BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021535
MENSYATSNSNGPTSNGQVMMHSPYQQCVKGSLSWLDLRVFYVRVSKFESDDSTPECLTL
NHIPLHPHTLLEVNGVRTSIYADGASTLLRRDRLDKKSEEVTFVSTDSIRTTGSVKFEVF
DKDVLVLSGVIESCNSNGFTTESRNHDQRWCMNCKSDITAGPGFLKAKQFMSSDSASPTI
EVYVAGTFSDTPIILTKTLQLSSRKKQTRRGVLDSIPEYEASEESQKDTPSELPLQVLDF
SDHKPESEYYNHLYSGTDFLEGEDEELSWFNAGVRVGVGIGLSICLGIGIGVGMLVRTYQ
GTTRNFRRRLL

High Scoring Gene Products

Symbol, full name Information P value
AT1G75180 protein from Arabidopsis thaliana 7.9e-78
AT1G19400 protein from Arabidopsis thaliana 1.3e-77
AT1G01500 protein from Arabidopsis thaliana 1.1e-37

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021535
        (311 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2025187 - symbol:AT1G75180 "AT1G75180" species...   783  7.9e-78   1
TAIR|locus:2016382 - symbol:AT1G19400 "AT1G19400" species...   781  1.3e-77   1
TAIR|locus:2025401 - symbol:AT1G01500 "AT1G01500" species...   404  1.1e-37   1


>TAIR|locus:2025187 [details] [associations]
            symbol:AT1G75180 "AT1G75180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP002684
            EMBL:AC025814 ProtClustDB:CLSN2689208 UniGene:At.43440
            UniGene:At.48375 EMBL:AY150399 EMBL:AK317157 IPI:IPI00540924
            PIR:A96782 RefSeq:NP_565103.1 RefSeq:NP_974146.1 PRIDE:Q9FRK9
            EnsemblPlants:AT1G75180.1 EnsemblPlants:AT1G75180.3 GeneID:843855
            KEGG:ath:AT1G75180 TAIR:At1g75180 InParanoid:Q9FRK9 OMA:TITHIPL
            PhylomeDB:Q9FRK9 Genevestigator:Q9FRK9 Uniprot:Q9FRK9
        Length = 315

 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 169/317 (53%), Positives = 212/317 (66%)

Query:     1 MENSYATSNSNGPTSNG-QVMMHSPYQQCVKGSLS--WLDLRVFYVRVSKFESDDSTPEC 57
             M   Y T N NG  S   +   ++ +   +  SLS   LDLRVFYVR+S F+ D STPE 
Sbjct:     1 MVEPYETRN-NGEASQMIRYQSYNHHNSRLPSSLSSPLLDLRVFYVRISNFKVDHSTPEV 59

Query:    58 LTLNHIPLHPHTLLEVNGVRTSIYADGASTLLRRDRLDKKSEEVTFVSTDSIRTTGSVKF 117
             LT+ HIPL P +LLE+NGVR S+Y++G S+ LRRDR+DKKSE  TF+STD+IR +GSVKF
Sbjct:    60 LTITHIPLDPDSLLEINGVRMSMYSEGVSSQLRRDRVDKKSEVATFISTDNIRLSGSVKF 119

Query:   118 EVFDKDVLVLSGVIESCNSNGFTTESRNHDQRWCMNCKSDITAGPGFLKAKQFMSSDSAS 177
             EV+DKD LVLSG +E   SNGFT ES++  +RW MNC+++ITA  GFLK K    S+ +S
Sbjct:   120 EVYDKDELVLSGTLEMSGSNGFTGESKHSVKRWNMNCEAEITAESGFLKEKHIGGSELSS 179

Query:   178 P--TIEVYVAGTFSDTPIILTKTLQLSSRKKQTRRGVLDSIPEYEASEESQKDTPSELPL 235
             P  TIEVYV G FS TPIILTKTLQL  RKK  R   LDSIPEYE ++E  K   SEL  
Sbjct:   180 PLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIPEYE-TDEPHKGNSSELDY 238

Query:   236 QVLDFSDHKPESE-YYNHLYSGTDFLEGEDEELSWFNAGVRXXXXXXXXXXXXXXXXXXM 294
             QV ++  +K E E  ++ +Y   ++ +GED E+SWFNAGVR                  +
Sbjct:   239 QVTEYGSYKQEYEGEHSDMYWNREYADGEDGEMSWFNAGVRVGVGIGLGVCVGLGIGVGL 298

Query:   295 LVRTYQGTTRNFRRRLL 311
             LVRTYQ TTRNFRRR++
Sbjct:   299 LVRTYQSTTRNFRRRII 315


>TAIR|locus:2016382 [details] [associations]
            symbol:AT1G19400 "AT1G19400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 UniGene:At.47924 UniGene:At.41750
            EMBL:AY072184 EMBL:AY096740 EMBL:AK226361 IPI:IPI00522900
            RefSeq:NP_173373.2 RefSeq:NP_850946.1 EnsemblPlants:AT1G19400.1
            EnsemblPlants:AT1G19400.2 GeneID:838523 KEGG:ath:AT1G19400
            TAIR:At1g19400 InParanoid:Q8VYC6 OMA:WRSECID PhylomeDB:Q8VYC6
            ProtClustDB:CLSN2689208 Genevestigator:Q8VYC6 Uniprot:Q8VYC6
        Length = 303

 Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
 Identities = 165/293 (56%), Positives = 203/293 (69%)

Query:    22 HSPYQQCVKGSLSWLDLRVFYVRVSKFESDDSTPECLTLNHIPLHPHTLLEVNGVRTSIY 81
             H+  Q   + S  WLDLRVFYVR+S F  +DSTPE LT+NHIPL P TLLE+NGVR  +Y
Sbjct:    20 HNYNQHSSRSSSPWLDLRVFYVRISNFVVEDSTPEVLTINHIPLDPDTLLEINGVRMGMY 79

Query:    82 ADGASTLLRRDRLDKKSEEVTFVSTDSIRTTGSVKFEVFDKDVLVLSGVIESCNSNGFTT 141
             ++G S+ LRRDR+DKKSEE T+VSTD+IR TGSVKFEV+DK+ LVLSG +E   SNGFT 
Sbjct:    80 SEGGSSQLRRDRVDKKSEEATYVSTDNIRLTGSVKFEVYDKNELVLSGTLEMSGSNGFTG 139

Query:   142 ESRNHDQRWCMNCKSDITAGPGFLKAKQFMSSDSASP--TIEVYVAGTFSDTPIILTKTL 199
             ES+N   RW MNC++++TAG GFLK K     + +SP  TIEVYV G FS TPIILTKTL
Sbjct:   140 ESKN---RWKMNCEAEVTAGSGFLKEKSINGQELSSPLPTIEVYVTGCFSGTPIILTKTL 196

Query:   200 QLSSRKKQTRRGVLDSIPEYEASEESQKDTPSELPLQVL-DFSDHKPESEYYNHLYSGTD 258
             QL  +KKQ+RR  LD+IPEYE +E  QKDT   L LQ   ++ ++K   EY   +Y  ++
Sbjct:   197 QLGLKKKQSRRMALDAIPEYETAEP-QKDTSYALDLQATTEYGNYK--EEYEGDMYWRSE 253

Query:   259 FLEGEDEELSWFNAGVRXXXXXXXXXXXXXXXXXXMLVRTYQGTTRNFRRRLL 311
              ++GE   +SWFNAGVR                  +LVRTYQ TTR FRRRLL
Sbjct:   254 CIDGE---MSWFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRTFRRRLL 303


>TAIR|locus:2025401 [details] [associations]
            symbol:AT1G01500 "AT1G01500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] GO:GO:0016021 EMBL:CP002684
            EMBL:Y12776 EMBL:AC061957 EMBL:Y10087 EMBL:BT002511 EMBL:BT008724
            EMBL:AK227140 EMBL:AY088357 IPI:IPI00525075 RefSeq:NP_563628.1
            UniGene:At.27718 IntAct:Q8GUH2 EnsemblPlants:AT1G01500.1
            GeneID:839430 KEGG:ath:AT1G01500 TAIR:At1g01500 eggNOG:NOG270032
            HOGENOM:HOG000239878 InParanoid:Q8GUH2 OMA:INGARIP PhylomeDB:Q8GUH2
            ProtClustDB:CLSN2687609 Genevestigator:Q8GUH2 Uniprot:Q8GUH2
        Length = 327

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 113/305 (37%), Positives = 158/305 (51%)

Query:    23 SPYQQCVKGSLSWLDLRVFYVRVSKFESDDSTPECLTLNHIPLHPHTLLEVNGVRTSIYA 82
             SP         +WL++R+FYVR++    ++  P+ LTL H        LEVNGVR    +
Sbjct:    30 SPASSISLSQSAWLEVRLFYVRIAPCVVEN-VPDFLTLRHPRRETGASLEVNGVRVPS-S 87

Query:    83 DGASTLLRRDRLDKKSEEVTFVSTDSIRTTGSVKFEVFDKDVLVLSGV---IESCNSNGF 139
               AS  LRRDR+D++S EVT+VST+++R TG V FEV+D + +VL G    IE   +NG 
Sbjct:    88 QTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIEGAWNNGT 147

Query:   140 TTESRNHDQRWCMNCKSDITAGPGFLK---AKQFMSSDS--ASPTIEVYVAGTFSDTPII 194
              ++ +     W M+C   I  G G +    A  F       +SP++EVY+AG     P+I
Sbjct:   148 VSDPKTG---WGMDCY--IAMGNGHVSGPSASVFFQPKFGVSSPSVEVYIAGCCGGVPVI 202

Query:   195 LTKTLQLSSRKKQTRRGVLDSIPE-YEASEESQKDT-PSELP----LQVLDFS-DHKPES 247
             LTKT+Q S R+K  R   LD+IPE  E  +E    T   EL     +Q+++   D   +S
Sbjct:   203 LTKTIQASPRRKVARHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDEYDDS 262

Query:   248 EY-YNHLYSGTDFLEGEDEELSWFNAGVRXXXXXXXXXXXXXXXXXXMLVRTYQGTTRNF 306
             +      Y        ED +LSWFNAGVR                  +L+R+YQ TT N 
Sbjct:   263 DMKMAQRYYPEGMYVDEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQATTSNL 322

Query:   307 RRRLL 311
             RRR L
Sbjct:   323 RRRFL 327


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      311       293   0.00091  115 3  11 23  0.42    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  214 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.45u 0.11s 25.56t   Elapsed:  00:00:01
  Total cpu time:  25.45u 0.11s 25.56t   Elapsed:  00:00:01
  Start:  Fri May 10 00:03:23 2013   End:  Fri May 10 00:03:24 2013

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