Query 021538
Match_columns 311
No_of_seqs 194 out of 985
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 05:34:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pila_ d.24.1.1 (A:) Pilin Gc 17.4 87 0.0063 22.0 5.0 28 72-99 6-33 (158)
2 d2i9wa1 d.17.4.30 (A:46-158) H 10.7 67 0.0049 23.6 2.5 33 233-265 68-109 (113)
3 d2vvpa1 c.121.1.1 (A:3-158) Al 10.4 84 0.0061 24.4 3.1 25 89-113 132-156 (156)
4 d2gexa1 d.17.4.9 (A:2-139) Nog 6.3 82 0.0059 22.3 1.2 20 258-277 116-135 (138)
5 d1gvea_ c.1.7.1 (A:) Aflatoxin 6.0 58 0.0042 27.2 0.1 29 83-111 5-33 (324)
6 d2geya1 d.17.4.9 (A:2-145) Put 5.7 1E+02 0.0075 22.1 1.4 20 258-277 114-133 (144)
7 d2ciwa2 a.39.3.1 (A:120-298) C 5.5 61 0.0045 24.9 -0.0 10 218-227 87-96 (179)
8 d2j7ja2 g.37.1.1 (A:29-57) Tra 4.8 77 0.0056 18.0 0.1 10 300-309 13-22 (29)
9 d1frba_ c.1.7.1 (A:) FR-1 (fib 4.3 1.4E+02 0.0098 24.3 1.4 23 83-109 15-37 (315)
10 d1sjwa_ d.17.4.9 (A:) Nogaloni 4.1 2.5E+02 0.018 19.3 2.7 19 258-276 116-134 (142)
No 1
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=17.40 E-value=87 Score=22.03 Aligned_cols=28 Identities=4% Similarity=-0.103 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHH
Q 021538 72 KWLLFLPGAISFGLGTWQIFRRQDKIKM 99 (311)
Q Consensus 72 ~lll~v~~~v~v~LG~WQl~R~~wK~~L 99 (311)
++++++++++|.+++.-.+.+..+|.+.
T Consensus 6 LlVViaIIgILaaia~P~~~~~~~~a~~ 33 (158)
T d2pila_ 6 LMIVIAIVGILAAVALPAYQDYTARAQV 33 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556677777888877777666443
No 2
>d2i9wa1 d.17.4.30 (A:46-158) Hypothetical protein Psyc2064 {Psychrobacter arcticus [TaxId: 334543]}
Probab=10.66 E-value=67 Score=23.61 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=22.1
Q ss_pred cceEEEEEEEeccccc----cCCccccC----C-CCeeEeeC
Q 021538 233 ELLVLFVGVRSQAFLY----QQMIQAPV----N-GSMWMFLQ 265 (311)
Q Consensus 233 ~g~vtVtGvlr~~E~~----~~~~f~p~----n-~~~w~~iD 265 (311)
+|.|++....+..... ..+.|... + +|+|+|+|
T Consensus 68 ~g~VeF~A~y~~~~~~~~~hE~S~F~r~~~~~~edG~W~Y~D 109 (113)
T d2i9wa1 68 HAQVEFKAYFKTPDGLQAHHELSTFVKIKNKANSDASWYFLD 109 (113)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEECSSSSCEEEEECC
T ss_pred EEEEEEEEEEEeCCCceeEEEeeEEEeccCCCCcCCeEEEEC
Confidence 5889999988753311 24557642 2 68999998
No 3
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=10.45 E-value=84 Score=24.41 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=21.8
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCcc
Q 021538 89 QIFRRQDKIKMLEYRQNRLQMDPLR 113 (311)
Q Consensus 89 Ql~R~~wK~~Li~~i~~r~~a~Pv~ 113 (311)
.=.|.+.+.+.|++++++.+.||+|
T Consensus 132 ~ggRh~~Rv~ki~~~e~~~~~~~~p 156 (156)
T d2vvpa1 132 KAQRHQRRIDILAEYERTHEAPPVP 156 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCChHHHHHHHHHHHHHcCCCCCCC
Confidence 3569999999999999999988876
No 4
>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}
Probab=6.29 E-value=82 Score=22.31 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=17.8
Q ss_pred CCeeEeeCHHHHHHhhCCCc
Q 021538 258 GSMWMFLQLLVLVGSLKTLS 277 (311)
Q Consensus 258 ~~~w~~iDl~~ma~~lg~~p 277 (311)
...|.++|...|.++||..|
T Consensus 116 ~e~~~~~D~~~~~~QlG~~P 135 (138)
T d2gexa1 116 VEHWDVFNFSPLFRDLGVVP 135 (138)
T ss_dssp EEEEEEEECHHHHHHSTTCH
T ss_pred EEEEEEECHHHHHHHcCCCC
Confidence 46899999999999999876
No 5
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.96 E-value=58 Score=27.23 Aligned_cols=29 Identities=24% Similarity=0.113 Sum_probs=22.2
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcCCC
Q 021538 83 FGLGTWQIFRRQDKIKMLEYRQNRLQMDP 111 (311)
Q Consensus 83 v~LG~WQl~R~~wK~~Li~~i~~r~~a~P 111 (311)
++||.||+.+...+.+-++-++.++.+.-
T Consensus 5 ~~LGt~~~G~~~d~~~a~~~l~~a~~~Gi 33 (324)
T d1gvea_ 5 TVLGAMEMGRRMDVTSSSRSVRAFLQRGH 33 (324)
T ss_dssp EEEECTTBTTTBCHHHHHHHHHHHHHTTC
T ss_pred EEECCccCCCCCCHHHHHHHHHHHHHCCC
Confidence 47999999977667777777777776554
No 6
>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}
Probab=5.68 E-value=1e+02 Score=22.07 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=17.5
Q ss_pred CCeeEeeCHHHHHHhhCCCc
Q 021538 258 GSMWMFLQLLVLVGSLKTLS 277 (311)
Q Consensus 258 ~~~w~~iDl~~ma~~lg~~p 277 (311)
...|-++|...|.+++|..|
T Consensus 114 ~e~~~~~D~~~~~~QLG~~p 133 (144)
T d2geya1 114 VEHWDVINMRPLLVRLGKLP 133 (144)
T ss_dssp EEEEEEEECHHHHHHTTSSC
T ss_pred EEEEEeeCHHHHHHHCCCCC
Confidence 46899999999999999754
No 7
>d2ciwa2 a.39.3.1 (A:120-298) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}
Probab=5.50 E-value=61 Score=24.85 Aligned_cols=10 Identities=30% Similarity=1.548 Sum_probs=7.9
Q ss_pred ccchhhhhcc
Q 021538 218 QSSWWWFWLK 227 (311)
Q Consensus 218 ~~~ww~~~~~ 227 (311)
+.+||+||..
T Consensus 87 ridwwkywft 96 (179)
T d2ciwa2 87 RIDWWKYWFT 96 (179)
T ss_dssp EHHHHHHHHH
T ss_pred Eeehhhhhhc
Confidence 3579999984
No 8
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=4.79 E-value=77 Score=17.97 Aligned_cols=10 Identities=40% Similarity=0.398 Sum_probs=7.6
Q ss_pred eeeeecchhc
Q 021538 300 LCFGVQSCLK 309 (311)
Q Consensus 300 ~~~~~~~~~~ 309 (311)
-||+.-||||
T Consensus 13 k~fs~ps~lk 22 (29)
T d2j7ja2 13 KRFSLPSRLK 22 (29)
T ss_dssp CEESSHHHHH
T ss_pred ccccCHHHHh
Confidence 3788888887
No 9
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.29 E-value=1.4e+02 Score=24.33 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=14.4
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcC
Q 021538 83 FGLGTWQIFRRQDKIKMLEYRQNRLQM 109 (311)
Q Consensus 83 v~LG~WQl~R~~wK~~Li~~i~~r~~a 109 (311)
++||+|+++..+- .+.++.++++
T Consensus 15 iGlGtw~~~~~~a----~~~i~~Ald~ 37 (315)
T d1frba_ 15 VGLGTWKSPPNQV----KEAVKAAIDA 37 (315)
T ss_dssp BCEECTTCCHHHH----HHHHHHHHHT
T ss_pred cceECCCCCHHHH----HHHHHHHHHc
Confidence 4799999986433 3445555544
No 10
>d1sjwa_ d.17.4.9 (A:) Nogalonic acid methyl ester cyclase SnoaL {Streptomyces nogalater [TaxId: 38314]}
Probab=4.12 E-value=2.5e+02 Score=19.33 Aligned_cols=19 Identities=5% Similarity=-0.116 Sum_probs=16.9
Q ss_pred CCeeEeeCHHHHHHhhCCC
Q 021538 258 GSMWMFLQLLVLVGSLKTL 276 (311)
Q Consensus 258 ~~~w~~iDl~~ma~~lg~~ 276 (311)
...|.+.|...|.++||..
T Consensus 116 ~e~~~~~D~~~~~~QlG~~ 134 (142)
T d1sjwa_ 116 RDHRDWPDFQGTLRQLGDP 134 (142)
T ss_dssp EEEEEEECHHHHHHHTTSC
T ss_pred EEEEEeccHHHHHHHCCCC
Confidence 4689999999999999974
Done!