Query 021536
Match_columns 311
No_of_seqs 222 out of 1366
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:46:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 7.7E-31 1.7E-35 252.7 27.0 201 106-306 46-255 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 6E-30 1.3E-34 240.6 25.5 199 108-306 1-201 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.2E-30 2.5E-35 246.9 12.1 202 106-307 14-223 (316)
4 KOG1443 Predicted integral mem 99.9 3.8E-21 8.2E-26 178.3 12.6 202 107-308 14-225 (349)
5 KOG1444 Nucleotide-sugar trans 99.8 7.8E-19 1.7E-23 164.3 18.3 191 113-303 16-210 (314)
6 TIGR00950 2A78 Carboxylate/Ami 99.8 1.6E-16 3.4E-21 145.3 22.9 173 126-304 6-182 (260)
7 PLN00411 nodulin MtN21 family 99.7 7.2E-16 1.6E-20 149.3 24.4 185 121-305 25-243 (358)
8 PRK11272 putative DMT superfam 99.7 1.8E-15 3.9E-20 142.1 25.4 174 126-304 25-201 (292)
9 PRK11689 aromatic amino acid e 99.7 1.4E-15 3.1E-20 143.0 23.2 163 112-284 11-188 (295)
10 PF08449 UAA: UAA transporter 99.7 2.3E-15 5E-20 142.2 22.5 176 125-302 16-206 (303)
11 PRK10532 threonine and homoser 99.7 2.4E-14 5.2E-19 134.5 23.7 168 126-304 29-199 (293)
12 PRK11453 O-acetylserine/cystei 99.7 2.7E-14 5.9E-19 134.4 23.9 183 110-305 9-199 (299)
13 PF06027 DUF914: Eukaryotic pr 99.6 3.2E-14 7E-19 136.4 21.6 185 124-308 28-224 (334)
14 PRK15430 putative chlorampheni 99.6 1.9E-13 4.1E-18 128.7 23.4 164 126-296 25-195 (296)
15 TIGR00688 rarD rarD protein. T 99.6 2.3E-13 5E-18 125.0 23.4 145 126-276 19-170 (256)
16 KOG1442 GDP-fucose transporter 99.5 4.9E-15 1.1E-19 136.1 5.3 196 107-302 26-237 (347)
17 TIGR03340 phn_DUF6 phosphonate 99.5 3.5E-12 7.7E-17 119.0 20.9 153 125-280 17-172 (281)
18 COG0697 RhaT Permeases of the 99.5 6.5E-11 1.4E-15 108.4 25.5 163 126-289 24-191 (292)
19 COG5070 VRG4 Nucleotide-sugar 99.4 6.7E-13 1.4E-17 119.1 11.2 187 115-305 12-210 (309)
20 PF00892 EamA: EamA-like trans 99.3 2.4E-11 5.3E-16 97.7 13.1 117 125-243 7-125 (126)
21 PF04142 Nuc_sug_transp: Nucle 99.3 1.6E-10 3.5E-15 106.5 17.0 142 170-311 15-175 (244)
22 COG5006 rhtA Threonine/homoser 99.2 2.2E-09 4.7E-14 98.2 18.8 184 110-308 18-204 (292)
23 KOG2765 Predicted membrane pro 99.2 5.9E-10 1.3E-14 106.7 14.2 130 174-303 161-302 (416)
24 TIGR00776 RhaT RhaT L-rhamnose 99.1 1E-08 2.2E-13 96.6 19.2 154 127-289 19-187 (290)
25 KOG1580 UDP-galactose transpor 99.1 3.9E-10 8.5E-15 102.2 8.7 160 135-297 50-219 (337)
26 KOG1581 UDP-galactose transpor 99.0 3.7E-08 7.9E-13 92.3 20.1 180 117-298 22-220 (327)
27 PF13536 EmrE: Multidrug resis 99.0 5E-09 1.1E-13 85.1 10.6 105 143-248 2-110 (113)
28 COG2510 Predicted membrane pro 98.9 1.5E-08 3.4E-13 83.9 11.0 130 110-243 7-138 (140)
29 KOG4510 Permease of the drug/m 98.9 4.1E-10 8.9E-15 103.7 1.4 178 112-294 42-233 (346)
30 KOG3912 Predicted integral mem 98.8 2.7E-07 5.9E-12 85.8 17.0 170 125-295 19-221 (372)
31 TIGR00950 2A78 Carboxylate/Ami 98.8 5.2E-07 1.1E-11 82.3 17.5 114 125-239 144-259 (260)
32 KOG1582 UDP-galactose transpor 98.8 2.5E-08 5.4E-13 92.2 8.1 176 123-301 57-241 (367)
33 COG2962 RarD Predicted permeas 98.7 6.3E-06 1.4E-10 77.2 20.7 157 126-290 24-184 (293)
34 PRK10532 threonine and homoser 98.6 3.5E-06 7.5E-11 79.3 18.1 117 125-244 164-281 (293)
35 PLN00411 nodulin MtN21 family 98.6 3.6E-06 7.7E-11 81.9 17.9 119 125-244 205-328 (358)
36 KOG2234 Predicted UDP-galactos 98.6 1.5E-05 3.3E-10 76.4 21.4 134 171-304 91-237 (345)
37 PRK11272 putative DMT superfam 98.5 7E-06 1.5E-10 77.1 16.8 119 126-246 167-287 (292)
38 PRK11689 aromatic amino acid e 98.5 7.3E-06 1.6E-10 77.1 16.4 115 125-244 172-287 (295)
39 KOG4314 Predicted carbohydrate 98.5 4.9E-07 1.1E-11 80.4 7.4 108 171-278 52-161 (290)
40 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.9E-05 4.1E-10 64.4 14.3 64 181-244 46-109 (111)
41 PRK11453 O-acetylserine/cystei 98.3 5.9E-05 1.3E-09 71.1 18.0 120 125-244 159-287 (299)
42 TIGR03340 phn_DUF6 phosphonate 98.1 1.4E-05 3E-10 74.6 9.8 67 175-241 214-280 (281)
43 TIGR00817 tpt Tpt phosphate/ph 98.1 2.6E-05 5.5E-10 73.4 11.6 120 124-244 160-293 (302)
44 PRK15430 putative chlorampheni 98.1 0.00013 2.9E-09 68.7 16.3 71 173-243 214-284 (296)
45 KOG1583 UDP-N-acetylglucosamin 98.1 3.6E-06 7.8E-11 78.3 4.8 165 127-295 21-209 (330)
46 PF03151 TPT: Triose-phosphate 98.1 0.0003 6.4E-09 59.1 16.1 123 121-243 12-152 (153)
47 COG0697 RhaT Permeases of the 98.0 0.00066 1.4E-08 61.9 17.9 117 125-245 170-288 (292)
48 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.00016 3.6E-09 68.1 13.4 128 106-243 152-287 (290)
49 PTZ00343 triose or hexose phos 97.8 0.0011 2.3E-08 64.2 16.8 121 123-243 208-347 (350)
50 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00024 5.3E-09 59.5 9.6 70 176-245 51-123 (129)
51 KOG2766 Predicted membrane pro 97.7 3.4E-06 7.4E-11 77.7 -2.3 176 126-306 35-219 (336)
52 PF03151 TPT: Triose-phosphate 97.5 0.0002 4.3E-09 60.1 6.2 56 253-308 1-63 (153)
53 PRK10452 multidrug efflux syst 97.4 0.0025 5.4E-08 52.8 11.4 69 176-244 34-103 (120)
54 PF06800 Sugar_transport: Suga 97.4 0.0091 2E-07 56.0 16.4 134 165-300 36-184 (269)
55 PRK09541 emrE multidrug efflux 97.4 0.0036 7.7E-08 51.0 11.2 67 178-244 36-103 (110)
56 PRK10650 multidrug efflux syst 97.3 0.0069 1.5E-07 49.3 12.4 68 175-242 38-106 (109)
57 COG5006 rhtA Threonine/homoser 97.3 0.0075 1.6E-07 55.9 13.6 115 124-240 163-278 (292)
58 PRK11431 multidrug efflux syst 97.2 0.0065 1.4E-07 49.1 11.3 68 176-243 33-101 (105)
59 COG2076 EmrE Membrane transpor 97.1 0.0071 1.5E-07 48.9 9.8 69 176-244 34-103 (106)
60 PF08449 UAA: UAA transporter 96.9 0.035 7.6E-07 52.4 14.9 130 115-244 160-297 (303)
61 PF06027 DUF914: Eukaryotic pr 96.8 0.065 1.4E-06 51.9 15.7 120 125-245 184-306 (334)
62 COG2962 RarD Predicted permeas 96.7 0.1 2.2E-06 49.3 16.1 128 115-244 153-283 (293)
63 PF00893 Multi_Drug_Res: Small 96.6 0.026 5.6E-07 44.4 9.4 55 181-235 38-93 (93)
64 PF06800 Sugar_transport: Suga 96.5 0.071 1.5E-06 50.1 13.6 72 168-240 192-267 (269)
65 TIGR00803 nst UDP-galactose tr 96.4 0.024 5.3E-07 50.9 9.8 83 196-278 2-111 (222)
66 PF04657 DUF606: Protein of un 96.1 0.37 7.9E-06 40.7 14.5 116 125-241 17-138 (138)
67 PF05653 Mg_trans_NIPA: Magnes 95.9 0.029 6.3E-07 53.4 7.6 68 176-243 53-121 (300)
68 PF10639 UPF0546: Uncharacteri 95.7 0.032 6.9E-07 45.7 6.2 70 172-242 42-112 (113)
69 KOG4510 Permease of the drug/m 95.3 0.026 5.5E-07 52.9 4.7 75 168-242 249-323 (346)
70 PRK13499 rhamnose-proton sympo 95.1 0.78 1.7E-05 44.7 14.7 103 167-269 68-191 (345)
71 TIGR00803 nst UDP-galactose tr 95.1 0.35 7.5E-06 43.4 11.5 65 177-241 157-221 (222)
72 TIGR00688 rarD rarD protein. T 94.2 1.9 4.1E-05 39.3 14.2 50 170-219 206-255 (256)
73 KOG1441 Glucose-6-phosphate/ph 93.3 0.32 7E-06 46.7 7.6 127 116-244 170-307 (316)
74 PRK13499 rhamnose-proton sympo 92.1 8.4 0.00018 37.6 15.8 72 174-246 262-343 (345)
75 COG3238 Uncharacterized protei 91.6 8.1 0.00018 33.2 13.8 118 125-243 21-145 (150)
76 KOG1581 UDP-galactose transpor 91.0 5 0.00011 38.5 12.4 74 168-241 237-310 (327)
77 KOG2922 Uncharacterized conser 89.6 0.2 4.3E-06 48.1 1.9 67 177-243 68-135 (335)
78 PF00892 EamA: EamA-like trans 86.1 0.89 1.9E-05 35.7 3.5 43 262-305 1-43 (126)
79 KOG1580 UDP-galactose transpor 84.6 1.7 3.7E-05 40.3 4.9 72 170-241 239-310 (337)
80 PF04342 DUF486: Protein of un 83.2 18 0.00038 29.4 9.6 61 182-242 45-106 (108)
81 COG4975 GlcU Putative glucose 80.2 1.4 2.9E-05 41.2 2.5 74 167-241 205-282 (288)
82 COG4975 GlcU Putative glucose 77.2 0.52 1.1E-05 43.8 -1.1 110 165-274 52-174 (288)
83 COG2510 Predicted membrane pro 76.0 12 0.00026 31.6 6.7 49 254-302 5-53 (140)
84 PF06379 RhaT: L-rhamnose-prot 74.6 89 0.0019 30.5 15.6 104 168-271 69-192 (344)
85 COG5070 VRG4 Nucleotide-sugar 74.5 56 0.0012 30.3 11.2 121 120-241 166-293 (309)
86 COG3169 Uncharacterized protei 73.8 45 0.00098 26.8 11.6 31 213-243 84-114 (116)
87 KOG1444 Nucleotide-sugar trans 73.7 35 0.00075 32.9 10.1 133 112-244 160-300 (314)
88 KOG2765 Predicted membrane pro 64.6 24 0.00052 34.9 7.1 62 186-247 332-393 (416)
89 PF04142 Nuc_sug_transp: Nucle 62.9 1.3E+02 0.0027 27.7 16.7 113 119-233 124-242 (244)
90 COG5373 Predicted membrane pro 55.3 2.5E+02 0.0054 30.8 13.0 25 193-217 221-245 (931)
91 PF09930 DUF2162: Predicted tr 47.0 2.3E+02 0.005 26.0 13.3 73 170-242 100-175 (224)
92 KOG4831 Unnamed protein [Funct 46.5 32 0.0007 28.1 3.9 70 172-242 53-123 (125)
93 KOG1442 GDP-fucose transporter 39.7 24 0.00052 33.7 2.6 134 109-243 184-326 (347)
94 PRK02237 hypothetical protein; 36.1 62 0.0013 26.4 4.1 36 209-244 70-105 (109)
95 KOG1582 UDP-galactose transpor 35.3 3.4E+02 0.0073 26.1 9.4 50 197-246 285-334 (367)
96 PF02694 UPF0060: Uncharacteri 34.5 59 0.0013 26.4 3.7 36 209-244 68-103 (107)
97 PF04657 DUF606: Protein of un 31.3 1.8E+02 0.0038 24.3 6.4 52 254-305 3-55 (138)
98 KOG1583 UDP-N-acetylglucosamin 28.0 2.3E+02 0.0049 27.2 7.0 37 207-243 277-313 (330)
99 PF08627 CRT-like: CRT-like; 27.2 1.6E+02 0.0035 24.7 5.2 39 106-144 54-93 (130)
100 PF11139 DUF2910: Protein of u 26.0 4.6E+02 0.01 23.1 11.9 38 205-242 159-209 (214)
101 PF02673 BacA: Bacitracin resi 22.7 6.3E+02 0.014 23.5 11.6 148 127-292 99-257 (259)
102 COG1742 Uncharacterized conser 20.1 1.2E+02 0.0025 24.7 3.0 36 210-245 70-105 (109)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=7.7e-31 Score=252.71 Aligned_cols=201 Identities=38% Similarity=0.677 Sum_probs=183.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHH
Q 021536 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHA 183 (311)
Q Consensus 106 ~~l~~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~--~~~~~~ll~lgvl~~ 183 (311)
+.+++..+|..||.+|+..+++||++++.+|+|++++++|++++++++.+.|..+.++.++++ +++++.++++|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999887766766555555553 468899999999998
Q ss_pred HHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHH
Q 021536 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS 263 (311)
Q Consensus 184 l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~ 263 (311)
..+...+.|+++++++++|++|+++|+|+++++++++|||++++++++++++++|+.+++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHhhhccC-------CCHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 021536 264 FTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVSKRK 306 (311)
Q Consensus 264 ~Al~~V~~Kkll~~-------~~~~~l~~y~~~~s~i~LlP~al~~E~~~ 306 (311)
+++|+++.||.+++ +++.+++.|+++++.++++|+.++.|+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~ 255 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKK 255 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999998863 66888999999999999999998888653
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=6e-30 Score=240.60 Aligned_cols=199 Identities=64% Similarity=1.095 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 021536 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV 187 (311)
Q Consensus 108 l~~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~ 187 (311)
+++..++.+||.+|+.++++||++++++++|+++++.|++++.+++.+.+..+.++++++++++++.+++.|++++.++.
T Consensus 1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999988776665544455566788999999999999989999
Q ss_pred HHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 021536 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR 267 (311)
Q Consensus 188 ~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~~Al~ 267 (311)
++|++++++++++++++++++|+++++++++++|||++++++++++++++|+.+...+|.++++.|++++++++++|++|
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~ 160 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR 160 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777788889999999999999999
Q ss_pred HHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 021536 268 SIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVSKRK 306 (311)
Q Consensus 268 ~V~~Kkll~--~~~~~~l~~y~~~~s~i~LlP~al~~E~~~ 306 (311)
+++.||.++ ++|+.+++.|++.++.++++|++...|+++
T Consensus 161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 201 (302)
T TIGR00817 161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPP 201 (302)
T ss_pred HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchH
Confidence 999999988 899999999999999999999998888643
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-30 Score=246.92 Aligned_cols=202 Identities=41% Similarity=0.620 Sum_probs=190.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHH
Q 021536 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID-SKLLKLLIPVAVCH 182 (311)
Q Consensus 106 ~~l~~~~~~~lw~~~si~~~i~nK~vl~--~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~-~~~~~~ll~lgvl~ 182 (311)
+.+..+.++..||.+|++.+++||++++ +||+|++++.+|++++.+..++.+..|..+..+++ +.+++.++++|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4788999999999999999999999999 89999999999999999988888888877766653 46899999999999
Q ss_pred HHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 021536 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (311)
Q Consensus 183 ~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l 262 (311)
+++++++|.|+.++++|++|++|+++|++++++++++.+|++++..++++++++.||.+++.+|.+||+.|++.++++++
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH-HHHHHhcCccc
Q 021536 263 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVSKRKL 307 (311)
Q Consensus 263 ~~Al~~V~~Kkll~----~~~~~~l~~y~~~~s~i~Ll-P~al~~E~~~~ 307 (311)
.++++++++|+.++ ++|++++++|++++++++++ |+....|+++.
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~ 223 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF 223 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce
Confidence 99999999999883 59999999999999999999 99898898775
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.85 E-value=3.8e-21 Score=178.35 Aligned_cols=202 Identities=19% Similarity=0.281 Sum_probs=178.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH-hcCC--C-CCCCCh-HHHHHHHHHHHH
Q 021536 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLP--K-RAPIDS-KLLKLLIPVAVC 181 (311)
Q Consensus 107 ~l~~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~-~~~~--~-~~~i~~-~~~~~ll~lgvl 181 (311)
+..+..++.+||++|+.+.+++|+.-..|++|.+++.+|+++-.++...... .+.+ + +..+++ ++.+.+.|.|++
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 5556667799999999999999999999999999999999988876543322 2211 1 223443 678889999999
Q ss_pred HHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 021536 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (311)
Q Consensus 182 ~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~ 261 (311)
-++.+.++|+|++|++++++++.|+..++|+.+++.+|.-||++|...+.++++.+|+.+..+++.+||..|+.+.++++
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccC-----CCHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 021536 262 ISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVSKRKLS 308 (311)
Q Consensus 262 l~~Al~~V~~Kkll~~-----~~~~~l~~y~~~~s~i~LlP~al~~E~~~~~ 308 (311)
++-++|..+.++++++ -+|+..+++.+++..+.++|..+.+||+...
T Consensus 174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~ 225 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLI 225 (349)
T ss_pred HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccc
Confidence 9999999999998864 4799999999999999999999999998753
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=7.8e-19 Score=164.34 Aligned_cols=191 Identities=20% Similarity=0.350 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 021536 113 FFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (311)
Q Consensus 113 ~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~--~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n 190 (311)
-.+.|...|+.+.+.||+++..++||..+.. .|.+++.+.+.+..+.|+.+.++++++..|.++|++++|.+....+.
T Consensus 16 sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~ 95 (314)
T KOG1444|consen 16 SALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGS 95 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcc
Confidence 3455668899999999999999999977766 89999999888887778888888999999999999999999999999
Q ss_pred HHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHH
Q 021536 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIY 270 (311)
Q Consensus 191 ~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~~Al~~V~ 270 (311)
.+++|+++++++++|..+|+++++.+.+++|.++++..|.++..+++|......+|.+||..|+.|++...++.+.+.++
T Consensus 96 ~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~ 175 (314)
T KOG1444|consen 96 KSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVY 175 (314)
T ss_pred ccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 021536 271 SKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVS 303 (311)
Q Consensus 271 ~Kkll~--~~~~~~l~~y~~~~s~i~LlP~al~~E 303 (311)
.||..+ +.+.+.+++|.++.+++.+....+++|
T Consensus 176 ~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~g 210 (314)
T KOG1444|consen 176 VKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITG 210 (314)
T ss_pred HHHhhccccccceeEEeehhHHHHHHHHHHHHHhc
Confidence 998774 688899999999999999888886665
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.76 E-value=1.6e-16 Score=145.26 Aligned_cols=173 Identities=15% Similarity=0.145 Sum_probs=142.6
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhhcHHHHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTHTI 204 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl-~~l~~~~~n~al~~vsvs~a~ii 204 (311)
+..|+.+++...|..+.+.|++++.+++.+....+ .++++++..+..|.+ +.+++.+.+.|+++++++.+.++
T Consensus 6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 46799988755589999999999888766544322 234566666667655 67888899999999999999999
Q ss_pred HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHhhhccCCC--HH
Q 021536 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMD--ST 281 (311)
Q Consensus 205 ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~-e~sf~~~G~llallS~l~~Al~~V~~Kkll~~~~--~~ 281 (311)
.+++|+++++++.+++|||++++++.+++++++|+.+.... +.+.+..|+.++++++++|+.++++.|+..++.+ +.
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~ 159 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL 159 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence 99999999999999999999999999999999999887543 3455678999999999999999999999887777 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q 021536 282 NIYAYISIIALFVCIPPAIIVSK 304 (311)
Q Consensus 282 ~l~~y~~~~s~i~LlP~al~~E~ 304 (311)
..+.+.+.++.++++|.....|.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~ 182 (260)
T TIGR00950 160 QFTGWVLLLGALLLLPFAWFLGP 182 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 55557788899989888776553
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.74 E-value=7.2e-16 Score=149.33 Aligned_cols=185 Identities=12% Similarity=0.078 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH-HhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcH
Q 021536 121 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 198 (311)
Q Consensus 121 si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~-~~~~-~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsv 198 (311)
...+.++.|..++.--+|..+.++|+.++.++++++. ..+. ++.++.+++++..+...|++....+.+.+++++|+++
T Consensus 25 ~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa 104 (358)
T PLN00411 25 VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNP 104 (358)
T ss_pred HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 3445567799988744588899999999988776442 2221 2223345677788888888775566789999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHH------hcccCChhHHHHHHHHHHhhhhhcc-ccc-----------------------c
Q 021536 199 SFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASL-TEL-----------------------S 248 (311)
Q Consensus 199 s~a~iika~~Pifv~lls~l~------lkek~s~~~~lsl~lii~GV~l~~~-~e~-----------------------s 248 (311)
+.+.++.+++|+|++++++++ +|||+++.+++++++.++|+.+... ++. +
T Consensus 105 ~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (358)
T PLN00411 105 TLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSN 184 (358)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCc
Confidence 999999999999999999999 6999999999999999999987543 111 1
Q ss_pred cc-HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH-HHHHHHHHHHHHHHHHHHHHhcCc
Q 021536 249 FN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAYISIIALFVCIPPAIIVSKR 305 (311)
Q Consensus 249 f~-~~G~llallS~l~~Al~~V~~Kkll~~~~~~-~l~~y~~~~s~i~LlP~al~~E~~ 305 (311)
.+ ..|+.++++|+++|++|++++|+..+++++. ..++|+..++.+.+.+++++.|..
T Consensus 185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~ 243 (358)
T PLN00411 185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN 243 (358)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 12 4599999999999999999999988888664 667777777777777777777753
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.73 E-value=1.8e-15 Score=142.05 Aligned_cols=174 Identities=17% Similarity=0.177 Sum_probs=140.7
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHh-hhhcHHHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSF-AAVAVSFTHT 203 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~-~l~~~~~n~al-~~vsvs~a~i 203 (311)
+..|..+++.+ |..++++|++++.+++++....+..+ ..++++++.....|++. ...+.+.+++. ++++++.+.+
T Consensus 25 ~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~ 101 (292)
T PRK11272 25 LVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAV 101 (292)
T ss_pred HHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 56799999887 99999999999988766543222111 23467788888888774 46677888898 9999999999
Q ss_pred HHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 021536 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN 282 (311)
Q Consensus 204 ika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~-e~sf~~~G~llallS~l~~Al~~V~~Kkll~~~~~~~ 282 (311)
+.++.|+++++++++ +|||++++++++++++++|+.+...+ +.+.+..|++++++++++|+.++++.||..++ ++..
T Consensus 102 l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~ 179 (292)
T PRK11272 102 VVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-VGMM 179 (292)
T ss_pred HHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-cchH
Confidence 999999999999986 69999999999999999999887543 34456789999999999999999999997543 4566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 021536 283 IYAYISIIALFVCIPPAIIVSK 304 (311)
Q Consensus 283 l~~y~~~~s~i~LlP~al~~E~ 304 (311)
...|+...+.+.+.++....|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~ 201 (292)
T PRK11272 180 AGAAEMLAAGVVLLIASLLSGE 201 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 7788888888888888766554
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.72 E-value=1.4e-15 Score=143.00 Aligned_cols=163 Identities=13% Similarity=0.106 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 021536 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (311)
Q Consensus 112 ~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~ 191 (311)
..+.+| ..++ +..|..++++| |..+.++|+.++.+++++.. +.+ +.+++.++.++..++.+...+.+.+.
T Consensus 11 ~a~~~W-g~~~---~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~ 80 (295)
T PRK11689 11 IAILLW-STMV---GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFP---RLRQFPKRYLLAGGLLFVSYEICLAL 80 (295)
T ss_pred HHHHHH-HHHH---HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--ccc---ccccccHHHHHHHhHHHHHHHHHHHH
Confidence 344455 4444 46799999998 99999999999988765432 111 22222334444444445566777777
Q ss_pred Hhhh----hcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc-----------cccHHHHHH
Q 021536 192 SFAA----VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------SFNWTGFIS 256 (311)
Q Consensus 192 al~~----vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~-----------sf~~~G~ll 256 (311)
++++ .+++.+.++.++.|+++.+++++++|||+++.+++++++.++|++++..++. +.+..|+++
T Consensus 81 a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~ 160 (295)
T PRK11689 81 SLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGL 160 (295)
T ss_pred HHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHH
Confidence 7754 5777888999999999999999999999999999999999999988765432 123569999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCHHHHH
Q 021536 257 AMISNISFTYRSIYSKKAMTDMDSTNIY 284 (311)
Q Consensus 257 allS~l~~Al~~V~~Kkll~~~~~~~l~ 284 (311)
+++++++|+.|+++.||..++.++...+
T Consensus 161 ~l~aa~~~A~~~v~~k~~~~~~~~~~~~ 188 (295)
T PRK11689 161 AFIGAFIWAAYCNVTRKYARGKNGITLF 188 (295)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCchhHH
Confidence 9999999999999999988888887653
No 10
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.71 E-value=2.3e-15 Score=142.16 Aligned_cols=176 Identities=19% Similarity=0.294 Sum_probs=145.9
Q ss_pred HHHHHHHHhc--C-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHH
Q 021536 125 NILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (311)
Q Consensus 125 ~i~nK~vl~~--f-p~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a 201 (311)
.++++++... . ++|+++++.|+++..+...+..... +.++.++..++..++.++++.+++.++|.|++|++.+..
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~ 93 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQ 93 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4556666654 2 3699999999999988765443221 112234456788899999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc----ccc------HHHHHHHHHHHHHHHHHHHHH
Q 021536 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----SFN------WTGFISAMISNISFTYRSIYS 271 (311)
Q Consensus 202 ~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~----sf~------~~G~llallS~l~~Al~~V~~ 271 (311)
+++|+..|+++++++++++|||+++.++++++++++|+++...+|. +.+ ..|+++.++|.++.+++.+++
T Consensus 94 ~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~q 173 (303)
T PF08449_consen 94 IVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQ 173 (303)
T ss_pred HHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875432 111 239999999999999999999
Q ss_pred hhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHh
Q 021536 272 KKAMT--DMDSTNIYAYISIIALFVCIPPAIIV 302 (311)
Q Consensus 272 Kkll~--~~~~~~l~~y~~~~s~i~LlP~al~~ 302 (311)
+|..+ +.++.+.++|++.++.+.+++.....
T Consensus 174 e~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l 206 (303)
T PF08449_consen 174 EKLFKKYGKSPWELMFYTNLFSLPFLLILLFLL 206 (303)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99885 67899999999999999998887763
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.67 E-value=2.4e-14 Score=134.53 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=132.0
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iik 205 (311)
.+.|+++++++ |..+.++|++++.+++++....+ +.+.++++++..+..|+++...+.+.++++++++++.+.++.
T Consensus 29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 36899999987 99999999999988776543211 123456788888888988777788889999999999999999
Q ss_pred hhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 021536 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN 282 (311)
Q Consensus 206 a~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~--e-~sf~~~G~llallS~l~~Al~~V~~Kkll~~~~~~~ 282 (311)
.+.|+++++++. |++... ..+.++++|+.++... + .+.+..|++++++++++|+.|.++.||..++.++..
T Consensus 105 ~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~ 178 (293)
T PRK10532 105 FTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPAT 178 (293)
T ss_pred HHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence 999999988773 565544 4466778999876432 2 234678999999999999999999999988888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 021536 283 IYAYISIIALFVCIPPAIIVSK 304 (311)
Q Consensus 283 l~~y~~~~s~i~LlP~al~~E~ 304 (311)
.. ++..++.+++.|+....+.
T Consensus 179 ~~-~~~~~~~~~l~~~~~~~~~ 199 (293)
T PRK10532 179 VA-IGSLIAALIFVPIGALQAG 199 (293)
T ss_pred HH-HHHHHHHHHHHHHHHHccC
Confidence 64 5667777888888776543
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.66 E-value=2.7e-14 Score=134.44 Aligned_cols=183 Identities=15% Similarity=0.263 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHH
Q 021536 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVT 188 (311)
Q Consensus 110 ~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~-l~~~~ 188 (311)
......+| ..+. +..|..+++++ |..+.++|+.++.+.+++... ++ +.+ ++.++..+++.. ....+
T Consensus 9 ~l~~~~~W-g~~~---~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~---~~--~~~---~~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 9 ALLVVVVW-GLNF---VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA---RP--KVP---LNLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHH-hhhH---HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc---CC--CCc---hHHHHHHHHHHHHHHHHH
Confidence 33344455 3333 45699999887 999999999987765443321 11 112 334445565533 33446
Q ss_pred HHHHhhh-hcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHHHHH
Q 021536 189 SNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISF 264 (311)
Q Consensus 189 ~n~al~~-vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e---~sf~~~G~llallS~l~~ 264 (311)
.+.++++ ++++.+.++.++.|+++.+++++++|||+++++++++++.++|+.+...++ .+.++.|+.++++++++|
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~ 155 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSW 155 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHH
Confidence 6778887 689999999999999999999999999999999999999999998876432 234567999999999999
Q ss_pred HHHHHHHhhhccCCC---HHHHHHHHHHHHHHHHHHHHHHhcCc
Q 021536 265 TYRSIYSKKAMTDMD---STNIYAYISIIALFVCIPPAIIVSKR 305 (311)
Q Consensus 265 Al~~V~~Kkll~~~~---~~~l~~y~~~~s~i~LlP~al~~E~~ 305 (311)
+.+++++||..++.+ ......++..++.+.+...+...|++
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGS 199 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999765433 33445566666555555555555653
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.64 E-value=3.2e-14 Score=136.35 Aligned_cols=185 Identities=10% Similarity=0.121 Sum_probs=145.0
Q ss_pred HHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHH
Q 021536 124 FNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200 (311)
Q Consensus 124 ~~i~nK~vl~~-fp~P~~lt~~r~~i~~llll~~~~~~--~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~ 200 (311)
.+..+.++-+. +..|.+.+++-++.-.++.......| ..+..+..+++|...+.+|++-..++++.+.|++|++++.
T Consensus 28 t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 28 TGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 34455555544 55687777665544333322222212 1111222234566666789999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc---------cccHHHHHHHHHHHHHHHHHHHHH
Q 021536 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIYS 271 (311)
Q Consensus 201 a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~---------sf~~~G~llallS~l~~Al~~V~~ 271 (311)
++++..+.-+|+++++++++|+|+++.+++|++++++|+++....|. +-...|++++++|++.|++++|+.
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~ 187 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE 187 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998765431 123789999999999999999999
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 021536 272 KKAMTDMDSTNIYAYISIIALFVCIPPAIIVSKRKLS 308 (311)
Q Consensus 272 Kkll~~~~~~~l~~y~~~~s~i~LlP~al~~E~~~~~ 308 (311)
++..++.+..+......+++.++..+...++|..++.
T Consensus 188 E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~ 224 (334)
T PF06027_consen 188 EKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIE 224 (334)
T ss_pred HHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhh
Confidence 9999999999999999999999999998889977654
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.61 E-value=1.9e-13 Score=128.67 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=119.2
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC----C-ChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAP----I-DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~----i-~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~ 200 (311)
++.|.. .+++ |..+.++|++++.+++.+....+ ++.+. . +++++...+..++....++.+.++++++++++.
T Consensus 25 ~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 101 (296)
T PRK15430 25 AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLE 101 (296)
T ss_pred HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 345875 5677 99999999999987655433221 11110 1 233333333333446678899999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHhhhccC--C
Q 021536 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--M 278 (311)
Q Consensus 201 a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~~Al~~V~~Kkll~~--~ 278 (311)
+.++.++.|+++++++++++|||++++++.+++++++|++++...+.+.. .++++++++|++|.++.|+...+ .
T Consensus 102 a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~ 177 (296)
T PRK15430 102 ASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAVEAQT 177 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999999999999999999999998764332222 46788999999999999997543 2
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 021536 279 DSTNIYAYISIIALFVCI 296 (311)
Q Consensus 279 ~~~~l~~y~~~~s~i~Ll 296 (311)
+......|+.+.+.+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~ 195 (296)
T PRK15430 178 GMLIETMWLLPVAAIYLF 195 (296)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 334445566666655543
No 15
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.61 E-value=2.3e-13 Score=124.98 Aligned_cols=145 Identities=12% Similarity=0.075 Sum_probs=111.6
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH-HhcCCC-----CCCCChH-HHHHHHHHHHHHHHHHHHHHHHhhhhcH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPIDSK-LLKLLIPVAVCHALGHVTSNVSFAAVAV 198 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~-~~~~~~-----~~~i~~~-~~~~ll~lgvl~~l~~~~~n~al~~vsv 198 (311)
++.|+ .++.+ |..+.++|++++.+++++.. ..+.++ .++.+++ .+..+...|++...+..+.++|++++++
T Consensus 19 ~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~ 96 (256)
T TIGR00688 19 YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSS 96 (256)
T ss_pred HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence 45787 45576 99999999999987654432 222111 0111222 2445666777777888999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 021536 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT 276 (311)
Q Consensus 199 s~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~~Al~~V~~Kkll~ 276 (311)
+.+.++.+++|+|+++++++++|||++++++++++++++|+++...++.+.+ .++++++++|+.|.+..|+..+
T Consensus 97 ~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 97 LEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999987754322222 3578899999999999998754
No 16
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=4.9e-15 Score=136.15 Aligned_cols=196 Identities=19% Similarity=0.305 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHHHHH-HHh-cC---CCCC--CCChHHHHHH
Q 021536 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVS-WAV-GL---PKRA--PIDSKLLKLL 175 (311)
Q Consensus 107 ~l~~~~~~~lw~~~si~~~i~nK~vl~~----fp~P~~lt~~r~~i~~llll~~-~~~-~~---~~~~--~i~~~~~~~l 175 (311)
..+.......+|.+++.+.+.||++++. .+-|.++++.|+++...+|+.. +.. +. ...+ +++.+.-+.+
T Consensus 26 ~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~v 105 (347)
T KOG1442|consen 26 AKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQV 105 (347)
T ss_pred hhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhh
Confidence 4456667778889999999999999985 5569999999999999888754 321 11 1112 3566778899
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc---ccccHH
Q 021536 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWT 252 (311)
Q Consensus 176 l~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e---~sf~~~ 252 (311)
+|+++.+.+++.+.|..++|++++++++=++++-+|+++++++++|+|-+.....+.++++.|--+-.-.| ..++|.
T Consensus 106 lplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~ 185 (347)
T KOG1442|consen 106 LPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWI 185 (347)
T ss_pred cchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999987766555 457899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHh
Q 021536 253 GFISAMISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAIIV 302 (311)
Q Consensus 253 G~llallS~l~~Al~~V~~Kkll~~~~--~~~l~~y~~~~s~i~LlP~al~~ 302 (311)
|.++++.|+++-|+..++.||.+...+ -+.+.+|+++.+.+..+|...+.
T Consensus 186 GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~ln 237 (347)
T KOG1442|consen 186 GVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILN 237 (347)
T ss_pred hhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999886554 36899999999999999987665
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.50 E-value=3.5e-12 Score=119.00 Aligned_cols=153 Identities=16% Similarity=0.175 Sum_probs=113.0
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~--~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ 202 (311)
++.+|...++-+ +. ..+++..+.+++++....+ ..+.++.+++.+..++..++....++.+.+.++++.+++.+.
T Consensus 17 ~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 93 (281)
T TIGR03340 17 NLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVY 93 (281)
T ss_pred HHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Confidence 456786666533 42 3555555555554433222 112222334445555555556778888999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCH
Q 021536 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS 280 (311)
Q Consensus 203 iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e-~sf~~~G~llallS~l~~Al~~V~~Kkll~~~~~ 280 (311)
.+.++.|+++++++++++||+++++++++++++++|+.+....+ .+.+..|+.++++++++|+.|+++.|+..++.++
T Consensus 94 ~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~ 172 (281)
T TIGR03340 94 PLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPA 172 (281)
T ss_pred hHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhc
Confidence 99999999999999999999999999999999999998876433 2345678889999999999999999987555444
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.45 E-value=6.5e-11 Score=108.35 Aligned_cols=163 Identities=17% Similarity=0.183 Sum_probs=119.4
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iik 205 (311)
...|...++...+....+.|++++.++.......+.....+..++.+...+..++.......+.+.++++++++.++++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (292)
T COG0697 24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII 103 (292)
T ss_pred HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 34566666533255666669988887633332211111111111223334444444667788999999999999999999
Q ss_pred hhhHHHHHHHHH-HHhcccCChhHHHHHHHHHHhhhhhccccccc---cHHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 021536 206 ALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSF---NWTGFISAMISNISFTYRSIYSKKAMTDMDST 281 (311)
Q Consensus 206 a~~Pifv~lls~-l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf---~~~G~llallS~l~~Al~~V~~Kkll~~~~~~ 281 (311)
++.|+++.++++ +++|||+++.++.+++.++.|+.++...+... +..|+.++++++++++++.++.|+.. +.++.
T Consensus 104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~ 182 (292)
T COG0697 104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPV 182 (292)
T ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChH
Confidence 999999999997 77799999999999999999999988755433 25899999999999999999999987 77777
Q ss_pred HHHH-HHHH
Q 021536 282 NIYA-YISI 289 (311)
Q Consensus 282 ~l~~-y~~~ 289 (311)
.... ++..
T Consensus 183 ~~~~~~~~~ 191 (292)
T COG0697 183 TLALLLQLL 191 (292)
T ss_pred HHHHHHHHH
Confidence 7776 5544
No 19
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.44 E-value=6.7e-13 Score=119.14 Aligned_cols=187 Identities=17% Similarity=0.232 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 021536 115 FMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVS 192 (311)
Q Consensus 115 ~lw~~~si~~~i~nK~vl~~--fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~a 192 (311)
..|.+.++.+++-||++++. |+-.+.+.+.|-+++.+-+.+....|..+. ...+.+.++|++++.+..+..+--+
T Consensus 12 lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKs 88 (309)
T COG5070 12 LSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKS 88 (309)
T ss_pred HHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccc
Confidence 45668899999999999985 555567788899988887666655554332 2345677889999988888888999
Q ss_pred hhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc--------cccHHHHHHHHHHHHHH
Q 021536 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISF 264 (311)
Q Consensus 193 l~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~--------sf~~~G~llallS~l~~ 264 (311)
++|.+++.+++.|.++.+.++..+.+++|.+.+.....+.++++...+.+.++|. .+| .|++|+...+++.
T Consensus 89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclss 167 (309)
T COG5070 89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSS 167 (309)
T ss_pred eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhH
Confidence 9999999999999999999999999999999999999999999999999888875 456 5999999999999
Q ss_pred HHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 021536 265 TYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVSKR 305 (311)
Q Consensus 265 Al~~V~~Kkll--~~~~~~~l~~y~~~~s~i~LlP~al~~E~~ 305 (311)
+.+-...||.. .+....+.++|.++.++.+++.+.+++|..
T Consensus 168 aafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edw 210 (309)
T COG5070 168 AAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDW 210 (309)
T ss_pred HHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccC
Confidence 99988888754 356678899999999999999999999853
No 20
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.34 E-value=2.4e-11 Score=97.71 Aligned_cols=117 Identities=16% Similarity=0.299 Sum_probs=98.1
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhhcHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~~~~i~~~~~~~ll~lgvl-~~l~~~~~n~al~~vsvs~a~ 202 (311)
.+++|+..++++ |....++|+.++.+ +++. ...+..+..+.+.+++...+..+++ ..+++.+.+.++++++++.++
T Consensus 7 ~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 84 (126)
T PF00892_consen 7 SVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS 84 (126)
T ss_pred HHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence 457899999987 99999999999987 4332 2222122245667778888888887 578899999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 203 iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
++.+++|+++.+++++++||++++.++++++++++|+++..
T Consensus 85 ~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 85 ILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998764
No 21
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.29 E-value=1.6e-10 Score=106.52 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc--
Q 021536 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-- 247 (311)
Q Consensus 170 ~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~-- 247 (311)
++.......+++|.+.+.+.+.++++++++.+|+++++..+++++++++++|+|.+..+|+++++.++|+++...++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 445567778889999999999999999999999999999999999999999999999999999999999998754210
Q ss_pred -------c--------ccHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhcCcccccC
Q 021536 248 -------S--------FNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVSKRKLSDH 310 (311)
Q Consensus 248 -------s--------f~~~G~llallS~l~~Al~~V~~Kkll~~--~~~~~l~~y~~~~s~i~LlP~al~~E~~~~~~~ 310 (311)
+ -.+.|+.+.++++++.++..|+.+|.+++ .+.+........+|.++.+....+.|+.+..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence 1 12589999999999999999999998874 455566666677777777777666666665554
Q ss_pred C
Q 021536 311 S 311 (311)
Q Consensus 311 ~ 311 (311)
|
T Consensus 175 g 175 (244)
T PF04142_consen 175 G 175 (244)
T ss_pred C
Confidence 4
No 22
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.19 E-value=2.2e-09 Score=98.24 Aligned_cols=184 Identities=15% Similarity=0.129 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 021536 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS 189 (311)
Q Consensus 110 ~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~ 189 (311)
.+..+.++.+.++ .|.++..+. |.-++.+|..++.++++..++ +.+.++++++|+.++..|+.....+.++
T Consensus 18 l~amvsiq~Gas~-----Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~F 88 (292)
T COG5006 18 LVAMVSIQSGASF-----AKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLF 88 (292)
T ss_pred HHHHHHHHhhHHH-----HHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHH
Confidence 3344445544443 588888777 899999999999998776653 2334678899999999999998899999
Q ss_pred HHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc---cccccHHHHHHHHHHHHHHHH
Q 021536 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---ELSFNWTGFISAMISNISFTY 266 (311)
Q Consensus 190 n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~---e~sf~~~G~llallS~l~~Al 266 (311)
+.|++.++.+.+..+-++-|+.+++++ .+|..-..| +.+.+.|+.+.... ..+.|..|..+++.+..||+.
T Consensus 89 Y~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~ 162 (292)
T COG5006 89 YLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWAL 162 (292)
T ss_pred HHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHH
Confidence 999999999999999999999877654 344444444 45577788765432 246789999999999999999
Q ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 021536 267 RSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVSKRKLS 308 (311)
Q Consensus 267 ~~V~~Kkll~~~~~~~l~~y~~~~s~i~LlP~al~~E~~~~~ 308 (311)
|.+..||.-+..+...-+.+-+.++.++.+|+....-++.+.
T Consensus 163 YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~ 204 (292)
T COG5006 163 YIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALF 204 (292)
T ss_pred HHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhc
Confidence 999999988777888888899999999999998766555543
No 23
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.16 E-value=5.9e-10 Score=106.73 Aligned_cols=130 Identities=19% Similarity=0.329 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc------
Q 021536 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL------ 247 (311)
Q Consensus 174 ~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~------ 247 (311)
.-+....+....++++|.|+.+++++..+++.++.-+|+..++.++..||+++.+.+++++.++||+++..++.
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~ 240 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL 240 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC
Confidence 34444445567888999999999999999999999999999999999999999999999999999999876632
Q ss_pred --cccHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 021536 248 --SFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVS 303 (311)
Q Consensus 248 --sf~~~G~llallS~l~~Al~~V~~Kkll~----~~~~~~l~~y~~~~s~i~LlP~al~~E 303 (311)
+-...|.+++++|++.|++|.++.||... ++|--.+..|.-++.++++.|..++.+
T Consensus 241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~ 302 (416)
T KOG2765|consen 241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD 302 (416)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 22378999999999999999999998774 567778889999999999998877764
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.09 E-value=1e-08 Score=96.59 Aligned_cols=154 Identities=19% Similarity=0.202 Sum_probs=114.0
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHH
Q 021536 127 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPID-SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (311)
Q Consensus 127 ~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~~~~i~-~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ii 204 (311)
..|++. .++.++.+ |+.++.+++... ...+. ++.+ ++.+..-+.-|++...++++++.+.++++++.+..+
T Consensus 19 ~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i 91 (290)
T TIGR00776 19 INVKIG-GGPYSQTL---GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPI 91 (290)
T ss_pred HHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHH
Confidence 446654 45533332 677777655432 22221 1222 344555556666788889999999999999999888
Q ss_pred Hh-hhHHHHHHHHHHHhcccCChhH----HHHHHHHHHhhhhhcccccc-------cc-HHHHHHHHHHHHHHHHHHHHH
Q 021536 205 KA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFISAMISNISFTYRSIYS 271 (311)
Q Consensus 205 ka-~~Pifv~lls~l~lkek~s~~~----~lsl~lii~GV~l~~~~e~s-------f~-~~G~llallS~l~~Al~~V~~ 271 (311)
-+ +.++++.+.+.+++||+.++.+ +++++++++|+.+....+.+ .| ..|++++++|+++|+.|.+..
T Consensus 92 ~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~ 171 (290)
T TIGR00776 92 STGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVA 171 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 88 8888999999999999999999 99999999999887542211 33 689999999999999999999
Q ss_pred hhhccCCCHHHHHHHHHH
Q 021536 272 KKAMTDMDSTNIYAYISI 289 (311)
Q Consensus 272 Kkll~~~~~~~l~~y~~~ 289 (311)
|+. ++||.+..+++..
T Consensus 172 ~~~--~~~~~~~~~~~~~ 187 (290)
T TIGR00776 172 KAF--GVDGLSVLLPQAI 187 (290)
T ss_pred HHc--CCCcceehhHHHH
Confidence 986 4888887444443
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.08 E-value=3.9e-10 Score=102.20 Aligned_cols=160 Identities=14% Similarity=0.157 Sum_probs=131.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHH
Q 021536 135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA 214 (311)
Q Consensus 135 fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~l 214 (311)
|.+...+.++|+.+..++.-+... ++++.++|+..-+.....++-|.+.++.+|.++++++-+...+-|+..|+-+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 778899999999999887643332 234445555444556678888999999999999999999999999999999999
Q ss_pred HHHHHhcccCChhHHHHHHHHHHhhhhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHH
Q 021536 215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIY 284 (311)
Q Consensus 215 ls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~--------sf~~~G~llallS~l~~Al~~V~~Kkll~~--~~~~~l~ 284 (311)
++.++.+++++|+++++++++++||++..+.|. ++ -.|-++.++|--..++....+.+.... -+...++
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~-g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM 206 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTF-GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMM 206 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCccccc-chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhH
Confidence 999999999999999999999999999887542 22 368889999988888888888876643 4667899
Q ss_pred HHHHHHHHHHHHH
Q 021536 285 AYISIIALFVCIP 297 (311)
Q Consensus 285 ~y~~~~s~i~LlP 297 (311)
.|+++++.+.+-.
T Consensus 207 ~~~NlwStL~Lg~ 219 (337)
T KOG1580|consen 207 FYTNLWSTLYLGA 219 (337)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987753
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.04 E-value=3.7e-08 Score=92.31 Aligned_cols=180 Identities=12% Similarity=0.085 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 021536 117 WYFLNVIFNILNKRIYN--------YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (311)
Q Consensus 117 w~~~si~~~i~nK~vl~--------~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~ 188 (311)
-|+.-+...++...+.. +|.+|.++.+.|-+++.++-..... ..+.+...++.|.....+++...++.++
T Consensus 22 I~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~k~~~~~~apl~~y~~is~tn~~s~~~ 99 (327)
T KOG1581|consen 22 IYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK--WWKKELSGVAPLYKYSLISFTNTLSSWC 99 (327)
T ss_pred HHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh--cccccCCCCCchhHHhHHHHHhhcchHH
Confidence 33444555555555443 2778999999998888876543221 1222223345678888899999999999
Q ss_pred HHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc---c-----c-cccHHHHHHHHH
Q 021536 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---E-----L-SFNWTGFISAMI 259 (311)
Q Consensus 189 ~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~---e-----~-sf~~~G~llall 259 (311)
++-|++|++-+...+-|+.--+-++++..++.|+|+++.+++...++..||.+.... + . ...+.|+.++..
T Consensus 100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~ 179 (327)
T KOG1581|consen 100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFG 179 (327)
T ss_pred HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887542 1 1 235789999999
Q ss_pred HHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHH
Q 021536 260 SNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPP 298 (311)
Q Consensus 260 S~l~~Al~~V~~Kkll~--~~~~~~l~~y~~~~s~i~LlP~ 298 (311)
+-+..++.+..++++.+ ++++.++++|.++++.+.....
T Consensus 180 ~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~ 220 (327)
T KOG1581|consen 180 YLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY 220 (327)
T ss_pred HHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh
Confidence 99999999999999886 6899999999999999876544
No 27
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.98 E-value=5e-09 Score=85.09 Aligned_cols=105 Identities=19% Similarity=0.306 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHH-HHhcCCC--CCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHH
Q 021536 143 VIHLLVGVVYCLVS-WAVGLPK--RAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF 218 (311)
Q Consensus 143 ~~r~~i~~llll~~-~~~~~~~--~~~i~~~~~~~ll~lgvl~~-l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l 218 (311)
.+|+.++.+++... ...+..+ .+.++++.+..+...|++.. .+..+.++|+++.+ +....+.+++|+|+++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777765533 2221111 01122344566666777754 78889999999999 58889999999999999999
Q ss_pred HhcccCChhHHHHHHHHHHhhhhhcccccc
Q 021536 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (311)
Q Consensus 219 ~lkek~s~~~~lsl~lii~GV~l~~~~e~s 248 (311)
++|||+++.++.+++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999998876643
No 28
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.91 E-value=1.5e-08 Score=83.88 Aligned_cols=130 Identities=19% Similarity=0.249 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCC-CCCCChHHHHHHHHHHHHHHHHHH
Q 021536 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPK-RAPIDSKLLKLLIPVAVCHALGHV 187 (311)
Q Consensus 110 ~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~-~~~i~~~~~~~ll~lgvl~~l~~~ 187 (311)
.+.+-++.+... .++.|..+++.+ |.+-+++|-.+..+++... ...|..+ ...++.+.|..+..-|+.-.++-.
T Consensus 7 ~ALLsA~fa~L~---~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 7 YALLSALFAGLT---PIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHH---HHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 334444444433 467899999886 9999999998888776533 3333211 123577888888888877778888
Q ss_pred HHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 188 ~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+++.+++.-.+|...=+-.+.|+++++++++++|||++..+|+|.+++++|+++.+
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999999999999998865
No 29
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.90 E-value=4.1e-10 Score=103.70 Aligned_cols=178 Identities=16% Similarity=0.125 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 021536 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (311)
Q Consensus 112 ~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~ 191 (311)
+.... |++|.++.+..|.+.+ +|..+...|+++-.++.+++.......- --+..+.+.+++-|+..+.+....++
T Consensus 42 l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~~LiLRg~mG~tgvmlmyy 116 (346)
T KOG4510|consen 42 LLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRKWLILRGFMGFTGVMLMYY 116 (346)
T ss_pred ehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEEEEEeehhhhhhHHHHHHH
Confidence 33344 5677777777776554 5888888887666665554432111100 00112234566778777777888899
Q ss_pred HhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc-----cc------c---cccHHHHHHH
Q 021536 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-----TE------L---SFNWTGFISA 257 (311)
Q Consensus 192 al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~-----~e------~---sf~~~G~lla 257 (311)
|++|.+.+.+.+|..++|+|+.++++.++||+++....++..+.+.||+++.. +| . +-+..|...+
T Consensus 117 a~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aa 196 (346)
T KOG4510|consen 117 ALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAA 196 (346)
T ss_pred HHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHH
Confidence 99999999999999999999999999999999999999999999999999753 11 1 1235677777
Q ss_pred HHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Q 021536 258 MISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFV 294 (311)
Q Consensus 258 llS~l~~Al~~V~~Kkll~~~~~~~l~~y~~~~s~i~ 294 (311)
+.+++.-+.--++.|++-++.+.+-...|...++++.
T Consensus 197 i~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~ 233 (346)
T KOG4510|consen 197 ISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVV 233 (346)
T ss_pred HHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHH
Confidence 7777777766667777767776665555555555543
No 30
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.82 E-value=2.7e-07 Score=85.82 Aligned_cols=170 Identities=18% Similarity=0.291 Sum_probs=129.1
Q ss_pred HHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHH-HHHhcCCC-CC-------CCChH-----HHHHHHHHHHHHH
Q 021536 125 NILNKRIYNY-------FPYPYFVSVIHLLVGVVYCLV-SWAVGLPK-RA-------PIDSK-----LLKLLIPVAVCHA 183 (311)
Q Consensus 125 ~i~nK~vl~~-------fp~P~~lt~~r~~i~~llll~-~~~~~~~~-~~-------~i~~~-----~~~~ll~lgvl~~ 183 (311)
++..||.-+- |.+|+..+ .-++.|-..|+. +...+.+. .+ .+..+ +-+.+++.++|-.
T Consensus 19 tl~aKwadsi~~eg~pgfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di 97 (372)
T KOG3912|consen 19 TLVAKWADSIQAEGSPGFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDI 97 (372)
T ss_pred HHHHHHHHhhhhhCCCccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHH
Confidence 4677887541 66786654 445555544442 22222111 00 11111 2356778899988
Q ss_pred HHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc----------cccHHH
Q 021536 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----------SFNWTG 253 (311)
Q Consensus 184 l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~----------sf~~~G 253 (311)
.+..+-+.++.+++++.+|+++...-+|+.+++.-+++++++..+|+++..+++|++.+.+.|. +--..|
T Consensus 98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitG 177 (372)
T KOG3912|consen 98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITG 177 (372)
T ss_pred hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhh
Confidence 8888889999999999999999999999999999999999999999999999999998765431 222689
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHH
Q 021536 254 FISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVC 295 (311)
Q Consensus 254 ~llallS~l~~Al~~V~~Kkll~--~~~~~~l~~y~~~~s~i~L 295 (311)
+++.+.+-+.-+.+.++.+|.++ +++|.+...|.-++++.++
T Consensus 178 dllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~ 221 (372)
T KOG3912|consen 178 DLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVIL 221 (372)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHH
Confidence 99999999999999999888775 6899999999999986644
No 31
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.77 E-value=5.2e-07 Score=82.34 Aligned_cols=114 Identities=20% Similarity=0.125 Sum_probs=88.9
Q ss_pred HHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhhcHHHHH
Q 021536 125 NILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 125 ~i~nK~vl~~fp-~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl-~~l~~~~~n~al~~vsvs~a~ 202 (311)
.++.|+..++.+ .+.....+++.++.+++++..... .+....+.++|..++..+++ ..++..+++.++++.+++.+.
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s 222 (260)
T TIGR00950 144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAAS 222 (260)
T ss_pred HHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 356788887654 234555578888887766543322 12223356677777777777 457888999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhh
Q 021536 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239 (311)
Q Consensus 203 iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV 239 (311)
++.+++|+++++++++++||+++..++.+.++++.|+
T Consensus 223 ~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 223 ILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999986
No 32
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.76 E-value=2.5e-08 Score=92.24 Aligned_cols=176 Identities=15% Similarity=0.212 Sum_probs=137.2
Q ss_pred HHHHHHHHHHhc--CC-chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHH
Q 021536 123 IFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (311)
Q Consensus 123 ~~~i~nK~vl~~--fp-~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs 199 (311)
....+..++++. |. +-|.+++.|+++=..+.++-. ..+..+++ ..-|+....++.+....|.++|-|+.|.+-+
T Consensus 57 ~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~-~~~~~k~r--~iP~rtY~~la~~t~gtmGLsn~SlgYLNYP 133 (367)
T KOG1582|consen 57 VYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL-QLIQTKRR--VIPWRTYVILAFLTVGTMGLSNGSLGYLNYP 133 (367)
T ss_pred HHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE-Eeecccce--ecchhHhhhhHhhhhhccccCcCccccccCc
Confidence 334566777764 54 789999999987655433211 11222221 1236777778888778899999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc----ccccHHHHHHHHHHHHHHHHHHHHHhhhc
Q 021536 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGFISAMISNISFTYRSIYSKKAM 275 (311)
Q Consensus 200 ~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e----~sf~~~G~llallS~l~~Al~~V~~Kkll 275 (311)
...+.|.+--+-+++.+.++-++|+++..+.+..+..+|+++....| .+||..|+++.-.+-++.|+-.-.+.|.+
T Consensus 134 tQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m 213 (367)
T KOG1582|consen 134 TQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAM 213 (367)
T ss_pred HHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999988899999999999999999999999999999987654 57899999999999999998766777666
Q ss_pred c--CCCHHHHHHHHHHHHHHHHHHHHHH
Q 021536 276 T--DMDSTNIYAYISIIALFVCIPPAII 301 (311)
Q Consensus 276 ~--~~~~~~l~~y~~~~s~i~LlP~al~ 301 (311)
+ +-++.++.+|...+++++++.+...
T Consensus 214 ~~~~~ss~EmvfySy~iG~vflf~~mvl 241 (367)
T KOG1582|consen 214 KMNPASSSEMVFYSYGIGFVFLFAPMVL 241 (367)
T ss_pred hhCCCCcceEEEeeecccHHHHHHHHHh
Confidence 5 4566888999999999888766543
No 33
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.65 E-value=6.3e-06 Score=77.16 Aligned_cols=157 Identities=15% Similarity=0.159 Sum_probs=107.3
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH-HhcCCCC---CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKR---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~-~~~~~~~---~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a 201 (311)
++-|.+ ++.| +..+...|...+..+++... ..|..+. ..-+++.+..+...+++-+.+-+.+.+|..+-.+=.+
T Consensus 24 ~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~lea 101 (293)
T COG2962 24 LYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEA 101 (293)
T ss_pred HHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHH
Confidence 455654 5566 88999999998888764322 2111110 0012234555555555555666677777777555555
Q ss_pred HHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 021536 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST 281 (311)
Q Consensus 202 ~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~sf~~~G~llallS~l~~Al~~V~~Kkll~~~~~~ 281 (311)
+.=-...|++.++++.+|+|||+++.+++++++..+||..-.....++.|..+.+ +++|++|...-|+. ++|+.
T Consensus 102 SLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK~~--~v~a~ 175 (293)
T COG2962 102 SLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRKKL--KVDAL 175 (293)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHHhc--CCchH
Confidence 5556789999999999999999999999999999999988776666788766554 57789999887764 56665
Q ss_pred HHHHHHHHH
Q 021536 282 NIYAYISII 290 (311)
Q Consensus 282 ~l~~y~~~~ 290 (311)
+-...-.++
T Consensus 176 ~g~~lE~l~ 184 (293)
T COG2962 176 TGLTLETLL 184 (293)
T ss_pred HhHHHHHHH
Confidence 554444333
No 34
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.61 E-value=3.5e-06 Score=79.26 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=86.7
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHhhhhcHHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTHT 203 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~-~l~~~~~n~al~~vsvs~a~i 203 (311)
+++.|+..++.+ |.... +...++.+++.+...... .....+...+...+.++++. .+++.++|+++++++++.+++
T Consensus 164 ~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 164 ILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQA-GEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred HHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHcc-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 356677766655 66654 445555555443322111 11223445565566777774 467889999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 204 ika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+..++|++..++++++++|++++.+++|.+++++|++....
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988753
No 35
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.58 E-value=3.6e-06 Score=81.92 Aligned_cols=119 Identities=14% Similarity=0.143 Sum_probs=87.0
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCC-C----CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPK-R----APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~-~----~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs 199 (311)
+++.|....++|.+...+++++.++.+.+.+........ . ...+...+ .++..+++-.+++++.|+++++++++
T Consensus 205 ~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~ 283 (358)
T PLN00411 205 FILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPL 283 (358)
T ss_pred HHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCch
Confidence 356777777787566777788887776654322211111 0 11222222 24444444446778899999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 200 ~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
.+.+...++|++.+++++++++|++++.+++|.+++++|+.++..
T Consensus 284 ~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 284 YLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998764
No 36
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.5e-05 Score=76.38 Aligned_cols=134 Identities=13% Similarity=0.196 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc----
Q 021536 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---- 246 (311)
Q Consensus 171 ~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e---- 246 (311)
+...+...+++|++.+-+.++++.+.+++.+++...+.-+.+++++.+++++|.++.+|.++++.++|+.+...++
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 3445666777899888799999999999999999999999999999999999999999999999999999986211
Q ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 021536 247 -------LSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVSK 304 (311)
Q Consensus 247 -------~sf~~~G~llallS~l~~Al~~V~~Kkll~--~~~~~~l~~y~~~~s~i~LlP~al~~E~ 304 (311)
.+-.+.|+...+.++++.++-.+|..|.++ +.+.+...--...++.++.+.-.+..|+
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~ 237 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDG 237 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 112378999999999999999999999885 3444433333445555544444333343
No 37
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.49 E-value=7e-06 Score=77.11 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhhcHHHHHH
Q 021536 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTHT 203 (311)
Q Consensus 126 i~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~~~~i~~~~~~~ll~lgvl-~~l~~~~~n~al~~vsvs~a~i 203 (311)
+.+|..-+. ++...+.+++.++.+++.+. ...+.......+.+.|..++..+++ ..+++.+++.++++++++...+
T Consensus 167 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 167 VWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred HHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 456665332 35566778888887765543 2221111111245677777888876 4577889999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc
Q 021536 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (311)
Q Consensus 204 ika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e 246 (311)
+..++|++.++++++++||++++.+++|.++++.|+.+....+
T Consensus 245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876443
No 38
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.47 E-value=7.3e-06 Score=77.13 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=83.5
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~-~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~i 203 (311)
++++|+.-++.+ |.... ... +.+.+.+ ....+ ......+.+.|..++..++...+++++.+.++++.+++.+++
T Consensus 172 ~v~~k~~~~~~~-~~~~~--~~~-~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~ 246 (295)
T PRK11689 172 CNVTRKYARGKN-GITLF--FIL-TALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLAT 246 (295)
T ss_pred HHHHhhccCCCC-chhHH--HHH-HHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 356777655554 65432 222 2232222 22212 111234556777777777656678899999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 204 ika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+.+++|++.+++++++++|+++..++++.++++.|+.+...
T Consensus 247 ~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 247 ASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999999999999999987643
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.46 E-value=4.9e-07 Score=80.42 Aligned_cols=108 Identities=13% Similarity=0.090 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc--cc
Q 021536 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--LS 248 (311)
Q Consensus 171 ~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e--~s 248 (311)
..+...|.+++.++.++.+..++++++++.++-+.+..-.|+.+++++.+|+++...++++.++.+.|++++++.| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 3455667888888888999999999999999999999999999999999999999999999999999999998754 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 021536 249 FNWTGFISAMISNISFTYRSIYSKKAMTDM 278 (311)
Q Consensus 249 f~~~G~llallS~l~~Al~~V~~Kkll~~~ 278 (311)
.++.|+.+++.|++..++|.|+.|+...+-
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 569999999999999999999999987643
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.37 E-value=1.9e-05 Score=64.38 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 181 l~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
++....++...++++++++.+..+-++.++++++++++++||++++.+++++.++++|+++...
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3667888899999999999999999999999999999999999999999999999999988653
No 41
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.30 E-value=5.9e-05 Score=71.07 Aligned_cols=120 Identities=18% Similarity=0.211 Sum_probs=86.6
Q ss_pred HHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHH-HHhcCCC-----CCCCChHHHHHHHHHHHHH-HHHHHHHHHHhhh
Q 021536 125 NILNKRIYNYFPYP--YFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAA 195 (311)
Q Consensus 125 ~i~nK~vl~~fp~P--~~lt~~r~~i~~llll~~-~~~~~~~-----~~~i~~~~~~~ll~lgvl~-~l~~~~~n~al~~ 195 (311)
+++.|...++.+.| .....+.++.+.+.+... ....-.. ....+.+.|..++.++++- .+++.+.+.++++
T Consensus 159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~ 238 (299)
T PRK11453 159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR 238 (299)
T ss_pred HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667765554433 344455555554433221 2111111 1134566788888888764 4678899999999
Q ss_pred hcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 196 vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
.++..+.++..++|++..++++++++|+++..+++|.+++++|+.+...
T Consensus 239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999988654
No 42
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.13 E-value=1.4e-05 Score=74.61 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhh
Q 021536 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 175 ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l 241 (311)
....++...+++.+.+.++++.+++.+..+.+++|++..+++++++||++++.+++|.+++++|+.+
T Consensus 214 ~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 214 ATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3333344567888999999999999999999999999999999999999999999999999999975
No 43
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.13 E-value=2.6e-05 Score=73.42 Aligned_cols=120 Identities=10% Similarity=0.070 Sum_probs=83.9
Q ss_pred HHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHH-hcCCCCCC---------CChH-HHHHHHHHHH-HHHHHHHHH
Q 021536 124 FNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP---------IDSK-LLKLLIPVAV-CHALGHVTS 189 (311)
Q Consensus 124 ~~i~nK~vl~--~fp~P~~lt~~r~~i~~llll~~~~-~~~~~~~~---------i~~~-~~~~ll~lgv-l~~l~~~~~ 189 (311)
..++.|...+ +++ |+.++.+++..+.+++++... ........ .... .+...+..++ ++...+.+.
T Consensus 160 ~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T TIGR00817 160 RNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVA 238 (302)
T ss_pred HHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3467787776 554 888999999888877665432 11101000 0000 1111222222 233334566
Q ss_pred HHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 190 n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+.+++++++..+++....+|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 239 ~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999988754
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.12 E-value=0.00013 Score=68.65 Aligned_cols=71 Identities=10% Similarity=0.103 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 173 ~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
..++..++...+.+++.+.++++.+++.++.+...+|++..++++++++|++++.++.+.+++++|+.+..
T Consensus 214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34444555566789999999999999999999999999999999999999999999999999988887654
No 45
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.09 E-value=3.6e-06 Score=78.26 Aligned_cols=165 Identities=15% Similarity=0.194 Sum_probs=120.8
Q ss_pred HHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHH
Q 021536 127 LNKRIYNYFPY-PYFVSVIHLLVGVVYCLVSWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHT 203 (311)
Q Consensus 127 ~nK~vl~~fp~-P~~lt~~r~~i~~llll~~~~~~~-~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~-vsvs~a~i 203 (311)
.-..+.+..|. -..+++.|+++-..--++... ++ ..+++++.+++.. .+ ..|...++++|.++++ ++.+..-+
T Consensus 21 ~lE~L~~~~pgsgNLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i--~V-~mFF~vnv~NN~al~f~I~~PlHiI 96 (330)
T KOG1583|consen 21 FLELLVRNEPGSGNLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAI--TV-AMFFIVNVTNNYALKFNIPMPLHII 96 (330)
T ss_pred HHHHHHHhCCCCeeehHHHHHHHHHHhceeeec-cccccCCCCchhhhhe--eh-heeeeeeeeccceeeecccceEEEE
Confidence 34555555553 357888899877765544321 21 1235566554432 23 3455667889999987 79999999
Q ss_pred HHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc---ccc--------------ccc--HHHHHHHHHHHHHH
Q 021536 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL---TEL--------------SFN--WTGFISAMISNISF 264 (311)
Q Consensus 204 ika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~---~e~--------------sf~--~~G~llallS~l~~ 264 (311)
+++..++.+++++++++|+|++..++.+++++.+|+++... .|. ++- ..|+.+...+.+.-
T Consensus 97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS 176 (330)
T ss_pred EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998753 111 111 36888888899999
Q ss_pred HHHHHHHhhhccC--CCHHHHHHHHHHHHHHHH
Q 021536 265 TYRSIYSKKAMTD--MDSTNIYAYISIIALFVC 295 (311)
Q Consensus 265 Al~~V~~Kkll~~--~~~~~l~~y~~~~s~i~L 295 (311)
|.-.++++..-++ -++-+.++|....++..+
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~F 209 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLF 209 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccchH
Confidence 9989988877664 478899999998775543
No 46
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.08 E-value=0.0003 Score=59.07 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHHHHh-cCCCC----C-----CC--ChHHHHHHHHHHHHH
Q 021536 121 NVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWAV-GLPKR----A-----PI--DSKLLKLLIPVAVCH 182 (311)
Q Consensus 121 si~~~i~nK~vl~~------fp~P~~lt~~r~~i~~llll~~~~~-~~~~~----~-----~i--~~~~~~~ll~lgvl~ 182 (311)
....+++.|+.+++ -.+|+.+..+--..+.+++++.+.. +..+. . +. +.+.+..++..+++.
T Consensus 12 ~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T PF03151_consen 12 SALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA 91 (153)
T ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH
Confidence 33445667777765 2257777777777777766554321 21110 0 11 224455666667777
Q ss_pred HHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 183 ~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
...++..+..++++++-.++++....-+.+.+++.++++|+++..+++|+++.++|+.+.+
T Consensus 92 ~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 92 FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 7888899999999999999999999999999999999999999999999999999998754
No 47
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.99 E-value=0.00066 Score=61.89 Aligned_cols=117 Identities=28% Similarity=0.370 Sum_probs=85.9
Q ss_pred HHHHHHHHhcCCchHHHHH-HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhhcHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~-~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~-l~~~~~n~al~~vsvs~a~ 202 (311)
.+.+|+.. +.+ +..... +++............ .... ...+.+.+..+...+++.. .++.+.+.+++..+++...
T Consensus 170 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 170 TALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred HHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 45677766 333 444444 454422222222222 1111 2345567888888888866 5899999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc
Q 021536 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (311)
Q Consensus 203 iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~ 245 (311)
.+..++|++..++++++++|+++..+++|..+++.|+.+....
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999887643
No 48
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.95 E-value=0.00016 Score=68.10 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH---HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH
Q 021536 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLL---VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH 182 (311)
Q Consensus 106 ~~l~~~~~~~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~---i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~ 182 (311)
+....+....+-|.... +.+|.. + ++ |+..++.|+. ++.++...... +.++ .+.+.....+..|+++
T Consensus 152 ~Gi~~~l~sg~~y~~~~---~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYV---VVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGHI---LAKP-LKKYAILLNILPGLMW 221 (290)
T ss_pred hHHHHHHHHHHHHHHHH---HHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHHh---cccc-hHHHHHHHHHHHHHHH
Confidence 35555555555444433 456754 2 43 7766555543 33333222221 1122 2333444455588888
Q ss_pred HHHHHHHHHHhh-hhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHH----HHHHHHHHhhhhhc
Q 021536 183 ALGHVTSNVSFA-AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (311)
Q Consensus 183 ~l~~~~~n~al~-~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~----lsl~lii~GV~l~~ 243 (311)
.+++.++..+.+ +++++.+.++.+.+|+...+.+++++||+.+++++ +|.++++.|+.+..
T Consensus 222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 888999999999 99999999999999999999999999999999999 99999999998764
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.81 E-value=0.0011 Score=64.24 Aligned_cols=121 Identities=15% Similarity=0.104 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHH-hcCCCC--------CCCCh----HHHHHHHHHHHHHH
Q 021536 123 IFNILNKRIYNYFP------YPYFVSVIHLLVGVVYCLVSWA-VGLPKR--------APIDS----KLLKLLIPVAVCHA 183 (311)
Q Consensus 123 ~~~i~nK~vl~~fp------~P~~lt~~r~~i~~llll~~~~-~~~~~~--------~~i~~----~~~~~ll~lgvl~~ 183 (311)
..+++.|...++.+ .+..+..+...++.+++++... ....+. ..++. ..+..++.-+++|.
T Consensus 208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~ 287 (350)
T PTZ00343 208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY 287 (350)
T ss_pred HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence 34577788776431 2555555667777776665432 111000 00111 11112222333344
Q ss_pred HHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 184 l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+.+.+.+.+++++++..+++...+.|+++.++++++++|+++..+++|.+++++|+.+.+
T Consensus 288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 444455579999999999999999999999999999999999999999999999998764
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.74 E-value=0.00024 Score=59.47 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=61.0
Q ss_pred HHHHH-HHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHH--HhcccCChhHHHHHHHHHHhhhhhccc
Q 021536 176 IPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLT 245 (311)
Q Consensus 176 l~lgv-l~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l--~lkek~s~~~~lsl~lii~GV~l~~~~ 245 (311)
+..|+ ++.++.++.+.++++.+++.+.-+.+..++++.+.++. ++||++++.+++|++++++|+.+...+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 34554 47788899999999999999999999998888888885 899999999999999999999987643
No 51
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=97.70 E-value=3.4e-06 Score=77.71 Aligned_cols=176 Identities=9% Similarity=0.081 Sum_probs=125.8
Q ss_pred HHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHH
Q 021536 126 ILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (311)
Q Consensus 126 i~nK~vl~~-fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ii 204 (311)
+.+.++-+. .+-|...+++-...=.++--.....| + +.-+..|++.+++|+.-.-++.+-.-|+||++....+.+
T Consensus 35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR---~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL 110 (336)
T KOG2766|consen 35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFR---R-KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL 110 (336)
T ss_pred hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhh---h-HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence 345555444 45576655554432222211122211 1 112345777777777765555555678999999888888
Q ss_pred HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc--------ccccHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 021536 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--------LSFNWTGFISAMISNISFTYRSIYSKKAMT 276 (311)
Q Consensus 205 ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e--------~sf~~~G~llallS~l~~Al~~V~~Kkll~ 276 (311)
-.-.-..+.+++|+|+|.|+++.++.+++++++|++++...| .+-...|+.+.++++-+|+..|+....+.+
T Consensus 111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk 190 (336)
T KOG2766|consen 111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK 190 (336)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence 776666688999999999999999999999999998875432 122368999999999999999999888888
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 021536 277 DMDSTNIYAYISIIALFVCIPPAIIVSKRK 306 (311)
Q Consensus 277 ~~~~~~l~~y~~~~s~i~LlP~al~~E~~~ 306 (311)
+.|-.+++....+++.++-..- +++|..+
T Consensus 191 n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~ 219 (336)
T KOG2766|consen 191 NADRVELMGFLGLFGAIISAIQ-FIFERHH 219 (336)
T ss_pred cCcHHHHHHHHHHHHHHHHHHH-Hhhhccc
Confidence 9999999999999888877655 5666543
No 52
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.53 E-value=0.0002 Score=60.15 Aligned_cols=56 Identities=29% Similarity=0.484 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 021536 253 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVSKRKLS 308 (311)
Q Consensus 253 G~llallS~l~~Al~~V~~Kkll~-------~~~~~~l~~y~~~~s~i~LlP~al~~E~~~~~ 308 (311)
|++++++|+++.++|+++.|+.++ +.|+.++++|+++.+.++++|.+++.|+++..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~ 63 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLS 63 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 789999999999999999998773 47999999999999999999999999988743
No 53
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.44 E-value=0.0025 Score=52.78 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 176 l~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+..-+++.++.++...++++++++.+..+ ...--+.+++++.+++||++++.+++++.++++|+++...
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 44455677788888999999999998877 4677889999999999999999999999999999988754
No 54
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.44 E-value=0.0091 Score=55.98 Aligned_cols=134 Identities=18% Similarity=0.193 Sum_probs=101.2
Q ss_pred CCCCh--HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHH-hhhHHHHHHHHHHHhcccCChhHHH----HHHHHHH
Q 021536 165 APIDS--KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWL----SLAPVVI 237 (311)
Q Consensus 165 ~~i~~--~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iik-a~~Pifv~lls~l~lkek~s~~~~l----sl~lii~ 237 (311)
+.++. +.+..-+.-|++.++++..++.|++++.+|.+-=+. ...-+.+.++++++++|--+..+++ +++++++
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liii 115 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIII 115 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHH
Confidence 44543 667777888899999999999999999988765443 4556778999999999976665544 8899999
Q ss_pred hhhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHH
Q 021536 238 GVSMASLTELS--------FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAI 300 (311)
Q Consensus 238 GV~l~~~~e~s--------f~~~G~llallS~l~~Al~~V~~Kkll~~~~~~~l~~y~~~~s~i~LlP~al 300 (311)
|+.+.+..|.+ ....|+...+++.+.|..|.+..|- .++|+++...=+++--++.-+.+.+
T Consensus 116 Gv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~ 184 (269)
T PF06800_consen 116 GVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNL 184 (269)
T ss_pred HHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhh
Confidence 99998775421 1246999999999999999999775 4678888777665544444344433
No 55
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.35 E-value=0.0036 Score=51.04 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcHHHHHHHH-hhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 178 VAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 178 lgvl~~l~~~~~n~al~~vsvs~a~iik-a~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
.-+++.++..+...++++++++.+.-+- ...-+.+++++++++||++++.+++++.++++|+++...
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3345667777788899999999988774 467788899999999999999999999999999998754
No 56
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.32 E-value=0.0069 Score=49.33 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 175 ll~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
.+..-+++..+..+-..+++++|++.+.-+ ...--+.+++.+.+++||++++.+++++.++++|++..
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 333444566777788889999999987665 44667888999999999999999999999999999875
No 57
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.28 E-value=0.0075 Score=55.91 Aligned_cols=115 Identities=23% Similarity=0.275 Sum_probs=82.8
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhhcHHHHH
Q 021536 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 124 ~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~-l~~~~~n~al~~vsvs~a~ 202 (311)
+.+..|.+-+.-+-+ .-+..-+.++.++.+++-... -...-++.+-...-+.++++.+ +-+.+..+++...+...+.
T Consensus 163 YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 163 YIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred HHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 344556665444433 344567788877766553211 1111234445555566666643 5567899999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhh
Q 021536 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 240 (311)
Q Consensus 203 iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~ 240 (311)
++.+++|.+-++.++++++|.++..+|++++.++++++
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988775
No 58
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.23 E-value=0.0065 Score=49.13 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 176 l~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+..-+++..+..+-..+++++|++.+..+ ...--+.+++++++++||++++.+++++.++++|++...
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 33445577777888889999999987765 446678899999999999999999999999999998764
No 59
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0071 Score=48.95 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 176 l~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+..-+++..+..+...++++++++.+-.+ ...--+.+++.+++++||+.+..+++++.++++|++....
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 33445566777788889999999987655 5566788999999999999999999999999999987643
No 60
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.91 E-value=0.035 Score=52.44 Aligned_cols=130 Identities=16% Similarity=0.295 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH-H--hcC-CCCCCC---ChHHHHHHHHHHHHHHHHH
Q 021536 115 FMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSW-A--VGL-PKRAPI---DSKLLKLLIPVAVCHALGH 186 (311)
Q Consensus 115 ~lw~~~si~~~i~nK~vl~~fp-~P~~lt~~r~~i~~llll~~~-~--~~~-~~~~~i---~~~~~~~ll~lgvl~~l~~ 186 (311)
.+...+......++|+++++++ .++...++.-+++.++..+.. . .+. .+..++ .++.+..++..+++...++
T Consensus 160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~ 239 (303)
T PF08449_consen 160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQ 239 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3344555555678888887643 467777776677776654332 2 111 110011 1234556666777767777
Q ss_pred HHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 187 VTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 187 ~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
.+.+.-.++.++-...++..+--+++.+++.+++++++++.+|.|+++++.|..+-..
T Consensus 240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 7777778888888889999999999999999999999999999999999999987654
No 61
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.76 E-value=0.065 Score=51.87 Aligned_cols=120 Identities=17% Similarity=0.226 Sum_probs=74.5
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPK--RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~--~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a 201 (311)
+++.|+..++.+ +......=-+++.++..+. ......+ ..+.+.+.+..++..+++....+.+....+++.++.+.
T Consensus 184 nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~ 262 (334)
T PF06027_consen 184 NVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFF 262 (334)
T ss_pred HHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCcccee
Confidence 346788888765 3322222223343333221 1111111 11233343433333444433334455667888888777
Q ss_pred HHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc
Q 021536 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (311)
Q Consensus 202 ~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~ 245 (311)
++=.-+..++.++++.+++|+++++.-+++.+++++|+++....
T Consensus 263 nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 263 NLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred ehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 77777889999999999999999999999999999999997653
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.72 E-value=0.1 Score=49.26 Aligned_cols=128 Identities=12% Similarity=0.087 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhcCCCC-CC-CChHHHHHHHHHHHHHHHHHHHHHH
Q 021536 115 FMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKR-AP-IDSKLLKLLIPVAVCHALGHVTSNV 191 (311)
Q Consensus 115 ~lw~~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~-~~~~~~~~-~~-i~~~~~~~ll~lgvl~~l~~~~~n~ 191 (311)
.++.+.++.++...|+..+. + +.+=.++.+..-...++.. +....... -. -+...+..+...|+.-++...++..
T Consensus 153 al~la~sf~~Ygl~RK~~~v-~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~ 230 (293)
T COG2962 153 ALALALSFGLYGLLRKKLKV-D-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAA 230 (293)
T ss_pred HHHHHHHHHHHHHHHHhcCC-c-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHH
Confidence 34445555555555655542 2 4444444554444443322 11111110 00 1234566777788888888889999
Q ss_pred HhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 192 al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
|-+.++.+...++.+.+|....+++.++++|.++..++.+.+++-+|+++.+.
T Consensus 231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988754
No 63
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.56 E-value=0.026 Score=44.37 Aligned_cols=55 Identities=16% Similarity=0.303 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHH
Q 021536 181 CHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV 235 (311)
Q Consensus 181 l~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~li 235 (311)
++..+..+...++++++++.+.-+ .....+.+.+++.+++||++++.+++++.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 577788888999999999998655 5688899999999999999999999998764
No 64
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.52 E-value=0.071 Score=50.07 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=58.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHH----HHHHHHHHhhh
Q 021536 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVS 240 (311)
Q Consensus 168 ~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~----lsl~lii~GV~ 240 (311)
+++.|+ -+..|+++..++.+...|.+.+.++.+-.+.++..+...+.+.+++||+-+++++ ++++++++|.+
T Consensus 192 ~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 192 EKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred ccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 344555 4568999999999999999999999999999999999999999999999887755 34444555543
No 65
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.44 E-value=0.024 Score=50.89 Aligned_cols=83 Identities=20% Similarity=0.221 Sum_probs=66.6
Q ss_pred hcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc--------------------cc-------c
Q 021536 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--------------------EL-------S 248 (311)
Q Consensus 196 vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~--------------------e~-------s 248 (311)
++++.....++..++++++.++.+.+++++..++++.++...|+...... +. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 56778888999999999999999999999999999999999998753211 10 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 021536 249 FNWTGFISAMISNISFTYRSIYSKKAMTDM 278 (311)
Q Consensus 249 f~~~G~llallS~l~~Al~~V~~Kkll~~~ 278 (311)
..+.|....+.+.++.++..++.++..++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 236788888888888889999988876643
No 66
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.09 E-value=0.37 Score=40.71 Aligned_cols=116 Identities=17% Similarity=0.182 Sum_probs=78.9
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~-~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~i 203 (311)
..+|-.+-++..+|+.-+++-+.++.+.+.+.+.. +.++.....+-.|.. ..-|++......+.++...++.++.+..
T Consensus 17 ~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 17 AAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSNIILVPRLGAALTTI 95 (138)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 34555555555569999999999998877654432 211212222222332 2356666677778888999999888776
Q ss_pred HH-hhhHHHHHHHHHH----HhcccCChhHHHHHHHHHHhhhh
Q 021536 204 IK-ALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 204 ik-a~~Pifv~lls~l----~lkek~s~~~~lsl~lii~GV~l 241 (311)
+. ...-+...+++.+ .-|+++++.+.++++++++|+.+
T Consensus 96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 53 4456777778886 35788999999999999999864
No 67
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.86 E-value=0.029 Score=53.42 Aligned_cols=68 Identities=22% Similarity=0.340 Sum_probs=60.4
Q ss_pred HHHHHH-HHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 176 IPVAVC-HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 176 l~lgvl-~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
...|+. +.++...+..|+.+.|.+..+-+.+..-++.++++.+++|||+++..+.|..++++|+.++.
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 344544 56778899999999999999999999999999999999999999999999999999997753
No 68
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.71 E-value=0.032 Score=45.74 Aligned_cols=70 Identities=21% Similarity=0.372 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 172 ~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
|+..+|..+ +-.+.+.+++.+.+.+.|.+.-+ +++.=+|+++.++++.+|..++..++|+++++.|+.+.
T Consensus 42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 566666664 44556677889999999988877 58889999999998888889999999999999998763
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.28 E-value=0.026 Score=52.93 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=65.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 168 ~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
..++|..+.-+|++..+++++-.+++|.=-++-..+.+.+.-+|..+...+++|+-++++.|.|+++++...+.+
T Consensus 249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 456777788899998899999999999988888889999999999999999999999999999988877665554
No 70
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.14 E-value=0.78 Score=44.68 Aligned_cols=103 Identities=19% Similarity=0.213 Sum_probs=81.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhcccC-------ChhHHHHHHHHHHh
Q 021536 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQL-------PLTLWLSLAPVVIG 238 (311)
Q Consensus 167 i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lkek~-------s~~~~lsl~lii~G 238 (311)
.+.+.+..-+.-|++...++..+..+++++.+|.+.-+ ..+.-++..++..++++|-. .....++++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 34566777777888899999999999999999988755 45677888888898988643 24467889999999
Q ss_pred hhhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 021536 239 VSMASL----TEL--------SFN-WTGFISAMISNISFTYRSI 269 (311)
Q Consensus 239 V~l~~~----~e~--------sf~-~~G~llallS~l~~Al~~V 269 (311)
+++.+. .|. ++| ..|++.+++|.+.++.|+.
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 999876 332 133 5899999999999999993
No 71
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.08 E-value=0.35 Score=43.38 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhh
Q 021536 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 177 ~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l 241 (311)
.+.++.+.+..+..+.+++.+.....+...+.++++.+++.++++|+++..+++|..+++.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 33445666667788899999999999999999999999999999999999999999999988754
No 72
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=94.16 E-value=1.9 Score=39.33 Aligned_cols=50 Identities=8% Similarity=0.149 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHH
Q 021536 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI 219 (311)
Q Consensus 170 ~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~ 219 (311)
++|..++..|++-.+++.+.+.++++++++....+.+++|++.++++.+.
T Consensus 206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 47888888888766889999999999999999999999999999998764
No 73
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.26 E-value=0.32 Score=46.74 Aligned_cols=127 Identities=13% Similarity=0.111 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHHH-HHHHhcCCCCC------CCChHHHHHHHHHHHHHHH
Q 021536 116 MWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLIPVAVCHAL 184 (311)
Q Consensus 116 lw~~~si~~~i~nK~vl~~----fp~P~~lt~~r~~i~~llll-~~~~~~~~~~~------~i~~~~~~~ll~lgvl~~l 184 (311)
.+......=+++.|.++.+ .+ ++.+..++--++.+.++ +.+.....+.. ..+... ..++..++++..
T Consensus 170 ~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~sv~~f~ 247 (316)
T KOG1441|consen 170 ISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLLNSVLAFL 247 (316)
T ss_pred HHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHHHHHHHHH
Confidence 3444444557888888842 44 77776666666666666 55432211111 122222 234444567667
Q ss_pred HHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 185 ~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
.+...++.+.++++=.+++....-=+++...++++++++.++...+|.++.++|+.+...
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 778888899999998888888777778888999999999999999999999999998754
No 74
>PRK13499 rhamnose-proton symporter; Provisional
Probab=92.11 E-value=8.4 Score=37.56 Aligned_cols=72 Identities=10% Similarity=0.110 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcHHHHHH---HH-hhhHHHHHHHHHHHhcccCC------hhHHHHHHHHHHhhhhhc
Q 021536 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHT---IK-ALEPFFNAAASQFILGQQLP------LTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 174 ~ll~lgvl~~l~~~~~n~al~~vsvs~a~i---ik-a~~Pifv~lls~l~lkek~s------~~~~lsl~lii~GV~l~~ 243 (311)
.....|+....++.++.++-+..++....+ +. ++.-++..+-+. ++||+=+ ...+++++++++|.++..
T Consensus 262 ~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 262 LSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 346677778888888888888775554444 55 555465555565 6988766 667888888888888876
Q ss_pred ccc
Q 021536 244 LTE 246 (311)
Q Consensus 244 ~~e 246 (311)
.++
T Consensus 341 ~~~ 343 (345)
T PRK13499 341 LGN 343 (345)
T ss_pred hcc
Confidence 543
No 75
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.62 E-value=8.1 Score=33.24 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=72.6
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHH
Q 021536 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (311)
Q Consensus 125 ~i~nK~vl~~fp~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~--~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ 202 (311)
+-+|-.+-+....|..-+++-+.+|.+++......+ .+.+... ++.-.+...-|++.+.....+......+.+..+.
T Consensus 21 ~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~ 99 (150)
T COG3238 21 AAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTI 99 (150)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHH
Confidence 445666656666799999999999988776443322 2222222 2211223334455444455555566677666555
Q ss_pred HH-HhhhHHHHHHHHHHHh----cccCChhHHHHHHHHHHhhhhhc
Q 021536 203 TI-KALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 203 ii-ka~~Pifv~lls~l~l----kek~s~~~~lsl~lii~GV~l~~ 243 (311)
++ .+..-+...+++.+=+ ++++++.++++++++++|+.++.
T Consensus 100 ~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 100 ALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 43 4555666666666544 47899999999999999965553
No 76
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.95 E-value=5 Score=38.46 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhh
Q 021536 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 168 ~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l 241 (311)
.++.++-++..+.+.+.++.+-+.-++.-.+=..++|.-+-=+++.+++.+.++.+.++.+|.++.+.+.|+.+
T Consensus 237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 45778889999999998888777777766555566677777899999999999999999999999988888765
No 77
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.63 E-value=0.2 Score=48.07 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=59.9
Q ss_pred HHHHH-HHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 177 PVAVC-HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 177 ~lgvl-~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
..|++ +..+-..++.|+.+.|.+..+-+.++.-++.++++.+++|||.++...++.+++++|-.++.
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 35655 56788899999999999999999999999999999999999999999999999999987654
No 78
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=86.11 E-value=0.89 Score=35.67 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 021536 262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVSKR 305 (311)
Q Consensus 262 l~~Al~~V~~Kkll~~~~~~~l~~y~~~~s~i~LlP~al~~E~~ 305 (311)
++|+.+.++.|+..+++|+....+|....+.+ +++...+.+..
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 43 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRK 43 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccc
Confidence 46889999999999999999999999999998 77777666653
No 79
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=84.63 E-value=1.7 Score=40.32 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhh
Q 021536 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 170 ~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l 241 (311)
..|..+..++++.++++++-+.-..+-++-.-+++..+--+|+++.+.++++..++.++|++..+.+.|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 346678888998889998888777776665566667777899999999999999999999999999888754
No 80
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=83.20 E-value=18 Score=29.37 Aligned_cols=61 Identities=15% Similarity=0.192 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhhhcHHHHHHHHh-hhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 182 HALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 182 ~~l~~~~~n~al~~vsvs~a~iika-~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
|.+..-.+-.+.+.-+.+.--++.= .+-..-++++.+++||++++....+.+++++++.++
T Consensus 45 Y~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 45 YCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444445555666555544433322 122233577889999999999999999998887653
No 81
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=80.17 E-value=1.4 Score=41.16 Aligned_cols=74 Identities=14% Similarity=0.206 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHH----HHHHHHHhhhh
Q 021536 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVSM 241 (311)
Q Consensus 167 i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~l----sl~lii~GV~l 241 (311)
.++..|+ -+..|+..+.++.+...|-+.+.++..-.+.++--+...+-+.+++|||-+.+++. +++++++|.++
T Consensus 205 ~~K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 205 FNKYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred hHHHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 3444444 45578899999999999999888877777788888888899999999999988764 44444444433
No 82
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=77.16 E-value=0.52 Score=43.82 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=81.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHH-hhhHHHHHHHHHHHhcccCChhHH----HHHHHHHHhh
Q 021536 165 APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGV 239 (311)
Q Consensus 165 ~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iik-a~~Pifv~lls~l~lkek~s~~~~----lsl~lii~GV 239 (311)
|..+.+.+..-+.-|.+.+.++..++-|++++++|.+-=+. .+.-+-+.+++.+.++|-.+..+. ++++++++|+
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 45566666666667777889999999999999988765443 345666778899999998776654 5788899999
Q ss_pred hhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHhhh
Q 021536 240 SMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKA 274 (311)
Q Consensus 240 ~l~~~~e~--------sf~~~G~llallS~l~~Al~~V~~Kkl 274 (311)
.+.++.|. +.--.|+...+.|.+.|..|.+..+..
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f 174 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF 174 (288)
T ss_pred eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc
Confidence 99877542 111368888888888888888876654
No 83
>COG2510 Predicted membrane protein [Function unknown]
Probab=75.99 E-value=12 Score=31.60 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 021536 254 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIV 302 (311)
Q Consensus 254 ~llallS~l~~Al~~V~~Kkll~~~~~~~l~~y~~~~s~i~LlP~al~~ 302 (311)
.+++++|++.+++..++.|.-++++||..-+..-++...+++..+.+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~ 53 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVT 53 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999888888888887776665443
No 84
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=74.59 E-value=89 Score=30.54 Aligned_cols=104 Identities=20% Similarity=0.257 Sum_probs=73.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHH-HhhhHHHHHHHHHHHhc-------ccCChhHHHHHHHHHHhh
Q 021536 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILG-------QQLPLTLWLSLAPVVIGV 239 (311)
Q Consensus 168 ~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~ii-ka~~Pifv~lls~l~lk-------ek~s~~~~lsl~lii~GV 239 (311)
+.+.+......|++..++.+.+-.+++|+.+|..+-| ..+.-++-.++-.++.+ ++-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 4456677788899888888888899999888876644 33444444455444433 233457889999999999
Q ss_pred hhhcc----cc-------cccc-HHHHHHHHHHHHHHHHHHHHH
Q 021536 240 SMASL----TE-------LSFN-WTGFISAMISNISFTYRSIYS 271 (311)
Q Consensus 240 ~l~~~----~e-------~sf~-~~G~llallS~l~~Al~~V~~ 271 (311)
++... .| .+|| -.|.+.+++|.+..+..++-.
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 88753 11 1244 379999999999888888754
No 85
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=74.53 E-value=56 Score=30.35 Aligned_cols=121 Identities=10% Similarity=0.050 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHH-HHhcCCCC----CCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 021536 120 LNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKR----APIDSKLLKLLIPVAVCHALGHVTSNVS 192 (311)
Q Consensus 120 ~si~~~i~nK~vl~--~fp~P~~lt~~r~~i~~llll~~-~~~~~~~~----~~i~~~~~~~ll~lgvl~~l~~~~~n~a 192 (311)
.+..+.+..|...+ .|. -....++.-+.+..+++.+ ....-... ..++.+.+..++.-|++..+...++-|.
T Consensus 166 ssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWc 244 (309)
T COG5070 166 SSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWC 244 (309)
T ss_pred hHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence 33344455565544 343 2334456666666655433 22211111 1344455667777788877777888889
Q ss_pred hhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhh
Q 021536 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (311)
Q Consensus 193 l~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l 241 (311)
+.-++...+.++.++.-.-.++.+.+++++..+...+.++++.....++
T Consensus 245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999888889999999999998888877665544433
No 86
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.79 E-value=45 Score=26.81 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=27.6
Q ss_pred HHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 213 AAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 213 ~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+.++.+++||.+++..+.+.+++..|+.++.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999987754
No 87
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.65 E-value=35 Score=32.90 Aligned_cols=133 Identities=12% Similarity=0.025 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH-HhcCCC-----CCCC-ChHHHHHHHHHHHHHH
Q 021536 112 FFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPI-DSKLLKLLIPVAVCHA 183 (311)
Q Consensus 112 ~~~~lw~~~si~~~i~nK~vl~~fp-~P~~lt~~r~~i~~llll~~~-~~~~~~-----~~~i-~~~~~~~ll~lgvl~~ 183 (311)
.+..........+..+.|+..+.-. .-+.+.++.-+.....+.+.+ ..+..+ .++. +...+..+..-+++..
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf 239 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGF 239 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHH
Confidence 3334444555566677888877421 123344555555544433332 222111 1111 1233444554455555
Q ss_pred HHHHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 184 l~~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
+-.+++.+..+..|+-.+++.....-..+.+...++.++.+++....|+.+.+.|-++..+
T Consensus 240 ~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 240 GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 5567888888888888887777666666677777777888898888888888888777654
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=64.60 E-value=24 Score=34.93 Aligned_cols=62 Identities=10% Similarity=0.067 Sum_probs=46.4
Q ss_pred HHHHHHHhhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccccc
Q 021536 186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL 247 (311)
Q Consensus 186 ~~~~n~al~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e~ 247 (311)
-++..+|.-.++.-.+++-.+.+.-..++...++.++++++..++|.+++++|-+++.+.+.
T Consensus 332 DylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 332 DYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 34556666666665555555555444688899999999999999999999999998876543
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=62.91 E-value=1.3e+02 Score=27.73 Aligned_cols=113 Identities=12% Similarity=0.136 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH-HHHHhcCCCCCCCCh----HHHH-HHHHHHHHHHHHHHHHHHH
Q 021536 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRAPIDS----KLLK-LLIPVAVCHALGHVTSNVS 192 (311)
Q Consensus 119 ~~si~~~i~nK~vl~~fp~P~~lt~~r~~i~~llll-~~~~~~~~~~~~i~~----~~~~-~ll~lgvl~~l~~~~~n~a 192 (311)
.++-.-.+++.+++++-+.|+.+--.|+.+..+++. +....+ +..++.+ +-+- ....+-+.++.+-+....-
T Consensus 124 ~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~--~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v 201 (244)
T PF04142_consen 124 FLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS--DGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFV 201 (244)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc--cccccccCCchhhcchHHHHHHHHHHHhhHHHHHH
Confidence 445555788999998765577776777765555443 322111 1111111 1111 1222223455555666667
Q ss_pred hhhhcHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHH
Q 021536 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (311)
Q Consensus 193 l~~vsvs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~ 233 (311)
++|.+.=.=....+..-+.+.+++.++++.+++....+|..
T Consensus 202 ~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 202 LKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 88887656666677888999999999999999998887653
No 90
>COG5373 Predicted membrane protein [Function unknown]
Probab=55.33 E-value=2.5e+02 Score=30.79 Aligned_cols=25 Identities=4% Similarity=0.073 Sum_probs=14.3
Q ss_pred hhhhcHHHHHHHHhhhHHHHHHHHH
Q 021536 193 FAAVAVSFTHTIKALEPFFNAAASQ 217 (311)
Q Consensus 193 l~~vsvs~a~iika~~Pifv~lls~ 217 (311)
+.+++.+.+-++..+.-+.++.++.
T Consensus 221 yd~i~pgaAf~LL~lIs~~t~~LAl 245 (931)
T COG5373 221 YDLIGPGAAFALLVLISLATIGLAL 245 (931)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHH
Confidence 3456666666666655555555543
No 91
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=47.00 E-value=2.3e+02 Score=25.95 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHhhhHHH---HHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFF---NAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 170 ~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iika~~Pif---v~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
..+...+|+=+|++.-..........++.+...+=..+.-+| +.+.+.++.+.+.+....++-++++.|....
T Consensus 100 t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~GlyfL 175 (224)
T PF09930_consen 100 TFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGLYFL 175 (224)
T ss_pred chhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 456677788777765444333344444554444433332222 2233444455666777788888888887543
No 92
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=46.51 E-value=32 Score=28.06 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcHHHHH-HHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhh
Q 021536 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 172 ~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~-iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~ 242 (311)
|...+|..+= -.+..++++-+++.+.+.+. +-++++-.|+.+.+..+..|......+++..+++.|+.+.
T Consensus 53 w~Y~iPFllN-qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLN-QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHH-HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 4444555432 23445666677777766654 3356777889999987777778888899999999998764
No 93
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.72 E-value=24 Score=33.66 Aligned_cols=134 Identities=14% Similarity=0.108 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHH-hc----CCCCCCC-ChHHHHHHHHHHH
Q 021536 109 VTGFFFFMWYFLNVIFN-ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWA-VG----LPKRAPI-DSKLLKLLIPVAV 180 (311)
Q Consensus 109 ~~~~~~~lw~~~si~~~-i~nK~vl~~fp-~P~~lt~~r~~i~~llll~~~~-~~----~~~~~~i-~~~~~~~ll~lgv 180 (311)
.+|..+.+|-.+...++ ++.|..+.... .-|.++++--+.+.++.++... .| ....+.. +.+.|..+.+-|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 35666677766655553 66776655422 2366777777777766554432 22 1111222 3455666666666
Q ss_pred HHHHHHHHHHHHhhhhcHHHHHHHHhhh-HHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 181 CHALGHVTSNVSFAAVAVSFTHTIKALE-PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 181 l~~l~~~~~n~al~~vsvs~a~iika~~-Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+.....+.+.+-+ +...+.+|.|..+. -..-.+++..+++|.-+...|-|-+++..|..+..
T Consensus 264 fgF~mgyvTg~QI-K~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 264 FGFAMGYVTGWQI-KVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHhhheeeEEE-EecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 6322222222222 33445555554433 45566888889999988888888777777765543
No 94
>PRK02237 hypothetical protein; Provisional
Probab=36.06 E-value=62 Score=26.37 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 209 Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
-+...+-.+.+-|++++.+.+++..++++|+.++..
T Consensus 70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 334445677778999999999999999999987644
No 95
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=35.27 E-value=3.4e+02 Score=26.11 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=39.9
Q ss_pred cHHHHHHHHhhhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcccc
Q 021536 197 AVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (311)
Q Consensus 197 svs~a~iika~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~e 246 (311)
.+..+.++...-=-.+.+++++++.+.++....-+.++++.|+.+-.+.+
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 44555555555566788999999999999999999999999999866654
No 96
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.46 E-value=59 Score=26.40 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhcc
Q 021536 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (311)
Q Consensus 209 Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~ 244 (311)
-+...+-.+.+-|++++...+++..++++|+.++..
T Consensus 68 I~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 68 IVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 344555677778999999999999999999988754
No 97
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=31.32 E-value=1.8e+02 Score=24.35 Aligned_cols=52 Identities=4% Similarity=0.070 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhcCc
Q 021536 254 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVSKR 305 (311)
Q Consensus 254 ~llallS~l~~Al~~V~~Kkll~~~~-~~~l~~y~~~~s~i~LlP~al~~E~~ 305 (311)
+++++++...-+++..+.-++-++.+ |+.-.+.+...+++.+..+.++.+.+
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~ 55 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP 55 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45666677777777777666666554 77777777777777777766666543
No 98
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=28.00 E-value=2.3e+02 Score=27.25 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhc
Q 021536 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (311)
Q Consensus 207 ~~Pifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~ 243 (311)
+-=++..++|.+.++..++++.|+|.++.+.|..+.+
T Consensus 277 lRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 277 LRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999999999999999999998865
No 99
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=27.25 E-value=1.6e+02 Score=24.67 Aligned_cols=39 Identities=21% Similarity=0.447 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHH
Q 021536 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVI 144 (311)
Q Consensus 106 ~~l~~~~~~~lw~~~si~~~i~nK~vl~~fp-~P~~lt~~ 144 (311)
..+.+.++.+++.+.++.=.++-|.+...++ ||++++-+
T Consensus 54 e~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~Ql 93 (130)
T PF08627_consen 54 ENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQL 93 (130)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHh
Confidence 3556666666766666655566677777665 78887755
No 100
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=25.99 E-value=4.6e+02 Score=23.14 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=23.4
Q ss_pred HhhhHHHHHHHHHHHhcccCC-------------hhHHHHHHHHHHhhhhh
Q 021536 205 KALEPFFNAAASQFILGQQLP-------------LTLWLSLAPVVIGVSMA 242 (311)
Q Consensus 205 ka~~Pifv~lls~l~lkek~s-------------~~~~lsl~lii~GV~l~ 242 (311)
....|+.+.++.+.+.+||.. .+.....++.++|+.++
T Consensus 159 i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~ 209 (214)
T PF11139_consen 159 IASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLL 209 (214)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 456777778888888776652 23444555555555554
No 101
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=22.73 E-value=6.3e+02 Score=23.52 Aligned_cols=148 Identities=14% Similarity=0.245 Sum_probs=64.8
Q ss_pred HHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHH
Q 021536 127 LNKRIYNYF-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (311)
Q Consensus 127 ~nK~vl~~f-p~P~~lt~~r~~i~~llll~~~~~~~~~~~~i~~~~~~~ll~lgvl~~l~~~~~n~al~~vsvs~a~iik 205 (311)
+.|++-+.+ +.|..+. +-+.++.++++..-..+.++.++.++-.++..+.+|+++++..+= +.+ +
T Consensus 99 ~~~~i~~~~~~~~~~v~-~~Li~~g~lL~~~~~~~~~~~~~~~~~~~~dal~iGl~Q~lAl~P---GiS----------R 164 (259)
T PF02673_consen 99 FKDFIEALFFSSPLVVA-IALIITGLLLWLADRLKRKGRKDEEDITFKDALIIGLAQGLALIP---GIS----------R 164 (259)
T ss_pred HHHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHHccCCCCCcccCCHHHHHHHHHHHHcccCC---CcC----------h
Confidence 344444445 3466554 444444444444332222111222233477788899887654221 111 1
Q ss_pred hhhHHHHHHHHHHHh---cccCChhHHHHHHHHHHhhhhhcccc------ccccHHHHHHHHHHHHHHHHHHH-HHhhhc
Q 021536 206 ALEPFFNAAASQFIL---GQQLPLTLWLSLAPVVIGVSMASLTE------LSFNWTGFISAMISNISFTYRSI-YSKKAM 275 (311)
Q Consensus 206 a~~Pifv~lls~l~l---kek~s~~~~lsl~lii~GV~l~~~~e------~sf~~~G~llallS~l~~Al~~V-~~Kkll 275 (311)
+-.-+ .+-++. +|+-.....+-.++++.|..+....| ...++.-...+++.++..++-.+ +..+..
T Consensus 165 SG~Ti----~~~l~~G~~r~~A~~fSFllsiP~ilga~~l~~~~~~~~~~~~~~~~~~~ig~~~afv~g~l~i~~ll~~~ 240 (259)
T PF02673_consen 165 SGATI----TAGLLLGLDREEAARFSFLLSIPAILGAGLLELKDLFSAGLDSGSWPPLLIGFVVAFVVGYLAIKWLLRFL 240 (259)
T ss_pred HHHHH----HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111 112222 23333333333446777776654322 11234444455555555554443 223334
Q ss_pred cCCCHHHHHHHHHHHHH
Q 021536 276 TDMDSTNIYAYISIIAL 292 (311)
Q Consensus 276 ~~~~~~~l~~y~~~~s~ 292 (311)
++.+-....+|...++.
T Consensus 241 ~~~~~~~F~~Y~~~lg~ 257 (259)
T PF02673_consen 241 KRRKLRPFAIYRIILGI 257 (259)
T ss_pred hhCCceeehhHHhhHHH
Confidence 44444445555655554
No 102
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=20.12 E-value=1.2e+02 Score=24.67 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcccCChhHHHHHHHHHHhhhhhccc
Q 021536 210 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (311)
Q Consensus 210 ifv~lls~l~lkek~s~~~~lsl~lii~GV~l~~~~ 245 (311)
+...+-.+++-|.+++++.+++.++.++|+.++..+
T Consensus 70 ~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 70 AASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 334455666779999999999999999998776543
Done!