLGV 127 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~ 127 (311)
+...+...+.+++.. .++|+++|| ++|+.|++..-+.--++ .+.+.+++
T Consensus 322 RaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 445556666666655 679999999 68999999765544444 66777764
No 288
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=48.40 E-value=1.3e+02 Score=27.96 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=61.4
Q ss_pred EEECCEEEE-EEecCC-CCceEEEECCCCCchhhhHHHHHHHHHCCc-EEEEeCCCCCCCCCCCCCCCcCcHHH-HHHHH
Q 021530 9 IKVQGLNLH-VAETGT-GPNVVVFLHGFPEIWYSWRHQMVAVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKD-ITNDL 84 (311)
Q Consensus 9 ~~~~g~~i~-y~~~G~-g~~~vvllHG~~~~~~~w~~~~~~l~~~~~-~vi~~Dl~G~G~S~~~~~~~~~~~~~-~a~dl 84 (311)
++-++-.+. |-.-|. .||-.|..-|+-. +..|.... ..-..+. -++.=|+|=-|.+=-. ... .+++ ..+-|
T Consensus 271 ~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaFYl-Gs~--eyE~~I~~~I 345 (511)
T TIGR03712 271 VDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAFYL-GSD--EYEQGIINVI 345 (511)
T ss_pred ecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeeccccccceeee-CcH--HHHHHHHHHH
Confidence 333344444 444563 3435788999865 55554321 1222232 4556688877765221 111 2333 34445
Q ss_pred HHHHHHhCCC--cEEEEEeCcChHHHHHHHHhC-C
Q 021530 85 LATLDHLGIN--KVFLVAKDFGARPAYLFALLH-P 116 (311)
Q Consensus 85 ~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~-p 116 (311)
.+-|+.||.+ +.+|-|-|||..=|+.|+++. |
T Consensus 346 ~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P 380 (511)
T TIGR03712 346 QEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP 380 (511)
T ss_pred HHHHHHhCCCHHHeeeccccccchhhhhhcccCCC
Confidence 5678889986 589999999999999999974 5
No 289
>PRK06824 translation initiation factor Sui1; Validated
Probab=47.90 E-value=1.1e+02 Score=22.37 Aligned_cols=74 Identities=18% Similarity=0.124 Sum_probs=50.1
Q ss_pred EEEEEEecC-CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Q 021530 14 LNLHVAETG-TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 14 ~~i~y~~~G-~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
++|++..-| .|. .|-.|-|++....+...++..|-.. -|+|-|-.... --=.-+..+.+.++|.+.|
T Consensus 43 vri~~~~kgr~gK-~VTvI~Gl~~~~~dlk~l~K~LKkk---------~gcGGtvkd~~--IeiQGD~r~~v~~~L~~~G 110 (118)
T PRK06824 43 VRVRRETKGRGGK-TVTVITGVPLAEDALKELAKELKRR---------CGTGGTLKDGV--IEIQGDHVELLLAELLKRG 110 (118)
T ss_pred EEEEEEEccCCCc-eEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCceEecCE--EEEcCcHHHHHHHHHHHCC
Confidence 467777777 455 8999999998888887777777553 48887754211 0111256778899999988
Q ss_pred CCcEEEEE
Q 021530 93 INKVFLVA 100 (311)
Q Consensus 93 ~~~~~lvG 100 (311)
.+ +-+.|
T Consensus 111 ~~-~k~~g 117 (118)
T PRK06824 111 FK-AKKAG 117 (118)
T ss_pred Ce-Eeecc
Confidence 73 44443
No 290
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=46.17 E-value=95 Score=23.08 Aligned_cols=8 Identities=50% Similarity=1.128 Sum_probs=6.7
Q ss_pred eEEEECCC
Q 021530 27 VVVFLHGF 34 (311)
Q Consensus 27 ~vvllHG~ 34 (311)
.|+|+||-
T Consensus 59 ~viFvHGC 66 (150)
T COG3727 59 CVIFVHGC 66 (150)
T ss_pred EEEEEeee
Confidence 68999994
No 291
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=46.12 E-value=29 Score=29.57 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=39.3
Q ss_pred cccceEEEeeCCcccCCCCCchhhh-------------------hcccccccC--CCeEEEEeCCCCCCccccChhHHHH
Q 021530 243 VKVPALLILGEKDYFLKFPGIEDYI-------------------RSGKVKDFV--PNLEIIRLSEGSHFVQEQSPEEVNQ 301 (311)
Q Consensus 243 i~~P~L~i~G~~D~~~~~~~~~~~~-------------------~~~~l~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~ 301 (311)
-++|+|++.|.+|.++-.+-..++. ..+-++... ....-+.+.+-||+.+-.+|+-+++
T Consensus 211 ~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~ 290 (297)
T PF06342_consen 211 KPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAE 290 (297)
T ss_pred CCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHH
Confidence 3589999999999886211111110 000011111 1233345566799999999999999
Q ss_pred HHHHHH
Q 021530 302 LVLTFL 307 (311)
Q Consensus 302 ~i~~Fl 307 (311)
.+..-+
T Consensus 291 ~i~~mf 296 (297)
T PF06342_consen 291 AIKKMF 296 (297)
T ss_pred HHHHhh
Confidence 988765
No 292
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=45.61 E-value=13 Score=29.09 Aligned_cols=44 Identities=11% Similarity=0.364 Sum_probs=31.6
Q ss_pred ccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCcc
Q 021530 242 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQ 292 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~ 292 (311)
++.-|.++|...+|++++.+.. +.+.+.. ++.++.+.++||+--
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a------~~~a~~w-gs~lv~~g~~GHiN~ 158 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHA------EDLANAW-GSALVDVGEGGHINA 158 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHH------HHHHHhc-cHhheecccccccch
Confidence 5678999999999999976432 2333333 468888888999753
No 293
>PRK09019 translation initiation factor Sui1; Validated
Probab=45.36 E-value=1.1e+02 Score=21.87 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=50.0
Q ss_pred EEEEEEecC-CCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Q 021530 14 LNLHVAETG-TGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 14 ~~i~y~~~G-~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
++|+....| .|. .|-+|-|++....+...++..|-.. -|+|-|-....- -=.-+..+.+.++|.+.|
T Consensus 33 vri~~~r~gRkGK-~VTiI~Gl~~~~~dlk~l~K~lKkk---------~gcGGtvk~~~I--elQGD~r~~v~~~L~~~G 100 (108)
T PRK09019 33 VRIQRQTSGRKGK-GVCLITGLDLDDAELKKLAAELKKK---------CGCGGAVKDGVI--EIQGDKRDLLKSLLEAKG 100 (108)
T ss_pred EEEEEecCCCCCC-eEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCCeEEcCEE--EEcCcHHHHHHHHHHHCC
Confidence 366666777 566 8999999998887777777777553 388888653210 111256778888998888
Q ss_pred CCcEEEEE
Q 021530 93 INKVFLVA 100 (311)
Q Consensus 93 ~~~~~lvG 100 (311)
. ++.++|
T Consensus 101 f-~~k~~g 107 (108)
T PRK09019 101 M-KVKLAG 107 (108)
T ss_pred C-eEEecc
Confidence 7 344544
No 294
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=45.01 E-value=1.2e+02 Score=24.72 Aligned_cols=58 Identities=21% Similarity=0.362 Sum_probs=34.5
Q ss_pred eEEEECCCCCchhh-hHHHHHHHHHCCc-EEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEE
Q 021530 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGF-RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~~~~~~l~~~~~-~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (311)
.|++.||...++.. +..+--.+.+.+| +|+.--.-||- ..+++++-|++.++++++|+
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCCceEEEe
Confidence 67888888665553 3332223334455 44444433431 14577888888899988876
No 295
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.92 E-value=10 Score=32.92 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCcee
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVS 120 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 120 (311)
+.+.+.+.|+.+-.+.|-|.|+.+|..++..-++.+.
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~ 122 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQ 122 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 4444555688777899999999999999875444433
No 296
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=44.70 E-value=36 Score=29.55 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=22.5
Q ss_pred HHHHHHH-hCCC---cE-EEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDH-LGIN---KV-FLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~-l~~~---~~-~lvGhS~Gg~ia~~~a~~~p 116 (311)
+++.+++ +|.. .+ .+.|.|.||.||..+|..++
T Consensus 17 vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 17 MLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred HHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCC
Confidence 3344444 5642 24 56799999999999997543
No 297
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.17 E-value=29 Score=29.23 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCcE-EEEEeCcChHHHHHHHHhCCCc
Q 021530 84 LLATLDHLGINKV-FLVAKDFGARPAYLFALLHPER 118 (311)
Q Consensus 84 l~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~ 118 (311)
+.+.+++.++.++ .++|-|.|+.+|..+++..+.+
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 4444555577634 8899999999999999986654
No 298
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=43.50 E-value=20 Score=32.32 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=33.9
Q ss_pred CccccceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 241 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 241 ~~i~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
.+.++|+|.|.|++|+++|.+.. ..+.....+.+...|+... +|.--| .-...+.+||++
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~------~lia~~s~~gk~~~~~~~~--~~~gy~-~al~~~~~Wl~~ 408 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDS------RLIAESSTDGKALRIPSKP--LHMGYP-QALDEIYKWLED 408 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHH------HHHHHTBTT-EEEEE-SSS--HHHHHH-HHHHHHHHHHHH
T ss_pred CCCCcceEEeecCCCCCCCHHHH------HHHHhcCCCCceeecCCCc--cccchH-HHHHHHHHHHHH
Confidence 46789999999999999875432 2344445567888887544 222223 444566777765
No 299
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=43.22 E-value=34 Score=28.05 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=26.3
Q ss_pred eEEEECCC-CCchhhhHHHHHHHHHCCcEEEEeC
Q 021530 27 VVVFLHGF-PEIWYSWRHQMVAVAAAGFRAIAPD 59 (311)
Q Consensus 27 ~vvllHG~-~~~~~~w~~~~~~l~~~~~~vi~~D 59 (311)
.||++|.. +.+......++..|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68999974 5566678888888888899988775
No 300
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=43.13 E-value=76 Score=28.73 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=35.9
Q ss_pred ceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCccccC-----hhHHHHHHHHHH
Q 021530 246 PALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQS-----PEEVNQLVLTFL 307 (311)
Q Consensus 246 P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~Fl 307 (311)
-+|+|.|++|++... . + .+.....++.+.+.||+.|...+.. -++....|.+|.
T Consensus 353 rmlFVYG~nDPW~A~-~---f----~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 353 RMLFVYGENDPWSAE-P---F----RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred eEEEEeCCCCCcccC-c---c----ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 479999999998732 1 1 1333345789999999999876543 234555666664
No 301
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=42.18 E-value=24 Score=29.47 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=24.4
Q ss_pred HHHHHHHhCCC---cE-EEEEeCcChHHHHHHHHhCCCce
Q 021530 84 LLATLDHLGIN---KV-FLVAKDFGARPAYLFALLHPERV 119 (311)
Q Consensus 84 l~~~l~~l~~~---~~-~lvGhS~Gg~ia~~~a~~~p~~v 119 (311)
+.+.+.+.|++ ++ .+.|-|.|+.+|..|+. .|+++
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc-ChHHH
Confidence 34444555653 34 79999999999999984 45543
No 302
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=41.71 E-value=71 Score=24.62 Aligned_cols=44 Identities=30% Similarity=0.376 Sum_probs=26.1
Q ss_pred CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-CcEEEEEeCcChH
Q 021530 52 GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDFGAR 106 (311)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ 106 (311)
+-.+|+.|.+|- .++-.++|+.+.+..+. |. +=+++||-+.|=.
T Consensus 67 ~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 67 GARVIALDERGK----------QLSSEEFAQELERWRDD-GRSDVAFVIGGADGLS 111 (157)
T ss_pred CCEEEEEcCCCC----------cCCHHHHHHHHHHHHhc-CCccEEEEEcCccccC
Confidence 346788887772 35666777777766332 33 3356677666633
No 303
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=41.28 E-value=38 Score=28.69 Aligned_cols=33 Identities=9% Similarity=0.156 Sum_probs=26.9
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPD 59 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~D 59 (311)
.|||+|-...+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 588999777777778888888888899988764
No 304
>PRK14974 cell division protein FtsY; Provisional
Probab=41.23 E-value=2.4e+02 Score=24.92 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=44.5
Q ss_pred HCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC--CceeeEEEe
Q 021530 50 AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHP--ERVSGVITL 125 (311)
Q Consensus 50 ~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~ 125 (311)
..++.+|.+|-+|...++ ..+.+.+..+.+.++.+.+++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 220 ~~~~DvVLIDTaGr~~~~----------~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHTD----------ANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccCCc----------HHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 346889999988765321 245566677777777777888888877776666555443 356777764
No 305
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=40.85 E-value=33 Score=28.36 Aligned_cols=33 Identities=21% Similarity=0.070 Sum_probs=25.4
Q ss_pred HHHHHHHhCCC--cEEEEEeCcChHHHHHHHHhCC
Q 021530 84 LLATLDHLGIN--KVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 84 l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
+.+.+.+.++. .-.+.|-|.|+.+|..|+...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 44455566775 3489999999999999999754
No 306
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=40.53 E-value=11 Score=34.15 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCceeeEE
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVI 123 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 123 (311)
+.+.+.+.|+.+=.+.|-|.|+.+|..+|..-++++..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444455578777899999999999999996666665553
No 307
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=40.40 E-value=37 Score=28.26 Aligned_cols=35 Identities=14% Similarity=0.025 Sum_probs=25.3
Q ss_pred HHHHHHHhCCC--c--EEEEEeCcChHHHHHHHHhCC-Cc
Q 021530 84 LLATLDHLGIN--K--VFLVAKDFGARPAYLFALLHP-ER 118 (311)
Q Consensus 84 l~~~l~~l~~~--~--~~lvGhS~Gg~ia~~~a~~~p-~~ 118 (311)
+.+.+.+.++. + -.+.|-|.|+.+|..+|...+ ++
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~ 56 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEE 56 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHH
Confidence 34444555654 2 389999999999999999764 44
No 308
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=40.22 E-value=1.7e+02 Score=24.54 Aligned_cols=73 Identities=23% Similarity=0.311 Sum_probs=38.2
Q ss_pred eEEEEC--CCCCch--------------hhhHHHHHHHHHCCc--EEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH
Q 021530 27 VVVFLH--GFPEIW--------------YSWRHQMVAVAAAGF--RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (311)
Q Consensus 27 ~vvllH--G~~~~~--------------~~w~~~~~~l~~~~~--~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l 88 (311)
++|++| |.|.+. ..+...+..+.+.|. .=+.+|. |+|.+... ..++. .-+.+..+
T Consensus 120 ~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~iilDP-g~gf~ks~----~~~~~-~l~~i~~l- 192 (257)
T TIGR01496 120 PLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAGVAAERIILDP-GIGFGKTP----EHNLE-LLKHLEEF- 192 (257)
T ss_pred cEEEEeCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEEC-CCCcccCH----HHHHH-HHHHHHHH-
Confidence 677788 655552 123444555555566 4578887 88865311 11111 12222222
Q ss_pred HHhCCCcEEEEEeCcChHHH
Q 021530 89 DHLGINKVFLVAKDFGARPA 108 (311)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~ia 108 (311)
.+++ ...++|.|-=+.++
T Consensus 193 ~~~~--~p~l~G~SrkSfig 210 (257)
T TIGR01496 193 VALG--YPLLVGASRKSFIG 210 (257)
T ss_pred HhCC--CcEEEEecccHHHH
Confidence 2233 46889998655554
No 309
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.97 E-value=1.5e+02 Score=23.72 Aligned_cols=72 Identities=18% Similarity=0.183 Sum_probs=48.2
Q ss_pred HHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC--Cceee
Q 021530 44 QMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHP--ERVSG 121 (311)
Q Consensus 44 ~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~ 121 (311)
.+..+..+++.+|.+|-+|... .-.+..+.+.++++......++||=-+..+.-.+..+..+- -.+.+
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~ 144 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDG 144 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCE
T ss_pred HHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCce
Confidence 3444445679999999988642 22356677888888887777888877777776665444332 24688
Q ss_pred EEEe
Q 021530 122 VITL 125 (311)
Q Consensus 122 lvl~ 125 (311)
+|+.
T Consensus 145 lIlT 148 (196)
T PF00448_consen 145 LILT 148 (196)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 310
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=38.77 E-value=1.1e+02 Score=27.20 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=44.0
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEE
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (311)
+||.+.|.-+|+-. +-.|.+.||.|+.+-+.-+..+ .....+..+-..|..++++.||+. +.++
T Consensus 6 V~v~mSGGVDSSVa----A~lLk~QGyeViGl~m~~~~~~----~~~~C~s~~d~~da~~va~~LGIp-~~~v 69 (356)
T COG0482 6 VLVGMSGGVDSSVA----AYLLKEQGYEVIGLFMKNWDED----GGGGCCSEEDLRDAERVADQLGIP-LYVV 69 (356)
T ss_pred EEEEccCCHHHHHH----HHHHHHcCCeEEEEEEEeeccC----CCCcCCchhHHHHHHHHHHHhCCc-eEEE
Confidence 78888888777532 2234456999999888777652 112355566778899999999983 4554
No 311
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=37.42 E-value=53 Score=29.91 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=24.5
Q ss_pred ceEEEeeCCcccCCCCCchhhhhcccccccCCCeEEEEeCCCCCCcccc
Q 021530 246 PALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ 294 (311)
Q Consensus 246 P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~~e 294 (311)
-++++.|+.|++.... + .....+.....+|+|++|+.-+-
T Consensus 378 nviFtNG~~DPW~~lg-v--------~~~~~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 378 NVIFTNGELDPWRALG-V--------TSDSSDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp SEEEEEETT-CCGGGS-----------S-SSSSEEEEEETT--TTGGGS
T ss_pred eEEeeCCCCCCccccc-C--------CCCCCCCcccEEECCCeeecccc
Confidence 4799999999987432 1 11233456778999999987543
No 312
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=36.12 E-value=82 Score=27.02 Aligned_cols=41 Identities=27% Similarity=0.311 Sum_probs=26.0
Q ss_pred CcEEEEeCCCCCCCCCCCCCC-CcCc----HHHHHHHHHHHHHHhCC
Q 021530 52 GFRAIAPDYRGYGLSDPPAEP-EKAS----FKDITNDLLATLDHLGI 93 (311)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~~~~-~~~~----~~~~a~dl~~~l~~l~~ 93 (311)
+-++|++| ||||..++-... .... ..++|..+.+.|++.|+
T Consensus 55 ~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 45799999 899988753211 1111 23456677777777766
No 313
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=35.92 E-value=49 Score=27.84 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=39.3
Q ss_pred cccceEEEeeC------CcccCCCCCchhhhhcccccccCCCeEEEEeCC--CCCCccccChhHHHHHHHHHHh
Q 021530 243 VKVPALLILGE------KDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSE--GSHFVQEQSPEEVNQLVLTFLN 308 (311)
Q Consensus 243 i~~P~L~i~G~------~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~--~gH~~~~e~p~~~~~~i~~Fl~ 308 (311)
-++.+|-|.|. .|..+|....... ...+.......+-.++.| +.|.-..|+| ++.+.|.+||=
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl--~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSL--RYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTH--HHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHH--HHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 46779999998 6777754322111 011333344567777755 6898888876 56688999984
No 314
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=34.70 E-value=66 Score=20.25 Aligned_cols=34 Identities=29% Similarity=0.553 Sum_probs=27.4
Q ss_pred cCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 275 FVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 275 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
..|+ ++..+-++.++.-.|.++++.+.|.+|-++
T Consensus 24 ~~PD-TvItL~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 24 ETPD-TVITLTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EcCC-eEEEEeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 4677 555555678899999999999999999764
No 315
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=33.13 E-value=94 Score=24.61 Aligned_cols=44 Identities=25% Similarity=0.205 Sum_probs=25.8
Q ss_pred EEEEeCCCCCCCCCCCCCCCc-C----cHHHHHHHHHHHHHHhCCCcEEEE
Q 021530 54 RAIAPDYRGYGLSDPPAEPEK-A----SFKDITNDLLATLDHLGINKVFLV 99 (311)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~~~-~----~~~~~a~dl~~~l~~l~~~~~~lv 99 (311)
++|++| ||||.+++-..... . =..+++..+.+.|++.|. ++.+.
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~-~V~lt 49 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA-LVVMT 49 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC-EEEEE
Confidence 468888 89998875321100 1 112456677777888776 34433
No 316
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=32.75 E-value=28 Score=29.30 Aligned_cols=15 Identities=13% Similarity=0.479 Sum_probs=12.7
Q ss_pred CCCcEEEEEeCcChH
Q 021530 92 GINKVFLVAKDFGAR 106 (311)
Q Consensus 92 ~~~~~~lvGhS~Gg~ 106 (311)
.++.+.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999974
No 317
>PRK05309 30S ribosomal protein S11; Validated
Probab=32.67 E-value=2e+02 Score=21.28 Aligned_cols=50 Identities=12% Similarity=0.050 Sum_probs=36.2
Q ss_pred CcCcHHHHHHHHHHHHHHhCCCcEEEE--EeCcChHHHHHHHHhCCCceeeE
Q 021530 73 EKASFKDITNDLLATLDHLGINKVFLV--AKDFGARPAYLFALLHPERVSGV 122 (311)
Q Consensus 73 ~~~~~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~l 122 (311)
..|.....++.+.+.+.++|++.+.|+ |...|...++..-....-.|.++
T Consensus 58 T~~Aa~~aa~~~~~~~~~~gi~~v~v~ikG~G~Gr~~air~L~~~glkI~~I 109 (128)
T PRK05309 58 TPYAAQVAAEDAAKKAKEHGMKTVEVFVKGPGSGRESAIRALQAAGLEVTSI 109 (128)
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEE
Confidence 457788889999999999999987666 77777777776655544334433
No 318
>PRK13753 dihydropteroate synthase; Provisional
Probab=32.58 E-value=1.4e+02 Score=25.45 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=32.1
Q ss_pred HHHHCCc--EEEEeCCCCCCCCC-CCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHH
Q 021530 47 AVAAAGF--RAIAPDYRGYGLSD-PPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLF 111 (311)
Q Consensus 47 ~l~~~~~--~vi~~Dl~G~G~S~-~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 111 (311)
.+.+.|. .=|++| ||+|... +.. ..++. +...+.+|...+| ...|+|+|-=+.+.-.+
T Consensus 159 ~~~~~Gi~~~~IilD-PGiGF~k~k~~---~~n~~-ll~~l~~l~~~~g--~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 159 ALRRSGVAADRLILD-PGMGFFLSPAP---ETSLH-VLSNLQKLKSALG--LPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHHcCCChhhEEEe-CCCCCCCCCCh---HHHHH-HHHhHHHHHHhCC--CceEEEccHhHHHHHHc
Confidence 3444444 358889 6999742 111 11222 2333333433344 57999999998887444
No 319
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.42 E-value=3e+02 Score=24.44 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=64.9
Q ss_pred eEEEECCCCCchhhhHHHHH-HHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC--CcEEEEEeCc
Q 021530 27 VVVFLHGFPEIWYSWRHQMV-AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI--NKVFLVAKDF 103 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~-~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~lvGhS~ 103 (311)
+||++=||.+.-.-|..... -..++||.++.+-.|-+=..-.. .....+......-|.+++...+. .+..+--.|+
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~-s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ 118 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSA-SRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSG 118 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccc-ccccchhhHHHHHHHHHhhhccCCcCceEEEEecC
Confidence 78888899887776654332 33455899999998887554322 22334566666778888888773 4566668899
Q ss_pred ChHHHHHHH---H-hC-C---CceeeEEEeccC
Q 021530 104 GARPAYLFA---L-LH-P---ERVSGVITLGVP 128 (311)
Q Consensus 104 Gg~ia~~~a---~-~~-p---~~v~~lvl~~~~ 128 (311)
||...+..- . ++ | +.+.++++.++|
T Consensus 119 ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p 151 (350)
T KOG2521|consen 119 NGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAP 151 (350)
T ss_pred CceeehHHHHHHHhhcCchhHhhcCCceEeccc
Confidence 998876532 2 22 3 345566665554
No 320
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=32.41 E-value=87 Score=24.14 Aligned_cols=44 Identities=32% Similarity=0.298 Sum_probs=24.9
Q ss_pred EEeCCCCCCCCCCCCCCC-cCc----HHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 56 IAPDYRGYGLSDPPAEPE-KAS----FKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 56 i~~Dl~G~G~S~~~~~~~-~~~----~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
|++| +|||.+++-.... .+. ..+++..+.+.|++.|+ ++.+.--
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~~l~~~L~~~G~-~v~~~r~ 50 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIALKLAKLLEAAGA-KVVLTRD 50 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHCCC-EEEEEec
Confidence 4555 7999987532211 122 33466677777777776 3444433
No 321
>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=32.16 E-value=1.5e+02 Score=23.42 Aligned_cols=53 Identities=19% Similarity=0.348 Sum_probs=39.1
Q ss_pred EEEEecCCCCceEEEECCCCCchhhhHHHHH-HHHHCCcEEEEeCCCCCCCCCCC
Q 021530 16 LHVAETGTGPNVVVFLHGFPEIWYSWRHQMV-AVAAAGFRAIAPDYRGYGLSDPP 69 (311)
Q Consensus 16 i~y~~~G~g~~~vvllHG~~~~~~~w~~~~~-~l~~~~~~vi~~Dl~G~G~S~~~ 69 (311)
..+..+..+. |+.|-=|-+.--.-|+.-+. ....+..+|+.|-..|||.+..+
T Consensus 104 ~fdSS~~rg~-P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~IPp~LgYG~~G~~ 157 (188)
T KOG0549|consen 104 KFDSSYSRGA-PFTFTLGTGQVIKGWDQGLLGMCVGEKRKLIIPPHLGYGERGAP 157 (188)
T ss_pred EEeeeccCCC-CEEEEeCCCceeccHhHHhhhhCcccceEEecCccccCccCCCC
Confidence 4444444555 79999999988888986433 33344689999999999999854
No 322
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=31.97 E-value=3.7e+02 Score=23.90 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=28.5
Q ss_pred EEEECC-CCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCC
Q 021530 28 VVFLHG-FPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSD 67 (311)
Q Consensus 28 vvllHG-~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~ 67 (311)
|||+|+ +|+- |+.++..|.+.|+.|.++-+.+.+...
T Consensus 2 il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCchh---HHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788986 5654 677888998889999988777776543
No 323
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.84 E-value=41 Score=28.96 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCce
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFALLHPERV 119 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 119 (311)
+.+.+.+.++.+-.+.|-|.|+.+|..++..-.+++
T Consensus 87 vl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 87 VVKALWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 333334457777789999999999999998654444
No 324
>CHL00041 rps11 ribosomal protein S11
Probab=31.76 E-value=2e+02 Score=20.83 Aligned_cols=50 Identities=10% Similarity=0.127 Sum_probs=35.9
Q ss_pred CcCcHHHHHHHHHHHHHHhCCCcEEEE--EeCcChHHHHHHHHhCCCceeeE
Q 021530 73 EKASFKDITNDLLATLDHLGINKVFLV--AKDFGARPAYLFALLHPERVSGV 122 (311)
Q Consensus 73 ~~~~~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~l 122 (311)
..|.....++.+.+.+.++|++.++++ |...|-..++..-....-.|.++
T Consensus 54 T~~Aa~~~a~~~~~~~~~~gi~~v~I~ikG~G~Gr~~~ir~l~~~glkI~~I 105 (116)
T CHL00041 54 TPFAAQTAAENAIRTVIDQGMKRAEVMIKGPGLGRDTALRAIRRSGLKLSSI 105 (116)
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEE
Confidence 357888889999999999999987666 66667777766555444344444
No 325
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=31.67 E-value=45 Score=28.98 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=21.5
Q ss_pred HHHHHhC--CCcEEEEEeCcChHHHHHHHH
Q 021530 86 ATLDHLG--INKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 86 ~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
+.+.+.+ .++..+.|||+|=+.|+..+.
T Consensus 75 ~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 75 RVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 4444544 777899999999998887766
No 326
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=31.33 E-value=56 Score=27.27 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=17.8
Q ss_pred EEEEeCcChHHHHHHHHhCC
Q 021530 97 FLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 97 ~lvGhS~Gg~ia~~~a~~~p 116 (311)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998754
No 327
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=31.24 E-value=3.2e+02 Score=25.03 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=47.1
Q ss_pred HHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC--ceeeEEE
Q 021530 47 AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVIT 124 (311)
Q Consensus 47 ~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 124 (311)
.+...+|.+|.+|-+|.-.. -..+.+.+.++.+......+.||--++-|.-+...|..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 33345799999999984221 12455667777777777778899888888777666665533 4778887
Q ss_pred e
Q 021530 125 L 125 (311)
Q Consensus 125 ~ 125 (311)
.
T Consensus 247 T 247 (429)
T TIGR01425 247 T 247 (429)
T ss_pred E
Confidence 4
No 328
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.84 E-value=66 Score=26.97 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=18.4
Q ss_pred EEEEEeCcChHHHHHHHHhCC
Q 021530 96 VFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 96 ~~lvGhS~Gg~ia~~~a~~~p 116 (311)
-.++|-|.|+.++..|+...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 469999999999999998765
No 329
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=29.06 E-value=1.9e+02 Score=26.96 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=54.2
Q ss_pred eEEEECCCCCchhh-hHHHHHHHHHCCcEEEEeCCCCCCCCCCC--------C---------------CCCcCcHHHHHH
Q 021530 27 VVVFLHGFPEIWYS-WRHQMVAVAAAGFRAIAPDYRGYGLSDPP--------A---------------EPEKASFKDITN 82 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--------~---------------~~~~~~~~~~a~ 82 (311)
-++.+-|++-.... -.+..+.|...+.+.+.+|+++-|.-.+. . .-...+-++.-+
T Consensus 98 Kkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIEe 177 (831)
T PRK15180 98 KKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQ 177 (831)
T ss_pred eeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHHH
Confidence 58889998876654 33344566666788899999999876541 0 011235556777
Q ss_pred HHHHHHHHhCCCcEEEEEeC
Q 021530 83 DLLATLDHLGINKVFLVAKD 102 (311)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS 102 (311)
||.++..-||-++|.+|-|-
T Consensus 178 DmmeIVqLLGk~rVvfVTHV 197 (831)
T PRK15180 178 DMMEIVQLLGRDRVMFMTHV 197 (831)
T ss_pred HHHHHHHHhCCCcEEEEEee
Confidence 89999999999999999884
No 330
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=29.04 E-value=1.3e+02 Score=20.29 Aligned_cols=33 Identities=12% Similarity=-0.086 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCcEEEEEeCcChHHHHHH-HHhC
Q 021530 83 DLLATLDHLGINKVFLVAKDFGARPAYLF-ALLH 115 (311)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~-a~~~ 115 (311)
.+..+-++||...+++.|-+-...+|..+ .++|
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeADy 65 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVEADY 65 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHHhhh
Confidence 34444577899999999999999999865 4455
No 331
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=28.47 E-value=96 Score=21.39 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=17.3
Q ss_pred EEEC-CEEEEEEecCCCCceEEEECCCCC
Q 021530 9 IKVQ-GLNLHVAETGTGPNVVVFLHGFPE 36 (311)
Q Consensus 9 ~~~~-g~~i~y~~~G~g~~~vvllHG~~~ 36 (311)
+.++ ++++.|...+ +. .+|++|||--
T Consensus 52 ~r~g~~yRiif~~~~-~~-~vvll~gf~K 78 (95)
T TIGR02683 52 IDFGPGYRVYFTQRG-KV-IILLLCGGDK 78 (95)
T ss_pred ecCCCCEEEEEEEEC-CE-EEEEEeCEec
Confidence 3444 6777777664 33 7889999853
No 332
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.42 E-value=59 Score=28.06 Aligned_cols=51 Identities=24% Similarity=0.280 Sum_probs=30.5
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC---cE-EEEEeCcChHHHHHHHH
Q 021530 51 AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN---KV-FLVAKDFGARPAYLFAL 113 (311)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~---~~-~lvGhS~Gg~ia~~~a~ 113 (311)
++++++++| |=|-- .+- .+.-|.++.+.++.. .+ .+.|.|.||.||..++.
T Consensus 6 ~~~riLsLd--GGGir---------G~~-~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 6 RGIRILSID--GGGTR---------GVV-ALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCcEEEEEC--CChHH---------HHH-HHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 367888888 53211 111 233344454544432 23 47799999999999986
No 333
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=28.13 E-value=41 Score=27.05 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=18.2
Q ss_pred cccceEEEeeCCcccCCCCCchhh
Q 021530 243 VKVPALLILGEKDYFLKFPGIEDY 266 (311)
Q Consensus 243 i~~P~L~i~G~~D~~~~~~~~~~~ 266 (311)
...|+++++|++|.++++......
T Consensus 167 ~~p~~~i~hG~~D~vVp~~~~~~~ 190 (212)
T TIGR01840 167 PTPIMSVVHGDADYTVLPGNADEI 190 (212)
T ss_pred CCCeEEEEEcCCCceeCcchHHHH
Confidence 345578999999999987665543
No 334
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.92 E-value=81 Score=26.48 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=42.9
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCC--eEEEEeCCCCCCccccChhHHHHHHHHHH
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN--LEIIRLSEGSHFVQEQSPEEVNQLVLTFL 307 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 307 (311)
.+-+-+..|..|.++|.+ + ...+++.+|. +++.+ +++-|..-..+.|..+..+.+.+
T Consensus 242 ~d~l~Fyygt~DgW~p~~----~--~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSH----Y--YDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchH----H--HHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 355678899999999742 2 2346677774 77777 88999999999998888776654
No 335
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=27.89 E-value=1.2e+02 Score=21.53 Aligned_cols=61 Identities=25% Similarity=0.236 Sum_probs=35.9
Q ss_pred EEEECCCCCchhhhHHHHHHHHHC-CcEEEEeCC--CCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh
Q 021530 28 VVFLHGFPEIWYSWRHQMVAVAAA-GFRAIAPDY--RGYGLSDPPAEPEKASFKDITNDLLATLDHL 91 (311)
Q Consensus 28 vvllHG~~~~~~~w~~~~~~l~~~-~~~vi~~Dl--~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l 91 (311)
||+|.|.+++..+- ++..|.+. ++.++-.|- +-.+...... ..........+.+.+.++.+
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDD-DEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCc-chhhHHHHHHHHHHHHHHhh
Confidence 68899999888754 44555554 799888887 5555543221 11111334445555566655
No 336
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=27.81 E-value=3.7e+02 Score=23.60 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHHHHHhC-CCcEEEEEeCcChHH
Q 021530 76 SFKDITNDLLATLDHLG-INKVFLVAKDFGARP 107 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~-~~~~~lvGhS~Gg~i 107 (311)
+..+.++.+.+.++... ..+++||=|++=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 56677777777777775 568999999988766
No 337
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=27.80 E-value=41 Score=28.37 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=14.2
Q ss_pred CccccceEEEeeCCcccCC
Q 021530 241 LTVKVPALLILGEKDYFLK 259 (311)
Q Consensus 241 ~~i~~P~L~i~G~~D~~~~ 259 (311)
.++++|+|++.|-.|..+.
T Consensus 225 ~~i~vP~l~v~Gw~D~~~~ 243 (272)
T PF02129_consen 225 DKIDVPVLIVGGWYDTLFL 243 (272)
T ss_dssp GG--SEEEEEEETTCSSTS
T ss_pred hhCCCCEEEecccCCcccc
Confidence 3789999999999995554
No 338
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=27.79 E-value=1e+02 Score=25.73 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=13.6
Q ss_pred CcEEEEeCCCCCCCCC
Q 021530 52 GFRAIAPDYRGYGLSD 67 (311)
Q Consensus 52 ~~~vi~~Dl~G~G~S~ 67 (311)
+..+..+|.||++.+.
T Consensus 78 g~~i~vIDTPGl~~~~ 93 (249)
T cd01853 78 GFKLNIIDTPGLLESV 93 (249)
T ss_pred CeEEEEEECCCcCcch
Confidence 5788999999999773
No 339
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=27.61 E-value=2.2e+02 Score=24.48 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh-CCC---ceeeEEEeccCC
Q 021530 78 KDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPF 129 (311)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvl~~~~~ 129 (311)
..-++.+.+.+.+.. ++++|+ +.|-..-++.|.+ +|+ ++++++++++.+
T Consensus 99 ~~a~~~i~~~~~~~~-~evtiv--a~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 151 (302)
T cd02651 99 IHAVDAIIDTLRASP-EPITLV--ATGPLTNIALLLRKYPELAERIKEIVLMGGAL 151 (302)
T ss_pred CcHHHHHHHHHHhCC-CCEEEE--EcCchHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 345666777776654 478888 7888887777774 786 899999988654
No 340
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.19 E-value=77 Score=26.55 Aligned_cols=21 Identities=14% Similarity=-0.121 Sum_probs=18.3
Q ss_pred EEEEEeCcChHHHHHHHHhCC
Q 021530 96 VFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 96 ~~lvGhS~Gg~ia~~~a~~~p 116 (311)
-.+.|-|.|+.+|..|++..+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468999999999999998764
No 341
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=26.83 E-value=71 Score=19.10 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=23.4
Q ss_pred cCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 021530 74 KASFKDITNDLLATLDHLGINKVFLVAK 101 (311)
Q Consensus 74 ~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (311)
.++-..+..|+...+..+.|.++.++|-
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 3566688999999999999999998873
No 342
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=26.59 E-value=1.5e+02 Score=19.70 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=30.3
Q ss_pred cCcHHHHHHHHHHHHHH----hCCCcEEEEEeCcChHHHHHHHHhCC
Q 021530 74 KASFKDITNDLLATLDH----LGINKVFLVAKDFGARPAYLFALLHP 116 (311)
Q Consensus 74 ~~~~~~~a~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p 116 (311)
...-...+++.++.++. -|.+++-++|-|-|=..|.+.++.+-
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 34555666666666666 45689999999999999988888763
No 343
>TIGR03632 bact_S11 30S ribosomal protein S11. This model describes the bacterial 30S ribosomal protein S11. Cutoffs are set such that the model excludes archaeal and eukaryotic ribosomal proteins, but many chloroplast and mitochondrial equivalents of S11 are detected.
Probab=26.47 E-value=2.4e+02 Score=20.08 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=35.5
Q ss_pred CcCcHHHHHHHHHHHHHHhCCCcEEEE--EeCcChHHHHHHHHhCCCceeeE
Q 021530 73 EKASFKDITNDLLATLDHLGINKVFLV--AKDFGARPAYLFALLHPERVSGV 122 (311)
Q Consensus 73 ~~~~~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~l 122 (311)
..|.....++.+.+.+.++|++.+.+. |..-|-..++..-....-.|.++
T Consensus 41 t~~Aa~~~a~~~~~~~~~~gi~~v~v~~kG~G~gr~~~ir~l~~~glkI~~I 92 (108)
T TIGR03632 41 TPYAAQLAAEDAAKKAKEFGMKTVDVYVKGPGAGRESAIRALQAAGLEVTSI 92 (108)
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEE
Confidence 357788889999999999999987666 66667766666555544344443
No 344
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=26.40 E-value=80 Score=24.05 Aligned_cols=29 Identities=24% Similarity=0.286 Sum_probs=21.1
Q ss_pred HHHHHHHhCC--CcEEEEEeCcChHHHHHHH
Q 021530 84 LLATLDHLGI--NKVFLVAKDFGARPAYLFA 112 (311)
Q Consensus 84 l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a 112 (311)
+.+.+++.++ .--.+.|.|-|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344445555 4457889999999999988
No 345
>PRK04940 hypothetical protein; Provisional
Probab=26.22 E-value=1.1e+02 Score=24.18 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=34.7
Q ss_pred eEEEeeCCcccCCCCCchhhhhcccccccCCCe-EEEEeCCCCCCc-cccChhHHHHHHHHHHhh
Q 021530 247 ALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL-EIIRLSEGSHFV-QEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 247 ~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~-~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~~ 309 (311)
.+++..+.|.+.... ...+.+.++ +..+.+|+.|.+ .+ ++....|.+|+.+
T Consensus 127 ~~vllq~gDEvLDyr---------~a~~~y~~~y~~~v~~GGdH~f~~f---e~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQ---------RTAEELHPYYEIVWDEEQTHKFKNI---SPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHH---------HHHHHhccCceEEEECCCCCCCCCH---HHHHHHHHHHHhc
Confidence 488889999987532 223345666 888888888854 33 4577778888753
No 346
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=26.11 E-value=50 Score=28.31 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=44.3
Q ss_pred ccceEEEeeCCcccCCCCCchhhhhcccccccCCC--eEEEEeCCCCCCccccC---hhHHHHHHHHHHhh
Q 021530 244 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN--LEIIRLSEGSHFVQEQS---PEEVNQLVLTFLNK 309 (311)
Q Consensus 244 ~~P~L~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~gH~~~~e~---p~~~~~~i~~Fl~~ 309 (311)
+|-.+-|-|++|.+...- +-..+..+...+|. -+.+.-+++||+--+.- -+++.-.|.+|+.+
T Consensus 339 ~~aL~tvEGEnDDIsgvG---QTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~ 406 (415)
T COG4553 339 NVALFTVEGENDDISGVG---QTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRR 406 (415)
T ss_pred ceeEEEeecccccccccc---hhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHH
Confidence 567888999999987532 22223456666664 45667789999876653 36788888999865
No 347
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=26.04 E-value=4e+02 Score=22.41 Aligned_cols=74 Identities=23% Similarity=0.319 Sum_probs=39.1
Q ss_pred eEEEEC--CCCCch--------------hhhHHHHHHHHHCCcE--EEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH
Q 021530 27 VVVFLH--GFPEIW--------------YSWRHQMVAVAAAGFR--AIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (311)
Q Consensus 27 ~vvllH--G~~~~~--------------~~w~~~~~~l~~~~~~--vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l 88 (311)
++|++| |.|.+. ..+...+..+.+.|.. =|.+|+ |+|.+... ..++ +..+.+.. +
T Consensus 122 ~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~Ii~DP-g~gf~ks~----~~~~-~~l~~i~~-l 194 (257)
T cd00739 122 PLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAESAGVARNRIILDP-GIGFGKTP----EHNL-ELLRRLDE-L 194 (257)
T ss_pred CEEEECCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEec-CCCcccCH----HHHH-HHHHHHHH-H
Confidence 677788 555441 1233444555556664 678885 76654321 1121 11222222 2
Q ss_pred HHhCCCcEEEEEeCcChHHHH
Q 021530 89 DHLGINKVFLVAKDFGARPAY 109 (311)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~ia~ 109 (311)
+++ +-..++|.|-=+.++-
T Consensus 195 ~~~--~~pil~G~SrkSfig~ 213 (257)
T cd00739 195 KQL--GLPVLVGASRKSFIGA 213 (257)
T ss_pred HhC--CCcEEEEecccHHHHH
Confidence 233 4468999988777763
No 348
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=25.81 E-value=4.2e+02 Score=24.33 Aligned_cols=69 Identities=22% Similarity=0.282 Sum_probs=44.9
Q ss_pred HHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC--ceeeEEE
Q 021530 47 AVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPE--RVSGVIT 124 (311)
Q Consensus 47 ~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 124 (311)
.+...+|.+|.+|-+|....+ +.+.+.+.++.+.+..+.+++|--++-|.-+...|..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIl 246 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVL 246 (428)
T ss_pred HHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEE
Confidence 333457999999999965321 1355566666666667777788777766666666655432 4677776
Q ss_pred e
Q 021530 125 L 125 (311)
Q Consensus 125 ~ 125 (311)
.
T Consensus 247 T 247 (428)
T TIGR00959 247 T 247 (428)
T ss_pred e
Confidence 4
No 349
>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic. This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.
Probab=25.71 E-value=2.4e+02 Score=19.83 Aligned_cols=73 Identities=15% Similarity=0.168 Sum_probs=45.5
Q ss_pred EEEEEEecCC-CCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Q 021530 14 LNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLG 92 (311)
Q Consensus 14 ~~i~y~~~G~-g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (311)
++|+...-|. |. .|-.|.|++........++..|... -|+|-|-... .-.=.-++.+.+.++|.++|
T Consensus 26 i~i~~e~rgr~gK-~VTvV~Gl~~~~~~l~~l~k~LKk~---------~gcGgtvk~~--~IeiQGD~~~~v~~~L~~~G 93 (101)
T TIGR01158 26 VRIQRETRGRKGK-GVTIIEGLDLSDIDLKELAKELKSK---------CGCGGTVKDG--VIEIQGDHRDRVKDLLEKKG 93 (101)
T ss_pred EEEEEEEecCCCC-EEEEEeCCcCchhhHHHHHHHHHHH---------hcCCeeEeCC--EEEEeCcHHHHHHHHHHHcC
Confidence 3566666764 45 8999999987766666666666442 2666664321 10011367888889998888
Q ss_pred CCcEEEE
Q 021530 93 INKVFLV 99 (311)
Q Consensus 93 ~~~~~lv 99 (311)
+. +..+
T Consensus 94 ~~-~k~~ 99 (101)
T TIGR01158 94 FK-VKLI 99 (101)
T ss_pred CC-eeec
Confidence 73 4443
No 350
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=25.13 E-value=53 Score=19.19 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=21.3
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Q 021530 51 AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLD 89 (311)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~ 89 (311)
.+|.+.+||+||+--. .-|+++..+.+.+.+.
T Consensus 12 ~~y~~~~pdlpg~~t~-------G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQ-------GDTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEEE-------ESSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhc-------CCCHHHHHHHHHHHHH
Confidence 4699999999987522 2366666665555543
No 351
>PRK05481 lipoyl synthase; Provisional
Probab=25.10 E-value=2.1e+02 Score=24.60 Aligned_cols=56 Identities=11% Similarity=0.065 Sum_probs=30.8
Q ss_pred chhhhHHHHHHHHHC--CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 021530 37 IWYSWRHQMVAVAAA--GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDF 103 (311)
Q Consensus 37 ~~~~w~~~~~~l~~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (311)
+...|...+..+.+. +..+-+-=+-|||+|. +-..+...++++++++.+++.-+|-
T Consensus 178 t~e~~le~i~~ar~~~pgi~~~t~~IvGfGET~-----------ed~~~tl~~lrel~~d~v~if~Ys~ 235 (289)
T PRK05481 178 DYERSLELLKRAKELHPGIPTKSGLMVGLGETD-----------EEVLEVMDDLRAAGVDILTIGQYLQ 235 (289)
T ss_pred CHHHHHHHHHHHHHhCCCCeEeeeeEEECCCCH-----------HHHHHHHHHHHhcCCCEEEEEccCC
Confidence 444555555554444 5555555555666552 1233455566667777777766655
No 352
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=24.57 E-value=1.9e+02 Score=24.23 Aligned_cols=46 Identities=28% Similarity=0.333 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCcChH-HH-HHHHHhCCCceeeEEEec
Q 021530 81 TNDLLATLDHLGINKVFLVAKDFGAR-PA-YLFALLHPERVSGVITLG 126 (311)
Q Consensus 81 a~dl~~~l~~l~~~~~~lvGhS~Gg~-ia-~~~a~~~p~~v~~lvl~~ 126 (311)
.+++.+.|+..|+++.+++.-|..+. -. +.-+...++++.+++.++
T Consensus 30 ~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~~~~r~~g~~~~~ 77 (263)
T cd01311 30 IDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALASNGKARGGATVD 77 (263)
T ss_pred HHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHhhCCCeEEEEEEC
Confidence 66788888899999999988654222 11 122223568888888765
No 353
>PF15566 Imm18: Immunity protein 18
Probab=24.41 E-value=1.1e+02 Score=18.65 Aligned_cols=31 Identities=13% Similarity=0.277 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 021530 76 SFKDITNDLLATLDHLGINKVFLVAKDFGAR 106 (311)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 106 (311)
.+.-++++|..+.....-+..+++=-||||.
T Consensus 3 gL~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 3 GLELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred hHHHHHHHHHHHHhccCCCCceecccccccc
Confidence 3556777888887776667789999999986
No 354
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=24.31 E-value=5.5e+02 Score=23.41 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=25.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYG 64 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G 64 (311)
+-|++||.|...... ..+..+.+.|..||+-|+..++
T Consensus 268 ~Ril~~G~P~~~~~~-~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 268 YRLVVEGPPNWTNFR-EFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred eEEEEECCCcchhHH-HHHHHHHHCCCEEEEEeccccc
Confidence 799999998775421 2222334568999999877664
No 355
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=24.22 E-value=1.4e+02 Score=18.97 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=28.9
Q ss_pred ccCCCeEEEEeCCCCCCccccChhHHHHHHHHHHhh
Q 021530 274 DFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 309 (311)
Q Consensus 274 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 309 (311)
+.+|+.++..+. +.-+.--|.-|++.+.|.+|-++
T Consensus 23 e~~PDttItLin-GkkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 23 EAFPDTTITLIN-GKKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred hccCCcEEEEEc-CcEEEEcccHHHHHHHHHHHHHH
Confidence 357888888884 57788889999999999998764
No 356
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=24.13 E-value=2.5e+02 Score=21.83 Aligned_cols=52 Identities=13% Similarity=0.083 Sum_probs=37.5
Q ss_pred EEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeC-cChHHHHHHHHhC
Q 021530 54 RAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKD-FGARPAYLFALLH 115 (311)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS-~Gg~ia~~~a~~~ 115 (311)
+|+..+-+.+ ..|+.+.+++-+.+++++.+. .++|+|++ .|+.++-++|.+.
T Consensus 62 ~v~~~~~~~~---------~~~~~~~~a~~l~~~i~~~~p-~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 62 KVLLVEDPAL---------AGYDPEATAKALAALIKKEKP-DLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred EEEEEecCcc---------cCCChHHHHHHHHHHHHHhCC-CEEEECCcccccCHHHHHHHHh
Confidence 7777765432 246778899999999998874 56777664 5667788887764
No 357
>PRK02628 nadE NAD synthetase; Reviewed
Probab=23.82 E-value=2.9e+02 Score=27.11 Aligned_cols=57 Identities=21% Similarity=0.245 Sum_probs=38.9
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCC---cEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAG---FRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN 94 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~---~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~ 94 (311)
.||=|.|.-+|+-...-....+...+ ++|+++-+||.+.|+ .-.++..++++.||++
T Consensus 364 vvvglSGGiDSal~l~l~~~a~~~lg~~~~~v~~v~mp~~~ss~-----------~s~~~a~~la~~LGi~ 423 (679)
T PRK02628 364 VVIGISGGLDSTHALLVAAKAMDRLGLPRKNILAYTMPGFATTD-----------RTKNNAVALMKALGVT 423 (679)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHhhCCCcceEEEEECCCCCCCH-----------HHHHHHHHHHHHhCCe
Confidence 79999999888865543333322123 899999999986552 2245677788888874
No 358
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to
Probab=23.48 E-value=2.5e+02 Score=20.66 Aligned_cols=90 Identities=13% Similarity=0.148 Sum_probs=47.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCC-CcEEEEEeCcCh
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGI-NKVFLVAKDFGA 105 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg 105 (311)
.||.-||-.- +......+..+..+.-++.+...-.- -++.+..+.+.+.++++.- +.=.++=.++||
T Consensus 3 IvivSHs~~l-A~Gi~~~~~~~~g~~~~i~~~gg~~d-----------~~~gt~~~~I~~ai~~~~~~~dgVlvl~DLGg 70 (125)
T TIGR02364 3 IVLVSHSKKI-AEGIKELIKQMAGDDVTIISAGGTDD-----------GRLGTSPDKIIEAIEKADNEADGVLIFYDLGS 70 (125)
T ss_pred EEEEeCCHHH-HHHHHHHHHHHcCCCccEEEEecCCC-----------CCccchHHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 4666677311 11222333333333456666553211 1333556667777777633 454667789999
Q ss_pred HHHH---HHHHhCCCceeeEEEeccC
Q 021530 106 RPAY---LFALLHPERVSGVITLGVP 128 (311)
Q Consensus 106 ~ia~---~~a~~~p~~v~~lvl~~~~ 128 (311)
.+.- .+....++++..+...+.|
T Consensus 71 s~~n~e~a~~~l~~~~~~~v~g~nlP 96 (125)
T TIGR02364 71 AVMNAEMAVELLEDEDRDKVHLVDAP 96 (125)
T ss_pred cHhHHHHHHHHhccccccEEEEechh
Confidence 9942 3333345566666666644
No 359
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=23.42 E-value=1.2e+02 Score=21.68 Aligned_cols=51 Identities=18% Similarity=0.162 Sum_probs=37.1
Q ss_pred CcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCC-cEEEEEeCcCh
Q 021530 52 GFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGIN-KVFLVAKDFGA 105 (311)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg 105 (311)
+-..|.+.+-|.+....+ ..-.++.+++.+..++++.++. +-.|+||....
T Consensus 66 N~~sigIe~~g~~~~~~~---~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 66 NSYSIGIELIGNFDGGPP---TAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred CCceEEEEEEeCCCCCCC---CHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 445677777777655321 2346777888888999999997 78999998765
No 360
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=23.38 E-value=60 Score=24.02 Aligned_cols=17 Identities=18% Similarity=0.340 Sum_probs=14.3
Q ss_pred eEEEECCCCCchhhhHH
Q 021530 27 VVVFLHGFPEIWYSWRH 43 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~ 43 (311)
-|+-+||++++...|-.
T Consensus 54 LVlSfHG~tGtGKn~v~ 70 (127)
T PF06309_consen 54 LVLSFHGWTGTGKNFVS 70 (127)
T ss_pred EEEEeecCCCCcHHHHH
Confidence 68889999999998753
No 361
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.17 E-value=5.6e+02 Score=23.60 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=53.2
Q ss_pred HHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCc--eeeEE
Q 021530 46 VAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPER--VSGVI 123 (311)
Q Consensus 46 ~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lv 123 (311)
..+...+|.||.+|=-|- ..-=+++.+.+.++-+.+..+.+.+|--+|=|.-|...|..+-+. +.++|
T Consensus 176 ~~ak~~~~DvvIvDTAGR----------l~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGR----------LHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHcCCCEEEEeCCCc----------ccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 344445678888886552 122346788888898999999999999999999999999887654 77888
Q ss_pred Ee
Q 021530 124 TL 125 (311)
Q Consensus 124 l~ 125 (311)
+.
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 74
No 362
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=23.17 E-value=2e+02 Score=26.43 Aligned_cols=38 Identities=29% Similarity=0.212 Sum_probs=22.9
Q ss_pred EEEEeCCCCCCCCCCCCCCCcCc-----HHHHHHHHHHHHHHhC
Q 021530 54 RAIAPDYRGYGLSDPPAEPEKAS-----FKDITNDLLATLDHLG 92 (311)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~~~~~-----~~~~a~dl~~~l~~l~ 92 (311)
-+|++| ||||..++-.....-. ..++|..+.+.|++.+
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~~ 234 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDP 234 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhCC
Confidence 489999 8999987633211111 2235666677777653
No 363
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=23.15 E-value=81 Score=31.05 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=23.2
Q ss_pred HHHHHHH---HhCCCcEEEEEeCcChHHHHHHHH
Q 021530 83 DLLATLD---HLGINKVFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 83 dl~~~l~---~l~~~~~~lvGhS~Gg~ia~~~a~ 113 (311)
++.+.++ .+++.--.+.|.|.||.++..+|+
T Consensus 52 ~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 52 ALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 4555554 445655688999999999999987
No 364
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=23.06 E-value=2.5e+02 Score=24.55 Aligned_cols=47 Identities=15% Similarity=0.213 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh-CCC---ceeeEEEeccCC
Q 021530 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPF 129 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvl~~~~~ 129 (311)
.-++.|.+.+.+-. +++|+ +.|-.-=++.|.+ +|+ ++++++++++.+
T Consensus 100 ~A~~~i~~~~~~~~--eitiv--a~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 150 (320)
T cd02653 100 SAAQAWVDLARAHP--DLIGL--ATGPLTNLALALREEPELPRLLRRLVIMGGAF 150 (320)
T ss_pred CHHHHHHHHHHhCC--CeEEE--ECCchHHHHHHHHHChHHHHhcCEEEEECCCc
Confidence 45666777777655 78888 7787766666553 674 788999888653
No 365
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=23.05 E-value=1.9e+02 Score=22.93 Aligned_cols=39 Identities=15% Similarity=0.149 Sum_probs=21.6
Q ss_pred EEECCCCCchhh-hH-HHHHHHHH----CCcEEEEeCCCCCCCCC
Q 021530 29 VFLHGFPEIWYS-WR-HQMVAVAA----AGFRAIAPDYRGYGLSD 67 (311)
Q Consensus 29 vllHG~~~~~~~-w~-~~~~~l~~----~~~~vi~~Dl~G~G~S~ 67 (311)
+++-|-+++..+ +. .++..+.. ...+++.+|.-|.+.+.
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~ 85 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAP 85 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGG
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccch
Confidence 445666655553 22 24444444 57899999999776554
No 366
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.05 E-value=63 Score=28.40 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=20.1
Q ss_pred HHHHHHhCCCc------EEEEEeCcChHHHHHHHH
Q 021530 85 LATLDHLGINK------VFLVAKDFGARPAYLFAL 113 (311)
Q Consensus 85 ~~~l~~l~~~~------~~lvGhS~Gg~ia~~~a~ 113 (311)
.++++..|+.. -.++|||+|=..|+..|.
T Consensus 109 ~~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 109 VEKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred HHHHHhcCCCcccccCCCeeeeccHHHHHHHHHhC
Confidence 34556666432 357999999988877664
No 367
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=23.00 E-value=5.3e+02 Score=22.77 Aligned_cols=88 Identities=11% Similarity=0.041 Sum_probs=49.1
Q ss_pred eEEEECCCCCc----h-hhhHHHHHHHHH-CCcEEEEeCCCCCCCCCCCC---------CCC-----cCcHHHHHHHHHH
Q 021530 27 VVVFLHGFPEI----W-YSWRHQMVAVAA-AGFRAIAPDYRGYGLSDPPA---------EPE-----KASFKDITNDLLA 86 (311)
Q Consensus 27 ~vvllHG~~~~----~-~~w~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~---------~~~-----~~~~~~~a~dl~~ 86 (311)
.|+|+-|.... . +.--.+...|.. ++.++|++-.+|-|.-.... ... ..++.+-+.-.-.
T Consensus 33 lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYr 112 (423)
T COG3673 33 LVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYR 112 (423)
T ss_pred EEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 68888885322 1 222223333333 46899999999999653211 000 1122222211111
Q ss_pred -HHHHhCC-CcEEEEEeCcChHHHHHHHHh
Q 021530 87 -TLDHLGI-NKVFLVAKDFGARPAYLFALL 114 (311)
Q Consensus 87 -~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~ 114 (311)
+++.... +++.++|.|-|+.+|-.+|..
T Consensus 113 FL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 113 FLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 3333333 679999999999999888774
No 368
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=22.93 E-value=85 Score=24.96 Aligned_cols=27 Identities=7% Similarity=-0.075 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 021530 77 FKDITNDLLATLDHLGINKVFLVAKDF 103 (311)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (311)
+..++..+..++++.++.+-.|+|||-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 344566677788888886678999963
No 369
>PLN02717 uridine nucleosidase
Probab=22.78 E-value=3e+02 Score=23.96 Aligned_cols=48 Identities=21% Similarity=0.392 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh-CCC---ceeeEEEeccCC
Q 021530 79 DITNDLLATLDHLGINKVFLVAKDFGARPAYLFALL-HPE---RVSGVITLGVPF 129 (311)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvl~~~~~ 129 (311)
.-++.|.+.+.+.. ++++|+ +.|-..=++.|.+ +|+ ++++++++++.+
T Consensus 103 ~A~~~i~~~~~~~~-~~itiv--a~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 154 (316)
T PLN02717 103 SAAEFLVEKVSEYP-GEVTVV--ALGPLTNLALAIKLDPSFAKKVGQIVVLGGAF 154 (316)
T ss_pred CHHHHHHHHHHhCC-CCEEEE--ECCcHHHHHHHHHHChHHHhhcCEEEEeCCCc
Confidence 34566777766544 678888 6787776666653 776 788999988653
No 370
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=22.75 E-value=70 Score=36.47 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHH
Q 021530 84 LLATLDHLGINKVFLVAKDFGARPAYLFA 112 (311)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 112 (311)
+.++++.+|+++-.++|||+|=..|+..|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 45667889999999999999998886654
No 371
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.51 E-value=1.3e+02 Score=25.94 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCC----CcEEEEEeC--cChHHHHHHHHhC
Q 021530 81 TNDLLATLDHLGI----NKVFLVAKD--FGARPAYLFALLH 115 (311)
Q Consensus 81 a~dl~~~l~~l~~----~~~~lvGhS--~Gg~ia~~~a~~~ 115 (311)
+.-++++++..++ +++.++|-| ||..+|..+....
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 5568888888775 579999997 9999998887653
No 372
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=22.33 E-value=2.5e+02 Score=22.40 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=27.4
Q ss_pred eEEEECCCCCchhh-hHH-HHHHHHHCCcEEEEeC--CCCCCCC
Q 021530 27 VVVFLHGFPEIWYS-WRH-QMVAVAAAGFRAIAPD--YRGYGLS 66 (311)
Q Consensus 27 ~vvllHG~~~~~~~-w~~-~~~~l~~~~~~vi~~D--l~G~G~S 66 (311)
.+|++-|++++..+ -.. +...|.+.|++++..| -.-||.+
T Consensus 24 ~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~ 67 (197)
T COG0529 24 AVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLN 67 (197)
T ss_pred eEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhccc
Confidence 79999999887663 222 3345667799999998 2225555
No 373
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=22.17 E-value=4.9e+02 Score=22.09 Aligned_cols=72 Identities=10% Similarity=0.157 Sum_probs=45.6
Q ss_pred HHHHHHH-CCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEe-CcChHHHHHHHHhC-CCcee
Q 021530 44 QMVAVAA-AGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAK-DFGARPAYLFALLH-PERVS 120 (311)
Q Consensus 44 ~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh-S~Gg~ia~~~a~~~-p~~v~ 120 (311)
.+..+.+ .++.+|.+|-+|....+ ....+.+.++++......++||-- ++++.-+...+..+ +-.+.
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~ 214 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYRA----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHID 214 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcCC----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCC
Confidence 3344433 26999999999975321 134445566666666556666654 67887777777764 34678
Q ss_pred eEEEe
Q 021530 121 GVITL 125 (311)
Q Consensus 121 ~lvl~ 125 (311)
++|+.
T Consensus 215 ~~I~T 219 (270)
T PRK06731 215 GIVFT 219 (270)
T ss_pred EEEEE
Confidence 88874
No 374
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=22.14 E-value=2.3e+02 Score=24.97 Aligned_cols=117 Identities=16% Similarity=0.232 Sum_probs=60.0
Q ss_pred eEEEECCEEEEEEecC-------CCCceEEEECCCC--CchhhhHHHHHHHHHCCcEEEEeCCCCCCC-----CCC----
Q 021530 7 KYIKVQGLNLHVAETG-------TGPNVVVFLHGFP--EIWYSWRHQMVAVAAAGFRAIAPDYRGYGL-----SDP---- 68 (311)
Q Consensus 7 ~~~~~~g~~i~y~~~G-------~g~~~vvllHG~~--~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~-----S~~---- 68 (311)
+|-+..+-.+||.+.| .|+ +=+|+||-+ ++-..-.+.+.... .+..||..|.-+-=. -.+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~-vDi~V~gaGTGGTitgvGRylke~~-~~~kVv~vdp~~S~~~~~~~~g~~~~~ 264 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGK-VDIFVAGAGTGGTITGVGRYLKEQN-PNIKVVGVDPQESIVLSGGKPGPTFHK 264 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCC-CCEEEeccCCCceeechhHHHHHhC-CCCEEEEeCCCcceeccCCCCCCCccc
Confidence 3445555568888777 355 678888764 44332222222222 257888877543111 111
Q ss_pred ---------CCCCCcCcHHHH----HHHHHHHHHHhCCCcEEEEEeCcChHHHHH-HHHhCCCceeeEEEe
Q 021530 69 ---------PAEPEKASFKDI----TNDLLATLDHLGINKVFLVAKDFGARPAYL-FALLHPERVSGVITL 125 (311)
Q Consensus 69 ---------~~~~~~~~~~~~----a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~-~a~~~p~~v~~lvl~ 125 (311)
|...+.-.++++ .++-...-..|-.+.=.++|-|-|+.++.. ..++.|+.-.+|++.
T Consensus 265 I~GIGyg~~p~~ld~~~vd~~~~~~~d~A~~~Ar~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~ 335 (362)
T KOG1252|consen 265 IQGIGYGFIPTTLDTKLVDEVLKVSSDEAIEMARRLALEEGLLVGISSGANVAAALKLAKRPENAGKLIVV 335 (362)
T ss_pred eeccccCcCccccchHHHHHHHHhCCHHHHHHHHHHHHhhCeeecccchHHHHHHHHHHhccccCCcEEEE
Confidence 100011111111 122223334455566789999999998654 344556666666654
No 375
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=21.91 E-value=1.6e+02 Score=22.83 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=36.0
Q ss_pred ccccceEEEeeCCcccC-CCCCchhhhhcccccccCCCeEEEEeCCCCCCcc-ccChhHHHHHHHHH
Q 021530 242 TVKVPALLILGEKDYFL-KFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQ-EQSPEEVNQLVLTF 306 (311)
Q Consensus 242 ~i~~P~L~i~G~~D~~~-~~~~~~~~~~~~~l~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~F 306 (311)
.+.+|+.++.+++|... +..... .+-.......+++.++ ++|+.+ .+++..+++.|..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-----~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDPD-----GWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCcc-----cccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 57899999999998643 111111 1111123468888887 578776 45666777666554
No 376
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.69 E-value=64 Score=28.51 Aligned_cols=19 Identities=26% Similarity=0.134 Sum_probs=16.1
Q ss_pred EEEEeCcChHHHHHHHHhC
Q 021530 97 FLVAKDFGARPAYLFALLH 115 (311)
Q Consensus 97 ~lvGhS~Gg~ia~~~a~~~ 115 (311)
.+.|.|.||.||..+|..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 5679999999999998643
No 377
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=21.60 E-value=2e+02 Score=18.70 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=20.3
Q ss_pred HCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHH
Q 021530 50 AAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATL 88 (311)
Q Consensus 50 ~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l 88 (311)
+.+|-+..||+||+=.- ..|+++.-+.+.+.+
T Consensus 13 dg~y~~~~Pdlpgc~s~-------G~T~eea~~n~~eai 44 (73)
T COG1598 13 DGGYVASVPDLPGCHSQ-------GETLEEALQNAKEAI 44 (73)
T ss_pred CCCEEEEeCCCCCcccc-------CCCHHHHHHHHHHHH
Confidence 34689999999998532 235555555444443
No 378
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=21.04 E-value=6.2e+02 Score=22.86 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=39.9
Q ss_pred eEEEECCCCCch---hhhHHHHHHHHHCCcEEEEeCCC--CCCCCCCCCCCCcCcHHHHHHHHHHHHHH---hCCCcEEE
Q 021530 27 VVVFLHGFPEIW---YSWRHQMVAVAAAGFRAIAPDYR--GYGLSDPPAEPEKASFKDITNDLLATLDH---LGINKVFL 98 (311)
Q Consensus 27 ~vvllHG~~~~~---~~w~~~~~~l~~~~~~vi~~Dl~--G~G~S~~~~~~~~~~~~~~a~dl~~~l~~---l~~~~~~l 98 (311)
|||++.-..... ......+..|.+.|+.|+-|..- .||..... .-.+.++..+.+.+.+.. +.-+++.+
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 577777643221 23355666777667777655522 22444321 234777877777776644 33345666
Q ss_pred EEe
Q 021530 99 VAK 101 (311)
Q Consensus 99 vGh 101 (311)
-|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 555
No 379
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=20.95 E-value=4.3e+02 Score=20.97 Aligned_cols=60 Identities=18% Similarity=0.269 Sum_probs=36.8
Q ss_pred eEEEEC-CCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHH-HHHHHhCCCc
Q 021530 27 VVVFLH-GFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLL-ATLDHLGINK 95 (311)
Q Consensus 27 ~vvllH-G~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~-~~l~~l~~~~ 95 (311)
|++++. -.+.+.-.. ..+..|.+.|+.|+-|.. |+ =.+ .-+++++++.+. +++|.||++.
T Consensus 117 pvii~P~~M~~~p~~~-~Nl~~L~~~G~~vi~P~~-g~--~a~-----p~~~~~~~~~~v~~~~~~l~~~~ 178 (185)
T PRK06029 117 RLVLCVRETPLHLGHL-RNMTKLAEMGAIIMPPVP-AF--YHR-----PQTLEDMVDQTVGRVLDLFGIEH 178 (185)
T ss_pred CEEEEeccccCCHHHH-HHHHHHHHCcCEEECCCc-cc--ccC-----CCCHHHHHHHHHHHHHHhcCCCC
Confidence 455555 223333333 355667777788776664 43 222 248899998877 6899999863
No 380
>PHA02114 hypothetical protein
Probab=20.89 E-value=1.5e+02 Score=20.71 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=23.9
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeC
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPD 59 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~D 59 (311)
+||+=--+..+..-|-.++..|.+.||+||+-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 566666677777778888877777788887643
No 381
>COG0294 FolP Dihydropteroate synthase and related enzymes [Coenzyme metabolism]
Probab=20.78 E-value=2.4e+02 Score=24.01 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=29.8
Q ss_pred cEEEEeCCC-CCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHH
Q 021530 53 FRAIAPDYR-GYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFA 112 (311)
Q Consensus 53 ~~vi~~Dl~-G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 112 (311)
...|..|.. |||++.. .++ .+...+.++. ......|+|+|-+..++..+.
T Consensus 171 ~~~iilDpg~gf~k~~~------~n~-~ll~~~~~~~---~~g~piLvg~srK~~ig~~~~ 221 (274)
T COG0294 171 RELIILDPGFGFGKTPE------HNL-ELLARLSEFL---ELGFPILVGHSRKSFIGAILG 221 (274)
T ss_pred hhhEEecCCcCCCcccc------hhH-HHHHhHHHhh---cCCCcEEEecCCceehhhhcC
Confidence 447788854 5554421 121 2222233332 355689999999999988777
No 382
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.72 E-value=1.8e+02 Score=23.99 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=25.3
Q ss_pred cCCCCceEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCC
Q 021530 21 TGTGPNVVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDY 60 (311)
Q Consensus 21 ~G~g~~~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl 60 (311)
.++.+ +.|++-|.....-... +...+.+.||+|++--.
T Consensus 3 ~~~~~-k~VlItgcs~GGIG~a-la~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 3 LQSQP-KKVLITGCSSGGIGYA-LAKEFARNGYLVYATAR 40 (289)
T ss_pred cccCC-CeEEEeecCCcchhHH-HHHHHHhCCeEEEEEcc
Confidence 34555 7888888744433333 56678888999998643
No 383
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=20.71 E-value=1.3e+02 Score=26.77 Aligned_cols=66 Identities=18% Similarity=0.276 Sum_probs=37.3
Q ss_pred eEEEECCCCCchhhhHHHHHHHHHCCcEEEEeCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCCCcEEEE
Q 021530 27 VVVFLHGFPEIWYSWRHQMVAVAAAGFRAIAPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLV 99 (311)
Q Consensus 27 ~vvllHG~~~~~~~w~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (311)
.+|.+-|.-+|+- .+-.|.+.||.|+.+-++=....+... ......+-.+|...+++.|+|. ++++
T Consensus 3 V~vamSGGVDSsv----aA~LLk~~G~~V~Gv~m~~~~~~~~~~--~~c~~~~d~~~a~~va~~LgIp-~~v~ 68 (356)
T PF03054_consen 3 VLVAMSGGVDSSV----AAALLKEQGYDVIGVTMRNWDEEDESG--KSCCSEEDIEDARRVAEKLGIP-HYVV 68 (356)
T ss_dssp EEEE--SSHHHHH----HHHHHHHCT-EEEEEEEE-SS-SSSHH---HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred EEEEccCCHHHHH----HHHHHHhhcccceEEEEEEeccccccC--CCCCchhhHHHHHHHHHhcCCC-EEEE
Confidence 5677777766642 122344669999988887766543211 2344556678899999999984 4444
No 384
>COG3675 Predicted lipase [Lipid metabolism]
Probab=20.47 E-value=1.6e+02 Score=25.37 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=51.3
Q ss_pred CCCceEEEECC------CCCchhhhHHHHHHH--------HHCCcEEEEeCCCCCCCCCCCC-CCCcCcHHHHHHHHHHH
Q 021530 23 TGPNVVVFLHG------FPEIWYSWRHQMVAV--------AAAGFRAIAPDYRGYGLSDPPA-EPEKASFKDITNDLLAT 87 (311)
Q Consensus 23 ~g~~~vvllHG------~~~~~~~w~~~~~~l--------~~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~a~dl~~~ 87 (311)
++. +++-.-| |+.+...|......+ .+. ..+--.| +.|.+..+. ..+...+.-..+.+..+
T Consensus 92 s~~-vi~vf~gs~~Rqdw~~~fd~de~n~~~l~~g~lay~ie~-g~~~~ld--n~gm~~~~sr~~dtlgmtv~~~q~~~l 167 (332)
T COG3675 92 SDE-VIVVFKGSHSRQDWLLNFDVDERNCRHLCVGELAYRIEA-GFYHLLD--NEGMHRQPSRNQDTLGMTVIEKQEQTL 167 (332)
T ss_pred CCc-EEEEEeccccccccchhcccchhhhhHHHHHHHHHHhhc-cceeecc--ccccccchhhhhhhcCchHHHHHHHHH
Confidence 444 6666666 455555554433322 232 2333455 444443321 11222322233345556
Q ss_pred HHHhCC-CcEEEEEeCcChHHHHHHH----HhCCCceeeEEE-eccC
Q 021530 88 LDHLGI-NKVFLVAKDFGARPAYLFA----LLHPERVSGVIT-LGVP 128 (311)
Q Consensus 88 l~~l~~-~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl-~~~~ 128 (311)
++..-. -+..++|||.|+.++...+ .++| +|..+++ .+.|
T Consensus 168 leeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p-~vdnlv~tf~~P 213 (332)
T COG3675 168 LEEIPQGYRIGITGHSSGGAIICVRGTYFERKYP-RVDNLVVTFGQP 213 (332)
T ss_pred HHhcccceEEEEEeecCCccEEEEeccchhcccC-CcccceeeccCC
Confidence 666655 4568999999998865433 3454 4666663 4444
No 385
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=20.02 E-value=1.5e+02 Score=27.69 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=28.8
Q ss_pred cHHHHHHHHHH-HHHHhCCCcEEEEEe-CcChHHHHHHHHhC
Q 021530 76 SFKDITNDLLA-TLDHLGINKVFLVAK-DFGARPAYLFALLH 115 (311)
Q Consensus 76 ~~~~~a~dl~~-~l~~l~~~~~~lvGh-S~Gg~ia~~~a~~~ 115 (311)
=++++++|+.. +++.++-.+-.++|| |=||.+|..++.+-
T Consensus 382 yLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 382 YLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp GHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence 46789999875 456676666667765 88999999888864
Done!