BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021533
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 203/328 (61%), Gaps = 42/328 (12%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHF--PIC 58
MKI+CDVC+K EASVFCTADEA+LC CDH+VHHANKLASKH RFSLL+PSS + P+C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 59 DVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSK 118
D+CQ+++A LFCQQDRAILC+DCD IH ANEHT+KH+RFLLTGVKLSATS++Y +
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120
Query: 119 SNPNGCDSSVPVPDANKSIKKTVVSVAPVNSNPPSNSEISTSSAVTNSNGGNSVIAANEC 178
S+ + + VP + SI P+ S PP +++I S + NGG++ + N+
Sbjct: 121 SSSSSSNQDFSVPGS--SISNPPPLKKPL-SAPPQSNKIQPFSKI---NGGDASV--NQW 172
Query: 179 GTVSASSISEYL-EMLPGWHVEDLLDSSSDPLGFCKG--NDGTLPFLDADLDCNLS---- 231
G S S+ISEYL + LPGWHVED LDSS GF K +DG LP+++ + D N
Sbjct: 173 G--STSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNN 230
Query: 232 ----------SFSSERVGIWVPQAASPVQTCLYSSQSQTAGHISFKDAKEVTGVKAVS-- 279
S S+ +GIWVPQ + + + +I F + T + VS
Sbjct: 231 NNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFA 290
Query: 280 ----------SNRRYTED-VFTVPQISP 296
+N+R+ +D FTVPQI+P
Sbjct: 291 PIQNMKQQGQNNKRWYDDGGFTVPQITP 318
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 140/213 (65%), Gaps = 17/213 (7%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
MKI C VC+K EASVFC ADEAALC+ CD VH ANKLA KH RFSL P+ K P+CD+
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSN 120
C ERRA LFCQ+DRAILCR+CDIPIH ANEHT+KHNRFLLTGVK+SA+ + Y + SN
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRA---SN 117
Query: 121 PNGCDSSVPVPDANKSIKKTVVSVAPVNSNPPSNSEISTSSAVTNSNGGNSV------IA 174
N S K+ K+V S P ++ SN ++SS+ T SN + ++
Sbjct: 118 SN----SAAAFGRAKTRPKSVSSEVPSSA---SNEVFTSSSSTTTSNCYYGIEENYHHVS 170
Query: 175 ANECGTVSASSISEYL-EMLPGWHVEDLLDSSS 206
+ G+ SISEYL E LPGW VEDLL+ S
Sbjct: 171 DSGSGSGCTGSISEYLMETLPGWRVEDLLEHPS 203
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
MKIQCDVC K+ A+V C ADEAALC CD +H ANKLASKH R L S+K FP CD+
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK-FPRCDI 59
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSN 120
CQE+ AF+FC +DRA+LCRDCD IH AN + H RFL TG+K++ TST+ + + K+
Sbjct: 60 CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 119
Query: 121 P 121
P
Sbjct: 120 P 120
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
MKIQC+VC +EA+V C ADEAALC CD ++H ANKLA KH R L S+ P CD+
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-SASASSIPKCDI 59
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSN 120
CQE F FC QDRA+LCR CD+ IHT N H H RFLLTG+K+ S + T +KS+
Sbjct: 60 CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLES-IDTGPSTKSS 118
Query: 121 PNGCDSSV 128
P D ++
Sbjct: 119 PTNDDKTM 126
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
MKIQCDVC K+ A++ C ADEAALC CD VH ANKLASKH R L S+K FP CD+
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTK-FPPCDI 59
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSN 120
C E+ AF+FC +DRA+LCRDCD H N + H RFL TG++++ +ST V K++
Sbjct: 60 CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 119
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + A++FC AD A LC CD ++H ANKLAS+H R L C+VC++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL----------CEVCEQA 57
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLT 101
A + C+ D A LC CD IH+AN +++H R +T
Sbjct: 58 PAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGV 103
+CD C+ A LFC+ D A LC DCD IHTAN+ +H R L V
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEV 53
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + +V+C AD A LC +CD +VH AN+LAS+H R +C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVR----------VCQSCERA 61
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSNPNGC 124
A FC+ D A LC CD IH+AN ++H R + + + Y+ S + +N + C
Sbjct: 62 PAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPI------SEYSYSSTATN-HSC 114
Query: 125 DSSVPVPD 132
+++V P+
Sbjct: 115 ETTVTDPE 122
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 LLHPSSKHFPICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLS 106
+L S CD C+ ++C+ D A LC CD +H AN +H R +
Sbjct: 1 MLKVESNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCER 60
Query: 107 ATSTLYTSSVSKSNPNGCDSSVPVPDANKSIKK-TVVSVAPVNSNPPSNSEISTSSAVTN 165
A + + + + S CDS + AN ++ V + P+ SE S SS TN
Sbjct: 61 APAAFFCKADAASLCTTCDSE--IHSANPLARRHQRVPILPI-------SEYSYSSTATN 111
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + +V+C AD A LC TCD RVH AN++AS+H R +C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVR----------VCQSCESA 65
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSN 120
A C+ D A LC CD IH+AN ++H R + + ++ S++ S N
Sbjct: 66 PAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSETDADN 121
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 58 CDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVS 117
CD C+ ++C+ D A LC CD +H AN +H R + SA + + +
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 118 KSNPNGCDSSV 128
S CD+ +
Sbjct: 76 ASLCTACDAEI 86
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + A+++C D A LC +CD +VH ANKLAS+H R + C+VC++
Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM----------CEVCEQA 55
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLT 101
A + C+ D A LC CD IH+AN ++H R +T
Sbjct: 56 PAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
+CD C+ A L+C+ D A LC CD +H AN+ +H R +
Sbjct: 5 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM 48
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + +V+C AD A LC +CD +VH AN++AS+H R +C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR----------VCESCERA 69
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTS 114
A C+ D A LC CD +H+AN ++H R + + ++ S++ T+
Sbjct: 70 PAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 119
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 10/85 (11%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C+ S A V+C AD A LC CD +VH AN+L +KH R SLL CD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR-SLL---------CDSCNES 62
Query: 65 RAFLFCQQDRAILCRDCDIPIHTAN 89
+ LFC+ +R++LC++CD HTA+
Sbjct: 63 PSSLFCETERSVLCQNCDWQHHTAS 87
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
+CD C A ++C+ D A LC CD +H AN+ KH R LL
Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL 55
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 2 KIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVC 61
++ CD C + A +FC AD A LC CD +VH AN L+ KH R ICD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQ----------ICDNC 55
Query: 62 QERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTG 102
+ C D ILC++CD +H + + H R + G
Sbjct: 56 GNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C A+VFC D A LC CD R+H ++H R +C+VC++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVW----------VCEVCEQA 67
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNR 97
A + C+ D A LC CD IH+AN +H R
Sbjct: 68 PAAVTCKADAAALCVSCDADIHSANPLASRHER 100
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 3 IQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQ 62
+ C+ C + A +FC AD A LC CD VH AN L+ KH R ICD C
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQ----------ICDNCS 59
Query: 63 ERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTG 102
+ + C D +LC++CD +H + + H R + G
Sbjct: 60 KEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
M CD C + + V+C +D A LC +CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTA-NEHTQKHNR 97
C + A + C +R LC++CD H N T H++
Sbjct: 51 CNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
+CD C E+R+ ++C+ D A LC CD +H+AN +++H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
M CD C + + V+C +D A LC +CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL----------VCER 50
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIH 86
C + A + C ++R LC++CD H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
+CD C E+R+ ++C+ D A LC CD +H+AN +++H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQER 64
CD C + + V+C AD A LC +CD RVH AN++AS+H R +C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVR----------VCEACERA 84
Query: 65 RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTSSVSKSNPNG 123
A L C+ D A LC CD+ +H+AN L + + ATS L + V+ + G
Sbjct: 85 PAALACRADAAALCVACDVQVHSANP---------LPAITIPATSVLAEAVVATATVLG 134
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
M+ C+ C A V+C AD A LC TCD +VH AN L+ +H R L CD
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL----------CDS 59
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTA--NEHTQKHNR 97
C+ + + C + LC C+ H +EH ++ R
Sbjct: 60 CKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRRRDLR 98
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 57 ICDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
+C+ C+ RA ++C D A LC CD +H+AN + +H R +L
Sbjct: 13 VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
M+ +CD C +A ++C +D A LC CD VH AN L+ +H R SLL C+
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR-SLL---------CEK 50
Query: 61 CQERRAFLFCQQDRAILCRDC 81
C + + C + LC+ C
Sbjct: 51 CSLQPTAVHCMNENVSLCQGC 71
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 58 CDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
CD C +A ++C+ D A LC +CD+ +H+AN +Q+H R LL
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDV 60
M+ +CD C S+A ++C +D A LC CD VH AN L+ +H R SL IC+
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR-SL---------ICEK 50
Query: 61 CQERRAFLFCQQDRAILCRDCDIPIHTAN-----EHTQKHNRFLLTGVKLSATSTLYTSS 115
C + A + C ++ C+ C H +N Q N F +G SS
Sbjct: 51 CFSQPAAIRCLDEKVSYCQGCH--WHESNCSELGHRVQSLNPF--SGCPSPTDFNRMWSS 106
Query: 116 VSKSNPNGCDS----SVPVPDANKSIKKTVVSVAPVNSNPPSNSEISTSSAVTNSNGGNS 171
+ + +G S S P+ D N ++ T S+ P N + N + S T S G
Sbjct: 107 ILEPPVSGLLSPFVGSFPLNDLNNTMFDTAYSMVPHNISYTQNFSDNLSFFSTESKGYPD 166
Query: 172 VIAANECG 179
++ E G
Sbjct: 167 MVLKLEEG 174
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSL 47
CD C K A +C AD+A LC +CD VH AN LA +H R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 58 CDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
CD C +RRA +C D A LC+ CD +H+AN ++H R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 5 CDVCNK-SEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSL 47
CD C K S AS +C AD+A LC +CD +H AN LA +H R L
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 58 CDVCQER-RAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLSATSTLYTS 114
CD C +R RA +C D A LC+ CD IH+AN ++H R L + T+ TS
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTS 79
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSL 47
CD C K A +C AD+A LC CD VH AN LA +H R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 58 CDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLL 100
CD C +RRA +C D A LC CD +H+AN ++H R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 5 CDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSL 47
C++C A +C +D+A LC CD VH AN +A+KH R L
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 63
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 58 CDVCQERRAFLFCQQDRAILCRDCDIPIHTANEHTQKHNRFLLTGVKLS 106
C++C + A +C D A LC CD +H+AN KH R L ++S
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEIS 69
>sp|A6L1L8|SYA_BACV8 Alanine--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=alaS PE=3 SV=1
Length = 871
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 168 GGNSVIAANECGTV---SASSIS---EYLEMLPGWHVEDLLDSSSDPLGFCKGNDGTLPF 221
GG V A + G V S SS++ +E + G VE+L+D+ D L ND F
Sbjct: 665 GGTHVPATGKIGMVRIISESSVAAGVRRIEAITGAKVEELMDTVQDTL-----NDLKALF 719
Query: 222 LDA-DLDCNLSSFSSERVGIWVPQAASPVQTCLYSSQSQTAGHISFKDAKEVTGVKAVSS 280
+A DL + + E G+ V+ + + + ++AKE+ GVK V +
Sbjct: 720 NNAPDLKVAIRKYIDENAGL-----KKQVEEFMKEKGAALKARL-VENAKEINGVKVVKA 773
Query: 281 NRRYTEDVFTVPQISPQLAG 300
+ DV V I+ QL G
Sbjct: 774 IIPMSADV--VKDIAFQLKG 791
>sp|P16088|POL_FIVPE Pol polyprotein OS=Feline immunodeficiency virus (isolate Petaluma)
GN=pol PE=1 SV=1
Length = 1124
Score = 33.9 bits (76), Expect = 1.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 149 SNPPSNSEISTSSAVTNSNGGNSV--IAANECGTVSA-SSISEYLEMLPGWHVEDLLDSS 205
S PS S ++S+A+ SNGG ++ + N+ GT + E L + G+ ++ LLD+
Sbjct: 11 SCSPSESNAASSNAICTSNGGETIGFVNYNKVGTTTTLEKRPEILIFVNGYPIKFLLDTG 70
Query: 206 SD 207
+D
Sbjct: 71 AD 72
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 20/104 (19%)
Query: 1 MKIQCDVCNKSEASVFCTADEAALCDTCDHRVHHANKLASKHHRFSL-----------LH 49
+ ++CD ++ A ++CT ++ LC+ C H N L SKH R L LH
Sbjct: 104 LNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVHCRLH 162
Query: 50 PSSKHFPICDVCQERRAFLFCQQDRAILCRDC-DIPIHTANEHT 92
S + + VC+E L C + ++C C D H + H
Sbjct: 163 SS---YVVEFVCKE----LSCDTESPLMCMMCRDYGRHKGHSHV 199
>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1
SV=1
Length = 1061
Score = 33.9 bits (76), Expect = 1.7, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 191 EMLPGWHVEDLLDSSSDPLGFCKGNDGTLPFLDADLDCNLSSFSSERVGIWVPQAASPV 249
++LPGW V +L SS + LG C L +D + N + F +G AA+PV
Sbjct: 71 DLLPGWTVRTVLGSSENALGVCSDTAAPLAAVDLKWEHNPAVF----LGPGCVYAAAPV 125
>sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein 1 OS=Pongo abelii
GN=ZFYVE1 PE=2 SV=1
Length = 789
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 8 CNKSEASVF-CTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQ---- 62
C+ ++ ++F C + C C+ +H +L ++H L P H P CD+C+
Sbjct: 24 CSGTDEAIFECDECCSLQCLRCEEELHRQERL--RNHERIRLKPG--HVPYCDLCKGLSG 79
Query: 63 -----ERRAFLFCQQDRAILCRDCDIPIHTAN 89
+RA + CQ + LC +C H+
Sbjct: 80 HLPGVRQRAIVRCQTCKINLCLECQKRTHSGG 111
>sp|Q556W2|ABCGH_DICDI ABC transporter G family member 17 OS=Dictyostelium discoideum
GN=abcG17-1 PE=3 SV=1
Length = 1476
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 98 FLLTGVKLS--ATSTLYTSSVSKSNPNGCDSSVPVPDANKSIKKTVVSVAPVNSNPPSNS 155
FLL GV++ A S+ Y + NP + K I+ V + PS +
Sbjct: 1337 FLLCGVQIPPPAMSSFYQDWLYHLNPAKYFLEGLITTVLKPIEVLCTDVDLIKFTAPSGT 1396
Query: 156 EISTSSAVTNSNGGNSVI----AANECGTVSASSISEYLEMLPGW 196
+ T SA V+ NECG SS S+Y E GW
Sbjct: 1397 DCQTYSAPFLQQATGYVVPLSNTTNECGYCIYSSGSDYFETSLGW 1441
>sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens
GN=ZFYVE1 PE=1 SV=1
Length = 777
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 8 CNKSEASVF-CTADEAALCDTCDHRVHHANKLASKHHRFSLLHPSSKHFPICDVCQ---- 62
C+ ++ ++F C + C C+ +H +L ++H L P H P CD+C+
Sbjct: 24 CSGTDEAIFECDECCSLQCLRCEEELHRQERL--RNHERIRLKPG--HVPYCDLCKGLSG 79
Query: 63 -----ERRAFLFCQQDRAILCRDCDIPIHTAN 89
+RA + CQ + LC +C H+
Sbjct: 80 HLPGVRQRAIVRCQTCKINLCLECQKRTHSGG 111
>sp|P19028|POL_FIVSD Pol polyprotein OS=Feline immunodeficiency virus (strain San Diego)
GN=pol PE=3 SV=1
Length = 1124
Score = 32.7 bits (73), Expect = 3.1, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 149 SNPPSNSEISTSSAVTNSNGGNSV--IAANECGTVSA-SSISEYLEMLPGWHVEDLLDSS 205
S PS S + S+A+ SNGG + I N+ GT ++ E L + G+ ++ LLD+
Sbjct: 11 SCSPSESSAANSNAICTSNGGKIIGFINYNKVGTTTSLEKRPEILIFVNGYPIKFLLDTG 70
Query: 206 SD 207
+D
Sbjct: 71 AD 72
>sp|Q5B5P1|RGLC_EMENI Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rglC PE=3 SV=1
Length = 1041
Score = 32.0 bits (71), Expect = 5.8, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 66/189 (34%), Gaps = 43/189 (22%)
Query: 136 SIKKTVVSVAPVNSNPPSNSEISTSSAVTNSNGGNSVIAANECGTVSASSISEYLEMLPG 195
+++KT V + + + + S S+ T SN SV A G
Sbjct: 5 TLRKTFVFLGLATYSAAALTTTSNSTHYTISNSRFSVAVAKSNG---------------- 48
Query: 196 WHVEDLLDSSSDPLGFCKGNDGTLPFLDADLDCNLSSFSSERVGIWVPQA---------- 245
HV D D LG GN G P+LD S G W P A
Sbjct: 49 -HVVDANLDGQDLLGPLSGNSGKGPYLDC---------SCTPEGFWTPGAEPALVNGTDS 98
Query: 246 -ASP----VQTCLYSSQSQTAGHISFKDAKEVTGVKAVSSNRRYTEDVFTVPQISPQLAG 300
+P + T Y + +QT F +E TG+ A S Y E + + + +L
Sbjct: 99 TGTPYVGVIMTDTYETTNQTLSQYLFLRGEE-TGLHAFSRVTYYNESDYFLRGLG-ELRT 156
Query: 301 FKRSRPNIW 309
R N+W
Sbjct: 157 LFRPNTNLW 165
>sp|P77503|YCJS_ECOLI Uncharacterized oxidoreductase YcjS OS=Escherichia coli (strain
K12) GN=ycjS PE=1 SV=1
Length = 351
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 7 VCNKSEASVFCTADEAALCDTCDHRVHHANKLASKH 42
V +K AS +CT ++ L CD R+ A LA K+
Sbjct: 20 VADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKY 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,519,197
Number of Sequences: 539616
Number of extensions: 4310112
Number of successful extensions: 16286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 15805
Number of HSP's gapped (non-prelim): 512
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)