Query 021539
Match_columns 311
No_of_seqs 177 out of 1467
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 03:47:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1104 NifS Cysteine sulfinat 100.0 3.9E-40 8.4E-45 320.0 17.4 182 109-302 25-219 (386)
2 COG0520 csdA Selenocysteine ly 100.0 7.9E-40 1.7E-44 322.4 19.2 180 121-309 61-248 (405)
3 KOG1549 Cysteine desulfurase N 100.0 6.2E-37 1.4E-41 299.3 17.7 177 113-301 71-258 (428)
4 PLN02724 Molybdenum cofactor s 100.0 3.8E-35 8.2E-40 310.5 19.9 239 41-309 21-286 (805)
5 PF00266 Aminotran_5: Aminotra 100.0 1.1E-30 2.3E-35 251.2 15.0 178 121-308 38-223 (371)
6 PRK09295 bifunctional cysteine 100.0 2.6E-29 5.5E-34 245.0 19.5 174 121-305 62-245 (406)
7 PRK10874 cysteine sulfinate de 100.0 2.8E-28 6E-33 236.8 20.1 223 45-306 9-242 (401)
8 PLN02651 cysteine desulfurase 100.0 3.4E-28 7.5E-33 233.9 19.4 177 121-309 38-223 (364)
9 TIGR03392 FeS_syn_CsdA cystein 100.0 1.1E-27 2.5E-32 232.3 19.4 175 121-306 55-239 (398)
10 PLN02855 Bifunctional selenocy 99.9 7.4E-27 1.6E-31 229.1 20.3 177 122-308 72-257 (424)
11 TIGR01979 sufS cysteine desulf 99.9 2.3E-26 4.9E-31 223.0 19.6 173 122-305 58-240 (403)
12 TIGR03402 FeS_nifS cysteine de 99.9 3.3E-26 7.1E-31 220.5 19.6 169 122-302 38-214 (379)
13 TIGR03403 nifS_epsilon cystein 99.9 4.7E-26 1E-30 219.9 19.5 171 121-302 37-218 (382)
14 TIGR02326 transamin_PhnW 2-ami 99.9 7.1E-26 1.5E-30 217.0 18.9 190 108-304 17-210 (363)
15 TIGR02006 IscS cysteine desulf 99.9 1.5E-25 3.3E-30 218.6 19.4 175 122-308 43-226 (402)
16 TIGR01814 kynureninase kynuren 99.9 1.6E-25 3.4E-30 218.8 17.1 169 130-308 74-255 (406)
17 PRK03080 phosphoserine aminotr 99.9 6.9E-26 1.5E-30 220.4 13.2 172 119-308 41-217 (378)
18 PRK02769 histidine decarboxyla 99.9 4.9E-25 1.1E-29 215.8 17.7 183 115-305 52-251 (380)
19 PRK02948 cysteine desulfurase; 99.9 1.1E-24 2.4E-29 210.0 18.8 171 121-302 38-216 (381)
20 PLN02409 serine--glyoxylate am 99.9 8.3E-25 1.8E-29 214.2 18.1 193 107-305 22-221 (401)
21 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-24 2.4E-29 208.0 18.5 171 121-303 37-217 (353)
22 PRK14012 cysteine desulfurase; 99.9 1.4E-24 3E-29 211.8 19.5 169 125-305 48-225 (404)
23 TIGR01788 Glu-decarb-GAD gluta 99.9 6.5E-25 1.4E-29 218.2 15.7 174 115-301 71-277 (431)
24 PLN03032 serine decarboxylase; 99.9 1.8E-24 3.8E-29 211.6 15.3 183 114-304 52-253 (374)
25 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.4E-23 3E-28 201.0 19.8 168 125-302 43-216 (376)
26 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.7E-23 5.8E-28 200.9 19.2 172 125-307 59-238 (397)
27 PRK13479 2-aminoethylphosphona 99.9 1.1E-22 2.4E-27 195.1 19.4 189 109-304 20-212 (368)
28 cd00611 PSAT_like Phosphoserin 99.9 4.8E-24 1E-28 205.7 9.0 168 122-308 40-215 (355)
29 cd06451 AGAT_like Alanine-glyo 99.9 1.9E-22 4E-27 192.1 18.3 189 106-304 11-205 (356)
30 cd06453 SufS_like Cysteine des 99.9 1.8E-22 3.8E-27 193.4 18.1 175 121-305 38-220 (373)
31 PTZ00094 serine hydroxymethylt 99.9 1.3E-22 2.9E-27 201.9 15.5 173 120-303 73-262 (452)
32 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.4E-21 3.1E-26 184.6 19.5 173 125-304 30-206 (355)
33 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.8E-21 2.1E-25 184.3 19.7 174 121-304 58-239 (387)
34 TIGR01366 serC_3 phosphoserine 99.9 1.8E-21 3.8E-26 188.8 14.0 168 118-305 33-205 (361)
35 TIGR01364 serC_1 phosphoserine 99.8 1.6E-20 3.5E-25 181.7 12.5 165 124-308 35-207 (349)
36 PLN02414 glycine dehydrogenase 99.8 3.6E-20 7.7E-25 199.0 15.9 169 126-305 568-754 (993)
37 PRK05355 3-phosphoserine/phosp 99.8 3E-20 6.6E-25 180.4 12.1 170 121-308 43-218 (360)
38 PRK13520 L-tyrosine decarboxyl 99.8 9.5E-19 2.1E-23 167.0 17.5 164 126-301 59-236 (371)
39 COG0075 Serine-pyruvate aminot 99.8 1.7E-18 3.6E-23 169.5 18.1 189 109-305 20-213 (383)
40 PRK08134 O-acetylhomoserine am 99.8 1.9E-18 4.2E-23 172.0 18.5 160 121-300 59-226 (433)
41 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2.2E-18 4.7E-23 165.5 16.9 169 126-304 44-220 (361)
42 TIGR03812 tyr_de_CO2_Arch tyro 99.8 9.8E-18 2.1E-22 160.4 18.4 164 126-300 59-240 (373)
43 cd01494 AAT_I Aspartate aminot 99.8 2.4E-17 5.3E-22 138.1 16.9 160 128-299 2-170 (170)
44 cd06450 DOPA_deC_like DOPA dec 99.8 2.5E-18 5.4E-23 162.6 10.8 174 121-299 33-230 (345)
45 TIGR03799 NOD_PanD_pyr putativ 99.8 6E-18 1.3E-22 172.1 13.8 175 121-301 124-349 (522)
46 TIGR01437 selA_rel uncharacter 99.7 1.9E-17 4.2E-22 160.6 15.4 168 118-304 39-227 (363)
47 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 8.5E-17 1.8E-21 155.7 19.0 170 127-305 52-228 (370)
48 cd00613 GDC-P Glycine cleavage 99.7 5.4E-17 1.2E-21 156.8 16.3 169 126-305 64-245 (398)
49 PRK00451 glycine dehydrogenase 99.7 2.5E-16 5.4E-21 155.7 14.6 168 125-305 111-289 (447)
50 PRK00011 glyA serine hydroxyme 99.7 3.1E-16 6.7E-21 153.4 12.9 166 121-299 65-241 (416)
51 PRK05613 O-acetylhomoserine am 99.7 1.6E-15 3.5E-20 151.3 16.9 162 121-300 64-232 (437)
52 cd00615 Orn_deC_like Ornithine 99.7 1.3E-15 2.8E-20 143.3 14.3 167 126-302 59-237 (294)
53 cd00616 AHBA_syn 3-amino-5-hyd 99.6 1.7E-14 3.7E-19 136.6 20.2 159 127-300 19-182 (352)
54 PLN02452 phosphoserine transam 99.6 1E-15 2.2E-20 149.5 11.8 169 118-306 44-220 (365)
55 TIGR01329 cysta_beta_ly_E cyst 99.6 6.6E-15 1.4E-19 143.9 17.4 156 127-302 48-211 (378)
56 PRK04366 glycine dehydrogenase 99.6 3.1E-15 6.8E-20 150.6 15.5 168 126-305 113-296 (481)
57 PRK08114 cystathionine beta-ly 99.6 4.5E-15 9.7E-20 146.5 16.0 162 121-301 57-228 (395)
58 PLN02271 serine hydroxymethylt 99.6 6.9E-15 1.5E-19 149.8 17.7 168 127-303 195-378 (586)
59 PRK11658 UDP-4-amino-4-deoxy-L 99.6 1.6E-14 3.5E-19 140.8 18.9 175 105-299 16-194 (379)
60 cd00378 SHMT Serine-glycine hy 99.6 4.5E-15 9.8E-20 144.0 14.7 167 121-299 59-238 (402)
61 PRK05937 8-amino-7-oxononanoat 99.6 1.1E-14 2.4E-19 141.0 16.6 165 120-300 46-226 (370)
62 TIGR00474 selA seryl-tRNA(sec) 99.6 1.5E-14 3.2E-19 145.1 17.5 162 126-304 122-306 (454)
63 TIGR03588 PseC UDP-4-keto-6-de 99.6 2.3E-14 4.9E-19 139.0 18.0 152 128-290 31-190 (380)
64 PRK04311 selenocysteine syntha 99.6 1.9E-14 4.2E-19 144.6 16.8 162 126-304 127-311 (464)
65 PLN03226 serine hydroxymethylt 99.6 4.2E-14 9E-19 142.6 17.8 174 120-303 73-263 (475)
66 PLN02880 tyrosine decarboxylas 99.6 4.9E-14 1.1E-18 142.5 17.8 192 105-300 95-322 (490)
67 PLN02414 glycine dehydrogenase 99.6 2E-14 4.4E-19 155.0 15.7 180 106-308 119-321 (993)
68 PRK05367 glycine dehydrogenase 99.6 1.7E-14 3.7E-19 155.5 14.9 156 128-305 123-291 (954)
69 KOG2862 Alanine-glyoxylate ami 99.6 7E-14 1.5E-18 132.7 15.5 191 105-304 28-224 (385)
70 PRK07812 O-acetylhomoserine am 99.6 1.2E-13 2.6E-18 137.9 17.8 159 125-302 68-234 (436)
71 TIGR01365 serC_2 phosphoserine 99.6 2.5E-14 5.3E-19 140.3 11.7 169 119-305 32-205 (374)
72 PRK08133 O-succinylhomoserine 99.6 1.5E-13 3.2E-18 134.9 17.2 160 121-300 56-224 (390)
73 TIGR01822 2am3keto_CoA 2-amino 99.5 1.6E-13 3.5E-18 132.6 16.3 162 126-304 83-258 (393)
74 PRK08064 cystathionine beta-ly 99.5 3E-13 6.4E-18 132.8 17.8 160 121-300 49-216 (390)
75 TIGR01324 cysta_beta_ly_B cyst 99.5 2E-13 4.4E-18 133.7 16.6 162 122-302 46-215 (377)
76 PRK08248 O-acetylhomoserine am 99.5 2.9E-13 6.2E-18 134.9 17.7 160 122-301 60-227 (431)
77 PLN02263 serine decarboxylase 99.5 5.5E-13 1.2E-17 134.1 17.8 174 123-303 130-319 (470)
78 PLN02721 threonine aldolase 99.5 2E-13 4.3E-18 129.3 13.8 166 128-302 42-224 (353)
79 PRK05367 glycine dehydrogenase 99.5 3.1E-13 6.7E-18 145.9 16.9 165 126-303 542-726 (954)
80 TIGR02379 ECA_wecE TDP-4-keto- 99.5 1.2E-12 2.6E-17 128.0 19.5 157 128-299 33-195 (376)
81 PRK08861 cystathionine gamma-s 99.5 5.9E-13 1.3E-17 131.1 17.3 159 122-299 49-215 (388)
82 cd06454 KBL_like KBL_like; thi 99.5 3.1E-13 6.8E-18 127.6 14.7 161 125-302 45-217 (349)
83 PRK07179 hypothetical protein; 99.5 4.1E-13 8.9E-18 131.3 15.8 153 129-303 102-267 (407)
84 PRK05994 O-acetylhomoserine am 99.5 9.6E-13 2.1E-17 130.8 18.6 156 127-301 64-226 (427)
85 PRK13580 serine hydroxymethylt 99.5 1.7E-13 3.7E-18 138.3 12.2 173 120-304 88-304 (493)
86 PRK09028 cystathionine beta-ly 99.5 1.1E-12 2.4E-17 129.5 17.5 154 127-299 62-223 (394)
87 cd06502 TA_like Low-specificit 99.5 4.9E-13 1.1E-17 126.0 13.5 168 126-303 32-213 (338)
88 TIGR01141 hisC histidinol-phos 99.5 3.3E-13 7.1E-18 128.3 12.2 164 129-304 57-230 (346)
89 PRK12566 glycine dehydrogenase 99.5 4E-13 8.7E-18 143.5 13.2 163 127-300 544-719 (954)
90 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.3E-12 5E-17 127.6 17.6 160 122-301 53-220 (418)
91 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 4.2E-12 9E-17 123.5 18.9 154 129-299 34-194 (375)
92 PRK05939 hypothetical protein; 99.5 3E-12 6.5E-17 126.3 17.8 159 121-299 42-207 (397)
93 COG3844 Kynureninase [Amino ac 99.5 9.6E-13 2.1E-17 125.7 13.6 167 129-309 79-253 (407)
94 TIGR00461 gcvP glycine dehydro 99.4 1.9E-12 4.1E-17 138.8 16.0 168 126-303 530-714 (939)
95 PRK07503 methionine gamma-lyas 99.4 2.2E-12 4.7E-17 127.3 15.3 162 121-301 60-229 (403)
96 PRK08249 cystathionine gamma-s 99.4 3.5E-12 7.5E-17 125.8 16.6 160 121-299 59-225 (398)
97 PRK13034 serine hydroxymethylt 99.4 2.5E-12 5.3E-17 127.3 15.4 169 121-300 68-245 (416)
98 cd00609 AAT_like Aspartate ami 99.4 2.5E-12 5.5E-17 119.9 14.7 161 129-300 39-220 (350)
99 TIGR02080 O_succ_thio_ly O-suc 99.4 6.1E-12 1.3E-16 123.4 17.5 160 122-300 47-214 (382)
100 PRK08045 cystathionine gamma-s 99.4 5.9E-12 1.3E-16 123.7 17.4 159 122-299 48-214 (386)
101 COG0076 GadB Glutamate decarbo 99.4 1.9E-12 4.2E-17 130.1 14.3 170 124-301 99-292 (460)
102 PRK07811 cystathionine gamma-s 99.4 3.4E-12 7.4E-17 125.2 15.5 157 126-301 61-225 (388)
103 TIGR01325 O_suc_HS_sulf O-succ 99.4 6.8E-12 1.5E-16 122.6 17.3 162 121-301 49-218 (380)
104 PRK06225 aspartate aminotransf 99.4 3.6E-12 7.9E-17 123.3 15.3 163 128-304 68-245 (380)
105 PRK08776 cystathionine gamma-s 99.4 8.6E-12 1.9E-16 123.3 18.1 160 122-300 56-223 (405)
106 PRK07504 O-succinylhomoserine 99.4 7.1E-12 1.5E-16 123.5 17.1 159 122-299 61-226 (398)
107 PRK08574 cystathionine gamma-s 99.4 6E-12 1.3E-16 123.5 16.5 158 122-300 49-215 (385)
108 PRK07050 cystathionine beta-ly 99.4 7.3E-12 1.6E-16 123.3 17.1 161 121-300 60-228 (394)
109 cd00614 CGS_like CGS_like: Cys 99.4 8.4E-12 1.8E-16 121.2 17.3 161 121-300 35-203 (369)
110 PRK07810 O-succinylhomoserine 99.4 8.9E-12 1.9E-16 123.1 17.1 160 122-301 66-234 (403)
111 PRK06176 cystathionine gamma-s 99.4 9.1E-12 2E-16 122.1 17.0 158 122-299 46-211 (380)
112 PLN02590 probable tyrosine dec 99.4 2.4E-11 5.3E-16 124.3 20.7 194 105-301 143-371 (539)
113 PRK06767 methionine gamma-lyas 99.4 7.2E-12 1.6E-16 122.7 15.7 159 126-303 61-227 (386)
114 PRK05968 hypothetical protein; 99.4 8.3E-12 1.8E-16 122.5 16.1 158 125-302 62-227 (389)
115 PF00282 Pyridoxal_deC: Pyrido 99.4 9.9E-12 2.1E-16 121.8 16.3 176 122-302 75-279 (373)
116 TIGR01328 met_gam_lyase methio 99.4 9.1E-12 2E-16 122.4 15.8 162 122-302 55-224 (391)
117 PF01041 DegT_DnrJ_EryC1: DegT 99.4 2.8E-11 6.1E-16 117.2 18.7 173 107-300 9-189 (363)
118 PRK07582 cystathionine gamma-l 99.4 1.4E-11 2.9E-16 120.0 15.9 148 127-299 52-209 (366)
119 PRK12462 phosphoserine aminotr 99.4 8.2E-12 1.8E-16 122.2 14.3 169 118-305 41-217 (364)
120 PRK06460 hypothetical protein; 99.4 1.2E-11 2.5E-16 121.0 15.1 163 121-302 40-210 (376)
121 PRK15407 lipopolysaccharide bi 99.4 5.6E-11 1.2E-15 118.7 19.7 159 128-302 65-237 (438)
122 PLN02509 cystathionine beta-ly 99.3 3.7E-11 8E-16 121.0 17.5 155 127-301 134-296 (464)
123 PRK02731 histidinol-phosphate 99.3 1.7E-11 3.8E-16 117.6 14.0 161 129-303 70-244 (367)
124 PRK13238 tnaA tryptophanase/L- 99.3 3.3E-11 7.2E-16 121.1 16.3 173 114-300 69-274 (460)
125 TIGR03531 selenium_SpcS O-phos 99.3 1.5E-10 3.3E-15 116.0 20.6 169 125-300 104-288 (444)
126 PRK06084 O-acetylhomoserine am 99.3 4E-11 8.6E-16 119.4 16.2 160 121-299 53-219 (425)
127 TIGR00858 bioF 8-amino-7-oxono 99.3 4E-11 8.6E-16 113.4 15.0 159 126-302 61-232 (360)
128 PRK00950 histidinol-phosphate 99.3 1.8E-11 3.9E-16 117.1 12.5 162 129-303 72-242 (361)
129 PRK07671 cystathionine beta-ly 99.3 1.3E-10 2.9E-15 113.7 17.9 160 121-300 45-212 (377)
130 PRK06234 methionine gamma-lyas 99.3 6.9E-11 1.5E-15 116.5 15.8 157 127-302 65-231 (400)
131 COG1103 Archaea-specific pyrid 99.3 6.8E-11 1.5E-15 111.0 14.6 168 128-304 63-237 (382)
132 PRK07908 hypothetical protein; 99.3 7.8E-11 1.7E-15 112.8 15.3 155 128-304 60-224 (349)
133 PRK05957 aspartate aminotransf 99.3 9.9E-11 2.1E-15 114.0 15.4 167 126-303 69-252 (389)
134 PRK08960 hypothetical protein; 99.3 1.1E-10 2.4E-15 113.4 15.0 163 129-303 72-253 (387)
135 PRK08361 aspartate aminotransf 99.3 6.6E-11 1.4E-15 115.1 13.4 163 129-303 73-256 (391)
136 PRK08056 threonine-phosphate d 99.2 2E-10 4.3E-15 110.5 15.6 159 128-299 57-227 (356)
137 PRK06939 2-amino-3-ketobutyrat 99.2 1.6E-10 3.5E-15 111.2 14.9 161 126-303 87-261 (397)
138 PRK14807 histidinol-phosphate 99.2 2.5E-10 5.5E-15 109.6 16.1 162 129-302 62-231 (351)
139 PRK06108 aspartate aminotransf 99.2 1.8E-10 4E-15 110.7 15.0 161 130-303 65-251 (382)
140 PLN02242 methionine gamma-lyas 99.2 1.6E-10 3.5E-15 114.8 14.9 164 120-302 70-242 (418)
141 PRK05958 8-amino-7-oxononanoat 99.2 3E-10 6.4E-15 108.8 16.1 157 126-301 84-253 (385)
142 TIGR01825 gly_Cac_T_rel pyrido 99.2 2E-10 4.3E-15 110.6 14.9 159 125-302 77-248 (385)
143 PRK06836 aspartate aminotransf 99.2 3.3E-10 7.1E-15 110.6 16.5 163 128-302 75-262 (394)
144 TIGR03537 DapC succinyldiamino 99.2 3.7E-10 8.1E-15 108.3 16.2 163 130-302 40-224 (350)
145 PLN02483 serine palmitoyltrans 99.2 2.7E-10 5.9E-15 115.2 15.8 162 125-303 145-327 (489)
146 PRK09105 putative aminotransfe 99.2 2.2E-10 4.8E-15 111.3 14.3 163 128-304 80-253 (370)
147 PRK05967 cystathionine beta-ly 99.2 5.5E-10 1.2E-14 110.5 16.9 160 122-300 60-227 (395)
148 PRK05764 aspartate aminotransf 99.2 4E-10 8.6E-15 109.1 14.7 162 129-302 71-256 (393)
149 PRK08912 hypothetical protein; 99.2 5.7E-10 1.2E-14 108.3 15.5 163 130-303 67-251 (387)
150 PRK06434 cystathionine gamma-l 99.2 8.6E-10 1.9E-14 108.7 16.4 150 127-298 65-221 (384)
151 PF00464 SHMT: Serine hydroxym 99.2 2.4E-10 5.1E-15 113.1 12.0 169 121-299 60-245 (399)
152 PRK03321 putative aminotransfe 99.2 2.2E-10 4.7E-15 109.6 11.2 164 128-303 59-235 (352)
153 PRK07269 cystathionine gamma-s 99.2 1.2E-09 2.6E-14 106.6 16.4 157 122-300 50-214 (364)
154 PRK07324 transaminase; Validat 99.1 8.6E-10 1.9E-14 107.1 15.1 162 130-302 66-240 (373)
155 TIGR01140 L_thr_O3P_dcar L-thr 99.1 3.2E-10 6.9E-15 108.2 11.8 152 129-303 50-213 (330)
156 PRK09265 aminotransferase AlaT 99.1 2.9E-09 6.2E-14 104.2 18.3 158 130-299 76-255 (404)
157 PRK07337 aminotransferase; Val 99.1 9.6E-10 2.1E-14 106.7 14.8 162 129-303 70-251 (388)
158 PRK07681 aspartate aminotransf 99.1 1.2E-09 2.6E-14 106.7 15.3 164 129-303 72-258 (399)
159 PRK03158 histidinol-phosphate 99.1 5.7E-10 1.2E-14 106.9 12.8 162 128-303 66-241 (359)
160 PRK07309 aromatic amino acid a 99.1 8.4E-10 1.8E-14 107.6 14.1 168 129-303 70-256 (391)
161 TIGR03540 DapC_direct LL-diami 99.1 1.8E-09 3.9E-14 104.5 16.2 164 129-303 70-256 (383)
162 PRK08247 cystathionine gamma-s 99.1 3.3E-09 7.1E-14 103.2 17.9 159 121-299 47-212 (366)
163 PRK06702 O-acetylhomoserine am 99.1 4.5E-09 9.8E-14 105.2 18.8 155 126-299 61-223 (432)
164 PRK05387 histidinol-phosphate 99.1 6.9E-10 1.5E-14 105.8 12.3 158 129-303 63-229 (353)
165 PF01212 Beta_elim_lyase: Beta 99.1 3.6E-10 7.7E-15 107.5 10.0 184 105-301 11-210 (290)
166 TIGR01265 tyr_nico_aTase tyros 99.1 2.8E-09 6.2E-14 104.3 16.5 160 128-299 75-256 (403)
167 PRK04635 histidinol-phosphate 99.1 3.7E-10 8.1E-15 108.5 9.8 161 129-304 63-234 (354)
168 PLN03026 histidinol-phosphate 99.1 1.4E-09 3E-14 106.1 13.7 162 129-303 89-259 (380)
169 PRK05942 aspartate aminotransf 99.1 1.5E-09 3.3E-14 105.8 13.5 163 130-303 77-262 (394)
170 PRK07568 aspartate aminotransf 99.1 9.5E-09 2.1E-13 99.7 18.8 161 129-299 69-250 (397)
171 PRK07550 hypothetical protein; 99.1 2.2E-09 4.8E-14 104.1 14.2 163 130-303 71-255 (386)
172 PRK07683 aminotransferase A; V 99.1 4.7E-09 1E-13 102.3 16.0 164 129-302 68-251 (387)
173 PRK08363 alanine aminotransfer 99.1 5.9E-09 1.3E-13 101.7 16.7 159 129-298 73-251 (398)
174 TIGR03811 tyr_de_CO2_Ent tyros 99.1 4.7E-09 1E-13 109.0 16.5 194 103-302 94-400 (608)
175 COG0399 WecE Predicted pyridox 99.0 1.4E-08 3.1E-13 99.7 18.9 178 105-301 17-198 (374)
176 PRK12414 putative aminotransfe 99.0 1.5E-08 3.4E-13 98.5 18.2 167 127-303 71-254 (384)
177 PRK09276 LL-diaminopimelate am 99.0 6.7E-09 1.5E-13 100.6 15.1 164 129-303 72-258 (385)
178 cd00617 Tnase_like Tryptophana 99.0 1.2E-08 2.5E-13 102.2 16.8 177 109-300 39-249 (431)
179 PRK07777 aminotransferase; Val 99.0 1.1E-08 2.4E-13 99.3 16.2 163 130-303 65-251 (387)
180 PRK07682 hypothetical protein; 99.0 3.6E-09 7.8E-14 102.2 12.6 164 129-304 60-246 (378)
181 PRK03967 histidinol-phosphate 99.0 4.4E-09 9.5E-14 100.7 13.0 160 128-303 57-223 (337)
182 PRK05166 histidinol-phosphate 99.0 1E-08 2.2E-13 99.2 15.5 157 130-299 75-246 (371)
183 PRK13355 bifunctional HTH-doma 99.0 1.2E-08 2.6E-13 103.6 16.5 160 128-299 187-368 (517)
184 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 5.2E-09 1.1E-13 104.2 12.9 169 126-302 66-257 (417)
185 PRK04870 histidinol-phosphate 99.0 5.6E-09 1.2E-13 100.1 12.5 163 129-302 66-235 (356)
186 TIGR03576 pyridox_MJ0158 pyrid 99.0 1.6E-08 3.5E-13 98.1 15.3 157 126-304 54-222 (346)
187 PRK09082 methionine aminotrans 99.0 1.9E-08 4.1E-13 97.9 15.8 164 129-302 74-254 (386)
188 PRK06207 aspartate aminotransf 98.9 2E-08 4.4E-13 98.7 15.7 163 130-302 86-269 (405)
189 KOG2142 Molybdenum cofactor su 98.9 3.9E-10 8.4E-15 115.3 3.5 170 131-303 181-363 (728)
190 PLN02822 serine palmitoyltrans 98.9 2.3E-08 5E-13 101.1 16.2 163 126-304 154-333 (481)
191 PRK13237 tyrosine phenol-lyase 98.9 6.8E-08 1.5E-12 97.1 18.6 178 109-300 64-274 (460)
192 PLN00175 aminotransferase fami 98.9 3.2E-08 6.9E-13 97.7 15.5 163 130-302 95-277 (413)
193 cd00610 OAT_like Acetyl ornith 98.9 1.7E-08 3.7E-13 98.0 13.2 174 124-304 77-279 (413)
194 PRK10534 L-threonine aldolase; 98.9 1E-08 2.2E-13 97.1 11.3 165 128-302 36-213 (333)
195 TIGR02618 tyr_phenol_ly tyrosi 98.9 7.4E-08 1.6E-12 96.7 17.8 179 105-298 52-264 (450)
196 PRK09064 5-aminolevulinate syn 98.9 3.3E-08 7E-13 96.6 14.9 161 125-302 90-263 (407)
197 TIGR01821 5aminolev_synth 5-am 98.9 4.3E-08 9.2E-13 95.8 15.6 159 127-302 91-262 (402)
198 PLN03227 serine palmitoyltrans 98.9 5.1E-08 1.1E-12 95.8 16.2 163 127-302 44-225 (392)
199 PRK01688 histidinol-phosphate 98.9 9.5E-09 2.1E-13 98.9 10.6 161 129-303 60-232 (351)
200 TIGR01264 tyr_amTase_E tyrosin 98.9 7.9E-08 1.7E-12 93.9 16.7 160 129-300 76-256 (401)
201 PRK13392 5-aminolevulinate syn 98.9 4.5E-08 9.8E-13 95.9 14.9 158 128-303 93-264 (410)
202 PLN02187 rooty/superroot1 98.9 6.9E-08 1.5E-12 97.0 16.5 160 128-299 110-291 (462)
203 PLN00145 tyrosine/nicotianamin 98.9 9.3E-08 2E-12 95.1 16.9 160 128-299 96-277 (430)
204 PLN02656 tyrosine transaminase 98.9 8.4E-08 1.8E-12 94.4 16.4 160 129-299 76-256 (409)
205 PRK13393 5-aminolevulinate syn 98.9 6.9E-08 1.5E-12 94.7 15.7 157 127-301 91-261 (406)
206 PTZ00433 tyrosine aminotransfe 98.9 1.1E-07 2.3E-12 93.6 16.9 159 129-298 78-263 (412)
207 COG2008 GLY1 Threonine aldolas 98.8 3.3E-08 7.2E-13 95.6 12.2 159 128-298 37-211 (342)
208 PLN00143 tyrosine/nicotianamin 98.8 2.2E-07 4.9E-12 91.4 16.1 160 130-299 78-257 (409)
209 PRK06348 aspartate aminotransf 98.8 1.4E-07 3E-12 91.8 14.4 161 130-302 70-252 (384)
210 PRK03317 histidinol-phosphate 98.8 5.4E-08 1.2E-12 93.8 11.5 163 129-303 68-247 (368)
211 PRK06358 threonine-phosphate d 98.8 2.6E-07 5.6E-12 89.1 16.1 158 128-299 56-228 (354)
212 PRK08153 histidinol-phosphate 98.8 1.7E-07 3.7E-12 90.8 14.5 162 128-302 69-241 (369)
213 TIGR03538 DapC_gpp succinyldia 98.8 1.9E-07 4.1E-12 91.0 14.8 163 129-302 67-262 (393)
214 COG1932 SerC Phosphoserine ami 98.7 5.7E-08 1.2E-12 94.3 10.2 171 117-306 41-220 (365)
215 KOG3846 L-kynurenine hydrolase 98.7 3.8E-08 8.1E-13 94.1 8.3 173 130-308 115-300 (465)
216 PF00155 Aminotran_1_2: Aminot 98.7 2.6E-07 5.5E-12 88.1 14.2 168 128-302 46-239 (363)
217 PRK07049 methionine gamma-lyas 98.7 4.7E-07 1E-11 90.3 16.5 160 128-301 85-259 (427)
218 PRK04781 histidinol-phosphate 98.7 3.1E-07 6.8E-12 89.0 14.5 164 129-303 62-239 (364)
219 PRK09148 aminotransferase; Val 98.7 2E-07 4.3E-12 91.6 13.1 164 130-303 72-257 (405)
220 PRK06107 aspartate aminotransf 98.7 3.6E-07 7.9E-12 89.5 14.9 165 129-303 77-260 (402)
221 PLN02376 1-aminocyclopropane-1 98.7 3.9E-07 8.4E-12 92.6 15.1 167 129-300 97-295 (496)
222 PRK15029 arginine decarboxylas 98.7 5.6E-07 1.2E-11 95.6 16.8 169 125-301 204-402 (755)
223 PRK08175 aminotransferase; Val 98.7 3.7E-07 8.1E-12 89.1 14.4 164 129-302 70-255 (395)
224 PRK01533 histidinol-phosphate 98.7 4.8E-07 1E-11 88.0 15.0 159 129-302 67-240 (366)
225 PF01053 Cys_Met_Meta_PP: Cys/ 98.7 9E-07 1.9E-11 87.5 16.9 161 121-300 50-219 (386)
226 PRK06290 aspartate aminotransf 98.7 1.3E-06 2.9E-11 86.3 18.2 164 129-303 84-270 (410)
227 KOG2142 Molybdenum cofactor su 98.7 1.3E-08 2.7E-13 104.4 3.8 204 57-302 23-240 (728)
228 PRK00854 rocD ornithine--oxo-a 98.6 1.1E-06 2.3E-11 85.8 16.0 162 125-304 82-276 (401)
229 PRK14809 histidinol-phosphate 98.6 7.3E-07 1.6E-11 85.6 14.3 162 129-303 68-241 (357)
230 PRK08068 transaminase; Reviewe 98.6 1E-06 2.2E-11 85.8 14.8 163 130-303 74-259 (389)
231 PTZ00377 alanine aminotransfer 98.6 6.9E-07 1.5E-11 89.9 13.1 166 128-298 117-314 (481)
232 COG0112 GlyA Glycine/serine hy 98.6 3.1E-07 6.7E-12 90.2 10.1 165 121-299 66-242 (413)
233 COG2873 MET17 O-acetylhomoseri 98.5 1.8E-06 3.9E-11 84.4 14.5 160 129-306 65-230 (426)
234 PTZ00125 ornithine aminotransf 98.5 1.5E-06 3.2E-11 84.6 14.2 163 125-304 72-267 (400)
235 PRK07366 succinyldiaminopimela 98.5 1.6E-06 3.4E-11 84.3 13.9 165 129-303 71-258 (388)
236 TIGR03539 DapC_actino succinyl 98.5 1.4E-06 2.9E-11 84.0 13.3 151 130-302 60-235 (357)
237 PRK02610 histidinol-phosphate 98.5 3.3E-06 7.1E-11 82.0 15.3 166 129-302 69-252 (374)
238 COG1921 SelA Selenocysteine sy 98.5 1.4E-06 3E-11 86.0 12.3 155 137-305 76-242 (395)
239 TIGR00461 gcvP glycine dehydro 98.5 2.3E-06 5.1E-11 92.6 15.0 158 128-305 111-279 (939)
240 PRK09147 succinyldiaminopimela 98.5 4.2E-06 9.1E-11 81.6 15.6 164 130-303 69-264 (396)
241 PRK08636 aspartate aminotransf 98.5 3.8E-06 8.3E-11 82.3 15.2 167 130-302 75-266 (403)
242 PRK03244 argD acetylornithine 98.5 2.7E-06 5.7E-11 83.0 13.6 161 128-304 87-271 (398)
243 PRK07865 N-succinyldiaminopime 98.5 2.2E-06 4.8E-11 82.6 12.9 151 130-302 66-241 (364)
244 PRK15481 transcriptional regul 98.4 7.4E-06 1.6E-10 81.0 15.5 159 130-302 125-299 (431)
245 PRK06855 aminotransferase; Val 98.4 1.1E-05 2.4E-10 80.2 16.5 161 129-298 76-257 (433)
246 PRK07392 threonine-phosphate d 98.4 4.3E-06 9.4E-11 80.5 13.1 160 129-302 60-234 (360)
247 PRK07505 hypothetical protein; 98.4 2.1E-05 4.5E-10 77.1 17.8 158 121-298 86-262 (402)
248 TIGR00707 argD acetylornithine 98.4 5.4E-06 1.2E-10 79.7 13.3 166 125-304 68-258 (379)
249 PRK13578 ornithine decarboxyla 98.4 8.8E-06 1.9E-10 86.1 15.4 170 126-303 174-373 (720)
250 COG0156 BioF 7-keto-8-aminopel 98.3 1.4E-05 3.1E-10 79.1 15.5 156 127-299 85-253 (388)
251 PF03841 SelA: L-seryl-tRNA se 98.3 2.5E-07 5.5E-12 90.4 3.0 160 129-304 50-231 (367)
252 COG1167 ARO8 Transcriptional r 98.3 1.7E-05 3.6E-10 80.0 15.3 162 130-302 136-316 (459)
253 PLN02607 1-aminocyclopropane-1 98.3 6.4E-06 1.4E-10 82.6 12.2 165 129-299 98-294 (447)
254 PRK04073 rocD ornithine--oxo-a 98.3 1.8E-05 3.9E-10 77.5 14.3 161 126-304 82-275 (396)
255 TIGR03542 DAPAT_plant LL-diami 98.3 1.4E-05 3E-10 78.4 13.2 158 129-303 78-265 (402)
256 PLN02450 1-aminocyclopropane-1 98.2 1.2E-05 2.6E-10 81.1 12.4 167 130-301 90-289 (468)
257 COG0436 Aspartate/tyrosine/aro 98.2 4E-05 8.6E-10 75.9 15.8 159 130-299 69-251 (393)
258 PRK05664 threonine-phosphate d 98.2 3.6E-05 7.9E-10 73.5 14.7 148 130-303 53-211 (330)
259 PLN02368 alanine transaminase 98.2 1.6E-05 3.6E-10 78.8 12.8 163 130-298 111-306 (407)
260 KOG1368 Threonine aldolase [Am 98.2 2.7E-06 5.9E-11 81.2 6.8 162 131-300 61-238 (384)
261 PRK09257 aromatic amino acid a 98.2 3.2E-05 6.9E-10 75.5 14.4 162 129-298 72-260 (396)
262 PRK05839 hypothetical protein; 98.2 4.9E-05 1.1E-09 73.9 15.2 160 130-302 64-250 (374)
263 PRK08354 putative aminotransfe 98.2 9.9E-05 2.1E-09 69.9 16.2 148 129-298 43-196 (311)
264 PLN02231 alanine transaminase 98.1 4.8E-05 1E-09 78.2 14.9 169 128-298 170-366 (534)
265 KOG0259 Tyrosine aminotransfer 98.1 2.9E-05 6.2E-10 76.3 12.3 165 128-300 105-287 (447)
266 PRK02627 acetylornithine amino 98.1 4.5E-05 9.8E-10 73.9 13.4 163 125-304 80-270 (396)
267 PRK14808 histidinol-phosphate 98.1 3.6E-05 7.7E-10 73.9 12.3 154 128-303 58-221 (335)
268 PRK01278 argD acetylornithine 98.1 6.3E-05 1.4E-09 73.2 13.8 162 127-304 74-263 (389)
269 PRK09440 avtA valine--pyruvate 98.1 2.2E-05 4.8E-10 76.9 10.3 159 130-302 78-266 (416)
270 PRK07590 L,L-diaminopimelate a 98.0 6.3E-05 1.4E-09 73.9 12.9 157 130-304 80-269 (409)
271 PRK06959 putative threonine-ph 98.0 8.9E-05 1.9E-09 71.4 13.2 153 129-303 56-217 (339)
272 KOG1383 Glutamate decarboxylas 98.0 6.7E-05 1.5E-09 75.2 12.5 166 128-301 122-305 (491)
273 PRK06425 histidinol-phosphate 98.0 8.7E-05 1.9E-09 70.9 13.0 157 129-303 43-212 (332)
274 PRK15400 lysine decarboxylase 98.0 8.8E-05 1.9E-09 78.6 13.9 166 126-301 195-383 (714)
275 PRK15399 lysine decarboxylase 98.0 0.00026 5.6E-09 75.1 17.3 166 126-301 195-383 (713)
276 KOG0053 Cystathionine beta-lya 98.0 0.00032 7E-09 69.7 16.0 151 130-299 81-239 (409)
277 TIGR02617 tnaA_trp_ase tryptop 97.9 0.00011 2.4E-09 74.0 12.8 178 114-301 65-281 (467)
278 PLN02955 8-amino-7-oxononanoat 97.9 0.00051 1.1E-08 69.9 17.3 156 128-300 149-332 (476)
279 COG1003 GcvP Glycine cleavage 97.9 0.00024 5.3E-09 70.9 13.9 162 126-305 109-292 (496)
280 PRK08637 hypothetical protein; 97.9 0.00029 6.2E-09 68.8 14.4 166 129-299 47-242 (388)
281 PLN02624 ornithine-delta-amino 97.8 0.00039 8.5E-09 70.4 14.9 166 123-303 114-312 (474)
282 TIGR03801 asp_4_decarbox aspar 97.8 0.00089 1.9E-08 68.9 17.4 147 147-301 157-327 (521)
283 PRK03715 argD acetylornithine 97.8 0.0003 6.4E-09 69.5 13.3 149 147-303 95-266 (395)
284 TIGR01885 Orn_aminotrans ornit 97.8 0.00067 1.4E-08 66.5 15.7 165 125-303 78-274 (401)
285 PRK04260 acetylornithine amino 97.7 0.00034 7.4E-09 67.8 12.0 163 129-304 69-253 (375)
286 PRK09275 aspartate aminotransf 97.7 0.00073 1.6E-08 69.6 14.5 148 146-301 162-328 (527)
287 COG0626 MetC Cystathionine bet 97.6 0.0027 5.8E-08 63.3 16.9 151 130-298 67-224 (396)
288 KOG0257 Kynurenine aminotransf 97.6 0.00078 1.7E-08 66.9 12.8 170 121-299 68-260 (420)
289 KOG1360 5-aminolevulinate synt 97.6 0.00053 1.2E-08 68.1 11.3 149 130-297 220-382 (570)
290 COG0079 HisC Histidinol-phosph 97.6 0.0017 3.6E-08 63.8 14.8 161 128-303 59-231 (356)
291 COG1168 MalY Bifunctional PLP- 97.6 0.0035 7.6E-08 61.8 16.7 183 96-288 30-235 (388)
292 PF06838 Met_gamma_lyase: Meth 97.6 0.002 4.4E-08 63.4 14.9 158 131-302 59-241 (403)
293 PTZ00376 aspartate aminotransf 97.6 0.00077 1.7E-08 66.2 12.2 161 129-297 75-264 (404)
294 COG1982 LdcC Arginine/lysine/o 97.6 0.0019 4.2E-08 66.6 15.2 164 128-300 72-247 (557)
295 KOG0629 Glutamate decarboxylas 97.6 0.00034 7.4E-09 69.7 9.1 199 97-302 110-338 (510)
296 PF02347 GDC-P: Glycine cleava 97.5 0.00095 2.1E-08 67.1 11.9 157 128-305 112-282 (429)
297 PLN02672 methionine S-methyltr 97.5 0.0034 7.4E-08 69.5 17.1 167 128-301 736-927 (1082)
298 PRK05093 argD bifunctional N-s 97.5 0.0032 6.8E-08 61.9 15.2 157 128-304 84-272 (403)
299 PRK05964 adenosylmethionine--8 97.5 0.0012 2.5E-08 65.6 12.1 172 125-304 84-289 (423)
300 PRK02936 argD acetylornithine 97.4 0.0016 3.5E-08 62.9 11.7 159 130-304 71-255 (377)
301 TIGR03246 arg_catab_astC succi 97.3 0.0097 2.1E-07 58.5 15.4 161 125-304 76-267 (397)
302 PRK04013 argD acetylornithine/ 97.2 0.0074 1.6E-07 59.3 13.9 161 123-302 63-247 (364)
303 TIGR02407 ectoine_ectB diamino 97.2 0.018 3.9E-07 57.2 16.6 169 129-302 81-281 (412)
304 KOG2467 Glycine/serine hydroxy 97.2 0.0026 5.6E-08 62.7 10.0 172 121-303 80-269 (477)
305 PRK09264 diaminobutyrate--2-ox 97.2 0.014 3.1E-07 58.1 15.4 167 130-302 86-285 (425)
306 PRK05769 4-aminobutyrate amino 97.1 0.021 4.6E-07 57.3 16.1 76 225-304 222-309 (441)
307 COG0403 GcvP Glycine cleavage 97.0 0.02 4.3E-07 57.3 14.5 161 129-304 123-295 (450)
308 COG4992 ArgD Ornithine/acetylo 97.0 0.0096 2.1E-07 59.3 12.1 164 124-305 82-273 (404)
309 KOG0256 1-aminocyclopropane-1- 97.0 0.0041 8.9E-08 61.9 9.2 184 107-301 108-320 (471)
310 PRK12381 bifunctional succinyl 97.0 0.014 3.1E-07 57.5 13.2 162 125-304 80-271 (406)
311 COG4100 Cystathionine beta-lya 96.9 0.022 4.7E-07 55.2 13.5 142 135-288 74-237 (416)
312 TIGR03372 putres_am_tran putre 96.8 0.03 6.5E-07 56.5 14.0 167 125-304 116-313 (442)
313 TIGR00713 hemL glutamate-1-sem 96.8 0.012 2.5E-07 58.2 10.7 162 126-304 88-282 (423)
314 PRK11522 putrescine--2-oxoglut 96.7 0.023 5E-07 57.5 12.9 168 125-304 123-320 (459)
315 PRK06062 hypothetical protein; 96.7 0.042 9.2E-07 55.4 14.5 173 125-304 94-303 (451)
316 KOG2790 Phosphoserine aminotra 96.6 0.019 4.1E-07 55.1 10.5 166 118-305 44-224 (370)
317 PF05889 SLA_LP_auto_ag: Solub 96.6 0.0011 2.5E-08 65.5 2.4 161 131-297 61-244 (389)
318 PF00202 Aminotran_3: Aminotra 96.5 0.007 1.5E-07 58.6 7.4 180 121-306 54-267 (339)
319 PLN02760 4-aminobutyrate:pyruv 96.5 0.06 1.3E-06 55.2 14.3 90 210-305 247-350 (504)
320 PRK08117 4-aminobutyrate amino 96.5 0.063 1.4E-06 53.5 14.1 174 124-304 84-295 (433)
321 PRK00062 glutamate-1-semialdeh 96.5 0.021 4.4E-07 56.9 10.5 167 126-304 90-284 (426)
322 PRK08360 4-aminobutyrate amino 96.3 0.13 2.9E-06 51.7 15.1 165 130-304 88-292 (443)
323 PRK06058 4-aminobutyrate amino 96.2 0.15 3.3E-06 51.1 14.9 76 225-304 220-307 (443)
324 PRK06105 aminotransferase; Pro 96.1 0.093 2E-06 53.1 12.7 89 210-304 205-307 (460)
325 PRK07495 4-aminobutyrate amino 96.0 0.36 7.8E-06 48.3 16.6 176 125-304 82-286 (425)
326 PRK07678 aminotransferase; Val 95.9 0.11 2.4E-06 52.4 12.4 168 127-304 90-302 (451)
327 PRK13360 omega amino acid--pyr 95.9 0.13 2.9E-06 51.7 12.9 171 125-303 88-303 (442)
328 PRK12403 putative aminotransfe 95.9 0.073 1.6E-06 53.8 11.1 170 128-304 100-311 (460)
329 PRK12566 glycine dehydrogenase 95.8 0.086 1.9E-06 57.8 11.8 151 129-304 127-292 (954)
330 KOG0258 Alanine aminotransfera 95.8 0.071 1.5E-06 53.1 10.1 133 125-259 112-256 (475)
331 PRK07482 hypothetical protein; 95.8 0.13 2.8E-06 52.1 12.4 90 209-303 206-308 (461)
332 PRK06541 hypothetical protein; 95.8 0.11 2.4E-06 52.6 11.8 89 210-304 208-310 (460)
333 PRK09792 4-aminobutyrate trans 95.6 0.59 1.3E-05 46.6 16.2 171 130-304 87-286 (421)
334 PLN02397 aspartate transaminas 95.6 0.2 4.3E-06 49.8 12.8 164 129-297 94-282 (423)
335 KOG0628 Aromatic-L-amino-acid/ 95.6 0.026 5.6E-07 57.0 6.4 116 184-301 195-319 (511)
336 PRK00615 glutamate-1-semialdeh 95.6 0.3 6.4E-06 49.2 14.0 167 128-304 95-288 (433)
337 PRK09221 beta alanine--pyruvat 95.5 0.14 2.9E-06 51.7 11.4 89 210-304 205-307 (445)
338 COG0160 GabT 4-aminobutyrate a 95.5 0.57 1.2E-05 47.6 15.8 170 130-304 103-310 (447)
339 KOG1357 Serine palmitoyltransf 95.5 0.05 1.1E-06 55.0 8.0 159 129-304 185-364 (519)
340 PRK07480 putative aminotransfe 95.5 0.21 4.6E-06 50.5 12.7 66 234-304 231-308 (456)
341 PRK05965 hypothetical protein; 95.4 0.29 6.3E-06 49.5 13.2 90 210-304 202-304 (459)
342 PRK08593 4-aminobutyrate amino 95.2 0.85 1.8E-05 45.9 16.0 172 125-304 84-295 (445)
343 PRK12389 glutamate-1-semialdeh 95.2 0.42 9.2E-06 47.7 13.8 161 129-304 96-287 (428)
344 PRK06082 4-aminobutyrate amino 95.2 0.45 9.7E-06 48.2 13.9 168 124-303 111-316 (459)
345 PLN00144 acetylornithine trans 95.1 0.41 8.9E-06 47.0 13.0 91 208-305 155-256 (382)
346 PRK07046 aminotransferase; Val 95.0 0.47 1E-05 48.0 13.5 159 127-305 116-305 (453)
347 KOG2040 Glycine dehydrogenase 95.0 0.14 3E-06 54.0 9.5 147 147-303 599-766 (1001)
348 PRK06943 adenosylmethionine--8 94.9 0.81 1.8E-05 46.3 14.6 90 209-304 208-311 (453)
349 TIGR00700 GABAtrnsam 4-aminobu 94.8 1.1 2.5E-05 44.4 15.4 172 129-304 79-285 (420)
350 PLN02482 glutamate-1-semialdeh 94.8 0.57 1.2E-05 47.8 13.5 89 208-305 232-334 (474)
351 PRK07483 hypothetical protein; 94.6 0.53 1.2E-05 47.4 12.6 90 210-304 186-289 (443)
352 PRK07481 hypothetical protein; 94.5 0.63 1.4E-05 46.9 12.9 76 225-304 214-302 (449)
353 PRK07030 adenosylmethionine--8 94.5 0.58 1.3E-05 47.5 12.7 90 209-304 201-304 (466)
354 PRK07036 hypothetical protein; 94.5 0.78 1.7E-05 46.6 13.4 76 225-304 221-310 (466)
355 KOG0634 Aromatic amino acid am 94.4 0.52 1.1E-05 47.6 11.6 110 147-260 126-246 (472)
356 KOG1359 Glycine C-acetyltransf 94.4 0.17 3.7E-06 49.0 7.9 137 130-288 116-266 (417)
357 PRK05639 4-aminobutyrate amino 94.2 1 2.2E-05 45.7 13.6 173 127-304 97-310 (457)
358 COG3977 Alanine-alpha-ketoisov 94.2 0.31 6.8E-06 47.4 9.3 201 89-304 38-268 (417)
359 COG0001 HemL Glutamate-1-semia 94.0 0.63 1.4E-05 47.0 11.4 183 106-309 75-292 (432)
360 PRK07986 adenosylmethionine--8 93.8 0.8 1.7E-05 46.0 11.8 171 125-303 85-293 (428)
361 PRK06917 hypothetical protein; 93.3 2.4 5.1E-05 42.8 14.3 175 123-304 71-289 (447)
362 PRK05630 adenosylmethionine--8 93.2 1.1 2.3E-05 44.9 11.7 68 234-304 213-290 (422)
363 TIGR03251 LAT_fam L-lysine 6-t 93.1 2.5 5.4E-05 42.3 14.0 72 210-284 206-289 (431)
364 PRK06918 4-aminobutyrate amino 93.1 3.1 6.7E-05 41.8 14.7 68 234-304 231-307 (451)
365 PRK04612 argD acetylornithine 92.8 2.8 6.1E-05 41.7 13.8 89 208-303 175-274 (408)
366 PRK08742 adenosylmethionine--8 92.7 1.4 3E-05 44.9 11.8 90 209-304 223-326 (472)
367 PRK06173 adenosylmethionine--8 92.6 1.1 2.4E-05 45.0 10.7 169 125-302 86-294 (429)
368 PRK06916 adenosylmethionine--8 92.4 1.1 2.5E-05 45.3 10.7 171 126-304 99-313 (460)
369 PRK06149 hypothetical protein; 92.4 2.8 6.2E-05 46.4 14.5 67 234-304 756-833 (972)
370 PRK08088 4-aminobutyrate amino 92.1 5.7 0.00012 39.5 15.1 92 209-304 184-287 (425)
371 TIGR00699 GABAtrns_euk 4-amino 91.3 4.9 0.00011 41.0 13.8 73 209-286 238-324 (464)
372 PLN02994 1-aminocyclopropane-1 91.1 0.43 9.4E-06 41.5 5.2 42 130-174 96-145 (153)
373 PF12897 Aminotran_MocR: Alani 90.4 0.72 1.6E-05 46.1 6.6 162 128-299 71-268 (425)
374 PRK06777 4-aminobutyrate amino 90.1 10 0.00023 37.7 14.8 171 130-304 87-286 (421)
375 PRK06209 glutamate-1-semialdeh 89.9 5.4 0.00012 39.9 12.6 88 208-304 173-270 (431)
376 PRK06938 diaminobutyrate--2-ox 89.6 15 0.00032 37.4 15.6 90 209-302 215-317 (464)
377 TIGR00709 dat 2,4-diaminobutyr 88.8 17 0.00036 36.6 15.1 71 227-301 210-291 (442)
378 PRK06148 hypothetical protein; 88.4 8.9 0.00019 42.9 13.9 66 234-304 796-873 (1013)
379 COG1448 TyrB Aspartate/tyrosin 87.9 3.4 7.3E-05 41.3 9.2 140 150-300 99-262 (396)
380 PRK06931 diaminobutyrate--2-ox 87.4 21 0.00046 36.1 15.0 64 234-301 237-310 (459)
381 KOG2040 Glycine dehydrogenase 87.4 3.5 7.5E-05 44.0 9.3 58 234-294 258-316 (1001)
382 KOG1401 Acetylornithine aminot 83.5 15 0.00033 37.1 11.4 171 128-310 100-300 (433)
383 TIGR00508 bioA adenosylmethion 81.8 17 0.00036 36.4 11.2 90 209-302 194-295 (427)
384 COG3033 TnaA Tryptophanase [Am 74.5 33 0.00072 34.5 10.4 183 109-302 65-284 (471)
385 KOG1402 Ornithine aminotransfe 72.4 11 0.00023 37.5 6.4 92 208-305 195-297 (427)
386 KOG1358 Serine palmitoyltransf 69.8 1.3E+02 0.0029 30.6 15.2 141 130-284 143-304 (467)
387 COG0161 BioA Adenosylmethionin 62.0 1.3E+02 0.0027 31.0 12.0 91 209-304 200-304 (449)
388 cd02067 B12-binding B12 bindin 58.2 74 0.0016 25.5 8.1 90 182-282 17-110 (119)
389 TIGR01501 MthylAspMutase methy 55.2 83 0.0018 26.8 8.1 87 181-277 18-113 (134)
390 cd02069 methionine_synthase_B1 50.2 1.7E+02 0.0038 26.5 9.9 92 181-283 105-203 (213)
391 cd00472 Ribosomal_L24e_L24 Rib 49.9 8.9 0.00019 27.8 1.1 23 276-302 4-26 (54)
392 PRK08297 L-lysine aminotransfe 48.6 42 0.00092 33.8 6.2 70 210-284 213-294 (443)
393 COG2075 RPL24A Ribosomal prote 47.3 14 0.00031 27.9 1.9 21 278-302 6-26 (66)
394 PLN02974 adenosylmethionine-8- 47.2 22 0.00048 39.0 4.1 68 234-305 597-675 (817)
395 cd02072 Glm_B12_BD B12 binding 43.4 1.7E+02 0.0036 24.8 8.1 88 181-278 16-112 (128)
396 PF01246 Ribosomal_L24e: Ribos 40.9 10 0.00023 29.0 0.3 24 275-302 3-26 (71)
397 PF02310 B12-binding: B12 bind 40.9 1.8E+02 0.0039 22.9 8.7 88 182-280 18-110 (121)
398 PRK02261 methylaspartate mutas 40.7 2.2E+02 0.0048 24.0 8.5 72 182-262 21-96 (137)
399 KOG1404 Alanine-glyoxylate ami 39.8 1.2E+02 0.0027 30.7 7.6 67 234-303 224-299 (442)
400 KOG0633 Histidinol phosphate a 39.7 3.5E+02 0.0076 26.4 10.3 111 140-259 83-199 (375)
401 cd02070 corrinoid_protein_B12- 38.8 2.8E+02 0.0061 24.6 10.1 89 181-282 99-192 (201)
402 PF00128 Alpha-amylase: Alpha 29.6 46 0.00099 30.2 2.7 27 234-260 47-74 (316)
403 COG2871 NqrF Na+-transporting 26.1 33 0.00073 33.5 1.2 32 29-60 310-343 (410)
404 PRK09441 cytoplasmic alpha-amy 25.5 56 0.0012 33.2 2.8 26 234-259 76-102 (479)
405 PF01282 Ribosomal_S24e: Ribos 24.9 88 0.0019 24.5 3.2 21 125-145 12-32 (84)
406 smart00642 Aamy Alpha-amylase 24.2 70 0.0015 27.9 2.8 26 234-259 65-91 (166)
407 KOG1467 Translation initiation 23.9 4.7E+02 0.01 27.4 8.8 123 121-258 335-468 (556)
408 PF10937 DUF2638: Protein of u 23.6 36 0.00078 28.3 0.8 19 24-42 89-108 (112)
409 PF15608 PELOTA_1: PELOTA RNA 22.9 4.3E+02 0.0092 21.6 7.0 63 130-200 23-88 (100)
410 PRK08335 translation initiatio 22.3 6.9E+02 0.015 23.9 11.4 115 124-256 88-216 (275)
411 TIGR02026 BchE magnesium-proto 21.5 4.1E+02 0.0088 27.2 8.1 88 185-281 29-122 (497)
412 TIGR00511 ribulose_e2b2 ribose 21.3 7.3E+02 0.016 23.8 11.1 113 126-256 96-222 (301)
413 PF13407 Peripla_BP_4: Peripla 20.7 3.6E+02 0.0077 23.7 6.7 65 184-256 20-85 (257)
414 TIGR02370 pyl_corrinoid methyl 20.2 6.2E+02 0.013 22.5 10.4 90 181-283 101-195 (197)
No 1
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-40 Score=319.97 Aligned_cols=182 Identities=20% Similarity=0.203 Sum_probs=160.0
Q ss_pred HHHHhcCCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc--CCCC---CCCEEE-EccCcC
Q 021539 109 LLDILSKKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES--YPFF---KGNYYL-TIISEE 180 (311)
Q Consensus 109 l~~~l~~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s--~~~~---~Gd~Il-s~~eh~ 180 (311)
+.+.+.|++|.+ |++++..+|+||++||+++|+++++ |+||||+||++|+++.+ +.+. +|++|+ |..||+
T Consensus 25 ~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~e--IiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~ 102 (386)
T COG1104 25 LTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEE--IIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHP 102 (386)
T ss_pred HHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCe--EEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccH
Confidence 344455665554 9999999999999999999998854 99999999999999988 4332 467764 888988
Q ss_pred --hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEE
Q 021539 181 --SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVL 255 (311)
Q Consensus 181 --~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vl 255 (311)
.+.++.+ ++.|++|+++|++. +|.|++++|+++|+++ |.||+++++ ++|++|||++|++ |+++|++||
T Consensus 103 aVl~~~~~L-e~~g~~Vtyl~V~~-~G~v~~e~L~~al~~~-----T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fH 175 (386)
T COG1104 103 AVLNTCRYL-ERQGFEVTYLPVDS-NGLVDLEQLEEALRPD-----TILVSIMHANNETGTIQPIAEIGEICKERGILFH 175 (386)
T ss_pred HHHHHHHHH-HhcCCeEEEeCCCC-CCeEcHHHHHHhcCCC-----ceEEEEEecccCeeecccHHHHHHHHHHcCCeEE
Confidence 4667777 67799999999997 8999999999999986 689999976 8999999999977 699999999
Q ss_pred ecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 256 LDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 256 vDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+||+|++ |++|+|+..+++|+++||+|| ++| |+|+|+||+|++.
T Consensus 176 vDAvQa~-Gkipi~~~~~~vD~ls~SaHK-~~G-pkGiGaLyv~~~~ 219 (386)
T COG1104 176 VDAVQAV-GKIPIDLEELGVDLLSFSAHK-FGG-PKGIGALYVRPGV 219 (386)
T ss_pred Eehhhhc-CceeccccccCcceEEeehhh-ccC-CCceEEEEECCCC
Confidence 9999999 999999999999999999999 988 9999999997754
No 2
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.9e-40 Score=322.43 Aligned_cols=180 Identities=19% Similarity=0.178 Sum_probs=162.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChHH--HHHHHHhCCcEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--FFKGNYYL-TIISEESDY--IKGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~V 195 (311)
+..+...++++|+.+|+|+|+++ ..+|+||+|+|+|+|+++.++. +.+||+|+ |..|||+|. |++++++.|++|
T Consensus 61 ~~~~t~~~e~aRe~va~~~~a~~-~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v 139 (405)
T COG0520 61 AEEATDLYEAAREAVARFLNADS-SDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV 139 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEE
Confidence 56677788999999999999986 2359999999999999999997 78899975 889999764 678888889999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
+++|++ ++|.++.+++++.++++ |+||+++++ .+|+++|+++|.+ ||++|++|+|||+|++ |+.|+|+++
T Consensus 140 ~~i~~~-~~g~~~~~~~~~~i~~~-----Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~-~h~~idv~~ 212 (405)
T COG0520 140 RVIPLD-DDGLLDLDALEKLITPK-----TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAA-GHLPIDVQE 212 (405)
T ss_pred EEEecC-CCCCcCHHHHHHhcCCC-----ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECcccc-CccCCCchh
Confidence 999998 58999999999988875 689999988 5999999999976 7999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST 309 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~ 309 (311)
+++||++||+|||++| |.|+|+||+|+++.+...|.
T Consensus 213 l~~Df~afsgHKwl~g-P~GiGvLy~r~~~l~~l~P~ 248 (405)
T COG0520 213 LGCDFLAFSGHKWLLG-PTGIGVLYVRKELLEELEPF 248 (405)
T ss_pred cCCCEEEEcccccccC-CCceEEEEEchHHHhhcCCc
Confidence 9999999999998888 99999999999999886664
No 3
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-37 Score=299.33 Aligned_cols=177 Identities=20% Similarity=0.189 Sum_probs=156.8
Q ss_pred hcCCCCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC----EEEEc-cCcC--hHHH
Q 021539 113 LSKKTSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN----YYLTI-ISEE--SDYI 184 (311)
Q Consensus 113 l~~~ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd----~Ils~-~eh~--~~~~ 184 (311)
+.|+.+. .|+++...+|+||+.||+++||++.+ |+||+|||||+|++++++.|..++ +|++. .||. ...+
T Consensus 71 ~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d--IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~ 148 (428)
T KOG1549|consen 71 LGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD--IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC 148 (428)
T ss_pred hcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc--EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH
Confidence 4567777 79999999999999999999999876 999999999999999999997776 77654 4555 3455
Q ss_pred HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccccc
Q 021539 185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGL 261 (311)
Q Consensus 185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQs 261 (311)
+.+ ++.|++|+++|++ .++.++.+.|+++++++ |+||+++++ ++|++||+++|.. |++.|++||+||||+
T Consensus 149 ~~l-~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~~-----T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQa 221 (428)
T KOG1549|consen 149 RAL-QEEGLEVTYLPVE-DSGLVDISKLREAIRSK-----TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQA 221 (428)
T ss_pred HHH-HhcCeEEEEeccC-ccccccHHHHHHhcCCC-----ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhh
Confidence 554 4568999999998 58899999999999986 689999987 6999999999975 799999999999999
Q ss_pred CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 262 VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 262 v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
+ |++++||+++++||+++|+|| ||| |+|+|+||+|++
T Consensus 222 v-G~i~vDV~eln~D~~s~s~HK-~yg-p~~iGaLYvr~~ 258 (428)
T KOG1549|consen 222 V-GKIPVDVQELNADFLSISAHK-IYG-PPGIGALYVRRK 258 (428)
T ss_pred c-CCccccHHHcCchheeeeccc-ccC-CCcceEEEEccC
Confidence 9 999999999999999999999 999 889999999983
No 4
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=3.8e-35 Score=310.46 Aligned_cols=239 Identities=18% Similarity=0.245 Sum_probs=180.3
Q ss_pred HHHHHHhhccCccCCcccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcc
Q 021539 41 VEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFK 120 (311)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~ 120 (311)
++.++..+||.+.+-+|.|++++++. ..+..+... +....+.++|+|+.. . .
T Consensus 21 ~~~~R~~~fp~l~~~iYLD~Aatt~~----~~~~V~~~~-~~~~~~~~~np~s~~---------~--------------~ 72 (805)
T PLN02724 21 IDELRATEFARLKGVVYLDHAGATLY----SESQLEAAL-ADFSSNVYGNPHSQS---------D--------------S 72 (805)
T ss_pred HHHHHHHHhhhcCCCEeEeCCCCCCC----CHHHHHHHH-HHHHhhccCCCCcCc---------c--------------h
Confidence 88888889999998899999988721 111121111 122345677777533 0 2
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH-HHHHHHHhCCcEEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD-YIKGFAAQKESKVIAA 198 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~-~~~~la~~~G~~V~~v 198 (311)
+..+...++++|++||+|||+++++|+||||+|+|+|+|+++++++|++|++|++. .||++. .++.+++++|++|+++
T Consensus 73 s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v 152 (805)
T PLN02724 73 SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV 152 (805)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec
Confidence 34456678999999999999987777899999999999999999999999998754 555532 4566778889999999
Q ss_pred eCCC-------CCcccCH--HHHHhhhhc----c-CCCCCceEEEEecc--cccchhcHHHHHHHHHC---------CcE
Q 021539 199 PETW-------LDLRIKG--SQLSQNFRR----K-CKYTPKGLFSYPVV--VNGTRYSMHWISEAHRN---------AWH 253 (311)
Q Consensus 199 p~~~-------~~g~id~--~~L~~~l~~----~-~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~---------g~~ 253 (311)
|++. ..+.++. ++|++.++. . ....+++||+++|+ ++|.++|+++|.++++. +++
T Consensus 153 ~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~ 232 (805)
T PLN02724 153 DIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWM 232 (805)
T ss_pred cchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceE
Confidence 8762 1334433 556655321 0 00123579999988 69999999998776542 478
Q ss_pred EEecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539 254 VLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST 309 (311)
Q Consensus 254 vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~ 309 (311)
|+|||+|++ |+.|+||+++++||++||+|| |||+|.|+|+||+|+++.+...|+
T Consensus 233 v~vDaaQ~~-g~~piDv~~~~~Dfl~~S~HK-~~GgP~G~G~L~vr~~~~~~l~p~ 286 (805)
T PLN02724 233 VLLDAAKGC-GTSPPDLSRYPADFVVVSFYK-IFGYPTGLGALLVRRDAAKLLKKK 286 (805)
T ss_pred EEeehhhhc-CCCCCChhhcCCCEEEEecce-eccCCCCceEEEEehhhhhhhcCC
Confidence 999999999 999999999999999999999 888899999999999887665553
No 5
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=1.1e-30 Score=251.24 Aligned_cols=178 Identities=21% Similarity=0.218 Sum_probs=153.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEE-EccCcChHH--HHHHHHhCCcEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYL-TIISEESDY--IKGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~V 195 (311)
+......++++|+.+|+++|++++ ++|+||+|+|+|+++++.++ ++++|++|+ +..||+++. |..+++++|++|
T Consensus 38 ~~~~~~~~~~~r~~la~~lg~~~~-~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v 116 (371)
T PF00266_consen 38 SREFAEILEEAREALAKLLGAPPD-EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV 116 (371)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSTT-EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhhHHHHHHHHHHHHhcCCccc-cccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 555677789999999999999862 47999999999999999998 467899985 778888665 677777889999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
.++|.+. ++.++.+++++.++++ +++|+++++ .+|+++|+++|.+ ||++|+++++||+|++ |..++|+++
T Consensus 117 ~~i~~~~-~~~~~~~~~~~~l~~~-----~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~-g~~~id~~~ 189 (371)
T PF00266_consen 117 RVIPADP-GGSLDLEDLEEALNPD-----TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSA-GCVPIDLDE 189 (371)
T ss_dssp EEEEEGT-TSSCSHHHHHHHHHTT-----ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTT-TTSS--TTT
T ss_pred ccccccc-cchhhhhhhhhhhccc-----cceEEeecccccccEEeeeceehhhhhccCCceeEechhcc-ccccccccc
Confidence 9999875 6789999999999864 689999998 5999999999975 7999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
+++||+++|+|| |+| |.|+|+||+|+++.+...|
T Consensus 190 ~~~D~~~~s~~K-l~g-p~G~g~l~v~~~~~~~~~p 223 (371)
T PF00266_consen 190 LGADFLVFSSHK-LGG-PPGLGFLYVRPEAIERLRP 223 (371)
T ss_dssp TTESEEEEESTS-TTS-SSTEEEEEEEHHHHHHHHT
T ss_pred cccceeeecccc-cCC-CCchhhheehhhhhhcccc
Confidence 999999999999 988 9999999999977665433
No 6
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=2.6e-29 Score=244.98 Aligned_cols=174 Identities=16% Similarity=0.187 Sum_probs=149.6
Q ss_pred hhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCc
Q 021539 121 GNFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKES 193 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~ 193 (311)
+..+...++++|+.+|+++|+. ++ +|+||+|+|+++|+++.++ .+++||+|+ +..+|+++ .+..+++..|+
T Consensus 62 ~~~~~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 139 (406)
T PRK09295 62 SAQATEKMENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGA 139 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCc
Confidence 4455667889999999999984 44 5999999999999999986 357899875 66777754 45666777899
Q ss_pred EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539 194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL 270 (311)
Q Consensus 194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl 270 (311)
+++.+|.+. ++.++.++|+++++++ ++||++++. .||+++|+++|.+ ||++|+++++|++|++ |+.++|+
T Consensus 140 ~v~~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~-g~~~~~~ 212 (406)
T PRK09295 140 ELRVIPLNP-DGTLQLETLPALFDER-----TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAV-MHHPVDV 212 (406)
T ss_pred EEEEEecCC-CCCCCHHHHHHhcCCC-----cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEccccc-CccccCc
Confidence 999999875 6789999999998764 579988876 5999999999965 7999999999999999 9999999
Q ss_pred CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
..+++||+++|+|| ++| |.|+|+||+++++.+.
T Consensus 213 ~~~~~D~~~~s~~K-~~g-p~G~G~l~~~~~~~~~ 245 (406)
T PRK09295 213 QALDCDFYVFSGHK-LYG-PTGIGILYVKEALLQE 245 (406)
T ss_pred hhcCCCEEEeehhh-ccC-CCCcEEEEEchHhHhh
Confidence 99999999999999 999 9999999999987654
No 7
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=2.8e-28 Score=236.82 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=172.9
Q ss_pred HHhhccCccC-CcccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcchhh
Q 021539 45 VFAKYPQYYN-GIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNF 123 (311)
Q Consensus 45 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~G~~ 123 (311)
+.+.||-+.. .+|.|++++++ ..++......+. ....+++++... ...+..
T Consensus 9 ~r~~fp~l~~~~~yld~a~~~~-----~~~~v~~a~~~~-~~~~~~~~~~~~----------------------~~~~~~ 60 (401)
T PRK10874 9 FRAQFPALQDAGVYLDSAATAL-----KPQAVIEATQQF-YSLSAGNVHRSQ----------------------FAAAQR 60 (401)
T ss_pred HHHhCCCcCCceEEEeCCcccC-----CCHHHHHHHHHH-HHhccCCCCCcc----------------------cHHHHH
Confidence 4578887653 68999988771 111121111122 123445544321 002445
Q ss_pred hhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCcEEE
Q 021539 124 ISIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKESKVI 196 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~ 196 (311)
....++++|+.+|+++|+ +++ +|+||+|+|+++++++.++ .+++|++|+ +..+|+++ .+..+++..|++++
T Consensus 61 ~~~~~~~~r~~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 138 (401)
T PRK10874 61 LTARYEAAREQVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVV 138 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEE
Confidence 566788999999999999 444 4999999999999999998 467899886 66777754 35666777899999
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l 273 (311)
.+|.+. ++.++.+++++.++++ ++||++++. .||.++|+++|.+ ||++|+++++|++|++ |+.++|+..+
T Consensus 139 ~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~-g~~~~~~~~~ 211 (401)
T PRK10874 139 KLPLGA-DRLPDVDLLPELITPR-----TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGA-VHFPADVQAL 211 (401)
T ss_pred EEecCC-CCcCCHHHHHHhcCcC-----cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccc-ccccCCchhc
Confidence 999875 6788999999999765 578888766 6999999999966 6999999999999999 9999999999
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
++||+++|+|| +|| |.|+|+||++++..+..
T Consensus 212 ~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~ 242 (401)
T PRK10874 212 DIDFYAFSGHK-LYG-PTGIGVLYGKSELLEAM 242 (401)
T ss_pred CCCEEEEeccc-ccC-CCccEEEEEchHHHhcC
Confidence 99999999999 999 99999999998876653
No 8
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=3.4e-28 Score=233.87 Aligned_cols=177 Identities=19% Similarity=0.111 Sum_probs=147.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcCh--HHHHHHHHhCCcE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEES--DYIKGFAAQKESK 194 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~ 194 (311)
+......++++|+.+++++|+++++ |+||+|+|+|+|+++.++ .+++|++|+ +..+|++ ..+..+. ..|++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~--v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~ 114 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPKE--IIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFE 114 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCE
Confidence 3445666889999999999998654 999999999999887654 135788876 5667764 3444443 56999
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA 271 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~ 271 (311)
++.+|+++ ++.++.++|+++++++ ++||++++. .||.++|+++|.+ ||++|++++||++|++ |+.++|++
T Consensus 115 v~~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~-g~~~~~~~ 187 (364)
T PLN02651 115 VTYLPVKS-DGLVDLDELAAAIRPD-----TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAV-GKIPVDVD 187 (364)
T ss_pred EEEEccCC-CCcCCHHHHHHhcCCC-----cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhh-CCcccCcc
Confidence 99999875 6889999999999765 579988866 6999999999966 6999999999999999 99999999
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST 309 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~ 309 (311)
++++||+++|+|| |+| |.|+|+||+|++..+...|.
T Consensus 188 ~~~~D~~~~s~hK-~~g-p~G~g~l~v~~~~~~~l~p~ 223 (364)
T PLN02651 188 DLGVDLMSISGHK-IYG-PKGVGALYVRRRPRVRLEPL 223 (364)
T ss_pred cCCCCEEEechhh-hCC-CCceEEEEEcCCCCCCCCcc
Confidence 9999999999999 777 99999999999877664543
No 9
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=1.1e-27 Score=232.30 Aligned_cols=175 Identities=15% Similarity=0.146 Sum_probs=149.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCc
Q 021539 121 GNFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKES 193 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~ 193 (311)
+......++++|+.+|+++|++ ++ +|+||+|+|+++++++.++ .+++|++|+ +..+|+++ .+..+++..|+
T Consensus 55 ~~~~~~~~~~~r~~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~ 132 (398)
T TIGR03392 55 AQSLTARYELARQQVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGA 132 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence 3445667889999999999995 44 5999999999999999998 367899886 56677754 35556777899
Q ss_pred EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539 194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL 270 (311)
Q Consensus 194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl 270 (311)
+++.+|.+. ++.++.++|+++++++ +++|++++. .||.++|+++|.+ ||++|+++++|++|++ |+.++|+
T Consensus 133 ~v~~v~~~~-~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-~~~~~~~ 205 (398)
T TIGR03392 133 KVVKLPIGA-DLLPDIRQLPELLTPR-----TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGV-VHGPPDV 205 (398)
T ss_pred EEEEEecCC-CCCcCHHHHHHHhccC-----ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhc-CCCCCCh
Confidence 999999875 5778999999999765 578888765 6999999999966 6999999999999999 9999999
Q ss_pred CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539 271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
..+++||+++|+|| ++| |.|+|+||++++..+..
T Consensus 206 ~~~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~ 239 (398)
T TIGR03392 206 QALDIDFYAFSGHK-LYG-PTGIGVLYGKTELLEAM 239 (398)
T ss_pred hhcCCCEEEEeccc-ccC-CCceEEEEEcHHHHhhC
Confidence 98999999999999 999 99999999998876543
No 10
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=7.4e-27 Score=229.14 Aligned_cols=177 Identities=18% Similarity=0.148 Sum_probs=149.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKESKV 195 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V 195 (311)
......++++|+.+|+++|+++ .++|+||+|+|++++++++++ .+++|+.|+ +..+|++. .++.+++..|+++
T Consensus 72 ~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 72 AKATDAYELARKKVAAFINAST-SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3344567899999999999963 235999999999999999876 357889886 55677744 3566677789999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
+.+|++. ++.++.++|++.++++ ++||++++. .||+++|+++|.+ ||++|+++++|++|++ |+.++|+.+
T Consensus 151 ~~v~~~~-~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~-g~~~~~~~~ 223 (424)
T PLN02855 151 KFVGLTP-DEVLDVEQLKELLSEK-----TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSV-PHMPVDVQT 223 (424)
T ss_pred EEEecCC-CCCcCHHHHHHHhccC-----ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhc-CCcCCCchh
Confidence 9999875 4568999999999764 689998876 5999999999966 6999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
+++||+++|+|| ++| |.|+|+||++++..+...|
T Consensus 224 ~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~~p 257 (424)
T PLN02855 224 LGADFLVASSHK-MCG-PTGIGFLWGKSDLLESMPP 257 (424)
T ss_pred cCCCEEEeeccc-ccC-CCccEEEEEchhhhhcCCC
Confidence 999999999999 898 9999999999988765433
No 11
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=2.3e-26 Score=223.03 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=146.8
Q ss_pred hhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChHH--HHHHHHhCCcE
Q 021539 122 NFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESDY--IKGFAAQKESK 194 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~ 194 (311)
......++++|+.+|+++|++ ++ +|+||+|+|+++++++.++. +.+|+.|+ +..+|++.. ++.+++..|++
T Consensus 58 ~~~~~~~~~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 58 VRATEAYEAVREKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 334456789999999999997 34 59999999999999998763 46789886 566777543 45566677999
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA 271 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~ 271 (311)
++.+|.+. ++.++.++|++.++++ +++|++++. .+|+++|+++|.+ ||++|+++++|++|++ |+.++|+.
T Consensus 136 ~~~v~~~~-~~~~~~~~l~~~i~~~-----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-g~~~~~~~ 208 (403)
T TIGR01979 136 LKFIPLDD-DGTLDLDDLEKLLTEK-----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAV-PHMPVDVQ 208 (403)
T ss_pred EEEEecCC-CCCCCHHHHHHHhccC-----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhc-CccccCcc
Confidence 99999885 7889999999998764 578888876 5999999999966 7999999999999999 99999999
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
.+++||+++|+|| ++| |.|+|+|+++++..+.
T Consensus 209 ~~~~d~~~~s~~K-~~g-p~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 209 ALDCDFYVFSGHK-MYG-PTGIGVLYGKEELLEQ 240 (403)
T ss_pred ccCCCEEEEeccc-ccC-CCCceEEEEchHHHhc
Confidence 9999999999999 888 9999999999886554
No 12
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=3.3e-26 Score=220.50 Aligned_cols=169 Identities=19% Similarity=0.164 Sum_probs=142.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChH--HHHHHHHhCCcEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--FFKGNYYL-TIISEESD--YIKGFAAQKESKVI 196 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~ 196 (311)
......++++|+.+++++|+++++ |+||+|+|+|+++++.++. +.+|+.|+ +..+|++. .+.. .++.|++++
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~--i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~-~~~~G~~v~ 114 (379)
T TIGR03402 38 GEVGKAVEEAREQVAKLLGAEPDE--IIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQH-LEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHH-HHHcCCEEE
Confidence 445666889999999999998654 9999999999999888652 24567775 56677743 2333 345799999
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l 273 (311)
.+|.++ ++.++.+++++.++++ +++|++++. .+|+++|+++|.+ ||++|+++++|++|++ |+.++|+.++
T Consensus 115 ~v~~~~-~g~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~-g~~~~~~~~~ 187 (379)
T TIGR03402 115 YLPVDE-EGRLDLEELRAAITDD-----TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAV-GKIPIDLKEM 187 (379)
T ss_pred EEccCC-CCcCCHHHHHHhcCCC-----cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccc-cccccCcccC
Confidence 999875 6789999999999764 578888765 6999999999966 6999999999999999 9999999999
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++||+++|+|| ++| |.|+|+||++++.
T Consensus 188 ~~D~~~~s~~K-~~g-p~G~g~l~v~~~~ 214 (379)
T TIGR03402 188 NIDMLSLSGHK-LHG-PKGVGALYIRKGT 214 (379)
T ss_pred CCCEEEEcHHH-cCC-CCceEEEEECCCC
Confidence 99999999999 998 9999999999875
No 13
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=4.7e-26 Score=219.85 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=141.0
Q ss_pred hhhhhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcCCC----CC-CCEEE-EccCcChHH-HHHHHHhCC
Q 021539 121 GNFISIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESYPF----FK-GNYYL-TIISEESDY-IKGFAAQKE 192 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~~~----~~-Gd~Il-s~~eh~~~~-~~~la~~~G 192 (311)
+......++++|+++++.+|+ +++ +|+||+|+||+++++++++.+ ++ +++|+ +..+|++.. ....++..|
T Consensus 37 ~~~~~~~l~~a~~~~~~~~~~~~~~--~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G 114 (382)
T TIGR03403 37 GTATHPAIAEALDKLYKGINARDLD--DIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLG 114 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCC
Confidence 344556678999999999998 444 599999999999999988632 34 45665 667777432 222345679
Q ss_pred cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC
Q 021539 193 SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA 269 (311)
Q Consensus 193 ~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld 269 (311)
++++.+|++. ++.++.++|++.++++ +++|++++. .||+++|+++|.+ +|++|+++++|++|++ |+.++|
T Consensus 115 ~~v~~v~~~~-~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~-g~~~~~ 187 (382)
T TIGR03403 115 VEVTYLPINE-QGTITAEQVREAITEK-----TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAI-GKIPVD 187 (382)
T ss_pred CEEEEEecCC-CCCCCHHHHHHhcccC-----CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhc-CCCccC
Confidence 9999999975 6788999999998764 578888755 6999999999966 6999999999999999 999999
Q ss_pred CCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+.++++||+++|+|| |+| |.|+|+||+|++.
T Consensus 188 ~~~~~~D~~~~s~~K-~~g-p~G~g~l~vr~~~ 218 (382)
T TIGR03403 188 VQKAGVDFLSFSAHK-FHG-PKGVGGLYIRKGV 218 (382)
T ss_pred ccccCCCEEEEcchh-hCC-CCceEEEEECCCC
Confidence 999999999999999 888 9999999999875
No 14
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=7.1e-26 Score=216.95 Aligned_cols=190 Identities=12% Similarity=-0.003 Sum_probs=149.3
Q ss_pred hHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE-EEEccCcChHHHHH
Q 021539 108 RLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY-YLTIISEESDYIKG 186 (311)
Q Consensus 108 ~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~-Ils~~eh~~~~~~~ 186 (311)
++.+.+..+....+......++++|+.+++++|+++++..|+||+|+|+|++.++.++. .+|+. ++.....+...+..
T Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~~~~ 95 (363)
T TIGR02326 17 TVKEAMLFDWCTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGARIVQ 95 (363)
T ss_pred HHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHHHHH
Confidence 35555544443345556667889999999999997543469999999999999999985 45555 44333323222345
Q ss_pred HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539 187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF 263 (311)
Q Consensus 187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~ 263 (311)
++++.|++++.+|.++ ++.++.++++++++.++ .+++|++++. .||+++|+++|.+ ||++|+++++|++|++
T Consensus 96 ~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~- 170 (363)
T TIGR02326 96 IAEYLGIPHHVVDTGE-VEPPDVVEVEAILAADP---AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSF- 170 (363)
T ss_pred HHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhCC---CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccc-
Confidence 5677899999999875 67889999999987532 2457777766 5999999999966 6999999999999999
Q ss_pred cCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 264 GEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 264 G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|..|+|+.++++||+++|+|||++| |.|+|+|+++++..+
T Consensus 171 g~~~~~~~~~~~D~~~~s~~K~l~~-p~G~G~l~~~~~~~~ 210 (363)
T TIGR02326 171 GGIPIDIAELHIDYLISSANKCIQG-VPGFGFVIARQAELA 210 (363)
T ss_pred cCcccchhhcCccEEEecCcccccc-CCcceEEEECHHHHH
Confidence 9999999999999999999996666 999999999987654
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=1.5e-25 Score=218.65 Aligned_cols=175 Identities=19% Similarity=0.126 Sum_probs=145.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESKV 195 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V 195 (311)
......++++|+.+|+++|+++++ |+||+|+|+++++++.++. +.+|+.|+ +..+|++. .++. ++..|+++
T Consensus 43 ~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~-~~~~g~~v 119 (402)
T TIGR02006 43 WEAEEAVENARNQVAELIGADSRE--IVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRY-LEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHH-HHhcCCEE
Confidence 344566789999999999997655 9999999999999887653 35788876 55676643 3333 34569999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
..+|.++ ++.++.++|++.++++ +++|++++. .+|.++|+++|.+ ||++|+++++|++|++ |+.++|+.+
T Consensus 120 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~-g~~~~~~~~ 192 (402)
T TIGR02006 120 TYLPPKS-NGLIDLEELKAAIRDD-----TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSV-GKIPINVNE 192 (402)
T ss_pred EEEccCC-CCcCCHHHHHHhcCCC-----CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhc-CCcccCccc
Confidence 9999875 7889999999998754 578888766 5999999999966 6999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
+++||+++|+|| ++| |.|+|+||++++......|
T Consensus 193 ~~~D~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~~~ 226 (402)
T TIGR02006 193 LKVDLMSISGHK-IYG-PKGIGALYVRRKPRVRLEA 226 (402)
T ss_pred cCCCEEEEehhh-hcC-CCceEEEEEccCCCCCCCc
Confidence 999999999999 888 9999999999876554333
No 16
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=1.6e-25 Score=218.82 Aligned_cols=169 Identities=17% Similarity=0.129 Sum_probs=130.9
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC---CEEE-EccCcChH--HHHHHHHhCCcEE----EEEe
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG---NYYL-TIISEESD--YIKGFAAQKESKV----IAAP 199 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G---d~Il-s~~eh~~~--~~~~la~~~G~~V----~~vp 199 (311)
+.++++ +++|+++++ |+||+|+|+++|+++.++ +.++ +.|+ +..+|.++ .+...+++.|+++ +.++
T Consensus 74 ~~~~~~-~l~g~~~~~--v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~ 149 (406)
T TIGR01814 74 ESLLKL-RLVGAKEDE--VVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIE 149 (406)
T ss_pred hhhccc-cccCCCCCc--EEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEec
Confidence 444445 899998765 999999999999999987 4443 3565 44677753 3444556678887 4566
Q ss_pred CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539 200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPD 276 (311)
Q Consensus 200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~D 276 (311)
.++ ++.++.+++++.++... .++++|+++++ .+|.++|+++|.+ ||++|++++||++|++ |+.|+|+.++++|
T Consensus 150 ~~~-~g~~~~~~l~~~~~~~~--~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~-G~~~id~~~~gvD 225 (406)
T TIGR01814 150 PRE-EETLRLEDILDTIEKNG--DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAV-GNVPLDLHDWGVD 225 (406)
T ss_pred cCC-CCccCHHHHHHHHHhcC--CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEccccc-CCcccccccCCCC
Confidence 654 57789999988885321 13789999887 5999999999966 7999999999999999 9999999999999
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
|+++|+|||++| |.| |+||++++..+...|
T Consensus 226 ~~~~s~hK~l~g-~pG-~~l~v~~~~~~~~~p 255 (406)
T TIGR01814 226 FACWCTYKYLNA-GPG-AGAFVHEKHAHTERP 255 (406)
T ss_pred EEEEcCccccCC-CCC-eEEEEehhhhhhcCC
Confidence 999999997666 559 888887765433334
No 17
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.93 E-value=6.9e-26 Score=220.37 Aligned_cols=172 Identities=12% Similarity=-0.030 Sum_probs=136.8
Q ss_pred cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCC-CCEEEEccCcChHHHHHHHHhCCc-EE
Q 021539 119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFK-GNYYLTIISEESDYIKGFAAQKES-KV 195 (311)
Q Consensus 119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~-Gd~Ils~~eh~~~~~~~la~~~G~-~V 195 (311)
+.+......++++|+.+++++|++ ++++|+|++ |+|+++|.++.++ +.+ ++.+++..+|..+....++++.|+ ++
T Consensus 41 hr~~~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 41 HRQKPVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSL-LGARRVDHLAWESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhc-CCCCcceEEEeCHHHHHHHHHHHhhcCCCCc
Confidence 445566778899999999999995 455799985 9999999999998 553 556666555545433334566788 99
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l 273 (311)
+.++.++ ++.+++++++ . +++|+++|+ .||+++|+++|.+ |++|++++|||+|++ |+.|+|+++
T Consensus 119 ~~~~~~~-g~~~d~~~i~----~------~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVDa~qs~-G~~pidv~~- 184 (378)
T PRK03080 119 RVLEADY-GSLPDLSAVD----F------DRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICDATSAA-FALPLDWSK- 184 (378)
T ss_pred eEeccCC-CCCCCHhhcC----C------CCCEEEEecCCccceeccchhhcc-ccCCCeEEEeccccc-ccCCCCHHH-
Confidence 9998875 5667766532 2 246888887 5899999999977 889999999999999 999999986
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
+||+++|+|| |+|+|.|+|+||++++.++...|
T Consensus 185 -iD~~~~s~~K-~l~~P~G~g~l~v~~~~~~~~~p 217 (378)
T PRK03080 185 -LDVYTFSWQK-VLGGEGGHGMAILSPRAVERLES 217 (378)
T ss_pred -CcEEEEehhh-hCCCCCceEEEEECHHHHHhhhc
Confidence 7999999999 55559999999999988765444
No 18
>PRK02769 histidine decarboxylase; Provisional
Probab=99.93 E-value=4.9e-25 Score=215.76 Aligned_cols=183 Identities=12% Similarity=-0.046 Sum_probs=142.6
Q ss_pred CCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEE-EccCcChHHHHHHHHh
Q 021539 115 KKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYL-TIISEESDYIKGFAAQ 190 (311)
Q Consensus 115 ~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Il-s~~eh~~~~~~~la~~ 190 (311)
++++.+ |..++..++++|+.+|+++|+++++.-.+||+|+|||+++.+.. ..+.++++|+ |..+|++. ...++.
T Consensus 52 np~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv--~ka~~~ 129 (380)
T PRK02769 52 DPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSV--SKIARL 129 (380)
T ss_pred CccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehH--HHHHHH
Confidence 344444 56677888899999999999986553348999999997765432 2234566765 66777752 233444
Q ss_pred CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC---cEEEecccccCcc
Q 021539 191 KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA---WHVLLDATGLVFG 264 (311)
Q Consensus 191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g---~~vlvDAaQsv~G 264 (311)
.|.++..+|.+. +|++|.++|+++++++ ...+.+|++++. ++|.+.|+++|.+ ++++| +++||||+|+. |
T Consensus 130 lg~~~~~V~~~~-~g~id~~~L~~~i~~~--~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg-~ 205 (380)
T PRK02769 130 LRIKSRVITSLP-NGEIDYDDLISKIKEN--KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSG-M 205 (380)
T ss_pred cCCCCceeccCC-CCcCcHHHHHHHHHhC--CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccc-e
Confidence 577777888874 7899999999999865 123678888766 6999999999976 68888 69999999999 9
Q ss_pred Ccc-------cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 265 EDQ-------LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 265 ~~p-------ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
..| +|+.. ++|++++|+|| |+|.|.|+|+||+|++..+.
T Consensus 206 ~~p~~~~~~~~d~~~-~vDsis~s~HK-~~~~P~g~G~l~~r~~~~~~ 251 (380)
T PRK02769 206 ILPFVNNPPPFSFAD-GIDSIAISGHK-FIGSPMPCGIVLAKKKYVER 251 (380)
T ss_pred eecccCccccCCccC-CCCEEEECCcc-cCCCCCCcEEEEEehhhhhh
Confidence 995 88877 99999999999 76669999999999977654
No 19
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.1e-24 Score=209.99 Aligned_cols=171 Identities=13% Similarity=0.017 Sum_probs=142.6
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChHH-HHHHHHhCCcEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESDY-IKGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~~-~~~la~~~G~~V 195 (311)
|......++++|+.+|+++|+++++ |+||+|+|+++++++.++. ..+|+.|+ +..+|++.. ....++..|+++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~--i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v 115 (381)
T PRK02948 38 GGTASSLLQVCRKTFAEMIGGEEQG--IYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEE
Confidence 4555667899999999999997654 9999999999998877652 24678876 566777432 223456679999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
..+|.++ ++.++.++|++.++++ +++|++++. .||+++|+++|.+ |+++|+++++|++|++ |+.++|+.+
T Consensus 116 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~-g~~~~~~~~ 188 (381)
T PRK02948 116 TEIPVDK-SGLIRLVDLERAITPD-----TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTF-GKLPIDVFE 188 (381)
T ss_pred EEEeeCC-CCCCCHHHHHHhcCCC-----CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhc-cccccCccc
Confidence 9999875 6789999999988754 578888765 5999999999966 6999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+++|++++|+|| +|| |.|+|++|++++.
T Consensus 189 ~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~ 216 (381)
T PRK02948 189 MGIDSLSVSAHK-IYG-PKGVGAVYINPQV 216 (381)
T ss_pred CCCCEEEecHHh-cCC-CCcEEEEEEcCCC
Confidence 999999999999 899 9999999999875
No 20
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=8.3e-25 Score=214.18 Aligned_cols=193 Identities=10% Similarity=0.050 Sum_probs=155.0
Q ss_pred hhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH
Q 021539 107 SRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI 184 (311)
Q Consensus 107 ~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~ 184 (311)
.++.+.+... ..+.........+++|+.+++++|++++ +.++||+++|++++.++.++ +++||+|+ +..+|.+..|
T Consensus 22 ~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~gt~a~~~a~~~~-~~~Gd~Vlv~~~~~~~~~~ 99 (401)
T PLN02409 22 ERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSG-TPFIFPTTGTGAWESALTNT-LSPGDKVVSFRIGQFSLLW 99 (401)
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHhc-CCCCCEEEEeCCCchhHHH
Confidence 3455555333 3344555566788999999999999753 47999999999999888776 67999986 5567777767
Q ss_pred HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHH-H--HHHCCcEEEeccc
Q 021539 185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWIS-E--AHRNAWHVLLDAT 259 (311)
Q Consensus 185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~-~--a~~~g~~vlvDAa 259 (311)
..++++.|++++.++.++ +..++.++|++++++.+. ..+++|+++++ .||.++|+++|. . +|++|+++++|++
T Consensus 100 ~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~l~~~~~-~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v 177 (401)
T PLN02409 100 IDQMQRLNFDVDVVESPW-GQGADLDILKSKLRQDTN-HKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGV 177 (401)
T ss_pred HHHHHHcCCceEEEECCC-CCCCCHHHHHHHHhhCcC-CCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcc
Confidence 677788899999999876 445789999999986210 12678888877 599999999994 5 7889999999999
Q ss_pred ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
|++ |..++|+.++++||+++|+|||++| |.|+|+|+++++..+.
T Consensus 178 ~s~-g~~~id~~~~~~D~~~~s~~K~l~~-P~G~G~l~~~~~~~~~ 221 (401)
T PLN02409 178 SSI-GALDFRMDEWGVDVALTGSQKALSL-PTGLGIVCASPKALEA 221 (401)
T ss_pred ccc-CCccccccccCccEEEEcCccccCc-CCCcceeEECHHHHHH
Confidence 999 9999999999999999999995555 9999999999877543
No 21
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.1e-24 Score=208.03 Aligned_cols=171 Identities=22% Similarity=0.239 Sum_probs=142.0
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCC-CEEE-EccCcChH--HHHHHHHhCCc
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKG-NYYL-TIISEESD--YIKGFAAQKES 193 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~G-d~Il-s~~eh~~~--~~~~la~~~G~ 193 (311)
+......++++|+.+|+++|+++++ |+||+|+|+|+++++.++. +.+| +.|+ +..+|++. .++. ++..|+
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~-~~~~G~ 113 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTEE--VIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRA-LERNGF 113 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHH-HHhcCC
Confidence 3445566789999999999998665 9999999999999888763 2355 6665 55666643 3433 345699
Q ss_pred EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539 194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL 270 (311)
Q Consensus 194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl 270 (311)
+++.+|.++ ++.++.++|++.++++ +++|++++. .+|.++|+++|.+ +|++|+++++|++|++ |..++|+
T Consensus 114 ~v~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~-g~~~~~~ 186 (353)
T TIGR03235 114 TVTYLPVDE-SGRIDVDELADAIRPD-----TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVV-GKITVDL 186 (353)
T ss_pred EEEEEccCC-CCcCCHHHHHHhCCCC-----CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhc-CCccccc
Confidence 999999875 6789999999998754 578888766 5999999999966 6999999999999999 9999999
Q ss_pred CCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
++.++||+++|+|| ++| |.|+|+||++++..
T Consensus 187 ~~~~~D~~~~s~~K-~~g-p~g~g~l~~~~~~~ 217 (353)
T TIGR03235 187 SADRIDLISCSGHK-IYG-PKGIGALVIRKRGK 217 (353)
T ss_pred cccCCCEEEeehhh-cCC-CCceEEEEEccCcc
Confidence 99999999999999 788 99999999999864
No 22
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.4e-24 Score=211.78 Aligned_cols=169 Identities=20% Similarity=0.137 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEE
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~v 198 (311)
...++++|+.+|+++|+++++ |+||+|+|+|+++++.++. +.+|+.|+ +..+|++. .++.+ +..|+++..+
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~--v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v 124 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPRE--IVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEE
Confidence 455789999999999997654 9999999999999887653 46789886 56777643 34433 4569999999
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+. ++.++.++|+++++++ +++|++++. .+|.++|+++|.+ ||++|+++++|++|++ |..++|+...++
T Consensus 125 ~~~~-~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~-g~~~~~~~~~~~ 197 (404)
T PRK14012 125 DPQS-NGIIDLEKLEAAMRDD-----TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSV-GKVPIDLSKLKV 197 (404)
T ss_pred ccCC-CCcCCHHHHHHhcCCC-----CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhc-CCcccCcccCCC
Confidence 9885 7889999999999764 578888766 5999999999966 6999999999999999 999999999999
Q ss_pred cEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
||+++|+|| ++| |.|+|+||++++....
T Consensus 198 D~~~~s~~K-~~g-p~g~G~l~~~~~~~~~ 225 (404)
T PRK14012 198 DLMSFSAHK-IYG-PKGIGALYVRRKPRVR 225 (404)
T ss_pred CEEEEehhh-ccC-CCceEEEEEecCCCCC
Confidence 999999999 998 9999999999876543
No 23
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.92 E-value=6.5e-25 Score=218.20 Aligned_cols=174 Identities=11% Similarity=0.016 Sum_probs=135.9
Q ss_pred CCCCcchhhhhHHHHHHHHHHHHHcCCC-C-CCCeEEE--eCCHHHHHHHHHhcCCC-------CCC-----CEEE-Ecc
Q 021539 115 KKTSFKGNFISIPEIQARNRALKHCGLS-E-DEYLVLF--VPNYKEAMLMIGESYPF-------FKG-----NYYL-TII 177 (311)
Q Consensus 115 ~~ss~~G~~~~~~le~aR~~IA~~Lga~-~-dey~VvF--TsnaTealnlv~~s~~~-------~~G-----d~Il-s~~ 177 (311)
|++++ |..+ ..++++|+.+|++||++ + ++ ++| |+|+|||+|+++.+... ..| .+|+ |..
T Consensus 71 np~s~-~~~~-~le~~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~ 146 (431)
T TIGR01788 71 DKDEY-PQTA-EIENRCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSN 146 (431)
T ss_pred CcccC-ccHH-HHHHHHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCc
Confidence 33443 4444 78899999999999997 3 34 776 79999999987654311 111 2454 566
Q ss_pred CcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC----
Q 021539 178 SEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN---- 250 (311)
Q Consensus 178 eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~---- 250 (311)
+|.+ |...++..|++++.+|++..++++|+++|+++++++ +.||++++. ++|+++||++|+. |+++
T Consensus 147 ~H~s--v~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-----t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~ 219 (431)
T TIGR01788 147 VQVC--WEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDEN-----TIGVVCILGTTYTGEYEDVKALNDALDEYNAKT 219 (431)
T ss_pred chHH--HHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhC-----CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhh
Confidence 6543 444556679999999998633589999999999875 578888876 7999999999976 6888
Q ss_pred --CcEEEeccccc-------CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 251 --AWHVLLDATGL-------VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 251 --g~~vlvDAaQs-------v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
|+++||||+|+ + ++.++|+...++|++++|+|||.+| |+|+|+||+|++
T Consensus 220 ~~~~~~HvDaaq~g~~~p~~~-~~~~~~~~~~~~DSis~s~HK~~~~-P~g~G~l~~r~~ 277 (431)
T TIGR01788 220 GWDIPIHVDAASGGFIAPFVY-PDLEWDFRLPRVKSINVSGHKYGLV-YPGVGWVIWRDE 277 (431)
T ss_pred CCCceEEEecccHHHHHHHhC-CCchhhcCCCCceEEEECchhccCC-CCCcEEEEEeCh
Confidence 89999999999 6 8888888878899999999994447 999999999986
No 24
>PLN03032 serine decarboxylase; Provisional
Probab=99.92 E-value=1.8e-24 Score=211.61 Aligned_cols=183 Identities=13% Similarity=0.020 Sum_probs=142.0
Q ss_pred cCCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEE-EEccCcChHHHHHHHH
Q 021539 114 SKKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYY-LTIISEESDYIKGFAA 189 (311)
Q Consensus 114 ~~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~I-ls~~eh~~~~~~~la~ 189 (311)
.|+++++ |..++..++++|+.+|+++|+++++..-+||+|+|||+++.+.+.. ..++..+ ++..+|++. ...++
T Consensus 52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv--~kaa~ 129 (374)
T PLN03032 52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAAR 129 (374)
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHH--HHHHH
Confidence 3455544 7788899999999999999998776334999999999988665421 1233455 467777642 23345
Q ss_pred hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC-----cEEEeccccc
Q 021539 190 QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA-----WHVLLDATGL 261 (311)
Q Consensus 190 ~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g-----~~vlvDAaQs 261 (311)
..|.++..||++. +|++|+++|++.++++.. .+.+|++++. ++|+++||++|++ ++++| +++||||||+
T Consensus 130 ~lg~~~~~V~~d~-~g~id~~~L~~~i~~~~~--~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~g 206 (374)
T PLN03032 130 MYRMEAVKVPTLP-SGEIDYDDLERALAKNRD--KPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALF 206 (374)
T ss_pred HcCCCCeEeeeCC-CCcCcHHHHHHHHHHcCC--CCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccch
Confidence 5577888899986 899999999999986421 2567777755 6999999999977 58876 5899999999
Q ss_pred CccCccc-------CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 262 VFGEDQL-------ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 262 v~G~~pl-------dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
. +..|+ |+. .++|.+++|+|| |+|.|+|+|+|++|++..+
T Consensus 207 g-~~~p~~~~~~~~~~~-~~vDSis~s~HK-~~g~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 207 G-LMMPFVSRAPEVTFR-KPIGSVSVSGHK-FLGCPMPCGVALTRKKHVK 253 (374)
T ss_pred h-hhhhccCCCcccCCC-cCCcEEEECccc-ccCCCcCeEEEEEEchhhH
Confidence 9 99985 554 379999999999 8777999999999987653
No 25
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=1.4e-23 Score=200.96 Aligned_cols=168 Identities=17% Similarity=0.149 Sum_probs=141.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEEeCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~ 201 (311)
...++++|+.+++++|+++. ++|+||+|+|+++++++.++ +++|+.|+ +..+|.+. .+..+++..|.+++.++.+
T Consensus 43 ~~~~~~~~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 120 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSS-AHVVFTNNATTALNIALKGL-LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD 120 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCC-CeEEEeCCHHHHHHHHHHhc-cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC
Confidence 45678999999999999643 36999999999999999885 57889986 44566532 3455566679999999987
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV 278 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl 278 (311)
. ++.++.++|+++++++ +++|++++. .||.++|+++|.+ ||++|+++++|++|++ |..++|+...++||+
T Consensus 121 ~-~~~~d~~~l~~~~~~~-----~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~-g~~~~~~~~~~~D~~ 193 (376)
T TIGR01977 121 N-EGLISPERIKRAIKTN-----TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTA-GVIPIDMTELAIDML 193 (376)
T ss_pred C-CCCcCHHHHHHhcCCC-----CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhcc-CccCCCchhcCCCEE
Confidence 5 6778999999998754 578887765 5999999999966 6999999999999999 999999999999999
Q ss_pred EEccccCcCCCCCceEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++|+|||++| |.|+|+|+++++.
T Consensus 194 ~~s~~K~l~~-p~g~g~l~~~~~~ 216 (376)
T TIGR01977 194 AFTGHKGLLG-PQGTGGLYIREGI 216 (376)
T ss_pred EecccccccC-CCCceEEEEcCCc
Confidence 9999995556 9999999999886
No 26
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=2.7e-23 Score=200.93 Aligned_cols=172 Identities=15% Similarity=0.143 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEe
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAP 199 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp 199 (311)
....+++|+.+++++|+++++ |+||+|+|++++++..++ .+++|++|++ ..+|.+. .+..+++..|+++..++
T Consensus 59 ~~~~~~l~~~ia~~~~~~~~~--v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~ 136 (397)
T TIGR01976 59 DQVVDDAREAVADLLNADPPE--VVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWAR 136 (397)
T ss_pred HHHHHHHHHHHHHHcCCCCCe--EEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEe
Confidence 345689999999999997654 999999999999888776 4678999874 4566543 34455677899999999
Q ss_pred CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539 200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPD 276 (311)
Q Consensus 200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~D 276 (311)
.+.+++.++.+++++.++++ +++|++++. .+|.++|+++|.+ ||++|+++++|++|++ |..++|+.++++|
T Consensus 137 ~~~~~~~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~~~d 210 (397)
T TIGR01976 137 VDEATGELHPDDLASLLSPR-----TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYA-PHGLIDVQATGAD 210 (397)
T ss_pred ccccCCCcCHHHHHHhcCCC-----ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhc-cccCCCHHHcCCC
Confidence 87546788999999999764 578888765 5999999999976 6999999999999999 9999999999999
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCCcccC
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTS 307 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~ 307 (311)
|+++|+|| |+| | ++|+++++++..+...
T Consensus 211 ~~~~s~~K-~~g-~-~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 211 FLTCSAYK-FFG-P-HMGILWGRPELLMNLP 238 (397)
T ss_pred EEEEechh-hcC-C-ceEEEEEcHHHHhhCC
Confidence 99999999 788 7 4999999987755433
No 27
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.90 E-value=1.1e-22 Score=195.05 Aligned_cols=189 Identities=10% Similarity=0.007 Sum_probs=146.0
Q ss_pred HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHH
Q 021539 109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGF 187 (311)
Q Consensus 109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~l 187 (311)
+.+.+...............+++|+.+++++|++++...|+||+|+|++++.++.++. .+|+.++ ....+....+...
T Consensus 20 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~ 98 (368)
T PRK13479 20 VREAMLRDWGSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGARIAQI 98 (368)
T ss_pred HHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHHHHHHH
Confidence 4444433333222223346789999999999997544468899999999999999985 4566654 4333333333455
Q ss_pred HHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCcc
Q 021539 188 AAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFG 264 (311)
Q Consensus 188 a~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G 264 (311)
++..|+++..+|.++ ++.++.+++++.+++++ .+++|.+++. .||.++|+++|.+ ||++|+++++|++|++ |
T Consensus 99 ~~~~g~~~~~i~~~~-~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-g 173 (368)
T PRK13479 99 AEYLGIAHVVLDTGE-DEPPDAAEVEAALAADP---RITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-G 173 (368)
T ss_pred HHHcCCcEEEEECCC-CCCCCHHHHHHHHHhCC---CCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-C
Confidence 677899999999875 56789999999887532 2457777665 5999999999966 6999999999999999 9
Q ss_pred CcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 265 EDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 265 ~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
..++|+.++++|++++|+|||++| |.|+|+++++++..+
T Consensus 174 ~~~~~~~~~~~d~~v~s~~K~l~g-~~G~G~l~~~~~~~~ 212 (368)
T PRK13479 174 AIPIDIAELGIDALISSANKCIEG-VPGFGFVIARRSELE 212 (368)
T ss_pred CccccccccCceEEEecCcccccc-CCCceEEEECHHHHH
Confidence 999999999999999999996667 899999999987543
No 28
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.90 E-value=4.8e-24 Score=205.72 Aligned_cols=168 Identities=11% Similarity=0.122 Sum_probs=125.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCC--CCCCCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYP--FFKGNYYL-TIISEESDYIKGFAAQKESKVIA 197 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~ 197 (311)
......++++|+.++++||++ ++++|+||+| +|+|+|+++.++. +.+|++|+ ...+|+ +..+++++|+++++
T Consensus 40 ~~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~---~~~~a~~~g~~~~~ 115 (355)
T cd00611 40 KDFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAK---AAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH---HHHHHHhcCCCcEE
Confidence 455577899999999999984 4567999998 9999999999983 23566665 444433 34466778999999
Q ss_pred EeCCCCCccc-C-HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539 198 APETWLDLRI-K-GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 198 vp~~~~~g~i-d-~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l 273 (311)
++.+. ++.. + .+..+..++++ +++|+++|+ +||++++ +|. +.+|++++|||+|++ |+.|+|++++
T Consensus 116 ~~~~~-~g~~~~~~~~~~~~~~~~-----~~lV~~~h~~t~tG~~~~--~i~--~~~g~~~~VDa~qs~-g~~~idv~~~ 184 (355)
T cd00611 116 VAAKE-EGKYTKIPDVETWDLAPD-----AAYVHYCSNETIHGVEFD--EVP--DTGGVPLVADMSSNI-LSRPIDVSKF 184 (355)
T ss_pred Eeccc-ccCCCCCCCHhhcCCCCC-----CCEEEEeCCcccccEEcc--eec--ccCCCeEEEEccccc-cCCCCCHHHh
Confidence 98753 2222 3 22222334433 679999988 5898743 333 458999999999999 9999999986
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
++ +++|+|| +|| |.|+|+||+|+++.+...|
T Consensus 185 ~~--~~ss~~K-~lG-P~G~g~l~~~~~~~~~~~~ 215 (355)
T cd00611 185 GV--IYAGAQK-NLG-PAGVTVVIVRKDLLGKARK 215 (355)
T ss_pred CE--EEeeccc-ccC-CCceEEEEECHHHHhhccc
Confidence 64 4477999 899 9999999999988765443
No 29
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.90 E-value=1.9e-22 Score=192.09 Aligned_cols=189 Identities=11% Similarity=0.105 Sum_probs=150.7
Q ss_pred chhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHH
Q 021539 106 PSRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDY 183 (311)
Q Consensus 106 ~~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~ 183 (311)
+.++.+.+.+. .++.+.......+++|+.+++++|+++ ++.++||+|+|+|+++++.++ +.+|+.|++. .+|.++.
T Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~~~~~~~~t~al~~~~~~~-~~~g~~vl~~~~~~~~~~ 88 (356)
T cd06451 11 PPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTEN-GLTFLLSGSGTGAMEAALSNL-LEPGDKVLVGVNGVFGDR 88 (356)
T ss_pred CHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCC-CCEEEEecCcHHHHHHHHHHh-CCCCCEEEEecCCchhHH
Confidence 44466666443 334444555667899999999999953 346889999999999999988 4689998754 4555544
Q ss_pred HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539 184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT 259 (311)
Q Consensus 184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa 259 (311)
+...++..|++++.+|.+. ++.++.+++++.+++ + +++|.+++. .+|.++|+++|.+ |+++|+++++|++
T Consensus 89 ~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~i~~~~-----~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~ 162 (356)
T cd06451 89 WADMAERYGADVDVVEKPW-GEAVSPEEIAEALEQHD-----IKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAV 162 (356)
T ss_pred HHHHHHHhCCCeEEeecCC-CCCCCHHHHHHHHhccC-----CCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeee
Confidence 4555677799999999875 567899999999976 3 567777655 5999999999976 6999999999999
Q ss_pred ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|++ |..++++...++|++++|+|| ++|+|.|+|+|+++++..+
T Consensus 163 ~~~-g~~~~~~~~~~~d~~~~s~~K-~l~~p~g~G~l~~~~~~~~ 205 (356)
T cd06451 163 SSL-GGEPFRMDEWGVDVAYTGSQK-ALGAPPGLGPIAFSERALE 205 (356)
T ss_pred hhc-cCccccccccCccEEEecCch-hccCCCCcceeEECHHHHH
Confidence 999 999999988899999999999 6655999999999987543
No 30
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=1.8e-22 Score=193.42 Aligned_cols=175 Identities=17% Similarity=0.177 Sum_probs=144.2
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYL-TIISEESD--YIKGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Il-s~~eh~~~--~~~~la~~~G~~V 195 (311)
+.......+++|+.+++++|+++ ..+|+||+|+|+|+++++.++... +|++|+ +..+|.+. .+..+++..|+++
T Consensus 38 ~~~~~~~~~~~~~~la~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 38 SARATDAYEAAREKVARFINAPS-PDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 34455667899999999999972 235999999999999999998654 788886 44555543 3445566679999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
+.+|.+. ++.++.++|++.+.++ +++|.+++. .+|.+.|+++|.+ |+++|+++++|++|+. |..++++.+
T Consensus 117 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~ 189 (373)
T cd06453 117 KVVPVDD-DGQLDLEALEKLLTER-----TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSA-GHMPVDVQD 189 (373)
T ss_pred EEeecCC-CCCcCHHHHHHHhcCC-----ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhc-Cceeeeccc
Confidence 9999885 7889999999999764 578887765 5999999999965 7999999999999999 999999998
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
+++|++++|+|| ++| |.|+|+++++++..+.
T Consensus 190 ~~~d~~~~s~~K-~~~-~~g~g~~~~~~~~~~~ 220 (373)
T cd06453 190 LGCDFLAFSGHK-MLG-PTGIGVLYGKEELLEE 220 (373)
T ss_pred cCCCEEEecccc-ccC-CCCcEEEEEchHHhhc
Confidence 999999999999 788 5799999999876654
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=1.3e-22 Score=201.90 Aligned_cols=173 Identities=13% Similarity=0.007 Sum_probs=132.9
Q ss_pred chhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEe---CCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH--HHHHHh--
Q 021539 120 KGNFISIPEIQ-ARNRALKHCGLSEDEYLVLFV---PNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI--KGFAAQ-- 190 (311)
Q Consensus 120 ~G~~~~~~le~-aR~~IA~~Lga~~dey~VvFT---snaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~--~~la~~-- 190 (311)
.|......+|+ +|++++++||+++++ ++|| +++|+|+++++.++ +++||+|+ +..+|.+... ..+.+.
T Consensus 73 ~g~~~~~~iE~~ar~~~a~lf~a~~~~--~~~~~~~~sgt~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~ 149 (452)
T PTZ00094 73 GGNEVVDKIENLCQKRALEAFGLDPEE--WGVNVQPYSGSPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHGFYTAKKKV 149 (452)
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCccc--ceeecCCCchHHHHHHHHHHh-cCCCCEEEecccccCCccccccccccccc
Confidence 47777888884 999999999997665 8888 89999999999998 68899987 5667764322 211111
Q ss_pred ----CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccC
Q 021539 191 ----KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE 265 (311)
Q Consensus 191 ----~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~ 265 (311)
.++++...+++. +|.+|.++|++.+++. ++++|.+....+|.++|+++|++ ||++|++++||++|++ |+
T Consensus 150 ~~~~~~~~~~~~~~~~-~g~id~~~L~~~l~~~----~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~-G~ 223 (452)
T PTZ00094 150 SATSIYFESLPYQVNE-KGLIDYDKLEELAKAF----RPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTS-GL 223 (452)
T ss_pred ccceeeeeeeecccCC-CCCcCHHHHHHHHHHh----CCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchh-cc
Confidence 124445556665 5899999999999642 13466554336999999999976 6999999999999999 99
Q ss_pred cccCCCC---CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 266 DQLALAL---HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 266 ~pldl~~---l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
+++|+.. .++||+++|+|||++| |.| |+++++++..
T Consensus 224 i~~~~~~~~~~~~D~l~~S~hK~l~G-P~G-g~l~~~~~~~ 262 (452)
T PTZ00094 224 VAAGVLPSPFPYADVVTTTTHKSLRG-PRS-GLIFYRKKVK 262 (452)
T ss_pred ccCCCCCCCCCCCcEEEcCCccCCCC-CCc-eEEEEecccc
Confidence 9887643 3699999999996667 998 8888887653
No 32
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.88 E-value=1.4e-21 Score=184.57 Aligned_cols=173 Identities=11% Similarity=0.020 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEE-EEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYY-LTIISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~I-ls~~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
....+++|+.+++++|++++...|+||+|+|++++.++.++. .+++.+ +....++...+...++..|.++..++.++
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~- 107 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE- 107 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC-
Confidence 466789999999999998654468899999999999999874 345554 44333332223445667799999999875
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
++.++.+++++.+++++ ...++++++. .+|+++|+++|.+ |+++|+++++|++|++ |..++++..+++|++++
T Consensus 108 ~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~-g~~~~~~~~~~~d~~~~ 183 (355)
T TIGR03301 108 YEPPDLNRIEEALAADP---DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSF-GAIPIDIEELDVDALIA 183 (355)
T ss_pred CCCCCHHHHHHHHHhCC---CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEecccc-CCcccchhhcCccEEEe
Confidence 56789999999987532 2457776655 5899999999976 6999999999999999 99999999999999999
Q ss_pred ccccCcCCCCCceEEEEEeCCCCc
Q 021539 281 TLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 281 S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|+|||++| |.|+|+++++++..+
T Consensus 184 s~~K~l~~-~~G~g~~~~~~~~~~ 206 (355)
T TIGR03301 184 SANKCLEG-VPGFGFVIARRDLLE 206 (355)
T ss_pred cCCccccc-CCceeEEEECHHHHH
Confidence 99995556 889999999987643
No 33
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.87 E-value=9.8e-21 Score=184.33 Aligned_cols=174 Identities=16% Similarity=0.143 Sum_probs=140.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEe
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAP 199 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp 199 (311)
+......++++|+.+|+++|++ + ++||+|+|+|+++++.++ +.+|+.|++ ..+|.+.. ..++..|+++..+|
T Consensus 58 ~~~~~~~~~~l~~~lA~~~g~~--~--~~~~~g~t~a~~~al~~l-~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~ 130 (387)
T PRK09331 58 DQIKKPPIADFHEDLAEFLGMD--E--ARVTHGAREGKFAVMHSL-CKKGDYVVLDGLAHYTSY--VAAERAGLNVREVP 130 (387)
T ss_pred ccccChHHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHh-cCCCCEEEECCCchHHHH--HHHHHcCCEEEEEe
Confidence 4444556889999999999994 3 889999999999999988 578998864 44554432 23456799999999
Q ss_pred C--CCCCcccCHHHHHhhhhccCC--CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 200 E--TWLDLRIKGSQLSQNFRRKCK--YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 200 ~--~~~~g~id~~~L~~~l~~~~~--~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
. ++ ++.++.+++++.+++... ...+++|++++. .+|.++|+++|.+ ||++|+++++|++|++ |..|+++..
T Consensus 131 ~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~-g~~~~~~~~ 208 (387)
T PRK09331 131 KTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTV-GRMPVDGKK 208 (387)
T ss_pred CccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-CCcCCCHHH
Confidence 8 54 677999999998874210 013678888766 5999999999976 6999999999999999 999999999
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+++|++++|+|| ++|+|.|+|+++++++.++
T Consensus 209 ~g~D~~~~s~~K-~l~~~~~~G~l~~~~~~i~ 239 (387)
T PRK09331 209 LGADFIVGSGHK-SMAASAPSGVLATTEEYAD 239 (387)
T ss_pred cCCCEEEeeCcc-cccCCCCEEEEEECHHHHh
Confidence 999999999999 5555889999999887554
No 34
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=1.8e-21 Score=188.83 Aligned_cols=168 Identities=12% Similarity=-0.001 Sum_probs=126.5
Q ss_pred CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhC--CcE
Q 021539 118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQK--ESK 194 (311)
Q Consensus 118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~--G~~ 194 (311)
++........++++|+.+++++|++ ++++|+|| +|+|.|+|.++.++...++. +++. +++...+...+... +.+
T Consensus 33 ~hr~~~f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~~~l-~i~~-G~~~~~~~~~a~~~~~~~~ 109 (361)
T TIGR01366 33 SHRQAPVKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEKKSL-HLSF-GEFSSKFAKAVKLAPWLGE 109 (361)
T ss_pred CcCChHHHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhccccccc-EEec-CHHHHHHHHHHHhhhccCC
Confidence 4556777788999999999999995 35679997 66999999999998433322 2333 33433343333321 226
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCC
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
+..++.++ +..++. .+.++ +++|+++|+ ++|+++|+++| +|++|++++|||+|++ |+.++|+++
T Consensus 110 ~~~~~~~~-~~~~~~-----~~~~~-----~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~-g~~~idv~~ 175 (361)
T TIGR01366 110 PIIVTADP-GSAPEP-----QADPG-----VDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGA-GGLPVDIAE 175 (361)
T ss_pred ceEEecCC-CCCCCC-----ccCCC-----CCEEEEcccCCccceecccccc--cccCCCeEEEEcCccc-cCCCCCHHH
Confidence 77777765 333332 23333 689999988 69999999998 4889999999999999 999999985
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
+||++||+|| ++|.|.|+++++++++.++.
T Consensus 176 --~D~~~~s~~K-~lg~~~Gl~~~~~s~~~~~~ 205 (361)
T TIGR01366 176 --TDVYYFAPQK-NFASDGGLWLAIMSPAALER 205 (361)
T ss_pred --CCEEEEEchh-hcCCCCceEEEEECHHHHhh
Confidence 9999999999 88868899999999977654
No 35
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.84 E-value=1.6e-20 Score=181.66 Aligned_cols=165 Identities=12% Similarity=0.121 Sum_probs=126.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
....++++|+.++++||++ ++|+|+|++| +|+||+.++.++. .+|+.++ ...+.....+.+.+++.|. +..+..+
T Consensus 35 f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~ 111 (349)
T TIGR01364 35 FEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASG 111 (349)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEecc
Confidence 3467789999999999984 4567999976 9999999999984 3677653 3334334446677888898 7776643
Q ss_pred ----CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 202 ----WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 202 ----~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
| ...+++++++ +++ ..++|+++|+ +||+.+| ++ ++.++++++|||+|++ |+.|+|+++ .
T Consensus 112 ~~~~~-~~~~~~~~~~--~~~-----~~~~v~~th~ETstGv~~~--~l--~~~~~~l~iVDavss~-g~~~id~~~--~ 176 (349)
T TIGR01364 112 KEGNY-TKIPDPSTWE--ISE-----DAAYVHYCANETIHGVEFR--EL--PDVKNAPLVADMSSNI-LSRPIDVSK--F 176 (349)
T ss_pred ccCCC-CCCCCHHhcC--CCC-----CCCEEEEcCCCCcccEecc--ee--cccCCCeEEEEccccc-cCccCCHHH--c
Confidence 2 2234555444 222 2579999988 6999988 22 3567999999999999 999999986 5
Q ss_pred cEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
||+++|+|| ++| |.|+|+|++++++++...|
T Consensus 177 d~~~~ssqK-~lg-P~Glg~l~~s~~~~~~~~~ 207 (349)
T TIGR01364 177 GLIYAGAQK-NIG-PAGLTVVIVRKDLLGRASR 207 (349)
T ss_pred cEEEEeccc-ccC-CCceEEEEECHHHHhhccc
Confidence 699999999 899 9999999999988765444
No 36
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.83 E-value=3.6e-20 Score=199.03 Aligned_cols=169 Identities=14% Similarity=0.093 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHH----HHHHHHHhcCCCCCCC----EEE-EccCcChHHHHHHHHhCCcEEE
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYK----EAMLMIGESYPFFKGN----YYL-TIISEESDYIKGFAAQKESKVI 196 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaT----ealnlv~~s~~~~~Gd----~Il-s~~eh~~~~~~~la~~~G~~V~ 196 (311)
..++++|+.+++++|+ ++ |+||+|+| +|+|+++++|--.+|+ +|+ +..+|++|.. . +...|++|+
T Consensus 568 ~~~~~~r~~la~i~g~--~~--v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a-~-a~~~G~~vv 641 (993)
T PLN02414 568 EMFEDLGDLLCEITGF--DS--FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA-S-AAMCGMKIV 641 (993)
T ss_pred HHHHHHHHHHHHHhCC--Ce--EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH-H-HHHCCCEEE
Confidence 4467999999999999 34 99999999 9999999999323376 554 6778886642 1 223699999
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cccCCCC
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQLALAL 272 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pldl~~ 272 (311)
.+|.+. +|.+|.++|+++++++++ ++++|++++. +.|...||++|.+ +|++|++|++||+|++ ++ ..++..+
T Consensus 642 ~v~~d~-~G~vDle~L~~~i~~~~~--~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~-a~~~l~~p~~ 717 (993)
T PLN02414 642 VVGTDA-KGNINIEELRKAAEAHKD--NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMN-AQVGLTSPGF 717 (993)
T ss_pred EeccCC-CCCcCHHHHHHHHhccCC--CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHH-hccCcCCccc
Confidence 999975 789999999999985321 3678888765 5899999999976 6999999999999999 98 6667788
Q ss_pred CCCcEEEEccccCcCCCCC-----ceEEEEEeCCCCcc
Q 021539 273 HRPDLVLCTLDNNTHAQPL-----KITCLLVRRKSFDT 305 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~-----GiG~L~vr~~~~~~ 305 (311)
+++||++||+||||+| |. |+|+|++++.+...
T Consensus 718 ~GaD~~~~s~HK~f~~-P~G~GGPg~G~l~~~~~L~p~ 754 (993)
T PLN02414 718 IGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPF 754 (993)
T ss_pred cCCCEEEecCCccCCc-CcccCCCCeeeEEEchhhccc
Confidence 9999999999996553 55 59999999876543
No 37
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.83 E-value=3e-20 Score=180.38 Aligned_cols=170 Identities=13% Similarity=0.081 Sum_probs=125.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~v 198 (311)
........+++|+.++++||++ ++|+|+|++ ++|.++..++.++- .+|+.++ ...+.....+.+.+++.|.. ..+
T Consensus 43 ~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~-~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~ 119 (360)
T PRK05355 43 SKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLL-GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVA 119 (360)
T ss_pred CHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEE
Confidence 4444577899999999999984 456688875 56666777777663 4566653 22232233456777787865 556
Q ss_pred eCCCCCcccCHHHHHh-hhhccCCCCCceEEEEecc--cccchh-cHHHHHHHHHCCcEEEecccccCccCcccCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQ-NFRRKCKYTPKGLFSYPVV--VNGTRY-SMHWISEAHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 199 p~~~~~g~id~~~L~~-~l~~~~~~~~t~LVs~~~~--~tG~i~-Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
+.++..+..+..++++ .++++ +++|+++|+ +||+++ ||.+| +|++++|||+|++ |+.|+|++++
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~~-----~~~V~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~-g~~~idv~~~- 187 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSDD-----AAYVHYTSNETIDGTEFHELPDT-----GDVPLVADMSSDI-LSRPIDVSKF- 187 (360)
T ss_pred ecccccCCCCCCChhhccCCCC-----CCEEEEccCCCcceEecCccccc-----CCCcEEEEcCccc-cCccCCHHHc-
Confidence 5543234445445544 66543 579999988 699998 77766 7999999999999 9999999875
Q ss_pred CcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
||++||+|| ++| |.|+|+||+++++++...|
T Consensus 188 -d~~~~ssqK-~lg-P~Glg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 188 -GLIYAGAQK-NIG-PAGLTIVIVREDLLGRALP 218 (360)
T ss_pred -cEEEEeccc-ccc-CCceEEEEECHHHHhhccc
Confidence 799999999 889 9999999999998876555
No 38
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.81 E-value=9.5e-19 Score=167.02 Aligned_cols=164 Identities=13% Similarity=-0.042 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
..++++|+.+|+++|++++. ++||+|+|++++.++.++ .++++++|+ +..+|.+ +...++..|.+++.+|.+
T Consensus 59 ~~~~~~~~~la~~~g~~~~~--~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~~ 134 (371)
T PRK13520 59 KLEEEAVEMLGELLHLPDAY--GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS--FDKAADMLGVELRRAPLD 134 (371)
T ss_pred HHHHHHHHHHHHHhCCCCCC--eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH--HHHHHHHcCceEEEecCC
Confidence 44579999999999997543 899999999988876543 234567776 4555543 455566679999999987
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-------cCCC
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-------LALA 271 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-------ldl~ 271 (311)
+ ++.++.++|++.++++ +.+|++.+. .+|.+.|+++|.+ ||++|++++||++|+. +..+ +|+.
T Consensus 135 ~-~~~~d~~~l~~~i~~~-----~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~~~~ 207 (371)
T PRK13520 135 D-DYRVDVKAVEDLIDDN-----TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGG-FVIPFLDDPPNFDFS 207 (371)
T ss_pred C-CCcCCHHHHHHHHhhC-----CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchh-HHHHhhcCCCCcccc
Confidence 6 6789999999999764 344544433 6999999999976 6999999999999986 6433 4555
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
..++|++++|+|| |.+.|.++|+++++++
T Consensus 208 ~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 208 LPGVDSITIDPHK-MGLAPIPAGGILFRDE 236 (371)
T ss_pred CCCCceEEECCcc-ccCccCCceEEEEcCH
Confidence 5789999999999 5444888999998764
No 39
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.7e-18 Score=169.50 Aligned_cols=189 Identities=12% Similarity=0.135 Sum_probs=157.3
Q ss_pred HHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHH
Q 021539 109 LLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKG 186 (311)
Q Consensus 109 l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~ 186 (311)
.+..+..+ .++.-........++++.+..+++++. .+.+++++++|.|+...+.++ ..+||+|+ ...+-....|.+
T Consensus 20 V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~-~~~~ll~gsGt~amEAav~sl-~~pgdkVLv~~nG~FG~R~~~ 97 (383)
T COG0075 20 VLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTEN-GDVVLLSGSGTLAMEAAVASL-VEPGDKVLVVVNGKFGERFAE 97 (383)
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-CcEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCChHHHHHHH
Confidence 44444444 343445555677899999999999973 346778899999999998888 46899985 555666777888
Q ss_pred HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539 187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF 263 (311)
Q Consensus 187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~ 263 (311)
.+++.|.+|..+...| +..++++++++.|+++. ..++|++.|+ +||+++|+++|++ ++++|++++|||+.++
T Consensus 98 ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~~~---~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~- 172 (383)
T COG0075 98 IAERYGAEVVVLEVEW-GEAVDPEEVEEALDKDP---DIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSL- 172 (383)
T ss_pred HHHHhCCceEEEeCCC-CCCCCHHHHHHHHhcCC---CccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccC-
Confidence 8999999999999988 66899999999998542 2568998888 6999999999977 5999999999999999
Q ss_pred cCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 264 GEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 264 G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
|-.+++++++++|+++.+.+| +++.|+|+|++.++++.++.
T Consensus 173 Gg~~~~vd~wgiDv~itgSQK-~l~~PPGla~v~~S~~a~e~ 213 (383)
T COG0075 173 GGEPLKVDEWGIDVAITGSQK-ALGAPPGLAFVAVSERALEA 213 (383)
T ss_pred CCcccchhhcCccEEEecCch-hccCCCccceeEECHHHHHH
Confidence 999999999999999999999 77779999999999877653
No 40
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=1.9e-18 Score=171.96 Aligned_cols=160 Identities=11% Similarity=-0.011 Sum_probs=128.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcC--hHHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEE--SDYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|+. . .+||+|+|+|+++++.++ +++||+|+ +..+|. .+.+...+.+.|+++++
T Consensus 59 ~R~~~p~~~~le~~lA~l~g~~--~--av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 59 SRISNPTVAVLEERVAALEGGV--G--AIATASGQAALHLAIATL-MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred ecCcChHHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 3444455778999999999984 2 799999999999999888 78999986 556665 23344444567999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ |+++++++++++ |++|.+.+. .+|.++|+++|.+ ||++|+++++|++|+. |....++ +++
T Consensus 134 vd~~------d~~~l~~~i~~~-----TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~-~~~~~pl-~~G 200 (433)
T PRK08134 134 VKPG------DIDGWRAAIRPN-----TRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT-PYLLRPF-EHG 200 (433)
T ss_pred ECCC------CHHHHHHhcCCC-----CeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcC
Confidence 8864 578899999875 578877655 5899999999976 6999999999999999 9887776 689
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+|++++|+|| ++| |.| +|.+++..
T Consensus 201 aD~vv~S~tK-~l~-g~g~~~gG~v~~~ 226 (433)
T PRK08134 201 ADLVYHSATK-FLG-GHGTAIGGVLVDG 226 (433)
T ss_pred CCEEEecccc-ccC-CCCCceEEEEEec
Confidence 9999999999 777 556 78888753
No 41
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.79 E-value=2.2e-18 Score=165.54 Aligned_cols=169 Identities=18% Similarity=0.167 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
..+.+.|+.+|+++|+ ++ |+||+|+|+++++++.++ ..+|+.|+.. .+|.+.. ..++..|++++.+|.++ +
T Consensus 44 ~~~~~l~~~la~~~g~--~~--i~~~~g~t~al~~~l~~~-~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~-~ 115 (361)
T cd06452 44 PPIKDFHHDLAEFLGM--DE--ARVTPGAREGKFAVMHSL-CEKGDWVVVDGLAHYTSY--VAAERAGLNVREVPNTG-H 115 (361)
T ss_pred chHHHHHHHHHHHcCC--ce--EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCcchHHH--HHHHhcCCEEEEEecCC-C
Confidence 3567999999999999 33 999999999999999887 5689988744 5565432 23566799999999875 3
Q ss_pred c--ccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcE
Q 021539 205 L--RIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDL 277 (311)
Q Consensus 205 g--~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Df 277 (311)
+ .++.++|++.+++..+. .++++|.+++. .+|.+.|+++|.+ +|++|+++++|++|+. |..+++..++++|+
T Consensus 116 ~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~-g~~~~~~~~~~~d~ 194 (361)
T cd06452 116 PEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTV-GRMPVSGKELGADF 194 (361)
T ss_pred CCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCccc-CCcCCCHHHcCCCE
Confidence 3 78999999888641110 12578877655 5999999999976 6999999999999999 99999988889999
Q ss_pred EEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+++|+|| ++|.|.++|+++++++..+
T Consensus 195 ~~~s~~K-~l~~~~~~G~l~~~~~~~~ 220 (361)
T cd06452 195 IVGSGHK-SMAASAPIGVLATTEEWAD 220 (361)
T ss_pred EEecCCc-cccCCCCeEEEEECHHHHH
Confidence 9999999 6555788999999876543
No 42
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.78 E-value=9.8e-18 Score=160.40 Aligned_cols=164 Identities=13% Similarity=-0.007 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---C--CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEe
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---F--FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAP 199 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~--~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp 199 (311)
...+++|+.+|+++|++++. +++|+|+|+++..++.++. + .+|+.|++. .+|.+ +...++..|++++.+|
T Consensus 59 ~~~~~~~~~la~~~g~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~--~~~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAY--GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS--FEKAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCC--eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH--HHHHHHHcCCeEEEEe
Confidence 45579999999999997544 8889999999877655431 1 356787644 44433 4455667799999999
Q ss_pred CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccC----------cc
Q 021539 200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE----------DQ 267 (311)
Q Consensus 200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~----------~p 267 (311)
.++ ++.++.++|++.+.+++ ..++.+... .+|++.|+++|.+ ||++|++++||++|+. +. .+
T Consensus 135 ~~~-~~~~d~~~l~~~l~~~~----~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~-~~~~~~~~~~~~~~ 208 (373)
T TIGR03812 135 LDE-DYTVDVKDVEDLIDDNT----IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGG-FVIPFLKKGYNPPP 208 (373)
T ss_pred eCC-CCCcCHHHHHHHHhhCc----EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchh-HHHHHHhcCCCCCC
Confidence 875 67889999999987642 245554433 6999999999976 6999999999999985 43 25
Q ss_pred cCCCCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
+|+...++|++++|+|| |..+|.|+|++++++
T Consensus 209 ~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~ 240 (373)
T TIGR03812 209 FDFSLPGVQSITIDPHK-MGLSPIPAGGILFRS 240 (373)
T ss_pred ccccCCCCCEEEECccc-cCCCcCCceEEEEeC
Confidence 67766689999999999 543388888777643
No 43
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=2.4e-17 Score=138.10 Aligned_cols=160 Identities=15% Similarity=0.049 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
++++|+.++++++++.+ .++|++|+|+|+.+++.++. .+++.++ +..+|+...+ ..++..|+++..++.+. ++.
T Consensus 2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~-~~~ 76 (170)
T cd01494 2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDD-AGY 76 (170)
T ss_pred HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehh-hHHHhcCCEEEEeccCC-CCc
Confidence 46899999999985434 49999999999999999984 4577775 4555553332 34456699999998765 322
Q ss_pred cCH--HHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---CCCCCCCcEE
Q 021539 207 IKG--SQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---ALALHRPDLV 278 (311)
Q Consensus 207 id~--~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---dl~~l~~Dfl 278 (311)
... +.+++.... .++.++.+++. .+|..+|+++|.+ ++++|+++++|++|.. +.... +....++|++
T Consensus 77 ~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~d~~ 151 (170)
T cd01494 77 GGLDVAILEELKAK----PNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAG-GASPAPGVLIPEGGADVV 151 (170)
T ss_pred cchhhhhhhhcccc----CceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccc-ccccccccccccccCCEE
Confidence 222 234333221 23577777655 5899999999976 6999999999999999 87776 6777889999
Q ss_pred EEccccCcCCCCCceEEEEEe
Q 021539 279 LCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 279 ~~S~HK~l~G~P~GiG~L~vr 299 (311)
++|+|| ++|+ .|+|+|++|
T Consensus 152 ~~s~~K-~~~~-~~~G~l~~~ 170 (170)
T cd01494 152 TFSLHK-NLGG-EGGGVVIVK 170 (170)
T ss_pred EEEccc-ccCC-CceEEEEeC
Confidence 999999 7774 699999986
No 44
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.76 E-value=2.5e-18 Score=162.60 Aligned_cols=174 Identities=17% Similarity=0.018 Sum_probs=125.6
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-----------CCC--CEEE-EccCcChHHHHH
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-----------FKG--NYYL-TIISEESDYIKG 186 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-----------~~G--d~Il-s~~eh~~~~~~~ 186 (311)
+......++++++.+++++|++.++..++||+|+|+|+++++.++.. .++ ..|+ +..+|.+ +..
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~~~ 110 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS--VEK 110 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH--HHH
Confidence 34455566789999999999962233599999999999988776421 022 2454 4445553 222
Q ss_pred HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539 187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLV 262 (311)
Q Consensus 187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv 262 (311)
.++..|.+++.+|.+. ++.++.++|++.+++... ..++.+|++++. .+|.+.|+++|.+ |+++|+++|+|++|+.
T Consensus 111 ~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence 2334488999999875 568999999999975100 012456665543 6999999999976 6999999999999999
Q ss_pred ccCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 263 FGEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 263 ~G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
+..+++... .++|++++|+|| ++++|.|+|+++++
T Consensus 190 -~~~~~~~~~~~~~~~~~~d~~~~s~~K-~l~~p~g~g~~~~~ 230 (345)
T cd06450 190 -FLLPFPEPRHLDFGIERVDSISVDPHK-YGLVPLGCSAVLVR 230 (345)
T ss_pred -HHhhChhhHHHhcCccccCEEEEchhH-hhCCCcchHHHHHH
Confidence 887765332 379999999999 55449999988765
No 45
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.76 E-value=6e-18 Score=172.06 Aligned_cols=175 Identities=15% Similarity=0.021 Sum_probs=122.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCC-----------CCCCeEEEeCCHHHHHHHH---HhcCCCC------------------
Q 021539 121 GNFISIPEIQARNRALKHCGLS-----------EDEYLVLFVPNYKEAMLMI---GESYPFF------------------ 168 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~-----------~dey~VvFTsnaTealnlv---~~s~~~~------------------ 168 (311)
+..++.++.++-.-++++++.. ++...-+||+|+|+|+.+. ++...+.
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~ 203 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALK 203 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhh
Confidence 3344455567888888888532 2223468999999997653 3221110
Q ss_pred ----CCCEEE-EccCcChHHHHHHHHhCCc---EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc----ccc
Q 021539 169 ----KGNYYL-TIISEESDYIKGFAAQKES---KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV----VNG 236 (311)
Q Consensus 169 ----~Gd~Il-s~~eh~~~~~~~la~~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~----~tG 236 (311)
++..|+ |..+|++ +...++..|. +++.+|++. ++++|.++|++.+++... ..+++|++.+. ++|
T Consensus 204 ~~~~~~~~v~~S~~~H~S--~~kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~~-~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 204 HYGYDGLAILVSERGHYS--LGKAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELAE-QNIKPLAIVGVAGTTETG 279 (522)
T ss_pred hccCCceEEEECCCchHH--HHHHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHHH-CCCCcEEEEEEecCcCCC
Confidence 112344 5566664 3334444566 788999986 789999999998863211 12345544322 699
Q ss_pred chhcHHHHHH-HHHCCcEEEecccccCccCcccC-----CCCC-CCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 237 TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-----LALH-RPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 237 ~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-----l~~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
.+.|+++|++ |+++|+++||||||+. +....+ +..+ ++|++++|+|||++| |.|+|+|++|+.
T Consensus 280 aiDpl~eIa~i~~~~g~~lHVDaA~gg-~~~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~ 349 (522)
T TIGR03799 280 NIDPLDEMADIAQELGCHFHVDAAWGG-ATLLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDP 349 (522)
T ss_pred CcCCHHHHHHHHHHcCCeEEEEchhhh-HHHhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCH
Confidence 9999999976 6999999999999998 877766 5654 799999999996666 999999999964
No 46
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.75 E-value=1.9e-17 Score=160.62 Aligned_cols=168 Identities=14% Similarity=0.146 Sum_probs=123.3
Q ss_pred CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC---------------EEEEccCcChH
Q 021539 118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN---------------YYLTIISEESD 182 (311)
Q Consensus 118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd---------------~Ils~~eh~~~ 182 (311)
.|.+ ....++++++.+|+++|++ + ++||+|+|+|+++++.++ +.+|| +|+....|..+
T Consensus 39 ~~~~--~~~~~~~~~~~~a~~~g~~--~--~~~~~g~t~al~~al~al-~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~ 111 (363)
T TIGR01437 39 NYFE--IKELVNKTGEYIANLLGVE--D--AVIVSSASAGIAQSVAAV-ITRGNRYLVENLHDSKIEVNEVVLPKGHNVD 111 (363)
T ss_pred cCCC--HHHHHHHHHHHHHHhhCCC--e--EEEEcCHHHHHHHHHHHH-hcCCCcchhhcccccccccceEEEECccchh
Confidence 4543 3455789999999999984 3 899999999999999887 56676 66655554432
Q ss_pred H---HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEe
Q 021539 183 Y---IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLL 256 (311)
Q Consensus 183 ~---~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlv 256 (311)
. +.......|+++++++.+ +.++++++++++++++ ..++.++ ++.+|.++|+++|.+ ||++|+++++
T Consensus 112 ~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t----~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~viv 184 (363)
T TIGR01437 112 YGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKT----AAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIV 184 (363)
T ss_pred cCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhc----eEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEE
Confidence 1 233345568898888764 3589999999998763 2233332 346899999999976 6999999999
Q ss_pred cccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 257 DATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 257 DAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|++|+. .-. .+..+++|+++||+|||+.| |+ .|+|+.+++.++
T Consensus 185 D~a~~~-~~~--~~~~~g~D~~~~S~~K~l~g-p~-~G~l~~~~~~i~ 227 (363)
T TIGR01437 185 DAAAEE-DLQ--KYYRLGADLVIYSGAKAIEG-PT-SGLVLGKKKYIE 227 (363)
T ss_pred ECCCCC-chH--HHHHcCCCEEEEeCCcccCC-Cc-eEEEEEcHHHHH
Confidence 999985 211 12245799999999996656 98 899887765544
No 47
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.74 E-value=8.5e-17 Score=155.71 Aligned_cols=170 Identities=13% Similarity=0.099 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC-CC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW-LD 204 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~-~~ 204 (311)
.+.+.|+.+|+++|++ + +++++|++++++.++.++ ..+|+.|++. .+|.+.. ..++..|+++..+|.+. ++
T Consensus 52 ~~~~~~e~lA~~~g~~--~--~~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s~~--~~~~~~g~~~~~~~~~~~~~ 124 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMD--E--ARVTHGAREGKFAVMHAL-CKEGDWVVLDGLAHYTSY--VAAERAGLNVKEVPHTGHPE 124 (370)
T ss_pred HHHHHHHHHHHHhCCC--c--eEEECChHHHHHHHHHHh-hCCCCEEEECCcccHHHH--HHHHHcCCEEEEEecCCccc
Confidence 4678899999999995 3 667899999999999988 4788998754 5555443 33566799999999753 24
Q ss_pred cccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539 205 LRIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL 279 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~ 279 (311)
+.+|.++|++.+++.... ..+++|++++. .+|.+.|+++|.+ ++++|+++++|++|+. |..++++...++|+++
T Consensus 125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~-g~~~~~~~~~~~di~v 203 (370)
T TIGR02539 125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTV-GRMPVSAKEIGADFIV 203 (370)
T ss_pred CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECcccc-CCcCCCHHHcCCCEEE
Confidence 678999999988642100 12567777655 5999999999976 6999999999999999 9888888777899999
Q ss_pred EccccCcCCCCCceEEEEEeCCCCcc
Q 021539 280 CTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 280 ~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
.|+|| ++|.+.++|+++.++++++.
T Consensus 204 ~s~sK-~~~~~g~~G~l~~~~~~i~~ 228 (370)
T TIGR02539 204 GSGHK-SMAASGPCGVLGMSEEWEDI 228 (370)
T ss_pred eeCcc-cccCCCCEEEEEECHHHHhh
Confidence 99999 77645568999998876653
No 48
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.74 E-value=5.4e-17 Score=156.80 Aligned_cols=169 Identities=13% Similarity=0.058 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYLT-IISEESD--YIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~ 200 (311)
...++.++.+++++|++.++ ++|+.|++++.+.++.+..+. +|+.|+. ...|.+. .+..+.++.|++++.+|.
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~ 141 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS 141 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc
Confidence 55679999999999997554 888887776655544433233 4888864 4455532 344333455789999998
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcH-HHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcE
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSM-HWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDL 277 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi-~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Df 277 (311)
+. ++.++.++|++.+.++ +++|++.+. .+|.+.|+ ++|.+ |+++|+++++|++|+. |..+.+...+++|+
T Consensus 142 ~~-~~~~d~~~l~~~i~~~-----t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~-~~~~~~~~~~~~d~ 214 (398)
T cd00613 142 DE-GGTVDLEALKEEVSEE-----VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLN-LTGLKPPGEYGADI 214 (398)
T ss_pred CC-CCCcCHHHHHHhcCCC-----eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccc-ccCCCChHHcCCCE
Confidence 64 5678999999988764 567766554 58999996 99966 7999999999999998 88888887889999
Q ss_pred EEEccccCcCCCC-----CceEEEEEeCCCCcc
Q 021539 278 VLCTLDNNTHAQP-----LKITCLLVRRKSFDT 305 (311)
Q Consensus 278 l~~S~HK~l~G~P-----~GiG~L~vr~~~~~~ 305 (311)
+++|+|| +++ | .|+|+|++++++.+.
T Consensus 215 ~~~s~~K-~~~-p~g~Ggp~~g~l~~~~~~~~~ 245 (398)
T cd00613 215 VVGNLQK-TGV-PHGGGGPGAGFFAVKKELVRF 245 (398)
T ss_pred EEeeccc-cCC-CCCCCCCceeEEEEhhhhHhh
Confidence 9999999 553 4 478999999877654
No 49
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.69 E-value=2.5e-16 Score=155.72 Aligned_cols=168 Identities=11% Similarity=0.029 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~ 201 (311)
...+.+.++.+++++|++++ ++++|+|+|++++.++.++.+.+|++|+ +..+|.+ ..++.+++..|.+++.+|.+
T Consensus 111 ~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~ 188 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE 188 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence 34455777889999999765 4999999999998888777556788876 4556653 33455566679999999987
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEe--cccccCccCcccCCCCCCCcE
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLL--DATGLVFGEDQLALALHRPDL 277 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlv--DAaQsv~G~~pldl~~l~~Df 277 (311)
+ + .++.++|+++++++ +++|++++. .+|.+.|+++|.+ ||++|+++++ |+. ++ |..+. ..++++|+
T Consensus 189 ~-~-~~d~~~l~~~i~~~-----t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~-g~~~~-~~~~~~D~ 258 (447)
T PRK00451 189 D-G-VTDLEALEAAVDDD-----TAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SL-GLLKP-PGEYGADI 258 (447)
T ss_pred C-C-CCCHHHHHHhcCCC-----eEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-Hh-ccCCC-cccCCCCE
Confidence 5 5 88999999999765 567766544 6999999999976 6999999988 755 55 65543 35679999
Q ss_pred EEEccccC----cCCCCCceEEEEEeCCCCcc
Q 021539 278 VLCTLDNN----THAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 278 l~~S~HK~----l~G~P~GiG~L~vr~~~~~~ 305 (311)
+++|+||| .+|+| |+|++++++++.+.
T Consensus 259 ~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~ 289 (447)
T PRK00451 259 VVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQ 289 (447)
T ss_pred EEECCCcCCCCCCCCCC-CchHHHhhHHHHhh
Confidence 99999994 25657 89999999877665
No 50
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.68 E-value=3.1e-16 Score=153.36 Aligned_cols=166 Identities=14% Similarity=-0.016 Sum_probs=119.3
Q ss_pred hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HH-HHHHHhCCcEE
Q 021539 121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YI-KGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~-~~la~~~G~~V 195 (311)
|......+++ +|+.+++++|++.. .|+|++ +|+|+++++.++ +++||.|+ +..+|... .+ .......|.++
T Consensus 65 ~~~~~~~~e~~~~~~la~~~g~~~~--~i~~~s-gt~al~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~ 140 (416)
T PRK00011 65 GCEYVDVVEQLAIDRAKELFGAEYA--NVQPHS-GSQANAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNV 140 (416)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce--eeecCC-chHHHHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeE
Confidence 4444555665 89999999999753 366665 578999999888 68899986 44555421 11 11112346788
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----ccC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----QLA 269 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----pld 269 (311)
..++++..++.+|.++|++++++. ++++|.+....+|...|+++|.+ |+++|+++++|++|++ |.. +.+
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~i~~~----~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~-g~~~~g~~~~~ 215 (416)
T PRK00011 141 VSYGVDEETGLIDYDEVEKLALEH----KPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIA-GLVAAGVHPSP 215 (416)
T ss_pred eecCcCcccCCcCHHHHHHHHHhc----CCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchh-cccccCccCCC
Confidence 888886445789999999999752 14677665446888899999976 6999999999999988 754 455
Q ss_pred CCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 270 LALHRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
+. ++|++++|+|||+.| |.|. +++.+
T Consensus 216 ~~--~~di~~~S~~K~l~g-~~gg-~i~~~ 241 (416)
T PRK00011 216 VP--HADVVTTTTHKTLRG-PRGG-LILTN 241 (416)
T ss_pred CC--CCcEEEecCCcCCCC-CCce-EEEeC
Confidence 55 689999999995545 8764 45543
No 51
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.6e-15 Score=151.34 Aligned_cols=162 Identities=12% Similarity=-0.010 Sum_probs=118.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|+. +.|+|++|+ +|+++++.++ +++||+|+ +..+|... .+....++.|+++.+
T Consensus 64 ~r~~~pt~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (437)
T PRK05613 64 SRLTNPTVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTF 138 (437)
T ss_pred eCccChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence 3444555678999999999983 347777776 7887777776 57899987 44565533 233445667999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++ +. .+.+++++.++++ +++|.+.+. .+|.++||++|.+ ||++|+++++|++|+. |.. .+..+++
T Consensus 139 vd-~~----~d~e~l~~~l~~~-----tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~-g~~-~~p~~~G 206 (437)
T PRK05613 139 VE-NP----DDPESWQAAVQPN-----TKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIAT-AAL-VRPLELG 206 (437)
T ss_pred EC-CC----CCHHHHHHhCCcc-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcc-ccc-cChHHhC
Confidence 97 22 1678899999875 455544322 5799999999976 6999999999999998 865 3433578
Q ss_pred CcEEEEccccCcCCCC-CceEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQP-LKITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P-~GiG~L~vr~ 300 (311)
+|++++|+|| ++|++ .|+|++++.+
T Consensus 207 aDivv~S~~K-~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 207 ADVVVASLTK-FYTGNGSGLGGVLIDG 232 (437)
T ss_pred CCEEEeeccc-eecCCCcceeEEEEec
Confidence 9999999999 77733 2568888843
No 52
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.66 E-value=1.3e-15 Score=143.26 Aligned_cols=167 Identities=14% Similarity=0.033 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
..++++++.+|+++|++ + .+++|+|+|+|++.++.++ .++||.|+. ..+|.+. .. .+...|+++++++.+...
T Consensus 59 g~i~~~~~~~A~~~ga~--~-~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s~-~~-~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 59 GPIKEAQELAARAFGAK--H-TFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKSV-IN-GLVLSGAVPVYLKPERNP 132 (294)
T ss_pred hHHHHHHHHHHHHhCCC--C-EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHHH-HH-HHHHCCCEEEEecCccCc
Confidence 34679999999999984 2 3555999999999998887 578999874 4455432 22 233458888888765322
Q ss_pred -----cccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccC----ccCcccCCCCC
Q 021539 205 -----LRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLV----FGEDQLALALH 273 (311)
Q Consensus 205 -----g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv----~G~~pldl~~l 273 (311)
+.++.+++++.+++.. .+++|.++.. .+|+++|+++|.+ ||++|+++++|++|+. .+..+.+....
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~---~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHP---DAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCC---CceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 3689999999997532 2466666533 6899999999966 6999999999999974 13345555567
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++|+++.|+|| ++++|.+.|+|+++++.
T Consensus 210 ~~div~~S~hK-~l~g~~~~~~l~~~~~~ 237 (294)
T cd00615 210 GADIVVQSTHK-TLPALTQGSMIHVKGDL 237 (294)
T ss_pred CCcEEEEchhc-ccchHhHHHHHHhCCCc
Confidence 89999999999 56558888999888763
No 53
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.64 E-value=1.7e-14 Score=136.63 Aligned_cols=159 Identities=9% Similarity=-0.029 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
..++.|+.+++++|++ + ++||+|+|+|++.++.++.+.+|++|++ ..+|++. . ..+...|+++..++++..++
T Consensus 19 ~~~~~~~~la~~~~~~--~--~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 19 KVREFEKAFAEYLGVK--Y--AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT-A-NAILLLGATPVFVDIDPDTY 92 (352)
T ss_pred HHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH-H-HHHHHcCCeEEEEecCCCcC
Confidence 4568999999999972 3 8999999999999999887678998864 4455532 2 22345699999999875457
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC-CCCCcEEEEccc
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA-LHRPDLVLCTLD 283 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~-~l~~Dfl~~S~H 283 (311)
.++.++|++.++++ +++|.+++ .+|...|+++|.+ |+++|+++++|++|++ |....+.. ....|+.++|+|
T Consensus 93 ~~d~~~l~~~i~~~-----~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~-g~~~~~~~~~~~~d~~~~S~~ 165 (352)
T cd00616 93 NIDPELIEAAITPR-----TKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQAL-GATYKGRKVGTFGDAGAFSFH 165 (352)
T ss_pred CcCHHHHHHhcCcC-----CeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCC-CCeECCEEcccCcceeEEcCC
Confidence 78999999988654 56776654 4899999999966 6999999999999999 87654321 112688998866
Q ss_pred --cCcCCCCCceEEEEEeC
Q 021539 284 --NNTHAQPLKITCLLVRR 300 (311)
Q Consensus 284 --K~l~G~P~GiG~L~vr~ 300 (311)
| +++.|. .|+++.++
T Consensus 166 ~~K-~~~~~~-gg~~~~~~ 182 (352)
T cd00616 166 PTK-NLTTGE-GGAVVTND 182 (352)
T ss_pred CCC-CCcccC-ceEEEECC
Confidence 9 555343 35555543
No 54
>PLN02452 phosphoserine transaminase
Probab=99.64 E-value=1e-15 Score=149.48 Aligned_cols=169 Identities=11% Similarity=0.024 Sum_probs=125.5
Q ss_pred CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEE
Q 021539 118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKV 195 (311)
Q Consensus 118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V 195 (311)
++........++++|+.+.++++++ ++|.|+|. .|+|.++..+..++- .+|++++ ...+..+..+...+++.|...
T Consensus 44 sHRs~~f~~i~~~~~~~L~~l~~~p-~~y~v~~l~Gsgt~~~ea~~~nl~-~~~~~~l~~~~G~fg~r~~~~a~~~g~~~ 121 (365)
T PLN02452 44 SHRGKEFLSIIQKAEADLRELLDIP-DNYEVLFLQGGASTQFAAIPLNLC-KPGDKADFVVTGSWSKKAAKEAKKYCKTN 121 (365)
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEeCccHHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCCc
Confidence 4456666778899999999999984 66888877 799999999998873 4677653 445555665656677777644
Q ss_pred EEEeCCCCCc---ccCHHHHHhhhhccCCCCCceEEEEecc--cccch-hcHHHHHHHHHCCcEEEecccccCccCcccC
Q 021539 196 IAAPETWLDL---RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR-YSMHWISEAHRNAWHVLLDATGLVFGEDQLA 269 (311)
Q Consensus 196 ~~vp~~~~~g---~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i-~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld 269 (311)
+.....+ .. ..+.+++ +.+. ....|.++++ ++|+. .|+.++. +++++|||+|++ |+.|+|
T Consensus 122 ~~~~~~~-~~~~~~~~~~~~----~~~~---~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~-g~~pid 187 (365)
T PLN02452 122 VIASGKD-EKYTKIPSVSEW----ELTP---DAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNF-LSKPVD 187 (365)
T ss_pred EEEecCC-CCCCCCCChHHc----CCCC---CCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCccc-cCcccC
Confidence 4432222 22 3445443 2111 2467888887 58995 8887774 389999999999 999999
Q ss_pred CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539 270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
++++++|| +|+|| ++| |.|+|++++|+++++..
T Consensus 188 v~~~~v~~--~saqK-~lG-P~Gl~~v~vr~~~l~~~ 220 (365)
T PLN02452 188 VSKYGVIY--AGAQK-NVG-PSGVTIVIIRKDLIGNA 220 (365)
T ss_pred HHHcCEEE--Eeccc-ccC-CCCeEEEEEcHHHHhhc
Confidence 99999888 69999 889 99999999999887653
No 55
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.64 E-value=6.6e-15 Score=143.87 Aligned_cols=156 Identities=13% Similarity=0.023 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~ 203 (311)
..++.++.+|+++|++ . ++++++++.|+++++. + +++||+|++ ...|... .+..++++.|+++.+++..
T Consensus 48 ~~~~le~~la~l~g~~--~--~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 48 TRTALESLLAKLDKAD--R--AFAFSSGMAALDVITR-L-LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred HHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHH-H-hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 3568899999999983 2 4455555679998776 3 578999874 4455422 2445566789999988763
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
+.+++++.++++ +++|.+... .+|.+.|+++|.+ ||++|+++++|++|+. +.....+ .+++|++++
T Consensus 120 ----d~~~le~~i~~~-----tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~-~~~~~~l-~~g~Di~v~ 188 (378)
T TIGR01329 120 ----DLDKVKAALGPK-----TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS-PLLCNPL-ELGADIVYH 188 (378)
T ss_pred ----CHHHHHHhcCcC-----ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcCCcEEEE
Confidence 578888888754 567776544 5999999999966 6999999999999988 7665555 458999999
Q ss_pred ccccCcCCCCCc--eEEEEEeCCC
Q 021539 281 TLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 281 S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
|+|||+.| |.| .|+++++++.
T Consensus 189 S~tK~l~G-~~~~~~G~v~~~~~~ 211 (378)
T TIGR01329 189 SATKFLAG-HSDVMAGVLAVKGEE 211 (378)
T ss_pred ecceeccC-CccceeEEEEeCcHH
Confidence 99995555 877 8888887643
No 56
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.64 E-value=3.1e-15 Score=150.56 Aligned_cols=168 Identities=13% Similarity=0.019 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH--HHhcCCCCCCC----EEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLM--IGESYPFFKGN----YYL-TIISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnl--v~~s~~~~~Gd----~Il-s~~eh~~~~~~~la~~~G~~V~~v 198 (311)
..+++.++.+++++|++.. .+.-++|+++.+.. +++.+...+|+ +|+ +..+|+... ..++..|++++.+
T Consensus 113 el~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNP--ASAAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHH--HHHHHcCCEEEEe
Confidence 4457899999999999621 23223444444332 23333334454 665 556665432 2345579999999
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch-hcHHHHHH-HHHCCcEEEecccccCccCc-ccCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR-YSMHWISE-AHRNAWHVLLDATGLVFGED-QLALALHR 274 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i-~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pldl~~l~ 274 (311)
|.+. ++.+|.++|+++++++ +++|.++.- .+|.+ .|+++|.+ ||++|++++||++|++ +.. .++..+++
T Consensus 189 ~~~~-~~~~D~e~L~~~i~~~-----t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~-~~~g~~~~~~~G 261 (481)
T PRK04366 189 PSNE-DGLVDLEALKAAVGED-----TAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLN-AILGKARPGDMG 261 (481)
T ss_pred ecCC-CCCcCHHHHHhhcccC-----CeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChh-hhcccCCccccC
Confidence 9875 6889999999998765 456555433 68987 68999966 6999999999999997 633 46778899
Q ss_pred CcEEEEccccCcCCCC-----CceEEEEEeCCCCcc
Q 021539 275 PDLVLCTLDNNTHAQP-----LKITCLLVRRKSFDT 305 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P-----~GiG~L~vr~~~~~~ 305 (311)
+|++++++|| ++|.| .|+|+|+++++..+.
T Consensus 262 aD~~~~~~hK-~l~~P~g~Ggp~~G~l~~~~~~~~~ 296 (481)
T PRK04366 262 FDVVHLNLHK-TFSTPHGGGGPGSGPVGVKEELAPF 296 (481)
T ss_pred CCEEEEechh-hcCCCCCCCCCCeeeeeehhhhHhh
Confidence 9999999999 55435 467899999876654
No 57
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=4.5e-15 Score=146.47 Aligned_cols=162 Identities=9% Similarity=0.013 Sum_probs=124.0
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~ 197 (311)
+|....-.+...++||++-|+. . .++++|++.|++.++.++ +++||+|++. ..|.. ..++..+++.|++|.+
T Consensus 57 sR~~nPt~~~le~~la~LEg~~--~--a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~ 131 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEGGA--G--CALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTW 131 (395)
T ss_pred cCCCChhHHHHHHHHHHHhCCC--e--EEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 4444444556777799998873 2 667777999999988887 6899998754 34431 2233445678999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~ 272 (311)
++.. +.++++++++++ ++||.+.+. .+|.+.||++|++ ||++ |++++||++|+. |.. ++..+
T Consensus 132 vd~~------d~~~l~~~l~~~-----TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~-p~~-~~pl~ 198 (395)
T PRK08114 132 FDPL------IGADIAKLIQPN-----TKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAA-GVL-FKALD 198 (395)
T ss_pred ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcc-ccc-cCHHH
Confidence 8642 457888998765 688888655 5899999999976 6887 599999999999 977 99999
Q ss_pred CCCcEEEEccccCcCCCCC--ceEEEEEeCC
Q 021539 273 HRPDLVLCTLDNNTHAQPL--KITCLLVRRK 301 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~--GiG~L~vr~~ 301 (311)
+++||++.|+|||+.| |. +.|+++.+++
T Consensus 199 ~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~ 228 (395)
T PRK08114 199 FGIDISIQAGTKYLVG-HSDAMIGTAVANAR 228 (395)
T ss_pred cCCcEEEEcCcccccC-CCcceeEEEEcCHH
Confidence 9999999999996666 85 7787776654
No 58
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=6.9e-15 Score=149.80 Aligned_cols=168 Identities=12% Similarity=0.048 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHcCCCCCCC--eEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHH-------HHHHhCCcEEE
Q 021539 127 PEIQARNRALKHCGLSEDEY--LVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIK-------GFAAQKESKVI 196 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey--~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~-------~la~~~G~~V~ 196 (311)
.+.-|.+++.++||++.+++ +|-- -+++.|+..+..++ +++||.|++ ..+|-.+... ..+...|..+.
T Consensus 195 iE~la~era~~lF~~~~~~~gaNVQp-~SGs~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~ 272 (586)
T PLN02271 195 IERLCCERALAAFGLDSEKWGVNVQP-YSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFE 272 (586)
T ss_pred HHHHHHHHHHHHhCCcccccccceee-ccHHHHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEE
Confidence 33479999999999876432 2332 37888999999888 799999985 4443322111 11233466666
Q ss_pred EEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--
Q 021539 197 AAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA-- 271 (311)
Q Consensus 197 ~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~-- 271 (311)
.+| ++..+|.||.++|++..... +++||.+.+...=...|+++|.+ |+++|+++++|++|.+ |.+..++-
T Consensus 273 ~vpY~~d~~~g~IDyd~lek~a~~~----rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~a-GLIa~g~~~s 347 (586)
T PLN02271 273 SLPYKVNPQTGYIDYDKLEEKALDF----RPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHIS-GLVAAKECVN 347 (586)
T ss_pred EEEcccccccCccCHHHHHHHhhhc----CCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccc-cccccCcCCC
Confidence 666 65557899999999844332 26798887664347889999977 6999999999999999 99977743
Q ss_pred -CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 272 -LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 272 -~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
...+|++++|+|||+.| |.| |++++|++..
T Consensus 348 P~~~aDvvt~TTHKtLrG-PrG-G~I~~r~~~~ 378 (586)
T PLN02271 348 PFDYCDIVTSTTHKSLRG-PRG-GIIFYRKGPK 378 (586)
T ss_pred CCcCCcEEEeCCcccCCC-CCc-eEEEeccccc
Confidence 23689999999997777 999 8888887643
No 59
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=1.6e-14 Score=140.77 Aligned_cols=175 Identities=11% Similarity=0.033 Sum_probs=129.0
Q ss_pred cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHH
Q 021539 105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDY 183 (311)
Q Consensus 105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~ 183 (311)
+-..+.+.+.....+.|.. ..+.++++|+++|++ . +++|+|+|+|+++++.++.+.+||+|++ ...|...
T Consensus 16 e~~~~~~~l~~~~~~~g~~----~~~le~~la~~~g~~--~--~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~- 86 (379)
T PRK11658 16 ELAAVKEVLRSGWITTGPK----NQALEQAFCQLTGNQ--H--AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST- 86 (379)
T ss_pred HHHHHHHHHHcCCccCCHh----HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH-
Confidence 4455666664433333443 458899999999984 3 8899999999999999987789999874 4444432
Q ss_pred HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539 184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLV 262 (311)
Q Consensus 184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv 262 (311)
. ..+...|++++.++++..+..+|.++++++++++ +++|...+ .+|...|+++|.+ |+++|+++++|++|++
T Consensus 87 ~-~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~-----tkav~~~~-~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~ 159 (379)
T PRK11658 87 L-NMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPR-----TKAIIPVH-YAGAPADLDAIRAIGERYGIPVIEDAAHAV 159 (379)
T ss_pred H-HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccC-----CeEEEEeC-CCCCcCCHHHHHHHHHHcCCeEEEECCCcc
Confidence 1 2334569999999987645568999999999765 45665333 5999999999966 6999999999999999
Q ss_pred ccCccc--CCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 263 FGEDQL--ALALHRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 263 ~G~~pl--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
|.... ++...+.|+++|+.+| .+.+ |-|++++.
T Consensus 160 -g~~~~~~~~g~~g~~~~Sf~~~K-~l~~--g~GG~v~~ 194 (379)
T PRK11658 160 -GTYYKGRHIGARGTAIFSFHAIK-NITC--AEGGLVVT 194 (379)
T ss_pred -CCeECCeecCCCCCEEEeCCCCC-cCcc--cCceEEEE
Confidence 87654 3666778999999999 4432 45555554
No 60
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.63 E-value=4.5e-15 Score=143.99 Aligned_cols=167 Identities=16% Similarity=-0.019 Sum_probs=117.2
Q ss_pred hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--H-HHHHHhCCcEE
Q 021539 121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--I-KGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~-~~la~~~G~~V 195 (311)
|......+++ +|+.+++++|++.. .|++| |+|+|+++++.++ +++||+|+ ...+|.... + ...++..|.++
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~-sgt~a~~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~ 134 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYA--NVQPH-SGSQANLAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLF 134 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCce--eeecC-CcHHHHHHHHHHh-cCCCCEEEEecCccCccccccccccccccceeE
Confidence 4444455555 78899999999643 35556 4689999999988 68999986 444544221 1 11134458877
Q ss_pred EEEeCCCC--CcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----c
Q 021539 196 IAAPETWL--DLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----Q 267 (311)
Q Consensus 196 ~~vp~~~~--~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----p 267 (311)
..++++.+ ++.+|.+++++.++.. +++++.+....+|+..|+++|.+ ||++|+++++|++|+. |.. +
T Consensus 135 ~~~~~~~~~~~~~id~~~l~~~i~~~----~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~-g~~~~g~~~ 209 (402)
T cd00378 135 ESVPYGVDPETGLIDYDALEKMALEF----KPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVA-GLVAGGVFP 209 (402)
T ss_pred EEecCCcCcccCCcCHHHHHHHHHhC----CCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchh-hhhhcccCC
Confidence 77776543 5789999999988642 14566655446899999999976 6999999999999987 753 3
Q ss_pred cCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
.++. ++|++++|+|||+.| |.|.++++.+
T Consensus 210 ~~~~--~~dv~~~s~sK~l~G-~~gg~i~~~~ 238 (402)
T cd00378 210 NPLP--GADVVTTTTHKTLRG-PRGGLILTRK 238 (402)
T ss_pred Cccc--CCcEEEeccccCCCC-CCceEEEecc
Confidence 4444 689999999995435 8765554433
No 61
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.62 E-value=1.1e-14 Score=140.97 Aligned_cols=165 Identities=12% Similarity=-0.013 Sum_probs=112.8
Q ss_pred chhh----hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcE
Q 021539 120 KGNF----ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESK 194 (311)
Q Consensus 120 ~G~~----~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~ 194 (311)
.|++ .....+++|+++|+++|++ + .++||+|++. +..++..+ .++|+.|++ ..+|. ..+..+....+..
T Consensus 46 ~gs~~~~g~~~~~~~~e~~la~~~~~~-~--~l~~~sG~~a-~~~~~~~~-~~~~d~ii~d~~~H~-sv~~~~~~~~~~~ 119 (370)
T PRK05937 46 GGSRAILGPSSLLDDLEHKIAHFHGAP-E--AFIVPSGYMA-NLGLCAHL-SSVTDYVLWDEQVHI-SVVYSLSVISGWH 119 (370)
T ss_pred CCcCcccCChHHHHHHHHHHHHHhCCC-e--EEEECChHHH-HHHHHHHh-CCCCCEEEEEhhhhH-HHHHHHHHcCCce
Confidence 3666 6677899999999999994 2 3888888854 33333333 246778775 55554 3333222222444
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL 270 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl 270 (311)
+.+ + ..|.++|++.++...+. ..+.+|+++++ .+|.++|+++|.+ |+++|++++||++|++ |+.+.+.
T Consensus 120 ~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~-G~~g~~g 191 (370)
T PRK05937 120 QSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAM-GIFGDDG 191 (370)
T ss_pred EEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCC
Confidence 332 2 24678888888742110 12457766655 5999999999966 6999999999999999 9988886
Q ss_pred C----CCC---CcEEEEccccCcCCCCCceEEEEEeC
Q 021539 271 A----LHR---PDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 271 ~----~l~---~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
. .++ .|.+.+|++| .+| |.|.|+|+.++
T Consensus 192 ~g~~~~~~~~~~~~~~~tlsK-~~g-~~G~~vl~~~~ 226 (370)
T PRK05937 192 KGFCHSLGYENFYAVLVTYSK-ALG-SMGAALLSSSE 226 (370)
T ss_pred CchHHhhCCCCCcEEEEechh-hhh-cCceEEEcCHH
Confidence 3 222 2356788889 999 89999998754
No 62
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.62 E-value=1.5e-14 Score=145.10 Aligned_cols=162 Identities=15% Similarity=0.119 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC----hHHHHHHHHhCCcEEEEEeC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE----SDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~----~~~~~~la~~~G~~V~~vp~ 200 (311)
...+.+++.+++++|+.. .++++|++.|+++++.+ +.+|++|+... +|. +..+....+..|+++..++.
T Consensus 122 ~r~~~le~~lA~l~gae~----alvv~sg~aAi~l~l~~--l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~ 195 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAED----ALVVNNNAAAVLLALNT--LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT 195 (454)
T ss_pred hHHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHH--hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC
Confidence 346789999999999952 34567778899988865 46899987544 432 22233345667999988876
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--c--cc--chhcHHHHHH-HHHCCcEEEecccc---------cCcc
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V--NG--TRYSMHWISE-AHRNAWHVLLDATG---------LVFG 264 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~--tG--~i~Pi~~I~~-a~~~g~~vlvDAaQ---------sv~G 264 (311)
+ ...+.++++++++++ |++|.+.+. . .| .+.|+++|.+ ||++|+++++|++. .+ +
T Consensus 196 ~---~~~~l~dle~aI~~~-----T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl-~ 266 (454)
T TIGR00474 196 T---NRTHLKDYEDAITEN-----TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGL-P 266 (454)
T ss_pred C---CCCCHHHHHHhcCcC-----CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccC-C
Confidence 4 234788899999865 567666554 2 57 4899999966 79999999999872 33 3
Q ss_pred Cccc--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 265 EDQL--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 265 ~~pl--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+.|. ++.++++|+++||+|| ++|+| ..|+++.+++.++
T Consensus 267 ~~p~~~~~~~~GaDiv~fSg~K-~LgGp-~~G~i~g~~~~i~ 306 (454)
T TIGR00474 267 DEPTVQEVIAAGVDLVTFSGDK-LLGGP-QAGIIVGKKELIE 306 (454)
T ss_pred CCcccccHhHcCCCEEEecCcc-ccCCC-eEEEEEECHHHHH
Confidence 4443 5556899999999999 66558 4899999987654
No 63
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.61 E-value=2.3e-14 Score=138.96 Aligned_cols=152 Identities=13% Similarity=0.036 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
.++.|+.+|+++|++ + .++++|+|+|+++++.++.+++||.|++ ..++.. ....+...|+++++++++..++.
T Consensus 31 ~~~le~~la~~~g~~---~-~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~~ 104 (380)
T TIGR03588 31 VPAFEEALAEYVGAK---Y-AVAFNSATSALHIACLALGVGPGDRVWTTPITFVA--TANCALYCGAKVDFVDIDPDTGN 104 (380)
T ss_pred HHHHHHHHHHHHCCC---e-EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH--HHHHHHHcCCEEEEEecCCCcCC
Confidence 457899999999984 2 4555689999999999987789999864 444432 12334567999999998654667
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC----cEEEEc
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP----DLVLCT 281 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~----Dfl~~S 281 (311)
++.+++++.+++. +..++++|.+.+ .+|...|+++|.+ |+++|+++++|++|++ |.. ++...++. |+.++|
T Consensus 105 ~d~~~l~~~i~~~-~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~-g~~-~~~~~~g~~~~~d~~~~S 180 (380)
T TIGR03588 105 IDEDALEKKLAAA-KGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHAL-GAE-YGGKPVGNCRYADATVFS 180 (380)
T ss_pred cCHHHHHHHhhcc-cCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcc-cCc-cCCEeCCCccccceEEEe
Confidence 8999999999731 001246665544 4899999999966 6999999999999999 975 66666666 999999
Q ss_pred cc--cCcCCCC
Q 021539 282 LD--NNTHAQP 290 (311)
Q Consensus 282 ~H--K~l~G~P 290 (311)
+| | +++.|
T Consensus 181 ~~~~K-~~~~~ 190 (380)
T TIGR03588 181 FHPVK-IITTA 190 (380)
T ss_pred cCCCC-ccccc
Confidence 99 8 55534
No 64
>PRK04311 selenocysteine synthase; Provisional
Probab=99.60 E-value=1.9e-14 Score=144.64 Aligned_cols=162 Identities=14% Similarity=0.112 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcC----hHHHHHHHHhCCcEEEEEeC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEE----SDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~----~~~~~~la~~~G~~V~~vp~ 200 (311)
...+.+++.+|+++|+. . .++++|+|.|+++++.++ .+|++|+.. .+|. +..+....++.|+++.+++.
T Consensus 127 ~r~~~~e~~lA~l~Gae--~--a~vv~sgtaAl~l~l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~ 200 (464)
T PRK04311 127 SRDRALAALLCALTGAE--D--ALVVNNNAAAVLLALNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT 200 (464)
T ss_pred hHHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC
Confidence 44678999999999984 2 677888889999988765 688988644 3443 12233345667999988876
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEeccc----cc--chhcHHHHHH-HHHCCcEEEecccccCc--------cC
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVV----NG--TRYSMHWISE-AHRNAWHVLLDATGLVF--------GE 265 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~----tG--~i~Pi~~I~~-a~~~g~~vlvDAaQsv~--------G~ 265 (311)
+ ...+.++++++++++ |++|.+.+.+ +| ...|+++|.+ ||++|+++++|+++.+. ++
T Consensus 201 ~---~~t~~~dle~aI~~~-----TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~ 272 (464)
T PRK04311 201 T---NRTHLRDYEQAINEN-----TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD 272 (464)
T ss_pred C---CCCCHHHHHHhcCcc-----CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence 4 235788899999865 5677665542 45 5689999966 79999999999954221 22
Q ss_pred cccCCC---CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 266 DQLALA---LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 266 ~pldl~---~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
.| ++. ++++|+++||+|| ++|+| ..|+++.+++.++
T Consensus 273 ~p-~~~~~l~~GaDiv~fSg~K-~LgGp-~~G~i~g~~~li~ 311 (464)
T PRK04311 273 EP-TVQELLAAGVDLVTFSGDK-LLGGP-QAGIIVGKKELIA 311 (464)
T ss_pred CC-chhhHHhcCCcEEEecCcc-cccCC-ceEEEEEcHHHHH
Confidence 33 333 3799999999999 66658 5899999987654
No 65
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.59 E-value=4.2e-14 Score=142.57 Aligned_cols=174 Identities=12% Similarity=-0.010 Sum_probs=120.5
Q ss_pred chhhhhHHHH-HHHHHHHHHcCCCCCCCeEEE---eCCHHHHHHHHHhcCCCCCCCEEEE-cc---CcChHHH-HHHH--
Q 021539 120 KGNFISIPEI-QARNRALKHCGLSEDEYLVLF---VPNYKEAMLMIGESYPFFKGNYYLT-II---SEESDYI-KGFA-- 188 (311)
Q Consensus 120 ~G~~~~~~le-~aR~~IA~~Lga~~dey~VvF---TsnaTealnlv~~s~~~~~Gd~Ils-~~---eh~~~~~-~~la-- 188 (311)
.|......+| -++++.+++|++..+. +.| ..+++.|+..+..++ +++||.|++ .. +|.+... ..-.
T Consensus 73 ~G~~~~d~lE~~~~~~~~~~f~~~~~~--~~~nv~~~SG~~AN~av~~aL-~~pgD~Il~~d~~~gGhl~H~~~~~g~~~ 149 (475)
T PLN03226 73 GGNEYIDQIETLCQKRALEAFRLDPEK--WGVNVQPLSGSPANFAVYTAL-LQPHDRIMGLDLPHGGHLSHGYQTDGKKI 149 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCCcce--eEEecCcCchHHHHHHHHHHh-CCCCCEEEECCCCcCcchhhhhhhccccc
Confidence 3555555555 5899999999997554 545 357777888888887 579999986 22 2222221 1100
Q ss_pred HhCCcEEEEEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccC
Q 021539 189 AQKESKVIAAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE 265 (311)
Q Consensus 189 ~~~G~~V~~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~ 265 (311)
...+..+..++ .+..++.+|.++|++.+... +++++.+....+|...|+++|.+ |+++|+++++|++|++ |.
T Consensus 150 s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~----~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~-Gl 224 (475)
T PLN03226 150 SATSIYFESMPYRLDESTGLIDYDKLEKKAMLF----RPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHIS-GL 224 (475)
T ss_pred ccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc----CCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhh-Cc
Confidence 11122223333 34447899999999988742 13465543335899999999976 6999999999999999 99
Q ss_pred cccCCCC---CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 266 DQLALAL---HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 266 ~pldl~~---l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
...++.. ..+||+++++|||+.| |.| |+++.+++..
T Consensus 225 i~~~~~~~p~~~~Div~~t~hK~L~G-P~G-g~I~~~~~~~ 263 (475)
T PLN03226 225 VAAQEAASPFEYCDVVTTTTHKSLRG-PRG-GMIFFRKGPK 263 (475)
T ss_pred ccCCCCCCCCCCCeEEEecCcccccC-CCc-eEEEEchhhc
Confidence 9877543 2699999999995557 999 8888887644
No 66
>PLN02880 tyrosine decarboxylase
Probab=99.58 E-value=4.9e-14 Score=142.51 Aligned_cols=192 Identities=11% Similarity=-0.054 Sum_probs=126.3
Q ss_pred cchhHHHHhc---CCC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCCC-----CeEEEeCCHHHHHHHHHhcC--------
Q 021539 105 EPSRLLDILS---KKT--SFK-GNFISIPEIQARNRALKHCGLSEDE-----YLVLFVPNYKEAMLMIGESY-------- 165 (311)
Q Consensus 105 ~~~~l~~~l~---~~s--s~~-G~~~~~~le~aR~~IA~~Lga~~de-----y~VvFTsnaTealnlv~~s~-------- 165 (311)
.++-+-|++. |.. ++. +..++..+.++-+-+++++|.+.+. ..-+||+|+|+|+.+.+..-
T Consensus 95 ~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~ 174 (490)
T PLN02880 95 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKV 174 (490)
T ss_pred HHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHh
Confidence 4455666663 222 332 4445566678999999999997531 13689999999975533211
Q ss_pred CCCC-CCEE-E-EccCcChHHHHHHHHhCCc---EEEEEeCCC-CCcccCHHHHHhhhhccCCCC-CceEEEEecc--cc
Q 021539 166 PFFK-GNYY-L-TIISEESDYIKGFAAQKES---KVIAAPETW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPVV--VN 235 (311)
Q Consensus 166 ~~~~-Gd~I-l-s~~eh~~~~~~~la~~~G~---~V~~vp~~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~~--~t 235 (311)
.+.. ..-+ + |...|. ++...+.-.|. .|+.||++. .+++++.+.|++.+++..+.. ..-+|+.++- .+
T Consensus 175 g~~~~~~~vv~~S~~aH~--Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~ 252 (490)
T PLN02880 175 GKNALEKLVVYASDQTHS--ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS 252 (490)
T ss_pred cccccCCeEEEEcCCchH--HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence 1110 1223 3 333333 24344444566 478899874 256899999999997532111 1223333332 59
Q ss_pred cchhcHHHHHH-HHHCCcEEEecccccCccCccc-----CCCC-CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 236 GTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL-----ALAL-HRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 236 G~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl-----dl~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
|.+-|+++|++ |+++|+++|||||++. +.... .+.. .++|++++++|||++. |.|+|+|++|+
T Consensus 253 GaiDpl~eI~~i~~~~~iwlHVDaA~gg-~~~~~~~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llvr~ 322 (490)
T PLN02880 253 TAVDPLLELGKIAKSNGMWFHVDAAYAG-SACICPEYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWVKD 322 (490)
T ss_pred cccCcHHHHHHHHHHcCCEEEEehhhHH-HHHhCHHHHHHhcCchhcCEEEECchhhcCC-CccEEEEEEeC
Confidence 99999999976 6999999999999998 75543 2444 4799999999995555 99999999995
No 67
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.58 E-value=2e-14 Score=155.01 Aligned_cols=180 Identities=16% Similarity=0.103 Sum_probs=132.4
Q ss_pred chhHHHHhcCC---CCcchhhh------hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC--CEEE
Q 021539 106 PSRLLDILSKK---TSFKGNFI------SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG--NYYL 174 (311)
Q Consensus 106 ~~~l~~~l~~~---ss~~G~~~------~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G--d~Il 174 (311)
+.-+..++.++ ++|+..+. .+.+.+.|..|++++|+++++ +.|+.|+|++.+.++.++.+.+| ++|+
T Consensus 119 ~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~an--aSL~d~aTAaaea~~~a~~~~~g~~~~Vl 196 (993)
T PLN02414 119 PVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSN--ASLLDEGTAAAEAMAMCNNILKGKKKKFL 196 (993)
T ss_pred HHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhh--EeecCChHHHHHHHHHHHhcccCCCCEEE
Confidence 33335555555 56654442 233579999999999998776 99999999999999888877754 6675
Q ss_pred -EccCcChH--HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HH
Q 021539 175 -TIISEESD--YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AH 248 (311)
Q Consensus 175 -s~~eh~~~--~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~ 248 (311)
+..+|+.+ .++..++..|++|+.+|.+..+ ...+. +. .++.+. .+|.+.|+++|.+ ||
T Consensus 197 Vs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----------~~~~~-----v~-~vlvq~P~~~G~v~dv~~I~~~ah 260 (993)
T PLN02414 197 IASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----------YSSGD-----VC-GVLVQYPATDGEVLDYAEFVKNAH 260 (993)
T ss_pred EcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----------cccCc-----eE-EEEEecCCCCeEEcCHHHHHHHHH
Confidence 66677743 4677778889999999874211 01111 11 112223 5999999999965 79
Q ss_pred HCCcEEEecccccCccCccc-CCCCCCCcEEEEccccCcC-----CCCCceEEEEEeCCCCcccCC
Q 021539 249 RNAWHVLLDATGLVFGEDQL-ALALHRPDLVLCTLDNNTH-----AQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 249 ~~g~~vlvDAaQsv~G~~pl-dl~~l~~Dfl~~S~HK~l~-----G~P~GiG~L~vr~~~~~~~~p 308 (311)
++|++++| |+|++ +..++ +..++++||+++++|| |. |+|. +|+||+|++.... .|
T Consensus 261 ~~GaL~iV-aad~l-al~~l~~pge~GADi~vgsgqK-wg~P~G~GGP~-aGflavr~~~~r~-~P 321 (993)
T PLN02414 261 ANGVKVVM-ATDLL-ALTMLKPPGEWGADIVVGSAQR-FGVPMGYGGPH-AAFLATSQEYKRL-MP 321 (993)
T ss_pred HcCCEEEE-EECHH-HhcCCCCHhhccCcEEEECCCc-cccCCCCCCCC-eeEEEECHHHHhh-CC
Confidence 99999999 99999 99999 5999999999999999 54 4453 9999999987553 55
No 68
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.58 E-value=1.7e-14 Score=155.51 Aligned_cols=156 Identities=12% Similarity=0.010 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC--CEEE-EccCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG--NYYL-TIISEESD--YIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G--d~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~~ 202 (311)
+.+.|.-+++++|++..+ +.|+.|+|++.+.++.++.++++ ++|+ +..+|+.+ .|+..++..|++|+.+|.+.
T Consensus 123 l~~~Qt~la~LtG~~~an--aSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~ 200 (954)
T PRK05367 123 LLNFQTMVADLTGLEIAN--ASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK 200 (954)
T ss_pred HHHHHHHHHHHHCCChhh--ccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc
Confidence 458999999999998765 99999999999999888888764 7775 66677743 46677788899999998753
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL 279 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~ 279 (311)
+. + .++ +..+ +.+. .+|.+.|+++|.+ +|++|++++|||.|.. .....+..++++||++
T Consensus 201 -d~--~--------~~~-----~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~A-l~~l~~pge~GaDi~v 262 (954)
T PRK05367 201 -AL--D--------HDD-----VFGV-LLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLA-LTLLTPPGEMGADIAV 262 (954)
T ss_pred -CC--C--------ccc-----EEEE-EEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhh-ccCCCChhhcCCCEEE
Confidence 21 1 111 2222 2233 6999999999965 7999999999998855 4455578999999999
Q ss_pred EccccCc-----CCCCCceEEEEEeCCCCcc
Q 021539 280 CTLDNNT-----HAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 280 ~S~HK~l-----~G~P~GiG~L~vr~~~~~~ 305 (311)
+|+|| | ||+| |+|+|++|++....
T Consensus 263 gs~qk-fg~P~g~GGP-~aGflavr~~~~r~ 291 (954)
T PRK05367 263 GSAQR-FGVPMGFGGP-HAAYFAVRDAYKRS 291 (954)
T ss_pred eeCcc-cCCCCCCCCC-CEEEEEECHHHHhh
Confidence 99999 6 6768 89999999876655
No 69
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.56 E-value=7e-14 Score=132.66 Aligned_cols=191 Identities=8% Similarity=0.041 Sum_probs=150.4
Q ss_pred cchhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH
Q 021539 105 EPSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD 182 (311)
Q Consensus 105 ~~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~ 182 (311)
.+.++.+.+.+++ .+.-...-+..++.++-+-..|.... .+..+|..++|-|+..++-.+ +.+||.+++ ..+--+.
T Consensus 28 l~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~G~wg~ 105 (385)
T KOG2862|consen 28 LSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVSTGTWGQ 105 (385)
T ss_pred CCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEechHHH
Confidence 4446777776654 44445555667889999999898764 367888888899998877766 468999863 3332234
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHH-HH-HHHCCcEEEecc
Q 021539 183 YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWI-SE-AHRNAWHVLLDA 258 (311)
Q Consensus 183 ~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I-~~-a~~~g~~vlvDA 258 (311)
.+...+++.|++|..++.++ +.-+.++.+.+.|..+ +.++|+++|. +||+.||+.++ .+ ||+++++++||+
T Consensus 106 ra~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh----~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~ 180 (385)
T KOG2862|consen 106 RAADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQH----KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDT 180 (385)
T ss_pred HHHHHHHhhCceeeEEecCc-ccCccHHHHHHHHHhc----CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEec
Confidence 44556788899999999887 6778999999999875 3578888877 69999997665 55 699999999999
Q ss_pred cccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 259 TGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 259 aQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+.++ |-.++-++++++|+..-..+| -+|+|.|++.+-..++..+
T Consensus 181 VaSl-ggt~F~mDewgVDvaytgSQK-aL~aP~GLsiisfS~ka~~ 224 (385)
T KOG2862|consen 181 VASL-GGTEFEMDEWGVDVAYTGSQK-ALGAPAGLSIISFSDKALE 224 (385)
T ss_pred hhhc-CCccceehhhcccEEEecchh-hcCCCCCcceeecCHHHHH
Confidence 9999 999999999999999999999 7777999999877765543
No 70
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=1.2e-13 Score=137.87 Aligned_cols=159 Identities=12% Similarity=-0.010 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~ 201 (311)
....++.++++|++.|+. . .+++++++.|+..++.++ .++||+|+ +...|.. ..+...+.+.|+++.+++ +
T Consensus 68 ~p~~~~Le~~lA~l~g~~--~--av~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV--A--ALLLASGQAAETFAILNL-AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred CchHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 344567889999999984 2 677888899999888877 57899986 4444442 122333455788888885 2
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV 278 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl 278 (311)
. .+.+.++++++++ +++|.+.+. .+|.+.|+++|.+ ||++|+.++||++|+. |...-.+ ++++|++
T Consensus 142 ~----~d~e~l~~ai~~~-----tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~-~~~~~pl-~~GaDiv 210 (436)
T PRK07812 142 P----DDLDAWRAAVRPN-----TKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIAT-PYLIRPL-EHGADIV 210 (436)
T ss_pred C----CCHHHHHHhCCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcCCCEE
Confidence 2 2678888888764 567776554 5899999999976 6999999999999998 7665555 4799999
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+.|+|| ++|++ | +|++++..+.
T Consensus 211 v~S~tK-~lgg~-G~~i~G~vv~~~~ 234 (436)
T PRK07812 211 VHSATK-YLGGH-GTAIAGVIVDGGT 234 (436)
T ss_pred EEeccc-ccCCC-CCeEEEEEEcCCc
Confidence 999999 77734 5 8888886543
No 71
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.55 E-value=2.5e-14 Score=140.32 Aligned_cols=169 Identities=12% Similarity=0.047 Sum_probs=133.0
Q ss_pred cchhhhhHHHHHHHHHHHHHcCCCCCCCeE-EEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHH-HHHHhCCc-EE
Q 021539 119 FKGNFISIPEIQARNRALKHCGLSEDEYLV-LFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIK-GFAAQKES-KV 195 (311)
Q Consensus 119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~V-vFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~-~la~~~G~-~V 195 (311)
+..........++++.+.++++.+ ++|.| ++++++|.++..++.++--++|+.++. .+..+..|. +.+++.|+ +|
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv-~g~FG~r~~~eia~~~g~~~v 109 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSMLGCRGVDVLA-WESFGKGWVTDVTKQLKLPDV 109 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHcCCCCCCeEEE-ECHHHHHHHHHHHHhcCCCCc
Confidence 556667778889999999999984 45655 558999999999988873246777764 344566665 88888899 58
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l 273 (311)
..+...| +..+++++++. .+ . |++.|+ +||+++|+++|.... ++++++|||+.++ |..|+|++
T Consensus 110 ~~l~~~~-g~~~~~~~ve~---~~------~-v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~-g~~~l~~d-- 174 (374)
T TIGR01365 110 RVLEAEY-GKLPDLKKVDF---KN------D-VVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAA-FAQDLDYH-- 174 (374)
T ss_pred EEEcCCC-CCCCCHHHcCC---CC------C-EEEecCCCchheecccccccccc-CCCcEEEEccchh-cCCCCChh--
Confidence 8888877 55678887762 11 2 456677 699999998775322 5899999999999 99999998
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
++|+++++.+| .+|.|.|+++++++++.++.
T Consensus 175 ~iDv~~tgsQK-~L~~ppGls~v~vs~~Al~~ 205 (374)
T TIGR01365 175 KLDVVTFSWQK-VLGGEGAHGMLILSPRAVAR 205 (374)
T ss_pred HCcEEEEechh-ccCCCCceEEEEECHHHHHH
Confidence 49999999999 77779999999999988754
No 72
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.55 E-value=1.5e-13 Score=134.88 Aligned_cols=160 Identities=13% Similarity=0.020 Sum_probs=118.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++......++.|+++|+++|++ + +++|+|+++|+..++.++ +++||+|++ ...|.. ..+...++..|+++.+
T Consensus 56 ~r~~~p~~~~le~~la~l~g~~--~--~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 56 SRFTNPTVTMFQERLAALEGAE--A--CVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred ECCCChHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 4445556789999999999984 3 788999999999888877 578999864 444542 2233445667999988
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ +.++++++++++ +++|.+.. +.+|.+.|+++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus 131 vd~~------d~~~l~~~i~~~-----tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~-~~~~~pl-~~g 197 (390)
T PRK08133 131 VDLT------DLDAWRAAVRPN-----TKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCT-PALQQPL-KLG 197 (390)
T ss_pred ECCC------CHHHHHHhcCcC-----CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence 8763 567888888764 56777643 36999999999966 6999999999999876 5433333 357
Q ss_pred CcEEEEccccCcCCCCCc--eEE-EEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITC-LLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~-L~vr~ 300 (311)
+|++++|++| ++| +.| +|. ++.++
T Consensus 198 ~Divv~S~sK-~~~-g~g~~~GG~vv~~~ 224 (390)
T PRK08133 198 ADVVIHSATK-YLD-GQGRVLGGAVVGSK 224 (390)
T ss_pred CcEEEeecce-eec-CCcceEeEEEEcCH
Confidence 8999999999 777 445 544 44443
No 73
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.54 E-value=1.6e-13 Score=132.56 Aligned_cols=162 Identities=12% Similarity=0.063 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
....+.|+.+|+++|++ + ++.++|+++|++.+..++ +++||+|+ ...+|.+. +. .++..+.+...++
T Consensus 83 ~~~~~le~~ia~~~g~~--~--~ii~~~~~~a~~~~~~~l-~~~gd~vi~~~~~~~s~-~~-~~~~~~~~~~~~~----- 150 (393)
T TIGR01822 83 DIHKELEAKIAAFLGTE--D--TILYASCFDANGGLFETL-LGAEDAIISDALNHASI-ID-GVRLCKAKRYRYA----- 150 (393)
T ss_pred HHHHHHHHHHHHHhCCC--c--EEEECchHHHHHHHHHHh-CCCCCEEEEeccccHHH-HH-HHHhcCCceEEeC-----
Confidence 34568999999999983 2 455578899999998887 68999986 44555532 21 1222233332221
Q ss_pred cccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCC
Q 021539 205 LRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALA 271 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~ 271 (311)
.++.++|++.+++..+. .++++|++.++ .+|.+.|+++|.+ |+++|+++++|++|++ |.... ++.
T Consensus 151 -~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~-g~~~~~~~~~~~~~~~~ 228 (393)
T TIGR01822 151 -NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT-GFLGPTGRGSHELCGVM 228 (393)
T ss_pred -CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc-cCcCCCCCchHHhcCCC
Confidence 25778888888752111 13678887765 5999999999966 6999999999999988 76532 232
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
.++|++++|+|| ++|++ ..|+++.+++..+
T Consensus 229 -~~~di~~~s~sK-~l~g~-r~G~~~~~~~~~~ 258 (393)
T TIGR01822 229 -GRVDIITGTLGK-ALGGA-SGGFTTARKEVVE 258 (393)
T ss_pred -CCCeEEEEEChH-HhhCC-CcEEEEeCHHHHH
Confidence 268999999999 56646 4699888765543
No 74
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=3e-13 Score=132.80 Aligned_cols=160 Identities=14% Similarity=-0.026 Sum_probs=117.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|+. + .|+| ++++.|+.+++. .+++||+|+ +..+|.. ..+...+++.|+++.+
T Consensus 49 ~r~~~p~~~~le~~lA~l~g~~-~--~v~~-~sG~~ai~~~l~--~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGGT-K--GFAF-ASGMAAISTAFL--LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-C--eEEE-CCHHHHHHHHHH--HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 4444455678999999999985 2 3666 555678877665 257899986 4455553 2344556667999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ +.+++++.++++ +++|.+... .+|.+.|+++|.+ ||++|+++++|++|+. +.....+ +++
T Consensus 123 v~~~------d~~~l~~~l~~~-----tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~~~-~~g 189 (390)
T PRK08064 123 VDMT------NLEEVAQNIKPN-----TKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLT-PLLQKPL-DLG 189 (390)
T ss_pred ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCc-ccccCch-hhC
Confidence 8763 467888888765 467766533 5999999999966 6999999999999988 7654344 468
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+|++++|+|| ++++|.| .|++++++
T Consensus 190 ~Divv~S~tK-~~~G~~~~laG~~v~~~ 216 (390)
T PRK08064 190 ADVVLHSATK-FLAGHSDVLAGLAVVKD 216 (390)
T ss_pred CcEEEeecce-eccCCccceeEEEEeCC
Confidence 9999999999 6655877 47777764
No 75
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.54 E-value=2e-13 Score=133.68 Aligned_cols=162 Identities=9% Similarity=0.021 Sum_probs=118.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~v 198 (311)
+.-....+..++++|++.|+. + +++|+|+++|+..++.++ +++||+|+ +...++.. .+....+..|+++..+
T Consensus 46 r~gnPt~~~lE~~lA~l~g~~--~--~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~ 120 (377)
T TIGR01324 46 RRGTLTHFALQDAMCELEGGA--G--CYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY 120 (377)
T ss_pred CCCCccHHHHHHHHHHHhCCC--c--EEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 333334457888899999973 3 889999999999999888 68999987 43344321 1222345568888777
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+. .++++++++++ +++|.+.+. .+|.+.|+++|.+ ||++|+++++|++|+. |... +.-++++
T Consensus 121 d~~~------~e~l~~~i~~~-----tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~-g~~~-~pl~~ga 187 (377)
T TIGR01324 121 DPLI------GEDIATLIQPN-----TKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAA-GLLF-KPLEHGV 187 (377)
T ss_pred CCCC------HHHHHHhcCCC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-cccc-CccccCc
Confidence 5431 26788888765 578877544 5899999999966 6999999999999999 8762 3335799
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
|+++.|++| ++|++.+ .|+++.+++.
T Consensus 188 Divv~S~tK-~l~G~~d~~gG~v~~~~~~ 215 (377)
T TIGR01324 188 DISIQAGTK-YLVGHSDIMIGTVVANART 215 (377)
T ss_pred eEEEecCce-eccCCCCceEEEEEeCHHH
Confidence 999999999 5554755 4667666543
No 76
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=2.9e-13 Score=134.91 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=121.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v 198 (311)
+......+...+.+|++.|+. . .++|+|++.|+..++.++ +.+||+|+.. ..|.. ..+...++..|++++++
T Consensus 60 r~~~p~~~~Le~~lA~leg~~--~--al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v 134 (431)
T PRK08248 60 RIMNPTTDVFEKRIAALEGGI--G--ALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV 134 (431)
T ss_pred CCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE
Confidence 333334557888899999973 3 788999999999888777 6789998643 34432 23444566779999888
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.. +.++++++++++ +++|.+.+. .+|.++|+++|.+ ||++|+++++|++++. +....++ ++++
T Consensus 135 d~~------d~e~l~~ai~~~-----tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~-~~~~~pl-~~ga 201 (431)
T PRK08248 135 DPS------DPENFEAAITDK-----TKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFAS-PYLLRPI-EHGA 201 (431)
T ss_pred CCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCc-cccCChh-HcCC
Confidence 753 578888888765 467666433 5899999999976 6999999999999987 7665555 5799
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
|+++.|+|| ++|+| | +|++++.+.
T Consensus 202 Divv~S~tK-~lgg~-g~~~Gg~v~~~~ 227 (431)
T PRK08248 202 DIVVHSATK-FIGGH-GTSIGGVIVDSG 227 (431)
T ss_pred CEEEEcCcc-ccCCC-CCceEEEEEeCC
Confidence 999999999 77745 5 888888643
No 77
>PLN02263 serine decarboxylase
Probab=99.51 E-value=5.5e-13 Score=134.10 Aligned_cols=174 Identities=8% Similarity=-0.011 Sum_probs=122.9
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.++..+.++=+-+++++|.+++++.=+||+|+|||+.+.+.... +.+...++.+.+-|.. +...++-.|.+++.||.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~S-v~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHH-HHHHHHhcCCcceEeccC
Confidence 45556668999999999998655556899999999876443321 1121234433333322 334455568999999998
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCc-----EEEecccccCccCc-------
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAW-----HVLLDATGLVFGED------- 266 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~-----~vlvDAaQsv~G~~------- 266 (311)
. ++++|.+.|++.|.++.. ...+|+.++- .+|.+=||++|++ |+++|+ ++|||||-.- .-.
T Consensus 209 ~-~g~mD~~aL~~aI~~d~~--~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG-~~lPf~~~~~ 284 (470)
T PLN02263 209 V-SGEIDCADFKAKLLANKD--KPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFG-LMMPFVKRAP 284 (470)
T ss_pred C-CCcCcHHHHHHHHHhCCC--CcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchh-hHhhhccccc
Confidence 5 789999999999976531 1334444433 6999999999977 588886 9999999543 222
Q ss_pred ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 267 QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 267 pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
++|+.. .+|-+++++|| |++.|.++|++++|++..
T Consensus 285 ~~df~~-~vDSIsvD~HK-~l~~P~~cgvll~R~~~~ 319 (470)
T PLN02263 285 KVTFKK-PIGSVSVSGHK-FVGCPMPCGVQITRMEHI 319 (470)
T ss_pred ccCCCc-CccEEEECCcc-ccCCCcCEEEEEEehhhH
Confidence 256554 49999999999 666699999999997643
No 78
>PLN02721 threonine aldolase
Probab=99.51 E-value=2e-13 Score=129.34 Aligned_cols=166 Identities=14% Similarity=0.150 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHH--HHHHhCCcEEEEEeCCCCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIK--GFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~--~la~~~G~~V~~vp~~~~~ 204 (311)
..+.|+.+|+++|++ . ++||+|+|+++..++..+...+||+|+. ...|... +. ..+...|.+++.+|.+. +
T Consensus 42 ~~~l~~~la~~~~~~--~--~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~-~ 115 (353)
T PLN02721 42 ALRLEEEMAKIFGKE--A--ALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHL-YENGGISTLGGVHPRTVKNNE-D 115 (353)
T ss_pred HHHHHHHHHHHhCCc--e--eEEecCccHHHHHHHHHHccCCCCeEEEcCccceeh-hcccchhhhcCceeEecCCCc-C
Confidence 568999999999984 2 6788888988776666654337898863 3444311 11 13455699999998775 6
Q ss_pred cccCHHHHHhhhhccCC--CCCceEEEEecc---cccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccCCC-
Q 021539 205 LRIKGSQLSQNFRRKCK--YTPKGLFSYPVV---VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLALA- 271 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~--~~~t~LVs~~~~---~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~- 271 (311)
+.+|.+++++.+++... ..++++|.+... .+|+.+| +++|.+ |+++|+++++|+++.+ +.. ..+..
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~ 194 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIF-NASVALGVPVHR 194 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhh-cchhhhCCCHHH
Confidence 77899999999973100 012567776433 3788888 456755 6899999999999987 531 12222
Q ss_pred -CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 272 -LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 272 -~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
..++|++++|+|| ++|+|.| |+++.+++.
T Consensus 195 ~~~~~d~~~~s~sK-~l~~~~G-~~~~~~~~~ 224 (353)
T PLN02721 195 LVKAADSVSVCLSK-GLGAPVG-SVIVGSKSF 224 (353)
T ss_pred HhhhCCEEEEeccc-ccCCcee-eEEecCHHH
Confidence 2378999999999 6664644 345555544
No 79
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.51 E-value=3.1e-13 Score=145.86 Aligned_cols=165 Identities=15% Similarity=0.081 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhcCCCCCCC----EE-EEccCcChHHHHHHHHhCCcEE
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKE-----AMLMIGESYPFFKGN----YY-LTIISEESDYIKGFAAQKESKV 195 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTe-----alnlv~~s~~~~~Gd----~I-ls~~eh~~~~~~~la~~~G~~V 195 (311)
+.+.+..+-+++++|.+ . +.|++|+|. ++ ++++.+.+++|+ .| ++...|.++.. .+...|++|
T Consensus 542 ~~i~e~q~~l~eltG~d--~--~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis~~aH~snp~--sa~~~G~~v 614 (954)
T PRK05367 542 ELIDQLEAWLAEITGYD--A--VSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIPSSAHGTNPA--SAVMAGMKV 614 (954)
T ss_pred HHHHHHHHHHHHHHCCC--C--EEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEEchhhhhhHH--HHHHCCCEE
Confidence 44568899999999985 3 889998873 33 566776666665 34 46666765432 234569999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecc-cccch-hcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVV-VNGTR-YSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL 270 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~-~tG~i-~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl 270 (311)
+.+|.+. +|.+|.++|++.++++. +.++++ +.- ..|.+ .|+++|.+ +|++|++++|||+|.. +...+.-
T Consensus 615 v~v~~d~-~G~iD~~~L~~~i~~~~----~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~-al~~l~~ 688 (954)
T PRK05367 615 VVVACDE-NGNIDLDDLRAKAEEHA----DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMN-AQVGLAR 688 (954)
T ss_pred EEECCCC-CCCcCHHHHHHHHhccC----CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChh-hccCCCC
Confidence 9999985 78999999999997531 234443 333 34654 79999976 6999999999999997 7666553
Q ss_pred -CCCCCcEEEEccccCcC----CCCCceEEEEEeCCCC
Q 021539 271 -ALHRPDLVLCTLDNNTH----AQPLKITCLLVRRKSF 303 (311)
Q Consensus 271 -~~l~~Dfl~~S~HK~l~----G~P~GiG~L~vr~~~~ 303 (311)
.++++|++++|+|||++ |+++|+|+|++|+.+.
T Consensus 689 pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~ 726 (954)
T PRK05367 689 PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA 726 (954)
T ss_pred hhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc
Confidence 46899999999999432 1244688999996543
No 80
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.51 E-value=1.2e-12 Score=128.05 Aligned_cols=157 Identities=13% Similarity=0.062 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
.++..+.+++++|++ . +++|+|+|+|+++++.++.+.+||+|+ +...+... . ..+...|+++++++++..+..
T Consensus 33 ~~~~e~~la~~~g~~--~--~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~-~-~~~~~~G~~~v~vd~d~~~~~ 106 (376)
T TIGR02379 33 SRRCETWLENRTGTK--K--ALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST-A-NAFVLRGAKIVFVDIRPDTMN 106 (376)
T ss_pred HHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH-H-HHHHHcCCEEEEEecCCCcCC
Confidence 346667788888873 3 999999999999999888778999986 44554422 2 223456999999999864467
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEccc
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCTLD 283 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S~H 283 (311)
+|.+++++.++++ +++|...+ .+|...|+++|.+ |+++|++++.|++|+. |.. .+-...+ .|+.+||+|
T Consensus 107 ~d~~~le~~i~~~-----tk~Iip~~-~~G~~~d~~~I~~la~~~~i~vIeDaa~~~-g~~-~~~~~~g~~~~~~~fSf~ 178 (376)
T TIGR02379 107 IDETLIESAITHR-----TKAIVPVH-YAGVACDMDTIMALANKHQLFVIEDAAQGV-MST-YKGRALGSIGHLGTFSFH 178 (376)
T ss_pred CCHHHHHHhcCcC-----ceEEEEeC-CCCCccCHHHHHHHHHHCCCEEEEECcccc-CCc-cCCcccCCCCCEEEEeCC
Confidence 8999999988764 56765433 5899999999966 6999999999999999 853 3433333 399999998
Q ss_pred cC--cCCCCCceEEEEEe
Q 021539 284 NN--THAQPLKITCLLVR 299 (311)
Q Consensus 284 K~--l~G~P~GiG~L~vr 299 (311)
++ +..++. .|+++.+
T Consensus 179 ~~K~l~~g~~-gG~v~~~ 195 (376)
T TIGR02379 179 ETKNYTSGGE-GGALLIN 195 (376)
T ss_pred CCCcCcccCC-ceEEEEC
Confidence 73 222233 3655555
No 81
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=5.9e-13 Score=131.06 Aligned_cols=159 Identities=11% Similarity=-0.042 Sum_probs=114.5
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v 198 (311)
+.-....+..++++|++.|+ +. +++|+|+++|+++++.++ +++||+|++.. .+... .+.......|+++.++
T Consensus 49 R~~npt~~~Le~~lA~leg~--e~--ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v 123 (388)
T PRK08861 49 RSGNPNRGLLEQTLSELESG--KG--AVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV 123 (388)
T ss_pred CCCCchHHHHHHHHHHHhCC--Ce--EEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE
Confidence 33333445788899999996 33 999999999999999888 67999987543 33321 2223344557888777
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+. .+.++++++++++ +++|.+.. +-+|.++|+++|.+ ||++|+++++|.+++. |....++ ++++
T Consensus 124 d~------~d~e~l~~~i~~~-----tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~-~~~~~pl-~~Ga 190 (388)
T PRK08861 124 DQ------SDAAALDAALAKK-----PKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLT-PVLQKPL-ELGA 190 (388)
T ss_pred CC------CCHHHHHHhcCcC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc-cccCCCc-ccCC
Confidence 53 3678888888764 56776643 35999999999966 6999999999999987 6544344 3589
Q ss_pred cEEEEccccCcCCCCCc-eEE-EEEe
Q 021539 276 DLVLCTLDNNTHAQPLK-ITC-LLVR 299 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G-iG~-L~vr 299 (311)
|++++|+|| ++|+|.+ +|+ ++.+
T Consensus 191 Divv~S~tK-~l~G~~d~~gG~i~~~ 215 (388)
T PRK08861 191 DFVIHSTTK-YINGHSDVIGGVLITK 215 (388)
T ss_pred CEEEeecce-eccCCCcceeEEEEec
Confidence 999999999 5544765 344 4444
No 82
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.51 E-value=3.1e-13 Score=127.61 Aligned_cols=161 Identities=14% Similarity=0.062 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
....++.|+.+++++|++ + .+++.++|+++..++.++ +.+|+.|++ ..+|.. .+ ..++..|+++..++.
T Consensus 45 ~~~~~~l~~~la~~~~~~--~--~iv~~sg~~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~-~~~~~~g~~~~~~~~--- 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKE--A--ALVFSSGYAANDGVLSTL-AGKGDLIISDSLNHAS-II-DGIRLSGAKKRIFKH--- 114 (349)
T ss_pred chHHHHHHHHHHHHhCCC--C--EEEeccHHHHHHHHHHHh-cCCCCEEEEehhhhHH-HH-HHHHHcCCceEEecC---
Confidence 444578999999999984 2 444555577777666665 468998864 344432 22 234556888877653
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc--------cCCCC
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--------LALAL 272 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--------ldl~~ 272 (311)
++.+++++++++.....++++|.+.+. .+|.+.|+++|.+ |+++|+++++|++|++ |..+ ++...
T Consensus 115 ---~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~-g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 115 ---NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSV-GVYGPHGRGVEEFGGLT 190 (349)
T ss_pred ---CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhhcccc
Confidence 356778888875210113567776544 5899999999966 7999999999999997 7553 33445
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.+.|+++.|+|| ++| +.| |+++.+++.
T Consensus 191 ~~~~i~~~s~sK-~~~-~~g-G~i~~~~~~ 217 (349)
T cd06454 191 DDVDIIMGTLGK-AFG-AVG-GYIAGSKEL 217 (349)
T ss_pred ccCcEEEeechh-hhc-ccC-CEEECCHHH
Confidence 678999999999 888 556 777766554
No 83
>PRK07179 hypothetical protein; Provisional
Probab=99.50 E-value=4.1e-13 Score=131.34 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=112.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.+.++++|+++|++ + ++||+|+|+|+++++.++. .+|+.++ ...+|.+. + ..++..|+++..++. .
T Consensus 102 ~~le~~la~~~g~~--~--~~~~~sG~~An~~~l~~l~-~~g~~v~~~~~~h~s~-~-~~~~~~g~~~~~~~~------~ 168 (407)
T PRK07179 102 PQFEKKLAAFTGFE--S--CLLCQSGWAANVGLLQTIA-DPNTPVYIDFFAHMSL-W-EGVRAAGAQAHPFRH------N 168 (407)
T ss_pred HHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHhC-CCCCEEEEECCcCHHH-H-HHHHHCCCeEEEecC------C
Confidence 45667999999983 3 7899999999999998874 5688875 55565432 2 223345666544322 4
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCCCC
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALHRP 275 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l~~ 275 (311)
|.++|+++++++ .+++|++... .+|.++|+++|.+ |+++|+++++|.+|+. |... +++. .++
T Consensus 169 d~~~l~~~l~~~----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~-~~v 242 (407)
T PRK07179 169 DVDHLRRQIERH----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSL-GTHGPQGAGLVAELGLT-SRV 242 (407)
T ss_pred CHHHHHHHHHhc----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccc-cCcCCCCCchHHhcCCC-CCC
Confidence 778999988753 1467777644 5999999999976 6999999999999998 7532 2332 257
Q ss_pred cEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 276 DLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
|++++|+|| .+| + ++|+++.++++.
T Consensus 243 di~~~S~sK-~~g-~-~~G~l~~~~~~~ 267 (407)
T PRK07179 243 HFITASLAK-AFA-G-RAGIITCPRELA 267 (407)
T ss_pred CEEEeechH-hhh-c-cCeEEEeCHHHH
Confidence 999999999 888 5 489999887653
No 84
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=9.6e-13 Score=130.85 Aligned_cols=156 Identities=14% Similarity=0.086 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~ 203 (311)
..++..+++|++.|.. . .++++|+++|+.+++.++ +++||+|++ ...|... .+...+++.|+++.+++.+
T Consensus 64 ~~~~le~~lA~l~g~~--~--al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (427)
T PRK05994 64 TNAVLEERVAALEGGT--A--ALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-- 136 (427)
T ss_pred cHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC--
Confidence 3457788999999984 2 678899999999988887 678999874 4455522 3344456679999888753
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
+.++++++++++ +++|.+.+. .+|.++|+++|.+ ||++|+++++|.+|+. |...-.+ ++++|+++.
T Consensus 137 ----d~~~l~~ai~~~-----tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~pl-~~gaDivv~ 205 (427)
T PRK05994 137 ----DPASFERAITPR-----TKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLAS-PYLIRPI-EHGADIVVH 205 (427)
T ss_pred ----CHHHHHHhcCcC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCCcEEEE
Confidence 567888888764 567776543 5899999999966 6999999999999998 7655444 479999999
Q ss_pred ccccCcCCCCCc-eEEEEEeCC
Q 021539 281 TLDNNTHAQPLK-ITCLLVRRK 301 (311)
Q Consensus 281 S~HK~l~G~P~G-iG~L~vr~~ 301 (311)
|+|| ++|+|.| +|++++...
T Consensus 206 S~tK-~lgg~~~~~gG~v~~~~ 226 (427)
T PRK05994 206 SLTK-FLGGHGNSMGGIIVDGG 226 (427)
T ss_pred cCcc-ccCCCCCcEEEEEEeCC
Confidence 9999 7774644 788888543
No 85
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.49 E-value=1.7e-13 Score=138.30 Aligned_cols=173 Identities=13% Similarity=-0.005 Sum_probs=118.2
Q ss_pred chhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC----C--------------------------
Q 021539 120 KGNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF----F-------------------------- 168 (311)
Q Consensus 120 ~G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~----~-------------------------- 168 (311)
.|-.....+ .-+.+++.++||++-.+ | =--+++.|+..+..++.- .
T Consensus 88 ~g~~~~d~ie~l~~~ra~~lf~a~~an--v-qp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~ 164 (493)
T PRK13580 88 AGCQNVDTVEWEAAEHAKELFGAEHAY--V-QPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAEL 164 (493)
T ss_pred CCCchHHHHHHHHHHHHHHHhCCCccc--c-cCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccC
Confidence 344444444 47999999999995322 3 234666777766665521 0
Q ss_pred CCCEEEEc-cC---cChHHH-HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHH
Q 021539 169 KGNYYLTI-IS---EESDYI-KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMH 242 (311)
Q Consensus 169 ~Gd~Ils~-~e---h~~~~~-~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~ 242 (311)
.||.|++. .+ |-+... -.+ .....++...+++..++.+|.+++++.++++ +.+|++++. ..|...|++
T Consensus 165 ~gd~i~~l~l~~GGHlthg~~~n~-~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~-----~plvii~g~S~~~~~~dl~ 238 (493)
T PRK13580 165 GNQRLLGMSLDSGGHLTHGFRPNI-SGKMFHQRSYGVDPDTGLLDYDEIAALAREF-----KPLILVAGYSAYPRRVNFA 238 (493)
T ss_pred CCCEEEeecCCCCCeeecCcccch-hhheeeeEecccCcccCccCHHHHHHHHhhc-----CCEEEEeCccccCCCcCHH
Confidence 16888633 22 211110 001 1112455556676557899999999999875 467777776 457789999
Q ss_pred HHHH-HHHCCcEEEecccccCccCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 243 WISE-AHRNAWHVLLDATGLVFGEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 243 ~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+|.+ |+++|++++||++|++ |.+..++.. .++||+++|+|||++| |.| |+++.++++.+
T Consensus 239 ~i~eia~~~gA~L~VD~AH~~-Gligg~~~~~~~~~~~~~D~vtgT~hKaL~G-P~G-G~I~~~~~l~~ 304 (493)
T PRK13580 239 KLREIADEVGAVLMVDMAHFA-GLVAGKVFTGDEDPVPHADIVTTTTHKTLRG-PRG-GLVLAKKEYAD 304 (493)
T ss_pred HHHHHHHHcCCEEEEECchhh-ceeccccchhhcCCCCCCcEEEeCChhhccC-CCe-EEEEecHHHHH
Confidence 9977 6999999999999999 999877621 3699999999996667 987 88998877543
No 86
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.49 E-value=1.1e-12 Score=129.47 Aligned_cols=154 Identities=11% Similarity=-0.002 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~ 203 (311)
.....|++||++.++. + +++|+|+++|++.++.++ +++||+|+. ...+... .+....++.|+++.+++.+
T Consensus 62 t~~~Le~~iA~le~~~--~--~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-- 134 (394)
T PRK09028 62 THFAFQAAIVELEGGA--G--TALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-- 134 (394)
T ss_pred hHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC--
Confidence 3457899999998873 3 899999999999998887 689999874 3344321 1223345578888877542
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
+.++++++++++ +++|.+... -+|.+.|+++|.+ ||++|++++||.+|+. |. .++--++++|+++.
T Consensus 135 ----~~e~l~~~l~~~-----TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~-p~-~~~Pl~~GaDivv~ 203 (394)
T PRK09028 135 ----IGEGIRELIRPN-----TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWAS-PI-NSRPFEMGVDISIQ 203 (394)
T ss_pred ----CHHHHHHhcCcC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccc-cc-cCCccccCceEEEE
Confidence 346788888765 578887654 5899999999966 6999999999999998 73 23333579999999
Q ss_pred ccccCcCCCCCc--eEEEEEe
Q 021539 281 TLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 281 S~HK~l~G~P~G--iG~L~vr 299 (311)
|+|||+.| +.+ .|+++.+
T Consensus 204 S~tK~l~G-h~d~~~G~~~~~ 223 (394)
T PRK09028 204 AATKYIVG-HSDVMLGTATAN 223 (394)
T ss_pred eCCeEecC-CCCEEEEEEECC
Confidence 99995445 733 3444433
No 87
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.48 E-value=4.9e-13 Score=125.96 Aligned_cols=168 Identities=20% Similarity=0.176 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH-HHHHHhCCcEEEEEeCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI-KGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~-~~la~~~G~~V~~vp~~~~ 203 (311)
...++.|+.+++++| +++ ++||+|+|+|+.+++.++ +.+|+.|+ +...|..... ...+...|+++..+|.+.
T Consensus 32 ~~~~~l~~~~a~~~g--~~~--~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~- 105 (338)
T cd06502 32 PTTAKLEARAAELFG--KEA--ALFVPSGTAANQLALAAH-TQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN- 105 (338)
T ss_pred HHHHHHHHHHHHHhC--CCe--EEEecCchHHHHHHHHHh-cCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCC-
Confidence 345689999999999 333 999999999999998887 57889886 4445542111 012233589998898753
Q ss_pred CcccCHHHHHhhhhccCCC--CCceEEEEecc-cccchhcH---HHHHH-HHHCCcEEEecccccC-----ccCcccCCC
Q 021539 204 DLRIKGSQLSQNFRRKCKY--TPKGLFSYPVV-VNGTRYSM---HWISE-AHRNAWHVLLDATGLV-----FGEDQLALA 271 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~--~~t~LVs~~~~-~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv-----~G~~pldl~ 271 (311)
+.+|.++|++++++..+. .++++|.++.. .+|.++|. ++|.+ |+++|+++++|+++.. .|. +++..
T Consensus 106 -~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~ 183 (338)
T cd06502 106 -GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV-ALKTY 183 (338)
T ss_pred -CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHH
Confidence 568999999998742100 12567766543 35755454 55654 5889999999998742 032 22221
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
..++|++++|+|| +||.| |-++++.+++..
T Consensus 184 ~~~~d~~~~s~sK-~~~~~-~g~~~~~~~~~~ 213 (338)
T cd06502 184 KSGVDSVSFCLSK-GGGAP-VGAVVVGNRDFI 213 (338)
T ss_pred HhcCCEEEEeccc-cCCCc-cceEEECCHHHH
Confidence 2478999999999 88856 534455565543
No 88
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.47 E-value=3.3e-13 Score=128.31 Aligned_cols=164 Identities=17% Similarity=0.120 Sum_probs=117.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
++.|+.+|+++|+++++ |+||+|+|+++++++.++ ..+|+.|+...-... .....++..|+++..+|.+. ++.++
T Consensus 57 ~~lr~~ia~~~~~~~~~--i~~~~G~~~~l~~~~~~l-~~~gd~v~~~~p~y~-~~~~~~~~~g~~~~~~~~~~-~~~~d 131 (346)
T TIGR01141 57 AELKQALADYYGVDPEQ--ILLGNGSDEIIELLIRAF-LEPGDAVLVPPPTYS-MYEISAKIHGAEVVKVPLDE-DGQLD 131 (346)
T ss_pred HHHHHHHHHHhCcChHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCHH-HHHHHHHHcCCeEEEeccCC-CCCCC
Confidence 58999999999987654 999999999999998887 367888875432221 22333456799999999875 57789
Q ss_pred HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccC--cccCC-CCCCCcEEEE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGE--DQLAL-ALHRPDLVLC 280 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~--~pldl-~~l~~Dfl~~ 280 (311)
.+++++.+.++ +++|.++.. -||.++|++++.+ ++.. ++++++|.+++-... .++++ .....++++.
T Consensus 132 ~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~ 206 (346)
T TIGR01141 132 LEDILVAIDDK-----PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLR 206 (346)
T ss_pred HHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEe
Confidence 99998877554 466666533 6999999999866 4544 999999999872121 12222 1123357788
Q ss_pred ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 281 TLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 281 S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
|++| +|| +.| +|++++++++.+
T Consensus 207 S~sK-~~g-~~G~r~G~~~~~~~~~~ 230 (346)
T TIGR01141 207 TLSK-AFG-LAGLRIGYAIANAEIID 230 (346)
T ss_pred hhhH-hhh-chhhhceeeecCHHHHH
Confidence 9999 776 336 799998776543
No 89
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.46 E-value=4e-13 Score=143.53 Aligned_cols=163 Identities=15% Similarity=0.073 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-HH---HHHHhcCCCCCC----CEE-EEccCcChHHHHHHHHhCCcEEEE
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKE-AM---LMIGESYPFFKG----NYY-LTIISEESDYIKGFAAQKESKVIA 197 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTe-al---nlv~~s~~~~~G----d~I-ls~~eh~~~~~~~la~~~G~~V~~ 197 (311)
.+.+-.+.+++++|.+ . +-|-+|++. |. -++++.|--.+| +.+ ++..+|++|... +...|++|+.
T Consensus 544 ~i~elq~~l~eLtGmd--~--~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--a~~~GieVv~ 617 (954)
T PRK12566 544 MIDELEAWLCAITGFD--A--ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--AQMAGMRVVI 617 (954)
T ss_pred HHHHHHHHHHHHHCCC--e--EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--HHHCCCEEEE
Confidence 3567778999999995 2 567775554 22 233344311122 344 466778766432 4456999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHHHHH-HHHCCcEEEecccccCccCcccC-CCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-LALH 273 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-l~~l 273 (311)
+|.+. +|.+|.++|++++++.. .++..|.+++. ..| ...|+++|.+ +|++|+++++||+|.+ +...++ ..++
T Consensus 618 Vp~D~-~G~iDle~L~a~I~~~~--~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~-a~~~l~~Pg~~ 693 (954)
T PRK12566 618 VECDP-DGNVDLDDLKAKAAAAG--DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLN-AQVGLARPADI 693 (954)
T ss_pred eccCC-CCCcCHHHHHHHhhccC--CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChh-hccCCCChhhc
Confidence 99985 78999999999997321 12444444544 334 4477999966 6999999999999999 999988 4889
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
++||+++++|| +||.|.|.|++|+..
T Consensus 694 GADi~~~s~HK-tf~~P~G~GGP~vG~ 719 (954)
T PRK12566 694 GADVSHMNLHK-TFCIPHGGGGPGMGP 719 (954)
T ss_pred CCCEEEecCCc-ccCcCccCCCCccch
Confidence 99999999999 666699999999887
No 90
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.46 E-value=2.3e-12 Score=127.60 Aligned_cols=160 Identities=12% Similarity=0.011 Sum_probs=119.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~v 198 (311)
+......++.++++|++.|+. . .+||+|+++|+..++.++ +++|++|+ +...++. ..+...++..|+++..+
T Consensus 53 r~~~p~~~~le~~lA~l~g~~--~--~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v 127 (418)
T TIGR01326 53 RLMNPTTDVLEQRIAALEGGV--A--ALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV 127 (418)
T ss_pred CCCChhHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE
Confidence 444444568999999999973 3 889999999999888776 56899986 4434432 22344456679999888
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+ +.++++++++++ +++|.+... -+|.+.|+++|.+ ||++|+++++|.+++. |.....+ .+++
T Consensus 128 ~~~------d~~~l~~~l~~~-----t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~-~~~~~~l-~~g~ 194 (418)
T TIGR01326 128 DPD------DPEEFEKAIDEN-----TKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT-PYLCRPI-DHGA 194 (418)
T ss_pred CCC------CHHHHHHhcCcC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch-hhcCCch-hcCC
Confidence 752 578898888765 456655432 5899999999966 6999999999999997 7433333 4679
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
|+++.|++| ++| +.| +|.++++++
T Consensus 195 Divv~S~sK-~l~-g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 195 DIVVHSATK-YIG-GHGTAIGGVIVDGG 220 (418)
T ss_pred eEEEECccc-ccc-CCccceEEEEEecc
Confidence 999999999 777 335 888888653
No 91
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.46 E-value=4.2e-12 Score=123.49 Aligned_cols=154 Identities=14% Similarity=0.070 Sum_probs=113.1
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
++..+.+++++|++ . +++|+|+|+|+++++..+.+.+||+|++. ..+.. . ...+...|+++++++++..+..+
T Consensus 34 ~~~e~~la~~~g~~--~--~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~-~-~~~~~~~G~~~v~~d~d~~~~~~ 107 (375)
T PRK11706 34 RRCQQWLEQRFGSA--K--VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS-T-ANAFVLRGAKIVFVDIRPDTMNI 107 (375)
T ss_pred HHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH-H-HHHHHHcCCEEEEEecCCCcCCc
Confidence 45666788889883 3 99999999999998877767789998744 44432 2 23345569999999988644578
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC--CCCcEEEEccc-
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL--HRPDLVLCTLD- 283 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~--l~~Dfl~~S~H- 283 (311)
+.+++++.++++ +++|.+.+ .+|...++++|.+ |+++|++++.|++|+. |.. .+-.. .-.|+-+||+|
T Consensus 108 d~~~le~~i~~~-----tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~-g~~-~~~~~~g~~~~~~~~Sf~~ 179 (375)
T PRK11706 108 DETLIEAAITPK-----TRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGV-MST-YKGRALGTIGHIGCFSFHE 179 (375)
T ss_pred CHHHHHHhcCCC-----CeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECcccc-ccc-cCCeeeecCcCEEEEeCCC
Confidence 999999998764 45555544 4899999999966 6999999999999999 852 22211 12599999999
Q ss_pred -cCcCCCCCce-EEEEEe
Q 021539 284 -NNTHAQPLKI-TCLLVR 299 (311)
Q Consensus 284 -K~l~G~P~Gi-G~L~vr 299 (311)
| .++ + |. |+++++
T Consensus 180 ~K-~l~-~-g~gG~~~~~ 194 (375)
T PRK11706 180 TK-NYT-A-GEGGALLIN 194 (375)
T ss_pred Cc-ccc-c-cCCeEEEEC
Confidence 9 777 5 54 444443
No 92
>PRK05939 hypothetical protein; Provisional
Probab=99.45 E-value=3e-12 Score=126.28 Aligned_cols=159 Identities=10% Similarity=-0.009 Sum_probs=117.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++.-....++..+++|++.|+.. .|+|++| +.|+..++.++ +++||+|++ ...+.. ..+.. .++.|+++.+
T Consensus 42 ~r~g~p~~~~lE~~la~leg~~~---~v~~ssG-~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~ 115 (397)
T PRK05939 42 ARQGTPTTAALEAKITKMEGGVG---TVCFATG-MAAIAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTM 115 (397)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCe---EEEeCCH-HHHHHHHHHHH-cCCCCEEEECCCccccHHHHHHH-HHhcCCEEEE
Confidence 44444556688889999999852 3766665 78999988877 689999874 334432 23333 4567999998
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.. +.++|+++++++ +++|.+.+. .+|.+.|+++|.+ ||++|+++++|++|+. | ..++...++
T Consensus 116 v~~~------d~e~l~~~l~~~-----tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~-~-~~~~~~~~g 182 (397)
T PRK05939 116 VDAT------DVQNVAAAIRPN-----TRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS-P-WLFRPKDVG 182 (397)
T ss_pred ECCC------CHHHHHHhCCCC-----CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc-c-cccCccccC
Confidence 8763 578899888765 577777544 5999999999966 7999999999999988 7 345666678
Q ss_pred CcEEEEccccCcCCCCCc-eEEEEEe
Q 021539 275 PDLVLCTLDNNTHAQPLK-ITCLLVR 299 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G-iG~L~vr 299 (311)
+|+++.|++| ++|++.+ +|+.++.
T Consensus 183 aDivv~S~sK-~~~g~g~~igg~v~~ 207 (397)
T PRK05939 183 ASLVINSLSK-YIAGHGNALGGAVTD 207 (397)
T ss_pred CEEEEecCee-cccCCCCeEEEEEec
Confidence 9999999999 6663422 4666654
No 93
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.45 E-value=9.6e-13 Score=125.73 Aligned_cols=167 Identities=15% Similarity=0.134 Sum_probs=127.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH-HhcCCCCCCCEEEEccCcC--hH-HH-HHHHHhCCcEEEEEeCCCC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMI-GESYPFFKGNYYLTIISEE--SD-YI-KGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv-~~s~~~~~Gd~Ils~~eh~--~~-~~-~~la~~~G~~V~~vp~~~~ 203 (311)
+..=.++|-++|+.++| |+.|.++|--++.+ +.++...+|+.++..-.+. .+ ++ ..+++-.+.. .+.
T Consensus 79 ~~lgdklApLiGA~~~E--vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~- 150 (407)
T COG3844 79 ERLGDKLAPLIGARAGE--VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDL- 150 (407)
T ss_pred hHHHHHhhhhhcCCCCc--eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccc-
Confidence 45667899999998776 88888877766554 4466666787765332222 21 11 2222222221 121
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
.+.+.+.++.+.+..+ +.+|+++++ -||..+++..|.. +|++|+++.-|-+|++ |..|+|+...++||-+.
T Consensus 151 ~~~~~P~~~~~~~~dd-----~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsa-Gavp~~Lh~~gaDfaig 224 (407)
T COG3844 151 EGVIAPRALEEAITDD-----VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSA-GAVPVDLHAAGADFAIG 224 (407)
T ss_pred eeeeChHHHHHhhccc-----eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhccc-CCcceeecccCCCeeee
Confidence 3556777888999876 689999988 5999999999955 7999999999999999 99999999999999999
Q ss_pred ccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539 281 TLDNNTHAQPLKITCLLVRRKSFDTTSST 309 (311)
Q Consensus 281 S~HK~l~G~P~GiG~L~vr~~~~~~~~p~ 309 (311)
+.||++.|+|-+.++|||.++..+.+-|+
T Consensus 225 csyKYLNgGPGapa~l~v~~~h~e~~~~~ 253 (407)
T COG3844 225 CSYKYLNGGPGAPAGLFVAPRHRERSWPP 253 (407)
T ss_pred eeceeccCCCCCceeEEeccccccccccc
Confidence 99998889999999999999998876665
No 94
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.44 E-value=1.9e-12 Score=138.79 Aligned_cols=168 Identities=14% Similarity=0.035 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHH---HHHHhcCCCCC----CCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAM---LMIGESYPFFK----GNYYL-TIISEESDYIKGFAAQKESKVIA 197 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTeal---nlv~~s~~~~~----Gd~Il-s~~eh~~~~~~~la~~~G~~V~~ 197 (311)
+.+.+...-++++.|.+.. =++.++++.|- -++++.+--.+ .+.++ +...|..+.. .++..|++|+.
T Consensus 530 q~i~elq~~l~eltGmd~~---Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--sa~~~G~~Vv~ 604 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAI---SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--SAAMAGMQVVP 604 (939)
T ss_pred HHHHHHHHHHHHHHCCCCc---ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--HHHHCCCEEEE
Confidence 4567899999999999731 23344444322 22444431111 23453 5555654422 14456999999
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhc-HHHHHH-HHHCCcEEEecccccCccCcccC-CCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYS-MHWISE-AHRNAWHVLLDATGLVFGEDQLA-LALH 273 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv~G~~pld-l~~l 273 (311)
+|.+. +|.+|.++|++++++.. ..+++|++++. .+|.+.| |++|.+ +|++|..+++||+|.. +...++ ..++
T Consensus 605 V~~d~-~G~iDle~L~~~i~~~~--~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~-al~~l~~Pg~~ 680 (939)
T TIGR00461 605 VNCDQ-DGNIDLVDLKNKAEQHG--DELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMN-AQVGLTSPGDL 680 (939)
T ss_pred eccCC-CCCcCHHHHHHHHhhcC--CceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChh-hCCCCCCcccc
Confidence 99975 89999999999997511 12677777765 5799988 999976 6999999999999988 655554 4678
Q ss_pred CCcEEEEccccCcC-----CCCCceEEEEEeCCCC
Q 021539 274 RPDLVLCTLDNNTH-----AQPLKITCLLVRRKSF 303 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~-----G~P~GiG~L~vr~~~~ 303 (311)
++||+++|+|||++ | |+|+|++.+|+.+.
T Consensus 681 GaDi~~~s~HKtf~~P~G~G-GPg~G~i~vr~~L~ 714 (939)
T TIGR00461 681 GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKSHLI 714 (939)
T ss_pred CCCEEEecCCccCCCCCCCC-CCCeEEEEEhhhch
Confidence 99999999999666 4 55789999997543
No 95
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.44 E-value=2.2e-12 Score=127.26 Aligned_cols=162 Identities=12% Similarity=-0.018 Sum_probs=116.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh-H-HHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES-D-YIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~-~-~~~~la~~~G~~V~~ 197 (311)
++......++.++.+|+++|++ . .+.++|++.|+.+++.++ +.+||+|++.. .|.. . .....++..|+++..
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~--~--~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGE--A--AVALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 4444444678999999999984 2 456667888999988876 68999987443 2321 1 123334567999888
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ +++.++++++++ +++|.+.. +-+|.+.|+++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus 135 vd~~------d~~~l~~~i~~~-----tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~-~~~~~~l-~~g 201 (403)
T PRK07503 135 VDLT------DPAALKAAISDK-----TRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCT-PYLQRPL-ELG 201 (403)
T ss_pred eCCC------CHHHHHHhcCcc-----CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence 8763 567888888764 46766642 25899999999966 6999999999999987 6544444 368
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
+|++++|++| ++|+|.+ .|+++.+++
T Consensus 202 ~Di~v~S~tK-~l~g~gd~~gG~v~~~~~ 229 (403)
T PRK07503 202 ADLVVHSATK-YLGGHGDITAGLVVGGKA 229 (403)
T ss_pred CCEEEccccc-cccCCCceeEEEEEcCHH
Confidence 9999999999 7774533 677775544
No 96
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.43 E-value=3.5e-12 Score=125.80 Aligned_cols=160 Identities=10% Similarity=0.003 Sum_probs=114.5
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|+. + .+.++++++|+..++.++ +++||+|++ ...|.. ..+...++..|+++.+
T Consensus 59 ~r~~~p~~~~le~~lA~l~g~~--~--~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 59 SRNTNPTVQAFEEKVRILEGAE--A--ATAFSTGMAAISNTLYTF-LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred cCCCChHHHHHHHHHHHHhCCC--e--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 5666666789999999999984 2 445555578999888776 578999874 444442 2234445567888877
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++. .+.++++++++++ +++|.+. .+-+|.++|+++|.+ ||++|+.+++|++++. +...-.+ .++
T Consensus 134 vd~------~d~e~l~~~i~~~-----tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~~ 200 (398)
T PRK08249 134 CET------GDHEQIEAEIAKG-----CDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFAT-PINQNPL-ALG 200 (398)
T ss_pred cCC------CCHHHHHHhcCCC-----CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCc-cccCCch-hhC
Confidence 653 3678899998765 5677663 336999999999966 6999999999999997 5433223 368
Q ss_pred CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539 275 PDLVLCTLDNNTHAQPL-KITCLLVR 299 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~-GiG~L~vr 299 (311)
+|++++|++| ++|++. ++|.+++.
T Consensus 201 ~Divv~S~sK-~l~g~~~~~gG~vv~ 225 (398)
T PRK08249 201 ADLVIHSATK-FLSGHADALGGVVCG 225 (398)
T ss_pred CCEEeccCce-ecCCCCCceEEEEEC
Confidence 9999999999 777343 24444443
No 97
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.43 E-value=2.5e-12 Score=127.32 Aligned_cols=169 Identities=13% Similarity=0.035 Sum_probs=113.3
Q ss_pred hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHH-HHhCCcEE--
Q 021539 121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGF-AAQKESKV-- 195 (311)
Q Consensus 121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~l-a~~~G~~V-- 195 (311)
|......+|+ +++++|+++|+. +.++|++++|.|+..++.++ .++||+|++.. .|.+...... ....+..+
T Consensus 68 G~~~~~~lE~~~~~~la~l~g~~---~alv~~~SG~~A~~~~l~al-~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (416)
T PRK13034 68 GCEFVDEVEALAIERAKQLFGCD---YANVQPHSGSQANGAVYLAL-LKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNA 143 (416)
T ss_pred CChHHHHHHHHHHHHHHHHhCCC---ceEEecCCcHHHHHHHHHHh-cCCCCEEEEcCccceeeeecCCcceeccceeee
Confidence 4455566676 999999999985 33577889999999999888 68999987543 4432110000 00011222
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC--
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL-- 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~-- 272 (311)
...+.+..++.+|.+++++.++.. ++++|.+....+|...|+++|.+ |+++|+++++|+||++ |........
T Consensus 144 ~~~~~~~~~~~~d~~~le~~l~~~----~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~-G~~~~g~~~~~ 218 (416)
T PRK13034 144 VQYGVDRLTGLIDYDEVEELAKEH----KPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIA-GLVAAGEHPNP 218 (416)
T ss_pred EEcccccccCCcCHHHHHHHHhhc----CCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccc-cCcccCCCCCC
Confidence 233333324568999999888642 14677654335899999999976 6999999999999998 876444311
Q ss_pred -CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 273 -HRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 273 -l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
..+|++++|+|||+.| |.| |+++.++
T Consensus 219 ~~~~Di~~~s~~K~l~g-~~G-G~v~~~~ 245 (416)
T PRK13034 219 FPHAHVVTTTTHKTLRG-PRG-GMILTND 245 (416)
T ss_pred CCCceEEEEeCcccCCC-CCC-eEEEECc
Confidence 2589999999994445 877 5555443
No 98
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.43 E-value=2.5e-12 Score=119.93 Aligned_cols=161 Identities=15% Similarity=0.063 Sum_probs=113.2
Q ss_pred HHHHHHHHHHcCCC----CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 129 IQARNRALKHCGLS----EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 129 e~aR~~IA~~Lga~----~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
++.|+.++++++.. ....+++||+|+|++++.++.++. .+|+.|+.. ..|+. ....++..|.++..+|.++
T Consensus 39 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~~~~~--~~~~~~~~~~~~~~i~~~~- 114 (350)
T cd00609 39 PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVPDPTYPG--YEAAARLAGAEVVPVPLDE- 114 (350)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEcCCCchh--HHHHHHHCCCEEEEEeccc-
Confidence 46777777777754 113359999999999999999884 568888643 34432 2334556689999999876
Q ss_pred CcccCH--HHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHH---H-HHHCCcEEEecccccCccCc----c---c
Q 021539 204 DLRIKG--SQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGED----Q---L 268 (311)
Q Consensus 204 ~g~id~--~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~~----p---l 268 (311)
++..+. +.++....++ +++|.+++. .+|.++|++++. + |+++|+++++|++++. +.. + .
T Consensus 115 ~~~~~~~~~~~~~~~~~~-----~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~~~ 188 (350)
T cd00609 115 EGGFLLDLELLEAAKTPK-----TKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE-LVYDGEPPPALA 188 (350)
T ss_pred ccCCccCHHHHHhhcCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhh-ceeCCccccccc
Confidence 444443 4555554433 567766554 589999988774 3 6899999999999986 432 1 2
Q ss_pred CCCCCCCcEEEEccccCcCC-CCCceEEEEEeC
Q 021539 269 ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRR 300 (311)
Q Consensus 269 dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~ 300 (311)
.....+.|+++.|+|| ++| .+.++|++++++
T Consensus 189 ~~~~~~~~~~~~s~~K-~~~~~g~~~G~i~~~~ 220 (350)
T cd00609 189 LLDAYERVIVLRSFSK-TFGLPGLRIGYLIAPP 220 (350)
T ss_pred CcCccCcEEEEeeccc-ccCCcccceEEEecCH
Confidence 3455678999999999 665 234689999887
No 99
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.42 E-value=6.1e-12 Score=123.37 Aligned_cols=160 Identities=12% Similarity=-0.008 Sum_probs=115.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v 198 (311)
+.-....++.++.+|++.|. ++ +++|+|+++|+.+++.++ +++||+|+.. ..+.. ..+..++...++++..+
T Consensus 47 R~~~p~~~~le~~lA~l~g~--~~--v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~ 121 (382)
T TIGR02080 47 RSGNPTRDLLQQALAELEGG--AG--AVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV 121 (382)
T ss_pred CCCCchHHHHHHHHHHHhCC--Cc--EEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE
Confidence 33333456788899999995 33 999999999999999988 6789998743 33332 22344455556777766
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+. .+.+.++++++++ +++|.+. .+-+|.+.|+++|.+ ||++|+++++|.+++. +...-++ .+++
T Consensus 122 d~------~d~~~l~~ai~~~-----tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~pl-~~ga 188 (382)
T TIGR02080 122 DQ------GDEQALRAALAQK-----PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLS-PALQNPL-ALGA 188 (382)
T ss_pred CC------CCHHHHHHhcCcC-----ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCC
Confidence 42 2578888888764 4666653 336999999999966 6999999999999987 6543333 3578
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
|+++.|++| +++++.| .|++.+++
T Consensus 189 Divv~S~sK-~l~G~~~~~~G~i~~~~ 214 (382)
T TIGR02080 189 DLVLHSCTK-YLNGHSDVIAGAVIAKD 214 (382)
T ss_pred CEEEeecce-eccCCCCceeEEEEeCC
Confidence 999999999 5544766 66655543
No 100
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=5.9e-12 Score=123.72 Aligned_cols=159 Identities=12% Similarity=0.015 Sum_probs=115.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v 198 (311)
+.-....++.++++|++.|.. + +++|+|+++|+.+++.++ +++||+|+.. ..+.. ..+..++...|+++..+
T Consensus 48 R~~~pt~~~L~~~lA~l~g~~--~--~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v 122 (386)
T PRK08045 48 RRGNPTRDVVQRALAELEGGA--G--AVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV 122 (386)
T ss_pred CCCCccHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe
Confidence 333344568999999999962 3 999999999999998876 5789998744 34442 22344444556677765
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+. .+.++++++++++ +++|.+... -+|.++|+++|.+ ||++|+++++|.+++. +.....+ .+++
T Consensus 123 d~------~d~e~l~~~l~~~-----tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~-~~~~~pl-~~ga 189 (386)
T PRK08045 123 DQ------GDEQALRAALAEK-----PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLS-PALQNPL-ALGA 189 (386)
T ss_pred CC------CCHHHHHHhcccC-----CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCCch-hhCC
Confidence 32 3678888888764 466665432 5999999999966 6999999999999988 7554444 4689
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEe
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
|+++.|+|| ++|+|.+ .|+++.+
T Consensus 190 Divv~S~tK-~l~G~~d~~~G~vi~~ 214 (386)
T PRK08045 190 DLVLHSCTK-YLNGHSDVVAGVVIAK 214 (386)
T ss_pred CEEEeecce-eccCCCCceeEEEEeC
Confidence 999999999 5544766 5655554
No 101
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.42 E-value=1.9e-12 Score=130.13 Aligned_cols=170 Identities=14% Similarity=0.036 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--C-----CCC------CEEEEccCcChHHHHHHHHh
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--F-----FKG------NYYLTIISEESDYIKGFAAQ 190 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~-----~~G------d~Ils~~eh~~~~~~~la~~ 190 (311)
+....+++=.-+++++|++ ++..=+||+|+|||+.+.+.... | ..+ -+|+.+...|. ++...++.
T Consensus 99 a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~-s~~Kaa~~ 176 (460)
T COG0076 99 AAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHF-SFEKAARY 176 (460)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchh-HHHHHHHH
Confidence 3444568888999999997 45568999999999886543321 1 101 14655444332 24445566
Q ss_pred CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCce--EEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCc
Q 021539 191 KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKG--LFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED 266 (311)
Q Consensus 191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~--LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~ 266 (311)
.|+++..+|.+..+.++|.+++++++++.+ .. +|+.... .+|.+=||++|++ |+++++++|||||=.. ...
T Consensus 177 lG~~~~~v~~~~~~~~id~~~l~~~i~~~t----~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG-~~~ 251 (460)
T COG0076 177 LGLGLRRVPTVPTDYRIDVDALEEAIDENT----IGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGG-FLL 251 (460)
T ss_pred hCCCceeEEeccCccccCHHHHHHHHHhhc----cCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccc-eee
Confidence 799999988775468999999999999864 23 6665555 6999999999987 5999999999999665 545
Q ss_pred cc-------CCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 267 QL-------ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 267 pl-------dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
|+ |+..-++|.+++++|| |+..|.|+|++++|++
T Consensus 252 pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~ 292 (460)
T COG0076 252 PFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDE 292 (460)
T ss_pred cccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECH
Confidence 43 3444479999999999 5555999999999987
No 102
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=3.4e-12 Score=125.22 Aligned_cols=157 Identities=11% Similarity=-0.047 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~vp~~~ 202 (311)
...++.|+++|++.|++. .++|+ |+++|+.+++.++ +.+||+|++. ..+... .+....++.|+++..++.
T Consensus 61 p~~~~Le~~lA~~~g~~~---~i~~~-sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-- 133 (388)
T PRK07811 61 PTRTALEEQLAALEGGAY---GRAFS-SGMAATDCLLRAV-LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-- 133 (388)
T ss_pred ccHHHHHHHHHHHhCCCc---eEEeC-CHHHHHHHHHHHH-hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC--
Confidence 335689999999999853 36665 5689999999888 6899998754 333322 223333445887777654
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL 279 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~ 279 (311)
.+.++|+++++++ +++|.+. .+-+|.+.|+++|.+ ||++|+++++|.+++. +.....+. +++|+++
T Consensus 134 ----~d~e~l~~~i~~~-----tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~-~~~~~p~~-~gaDivv 202 (388)
T PRK07811 134 ----SDLDAVRAAITPR-----TKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFAS-PYLQQPLA-LGADVVV 202 (388)
T ss_pred ----CCHHHHHHhcCcC-----CeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCc-cccCCchh-hCCcEEE
Confidence 2678898888764 4676654 235899999999976 6999999999999998 75544443 5899999
Q ss_pred EccccCcCCCCCc--eEEEEEeCC
Q 021539 280 CTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 280 ~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
+|++| ++|+|.+ .|+++.+++
T Consensus 203 ~S~sK-~l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 203 HSTTK-YIGGHSDVVGGALVTNDE 225 (388)
T ss_pred ecCce-eecCCCCcEEEEEEECCH
Confidence 99999 6664754 577777643
No 103
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.42 E-value=6.8e-12 Score=122.64 Aligned_cols=162 Identities=11% Similarity=0.001 Sum_probs=115.5
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|++ . +++++|+++|+..++.++ +++||+|+.. ..|.. ..+..++++.|+++..
T Consensus 49 ~r~~~p~~~~le~~la~l~g~~--~--~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~ 123 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGAE--R--AVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSF 123 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEE
Confidence 3444445678999999999983 3 788999999999888877 5789998743 33432 2234455667999988
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ +.+++++.++++ +++|.+.. +.+|.+.|+++|.+ ||++|+++++|.+++. +...-.+ .++
T Consensus 124 v~~~------d~~~l~~~i~~~-----tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~-~~~~~pl-~~g 190 (380)
T TIGR01325 124 VDPT------DLNAWEAAVKPN-----TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT-PVLQQPL-KLG 190 (380)
T ss_pred ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence 8763 467888888654 46766643 25899999999966 6999999999999975 4322223 357
Q ss_pred CcEEEEccccCcCCCCC-ce-EEEEEeCC
Q 021539 275 PDLVLCTLDNNTHAQPL-KI-TCLLVRRK 301 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~-Gi-G~L~vr~~ 301 (311)
+|++++|++| ++|++. .+ |+++.+++
T Consensus 191 ~Divv~S~sK-~l~g~g~~~gG~vv~~~~ 218 (380)
T TIGR01325 191 ADVVVYSATK-HIDGQGRVMGGVIAGSEE 218 (380)
T ss_pred CCEEEeeccc-eecCCCCeEEEEEEeCHH
Confidence 9999999999 666352 24 55554544
No 104
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.42 E-value=3.6e-12 Score=123.30 Aligned_cols=163 Identities=18% Similarity=0.208 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC-C-C
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW-L-D 204 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~-~-~ 204 (311)
..+.|+.+|+++|+++++ |+||+|+|+|+++++.++ ..+|+.|+. ...+.. ....++..|+++..+|++. . +
T Consensus 68 ~~~lr~~ia~~l~~~~~~--v~~~~g~t~al~~~~~~~-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~ 142 (380)
T PRK06225 68 FPELRELILKDLGLDDDE--ALITAGATESLYLVMRAF-LSPGDNAVTPDPGYLI--IDNFASRFGAEVIEVPIYSEECN 142 (380)
T ss_pred hHHHHHHHHHhcCCCCCc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--hHHHHHHhCceEEeeccccccCC
Confidence 458999999999998764 999999999999999887 467888763 333321 2233456699999888642 1 3
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc---HHHHHH-HHHCCcEEEeccccc---CccCccc-CCCCCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS---MHWISE-AHRNAWHVLLDATGL---VFGEDQL-ALALHR 274 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P---i~~I~~-a~~~g~~vlvDAaQs---v~G~~pl-dl~~l~ 274 (311)
..++.+.+++.++++ ++++.+. .+ .||.++| +++|.+ |+++|+++++|.++. . +..++ .+. -+
T Consensus 143 ~~~d~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~-~~ 215 (380)
T PRK06225 143 YKLTPELVKENMDEN-----TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYA-PE 215 (380)
T ss_pred ccCCHHHHHhhcCCC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcC-CC
Confidence 468999999888764 4555543 23 6999887 455544 688999999999874 2 32221 111 13
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
..+++.|+.| ++| +.| +|+++.++++++
T Consensus 216 ~~i~~~s~SK-~~g-~~G~RiG~i~~~~~l~~ 245 (380)
T PRK06225 216 HTVTSYSFSK-IFG-MAGLRIGAVVATPDLIE 245 (380)
T ss_pred CEEEEeechh-hcC-CccceeEEEecCHHHHH
Confidence 3566678889 888 668 699998766543
No 105
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=8.6e-12 Score=123.33 Aligned_cols=160 Identities=13% Similarity=0.026 Sum_probs=113.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v 198 (311)
+......++.++++|++.|+. + -++++|+++|+++++.++ +++||+|+... .+.. ..++.+++..|+++..+
T Consensus 56 R~~~p~~~~Le~~lA~l~g~~-~---~v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v 130 (405)
T PRK08776 56 RSGNPTRDLLGEALAELEGGA-G---GVITATGMGAINLVLNAL-LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA 130 (405)
T ss_pred CCCChHHHHHHHHHHHHhCCC-c---eEEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE
Confidence 333334467889999999973 2 345666689999999888 68999987433 3332 12344455668887777
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+. .+.++|++.++++ +++|.+. ++-+|.+.|+++|.+ ||++|+++++|.+++. |...-.+ .+++
T Consensus 131 ~~------~d~~~l~~~i~~~-----tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~-~~~~~pl-~~ga 197 (405)
T PRK08776 131 DL------TDPRSLADALAQS-----PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLS-PALQKPL-EFGA 197 (405)
T ss_pred CC------CCHHHHHHhcCcC-----CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcc-cccCCcc-cccC
Confidence 54 2567888888754 4666553 336999999999966 6999999999999987 7543333 3689
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
|++++|+|| ++|+|.+ .|+++.++
T Consensus 198 Divv~S~tK-~l~g~~~~~~G~vv~~~ 223 (405)
T PRK08776 198 DLVLHSTTK-YINGHSDVVGGAVVARD 223 (405)
T ss_pred CEEEecCce-eecCCCCceEEEEEeCC
Confidence 999999999 5554755 46665543
No 106
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.41 E-value=7.1e-12 Score=123.47 Aligned_cols=159 Identities=8% Similarity=-0.047 Sum_probs=112.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v 198 (311)
+......++.++++|+++|++.. ++ +++++.|+..++.++ +++||+|+... .+... .+...+++.|+++..+
T Consensus 61 r~~~p~~~~Le~~lA~l~G~~~~---~~-~~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 135 (398)
T PRK07504 61 RYSNPTVDMFEKRMCALEGAEDA---RA-TASGMAAVTAAILCQ-VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV 135 (398)
T ss_pred cCCCchHHHHHHHHHHHhCCCee---eE-ecCHHHHHHHHHHHH-hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE
Confidence 33334456899999999999632 44 678888887666554 57899987433 33321 2334455678888887
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+. ++.++++++++++ +++|.+... -+|.+.|+++|.+ |+++|+++++|++|+. +...-.+ .+++
T Consensus 136 d~------~d~e~l~~ai~~~-----tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~-~~~~~~~-~~ga 202 (398)
T PRK07504 136 DG------LDLDNWEKAVRPN-----TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT-PLFQKPL-ELGA 202 (398)
T ss_pred CC------CCHHHHHHhcCcC-----ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc-cccCCch-hhCC
Confidence 52 4788899988765 567766433 5899999999976 6999999999999987 6543333 4689
Q ss_pred cEEEEccccCcCCCCC-ceEEEEEe
Q 021539 276 DLVLCTLDNNTHAQPL-KITCLLVR 299 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~-GiG~L~vr 299 (311)
|++++|+|| ++|+|. .+|.+++.
T Consensus 203 Divv~S~sK-~l~g~g~~~GG~vv~ 226 (398)
T PRK07504 203 HIVVYSATK-HIDGQGRCLGGVVLS 226 (398)
T ss_pred CEEEeeccc-cccCCccceEEEEEe
Confidence 999999999 665452 36655544
No 107
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.41 E-value=6e-12 Score=123.51 Aligned_cols=158 Identities=13% Similarity=0.018 Sum_probs=111.8
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v 198 (311)
+......++.++.+|+++|++ + ++.|++++.|+..++.++ +++||+|++.. .|.. ..++.+ +..|+++..+
T Consensus 49 r~~np~~~~lE~~lA~l~g~~--~--~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~ 122 (385)
T PRK08574 49 REENPTLRPLEEALAKLEGGV--D--ALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLA 122 (385)
T ss_pred CCCCccHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEE
Confidence 333334568999999999973 3 566788899999988876 67899987544 3432 223332 5568888765
Q ss_pred eCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
.. +.+++++++++ + +++|.+... -+|.++|+++|.+ ||++|+++++|.+|+. |...-.+ .++
T Consensus 123 ~~-------d~~~l~~~i~~~~-----tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~G 188 (385)
T PRK08574 123 YP-------STEDIIEAIKEGR-----TKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFAT-PLLYRPL-RHG 188 (385)
T ss_pred CC-------CHHHHHHhcCccC-----ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhC
Confidence 32 45778888875 3 567776533 4899999999966 6999999999999987 7432223 468
Q ss_pred CcEEEEccccCcCCCCCc-e-EEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK-I-TCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G-i-G~L~vr~ 300 (311)
+|++++|++| ++|+|.+ + |+++.++
T Consensus 189 aDivv~S~sK-~l~g~~d~~gG~vi~~~ 215 (385)
T PRK08574 189 ADFVVHSLTK-YIAGHNDVVGGVAVAWS 215 (385)
T ss_pred CcEEEeeCce-eecCCCCceeEEEEECc
Confidence 9999999999 6654754 3 4455543
No 108
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=7.3e-12 Score=123.28 Aligned_cols=161 Identities=13% Similarity=0.028 Sum_probs=117.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~ 197 (311)
++......++.++.+|+++|++ . +++|+|+|+|+++++.++ +++||+|++ ...|... .+..+++..|+++..
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g~~--~--~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~ 134 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEGGR--H--ALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRF 134 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCCC--e--EEEeccHHHHHHHHHHHH-hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence 4444555678889999999973 3 999999999999999888 689999874 3344422 233455667999888
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.. +.+++++.++++ +++|.+.. +.+|.+.++++|.+ ||++|+++++|++|+. |.. .+--+++
T Consensus 135 vd~~------~~~~l~~~i~~~-----tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~-~~~-~~~l~~G 201 (394)
T PRK07050 135 YDPL------IGAGIADLIQPN-----TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA-GLA-FKPFEHG 201 (394)
T ss_pred ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc-ccc-cCHHHcC
Confidence 7643 236788888765 56776643 35899999999976 6999999999999998 753 2323357
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+|+++.|+.| ++++..+ .|+++.++
T Consensus 202 aDi~v~S~tK-~~~g~~~~~gG~v~~~~ 228 (394)
T PRK07050 202 VDISVQALTK-YQSGGSDVLMGATITAD 228 (394)
T ss_pred CeEEEEECCc-eecCCCCeeEEEEEECC
Confidence 8999999999 5543434 45566543
No 109
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.41 E-value=8.4e-12 Score=121.22 Aligned_cols=161 Identities=10% Similarity=-0.038 Sum_probs=117.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++......++.++++|+++|+. + .++++++++|+.+++.++ .++||+|++. ..|+. ..+...++..|+++..
T Consensus 35 ~r~~~p~~~~le~~la~l~g~~--~--a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 35 SRIGNPTVDALEKKLAALEGGE--A--ALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred ECCCChhHHHHHHHHHHHHCCC--C--EEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 4444455668889999999973 3 677788899999998887 5689998643 44552 2234445567988888
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+ +.++++++++++ +++|.+... -+|.+.|+++|.+ ||++|+++++|.+++. |... ..-.++
T Consensus 110 v~~~------d~~~l~~~i~~~-----~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~-~~~~-~~~~~g 176 (369)
T cd00614 110 VDPD------DPEALEAAIKPE-----TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFAT-PYLQ-RPLELG 176 (369)
T ss_pred eCCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-hhcC-ChhhhC
Confidence 8764 367888888754 567766533 5899999999966 6999999999999988 7542 222358
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+|++++|++| .+|+|.. .|+++.++
T Consensus 177 ~Divv~S~tK-~l~g~~~~~gG~v~~~~ 203 (369)
T cd00614 177 ADIVVHSATK-YIGGHSDVIAGVVVGSG 203 (369)
T ss_pred CcEEEeccce-eccCCCCceEEEEEeCc
Confidence 9999999999 6664532 67777765
No 110
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.40 E-value=8.9e-12 Score=123.07 Aligned_cols=160 Identities=13% Similarity=-0.020 Sum_probs=117.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v 198 (311)
+.-....++.++++|++.|++ + .++++|++.|+..++.++ +.+||+|++.. .+... .+...++..|+++.++
T Consensus 66 r~~~p~~~~le~~lA~l~g~~--~--al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v 140 (403)
T PRK07810 66 RYGNPTVSMFEERLRLIEGAE--A--CFATASGMSAVFTALGAL-LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV 140 (403)
T ss_pred CCCCchHHHHHHHHHHHhCCC--c--EEEECChHHHHHHHHHHH-hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE
Confidence 333344568899999999974 3 788888899998887776 57899987543 33322 2344556679999988
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+ +.++++++++++ +++|.+. .+.+|.+.|+++|.+ ||++|+++++|.+++. |...-.+ .+++
T Consensus 141 d~~------d~~~l~~ai~~~-----tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~~~-~~ga 207 (403)
T PRK07810 141 DGE------DLSQWEEALSVP-----TQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFAT-PLLQRGL-PLGA 207 (403)
T ss_pred CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hcCC
Confidence 652 678898888765 4666553 336999999999966 6999999999999997 7553333 3589
Q ss_pred cEEEEccccCcCCCCCc---eEEEEEeCC
Q 021539 276 DLVLCTLDNNTHAQPLK---ITCLLVRRK 301 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G---iG~L~vr~~ 301 (311)
|++++|++| ++|++ | .|+++.+++
T Consensus 208 Divv~S~tK-~l~g~-g~~~gG~v~~~~~ 234 (403)
T PRK07810 208 DVVVYSGTK-HIDGQ-GRVLGGAILGDRE 234 (403)
T ss_pred cEEEccCCc-eecCC-cCceeEEEEeChH
Confidence 999999999 77634 5 466665554
No 111
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.40 E-value=9.1e-12 Score=122.07 Aligned_cols=158 Identities=9% Similarity=-0.040 Sum_probs=111.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~v 198 (311)
+......++.++++|++.|+. . .++++|++.|+++++.. +++||+|+.. ..+... .+...+...|+++.++
T Consensus 46 r~~~p~~~~Le~~la~l~g~~--~--al~~~SG~~Al~~~l~~--l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v 119 (380)
T PRK06176 46 RSGNPTRFALEELIADLEGGV--K--GFAFASGLAGIHAVFSL--FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII 119 (380)
T ss_pred CCCChhHHHHHHHHHHHhCCC--C--EEEECCHHHHHHHHHHH--cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc
Confidence 333334567888999999974 2 34556667899877753 4789998743 334322 2344456678888887
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.. +.++++++++++ +++|.+ +.+.+|.+.|+++|.+ ||++|+++++|.+++. +....++ .+++
T Consensus 120 d~~------d~e~l~~ai~~~-----t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~-~~~~~p~-~~ga 186 (380)
T PRK06176 120 DTS------DLSQIKKAIKPN-----TKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT-PYYQNPL-LLGA 186 (380)
T ss_pred CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCC
Confidence 642 578888888764 567665 3336999999999966 6999999999999997 6554444 4689
Q ss_pred cEEEEccccCcCCCCCc-eEE-EEEe
Q 021539 276 DLVLCTLDNNTHAQPLK-ITC-LLVR 299 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G-iG~-L~vr 299 (311)
|++++|++| ++|+|.. +|. ++.+
T Consensus 187 Divv~S~tK-~l~g~~d~~gG~vv~~ 211 (380)
T PRK06176 187 DIVVHSGTK-YLGGHSDVVAGLVTTN 211 (380)
T ss_pred CEEEecCce-eccCCccceeeEEEec
Confidence 999999999 6654753 444 4443
No 112
>PLN02590 probable tyrosine decarboxylase
Probab=99.40 E-value=2.4e-11 Score=124.32 Aligned_cols=194 Identities=9% Similarity=-0.048 Sum_probs=125.0
Q ss_pred cchhHHHHhcC---CC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHHhc---CCCC--
Q 021539 105 EPSRLLDILSK---KT--SFK-GNFISIPEIQARNRALKHCGLSED-----EYLVLFVPNYKEAMLMIGES---YPFF-- 168 (311)
Q Consensus 105 ~~~~l~~~l~~---~s--s~~-G~~~~~~le~aR~~IA~~Lga~~d-----ey~VvFTsnaTealnlv~~s---~~~~-- 168 (311)
.++-+-|++.. .. ++. +..++.++.++-+-+++++|.+.+ ...=+||+|+|+|+.+.+.. ...+
T Consensus 143 ~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~ 222 (539)
T PLN02590 143 VAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKV 222 (539)
T ss_pred HHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhh
Confidence 45567777632 22 332 445555667899999999999753 12368999999997653222 1000
Q ss_pred --CC--CEEE-EccCcChHHHHHHHHhCCc---EEEEEeCCC-CCcccCHHHHHhhhhccCCCC-CceEEEEecc--ccc
Q 021539 169 --KG--NYYL-TIISEESDYIKGFAAQKES---KVIAAPETW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPVV--VNG 236 (311)
Q Consensus 169 --~G--d~Il-s~~eh~~~~~~~la~~~G~---~V~~vp~~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~~--~tG 236 (311)
.+ +-++ +...-|. ++...++-.|+ .|+.||++. .+++++.+.|++.|++..... ..-+|+.++- .+|
T Consensus 223 g~~~~~~~vvy~S~~aH~-Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG 301 (539)
T PLN02590 223 GKTLLPQLVVYGSDQTHS-SFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA 301 (539)
T ss_pred cccCCCCEEEEecCCchH-HHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence 11 2233 3332232 34444444566 588899874 257899999999997532111 1223333332 699
Q ss_pred chhcHHHHHH-HHHCCcEEEecccccCccCcccC-----C-CCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 237 TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-----L-ALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 237 ~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-----l-~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
.+=||++|+. |+++|+++|||||-.. .....+ + .-..+|.+++++|| |++.|.++|+|++|+.
T Consensus 302 aiDpl~~Ia~i~~~~g~WlHVDaA~GG-~al~~~~~r~~~~Gie~ADSit~D~HK-~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 302 AVDPLVPLGNIAKKYGIWLHVDAAYAG-NACICPEYRKFIDGIENADSFNMNAHK-WLFANQTCSPLWVKDR 371 (539)
T ss_pred ccCCHHHHHHHHHHhCCeEEEecchhh-hhhcChhhHHHhcCCccCCEEEECchh-hcCcCcCEEEEEecCH
Confidence 9999999977 6999999999998775 332221 1 11358999999999 5545999999999975
No 113
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.39 E-value=7.2e-12 Score=122.68 Aligned_cols=159 Identities=11% Similarity=0.002 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHHHHHHhCCcEEEEEeCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~~la~~~G~~V~~vp~~~ 202 (311)
...++.++.+|+++|+. + .++++|++.|+..++.++ +++||+|++... |.. ..+..+++..|+++..++..
T Consensus 61 pt~~~Le~~lA~l~G~~--~--al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~- 134 (386)
T PRK06767 61 PTVKLFEERMAVLEGGE--E--ALAFGSGMAAISATLIGF-LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME- 134 (386)
T ss_pred cchHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC-
Confidence 33567899999999973 2 556667778998888777 578999875433 332 22334445567777666442
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL 279 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~ 279 (311)
+.++++++++++ +++|.+.. +-+|.+.|+++|.+ ||++|+.+++|.+++. +....++. .++|+++
T Consensus 135 -----d~~~l~~~i~~~-----tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~pl~-~g~Div~ 202 (386)
T PRK06767 135 -----TEADIENKIRPN-----TKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCS-PYLQRPLE-LGCDAVV 202 (386)
T ss_pred -----CHHHHHHhhCcC-----ceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcc-cccCCchh-cCCcEEE
Confidence 567888888764 56776643 35999999999966 6999999999999987 65555553 5899999
Q ss_pred EccccCcCCCCCc--eEEEEEeCCCC
Q 021539 280 CTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 280 ~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+|++| ++|++.+ .|+++.+++.+
T Consensus 203 ~S~sK-~l~g~g~~~gG~v~~~~~~i 227 (386)
T PRK06767 203 HSATK-YIGGHGDVVAGVTICKTRAL 227 (386)
T ss_pred ecCcc-eecCCCCceeEEEEeChHHH
Confidence 99999 6664643 57787776543
No 114
>PRK05968 hypothetical protein; Provisional
Probab=99.39 E-value=8.3e-12 Score=122.53 Aligned_cols=158 Identities=9% Similarity=-0.048 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~ 201 (311)
....++.++++|+++|++ +.++| +++|.|+.+++.++ +++||+|++ ...|... .+...++..|+++.+++.+
T Consensus 62 ~p~~~~le~~lA~l~g~~---~av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 136 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAE---DARGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR 136 (389)
T ss_pred ChhHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC
Confidence 344678999999999995 23555 56678998877765 578999864 4444422 2344556679999888653
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV 278 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl 278 (311)
+.+++++++ ++ +++|.+... .++.+.|+++|.+ ||++|+++++|++++. +...-.+ .+++|++
T Consensus 137 ------d~~~l~~~i-~~-----tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~-~~~~~p~-~~g~Div 202 (389)
T PRK05968 137 ------DEEAVAKAL-PG-----AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWAS-PVFQRPI-TLGVDLV 202 (389)
T ss_pred ------CHHHHHHhc-cc-----CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-hhccCch-hcCCcEE
Confidence 567888777 33 467766433 4778889999966 6999999999999988 7432223 3588999
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
++|++| ++++|.+ .|+++.+++.
T Consensus 203 v~S~tK-~l~g~~~~~gG~i~~~~~~ 227 (389)
T PRK05968 203 IHSASK-YLGGHSDTVAGVVAGSKEH 227 (389)
T ss_pred Eeeccc-cccCCCCeEEEEEEECHHH
Confidence 999999 6665755 5777666543
No 115
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.39 E-value=9.9e-12 Score=121.79 Aligned_cols=176 Identities=17% Similarity=0.043 Sum_probs=113.9
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHHhcC-----------CCC-CCCE-EE-EccCcChH
Q 021539 122 NFISIPEIQARNRALKHCGLSED-----EYLVLFVPNYKEAMLMIGESY-----------PFF-KGNY-YL-TIISEESD 182 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~d-----ey~VvFTsnaTealnlv~~s~-----------~~~-~Gd~-Il-s~~eh~~~ 182 (311)
..++.++.++-+-+++++|.+.+ +-.=+||+|+|+|+...+... ... .++- ++ |...|.+
T Consensus 75 P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S- 153 (373)
T PF00282_consen 75 PAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS- 153 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH-
T ss_pred cccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH-
Confidence 33444556899999999999722 234789999999986433211 000 1122 33 4444543
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCce-EEEEecc--cccchhcHHHHHH-HHHCCcEEEecc
Q 021539 183 YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKG-LFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDA 258 (311)
Q Consensus 183 ~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~-LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDA 258 (311)
+...+.-.|+.++.||++. +++++.++|++.+.+......+. +|+.++- .+|.+=|+++|.+ ++++++++||||
T Consensus 154 -~~Kaa~~lGlg~~~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDa 231 (373)
T PF00282_consen 154 -IEKAARILGLGVRKIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDA 231 (373)
T ss_dssp -HHHHHHHTTSEEEEE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEE
T ss_pred -HHHhcceeeeEEEEecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecc
Confidence 4445566799999999986 78999999998887532111122 2333322 5999999999977 589999999999
Q ss_pred cccCccCc------ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 259 TGLVFGED------QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 259 aQsv~G~~------pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+-.. ... +....-.++|-+++++|| |++.|.++|++++|++.
T Consensus 232 A~gg-~~~~~~~~~~~~~gi~~adSit~d~HK-~l~~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 232 AYGG-SALLSPEYRHLLFGIERADSITIDPHK-WLGVPYGCGVLLVRDKS 279 (373)
T ss_dssp TTGG-GGGGHCTTGGGGTTGGGESEEEEETTT-TTS-SSS-EEEEESSGG
T ss_pred cccc-cccccccccccccccccccccccchhh-hhcCCccceeEEeeccc
Confidence 7654 211 222333469999999999 66669999999999864
No 116
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.38 E-value=9.1e-12 Score=122.43 Aligned_cols=162 Identities=8% Similarity=-0.043 Sum_probs=117.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v 198 (311)
+......++.++++|+++|+. . .++++|++.|+.+++.++ +.+||+|++.. .|.. ..+...+...|+++.++
T Consensus 55 r~~~p~~~~le~~lA~l~g~~--~--av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v 129 (391)
T TIGR01328 55 RLGNPTVSNLEGRIAFLEGTE--A--AVATSSGMGAIAATLLTI-LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI 129 (391)
T ss_pred CCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE
Confidence 333334567888999999984 2 677888889998888777 57899987443 3332 22344456679998888
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+ +.++++++++++ +++|.+. .+-+|.+.|+++|.+ ||++|+++++|.+++. +...-.+ .+++
T Consensus 130 d~~------d~e~l~~~i~~~-----tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~~~-~~g~ 196 (391)
T TIGR01328 130 NMA------IPEEVKAHIKDN-----TKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT-PMLTNPV-ALGV 196 (391)
T ss_pred CCC------CHHHHHHhhccC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch-hccCCch-hcCC
Confidence 764 577888888764 5676653 235999999999976 6999999999999987 7554444 3589
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
|++++|++| ++|+|.+ .|+++.+++.
T Consensus 197 Divv~S~sK-~lgg~g~~~gG~v~~~~~l 224 (391)
T TIGR01328 197 DVVVHSATK-YIGGHGDVVAGLICGKAEL 224 (391)
T ss_pred CEEEccccc-cccCCCCceEEEEEcCHHH
Confidence 999999999 7775643 4666655543
No 117
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.38 E-value=2.8e-11 Score=117.18 Aligned_cols=173 Identities=11% Similarity=0.075 Sum_probs=115.5
Q ss_pred hhHHHHhcCCCCcc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH
Q 021539 107 SRLLDILSKKTSFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI 184 (311)
Q Consensus 107 ~~l~~~l~~~ss~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~ 184 (311)
..+.+.+....-.. |... ++-.+++++++|+. . ++.|+|+|.|+.+++.++.+++|++|+ +.+... ..+
T Consensus 9 ~~v~~~l~s~~~~~~g~~~----~~fE~~~a~~~g~~--~--~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~-~~~ 79 (363)
T PF01041_consen 9 DAVLEVLRSGWLSTYGPYV----EEFEKEFAEYFGVK--Y--AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP-ATA 79 (363)
T ss_dssp HHHHHHHHHTCCSSSSHHH----HHHHHHHHHHHTSS--E--EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T-HHH
T ss_pred HHHHHHHHhCCccCCCHHH----HHHHHHHHHHhCCC--e--EEEeCChhHHHHHHHHhcCCCcCceEecCCCcch-HHH
Confidence 34556664432222 4444 46777899999973 2 899999999999999999888999986 444433 222
Q ss_pred HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539 185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF 263 (311)
Q Consensus 185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~ 263 (311)
.. ....|+++++++++..++.+|++.++++++++ ++.|.+.| ..|...++++|.+ |+++|+.++-||+|++
T Consensus 80 ~a-i~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-----t~ai~~~h-~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~- 151 (363)
T PF01041_consen 80 SA-ILWAGAEPVFVDIDPETLNIDPEALEKAITPK-----TKAILVVH-LFGNPADMDAIRAIARKHGIPLIEDAAQAF- 151 (363)
T ss_dssp HH-HHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-----EEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTT-
T ss_pred HH-HHHhccEEEEEeccCCcCCcCHHHHHHHhccC-----ccEEEEec-CCCCcccHHHHHHHHHHcCCcEEEcccccc-
Confidence 22 23469999999998768999999999999976 45555554 4899999999966 7999999999999999
Q ss_pred cCcccC--CCCCCCcEEEEccc--cCcCCCCCce-EEEEEeC
Q 021539 264 GEDQLA--LALHRPDLVLCTLD--NNTHAQPLKI-TCLLVRR 300 (311)
Q Consensus 264 G~~pld--l~~l~~Dfl~~S~H--K~l~G~P~Gi-G~L~vr~ 300 (311)
|..--. +.. --|+.+||+| | .+. .|- |+++.++
T Consensus 152 g~~~~g~~~G~-~gd~~~fSf~~~K-~i~--~geGG~v~~~~ 189 (363)
T PF01041_consen 152 GARYKGRPVGS-FGDIAIFSFHPTK-IIT--TGEGGAVVTND 189 (363)
T ss_dssp T-EETTEETTS-SSSEEEEESSTTS-SS---SSS-EEEEEST
T ss_pred CceeCCEeccC-CCCceEecCCCCC-CCc--CCCCeeEEecH
Confidence 853222 222 2499999997 7 553 344 5555543
No 118
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.37 E-value=1.4e-11 Score=120.05 Aligned_cols=148 Identities=14% Similarity=0.047 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC-hH-HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE-SD-YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~-~~-~~~~la~~~G~~V~~vp~~~~ 203 (311)
...+.++++|++. . ++ .++++|+++|++.++.++ +++||+|++.. .+. .. ..+...++.|+++..++.+.
T Consensus 52 ~~~~Le~~lA~l~--~-~~--~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~- 124 (366)
T PRK07582 52 TWRALEAALGELE--G-AE--ALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG- 124 (366)
T ss_pred cHHHHHHHHHHHc--C-CC--EEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC-
Confidence 3457888899998 2 23 666777789999998887 68999987543 333 11 12233455799999998753
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccccc--CccCcccCCCCCCCcEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGL--VFGEDQLALALHRPDLV 278 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQs--v~G~~pldl~~l~~Dfl 278 (311)
+. + .+.++ ++||.+... -+|.+.|+++|.+ ||++|+.++||++++ . |..|++ +++|++
T Consensus 125 ~~----~----~~~~~-----t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~-~~~p~~---~g~Div 187 (366)
T PRK07582 125 MA----E----AALAG-----ADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL-GQRPLE---LGADLV 187 (366)
T ss_pred hH----H----HhccC-----ceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc-ccCchh---cCCcEE
Confidence 11 1 12222 467665422 4899999999966 699999999999975 5 767776 478999
Q ss_pred EEccccCcCCCCCce--EEEEEe
Q 021539 279 LCTLDNNTHAQPLKI--TCLLVR 299 (311)
Q Consensus 279 ~~S~HK~l~G~P~Gi--G~L~vr 299 (311)
+.|+|| ++++|.|+ |+++.+
T Consensus 188 v~S~sK-~l~G~~g~~~G~v~~~ 209 (366)
T PRK07582 188 VASDTK-ALTGHSDLLLGYVAGR 209 (366)
T ss_pred Eecccc-cccCCCCeeEEEEEcC
Confidence 999999 55448784 777765
No 119
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.37 E-value=8.2e-12 Score=122.19 Aligned_cols=169 Identities=16% Similarity=0.132 Sum_probs=124.6
Q ss_pred CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEE--EEccCcChHHHHHHHHhCCcE
Q 021539 118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYY--LTIISEESDYIKGFAAQKESK 194 (311)
Q Consensus 118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~I--ls~~eh~~~~~~~la~~~G~~ 194 (311)
|+.+......++++++.+-++|+++ ++|.|+|.+ |+|.++..+..++ +.+|+.+ +...++.+..+...+++.| +
T Consensus 41 sHRs~~F~~i~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~~~ea~~~Nl-l~~g~~~~~~~~tG~fg~r~~~ea~~~g-~ 117 (364)
T PRK12462 41 SHRSSWFSSLLAQAEADLRDLLGIP-DEYGVVFLQGGSSLQFSMIPMNF-SRPGAAAPEYVTTGYWSRKAIGEASRVA-A 117 (364)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEeccHHHHHHHHHHHc-CCCCCcEEEEEeCCHHHHHHHHHHHhcC-C
Confidence 5567777888899999999999995 567788776 5999999998887 3567744 3445555666666666666 5
Q ss_pred EEEEeCCCC---CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccC
Q 021539 195 VIAAPETWL---DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLA 269 (311)
Q Consensus 195 V~~vp~~~~---~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld 269 (311)
|..+...+. ...++.++++ +.++ ...|.++++ ++|+.+| ++ .+.+++++++|++.++ |..|+|
T Consensus 118 v~~~~~~~~~~~~~~p~~~~~~--~~~d-----~~~v~~t~NETstGv~~~--~~--~~~~~~llvvD~sS~~-~s~pid 185 (364)
T PRK12462 118 MRVVWDGAASGYRTLPSLAELD--WDAR-----APFRHYVSNETVEGLQFP--DA--AGLPDSPLIADMSSDF-MSRPFD 185 (364)
T ss_pred ceEecCcCCCCCCcCCCHHHhc--cCCC-----CcEEEEccCCCCceEecC--cc--cccCCCeEEEEcCchh-hCCCCC
Confidence 555432111 1233444431 1222 457888888 6899997 22 2335899999999999 999999
Q ss_pred CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
++++ |.+.++.+| -+| |.|++++++|+++++.
T Consensus 186 ~~~~--dvi~agsQK-nlg-P~Gltvvivs~~al~~ 217 (364)
T PRK12462 186 VEAY--GMVYAHAQK-NLG-PAGVTVAIIRRALLER 217 (364)
T ss_pred hHHc--cEEEeeccc-cCC-CCceEEEEECHHHHhh
Confidence 9976 999999999 889 9999999999988765
No 120
>PRK06460 hypothetical protein; Provisional
Probab=99.36 E-value=1.2e-11 Score=121.02 Aligned_cols=163 Identities=12% Similarity=-0.001 Sum_probs=113.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-h-HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-S-DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-~-~~~~~la~~~G~~V~~ 197 (311)
++......++.|+++|+++|+.. .++|++| ++|++.++.++ +++||+|+.... +. . ..+...++..|+++..
T Consensus 40 ~r~~~p~~~~L~~~lA~l~g~~~---~v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 40 SREANPTVLELTKKIVELENAEM---GVAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred eCCCCccHHHHHHHHHHHhCCCc---EEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 56666667899999999999952 4888665 68999988877 578999875321 11 1 1233445667999988
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.+. .+.+++.++++ +++|.+... -+|.++|+++|.+ ||++|+++++|.+++. +.....+ ..+
T Consensus 115 ~~~~~------~~~l~~~~~~~-----tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~-~~~~~~l-~~~ 181 (376)
T PRK06460 115 SNPGS------DNIIEKAKSKR-----YDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFST-PINQKPL-ELG 181 (376)
T ss_pred ECCCC------HHHHHHhcCCC-----ceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCc-cccCChh-hcC
Confidence 87642 23344444433 567766543 5999999999966 6999999999999987 6322222 357
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+|+++.|++| ++|++.| .|+++.++++
T Consensus 182 ~divv~S~sK-~l~G~~~~~~G~~~~~~~l 210 (376)
T PRK06460 182 ADIVVHSASK-FLAGHNDVIAGLAAGYGKL 210 (376)
T ss_pred CCEEEeecce-eccCCCCceEEEEecCHHH
Confidence 8999999999 6764543 6777665543
No 121
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.36 E-value=5.6e-11 Score=118.73 Aligned_cols=159 Identities=10% Similarity=0.065 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEE
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKGNYYLT-IISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~v 198 (311)
..+-++.+|+++|++ . +++|+|+|+|+.+++.++ .+.+||+|++ ..+|... . ......|++++++
T Consensus 65 ~~~fe~~lA~~~g~~--~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~-~-~~v~~~G~~pv~v 138 (438)
T PRK15407 65 NDAFEKKLAEFLGVR--Y--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTT-V-NPIIQNGLVPVFV 138 (438)
T ss_pred HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHH-H-HHHHHcCCEEEEE
Confidence 347889999999984 3 899999999999888765 4578999864 4454422 2 1223468999999
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccC--CCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--LALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l~~l~~ 275 (311)
+++..+..+|.+.+++.+.++ +++|.+.+ ..|...++++|.+ |+++|+++++|++|++ |...-+ +..++
T Consensus 139 dvd~~~~~id~~~le~~i~~~-----tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~-G~~~~g~~~G~~g- 210 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPK-----TKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDAL-GSTYDGRMTGTFG- 210 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcC-----CeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccch-hhhcCCeeeeccC-
Confidence 887546678999999988764 56666655 3888899999966 6999999999999999 976644 33343
Q ss_pred cEEEEccccC--cCCCCCceEEEEEeCCC
Q 021539 276 DLVLCTLDNN--THAQPLKITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~--l~G~P~GiG~L~vr~~~ 302 (311)
|+.+||+|.. +-.++ | |+|+.+++.
T Consensus 211 d~~~fSf~~~k~~~~ge-G-G~l~t~d~~ 237 (438)
T PRK15407 211 DIATLSFYPAHHITMGE-G-GAVFTNDPL 237 (438)
T ss_pred ceEEEeCCCCCCccccC-c-eEEEECCHH
Confidence 9999998842 43323 5 788876543
No 122
>PLN02509 cystathionine beta-lyase
Probab=99.34 E-value=3.7e-11 Score=121.02 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~vp~~~~ 203 (311)
..++..+.+|++.|.. + ++++++++.++.++.. + +++||+|+.. ..+.. ..+.....+.|+++..++..
T Consensus 134 t~~aLE~~lA~leg~e---~-ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~-- 205 (464)
T PLN02509 134 TRDALESLLAKLDKAD---R-AFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-- 205 (464)
T ss_pred HHHHHHHHHHHHhCCC---E-EEEeCcHHHHHHHHHH-H-hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC--
Confidence 3567778889998863 2 4444555788876664 3 5789998743 33432 12334455679988877532
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
+.++++++++++ +++|.+... -+|.+.|+++|.+ ||++|+++++|.||+. |....++ .+++|++++
T Consensus 206 ----d~e~l~~ai~~~-----TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~-~~~~~pl-~~gaDivv~ 274 (464)
T PLN02509 206 ----NLDEVAAAIGPQ-----TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMS-PVLSRPL-ELGADIVMH 274 (464)
T ss_pred ----CHHHHHHhCCcC-----CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccc-cccCChh-hcCCcEEEe
Confidence 568888888764 567766544 5899999999966 6999999999999998 8654444 368999999
Q ss_pred ccccCcCCCCCc--eEEEEEeCC
Q 021539 281 TLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 281 S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
|++| ++++|.+ .|+++++++
T Consensus 275 S~tK-~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 275 SATK-FIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred cCcc-cccCCCccceeEEEeccH
Confidence 9999 5554766 677777654
No 123
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.33 E-value=1.7e-11 Score=117.57 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=113.6
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
.+.|+.+|+++|+++++ |++|+|+++++++++.++ +++|+.|+... +.-......++..|+++..+|.+ +..++
T Consensus 70 ~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~l-~~~gd~vl~~~-p~y~~~~~~~~~~g~~~~~~~~~--~~~~~ 143 (367)
T PRK02731 70 FELKAALAEKFGVDPER--IILGNGSDEILELLARAY-LGPGDEVIYSE-HGFAVYPIAAQAVGAKPVEVPAK--DYGHD 143 (367)
T ss_pred HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEec-CCHHHHHHHHHHcCCeEEEeccc--CCCCC
Confidence 47999999999997654 999999999999999887 56889886432 11122233345679999998884 45689
Q ss_pred HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH--CCcEEEecccccCccC------cccCCCCC-CCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVFGE------DQLALALH-RPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G~------~pldl~~l-~~D 276 (311)
.+++++.++++ +++|.++.. -||.++|.+++.+ ++. +|+++++|.++.. .. ..+++-.. .-.
T Consensus 144 ~~~l~~~~~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 144 LDAMLAAVTPR-----TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAE-YVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred HHHHHHHhCCC-----CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHH-hccCcCcccHHHHHhhcCCE
Confidence 99999888754 466666533 5999999999966 444 4899999999763 21 11221111 224
Q ss_pred EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+++.|+-| .|| ..| +|+++.+++..
T Consensus 218 i~~~S~SK-~~g-~~G~RiG~l~~~~~~~ 244 (367)
T PRK02731 218 VVTRTFSK-AYG-LAGLRVGYGIAPPEII 244 (367)
T ss_pred EEEeeehH-hhc-CcccceeeeeCCHHHH
Confidence 55667789 887 446 69999887554
No 124
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.33 E-value=3.3e-11 Score=121.11 Aligned_cols=173 Identities=10% Similarity=0.031 Sum_probs=118.2
Q ss_pred cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCc
Q 021539 114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKES 193 (311)
Q Consensus 114 ~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~ 193 (311)
...+.|.+..-. .+.|+.|+++++.. . |++|+|+|+|++++..++ +++|| |+...-|.... ....+..|.
T Consensus 69 ~g~~~Y~~~~g~---~~Lreaia~~~~~~--~--vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~~-~~~i~~~G~ 138 (460)
T PRK13238 69 RGDEAYAGSRSY---YRLEDAVKDIFGYP--Y--TIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDTT-RAHIELNGA 138 (460)
T ss_pred hCCcccCCCCCH---HHHHHHHHHHhCCC--c--EEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccch-HHHHHHcCC
Confidence 445667655432 46888999999973 3 999999999999998887 68999 65433343221 122334689
Q ss_pred EEEEEeCCCC---------CcccCHHHHHhhhhccCCCCCceEEEEe--ccccc-chhcH---HHHHH-HHHCCcEEEec
Q 021539 194 KVIAAPETWL---------DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNG-TRYSM---HWISE-AHRNAWHVLLD 257 (311)
Q Consensus 194 ~V~~vp~~~~---------~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG-~i~Pi---~~I~~-a~~~g~~vlvD 257 (311)
+++.+|.+.. .|.+|.++|++.+.++.. .++++|.+. ++.+| ...+. ++|.+ |+++|++++.|
T Consensus 139 ~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~-~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D 217 (460)
T PRK13238 139 TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA-ENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID 217 (460)
T ss_pred EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC-CceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 9999887521 355999999999985311 125666654 34565 77665 45655 68999999999
Q ss_pred ccccCcc-----------CcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 258 ATGLVFG-----------EDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 258 AaQsv~G-----------~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
++|.. + ....++.+ .-.|++++|+||+.+| |.| |+++.++
T Consensus 218 aa~~~-e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d 274 (460)
T PRK13238 218 AARFA-ENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRD 274 (460)
T ss_pred Ccchh-hhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcCh
Confidence 99965 3 22333321 2489999999994445 876 8877774
No 125
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.32 E-value=1.5e-10 Score=116.00 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHH-HHHHHHHhcCCCC--CCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYK-EAMLMIGESYPFF--KGNYYL-TIISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaT-ealnlv~~s~~~~--~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
.....+....+++++|++.-+ ..++++++| .++.+++.++..+ +|+.|+ +...|. ...+ .+...|++.++++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~-S~~k-Ai~~~G~~pv~Vd~ 180 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQK-SCIK-AISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChH-HHHH-HHHHcCCeEEEeee
Confidence 344567888899999996322 488999999 5777777766532 578875 445543 2222 23445999999884
Q ss_pred --CCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc-CC--C
Q 021539 201 --TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL-AL--A 271 (311)
Q Consensus 201 --~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl-dl--~ 271 (311)
+.++..+|+++|+++|++.+. ...++.+. .. ..|..-|+++|++ |+++|+++|+|++++. +...+ ++ .
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~-~~~~~~~~~~~ 257 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGL-QSNKYMELINK 257 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcC-cChhhhhhhhc
Confidence 444678999999999985321 12333332 22 1357899999976 6999999999999998 65332 11 1
Q ss_pred --CC-CCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 272 --LH-RPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 272 --~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
.. ++|++++|.|| ++..|.+.|+++.++
T Consensus 258 g~~~Grad~vv~s~hK-~l~~pg~Gg~I~~~d 288 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDK-NFMVPVGGAIIYSFD 288 (444)
T ss_pred cccccCCCeEEEeCcc-CCCCCCCEEEEEECC
Confidence 12 47999999999 555487777777754
No 126
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.32 E-value=4e-11 Score=119.37 Aligned_cols=160 Identities=13% Similarity=0.038 Sum_probs=113.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~ 197 (311)
++......++.++++|++.|+. . .++++|+++|+.+++.++ +++||+|++. ..++.. .+.......|+++.+
T Consensus 53 ~r~~~pt~~~Le~~lA~l~g~~--~--~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 53 TRIMNPTNDVLEQRVAALEGGV--G--ALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred cCCCCchHHHHHHHHHHHhCCC--c--eeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 3434444568899999999963 2 667888889999998887 4689998743 333311 122222335777776
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++. .+.++++++++++ +++|.+.. +.+|.+.|+++|.+ ||++|+++++|.+|+. |...-.+ .++
T Consensus 128 ~d~------~d~e~le~ai~~~-----tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~-~~~~~p~-~~g 194 (425)
T PRK06084 128 AAH------DDIAALEALIDER-----TKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVAT-PVLCRPF-EHG 194 (425)
T ss_pred ECC------CCHHHHHHHhccC-----CcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcC
Confidence 654 2678898888765 45665542 36999999999966 6999999999999997 7554333 478
Q ss_pred CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539 275 PDLVLCTLDNNTHAQPL-KITCLLVR 299 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~-GiG~L~vr 299 (311)
+|++++|++| ++|+|. .+|++++.
T Consensus 195 aDivv~S~tK-~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 195 ADIVVHSLTK-YIGGHGTSIGGIVVD 219 (425)
T ss_pred CCEEEECchh-cccccccceeEEEEe
Confidence 9999999999 665463 35777775
No 127
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.31 E-value=4e-11 Score=113.35 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
...++.|+.++++++.+ + .|++|+|++ ++..++.++ +++||.|+. ...|. ..+. .++..|.++..++.
T Consensus 61 ~~~~~l~~~la~~~~~~-~--~i~~~~G~~-~~~~~l~~~-~~~gd~v~~~~~~~~-~~~~-~~~~~g~~~~~~~~---- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTE-A--ALLFSSGYL-ANVGVISAL-VGKGDLILSDALNHA-SLID-GCRLSGARVRRYRH---- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCC-C--EEEECchHH-HHHHHHHHh-CCCCCEEEEEccccH-HHHH-HHHhcCCceEEecC----
Confidence 34678999999999963 2 477777754 444455665 578998864 33443 2222 23445888777653
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---------CCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---------LAL 272 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---------l~~ 272 (311)
++.+.|++.++.... .++.++.+... .+|.+.|+++|.+ |+++|+++++|.+|+. |..+.+ +..
T Consensus 130 --~d~~~l~~~~~~~~~-~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~ 205 (360)
T TIGR00858 130 --NDVEHLERLLEKNRG-ERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGT-GVLGEDGRGTLEHFGLKP 205 (360)
T ss_pred --CCHHHHHHHHHHccc-CCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccc-cCcCCCCCchHHhcCCCc
Confidence 367888888875310 12467766554 5899999999966 6999999999999987 754322 223
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.+.|+++.|++| +|| |.| |+++.+++.
T Consensus 206 ~~~~i~i~s~sK-~~~-~~g-G~~~~~~~~ 232 (360)
T TIGR00858 206 EPVDIQVGTLSK-ALG-SYG-AYVAGSQAL 232 (360)
T ss_pred cCCcEEEEechh-hhh-ccC-cEEEcCHHH
Confidence 467999999999 888 667 887776543
No 128
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.31 E-value=1.8e-11 Score=117.06 Aligned_cols=162 Identities=12% Similarity=0.020 Sum_probs=115.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
++.|+.+|+++|+++++ |++ |+|+++++++++.++ .++|+.|+...-+... +...++..|+++..+|.+. ++.+
T Consensus 72 ~~lr~~ia~~~~~~~~~--i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~-~~~~ 146 (361)
T PRK00950 72 PELREALSKYTGVPVEN--IIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPTFSY-YEISAKAHGAKPVYAKREE-DFSL 146 (361)
T ss_pred HHHHHHHHHHhCCCHHH--EEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCChHH-HHHHHHHcCCEEEEeecCC-CCCc
Confidence 68999999999998765 888 789999999988877 4688988644322222 2333556799999998654 5578
Q ss_pred CHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCc--ccCC-CCCCCcEEEEc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--QLAL-ALHRPDLVLCT 281 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--pldl-~~l~~Dfl~~S 281 (311)
+.+++++.++++ ++++.++. +-||.++|++++.+ ++++|+++++|.++.- -.. ...+ ...+--+++.|
T Consensus 147 ~~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 147 DVDSVLNAITEK-----TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CHHHHHHHhccC-----CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEEe
Confidence 999998888654 45655542 25999999999966 6889999999999964 211 1111 11222366679
Q ss_pred cccCcCCCCCc--eEEEEEeCCCC
Q 021539 282 LDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 282 ~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.| .|| ..| +|+++..++..
T Consensus 221 ~SK-~~g-~~GlRiG~~~~~~~~~ 242 (361)
T PRK00950 221 FSK-VFG-LAGLRIGYGFVPEWLI 242 (361)
T ss_pred ehH-hhc-CchhhcchhcCCHHHH
Confidence 999 888 447 78888765543
No 129
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.29 E-value=1.3e-10 Score=113.68 Aligned_cols=160 Identities=10% Similarity=-0.035 Sum_probs=110.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~ 197 (311)
++......++.++.+|++.|+.. .++++|++.++..+.. + +++||+|+.. ..+... .+..++.+.|+++..
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~~~----~~~~~sG~aai~~~~~-~-l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGGHA----GFAFGSGMAAITAVMM-L-FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCCCc----eEEeCCHHHHHHHHHH-H-hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 34444456689999999999842 3456666778876653 3 4689998643 334322 223344567999888
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.. +.++++++++++ +++|.+ +.+.+|.+.|+++|.+ +|++|+++++|.+++. +...-.+ .++
T Consensus 119 v~~~------d~~~l~~ai~~~-----tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~-~~~~~p~-~~g 185 (377)
T PRK07671 119 VDTS------NLEEVEEAIRPN-----TKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT-PYWQSPI-SLG 185 (377)
T ss_pred ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhC
Confidence 8642 678898888765 466665 3346899999999976 6999999999999976 5433223 368
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+|++++|++| ++|+|.+ .|++++++
T Consensus 186 ~Divv~S~sK-~l~G~~~~~~G~~v~~~ 212 (377)
T PRK07671 186 ADIVLHSATK-YLGGHSDVVAGLVVVNS 212 (377)
T ss_pred CeEEEecCcc-cccCCccceeEEEEeCc
Confidence 8999999999 6665864 34555544
No 130
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.29 E-value=6.9e-11 Score=116.48 Aligned_cols=157 Identities=11% Similarity=-0.016 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~ 203 (311)
...+.++++|++.|.+ + +++++|+++|+..++.++ +++||+|++ ...|... .+...++..|+++.+++..
T Consensus 65 ~~~~Le~~iA~~~g~~--~--~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 137 (400)
T PRK06234 65 TSTEVENKLALLEGGE--A--AVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-- 137 (400)
T ss_pred cHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence 3458899999999973 3 788889999998877766 578999864 3344422 1233345679999888753
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCCCCCcEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALALHRPDLV 278 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~~Dfl 278 (311)
+.+++++.++++ +++|.+.. +-+|.+.|+++|.+ +|++ |+++++|.+++. +.....+ .+++|++
T Consensus 138 ----d~e~l~~~i~~~-----tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~-~~~~~~l-~~g~Div 206 (400)
T PRK06234 138 ----NLEEVRNALKAN-----TKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCT-PYIQRPL-QLGADVV 206 (400)
T ss_pred ----CHHHHHHHhccC-----CeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCc-hhcCCch-hhCCcEE
Confidence 578888888765 46666543 35999999999966 6875 999999999988 7544333 3589999
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
++|++| ++|+|.. .|+++.+++.
T Consensus 207 v~S~sK-~l~g~g~~~gG~v~~~~~~ 231 (400)
T PRK06234 207 VHSATK-YLNGHGDVIAGFVVGKEEF 231 (400)
T ss_pred Eeeccc-cccCCCCceeEEEEecHHH
Confidence 999999 6663522 4888777654
No 131
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.29 E-value=6.8e-11 Score=110.98 Aligned_cols=168 Identities=14% Similarity=0.146 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC-CCCc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET-WLDL 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~-~~~g 205 (311)
+.+--+.+|+|||++ + +=+|.||.||=-.+-.++. ++||.|+... .|.+..+ .|++.|.+|..+|.. .++-
T Consensus 63 I~~F~~dlaeFlg~D--~--~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYttyv--AAEragl~v~eVp~tg~Pey 135 (382)
T COG1103 63 IKDFLEDLAEFLGMD--E--VRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTYV--AAERAGLNVAEVPNTGYPEY 135 (382)
T ss_pred HHHHHHHHHHHhCCc--e--eeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHHH--HHHhcCCeEEecCCCCCCce
Confidence 445566699999995 4 7899999999877777774 6789886443 3444444 256679999999953 3556
Q ss_pred ccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 206 RIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
.|+++...+.|.+-.++ .+..|..++++ .-|.+.|.+.|+. ||++|+++++.+|=.+ |..|++..+.++||++.
T Consensus 136 ~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~-Grmpvs~ke~g~DFiVg 214 (382)
T COG1103 136 KITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTV-GRMPVSGKEIGADFIVG 214 (382)
T ss_pred EecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceee-ccccccccccCCCEEEe
Confidence 78888777666531111 23567777887 6899999999977 6999999999999999 99999999999999999
Q ss_pred ccccCcCCCCCceEEEEEeCCCCc
Q 021539 281 TLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 281 S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|+||+|-. -.=+|+|-++.++.+
T Consensus 215 SGHKsmAA-s~PiGvl~~~eE~ae 237 (382)
T COG1103 215 SGHKSMAA-SAPIGVLAMSEEWAE 237 (382)
T ss_pred cCccchhc-cCCeeEEeehhHHHH
Confidence 99997653 223999999877654
No 132
>PRK07908 hypothetical protein; Provisional
Probab=99.28 E-value=7.8e-11 Score=112.77 Aligned_cols=155 Identities=14% Similarity=0.086 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC--hHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE--SDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~--~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
..+.|+.||+++|+++++ |++|+|+++++++++. + .+|+.++. ++ ...+ ..++..|.++..+|.+. +.
T Consensus 60 ~~~lr~aia~~~~~~~~~--I~it~Ga~~al~~~~~-l--~~~~viv~---~P~y~~~~-~~~~~~G~~i~~v~~~~-~~ 129 (349)
T PRK07908 60 ERRARAAVAARHGRTPDE--VLLLAGAAEGFALLAR-L--RPRRAAVV---HPSFTEPE-AALRAAGIPVHRVVLDP-PF 129 (349)
T ss_pred hHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHh-c--CCCeEEEe---CCCChHHH-HHHHHcCCEEEeeccCc-cc
Confidence 357999999999998765 9999999999999988 4 45554442 23 2222 34566799999999874 34
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHHHHHCCcEEEeccccc--CccCcccCCCCCC-CcEEEE
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISEAHRNAWHVLLDATGL--VFGEDQLALALHR-PDLVLC 280 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~a~~~g~~vlvDAaQs--v~G~~pldl~~l~-~Dfl~~ 280 (311)
.++.+.+ +++ ++++.++. +-||+++|.++|.++.+++.++++|.+++ + ...+.++.... .+++++
T Consensus 130 ~~d~~~l----~~~-----~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~-~~~~~~l~~~~~~~~i~i 199 (349)
T PRK07908 130 RLDPAAV----PDD-----ADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAV-PGEPESLAGDDLPGVLVL 199 (349)
T ss_pred CcChhHh----ccC-----CCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhc-cCCccccccccCCCEEEE
Confidence 5666643 332 35665542 25999999999976534588899999985 3 22344443222 255555
Q ss_pred -ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 281 -TLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 281 -S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
|++| .|| +.| +|+++.++++.+
T Consensus 200 ~S~SK-~~~-l~GlRiG~~~~~~~~~~ 224 (349)
T PRK07908 200 RSLTK-TWS-LAGLRVGYALGAPDVLA 224 (349)
T ss_pred eeccc-ccC-CccceeeeeecCHHHHH
Confidence 9999 888 446 599998776544
No 133
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.27 E-value=9.9e-11 Score=114.04 Aligned_cols=167 Identities=9% Similarity=0.026 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 126 IPEIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
...+..++.+++++|++.+ +++|++|+|+++++..++.++ +.+||.|++. -.+... ...++..|++++.+|.+.
T Consensus 69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~- 144 (389)
T PRK05957 69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI-TDPGDEIILNTPYYFNH--EMAITMAGCQPILVPTDD- 144 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEeecCC-
Confidence 4456788888888897533 346999999999999888877 5789988643 332211 122345699999999874
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc--c---Ccc-cCC-
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--G---EDQ-LAL- 270 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G---~~p-ldl- 270 (311)
+..++.+.+++.++++ +++|.+++. -||.++| +++|.+ |+++|+++++|.+..-. + +.+ ..+
T Consensus 145 ~~~~d~~~l~~~i~~~-----~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 219 (389)
T PRK05957 145 NYQLQPEAIEQAITPK-----TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIP 219 (389)
T ss_pred CCCcCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCC
Confidence 5678999999988754 456666533 5999999 666644 68999999999985410 1 111 111
Q ss_pred CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 271 ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 271 ~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
....--+++.|+=| .|| +.| +|++++.+++.
T Consensus 220 ~~~~~~i~~~S~SK-~~g-~~GlRiG~~~~~~~~~ 252 (389)
T PRK05957 220 GSGNHTISLYSLSK-AYG-FASWRIGYMVIPIHLL 252 (389)
T ss_pred CccCcEEEEecchh-hcc-CccceeEEEecCHHHH
Confidence 11122366777779 888 558 99999876554
No 134
>PRK08960 hypothetical protein; Provisional
Probab=99.26 E-value=1.1e-10 Score=113.36 Aligned_cols=163 Identities=13% Similarity=0.109 Sum_probs=112.9
Q ss_pred HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|++++ +++++ |++|+|+++|+++++..+ +.+||.|+. ..++... ...++..|.+++.+|++
T Consensus 72 ~~lr~~ia~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~~--~~~~~~~g~~~~~v~~~ 146 (387)
T PRK08960 72 PALREAIAGFYAQRYGVDVDPER--ILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPCN--RHFLRLVEGAAQLVPVG 146 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCChhh--EEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch--HHHHHhcCCeEEEEecC
Confidence 478999999874 56554 999999999999999888 578999863 4444422 12334458899999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc--cCcccCCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF--GEDQLALAL 272 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~--G~~pldl~~ 272 (311)
.+ +..++.++++++++++ ++++.+ +++-||.++|.+++. + |+++|+++++|.+..-. +.....+..
T Consensus 147 ~~~~~~~d~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~ 221 (387)
T PRK08960 147 PDSRYQLTPALVERHWNAD-----TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLE 221 (387)
T ss_pred cccCCCCCHHHHHHHhCcc-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhh
Confidence 53 2357899999888764 345444 334699999987653 3 58899999999974310 111112222
Q ss_pred CCC-cEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 273 HRP-DLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 273 l~~-Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
... -+++.|+.| .|| ..| +|+++..++..
T Consensus 222 ~~~~vi~~~S~SK-~~g-~~GlRiG~~~~~~~~~ 253 (387)
T PRK08960 222 VDDDAFVLNSFSK-YFG-MTGWRLGWLVAPPAAV 253 (387)
T ss_pred ccCCEEEEeeccc-ccC-CcccEEEEEEcCHHHH
Confidence 222 368899999 998 558 99999876543
No 135
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.26 E-value=6.6e-11 Score=115.10 Aligned_cols=163 Identities=15% Similarity=0.106 Sum_probs=114.1
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|+++ | ++++ +|++|+|+|+|+++++.++ ..+|+.|+. ...+. . +...++..|.++..+|.+
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~p~y~-~-~~~~~~~~g~~~~~v~~~ 147 (391)
T PRK08361 73 PELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPDPAFV-C-YVEDAKIAEAKPIRIPLR 147 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-cHHHHHHcCCEEEEEecC
Confidence 36788888876 3 5555 4999999999999999887 468898863 33333 1 223345569999999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
.. +..++.+++++.++++ ++++.++ ++-||.++| +++|.+ |+++++++++|.+..-. +.....+.
T Consensus 148 ~~~~~~~d~~~l~~~i~~~-----~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (391)
T PRK08361 148 EENEFQPDPDELLELITKR-----TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI 222 (391)
T ss_pred CccCCCCCHHHHHHhcccc-----cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence 43 2358999999888764 4566554 336999999 566644 68899999999885420 11111221
Q ss_pred C--CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 272 L--HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 272 ~--l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
. ...++++.|++| .|| ..| +|+++..+++.
T Consensus 223 ~~~~~~~i~~~s~SK-~~~-~~GlRiG~~~~~~~~~ 256 (391)
T PRK08361 223 KYAPDNTILANSFSK-TFA-MTGWRLGFVIAPEQVI 256 (391)
T ss_pred hcCCCCEEEEecCch-hcC-CcHhhhhhhccCHHHH
Confidence 1 246789999999 998 448 89999876554
No 136
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.24 E-value=2e-10 Score=110.52 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc-c
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL-R 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g-~ 206 (311)
..+.|+.||+++++++++ |++|+|+++++++++..+ .+|+.++..-.. . .....++..|.++..+|.+..++ .
T Consensus 57 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~l--~~g~viv~~P~y-~-~~~~~~~~~g~~~~~v~~~~~~~~~ 130 (356)
T PRK08056 57 YRHLHQALARHHQVPASW--ILAGNGETESIFAVVSGL--KPRRAMIVTPGF-A-EYRRALQQVGCEIRRYSLREADGWQ 130 (356)
T ss_pred HHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHh--CCCCEEEeCCCc-H-HHHHHHHHcCCeEEEEecccccCCC
Confidence 468999999999998765 999999999999998876 467655432221 1 13344566799999999764223 3
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEeccccc--Cc-cCcccC-CCCCCCc
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGL--VF-GEDQLA-LALHRPD 276 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQs--v~-G~~pld-l~~l~~D 276 (311)
++ +++.+.+.++ +++|.++ ++-||..+| +++|.+ |+++++++++|.+-. .. +...++ +...+.+
T Consensus 131 ~~-~~~~~~~~~~-----~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 204 (356)
T PRK08056 131 LT-DAILEALTPD-----LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHL 204 (356)
T ss_pred cc-HHHHHhccCC-----CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCE
Confidence 33 3444555433 4565554 335999999 555644 688999999999821 10 111111 3345578
Q ss_pred EEEEccccCcCCCC-CceEEEEEe
Q 021539 277 LVLCTLDNNTHAQP-LKITCLLVR 299 (311)
Q Consensus 277 fl~~S~HK~l~G~P-~GiG~L~vr 299 (311)
+++.|++| +||.| ..+|+++..
T Consensus 205 i~~~S~SK-~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 205 WVLRSLTK-FYAIPGLRLGYLVNS 227 (356)
T ss_pred EEEEechh-hccCcchhheeeecC
Confidence 99999999 88833 138888774
No 137
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.24 E-value=1.6e-10 Score=111.22 Aligned_cols=161 Identities=16% Similarity=0.093 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
...++.++.+++++|++ + .|++|+| ++++..++.++ +++||.|+. ...|.+. . ..++..|.++..++.
T Consensus 87 ~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~~~~~~~~-~-~~~~~~~~~~~~~~~---- 155 (397)
T PRK06939 87 DLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISDALNHASI-I-DGVRLCKAKRYRYAN---- 155 (397)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEEhhhhHHH-H-HHHHhcCCceEEeCC----
Confidence 44568899999999974 3 4888888 77877777776 578999864 3444422 1 223334666665543
Q ss_pred cccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCC
Q 021539 205 LRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALA 271 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~ 271 (311)
.+.+++++.+++... ..++++|++.++ .+|.+.|+++|.+ |+++|+++++|.+|+. |.... ++.
T Consensus 156 --~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~-g~~~~~~~~~~~~~~~~ 232 (397)
T PRK06939 156 --NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAV-GFVGENGRGTVEHFGVM 232 (397)
T ss_pred --CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCCHHHHcCCC
Confidence 356777777764111 112567776654 4899999999966 7999999999999976 64321 221
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
.++|++++|++| +++++. .|+++.+++..
T Consensus 233 -~~~~i~~~S~sK-~~~g~r-~G~v~~~~~~~ 261 (397)
T PRK06939 233 -DRVDIITGTLGK-ALGGAS-GGYTAGRKEVI 261 (397)
T ss_pred -CCCcEEEEECHH-HhCccC-ceEEEeCHHHH
Confidence 257999999999 664364 58888876543
No 138
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=2.5e-10 Score=109.60 Aligned_cols=162 Identities=12% Similarity=0.092 Sum_probs=115.6
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
++.|+.+|+++++++++ |++|+|+++++++++..+ +.+||.|+.. ..+. .....++..|.++..++.+. ++.+
T Consensus 62 ~~lr~~ia~~~~~~~~~--i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~ 135 (351)
T PRK14807 62 EKLREELARYCSVVPTN--IFVGNGSDEIIHLIMLAF-INKGDVVIYPHPSFA--MYSVYSKIAGAVEIPVKLKE-DYTY 135 (351)
T ss_pred HHHHHHHHHHhCCCccc--EEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChH--HHHHHHHHcCCeEEEeecCC-CCCC
Confidence 58999999999998765 999999999999999887 5789988632 2211 23344566799999999874 5678
Q ss_pred CHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccC-CCCCCCcEEEEcc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLA-LALHRPDLVLCTL 282 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pld-l~~l~~Dfl~~S~ 282 (311)
+.+++++.+++. +++++.++ ++-||..+|.+++.+ +++++..+++|.+..-. +....+ +....--+++.|+
T Consensus 136 d~~~l~~~~~~~----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~ 211 (351)
T PRK14807 136 DVGSFIKVIEKY----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTL 211 (351)
T ss_pred CHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecc
Confidence 999999888642 14555544 225999999999976 57767789999997420 322222 1222335888999
Q ss_pred ccCcCCCCCc--eEEEEEeCCC
Q 021539 283 DNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 283 HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.| .|| ..| +|.++..+++
T Consensus 212 SK-~~~-~~GlRiG~~v~~~~~ 231 (351)
T PRK14807 212 SK-AFG-LAGLRVGYAVANENI 231 (351)
T ss_pred hH-hcc-cchhceeeeecCHHH
Confidence 99 888 346 7888776544
No 139
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.23 E-value=1.8e-10 Score=110.74 Aligned_cols=161 Identities=10% Similarity=0.036 Sum_probs=110.6
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.+|+++ | ++++ +|++|+|+++|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+.
T Consensus 65 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~v~~~~ 139 (382)
T PRK06108 65 ELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVTPLWP-N-LVAAPKILGARVVCVPLDF 139 (382)
T ss_pred HHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCcc-c-hHHHHHHCCCEEEEeeCCC
Confidence 5667777654 6 5554 5999999999999998877 468898763 33333 1 2233456699999999864
Q ss_pred C--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccCcc-------
Q 021539 203 L--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQ------- 267 (311)
Q Consensus 203 ~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~p------- 267 (311)
. +..++.++|++.++++ ++++.++ ++-||.++|.++ |.+ |+++|+++++|.+++. ....
T Consensus 140 ~~~~~~~d~~~l~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~-~~~~~~~~~~~ 213 (382)
T PRK06108 140 GGGGWTLDLDRLLAAITPR-----TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYER-LYYAPGGRAPS 213 (382)
T ss_pred CCCCccCCHHHHHHhcCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhh-hccCCCCCCCC
Confidence 2 2357899998888654 4555554 235999887654 443 5889999999998764 2211
Q ss_pred -cCCCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 268 -LALAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 268 -ldl~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+++.. .+..+++.|++| .|| ..| +|++++++++.
T Consensus 214 ~~~~~~~~~~~i~~~S~SK-~~g-~~G~RiG~~~~~~~~~ 251 (382)
T PRK06108 214 FLDIAEPDDRIIFVNSFSK-NWA-MTGWRLGWLVAPPALG 251 (382)
T ss_pred HhhcCCCcCCEEEEeechh-hcc-CcccceeeeeCCHHHH
Confidence 22322 234588999999 887 336 79999976554
No 140
>PLN02242 methionine gamma-lyase
Probab=99.23 E-value=1.6e-10 Score=114.81 Aligned_cols=164 Identities=9% Similarity=-0.024 Sum_probs=115.2
Q ss_pred chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHH-HHHHhCCcEE
Q 021539 120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIK-GFAAQKESKV 195 (311)
Q Consensus 120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~-~la~~~G~~V 195 (311)
.++......++.++.+|+++|+. . +++|+|+++|+.+++.++ +++||+|+.... +.. ..+. .+.+..|+++
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~--~--~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~ 144 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTE--A--AYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGGTHALLAHFLPRKCNITT 144 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence 35555556778999999999984 2 678999999999998887 578999874332 111 1121 1223358777
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL 272 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~ 272 (311)
..++.. +.++++++++++ ++++|.+... -+|.+.|+++|.+ ||++|+++++|.+++. .. ++...
T Consensus 145 ~~~d~~------d~e~l~~~i~~~----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~--~~~~~ 211 (418)
T PLN02242 145 TFVDIT------DLEAVKKAVVPG----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MV--LSPAR 211 (418)
T ss_pred EEcCCC------CHHHHHHhcCcC----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cC--CCHHH
Confidence 666542 678888888752 1466666433 5999999999976 6999999999999976 43 34445
Q ss_pred CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+++|+++.|++| .+|++.. .|+++.++++
T Consensus 212 ~g~divv~S~SK-~l~g~g~~~gG~iv~~~~l 242 (418)
T PLN02242 212 LGADVVVHSISK-FISGGADIIAGAVCGPAEL 242 (418)
T ss_pred cCCcEEEEeCcc-ccCCCCCceEEEEEcCHHH
Confidence 689999999999 6663532 4666655443
No 141
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.23 E-value=3e-10 Score=108.76 Aligned_cols=157 Identities=16% Similarity=0.120 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
...++.|+.++++++.+ + .++++++++++..++..+ +++||.|+. ...|.. ... .++..|.++..+|..
T Consensus 84 ~~~~~l~~~la~~~~~~--~--~i~~~~g~~~~~~~l~~~-~~~gd~V~~~~~~~~~-~~~-~~~~~g~~~~~~~~~--- 153 (385)
T PRK05958 84 PAHEALEEELAEWFGAE--R--ALLFSSGYAANLAVLTAL-AGKGDLIVSDKLNHAS-LID-GARLSRARVRRYPHN--- 153 (385)
T ss_pred HHHHHHHHHHHHHhCCC--c--EEEECcHHHHHHHHHHHh-CCCCCEEEEeCccCHH-HHH-HHHhcCCceEEeCCC---
Confidence 44678999999999952 2 444555666665555555 578999864 344432 222 233458887777642
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALAL 272 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~ 272 (311)
+.+++++.++... ..+.++.+... .+|.+.|+++|.+ |+++|+++++|.+|+. |... .++..
T Consensus 154 ---d~~~l~~~i~~~~--~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~-g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 154 ---DVDALEALLAKWR--AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT-GVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred ---CHHHHHHHHHhcc--CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cccCCCCCchHHhhCCCC
Confidence 5678888886521 12466666544 5899999999966 7999999999999987 6432 12333
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
...++++.|+|| +|| +.| |+++.+++
T Consensus 228 ~~~~i~~~s~sK-~~~-~~G-g~~~~~~~ 253 (385)
T PRK05958 228 EPDVILVGTLGK-ALG-SSG-AAVLGSET 253 (385)
T ss_pred CCceEEEEechh-hcc-cCC-cEEEcCHH
Confidence 334588999999 888 667 77766543
No 142
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.23 E-value=2e-10 Score=110.64 Aligned_cols=159 Identities=15% Similarity=0.081 Sum_probs=108.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
....++.++.+++++|.+ + .|++|+| ++++..++.++ +.+||.|+... .|.. .+.. +...|+++..++
T Consensus 77 ~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~~~~~~-~~~~-~~~~g~~~~~~~---- 145 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQGVLSAL-LRKGDIVLSDELNHAS-IIDG-LRLTKATKKIYK---- 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHh-CCCCCEEEEEccccHH-HHHH-HHhcCCceEEeC----
Confidence 345678999999999963 2 4888877 56666666665 57899886433 3432 2221 223466665543
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCC
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALA 271 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~ 271 (311)
.++.+++++.+++... .++++|++..+ .+|.+.|+++|.+ |+++|+++++|.+|+. |..+ +++.
T Consensus 146 --~~d~~~l~~~l~~~~~-~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 146 --HADMDDLDRVLRENPS-YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGS-GVMGEAGRGTVHHFGLE 221 (385)
T ss_pred --CCCHHHHHHHHHhhcc-CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCccHhhcCCC
Confidence 2567778877764311 13678877654 5899999999966 6999999999999987 6432 3444
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.+.||++.|++| .+| ..| |+++.+++.
T Consensus 222 -~~~~i~~~s~sK-~~~-~~g-G~~~~~~~~ 248 (385)
T TIGR01825 222 -DKVDIQVGTLSK-AIG-VVG-GYAAGHKEL 248 (385)
T ss_pred -cCCcEEEEeccH-Hhh-cCC-CEEecCHHH
Confidence 578999999999 778 445 777766544
No 143
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.23 E-value=3.3e-10 Score=110.57 Aligned_cols=163 Identities=11% Similarity=0.102 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..+.|+.+|++++ +++++ |++|+|+|+++++++.++ ..+|+.|+. ...+. . +...++..|++++.+|.
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p~~~-~-~~~~~~~~g~~v~~v~~ 149 (394)
T PRK06836 75 YPEVREAIAESLNRRFGTPLTADH--IVMTCGAAGALNVALKAI-LNPGDEVIVFAPYFV-E-YRFYVDNHGGKLVVVPT 149 (394)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcCc--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-HHHHHHHcCCEEEEEec
Confidence 4478889999885 45554 999999999999999887 478898763 22222 1 33345567999999998
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH----HHH------CCcEEEecccccCc---cC
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE----AHR------NAWHVLLDATGLVF---GE 265 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~----a~~------~g~~vlvDAaQsv~---G~ 265 (311)
+..++.++.++++++++++ +++|.+++. -||+++|.+++.+ |++ +++++++|.+..-. |.
T Consensus 150 ~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~ 224 (394)
T PRK06836 150 DTDTFQPDLDALEAAITPK-----TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA 224 (394)
T ss_pred CCccCcCCHHHHHhhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC
Confidence 7533578999999998764 466666533 5999999876632 466 79999999986521 11
Q ss_pred cccC-CCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 266 DQLA-LALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 266 ~pld-l~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.... ++..+-.+++.|+.| .||.| | +|++++.+..
T Consensus 225 ~~~~~~~~~~~~i~~~S~SK-~~~~p-GlRiG~~~~~~~~ 262 (394)
T PRK06836 225 EVPYIFKYYDNSIVVYSFSK-SLSLP-GERIGYIAVNPEM 262 (394)
T ss_pred CCCChHHccCcEEEEecchh-hccCc-ceeeEEEecCHHH
Confidence 1111 222334688899999 88845 5 8999987654
No 144
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.22 E-value=3.7e-10 Score=108.26 Aligned_cols=163 Identities=11% Similarity=-0.038 Sum_probs=108.4
Q ss_pred HHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCC---CEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539 130 QARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKG---NYYLTI-ISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 130 ~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~G---d~Ils~-~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
+.|+.|++++ |.+-+.. +|++|+|+++|++.+...+. .+| |.|+.. ..+. . ....++..|++++.+|.
T Consensus 40 ~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~-~-~~~~~~~~g~~~~~v~~ 116 (350)
T TIGR03537 40 ALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYP-V-YERGALFAGGEPTAVKL 116 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCc-c-hHHHHHhcCCEEEEccc
Confidence 5777777775 6432222 59999999999999988773 445 577633 2322 1 22334557999999988
Q ss_pred CCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccC--ccCcccCCC
Q 021539 201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLV--FGEDQLALA 271 (311)
Q Consensus 201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv--~G~~pldl~ 271 (311)
+.. +..++.++++++++++ ++++.++ ++-||..+| +++|.+ |+++|+++++|.++.- .+..+.++.
T Consensus 117 ~~~~~~~~d~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 191 (350)
T TIGR03537 117 KKEDGFLLRLEKVEKSILEE-----TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL 191 (350)
T ss_pred CcccCCccCHHHHHHhhhhc-----cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh
Confidence 632 3347999999888764 4565554 336999999 555644 6899999999999852 043333333
Q ss_pred CCCC--cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 272 LHRP--DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 272 ~l~~--Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
..+. .+++.|+.| .+|.| | +|+++..+++
T Consensus 192 ~~~~~~~i~~~s~SK-~~g~~-GlRiG~~~~~~~~ 224 (350)
T TIGR03537 192 EVGIENVLAFHSLSK-RSGMT-GYRSGFVAGDEKL 224 (350)
T ss_pred hcCcCCEEEEeeccc-ccCCc-cccceeeecCHHH
Confidence 2233 377779999 88844 7 8888765543
No 145
>PLN02483 serine palmitoyltransferase
Probab=99.21 E-value=2.7e-10 Score=115.22 Aligned_cols=162 Identities=14% Similarity=0.139 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
....++.|+.+|+++|.+ + .|+|++|....+ .++.++ +.+||.|++. ..|.+ +...++..|++++.++.+
T Consensus 145 ~~~~~ele~~lA~~~g~~-~--ai~~~~G~~an~-~~i~al-~~~Gd~Vi~d~~~h~s--~~~~~~~~Ga~v~~~~~~-- 215 (489)
T PLN02483 145 TKLHRELEELVARFVGKP-A--AIVFGMGYATNS-TIIPAL-IGKGGLIISDSLNHNS--IVNGARGSGATIRVFQHN-- 215 (489)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECCHHHHHH-HHHHHh-CCCCCEEEEcchhhHH--HHHHHHHcCCeEEEEeCC--
Confidence 456689999999999963 3 488888754433 445555 5789998754 34443 223456679999998864
Q ss_pred CcccCHHHHHhhhhc-------cCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----
Q 021539 204 DLRIKGSQLSQNFRR-------KCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ----- 267 (311)
Q Consensus 204 ~g~id~~~L~~~l~~-------~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----- 267 (311)
+.++|++.+++ ++... .+.+|.+..+ .+|.+.++++|.+ |+++|+++++|.+|++ |...
T Consensus 216 ----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~-g~~G~~G~g 290 (489)
T PLN02483 216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSI-GAVGKTGRG 290 (489)
T ss_pred ----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCcc-CccCCCCCc
Confidence 23455555442 11000 1235555555 4899999999966 6999999999999987 6421
Q ss_pred ----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 268 ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 268 ----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
+++...++|+++.|++| .|| +.| |+++.+++++
T Consensus 291 ~~~~~~v~~~~~dI~~~SfSK-s~g-~~G-G~i~~~~~li 327 (489)
T PLN02483 291 VCELLGVDPADVDIMMGTFTK-SFG-SCG-GYIAGSKELI 327 (489)
T ss_pred hHHhcCCCcccCcEEEEecch-hcc-cCc-eEEEcCHHHH
Confidence 23333468999999999 888 667 8887766544
No 146
>PRK09105 putative aminotransferase; Provisional
Probab=99.21 E-value=2.2e-10 Score=111.33 Aligned_cols=163 Identities=17% Similarity=0.066 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..+.|+.||+++|+++++ |++|+|+++++++++..+ ..+||.|+.. ..+. . ....++..|.+++.+|.+. +..
T Consensus 80 ~~~Lr~aia~~~~v~~e~--I~it~Gs~~ai~~~~~~l-~~~gd~Vli~~P~y~-~-~~~~~~~~g~~~~~v~~~~-~~~ 153 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADH--VMAYAGSSEPLNYAVLAF-TSPTAGLVTADPTYE-A-GWRAADAQGAPVAKVPLRA-DGA 153 (370)
T ss_pred HHHHHHHHHHHhCcChhh--EEEcCChHHHHHHHHHHH-cCCCCEEEEeCCChH-H-HHHHHHHcCCeEEEecCCC-CCC
Confidence 558999999999998765 999999999999999887 4678887633 3322 2 2334566799999999864 566
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH---HHCCcEEEecccccCccCcc--cCCCCCCCcEEE
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA---HRNAWHVLLDATGLVFGEDQ--LALALHRPDLVL 279 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a---~~~g~~vlvDAaQsv~G~~p--ldl~~l~~Dfl~ 279 (311)
++.+++++. .++ ++++.++ ++-||.++|.+++.++ +++++++++|.+..-.+..+ +++.....++++
T Consensus 154 ~d~~~l~~~-~~~-----~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~ 227 (370)
T PRK09105 154 HDVKAMLAA-DPN-----AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIV 227 (370)
T ss_pred CCHHHHHhc-CCC-----CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEE
Confidence 888888765 222 3455443 3369999999998653 23589999999874212222 333333566666
Q ss_pred E-ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 280 C-TLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 280 ~-S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+ |+-| .|| ..| +|+++..+++++
T Consensus 228 ~~SfSK-~~g-~~GlRiG~~v~~~~~i~ 253 (370)
T PRK09105 228 LRTFSK-LYG-MAGMRLGLAAARPDLLA 253 (370)
T ss_pred EecccH-hhc-CCccceeeeecCHHHHH
Confidence 5 6668 998 568 999998765543
No 147
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.20 E-value=5.5e-10 Score=110.50 Aligned_cols=160 Identities=11% Similarity=-0.003 Sum_probs=111.4
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~v 198 (311)
+......+..++.++.+-+.. . .++++++++|++.++.++ +++||+|+.. ..+... .+..++++.|++|.++
T Consensus 60 R~gnPt~~~Le~~la~le~~~--~--~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v 134 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGSA--G--TILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY 134 (395)
T ss_pred CCCChHHHHHHHHHHHHhCCC--C--EEEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence 444444567788888777653 2 455666899999998887 6899998743 333322 2335567789999988
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
+.+ +.+.++++++++ +++|.+... .+|.+.||++|.+ ||++|++++||.+++. + ...+.-++++
T Consensus 135 d~~------~~e~l~~al~~~-----TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~-p-~~~~pl~~Ga 201 (395)
T PRK05967 135 DPE------IGAGIAKLMRPN-----TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWAT-P-LYFRPLDFGV 201 (395)
T ss_pred CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccC-c-eecChhHcCC
Confidence 643 236788888765 578877643 5899999999976 7999999999999987 5 2223334689
Q ss_pred cEEEEccccCcCCCC-Cc-eEEEEEeC
Q 021539 276 DLVLCTLDNNTHAQP-LK-ITCLLVRR 300 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P-~G-iG~L~vr~ 300 (311)
|+++-|..| ++++- -- .|++..++
T Consensus 202 Divv~S~tK-y~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 202 DISIHAATK-YPSGHSDILLGTVSANE 227 (395)
T ss_pred CEEEEeccc-ccCCCCCeeEEEEEcCH
Confidence 999999999 44411 11 56554443
No 148
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.18 E-value=4e-10 Score=109.15 Aligned_cols=162 Identities=13% Similarity=0.059 Sum_probs=111.8
Q ss_pred HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|+++ +++++ +|++|+|+|+|+.+++.++ ..+|+.|+. ...|. .....++..|+++..+|.+
T Consensus 71 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~y~--~~~~~~~~~g~~~~~~~~~ 145 (393)
T PRK05764 71 PELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIPAPYWV--SYPEMVKLAGGVPVFVPTG 145 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEecCCCCc--chHHHHHHcCCEEEEEecC
Confidence 47888888887 35544 4999999999999998887 568888763 33333 1333455669999999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCc-----
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GED----- 266 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~----- 266 (311)
.. +..++.+.+++.++++ +++|.++. +-||.++|.+ +|.+ |+++|+++++|.+..-. +..
T Consensus 146 ~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 220 (393)
T PRK05764 146 EENGFKLTVEQLEAAITPK-----TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIA 220 (393)
T ss_pred cccCCcCCHHHHHHhhCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHH
Confidence 42 3467889999888654 45655543 2599998854 5544 68999999999876531 111
Q ss_pred ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 267 QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 267 pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.++....+.++++.|+-| .+| +.| +|+++.+++.
T Consensus 221 ~~~~~~~~~~i~~~s~SK-~~~-~~G~RiG~i~~~~~~ 256 (393)
T PRK05764 221 SLSPELRDRTITVNGFSK-AYA-MTGWRLGYAAGPKEL 256 (393)
T ss_pred HcCCCCcCCEEEEecCcc-ccc-CccceeEEEecCHHH
Confidence 111122346789999999 888 447 7988876654
No 149
>PRK08912 hypothetical protein; Provisional
Probab=99.18 E-value=5.7e-10 Score=108.27 Aligned_cols=163 Identities=10% Similarity=0.036 Sum_probs=112.2
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.+++++ | ++++ .+|++|+|+|+|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+.
T Consensus 67 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~~~~~~ 142 (387)
T PRK08912 67 ELRQAVAAHYARFQGLDLDPE-TEVMVTSGATEALAAALLAL-VEPGDEVVLFQPLYD-A-YLPLIRRAGGVPRLVRLEP 142 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCc-ccEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEEecCc
Confidence 5677777665 4 4444 15999999999999888877 467898863 33322 2 3344566799999999864
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc--cC---ccc-CC
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF--GE---DQL-AL 270 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~--G~---~pl-dl 270 (311)
.+..++.+.|++.+.++ ++++.++ ++-||.++|.++ |.+ |+++++++++|.+..-. +. .++ .+
T Consensus 143 ~~~~~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 217 (387)
T PRK08912 143 PHWRLPRAALAAAFSPR-----TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTL 217 (387)
T ss_pred ccCcCCHHHHHHHhCcc-----ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhC
Confidence 35678999999888754 3455544 236999999655 433 68899999999987420 11 111 12
Q ss_pred CC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 271 AL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 271 ~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.. .+.++++.|+.| .|| ..| +|+++..+++.
T Consensus 218 ~~~~~~~i~~~S~SK-~~g-~~GlRiG~~~~~~~~~ 251 (387)
T PRK08912 218 PGMRERTVKIGSAGK-IFS-LTGWKVGFVCAAPPLL 251 (387)
T ss_pred CCccCceEEEeechh-hcc-CcCceeEEEecCHHHH
Confidence 11 245799999999 998 558 89999876543
No 150
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.17 E-value=8.6e-10 Score=108.67 Aligned_cols=150 Identities=15% Similarity=0.021 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH---HHHHHHHhCCcEEEEEeCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD---YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~---~~~~la~~~G~~V~~vp~~~~ 203 (311)
..++.-+++|++.|+. . .+.++++|.|+++++.++ +++||+|++...+... .+.....+.|+++.+++++..
T Consensus 65 ~~~~lE~~la~leg~~--~--av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 65 TVQAFEEKYAVLENAE--H--ALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred hHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 3445566699999984 2 566777779999999887 6899998865544322 223445667999999987631
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
..++ ++++ ++++|.+.+. .++.+.|+++|.+ ||+++ ++||++|+. +...-.+ .+++|++++
T Consensus 140 -~~~~-------l~~~----~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s-~~~~~pl-~~gaDivv~ 203 (384)
T PRK06434 140 -NSLD-------FDPS----NYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS-PYNQNPL-DLGADVVIH 203 (384)
T ss_pred -hhee-------ecCC----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC-cccCCch-hcCCCEEEe
Confidence 1221 2221 2577766544 4889999999976 68888 567999987 6552233 368999999
Q ss_pred ccccCcCCCCCc-eEEEEE
Q 021539 281 TLDNNTHAQPLK-ITCLLV 298 (311)
Q Consensus 281 S~HK~l~G~P~G-iG~L~v 298 (311)
|+|| ++++|.+ +|.+++
T Consensus 204 S~tK-~i~G~~d~~gG~vv 221 (384)
T PRK06434 204 SATK-YISGHSDVVMGVAG 221 (384)
T ss_pred eccc-ccCCCCCceEEEEe
Confidence 9999 5554764 344443
No 151
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.16 E-value=2.4e-10 Score=113.14 Aligned_cols=169 Identities=14% Similarity=0.041 Sum_probs=106.6
Q ss_pred hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEEEcc----CcChHH-HHHH----HH
Q 021539 121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYLTII----SEESDY-IKGF----AA 189 (311)
Q Consensus 121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Ils~~----eh~~~~-~~~l----a~ 189 (311)
|......+ +-+++++.++||++++++.+-+= -+++.|+..+..++ .++||.|++.. +|-+.. .... +.
T Consensus 60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL-l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~ 138 (399)
T PF00464_consen 60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL-LKPGDTIMGLSLPHGGHLSHGSSVNFKKISAS 138 (399)
T ss_dssp STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH-T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHH
T ss_pred CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH-HhhcCcEEecChhhcccccccccccccccccc
Confidence 44444444 46999999999998766544444 48888988888888 48999997322 232111 1000 01
Q ss_pred hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc--
Q 021539 190 QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-- 266 (311)
Q Consensus 190 ~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-- 266 (311)
.+.+++...+++.+++.||.+++++.+++. +.+||.+.....-...|++++++ |++.|+++++|++|.+ |.+
T Consensus 139 ~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~----kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~-GLIa~ 213 (399)
T PF00464_consen 139 GLYFESVPYPVDPDTGLIDYDELEKLAKEH----KPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIA-GLIAG 213 (399)
T ss_dssp HHHSEEEEEEB-TTTSSB-HHHHHHHHHHH------SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTH-HHHHT
T ss_pred cceEEEEeeeeecCCCeECHHHHHHHHhhc----CCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccc-cceeh
Confidence 124677777888668899999999888764 25688877655667789999977 5899999999999986 543
Q ss_pred ---ccCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 267 ---QLALALHRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 267 ---pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
|=.+. .+|++++|.||++.| |+| |+++.+
T Consensus 214 g~~~~P~~--~ADvvt~sThKtl~G-Prg-giI~~~ 245 (399)
T PF00464_consen 214 GLFPNPFP--YADVVTGSTHKTLRG-PRG-GIILTN 245 (399)
T ss_dssp TSS--GCC--TSSEEEEESSGGG-S-SS--EEEEES
T ss_pred heecCccc--cceEEEeeccccccc-cCc-eEEEEc
Confidence 33443 389999999997777 986 777766
No 152
>PRK03321 putative aminotransferase; Provisional
Probab=99.16 E-value=2.2e-10 Score=109.55 Aligned_cols=164 Identities=12% Similarity=0.066 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.++.|+.+|+++|+++++ |++|+|++++++.++..+ +.+||.|+...--... ....++..|.++..+|.+. ++.+
T Consensus 59 ~~~lr~~ia~~~~~~~~~--I~~~~G~~~~l~~~~~~~-~~~gd~Vli~~p~y~~-~~~~~~~~g~~~~~v~~~~-~~~~ 133 (352)
T PRK03321 59 AVELRAALAEHLGVPPEH--VAVGCGSVALCQQLVQAT-AGPGDEVIFAWRSFEA-YPILVQVAGATPVQVPLTP-DHTH 133 (352)
T ss_pred HHHHHHHHHHHhCcCHHH--EEECCCHHHHHHHHHHHh-cCCCCEEEeCCCCHHH-HHHHHHHcCCEEEEccCCC-CCCC
Confidence 568999999999997655 999999999999988876 5789998743211111 1223455699999999864 4568
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH--CCcEEEecccccCc--c-Ccc--cCCCCCCCc-
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVF--G-EDQ--LALALHRPD- 276 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~--G-~~p--ldl~~l~~D- 276 (311)
+.+++++.++++ +++|.++.. -||.++|.+++.+ ++. +++++++|.+..-. + ..+ +..-....+
T Consensus 134 ~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 208 (352)
T PRK03321 134 DLDAMAAAITDR-----TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNV 208 (352)
T ss_pred CHHHHHHhhccC-----CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCE
Confidence 899998888654 456665432 5999999999866 454 59999999987520 1 111 111111234
Q ss_pred EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+++.|+=| .|| ..| +|+++.++++.
T Consensus 209 i~~~S~SK-~~g-~~GlRiG~~v~~~~~~ 235 (352)
T PRK03321 209 VVLRTFSK-AYG-LAGLRVGYAVGHPEVI 235 (352)
T ss_pred EEEecchH-Hhh-hHHHhhhhhcCCHHHH
Confidence 44558889 888 447 89998876543
No 153
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.15 E-value=1.2e-09 Score=106.63 Aligned_cols=157 Identities=9% Similarity=-0.010 Sum_probs=105.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH-HH-HHHHHhCCcEEEEE
Q 021539 122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD-YI-KGFAAQKESKVIAA 198 (311)
Q Consensus 122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~-~~-~~la~~~G~~V~~v 198 (311)
+......++.++++|++.|+. . ++.++|+++|+.++... +++||+|+.. ..+... .+ .....+.++++.+
T Consensus 50 R~~~p~~~~le~~lA~leg~~--~--~v~~~sG~aAi~~~l~~--l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~- 122 (364)
T PRK07269 50 RTKNPTRAKLEETLAAIESAD--Y--ALATSSGMSAIVLAFSV--FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY- 122 (364)
T ss_pred CCCCccHHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHH--hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe-
Confidence 333334457888999999863 3 89999999999988753 4789998643 233321 11 2212222333322
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP 275 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~ 275 (311)
..|.++++++++++ +++|.+.. +-+|.+.|+++|.+ ||++|+++++|.|++. +...-.+ .+++
T Consensus 123 -------~~d~~~l~~~i~~~-----TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~-~~~~~pl-~~ga 188 (364)
T PRK07269 123 -------ANTEEELIAAIEED-----TDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS-PIYQRPI-ELGA 188 (364)
T ss_pred -------cCCHHHHHHhcCcC-----ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCC
Confidence 13678898998765 46665432 35899999999966 6999999999999776 5433333 4689
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
|++++|++| ++|++.. .|+++.++
T Consensus 189 Divv~S~tK-~l~g~~d~~gG~v~~~~ 214 (364)
T PRK07269 189 DIVLHSATK-YLSGHNDVLAGVVVTND 214 (364)
T ss_pred cEEEecCce-eccCCCcccceEEEeCc
Confidence 999999999 6664654 35445443
No 154
>PRK07324 transaminase; Validated
Probab=99.15 E-value=8.6e-10 Score=107.12 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=112.2
Q ss_pred HHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCC-ccc
Q 021539 130 QARNRALKHCG-LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLD-LRI 207 (311)
Q Consensus 130 ~aR~~IA~~Lg-a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~-g~i 207 (311)
+.|+.||++++ +++++ |++|+|+++|+.+++.++ ..+||+|+...--... ....++..|++++.+|.+..+ ..+
T Consensus 66 ~lr~~ia~~~~~~~~~~--vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~-~~~~~~~~g~~v~~v~~~~~~~~~~ 141 (373)
T PRK07324 66 EFKEAVASLYQNVKPEN--ILQTNGATGANFLVLYAL-VEPGDHVISVYPTYQQ-LYDIPESLGAEVDYWQLKEENGWLP 141 (373)
T ss_pred HHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-HHHHHHHcCCEEEEEecccccCCCC
Confidence 78999999885 56554 999999999999999888 5789998643211111 234456679999999986533 346
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc--ccCCCC-CCCcEE
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED--QLALAL-HRPDLV 278 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~--pldl~~-l~~Dfl 278 (311)
+.++|++.++++ ++++.++.. -||.++| +++|.+ |+++|+++++|.+..-.... ..++.. .+-.++
T Consensus 142 d~~~l~~~~~~~-----~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~ 216 (373)
T PRK07324 142 DLDELRRLVRPN-----TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGIS 216 (373)
T ss_pred CHHHHHHhCCCC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEE
Confidence 889998888764 467766533 5999999 666654 68999999999986421111 111111 122466
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+.|+-| .||.| | +|.++..+++
T Consensus 217 ~~s~SK-~~~~~-G~RiG~i~~~~~l 240 (373)
T PRK07324 217 TNSMSK-TYSLP-GIRVGWIAANEEV 240 (373)
T ss_pred Eecchh-hcCCc-cceeEEEecCHHH
Confidence 779999 88844 6 6998876544
No 155
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.14 E-value=3.2e-10 Score=108.16 Aligned_cols=152 Identities=14% Similarity=0.100 Sum_probs=104.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
.+.|+.+++++|+++++ |++|+|+++++..++..+ .+|+.++....++ . ....++..|+++..+| |
T Consensus 50 ~~lr~~la~~~~~~~~~--i~~t~G~~~~i~~~~~~l--~~g~vl~~~p~y~-~-~~~~~~~~g~~~~~~~--------d 115 (330)
T TIGR01140 50 DELRAAAAAYYGLPAAS--VLPVNGAQEAIYLLPRLL--APGRVLVLAPTYS-E-YARAWRAAGHEVVELP--------D 115 (330)
T ss_pred HHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCCeEEEeCCCcH-H-HHHHHHHcCCEEEEeC--------C
Confidence 47999999999987665 999999999999987765 4664334433332 2 3344566799888776 5
Q ss_pred HHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCCC----CCCCcEE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLALA----LHRPDLV 278 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~~Dfl 278 (311)
.++|++.+++ ++++.+ +++-||.++|.+++ .+ |+++|+++++|.++.- .....++. ..+-+++
T Consensus 116 ~~~l~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~i~ 188 (330)
T TIGR01140 116 LDRLPAALEE------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFID-FTPDASLAPQAARFPGLVV 188 (330)
T ss_pred HHHHHhhccc------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccc-cCCccchhhHhccCCCEEE
Confidence 6778777743 234433 33469999996655 33 5789999999999863 21111221 1245699
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.|++| .|| +.| +|+++++++..
T Consensus 189 ~~S~SK-~~g-~~G~R~G~i~~~~~~~ 213 (330)
T TIGR01140 189 LRSLTK-FFG-LAGLRLGFVVAHPALL 213 (330)
T ss_pred EEecch-hhc-CchhhhhheeCCHHHH
Confidence 999999 888 446 59999877543
No 156
>PRK09265 aminotransferase AlaT; Validated
Probab=99.13 E-value=2.9e-09 Score=104.18 Aligned_cols=158 Identities=12% Similarity=0.082 Sum_probs=106.7
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.+|+++ ++++++ |+||+|+++++++++.++ +.+||+|+ +..+|.. +...++..|.++..++.+.
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~v~~~~~~ 150 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVDD--IYIGNGVSELIVMAMQAL-LNNGDEVLVPAPDYPL--WTAAVSLSGGKPVHYLCDE 150 (404)
T ss_pred HHHHHHHHHHhccCCCCCCccc--EEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCCcC--hHHHHHHcCCEEEEEeccc
Confidence 6889999988 777665 999999999999999887 57899876 4444441 2233445688888777653
Q ss_pred C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539 203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLALAL 272 (311)
Q Consensus 203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~ 272 (311)
+ +..++.+++++.++++ +++|.+. ++-||.++| +++|.+ |+++|+++++|-+..-. +.....+..
T Consensus 151 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (404)
T PRK09265 151 EAGWFPDLDDIRSKITPR-----TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS 225 (404)
T ss_pred ccCCCCCHHHHHHhcccc-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH
Confidence 2 3468899999888654 4555443 336999999 666644 68999999999875320 111122222
Q ss_pred CCC--cE-EEEccccCcCCCCCc--eEEEEEe
Q 021539 273 HRP--DL-VLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 273 l~~--Df-l~~S~HK~l~G~P~G--iG~L~vr 299 (311)
+.. .. ++.|+=| .||.| | +|+++..
T Consensus 226 ~~~~~~vi~~~S~SK-~~~~p-GlRiG~~v~~ 255 (404)
T PRK09265 226 LAPDLLCVTFNGLSK-AYRVA-GFRVGWMVLS 255 (404)
T ss_pred cCCCceEEEEecchh-hccCc-ccceEEEEEe
Confidence 222 23 3456679 88745 6 7999863
No 157
>PRK07337 aminotransferase; Validated
Probab=99.13 E-value=9.6e-10 Score=106.71 Aligned_cols=162 Identities=12% Similarity=0.148 Sum_probs=110.7
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|+++ | ++++ +|++|+|+|+|+++++..+ ..+||.|+ ....+... ...++..|.+++.+|.+
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~ 144 (388)
T PRK07337 70 APLREAIAAWYARRFGLDVAPE--RIVVTAGASAALLLACLAL-VERGDEVLMPDPSYPCN--RHFVAAAEGRPVLVPSG 144 (388)
T ss_pred HHHHHHHHHHHHHHhCCCCChH--hEEEecCcHHHHHHHHHHh-cCCCCEEEEeCCCchhh--HHHHHHcCCEEEEeecC
Confidence 46888888887 4 4554 4999999999999999887 57899886 33343321 23344568899999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEeccccc-CccCc--ccCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGL-VFGED--QLALA 271 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQs-v~G~~--pldl~ 271 (311)
.+ +..++.+++++.++++ +++|.++ ++-||..++.++ |.+ |+++|+++++|-+-. + ... +..+.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~-~~~~~~~~~~ 218 (388)
T PRK07337 145 PAERFQLTAADVEAAWGER-----TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGL-SYDAAPVSAL 218 (388)
T ss_pred CccCCcCCHHHHHhhcCcc-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccccc-ccCCCCcChh
Confidence 42 3468899999888764 3555543 336999998654 433 578999999996633 2 211 22332
Q ss_pred CCCCcEE-EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 272 LHRPDLV-LCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 272 ~l~~Dfl-~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.+..+.+ +.|+.| .||.| | +|++++.+++.
T Consensus 219 ~~~~~vi~~~S~SK-~~~~~-G~RiG~~~~~~~l~ 251 (388)
T PRK07337 219 SLGDDVITINSFSK-YFNMT-GWRLGWLVVPEALV 251 (388)
T ss_pred hccCCEEEEEechh-hcCCc-hhheeeeecCHHHH
Confidence 3345555 569999 88734 7 89999876543
No 158
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.13 E-value=1.2e-09 Score=106.71 Aligned_cols=164 Identities=10% Similarity=0.050 Sum_probs=112.5
Q ss_pred HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.||++++ ++++ .+|++|+|+++|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~-~-~~~~~~~~G~~~~~v~~~ 147 (399)
T PRK07681 72 QEFHEAVTEYYNNTHNVILNAD-KEVLLLMGSQDGLVHLPMVY-ANPGDIILVPDPGYT-A-YETGIQMAGATSYYMPLK 147 (399)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEECCCCcc-c-hHHHHHhcCCEEEEEecC
Confidence 468899998885 4542 25999999999999999887 468998863 22332 1 223345679999999986
Q ss_pred CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
.++ ..++.+.+++.+.++ +++|.++ ++=||.+++.++ |.+ |+++++++++|-+.+-. +.....+.
T Consensus 148 ~~~~~~~d~~~l~~~~~~~-----~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~ 222 (399)
T PRK07681 148 KENDFLPDLELIPEEIADK-----AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFL 222 (399)
T ss_pred CCCCCcCCHHHHHHhcccc-----ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChh
Confidence 432 256888888877644 4565554 446999999655 433 58899999999998620 22222322
Q ss_pred C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
. .+..+++-|+.| .|| ..| +|+++..+++.
T Consensus 223 ~~~~~~~~~i~~~S~SK-~~~-~~GlRiG~~i~~~~l~ 258 (399)
T PRK07681 223 SVPGAKEVGVEINSLSK-SYS-LAGSRIGYMIGNEEIV 258 (399)
T ss_pred hCCCCcccEEEEeeccc-ccC-CccceeEEEecCHHHH
Confidence 1 134577889999 888 447 89998776543
No 159
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.13 E-value=5.7e-10 Score=106.93 Aligned_cols=162 Identities=15% Similarity=0.118 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..+.|+.+|+++++++++ |+||+|+++++.+++.++ +++|+.|+... .++ . ....+...|.++..+|.+ ++.
T Consensus 66 ~~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~-~-~~~~~~~~g~~~~~~~~~--~~~ 138 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQ--LLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFS-Q-YRHNAIIEGAEVREVPLK--DGG 138 (359)
T ss_pred HHHHHHHHHHHhCCCHHH--EEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHH-H-HHHHHHHcCCeEEEEecC--CCC
Confidence 457999999999997654 999999999999998887 46889886432 221 1 223345569999999986 456
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHH--CCcEEEecccccCc---cCccc--C-CCCCCC
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHR--NAWHVLLDATGLVF---GEDQL--A-LALHRP 275 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~---G~~pl--d-l~~l~~ 275 (311)
++.+++++.++++ ++++.+. ++-||.++|.+++.+ ++. +|+++++|-+..-. +..+. . +...+.
T Consensus 139 ~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 139 HDLEAMLKAIDEQ-----TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN 213 (359)
T ss_pred cCHHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence 7899998887654 3455443 336999999999865 444 59999999998530 11111 1 122345
Q ss_pred cEEEEccccCcCCCCCce--EEEEEeCCCC
Q 021539 276 DLVLCTLDNNTHAQPLKI--TCLLVRRKSF 303 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~Gi--G~L~vr~~~~ 303 (311)
.+++.|+-| .|| ..|+ |+++..+++.
T Consensus 214 vi~~~S~SK-~~g-~~GlRiG~~v~~~~~~ 241 (359)
T PRK03158 214 LIVLRTFSK-AYG-LAALRVGYGIASEELI 241 (359)
T ss_pred EEEEEechH-hhc-CcchhhehhcCCHHHH
Confidence 688889999 888 4575 9998876544
No 160
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.13 E-value=8.4e-10 Score=107.60 Aligned_cols=168 Identities=15% Similarity=0.144 Sum_probs=111.6
Q ss_pred HHHHHHHHHHcC----CCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 129 IQARNRALKHCG----LSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 129 e~aR~~IA~~Lg----a~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
.+.|+.++++++ +..+ +.+|++|+|+|+|+++++.++ ..+||.|+... .+. . ....++..|.++..+|.+.
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~~~~~~ 146 (391)
T PRK07309 70 LELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI-LEPGDKVLLPAPAYP-G-YEPIVNLVGAEIVEIDTTE 146 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCc-c-hHHHHHHcCCEEEEEecCC
Confidence 467777777764 3211 235999999999999999887 56889886432 222 1 2233455699999998764
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCCC
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALALH 273 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~l 273 (311)
.+..++.+.|+++++...+ +++++.++ ++-||+.++.+ +|.+ |+++++++++|.+..-. |....++..+
T Consensus 147 ~~~~~d~~~l~~~~~~~~~--~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 224 (391)
T PRK07309 147 NDFVLTPEMLEKAILEQGD--KLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY 224 (391)
T ss_pred cCCcCCHHHHHHHhhccCC--CeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh
Confidence 3346889999988864211 24555554 34699998854 4443 58899999999997641 2122233222
Q ss_pred CCc--EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 274 RPD--LVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 274 ~~D--fl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
..| +++.|+.| .||.| | +|+++..+++.
T Consensus 225 ~~~~~i~~~S~SK-~~g~~-GlRvG~~v~~~~~~ 256 (391)
T PRK07309 225 LPDQTILINGLSK-SHAMT-GWRIGLIFAPAEFT 256 (391)
T ss_pred ccCCEEEEecChh-hccCc-cceeEEEEeCHHHH
Confidence 233 88899999 88844 7 88899876553
No 161
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.13 E-value=1.8e-09 Score=104.54 Aligned_cols=164 Identities=12% Similarity=-0.005 Sum_probs=111.5
Q ss_pred HHHHHHHHHHcC----C--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG----L--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg----a--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|++++ . +++ .+|++|+|+++++++++..+ ..+||.|+. ...+.. ....++..|.++..+|.+
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~G~~v~~v~~~ 145 (383)
T TIGR03540 70 LAYRQAVADWYKRRFGVELDPE-TEVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDPGYPV--YRIGTLFAGGEPYEMPLK 145 (383)
T ss_pred HHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEEeCCCCcc--hHHHHHhcCCEEEEEecC
Confidence 367888888763 4 332 25999999999999999987 478998863 333321 122345579999999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccC---ccCcccCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLV---FGEDQLALA 271 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv---~G~~pldl~ 271 (311)
.+ +..++.+++++.++++ +++|.+. ++-||..+|.+ +|.+ |+++++++++|-++.- .+..+.++.
T Consensus 146 ~~~g~~~d~~~l~~~~~~~-----~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~ 220 (383)
T TIGR03540 146 EENGFLPDFDAIPEDIAKK-----AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFL 220 (383)
T ss_pred cccCCccCHHHHHhhcccc-----ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcc
Confidence 43 3356889998887654 3555544 33699999964 4543 6889999999999862 033334432
Q ss_pred CC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 272 LH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 272 ~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.+ +..+++.|+=| .|| ..| +|+++..+++.
T Consensus 221 ~~~~~~~~~i~~~SfSK-~~g-~~GlRiG~~i~~~~l~ 256 (383)
T TIGR03540 221 EVDGAKDVGIEFHSLSK-TYN-MTGWRIGMAVGNADLI 256 (383)
T ss_pred cCCCcccCEEEEEeccc-ccC-CccceeeEEeCCHHHH
Confidence 21 23466677779 998 558 99998776553
No 162
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.12 E-value=3.3e-09 Score=103.23 Aligned_cols=159 Identities=10% Similarity=0.008 Sum_probs=109.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~ 197 (311)
++.-....++.++++|++.|++. .++++|+++|+.++.. + +.+||+|+.. ..+.. ..+....+..|+++..
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 120 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ----GFACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVY 120 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEE
Confidence 33333445688899999999952 4667777899988764 3 4689998633 33332 2234445567999988
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR 274 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~ 274 (311)
++.. |.++++++++++ +++|.+ +.+-+|.+.++++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus 121 vd~~------d~~~l~~~i~~~-----tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~-~~~~~p~-~~g 187 (366)
T PRK08247 121 VNTA------SLKAIEQAITPN-----TKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT-PVLQRPL-EEG 187 (366)
T ss_pred ECCC------CHHHHHHhcccC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-ccccCch-hcC
Confidence 8652 578888888764 456655 3335899999999966 6999999999999865 5433233 357
Q ss_pred CcEEEEccccCcCCCCCc-eEEEEEe
Q 021539 275 PDLVLCTLDNNTHAQPLK-ITCLLVR 299 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G-iG~L~vr 299 (311)
+|+++.|+.| ++|++.+ +|.+++.
T Consensus 188 ~di~i~S~sK-~~~g~~d~~~G~iv~ 212 (366)
T PRK08247 188 ADIVIHSATK-YLGGHNDVLAGLVVA 212 (366)
T ss_pred CcEEEeecce-eccCCCceeeeEEec
Confidence 9999999999 6664654 3444443
No 163
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.11 E-value=4.5e-09 Score=105.15 Aligned_cols=155 Identities=8% Similarity=0.007 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-h-HHHHHHHHhCCcEEEEEeCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-S-DYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-~-~~~~~la~~~G~~V~~vp~~~ 202 (311)
...+.-.+.+|++.|+. . .+.|+|+|.|+.+++.++ +++||+|++... +. . ........+.|+++.++..
T Consensus 61 Ptv~~lE~~la~leg~~--~--av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~-- 133 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV--G--AVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP-- 133 (432)
T ss_pred cHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC--
Confidence 33556788899999984 2 778999999999988877 689999875433 22 1 1222334667999988854
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--CCCCcE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA--LHRPDL 277 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~--~l~~Df 277 (311)
.+|+++++++++++ |++|.+..- -++.+.|+++|.+ ||++|+++++|+|-+. |+-.+ ++++|+
T Consensus 134 ---~~d~~~l~~~I~~~-----Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P~~~~pl~~GADI 201 (432)
T PRK06702 134 ---NLTADEIVALANDK-----TKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----PYLCQAFEHGANI 201 (432)
T ss_pred ---CCCHHHHHHhCCcC-----CeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----hhhCChhhcCCCE
Confidence 25778899999876 456554322 5899999999976 6999999999999654 33333 578999
Q ss_pred EEEccccCcCCCCCceEEEEEe
Q 021539 278 VLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 278 l~~S~HK~l~G~P~GiG~L~vr 299 (311)
++-|.-||+-|.--++|.+++.
T Consensus 202 vv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 202 IVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred EEEccccccCCCcceeceEEEe
Confidence 9999999655644467777764
No 164
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.11 E-value=6.9e-10 Score=105.81 Aligned_cols=158 Identities=16% Similarity=0.128 Sum_probs=110.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
++.|+.||+++++++++ |++|+|+++++++++.++ ..+||.|+.. ..+ .+ ....++..|+++..+|.+. ++.+
T Consensus 63 ~~lr~aia~~~~~~~~~--I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y-~~-~~~~~~~~g~~~~~v~~~~-~~~~ 136 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQ--VFVGNGSDEVLAHAFLAF-FNHDRPLLFPDITY-SF-YPVYAGLYGIPYEEIPLDD-DFSI 136 (353)
T ss_pred HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEeCCCH-HH-HHHHHHHcCCEEEEeecCC-CCCC
Confidence 48999999999998765 999999999999999987 4789988633 232 12 2333556799999999864 5668
Q ss_pred CHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHC-CcEEEecccccCccCc-ccCC-CCCCCcEEEEc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRN-AWHVLLDATGLVFGED-QLAL-ALHRPDLVLCT 281 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~-g~~vlvDAaQsv~G~~-pldl-~~l~~Dfl~~S 281 (311)
|.+++++ + ++++.+ +++-||.++|.+++.+ ++.. ++++++|-+.+-.+.. ...+ +..+-.+++.|
T Consensus 137 d~~~l~~----~-----~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S 207 (353)
T PRK05387 137 DVEDYLR----P-----NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQT 207 (353)
T ss_pred CHHHHHh----c-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEe
Confidence 8887752 2 133433 2336999999999866 4443 9999999875421211 1111 22344799999
Q ss_pred cccCcCCCCCc--eEEEEEeCCCC
Q 021539 282 LDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 282 ~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.| .||.| | +|+++.+++..
T Consensus 208 ~SK-~~~~~-GlR~G~~~~~~~~~ 229 (353)
T PRK05387 208 FSK-SRSLA-GLRVGFAIGHPELI 229 (353)
T ss_pred hhH-hhcch-hhhceeeecCHHHH
Confidence 999 88733 5 89999876543
No 165
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.10 E-value=3.6e-10 Score=107.52 Aligned_cols=184 Identities=15% Similarity=0.142 Sum_probs=119.3
Q ss_pred cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHH-
Q 021539 105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDY- 183 (311)
Q Consensus 105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~- 183 (311)
..+.+........+|.+.... ++++++|+++||.+ . .+|++++|.|+.+++..+. ++++.|++...-|...
T Consensus 11 m~~a~~~a~~gd~~Yg~D~~~---~~l~~~i~~l~g~e--~--a~f~~sGT~An~~al~~~~-~~~~~vi~~~~aHi~~~ 82 (290)
T PF01212_consen 11 MLEAMAAANVGDDAYGEDPTT---ARLEERIAELFGKE--A--ALFVPSGTMANQLALRAHL-RPGESVICADTAHIHFD 82 (290)
T ss_dssp EEHHHHHTTSB-CCTTSSHHH---HHHHHHHHHHHTSS--E--EEEESSHHHHHHHHHHHHH-HTTEEEEEETTEHHHHS
T ss_pred HHHHHHccccCCcccCCChhH---HHHHHHHHHHcCCC--E--EEEeCCCChHHHHHHHHHH-hcCCceeccccceeeee
Confidence 334444444344466554443 47889999999984 2 6799999999999888775 5677776543323110
Q ss_pred -HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc-cc--cchhcHHHHH---H-HHHCCcEE
Q 021539 184 -IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV-VN--GTRYSMHWIS---E-AHRNAWHV 254 (311)
Q Consensus 184 -~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~-~t--G~i~Pi~~I~---~-a~~~g~~v 254 (311)
-.......|+++..++... +|.+++++|++.+++...+ .++++|+++.. +. |+++++++|. + ||++|+++
T Consensus 83 E~ga~~~~~G~~~~~l~~~~-~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~l 161 (290)
T PF01212_consen 83 ETGAIEELSGAKLIPLPSDD-DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPL 161 (290)
T ss_dssp STTHHHHHTTCEEEEEBECT-GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EE
T ss_pred ccchhhHhcCcEEEECCCcc-cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEE
Confidence 0111223699998888763 4899999999999863211 23678888755 45 9999998873 3 58999999
Q ss_pred Eeccccc------CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 255 LLDATGL------VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 255 lvDAaQs------v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
|+||+=. . |..+-++. ..+|.++||+.| -+|.| +=++|..+++
T Consensus 162 hmDGARl~~a~~~~-~~~~~e~~-~~~D~v~~~~tK-~~g~~-~Gavl~~~~~ 210 (290)
T PF01212_consen 162 HMDGARLANAAAAL-GVSLAEIA-AGADSVSFGGTK-NGGAP-GGAVLAGNKE 210 (290)
T ss_dssp EEEETTHHHHHCHH-HHHHHHHH-TTSSEEEEETTS-TT-SS-SEEEEEESHH
T ss_pred EEehhhHHHhhhcc-cccHHHHh-hhCCEEEEEEEc-ccccc-cceEEEechH
Confidence 9999932 3 43444444 479999999999 55545 4566666654
No 166
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.10 E-value=2.8e-09 Score=104.30 Aligned_cols=160 Identities=16% Similarity=0.070 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..+.|+.+|++++. +++ +|++|+|+|+|+.+++.++. .+|+.|+ ...++. .+...++..|+++..++.
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~--~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~~ 149 (403)
T TIGR01265 75 ALAAREAVAEYLSSDLPGKLTAD--DVVLTSGCSQAIEICIEALA-NPGANILVPRPGFP--LYDTRAAFSGLEVRLYDL 149 (403)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHH--HEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCch--hHHHHHHHcCCEEEEecC
Confidence 45789999999985 333 59999999999999999885 6889876 333322 123345667999988887
Q ss_pred CC-CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCC
Q 021539 201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLAL 270 (311)
Q Consensus 201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl 270 (311)
+. .++.++.++++++++++ ++++.+++ +-||+++| +++|.+ |+++|+++++|.+..-. +.....+
T Consensus 150 ~~~~~~~~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (403)
T TIGR01265 150 LPEKDWEIDLDGLEALADEK-----TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPM 224 (403)
T ss_pred CcccCCccCHHHHHHHhCcC-----ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccch
Confidence 43 24568999999888754 35555543 36999987 555644 68999999999996521 1111223
Q ss_pred CCCCC---cEEEEccccCcCCCCCc--eEEEEEe
Q 021539 271 ALHRP---DLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 271 ~~l~~---Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
..+.. =.++.|+=| .|+.| | +|++++.
T Consensus 225 ~~~~~~~~vi~~~S~SK-~~~~p-GlRiG~~v~~ 256 (403)
T TIGR01265 225 ASFASIVPVLSLGGISK-RWVVP-GWRLGWIIIH 256 (403)
T ss_pred hhhccCCcEEEEeeccc-ccCCC-cceEEEEEEe
Confidence 22222 256679999 87756 5 8998874
No 167
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.09 E-value=3.7e-10 Score=108.55 Aligned_cols=161 Identities=16% Similarity=0.035 Sum_probs=110.5
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.+.|+.+|+++|+++++ |++|+|+++++++++.++. .+| +.|+...-... .....++..|++++.+|.+. +..+
T Consensus 63 ~~Lr~aia~~~~~~~~~--I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~-~y~~~~~~~g~~v~~v~~~~-~~~~ 137 (354)
T PRK04635 63 PELINAYSAYAGVAPEQ--ILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYG-MYAISAETFNVGVKALPLTA-DYQL 137 (354)
T ss_pred HHHHHHHHHHhCcCHHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH-HHHHHHHHcCCEEEEEecCC-CCCC
Confidence 37899999999998765 9999999999999999884 566 77763221111 23344566799999999864 4567
Q ss_pred CHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHH-CCcEEEecccccCccCcc---cCCCCC-CCcEEE
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHR-NAWHVLLDATGLVFGEDQ---LALALH-RPDLVL 279 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~G~~p---ldl~~l-~~Dfl~ 279 (311)
+.+.++. + ++ +++|.++. +-||+++|.+++.+ ++. .++++++|.++.- -... .++... .-=+++
T Consensus 138 ~~~~l~~-~-~~-----~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv~ 209 (354)
T PRK04635 138 PLDYIEQ-L-DG-----AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVVL 209 (354)
T ss_pred CHHHHHh-c-cC-----CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEEE
Confidence 8887763 3 23 45665542 25999999999966 443 4699999999753 2111 111110 111467
Q ss_pred EccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 280 CTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 280 ~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
-|++| +|| +.| +|+++++++..+
T Consensus 210 ~S~SK-~~~-l~GlRlG~~i~~~~~~~ 234 (354)
T PRK04635 210 RTLSK-AFA-LAGARCGFTLANEELIE 234 (354)
T ss_pred echHH-Hhh-hhHHHHhhhhCCHHHHH
Confidence 79999 888 557 799998876544
No 168
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.09 E-value=1.4e-09 Score=106.07 Aligned_cols=162 Identities=15% Similarity=0.093 Sum_probs=114.0
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.+.|+.||+++|+++++ |++|+|++++++++...+ ..+|+.|+.. ..+. .....++..|+++..+|.+. +..+
T Consensus 89 ~~lr~~ia~~~~~~~~~--I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~--~y~~~~~~~g~~~~~v~~~~-~~~~ 162 (380)
T PLN03026 89 RRLRAALAEDSGLESEN--ILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFG--MYVFDAAVNGAEVIKVPRTP-DFSL 162 (380)
T ss_pred HHHHHHHHHHhCcChhh--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCEEEEeecCC-CCCc
Confidence 47999999999998765 999999999999998887 4689988632 2321 12233455799999998864 4568
Q ss_pred CHHHHHhhh-hccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cC-cccC-CCCCCCcEEEEc
Q 021539 208 KGSQLSQNF-RRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GE-DQLA-LALHRPDLVLCT 281 (311)
Q Consensus 208 d~~~L~~~l-~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~-~pld-l~~l~~Dfl~~S 281 (311)
+.++|++.+ ..+ ++++.+. ++-||+++|.+++.++-+..+++++|.+..-. +. ..+. +...+-.+++.|
T Consensus 163 d~~~l~~~~~~~~-----~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~S 237 (380)
T PLN03026 163 DVPRIVEAVETHK-----PKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRT 237 (380)
T ss_pred CHHHHHHHHhccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEec
Confidence 999998888 333 4555543 33699999999997753334899999996420 10 1111 222345688999
Q ss_pred cccCcCCCCCc--eEEEEEeCCCC
Q 021539 282 LDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 282 ~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+-| .|| ..| +|+++..++.+
T Consensus 238 fSK-~~g-laGlRiGy~~~~~~~i 259 (380)
T PLN03026 238 FSK-RAG-LAGLRVGYGAFPLSII 259 (380)
T ss_pred chH-hhc-CccccceeeecCHHHH
Confidence 999 998 557 68877665443
No 169
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.08 E-value=1.5e-09 Score=105.76 Aligned_cols=163 Identities=12% Similarity=0.046 Sum_probs=108.0
Q ss_pred HHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.+|+++ |. +++ ..|++|+|+++|+.+++..+ +.+||.|+ ....+.. ....+...|.++..+|.+.
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~ 152 (394)
T PRK05942 77 SFRQAITDWYHRRYGVELDPD-SEALPLLGSKEGLTHLALAY-VNPGDVVLVPSPAYPA--HFRGPLIAGAQIYPIILKP 152 (394)
T ss_pred HHHHHHHHHHHHHHCCCcCCC-CeEEEccChHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEeecCC
Confidence 6788888877 43 343 24889999999999999887 57899986 3333332 1122344689999998864
Q ss_pred C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccC---
Q 021539 203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLA--- 269 (311)
Q Consensus 203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pld--- 269 (311)
. +..++.+++++.+.++ ++++.++ ++-||.++|.+ +|.+ |+++|+++++|.+..-. +.....
T Consensus 153 ~~~~~~d~~~l~~~~~~~-----~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 227 (394)
T PRK05942 153 ENDWLIDLSSIPEEVAQQ-----AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLE 227 (394)
T ss_pred ccCCccCHHHHHHhcccc-----ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhh
Confidence 2 2358999998888654 4555543 33699999954 5544 68899999999985420 111122
Q ss_pred CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 270 LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 270 l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.. .+..+++.|+=| .|| ..| +|+++.++++.
T Consensus 228 ~~~~~~~~i~~~SfSK-~~~-~~GlRiG~i~~~~~l~ 262 (394)
T PRK05942 228 IPGAKDIGVEFHTLSK-TYN-MAGWRVGFVVGNRHII 262 (394)
T ss_pred CCCccccEEEEecchh-ccC-ChhhheeeeecCHHHH
Confidence 211 123455667779 887 347 89999876554
No 170
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.08 E-value=9.5e-09 Score=99.68 Aligned_cols=161 Identities=16% Similarity=0.183 Sum_probs=106.9
Q ss_pred HHHHHHHHHHc-----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 129 IQARNRALKHC-----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 129 e~aR~~IA~~L-----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
.+.|+.+|+++ +++++ +|++|+|+|+|+++++..+ +.+|+.|+...-+..+. ...++..|+++..++.+..
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~v~~~~~ 144 (397)
T PRK07568 69 PELREAFAKYYKKWGIDVEPD--EILITNGGSEAILFAMMAI-CDPGDEILVPEPFYANY-NGFATSAGVKIVPVTTKIE 144 (397)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEcCChHHHHHHHHHHh-cCCCCEEEEecCCCccH-HHHHHHcCCEEEEeecCcc
Confidence 47888999987 46655 4999999999999999887 57899886433222222 2334556999999987532
Q ss_pred Ccc--cCHHHHHhhhhccCCCCCceEEEEec--ccccchhcH---HHHHH-HHHCCcEEEecccccCc---cCccc---C
Q 021539 204 DLR--IKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF---GEDQL---A 269 (311)
Q Consensus 204 ~g~--id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~---G~~pl---d 269 (311)
++. .+.++|++.++++ +++|.++. +-||.++|. ++|.+ |+++|+++++|.+..-. +.... +
T Consensus 145 ~g~~~~~~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~ 219 (397)
T PRK07568 145 EGFHLPSKEEIEKLITPK-----TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALS 219 (397)
T ss_pred cCCCCCCHHHHHHhcCcc-----ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhh
Confidence 332 2468888888654 45665543 369999975 45544 68999999999986521 11111 2
Q ss_pred CCC-CCCcEEEEccccCcCCCC-CceEEEEEe
Q 021539 270 LAL-HRPDLVLCTLDNNTHAQP-LKITCLLVR 299 (311)
Q Consensus 270 l~~-l~~Dfl~~S~HK~l~G~P-~GiG~L~vr 299 (311)
+.. .+--+++-|+.| .||.| ..+|+++..
T Consensus 220 ~~~~~~~~i~~~S~SK-~~~~~G~R~G~~~~~ 250 (397)
T PRK07568 220 LEGLEDRVIIIDSVSK-RYSACGARIGCLISK 250 (397)
T ss_pred cCCCcCCEEEEecchh-hccCCCcceEEEecC
Confidence 211 112267789999 88733 238888764
No 171
>PRK07550 hypothetical protein; Provisional
Probab=99.07 E-value=2.2e-09 Score=104.10 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=106.6
Q ss_pred HHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-
Q 021539 130 QARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW- 202 (311)
Q Consensus 130 ~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~- 202 (311)
+.|+.++++++ ++++ +|++|+|+++|+.+++..+ ..+||.|+...=...+. ...++..|.++..++.+.
T Consensus 71 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~v~~~~~ 146 (386)
T PRK07550 71 ELREAYAAHYSRLYGAAISPE--QVHITSGCNQAFWAAMVTL-AGAGDEVILPLPWYFNH-KMWLDMLGIRPVYLPCDEG 146 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch-HHHHHhcCCEEEEEecCCC
Confidence 56666666653 4444 5999999999999999987 46899986432111111 223456799999999863
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCC-
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALAL- 272 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~- 272 (311)
.+..++.+++++.++++ +++|.+ +++-||.++|.+ +|.+ |+++|+++++|.+.+-. +..+..+..
T Consensus 147 ~~~~~~~~~l~~~~~~~-----~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~ 221 (386)
T PRK07550 147 PGLLPDPAAAEALITPR-----TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD 221 (386)
T ss_pred cCCCCCHHHHHHHhccc-----CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence 24457889999988764 334333 333599999854 5544 68899999999986520 111111111
Q ss_pred ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
..-.+++.|+.| .+|.| | +|+++..++.+
T Consensus 222 ~~~~~~~i~~~S~SK-~~g~~-G~RiG~i~~~~~~~ 255 (386)
T PRK07550 222 PDWDDTLVHLYSFSK-SYALT-GHRVGAVVASPARI 255 (386)
T ss_pred CCccccEEEEecchh-hccCc-ccceEeeecCHHHH
Confidence 112467899999 77733 5 99998876543
No 172
>PRK07683 aminotransferase A; Validated
Probab=99.06 E-value=4.7e-09 Score=102.26 Aligned_cols=164 Identities=15% Similarity=0.119 Sum_probs=111.7
Q ss_pred HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 129 IQARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 129 e~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
.+.|+.+|+++ |. +++ .+|++|+|+|+|+.++...+ +.+|+.|+...-...+ ....++..|+++..+|.+.
T Consensus 68 ~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~~~~~~ 144 (387)
T PRK07683 68 LELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAPIYPG-YEPIIRLCGAKPVFIDTRS 144 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCccc-hHHHHHHcCCEEEEeecCc
Confidence 46888888887 33 444 14999999999999999887 5789988643221112 2233455699999998865
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCc--cCcccCCCCC-
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF--GEDQLALALH- 273 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~l- 273 (311)
.+..++.+.+++.++++ ++++.++. +-||..++.+ +|.+ |+++|+++++|.+..-. +..+..+..+
T Consensus 145 ~~~~~~~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 219 (387)
T PRK07683 145 TGFRLTAEALENAITEK-----TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFP 219 (387)
T ss_pred ccCCCCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhcc
Confidence 34456788888888654 35555542 3699998854 4434 58899999999997741 1112223222
Q ss_pred ---CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 274 ---RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 274 ---~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+-.+++.|+=| .||.| | +|+++..+++
T Consensus 220 ~~~~~vi~~~s~SK-~~~~p-GlRiG~i~~~~~l 251 (387)
T PRK07683 220 EMREKTIVINGLSK-SHSMT-GWRIGFLFAPSYL 251 (387)
T ss_pred CCcCCeEEEeeccc-cccCc-cceeEEEEcCHHH
Confidence 23588899999 88855 6 8999887654
No 173
>PRK08363 alanine aminotransferase; Validated
Probab=99.06 E-value=5.9e-09 Score=101.70 Aligned_cols=159 Identities=14% Similarity=0.099 Sum_probs=104.7
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEE-eC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAA-PE 200 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~v-p~ 200 (311)
.+.|+.+++++ | ++++ +|++|+|+|+|+.++..++ ..+||.|+.. ..+.. ....++..|.++..+ +.
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~v~~~~~ 147 (398)
T PRK08363 73 PELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGPSYPP--YTGLVKFYGGVPVEYRTI 147 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEeccc
Confidence 36888888887 3 4554 5999999999999999888 6789998643 33321 223445567777666 45
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCc--cCcccCCCC
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--GEDQLALAL 272 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~ 272 (311)
+.++..++.++|++.++++ ++++.+.. +-||..+| +++|.+ |+++|+++++|.+..-. ......+..
T Consensus 148 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~ 222 (398)
T PRK08363 148 EEEGWQPDIDDIRKKITEK-----TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGS 222 (398)
T ss_pred cccCCcCCHHHHHhhCCcc-----eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHH
Confidence 4334467888898888654 45665543 25999999 555644 68899999999986520 001111111
Q ss_pred CC---CcEEEEccccCcCCCC-CceEEEEE
Q 021539 273 HR---PDLVLCTLDNNTHAQP-LKITCLLV 298 (311)
Q Consensus 273 l~---~Dfl~~S~HK~l~G~P-~GiG~L~v 298 (311)
+. -=+++.|+.| .|+.| .++|++++
T Consensus 223 ~~~~~~vi~~~SfSK-~~~~~GlRiG~~~~ 251 (398)
T PRK08363 223 LTKDVPVIVMNGLSK-VYFATGWRLGYIYF 251 (398)
T ss_pred cCcCCcEEEEecchh-ccCCccceEEEEEE
Confidence 11 1255679999 76534 24899998
No 174
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.05 E-value=4.7e-09 Score=108.95 Aligned_cols=194 Identities=15% Similarity=0.086 Sum_probs=122.3
Q ss_pred cccchhHHHHh---cCCC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH---HHhc---CCC--C
Q 021539 103 QLEPSRLLDIL---SKKT--SFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLM---IGES---YPF--F 168 (311)
Q Consensus 103 ~~~~~~l~~~l---~~~s--s~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnl---v~~s---~~~--~ 168 (311)
...++-+-+++ .|++ ++. +..++.+++++=+.+++++|.++.. =+||+|+|+|+-. +++. +|+ +
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~--G~~TsGGT~ANl~aL~~AR~~k~~p~a~~ 171 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGW--GHIVADGSLANLEGLWYARNIKSLPFAMK 171 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCC--eEEeCChHHHHHHHHHHHHHhhhccchhh
Confidence 34666666654 4544 332 3344455568999999999997533 5699999999754 3332 110 0
Q ss_pred -------------------------------------------CCC------EEEEccCcChHHHHHHHHhCCc---EEE
Q 021539 169 -------------------------------------------KGN------YYLTIISEESDYIKGFAAQKES---KVI 196 (311)
Q Consensus 169 -------------------------------------------~Gd------~Ils~~eh~~~~~~~la~~~G~---~V~ 196 (311)
.|. .++++...|.. +...+.-.|. .|+
T Consensus 172 ~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS-~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 172 EVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS-WLKAADIIGIGLDQVI 250 (608)
T ss_pred hccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHH-HHHHHHHcCCCcccEE
Confidence 000 23444442322 3333444566 588
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCC-CCc-eEEEEecc-cccchhcHHHHHHH----HHCCc--EEEecccccCccC--
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKY-TPK-GLFSYPVV-VNGTRYSMHWISEA----HRNAW--HVLLDATGLVFGE-- 265 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~-~~t-~LVs~~~~-~tG~i~Pi~~I~~a----~~~g~--~vlvDAaQsv~G~-- 265 (311)
.||++. ++++|.+.|++.|++.... .++ .+|++... .+|.+=||++|.++ +++|+ ++|||||-.. --
T Consensus 251 ~VpvD~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG-~~~~ 328 (608)
T TIGR03811 251 PVPVDS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGG-YGRA 328 (608)
T ss_pred EeecCC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccc-hhhh
Confidence 899986 7899999999888752111 112 23443333 69999999999663 46786 6999998663 11
Q ss_pred ---------cccC-----------C---------------C-CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 266 ---------DQLA-----------L---------------A-LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 266 ---------~pld-----------l---------------~-~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+|.+ + + --++|-+++.+|| |+..|.++|+|++|+..
T Consensus 329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK-~g~~Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK-MGYIPYSAGGIVIQDIR 400 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc-ccccCCCeEEEEEeCHH
Confidence 1110 1 0 1369999999999 55559999999999753
No 175
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.05 E-value=1.4e-08 Score=99.74 Aligned_cols=178 Identities=13% Similarity=0.058 Sum_probs=122.6
Q ss_pred cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH
Q 021539 105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI 184 (311)
Q Consensus 105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~ 184 (311)
+-..+.+.+...--..|.+.+. --+.+|+++|+. . .+.|+|+|.|+.+.+.++...+||.|+++.--.....
T Consensus 17 e~~~v~~vl~sg~i~~G~~v~~----FE~~~ae~~G~k--~--ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa 88 (374)
T COG0399 17 ELAAVQEVLKSGWLTGGPFVRR----FEQAFAEYLGVK--Y--AVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA 88 (374)
T ss_pred HHHHHHHHHHcCCeecChHHHH----HHHHHHHHhCCC--e--EEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH
Confidence 5555666664432223777764 334789999994 3 8899999999999999777889999864332221111
Q ss_pred HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539 185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF 263 (311)
Q Consensus 185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~ 263 (311)
.. .-..|++.+++.++.++..+|.+.|++.|.+++ +.++.+. .-|..-+++.|.+ |+++|++++-||+|++
T Consensus 89 n~-i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~t----KAIipVh--l~G~~~dm~~i~~la~~~~l~vIEDaAqa~- 160 (374)
T COG0399 89 NA-VLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRT----KAIIPVH--LAGQPCDMDAIMALAKRHGLPVIEDAAQAH- 160 (374)
T ss_pred HH-HHHcCCeEEEEecCCcccCCCHHHHHHHcccCC----eEEEEeh--hccCCCCHHHHHHHHHHcCCeEEEEcchhc-
Confidence 11 123599999999998778899999999999863 3444422 4799999999966 6999999999999999
Q ss_pred cCcccCCCC-CCCcEEEEccc--cCcCCCCCceEEEEEeCC
Q 021539 264 GEDQLALAL-HRPDLVLCTLD--NNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 264 G~~pldl~~-l~~Dfl~~S~H--K~l~G~P~GiG~L~vr~~ 301 (311)
|..--+=.. .--|+-+||+| | .++ .|=|++++.++
T Consensus 161 Ga~y~gk~vGt~Gd~~~fSF~~~K-~it--tgEGGav~tnd 198 (374)
T COG0399 161 GATYKGKKVGSFGDIGAFSFHATK-NLT--TGEGGAVVTND 198 (374)
T ss_pred cCeecCcccccccceEEEEecCCC-Ccc--ccCceEEEeCC
Confidence 855432111 11355555554 7 554 46566665543
No 176
>PRK12414 putative aminotransferase; Provisional
Probab=99.03 E-value=1.5e-08 Score=98.52 Aligned_cols=167 Identities=10% Similarity=0.082 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 127 PEIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
..+..++.+++++|++.+ +.+|++|+|+++|+.+++.++ +.+||.|+. ...+.. ....++..|.++..+|.+..+
T Consensus 71 lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~ 147 (384)
T PRK12414 71 LREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL-VHPGDEVIYFEPSFDS--YAPIVRLQGATPVAIKLSPED 147 (384)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh-cCCCCEEEEeCCCccc--hHHHHHHcCCEEEEEecCccc
Confidence 335566666677787521 124999999999999999887 578999863 334331 223344568999999987545
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcH---HHHHH-HHHCCcEEEecccccCc--cCccc-CCCCC--
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF--GEDQL-ALALH-- 273 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~--G~~pl-dl~~l-- 273 (311)
..++.+.|++.++++ +++|.++ ++-||.+++- ++|.+ |+++|+++++|.+..-. ...+. .+..+
T Consensus 148 ~~~d~~~l~~~l~~~-----~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 222 (384)
T PRK12414 148 FRVNWDEVAAAITPR-----TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE 222 (384)
T ss_pred cccCHHHHHhhcCcc-----cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC
Confidence 568999999888754 4566554 3369998764 45543 58899999999997520 11111 22221
Q ss_pred --CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 274 --RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 274 --~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+--+++.|+-| .||.| | +|+++..+++.
T Consensus 223 ~~~~~i~~~SfSK-~~~~p-GlRiG~~v~~~~l~ 254 (384)
T PRK12414 223 LAERSVIVSSFGK-SYHVT-GWRVGYCLAPAELM 254 (384)
T ss_pred ccCcEEEEecccc-cccCc-cceEEEEecCHHHH
Confidence 12389999999 88734 6 69998876543
No 177
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.02 E-value=6.7e-09 Score=100.60 Aligned_cols=164 Identities=13% Similarity=0.049 Sum_probs=110.6
Q ss_pred HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|+++ |. +++ ..|++|+|+++++++++..+ ..+||.|+. ...+.. ....++..|.++..+|.+
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~-~~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~~~~v~~~ 147 (385)
T PRK09276 72 LEFRKAVADWYKRRFGVELDPE-TEVISLIGSKEGIAHIPLAF-VNPGDVVLVPDPGYPV--YKIGTIFAGGEPYFMPLK 147 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcC--hHHHHHHcCCEEEEEecC
Confidence 46888888887 44 333 24999999999999999887 478998863 223221 223345569999999986
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
.+ +..++.+++++.+..+ +++|.++ ++-||.++|.++ |.+ |+++++++++|-+..-. ++....+.
T Consensus 148 ~~~g~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (385)
T PRK09276 148 EENGFLPDLDAIPEDVAKK-----AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFL 222 (385)
T ss_pred CCCCCcCCHHHHHHhcccc-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChh
Confidence 43 2346888888777654 3555543 336999999754 433 58899999999998631 22222322
Q ss_pred C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
. .+..+++.|+=| .|| ..| +|+++..+++.
T Consensus 223 ~~~~~~~~~i~~~S~SK-~~g-~~GlRiG~~i~~~~l~ 258 (385)
T PRK09276 223 EVPGAKDVGIEFHSLSK-TYN-MTGWRIGFAVGNADLI 258 (385)
T ss_pred ccCCCcCCEEEEecchh-hcC-CcchhheeeeCCHHHH
Confidence 1 133467778889 998 558 99998776543
No 178
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.01 E-value=1.2e-08 Score=102.16 Aligned_cols=177 Identities=12% Similarity=0.056 Sum_probs=116.9
Q ss_pred HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHH
Q 021539 109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFA 188 (311)
Q Consensus 109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la 188 (311)
+..|....++|.+..-. .+.|+.|++++|.+ . +++|+|+|+|++++...+ .++||.|++. -|... .....
T Consensus 39 ~~a~~~gd~~Y~~~~g~---~~Leeaia~~~g~~--~--vv~t~~Gt~Al~la~~al-~~pGD~V~~~-~~f~~-~~~~i 108 (431)
T cd00617 39 WAAMMLGDEAYAGSKSF---YDLEDAVQDLFGFK--H--IIPTHQGRGAENILFSIL-LKPGRTVPSN-MHFDT-TRGHI 108 (431)
T ss_pred HHHHHhCCCccCCCCCH---HHHHHHHHHHHCCC--e--EEEcCCHHHHHHHHHHHh-CCCCCEEccC-Ccccc-hHHHH
Confidence 33344555677665543 36788899999984 3 999999999999988877 5789987522 22211 11223
Q ss_pred HhCCcEEEEEeCCCC---------CcccCHHHHHhhhhccCCCCCceEEEE--ecccc-cchhcHHHH---HH-HHHCCc
Q 021539 189 AQKESKVIAAPETWL---------DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVN-GTRYSMHWI---SE-AHRNAW 252 (311)
Q Consensus 189 ~~~G~~V~~vp~~~~---------~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~t-G~i~Pi~~I---~~-a~~~g~ 252 (311)
...|.++..++++.. .+.+|+++|+++++++.. ..+++|++ +.+.+ |...+++.+ .+ |+++|+
T Consensus 109 ~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~-~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi 187 (431)
T cd00617 109 EANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA-ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGI 187 (431)
T ss_pred HhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC-CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 345888888887531 356899999999986421 12455554 44444 898877654 44 689999
Q ss_pred EEEecccccCcc-----------CcccCCCC------CCCcEEEEccccCcCCCCCceEE-EEEeC
Q 021539 253 HVLLDATGLVFG-----------EDQLALAL------HRPDLVLCTLDNNTHAQPLKITC-LLVRR 300 (311)
Q Consensus 253 ~vlvDAaQsv~G-----------~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~-L~vr~ 300 (311)
+++.|++|++ + .....+.+ .-.|.+++|+|| -.+.| +|. ++.++
T Consensus 188 ~li~DaAr~~-~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K-~~~~~--~GG~i~~~d 249 (431)
T cd00617 188 PVVLDAARFA-ENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKK-DGLVN--IGGFLALRD 249 (431)
T ss_pred EEEEEchhhH-hhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeec-CCCCc--cceEEEeCc
Confidence 9999999986 4 22222211 248999999999 44434 464 55544
No 179
>PRK07777 aminotransferase; Validated
Probab=99.01 E-value=1.1e-08 Score=99.26 Aligned_cols=163 Identities=17% Similarity=0.074 Sum_probs=108.3
Q ss_pred HHHHHHHHH----cCCC--CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKH----CGLS--EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~----Lga~--~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.++++ .|.+ ++ .+|++|+|+|+|+.+++.++ ..+||.|+.. ..++ . ....++..|.++..+|.+.
T Consensus 65 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p~y~-~-~~~~~~~~g~~~~~~~~~~ 140 (387)
T PRK07777 65 ELRAAIAAQRRRRYGLEYDPD-TEVLVTVGATEAIAAAVLGL-VEPGDEVLLIEPYYD-S-YAAVIAMAGAHRVPVPLVP 140 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch-h-hHHHHHHCCCEEEEeecCC
Confidence 466666654 5654 33 14999999999999988877 4688988643 2332 2 2233445688888888764
Q ss_pred C--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cC--cccC
Q 021539 203 L--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GE--DQLA 269 (311)
Q Consensus 203 ~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~--~pld 269 (311)
. +..++.++|++.++++ +++|.++ ++-||..++.+ +|.+ |+++++++++|-+..-. +. .++.
T Consensus 141 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 141 DGRGFALDLDALRAAVTPR-----TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ccCCCcCCHHHHHHhcCcc-----cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence 2 2358999999888754 4565554 33699998854 4443 68899999999887520 11 1221
Q ss_pred -CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 270 -LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 270 -l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.. .+.++++.|+.| .||.| | +|+++..+++.
T Consensus 216 ~~~~~~~~~i~~~S~SK-~~g~~-GlRiG~~~~~~~l~ 251 (387)
T PRK07777 216 TLPGMRERTVTISSAAK-TFNVT-GWKIGWACGPAPLI 251 (387)
T ss_pred hCCCCcCcEEEEeechh-hccCc-CceeEEEecCHHHH
Confidence 111 346899999999 88844 7 69888776543
No 180
>PRK07682 hypothetical protein; Validated
Probab=99.00 E-value=3.6e-09 Score=102.22 Aligned_cols=164 Identities=10% Similarity=0.047 Sum_probs=111.5
Q ss_pred HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+|++++ +++++ +|++|+|+++|+.+++.++ .++||.|+. ...++ . ....++..|.++..++.+
T Consensus 60 ~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~~~~~ 135 (378)
T PRK07682 60 LELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQALDVAMRAI-INPGDEVLIVEPSFV-S-YAPLVTLAGGVPVPVATT 135 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEeecC
Confidence 468888888874 33432 4999999999999999887 478998863 33333 1 223344568888888875
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCccCc---ccC--
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGED---QLA-- 269 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~---pld-- 269 (311)
.+ +..++.+.|++.+.++ ++++.+ +++-||.++|.+ +|.+ |+++++++++|.++.- ... ...
T Consensus 136 ~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~ 209 (378)
T PRK07682 136 LENEFKVQPAQIEAAITAK-----TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE-LTYDEAYTSFA 209 (378)
T ss_pred CccCCCCCHHHHHhhcCcc-----cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh-cccCCCCCChh
Confidence 32 3468899999888754 344433 344699999855 4544 5889999999999774 211 111
Q ss_pred -CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 270 -LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 270 -l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+.. .+-.+++.|+-| .||. .| +|+++.++++++
T Consensus 210 ~~~~~~~~~i~~~S~SK-~~~~-~GlR~G~~~~~~~~i~ 246 (378)
T PRK07682 210 SIKGMRERTILISGFSK-GFAM-TGWRLGFIAAPVYFSE 246 (378)
T ss_pred hcccccCCEEEEecCcc-cccC-hhhhhhhhhcCHHHHH
Confidence 111 134688999999 8884 47 899998765543
No 181
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.00 E-value=4.4e-09 Score=100.72 Aligned_cols=160 Identities=14% Similarity=0.126 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..+.|+.+|+++|+++++ |++|+|+++++++++..+ +|+.|+.. ..+. .....++..|+++..++.+. +..
T Consensus 57 ~~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~ 128 (337)
T PRK03967 57 SDPLREAIAEFYGLDAEN--IAVGNGSDELISYLVKLF---EGKHIVITPPTFG--MYSFYAKLNGIPVIDVPLKE-DFT 128 (337)
T ss_pred HHHHHHHHHHHhCcCcce--EEEcCCHHHHHHHHHHHh---CCCeEEEeCCChH--HHHHHHHHcCCeEEEeecCC-CCC
Confidence 357999999999998765 999999999999998876 58887632 2322 23334566799999999864 456
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cCcccCC-CCCCCcEEEEcc
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GEDQLAL-ALHRPDLVLCTL 282 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~~pldl-~~l~~Dfl~~S~ 282 (311)
++.+.+++.+. + ++++.++ ++-||.++|.+++.++-++++++++|.+..-. +...+.+ ....-=+++.|+
T Consensus 129 ~d~~~l~~~~~-~-----~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~ 202 (337)
T PRK03967 129 IDGERIAEKAK-N-----ASAVFICSPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTF 202 (337)
T ss_pred cCHHHHHHhcc-C-----CCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHHHhhCCCEEEEecc
Confidence 88888877653 2 2444443 33699999999997753579999999987520 2111111 111123677899
Q ss_pred ccCcCCCCCc--eEEEEEeCCCC
Q 021539 283 DNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 283 HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
=| .||.| | +|+++..++..
T Consensus 203 SK-~~~l~-GlRiG~iv~~~~~i 223 (337)
T PRK03967 203 SK-AFGLA-GIRAGYAIANEEII 223 (337)
T ss_pred hH-hhcch-hhhheeeecCHHHH
Confidence 99 88844 5 89999876543
No 182
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.00 E-value=1e-08 Score=99.25 Aligned_cols=157 Identities=16% Similarity=0.195 Sum_probs=110.3
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
+.|+.+|+++|+++++ |++|+|+++++++++.++ +++||.|+.. ..+. .....++..|+++..+|.+. +..++
T Consensus 75 ~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~~~ 148 (371)
T PRK05166 75 ALREAIAARTGVPADR--IILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFP--LHEDYPTMMGARVERVTVTP-DLGFD 148 (371)
T ss_pred HHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCeEEEeecCC-CCCCC
Confidence 6899999999997654 999999999999999887 5789988643 2222 12344566799999999874 45789
Q ss_pred HHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HH--HCCcEEEecccccCc--cCcc---cC-CCCC-CCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AH--RNAWHVLLDATGLVF--GEDQ---LA-LALH-RPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~--G~~p---ld-l~~l-~~D 276 (311)
.+++++.++++ +++|.++. +-||.++|.+++.+ ++ +.++++++|.+-.-. +... +. +... .--
T Consensus 149 ~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 149 LDALCAAVARA-----PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred HHHHHHhhhcC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 99999888764 35666543 25999999988754 33 358899999986520 1110 11 1111 123
Q ss_pred EEEEccccCcCCCCCc--eEEEEEe
Q 021539 277 LVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 277 fl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
+++.|+=| .||.| | +|++++.
T Consensus 224 i~i~SfSK-~~~l~-GlRiG~~i~~ 246 (371)
T PRK05166 224 IVLRTFSK-AYGLA-GLRVGYGLVS 246 (371)
T ss_pred EEEeechH-hhhcc-hhheeeeecC
Confidence 78899999 88744 6 7988764
No 183
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.00 E-value=1.2e-08 Score=103.61 Aligned_cols=160 Identities=13% Similarity=0.123 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..+.|+.||+++ ++++++ |++|+|+++++++++.++ ..+||.|+. ...+.. ....++..|.++..++.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~--I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~~--y~~~~~~~g~~~v~~~~ 261 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDD--IYTGNGVSELINLSMSAL-LDDGDEVLIPSPDYPL--WTACVNLAGGTAVHYRC 261 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhH--EEEeCcHHHHHHHHHHHh-CCCCCEEEEcCCCCcC--HHHHHHHCCCEEEEeec
Confidence 457999999998 677665 999999999999999887 578999863 333331 22334556899888887
Q ss_pred CCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcH---HHHHH-HHHCCcEEEecccccCc---cCcccCC
Q 021539 201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF---GEDQLAL 270 (311)
Q Consensus 201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl 270 (311)
+.. +..+|.++|++.++++ ++++.+ +++=||.++|. ++|.+ |+++++++++|-+-.-. |.....+
T Consensus 262 ~~~~~~~~d~~~l~~~~~~~-----~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~ 336 (517)
T PRK13355 262 DEQSEWYPDIDDIRSKITSR-----TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI 336 (517)
T ss_pred CcccCCCCCHHHHHHhcCcC-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccH
Confidence 642 3467899999888765 344433 34469999994 45543 68899999999985410 2222233
Q ss_pred CCCCCcE--E-EEccccCcCCCCCc--eEEEEEe
Q 021539 271 ALHRPDL--V-LCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 271 ~~l~~Df--l-~~S~HK~l~G~P~G--iG~L~vr 299 (311)
..+..|. + +.|+-| .|| ..| +|.+++.
T Consensus 337 ~~~~~~~~vi~~~S~SK-~~~-~~G~RiG~~i~~ 368 (517)
T PRK13355 337 ASLAPDLFCVTFSGLSK-SHM-IAGYRIGWMILS 368 (517)
T ss_pred HHhCCCCeEEEEecchh-hcc-CcccceEEEEee
Confidence 3333443 2 357789 877 336 8999864
No 184
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.98 E-value=5.2e-09 Score=104.16 Aligned_cols=169 Identities=12% Similarity=0.061 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC--
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-- 203 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-- 203 (311)
..+.+|.+.+|+++|++. ....|.|+|.|+..++.+. .++||.|+..-.-|-+.+..+. -.|++.++++...+
T Consensus 66 G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~ali-l~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNALI-LSGAIPVYIPPEDNEY 140 (417)
T ss_dssp THHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHHH-HHTEEEEEEEEEE-TT
T ss_pred cHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHHH-HcCCeEEEecCCcccc
Confidence 345689999999999963 3555678888888887766 4789999866654433333322 23888888764321
Q ss_pred --CcccCH-----HHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC-----
Q 021539 204 --DLRIKG-----SQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA----- 269 (311)
Q Consensus 204 --~g~id~-----~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld----- 269 (311)
-+.|+. +.+++++++.+.....++|.++.- --|+..++++|.+ ||++|++++||.||.. |..+.
T Consensus 141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F~~lp~~ 218 (417)
T PF01276_consen 141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGA--HFGFHPLPRS 218 (417)
T ss_dssp S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-T--TGGCSGGGTT
T ss_pred CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccc--cccCCCCccc
Confidence 124566 889999986542211234555544 4899999999965 7999999999999984 43333
Q ss_pred CCCCCCc-------EEEEccccCcCCCCCceEEEEEeCCC
Q 021539 270 LALHRPD-------LVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 270 l~~l~~D-------fl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
--.+++| +++-|.|| .+++-+....|.++.+.
T Consensus 219 a~~~gad~~~~~~~~vvqS~HK-tL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHK-TLPALTQTSMLHVKGDR 257 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHH-HSSS-TT-EEEEEETCC
T ss_pred hhhccCccccccceeeeechhh-cccccccceEEEecCCC
Confidence 3347899 99999999 77778899999999986
No 185
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=98.97 E-value=5.6e-09 Score=100.10 Aligned_cols=163 Identities=14% Similarity=0.050 Sum_probs=114.0
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
.+.|+.+|+++|.+++ .+|++|+|+++++.+++..+ ..+||.|+...= .-......++..|++++.+|.+. ++.++
T Consensus 66 ~~lr~~ia~~~~~~~~-~~I~~t~G~~~~i~~~~~~~-~~~gd~vlv~~P-~y~~~~~~~~~~g~~~~~i~~~~-~~~~d 141 (356)
T PRK04870 66 AALKAALRAAMGVPAG-ADVLLGNGSDELIQLLALAC-AKPGATVLAPEP-GFVMYRMSAKLAGLEFVGVPLTA-DFTLD 141 (356)
T ss_pred HHHHHHHHHHhCcCCC-CcEEEcCCHHHHHHHHHHHh-cCCCCEEEECCC-CHHHHHHHHHHcCCEEEEecCCC-CCCCC
Confidence 5799999999998753 25999999999999998877 368898864321 11123445667799999999874 56789
Q ss_pred HHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH-HHCCcEEEecccccCccCcc-c-CCCCCCCcEEEEccc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQ-L-ALALHRPDLVLCTLD 283 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~p-l-dl~~l~~Dfl~~S~H 283 (311)
.++|++.+.++ +++++.++ ++-||..+|.+++.++ +..+.++++|.+..-..... . .+...+--+++.|+.
T Consensus 142 ~~~l~~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~S 217 (356)
T PRK04870 142 LPAMLAAIAEH----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVS 217 (356)
T ss_pred HHHHHHHhhcC----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecch
Confidence 99999988642 14565544 3369999999998664 44488899998764212111 1 122333358899999
Q ss_pred cCcCCCCCc--eEEEEEeCCC
Q 021539 284 NNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 284 K~l~G~P~G--iG~L~vr~~~ 302 (311)
| + | ..| +|+++..++.
T Consensus 218 K-~-~-~~GlRiG~~i~~~~~ 235 (356)
T PRK04870 218 K-L-G-LAGLRLGYLAGHPAW 235 (356)
T ss_pred h-h-h-hHHHhhhhhhCCHHH
Confidence 9 4 5 347 9999876644
No 186
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.96 E-value=1.6e-08 Score=98.08 Aligned_cols=157 Identities=17% Similarity=0.114 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cC--cChHHHHHHHHhCCcEEEEEeCCC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-IS--EESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~e--h~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
...++.++.+|+++|+++++ +++|+|+++|+..++.++. .+||.|+.. .+ .|.. +...++..|.++.. .+
T Consensus 54 ~~~~~Le~~lA~~~g~~~e~--ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s-~~~~~~l~ga~~~~--~~- 126 (346)
T TIGR03576 54 IFEEKVQELGREHLGGPEEK--ILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPS-IPRSCKLAGAEYFE--SD- 126 (346)
T ss_pred HHHHHHHHHHHHHcCCCcce--EEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchh-HHHHHHHcCCEEec--cC-
Confidence 45578999999999997665 9999999999999998884 689998742 22 2222 22334445776522 21
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch---hcHHHHHH-HHHCCcEEEecccccCccCccc----CCCCC
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR---YSMHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALH 273 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i---~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l 273 (311)
+.++++. . ++ +++|.++.. .+|.+ .|+++|.+ ++++|+++++|-+++. |.... .....
T Consensus 127 -----~l~~l~~-~-~~-----~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~-~~~~~~~~~~~~~~ 193 (346)
T TIGR03576 127 -----ELSELKK-I-DG-----TSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA-RVRRLYGQPPALDL 193 (346)
T ss_pred -----CHHHHhh-C-cC-----ceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc-cccccCCCCCHHHc
Confidence 2333322 1 11 456666544 47877 67888755 6889999999999997 64221 12234
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
++|+++.|++|++-| +. .|+++.++++++
T Consensus 194 ~~divv~s~SKalaG-~r-~G~v~~~~~li~ 222 (346)
T TIGR03576 194 GADLVVTSTDKLMDG-PR-GGLLAGRKELVD 222 (346)
T ss_pred CCcEEEeccchhccc-cc-eEEEEeCHHHHH
Confidence 679999999994336 75 688888776543
No 187
>PRK09082 methionine aminotransferase; Validated
Probab=98.96 E-value=1.9e-08 Score=97.89 Aligned_cols=164 Identities=11% Similarity=0.058 Sum_probs=109.8
Q ss_pred HHHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 129 IQARNRALKHCGLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 129 e~aR~~IA~~Lga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
++..+.+.+++|.+.+. .+|++|+|+|+|+.+++.++ ..+||.|+.. ..+. . ....++..|.++..+|.+..+..
T Consensus 74 ~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~p~y~-~-~~~~~~~~g~~~~~~~~~~~~~~ 150 (386)
T PRK09082 74 EAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFDPSYD-S-YAPAIELAGGRAVRVALQPPDFR 150 (386)
T ss_pred HHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEEecCccccc
Confidence 45555555667775432 25999999999999999887 4689988633 2332 1 22334456999999998644567
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCC---C-C
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALA---L-H 273 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~---~-l 273 (311)
++.+++++.++++ +++|.++ ++-||..++.+ +|.+ |+++++++++|.+..-. +.....+. . .
T Consensus 151 ~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~ 225 (386)
T PRK09082 151 VDWQRFAAAISPR-----TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELR 225 (386)
T ss_pred CCHHHHHHhcCcc-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCcc
Confidence 8999999888764 4565554 33699886654 4443 68999999999987420 11112221 1 2
Q ss_pred CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 274 RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+-.+++.|+-| .||.| | +|+++..+++
T Consensus 226 ~~~i~~~S~SK-~~~~~-G~RiG~iv~~~~l 254 (386)
T PRK09082 226 ERAFVVSSFGK-TYHVT-GWKVGYCVAPAAL 254 (386)
T ss_pred CcEEEEeechh-hccch-hhhhhhhhCCHHH
Confidence 34688899999 88744 7 7988876544
No 188
>PRK06207 aspartate aminotransferase; Provisional
Probab=98.95 E-value=2e-08 Score=98.69 Aligned_cols=163 Identities=15% Similarity=0.142 Sum_probs=107.4
Q ss_pred HHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC----C
Q 021539 130 QARNRALKHCGLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW----L 203 (311)
Q Consensus 130 ~aR~~IA~~Lga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~----~ 203 (311)
...+.+++++|.+.+. .+|++|+|+++++.+++..+ ..+||.|+. ...+.. ....++..|.++..+|++. .
T Consensus 86 aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~~~~~~~~~ 162 (405)
T PRK06207 86 LLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA--NRKLVEFFEGEMVPVQLDYLSADK 162 (405)
T ss_pred HHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEEeccccCccc
Confidence 3334444445853222 35999999999999999887 478999863 233321 2344566799998888752 1
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCCCCC
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALALHR 274 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~l~ 274 (311)
+..++.++|+++++++ +++|.+ +++-||.++|.++ |.+ |+++|+++++|-+-+-. |.....+..+.
T Consensus 163 ~~~~d~~~l~~~~~~~-----~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 237 (405)
T PRK06207 163 RAGLDLDQLEEAFKAG-----VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP 237 (405)
T ss_pred CCCcCHHHHHHhhhhc-----CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCC
Confidence 3458899999888764 344433 4446999999665 433 58899999999986531 21112222222
Q ss_pred Cc----EEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 275 PD----LVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 275 ~D----fl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.| +++.|+-| .||.| | +|.++..+++
T Consensus 238 ~~~~~vi~i~SfSK-~~~lp-GlRiG~ii~~~~l 269 (405)
T PRK06207 238 IDPENVITIMGPSK-TESLS-GYRLGVAFGSPAI 269 (405)
T ss_pred CCcCcEEEEecchh-hccCc-ccceEEEEcCHHH
Confidence 22 78899999 88844 7 9998876544
No 189
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=98.95 E-value=3.9e-10 Score=115.26 Aligned_cols=170 Identities=30% Similarity=0.466 Sum_probs=136.6
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcCh---HHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 131 ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEES---DYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 131 aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~---~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.+.++-.+|+.+.++|..+||.+-..+..+.++++++.-...+++..+|+. +++++.|+.+|.++.-.-..|++..+
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~l 260 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLYL 260 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHHH
Confidence 677889999999999999999999999999999999765445678888883 34566677789998888888887777
Q ss_pred CHHHHHhhhhccCCCC---CceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccC---CCCCCCcEEE
Q 021539 208 KGSQLSQNFRRKCKYT---PKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLA---LALHRPDLVL 279 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~---~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld---l~~l~~Dfl~ 279 (311)
--+.|++.+..++... ...|+.++.. +||.+.++.|...+.+++|++++|+-|. |--.+| ++...|||..
T Consensus 261 ~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~l--G~kdmd~yglS~f~Pdfqg 338 (728)
T KOG2142|consen 261 LSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALAL--GPKDMDSYGLSLFQPDFQG 338 (728)
T ss_pred HHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhcc--CcchHhhhhhhccCcccee
Confidence 7778888887543221 2467888877 6999999999999999999999999877 333332 3456799999
Q ss_pred EccccCcCCC--CCceEEEEEeCCCC
Q 021539 280 CTLDNNTHAQ--PLKITCLLVRRKSF 303 (311)
Q Consensus 280 ~S~HK~l~G~--P~GiG~L~vr~~~~ 303 (311)
.++++ .+|. |.|.|||.|++-.+
T Consensus 339 ~sf~f-v~g~d~psgfGcl~VkKs~i 363 (728)
T KOG2142|consen 339 PSFYF-VFGRDDPSGFGCLEVKKSAI 363 (728)
T ss_pred eeEEE-EeccCCCCceeeeeeehhhh
Confidence 99999 8876 68999999998764
No 190
>PLN02822 serine palmitoyltransferase
Probab=98.94 E-value=2.3e-08 Score=101.06 Aligned_cols=163 Identities=12% Similarity=0.125 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
....+.++++|++++.. + .|+|++|++ ++..++.++. ++||.|+.....|.... ...+-.+.++.+++.+.
T Consensus 154 ~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a~~sai~a~~-~~gd~Ii~d~~~H~s~~-~~~~ls~~~~~~~~~nd--- 224 (481)
T PLN02822 154 DVHLDCETKIAKFLGTP-D--SILYSYGLS-TIFSVIPAFC-KKGDIIVADEGVHWGIQ-NGLYLSRSTIVYFKHND--- 224 (481)
T ss_pred HHHHHHHHHHHHHhCCC-C--EEEECCHHH-HHHHHHHHhC-CCCCEEEEeCCccHHHH-HHHHHcCCeEEEECCCC---
Confidence 34569999999999974 3 499998888 5666777773 67888875444442222 12223467888887652
Q ss_pred ccCHHHHHhhhhc---cC--CCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------c
Q 021539 206 RIKGSQLSQNFRR---KC--KYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------L 268 (311)
Q Consensus 206 ~id~~~L~~~l~~---~~--~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------l 268 (311)
.++++..++. .. ++..+++|.+... .+|.+.|+++|.+ ++++|+++++|-+|+. |... .
T Consensus 225 ---~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~-gvlG~~G~G~~e~~ 300 (481)
T PLN02822 225 ---MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSF-GVLGKSGRGLSEHF 300 (481)
T ss_pred ---HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCChHHHc
Confidence 3344443331 10 0111356666444 4899999999976 6999999999999996 6421 3
Q ss_pred CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 269 dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
++....+|+++.|+.| -+| +.| |+++.+++..+
T Consensus 301 ~v~~~~~dii~~s~sK-alg-~~G-G~i~g~~~ii~ 333 (481)
T PLN02822 301 GVPIEKIDIITAAMGH-ALA-TEG-GFCTGSARVVD 333 (481)
T ss_pred CCCCCCCeEEEecchh-hhh-hCC-eEEEcCHHHHH
Confidence 3433468999999999 778 667 88887766543
No 191
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.93 E-value=6.8e-08 Score=97.15 Aligned_cols=178 Identities=11% Similarity=0.063 Sum_probs=108.4
Q ss_pred HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHH
Q 021539 109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFA 188 (311)
Q Consensus 109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la 188 (311)
+..+...--+|-|+..-. +-.+.+++++|.. . +++|+|+|.|++++ ..+..++||.| +...|... .+.-.
T Consensus 64 ~a~~~vGDd~Yagd~s~~---~LE~~vAe~lG~e--~--aV~v~sGTaAl~ll-~~l~v~pGd~V-p~n~~f~T-t~ahI 133 (460)
T PRK13237 64 WAGMMIGDEAYAGSRNFY---HLEETVQEYYGFK--H--VVPTHQGRGAENLL-SRIAIKPGQYV-PGNMYFTT-TRYHQ 133 (460)
T ss_pred HHHHhhcchhhcCCCcHH---HHHHHHHHHHCCC--e--EEEeCCHHHHHHHH-HHhCCCCcCEE-CCccchHh-hHHHH
Confidence 444444445566665544 4455689999984 3 99999999999986 44456789875 33333311 11111
Q ss_pred HhCCcEEEEEe---------CCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccc-cchhc---HHHHHH-HHHCCc
Q 021539 189 AQKESKVIAAP---------ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVN-GTRYS---MHWISE-AHRNAW 252 (311)
Q Consensus 189 ~~~G~~V~~vp---------~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~t-G~i~P---i~~I~~-a~~~g~ 252 (311)
...|....-+. .+..++.+|+++|++.++++.. ..++|+++ +.+.. |...| +++|.+ |+++|+
T Consensus 134 ~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~-~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl 212 (460)
T PRK13237 134 ELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI 212 (460)
T ss_pred HhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC
Confidence 33466332221 1123678999999999986421 22445543 33344 66654 566755 699999
Q ss_pred EEEecccccCccCc-----------ccCCC------CCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 253 HVLLDATGLVFGED-----------QLALA------LHRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 253 ~vlvDAaQsv~G~~-----------pldl~------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
.+|.|||+++ |.- .-++. ....|.++||+|| -++.|. =|++..++
T Consensus 213 ~Vi~DaAra~-gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K-~~~~~~-GG~i~t~D 274 (460)
T PRK13237 213 KVFFDATRCV-ENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKK-DCLVNI-GGFLAMND 274 (460)
T ss_pred EEEEECcchh-cChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCC-CCCCCC-ceEEEECC
Confidence 9999999999 822 22221 1248999999999 554353 14444443
No 192
>PLN00175 aminotransferase family protein; Provisional
Probab=98.91 E-value=3.2e-08 Score=97.72 Aligned_cols=163 Identities=12% Similarity=0.086 Sum_probs=109.7
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
+.|+.+++++ | ++++ .+|++|+|+|+|+.+++.++ ..+||.|+...-.... ....++..|.+++.+|.+.+
T Consensus 95 ~Lr~aia~~~~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~-~~~~~~~~g~~~~~v~~~~~ 171 (413)
T PLN00175 95 ELNSAIAERFKKDTGLVVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDS-YEATLSMAGAKIKTVTLRPP 171 (413)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHh-CCCCCEEEEeCCCchh-HHHHHHHcCCEEEEEECCcc
Confidence 4666666665 4 3443 24999999999999988877 5789998643222222 22334557999999998643
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc--cCcccCCCC---
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF--GEDQLALAL--- 272 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~--- 272 (311)
+..++.+.|++.+.++ ++++.++ ++-||.+++.++ |.+ |+++++++++|-+..-. +.....+..
T Consensus 172 ~~~~~~~~l~~~~~~~-----~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~ 246 (413)
T PLN00175 172 DFAVPEDELKAAFTSK-----TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG 246 (413)
T ss_pred cCCCCHHHHHHhcCcC-----ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC
Confidence 4578899999888764 4566553 335999998665 433 58899999999986531 111122211
Q ss_pred -CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 -HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 -l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.+..+++.|+=| .||.| | +|+++..+++
T Consensus 247 ~~~~vi~i~SfSK-~~~~~-G~RiG~~v~~~~l 277 (413)
T PLN00175 247 MYERTVTMNSLGK-TFSLT-GWKIGWAIAPPHL 277 (413)
T ss_pred CcCcEEEEecchh-hccCc-chheeeeEeCHHH
Confidence 234578889999 88745 5 7998887654
No 193
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.91 E-value=1.7e-08 Score=98.01 Aligned_cols=174 Identities=14% Similarity=0.107 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEE-ccCcChH--HHHHHHHh---------
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLT-IISEESD--YIKGFAAQ--------- 190 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils-~~eh~~~--~~~~la~~--------- 190 (311)
......+..+.++++++.+.+ .|+||.|+|+|+..++..+ .+.+++.|+. ...+|.. ....+...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 154 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGP 154 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 345567899999999997544 4999999999999877754 2345677764 3344421 11111111
Q ss_pred CCcEEEEEeCCCC-----CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecc
Q 021539 191 KESKVIAAPETWL-----DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDA 258 (311)
Q Consensus 191 ~G~~V~~vp~~~~-----~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDA 258 (311)
.+..+..+|.+.. +...+.++|++.+++.. ..+.+|.+..+ .+|.+.| +++|.+ |+++|+++++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De 232 (413)
T cd00610 155 LLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP--EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADE 232 (413)
T ss_pred CCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC--CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0224556665421 12236778888887521 12456665444 4699988 888865 699999999999
Q ss_pred cccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 259 TGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 259 aQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+|+..|... .+.....+|++++| | .+|++..+|+++.++++.+
T Consensus 233 v~~g~g~~g~~~~~~~~~~~~d~~t~s--K-~l~~g~~~g~~~~~~~~~~ 279 (413)
T cd00610 233 VQTGFGRTGKMFAFEHFGVEPDIVTLG--K-GLGGGLPLGAVLGREEIMD 279 (413)
T ss_pred cccCCCcCcchhhHhhcCCCCCeEEEc--c-cccCccccEEEEEcHHHHH
Confidence 987423221 23333468998887 9 5553445999998875544
No 194
>PRK10534 L-threonine aldolase; Provisional
Probab=98.90 E-value=1e-08 Score=97.13 Aligned_cols=165 Identities=16% Similarity=0.111 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhC-CcEEEEEeCCCCCc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQK-ESKVIAAPETWLDL 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~-G~~V~~vp~~~~~g 205 (311)
..+.|+.+|+++|+++ +++|+|+++++.+....+ ..+|++|+.. ..|.......-+... ++++..++.+. +.
T Consensus 36 ~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 109 (333)
T PRK10534 36 VNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA-DG 109 (333)
T ss_pred HHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-CC
Confidence 4589999999999853 568888888877666554 4688887633 233211100001112 35666777664 67
Q ss_pred ccCHHHHHhhhhccCCC-CCceEEEEecccccchhcHHHHH----HHHHCCcEEEecccccCccCc---ccCCCC--CCC
Q 021539 206 RIKGSQLSQNFRRKCKY-TPKGLFSYPVVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVFGED---QLALAL--HRP 275 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~-~~t~LVs~~~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~G~~---pldl~~--l~~ 275 (311)
.+|.++|+++++++..+ ..+++|.+....||++.|.++|. .++++++.+++|.++.. +.. ...... ...
T Consensus 110 ~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~-~~~~~~~~~~~~~~~~~ 188 (333)
T PRK10534 110 TLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWEFTRERNLALHVDGARIF-NAVVAYGCELKEITQYC 188 (333)
T ss_pred CCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHH-HHHHHcCCCHHHHHhcC
Confidence 78999999888652100 02466666544689999998874 25788999999998765 421 111110 135
Q ss_pred cEEEEccccCcCCCCCceEE-EEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLKITC-LLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~-L~vr~~~ 302 (311)
|.+++|++| .||.| +|+ ++..+++
T Consensus 189 ~~~~~s~SK-~~~~~--~G~~~~~~~~~ 213 (333)
T PRK10534 189 DSFTICLSK-GLGTP--VGSLLVGNRDY 213 (333)
T ss_pred CEEEEEeEc-CCCCc--ccceEEcCHHH
Confidence 777889999 88855 674 5444443
No 195
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.90 E-value=7.4e-08 Score=96.66 Aligned_cols=179 Identities=11% Similarity=0.059 Sum_probs=113.7
Q ss_pred cchh-HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHH
Q 021539 105 EPSR-LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDY 183 (311)
Q Consensus 105 ~~~~-l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~ 183 (311)
++++ +..+...-.+|-|+..-. +-.+.+++++|.+ . +++|+|+|.|+|++. .+..++||.|. ...|...
T Consensus 52 Ms~~q~a~~~~GDe~yag~~s~~---~lE~~va~~~G~~--~--av~v~sGT~Al~ll~-~l~l~pGDeVp-sn~~f~T- 121 (450)
T TIGR02618 52 MSDKQWAGLMMGDEAYAGSRNFY---HLERTVRELYGFK--Y--VVPTHQGRGAENLLS-QIAIKPGDYVP-GNMYFTT- 121 (450)
T ss_pred HHHHHHHHhhhcchhhcCCCcHH---HHHHHHHHHHCCC--e--EEEcCCHHHHHHHHH-HhCCCCcCEEC-CceeHHH-
Confidence 3344 555555545677666544 4556689999984 3 999999999999865 55568999773 2333211
Q ss_pred HHHHHHhCCcEEEEEeCC---------CCCcccCHHHHHhhhhccCCCCCceEEEE--eccc-ccchhcH---HHHHH-H
Q 021539 184 IKGFAAQKESKVIAAPET---------WLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVV-NGTRYSM---HWISE-A 247 (311)
Q Consensus 184 ~~~la~~~G~~V~~vp~~---------~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~-tG~i~Pi---~~I~~-a 247 (311)
...-....|....-++.+ ..+|.+|+++|++.++++.. ..+.++++ +++. .|...|+ ++|.+ |
T Consensus 122 t~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA 200 (450)
T TIGR02618 122 TRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIPYICLAVTVNLAGGQPVSMANMREVRELC 200 (450)
T ss_pred HHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccCceEEEEecccCCCeeCCHHHHHHHHHHH
Confidence 111123346644444332 22578999999999986421 12345543 3333 4788664 56655 5
Q ss_pred HHCCcEEEecccccCccCccc-----------CCC----C--CCCcEEEEccccCcCCCCCceEEEEE
Q 021539 248 HRNAWHVLLDATGLVFGEDQL-----------ALA----L--HRPDLVLCTLDNNTHAQPLKITCLLV 298 (311)
Q Consensus 248 ~~~g~~vlvDAaQsv~G~~pl-----------dl~----~--l~~Dfl~~S~HK~l~G~P~GiG~L~v 298 (311)
+++|+.+|.||++++ |.--+ ++. + ..+|.+++|+|| -++.|. |.+++
T Consensus 201 ~~~Gl~vi~DaAR~~-gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~K-d~~~~~--GG~l~ 264 (450)
T TIGR02618 201 EAHGIKVFYDATRCV-ENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKK-DCLVNI--GGFLC 264 (450)
T ss_pred HHcCCEEEEEccchh-hChhhhhcccccccCCCHHHHHHHHhccCcEEEEeecc-CCCCCC--ceEEE
Confidence 899999999999999 75221 220 0 248999999999 776674 55555
No 196
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.90 E-value=3.3e-08 Score=96.64 Aligned_cols=161 Identities=12% Similarity=0.083 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
....++.++++|+++|.+ + .++|++| ++|+..++..+ .+.+++.+++..-||...+.. .+..++++..++.+
T Consensus 90 ~~~~~~l~~~la~~~g~~-~--~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~-~~~~~~~~~~~~~~-- 162 (407)
T PRK09064 90 NHYHVELERELADLHGKE-A--ALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEG-IRRSRCEKHIFRHN-- 162 (407)
T ss_pred HHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH-HHHcCCcEEEECCC--
Confidence 345678999999999952 2 3555555 55655444432 223566666554445333222 23346666555432
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cc--------cCCC
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQ--------LALA 271 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~p--------ldl~ 271 (311)
|.++|+++++... ...+++|.+... .+|.+.|+++|.+ |+++|+++++|.+|++ |. .+ .++.
T Consensus 163 ----d~~~le~~l~~~~-~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~-G~~g~~g~g~~~~~~~~ 236 (407)
T PRK09064 163 ----DVAHLEELLAAAD-PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAV-GMYGPRGGGIAERDGLM 236 (407)
T ss_pred ----CHHHHHHHHHhcc-CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcc-cccCCCCCChHHhcCCC
Confidence 4677877776311 112567776655 5899999999966 6999999999999986 53 11 1221
Q ss_pred CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.++|+++.|+.| .|| +.| |+++.+++.
T Consensus 237 -~~~div~~t~sK-a~g-~~G-G~~~~~~~~ 263 (407)
T PRK09064 237 -DRIDIIEGTLAK-AFG-VMG-GYIAGSAAL 263 (407)
T ss_pred -CCCeEEEEecch-hhh-ccC-ceEecCHHH
Confidence 257999999999 888 556 777766543
No 197
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.90 E-value=4.3e-08 Score=95.78 Aligned_cols=159 Identities=15% Similarity=0.155 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
..++.++++|+++|.+ . .+|++++++|+..++..+. +.+++.|++...+|...+.. ++..|+++..++.+
T Consensus 91 ~~~~Le~~la~~~g~~--~--~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~-~~~~g~~~~~~~~~---- 161 (402)
T TIGR01821 91 PHVELEAELADLHGKE--S--ALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG-IRHSGAEKFIFRHN---- 161 (402)
T ss_pred HHHHHHHHHHHHhCCC--e--EEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH-HHHcCCeEEEECCC----
Confidence 4568999999999963 2 5555666888777766543 23567776543233222222 33457776655432
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-cc--------CCCCC
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-QL--------ALALH 273 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pl--------dl~~l 273 (311)
|.++++++++.. ....+++|.+... .+|.+.|+++|.+ |+++|+++++|.+|++ |.. +. ++. .
T Consensus 162 --d~~~l~~~l~~~-~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~-G~~g~~g~g~~~~~~~~-~ 236 (402)
T TIGR01821 162 --DVAHLEKLLQSV-DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAV-GLYGPRGGGIAERDGLM-H 236 (402)
T ss_pred --CHHHHHHHHHhc-cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccc-cccCCCCCccchhccCC-C
Confidence 456777777631 1112567776554 5899999999966 6999999999999996 642 21 111 2
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++|++..++-| .|| ..| |+++.+++.
T Consensus 237 ~~div~~t~sK-a~g-~~G-G~i~~~~~~ 262 (402)
T TIGR01821 237 RIDIIEGTLAK-AFG-VVG-GYIAASRKL 262 (402)
T ss_pred CCeEEEEechh-hhc-cCC-ceeecCHHH
Confidence 47999999999 778 335 666555443
No 198
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=98.89 E-value=5.1e-08 Score=95.85 Aligned_cols=163 Identities=10% Similarity=0.133 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..++.++++|+++|.+ + .++|++|.++....+ ..+ +++||+|+.....|...+.. +.-.++++.+++.+ +.
T Consensus 44 ~~~~LE~~lA~~~g~e-~--al~~~sG~~a~~~~i-~~l-~~~GD~Vl~~~~~h~s~~~~-~~l~~~~~~~~~~~--d~- 114 (392)
T PLN03227 44 AHLELEQCMAEFLGTE-S--AILYSDGASTTSSTV-AAF-AKRGDLLVVDRGVNEALLVG-VSLSRANVRWFRHN--DM- 114 (392)
T ss_pred HHHHHHHHHHHHhCCC-c--EEEecCcHHHHHHHH-HHh-CCCCCEEEEeccccHHHHHH-HHHcCCeEEEeCCC--CH-
Confidence 4578999999999985 3 499999988887544 344 57999987544333222322 22335677666653 11
Q ss_pred cCHHHHHhhhhccC------CCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------c
Q 021539 207 IKGSQLSQNFRRKC------KYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------L 268 (311)
Q Consensus 207 id~~~L~~~l~~~~------~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------l 268 (311)
-+.+.+.+.++.+. ...++++|.+... .+|.+.|+++|.+ |+++|+++++|-+|++ |..- +
T Consensus 115 ~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~-g~~g~~G~g~~~~~ 193 (392)
T PLN03227 115 KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSF-GTLGKSGRGSLEHA 193 (392)
T ss_pred HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccc-cccCCCCCcHHHHc
Confidence 12333333333110 0013567776544 5899999999966 6999999999999996 5321 1
Q ss_pred CCC-CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 269 ALA-LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 269 dl~-~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++. ..++|.+++|..| .+| |. .|++..+++.
T Consensus 194 g~~p~~~~Div~~slsk-~~g-~~-gg~v~~~~~~ 225 (392)
T PLN03227 194 GLKPMVHAEIVTFSLEN-AFG-SV-GGMTVGSEEV 225 (392)
T ss_pred CCCCCCCceEEEeechh-hhh-cc-CcEEecCHHH
Confidence 121 2367999999999 677 64 3455555543
No 199
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.89 E-value=9.5e-09 Score=98.94 Aligned_cols=161 Identities=12% Similarity=0.056 Sum_probs=111.4
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
.+.|+.+|+++|+++++ |++|+|++|++.++.+.+ ..+| +.|+.. ..+. .....++..|+++..+|.+. +..
T Consensus 60 ~~l~~~~a~~~g~~~~~--I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~--~y~~~~~~~G~~~~~v~~~~-~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG--MYSVSAETIGVEIRTVPTLD-NWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHH--HHHHHHHHcCCEEEEeecCC-CCC
Confidence 37899999999998765 999999999999999987 4565 777533 2322 12344566799999999864 567
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH-H--HCCcEEEecccccCc-cC-cccCC-CCCCCcEE
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA-H--RNAWHVLLDATGLVF-GE-DQLAL-ALHRPDLV 278 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a-~--~~g~~vlvDAaQsv~-G~-~pldl-~~l~~Dfl 278 (311)
+|.+++++.+. + +++|.++ .+-||++++.+++.++ + +.++++++|.+..-. +. ..+++ ....-=++
T Consensus 134 ~d~~~l~~~~~-~-----~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv 207 (351)
T PRK01688 134 LDLPAIADNLD-G-----VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVI 207 (351)
T ss_pred CCHHHHHHhcc-C-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEE
Confidence 88999988773 3 3555543 3369999999887553 2 236889999986420 11 01111 11222367
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+-|+.| .|| ..| +|+++.+++..
T Consensus 208 ~rSfSK-~~g-laGlRiGy~i~~~~~i 232 (351)
T PRK01688 208 LRTLSK-AFA-LAGLRCGFTLANEEVI 232 (351)
T ss_pred EecchH-hhc-CHHHHHhHHhCCHHHH
Confidence 789999 998 567 59999877654
No 200
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.87 E-value=7.9e-08 Score=93.85 Aligned_cols=160 Identities=16% Similarity=0.083 Sum_probs=109.5
Q ss_pred HHHHHHHHHHcC-----CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 129 IQARNRALKHCG-----LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 129 e~aR~~IA~~Lg-----a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
.+.|+.||++++ +++++ |++|+|+|+|+.+++..+. .+|+.|+.. ..+ .. ....++..|+++..++.+.
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y-~~-~~~~~~~~g~~v~~~~~~~ 150 (401)
T TIGR01264 76 LSAREAIASYYHNPDGPIEADD--VVLCSGCSHAIEMCIAALA-NAGQNILVPRPGF-PL-YETLAESMGIEVKLYNLLP 150 (401)
T ss_pred HHHHHHHHHHHhhcCCCCCHHH--EEECcChHHHHHHHHHHhC-CCCCEEEEeCCCC-hh-HHHHHHHcCCEEEEeecCC
Confidence 468999999997 55554 9999999999999998873 678887633 222 12 2344566799998888753
Q ss_pred C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539 203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALAL 272 (311)
Q Consensus 203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~ 272 (311)
. +..++.+.|++.++++ ++++.++ ++-||..++.++ |.+ |+++|+++++|-+-.-. +.....+..
T Consensus 151 ~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (401)
T TIGR01264 151 DKSWEIDLKQLESLIDEK-----TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225 (401)
T ss_pred ccCCCCCHHHHHHHhccC-----ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence 2 3568999998887654 3555543 335999998554 433 58899999999986520 211222222
Q ss_pred CCC---cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 273 HRP---DLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 273 l~~---Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
+.. =+++.|+=| .||.| | +|++++.+
T Consensus 226 ~~~~~~vi~~~SfSK-~~~~~-GlRiG~iv~~~ 256 (401)
T TIGR01264 226 LSSTVPILSCGGLAK-RWLVP-GWRLGWIIIHD 256 (401)
T ss_pred cCCCCcEEEEccCcc-cCCCc-cceEEEEEecC
Confidence 222 267889999 77744 6 89998763
No 201
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.87 E-value=4.5e-08 Score=95.95 Aligned_cols=158 Identities=14% Similarity=0.104 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
..+.++++|+++|.+ + .|+|++| ++|+..++..+. ..+|+.|++. ..|.+. + ..++..|.++..++.+
T Consensus 93 ~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~-~-~~~~~~g~~~~~~~~~---- 162 (410)
T PRK13392 93 HVLLERELADLHGKE-S--ALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASM-I-EGIRRSGAEKQVFRHN---- 162 (410)
T ss_pred HHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHH-H-HHHHHcCCeEEEEeCC----
Confidence 458889999999963 3 4777766 566655555442 2367877643 344432 2 2334568888776543
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-cc--------CCCCC
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-QL--------ALALH 273 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pl--------dl~~l 273 (311)
+.+.+++.++.... ..+++|.+... .+|.+.|+++|.+ |+++|+++++|.+|++ |.. +- ++. .
T Consensus 163 --d~~~l~~~l~~~~~-~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~-~ 237 (410)
T PRK13392 163 --DLADLEEQLASVDP-DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAV-GLYGARGGGIAERDGLM-D 237 (410)
T ss_pred --CHHHHHHHHHhccC-CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-cCcCCCCCchhhhccCC-C
Confidence 23455555543211 12567776544 5999999999966 6999999999999996 542 11 111 2
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
++|+++.|+.| .||.| | |++..+++..
T Consensus 238 ~~div~~tlsK-~~g~~-G-G~~~~~~~~~ 264 (410)
T PRK13392 238 RIDMIQGTLAK-AFGCL-G-GYIAASADLI 264 (410)
T ss_pred CCcEEEEEChH-hhhcc-c-chhhcCHHHH
Confidence 57999999999 88854 5 6666555443
No 202
>PLN02187 rooty/superroot1
Probab=98.87 E-value=6.9e-08 Score=97.03 Aligned_cols=160 Identities=15% Similarity=0.103 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..+.|+.||++++ +++++ |++|+|+++|+.+++.++ ..+||.|+. ...+.. ....++..|.++..++.
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~~--I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~l 184 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPED--IFLTAGCNQGIEIVFESL-ARPNANILLPRPGFPH--YDARAAYSGLEVRKFDL 184 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCccc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEeC
Confidence 3478999999884 56554 999999999999999988 478998863 333331 22335567999998886
Q ss_pred CC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHH---HHH-HHHCCcEEEecccccC--c-cCcccCC
Q 021539 201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLV--F-GEDQLAL 270 (311)
Q Consensus 201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv--~-G~~pldl 270 (311)
.. .+..+|.++|+++++++ ++++.+ +++-||.+++.++ |.+ |+++|+++++|-+-.- . +.....+
T Consensus 185 ~~~~~~~~d~~~l~~~~~~~-----~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~ 259 (462)
T PLN02187 185 LPEKEWEIDLEGIEAIADEN-----TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM 259 (462)
T ss_pred ccccCCccCHHHHHHhcCCC-----cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH
Confidence 32 24568899999888654 334433 3446999999554 433 5889999999998652 0 2111122
Q ss_pred CCCC---CcEEEEccccCcCCCCCc--eEEEEEe
Q 021539 271 ALHR---PDLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 271 ~~l~---~Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
..+. .=+++.|+=| .|+.| | +|.++..
T Consensus 260 ~~~~~~~~vi~l~SfSK-~f~~p-GlRiG~~v~~ 291 (462)
T PLN02187 260 GKFASIVPVLTLAGISK-GWVVP-GWKIGWIALN 291 (462)
T ss_pred HHhccCCcEEEEecchh-hcCCc-cceeEEEEec
Confidence 2221 2366779999 77755 5 8988873
No 203
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.86 E-value=9.3e-08 Score=95.06 Aligned_cols=160 Identities=15% Similarity=0.063 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
+.+.|+.||++++. +++ +|++|+|+|+|+++++..+ ..+||+|+.. ..+.. ....+...|.++..++.
T Consensus 96 ~~~lr~aia~~~~~~~~~~~~~~--~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~~ 170 (430)
T PLN00145 96 LLPARRAIAEYLSRDLPYELSTD--DIYLTAGCAQAIEIIMSVL-AQPGANILLPRPGYPL--YEARAVFSGLEVRHFDL 170 (430)
T ss_pred CHHHHHHHHHHHhhccCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--HHHHHHHcCCEEEEeeC
Confidence 34789999999853 444 5999999999999999988 4789998633 23221 12234446889988875
Q ss_pred CC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCc--cC-cccCC
Q 021539 201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF--GE-DQLAL 270 (311)
Q Consensus 201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~--G~-~pldl 270 (311)
.. .+..+|.++|+++++++ ++++.+ +.+-||.++|.+ +|.+ |+++|+++++|.+-.-. +. ..+.+
T Consensus 171 ~~~~~~~~d~~~l~~~~~~~-----~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~ 245 (430)
T PLN00145 171 LPERGWEVDLEGVEALADEN-----TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM 245 (430)
T ss_pred CcccCCcCCHHHHHHHhCcC-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch
Confidence 32 24568999999888765 344433 333699999954 5544 68899999999985420 11 11222
Q ss_pred CC---CCCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539 271 AL---HRPDLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 271 ~~---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
.. ...=+++.|+=| .|+.| | +|.+++.
T Consensus 246 ~~~~~~~~vi~~~S~SK-~~~~p-G~RlG~iv~~ 277 (430)
T PLN00145 246 GVFGEVAPVLTLGSISK-RWVVP-GWRLGWIATC 277 (430)
T ss_pred hhhcccCcEEEEecccc-ccCCC-CeeEEEEEEe
Confidence 21 223477889999 76645 5 8998873
No 204
>PLN02656 tyrosine transaminase
Probab=98.86 E-value=8.4e-08 Score=94.36 Aligned_cols=160 Identities=16% Similarity=0.038 Sum_probs=106.9
Q ss_pred HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.++++++ ++++ +|++|+|+|+|+++++..+ ..+||.|+ ....+.. ....++..|+++..+|.+
T Consensus 76 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~i~~~ 150 (409)
T PLN02656 76 PQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPRPGFPI--YELCAAFRHLEVRYVDLL 150 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeCCCCCc--HHHHHHHcCCEEEEEeCC
Confidence 368888888874 4444 5999999999999999887 47899886 3334431 122334469999999985
Q ss_pred CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
.. +..++.+.+++.++++ ++++.+. ++-||.+++.+ +|.+ |+++|+++++|.+-.-. +.....+.
T Consensus 151 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 225 (409)
T PLN02656 151 PEKGWEVDLDAVEALADQN-----TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMG 225 (409)
T ss_pred CcCCCCCCHHHHHHHhccC-----ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHH
Confidence 32 3468899998888654 3444443 33699998654 4433 58899999999986520 11112221
Q ss_pred ---CCCCcEEEEccccCcCCCC-CceEEEEEe
Q 021539 272 ---LHRPDLVLCTLDNNTHAQP-LKITCLLVR 299 (311)
Q Consensus 272 ---~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr 299 (311)
....=+++.|+=| .|+.| -.+|+++..
T Consensus 226 ~~~~~~~vi~~~SfSK-~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 226 VFGSIVPVLTLGSLSK-RWIVPGWRLGWFVTT 256 (409)
T ss_pred HhcccCcEEEEcccch-hccCcceeEEEEEEe
Confidence 1122367889999 76645 138999874
No 205
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.86 E-value=6.9e-08 Score=94.66 Aligned_cols=157 Identities=15% Similarity=0.141 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
..++.++++|+++|.+ ..++|++|+ +|+..++..+.. .+|+.|++. .+|.+ .+.. .+..|.++..++.+
T Consensus 91 ~~~~le~~la~~~g~~---~~~~~~SG~-~An~~ai~~l~~~~~g~~I~~~~~~H~s-~~~~-~~~~g~~~~~~~~~--- 161 (406)
T PRK13393 91 YHVLLEAELADLHGKE---AALLFTSGY-VSNWAALSTLGSRLPGCVILSDELNHAS-MIEG-IRHSRAEKRIFRHN--- 161 (406)
T ss_pred HHHHHHHHHHHHhCCC---cEEEeCCcH-HHHHHHHHHhhcCCCCCEEEEccchhHH-HHHH-HHHcCCeEEEeCCC---
Confidence 4568899999999973 236666665 577666665432 256777654 44432 2222 23357777776643
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-ccc--------CCCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQL--------ALAL 272 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pl--------dl~~ 272 (311)
+.+.+++.++... ...+++|++.++ .+|.++|+++|.+ |+++|+++++|.+|++ |. .+. ++.
T Consensus 162 ---d~~~l~~~l~~~~-~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~G~g~~~~~~~~- 235 (406)
T PRK13393 162 ---DPADLERKLSDLD-PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAV-GLYGPRGGGIAEREGLA- 235 (406)
T ss_pred ---CHHHHHHHHHhcc-CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchhhhcCCC-
Confidence 4566666665311 112578877655 5899999999966 6999999999999996 65 221 111
Q ss_pred CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
.++|+++.++=| .||.+ | |++..+++
T Consensus 236 ~~~~i~~~tlsK-a~g~~-G-G~~~~~~~ 261 (406)
T PRK13393 236 DRLTIIEGTLAK-AFGVM-G-GYITGSAA 261 (406)
T ss_pred CCCeEEEEeCch-hhccc-C-ceeeCCHH
Confidence 236888889999 88843 5 66654433
No 206
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.85 E-value=1.1e-07 Score=93.58 Aligned_cols=159 Identities=12% Similarity=0.076 Sum_probs=107.3
Q ss_pred HHHHHHHHHHcC------------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEE
Q 021539 129 IQARNRALKHCG------------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKV 195 (311)
Q Consensus 129 e~aR~~IA~~Lg------------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V 195 (311)
.+.|+.||++++ ++++ +|++|+|+++++.+++..+ ..+||.|+. ...+.. ....++..|+++
T Consensus 78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~g~~~ 152 (412)
T PTZ00433 78 PEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPH--YETVCKAYGIEM 152 (412)
T ss_pred HHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCccc--HHHHHHHcCCEE
Confidence 368899999886 4444 4999999999999999987 468898863 333321 233456679999
Q ss_pred EEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCc
Q 021539 196 IAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GED 266 (311)
Q Consensus 196 ~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~ 266 (311)
..+|.+.. +..++.++|++.++++ +++|.++ ++-||..++.+++ .+ |+++|+++++|-+..-. +..
T Consensus 153 ~~i~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 227 (412)
T PTZ00433 153 RFYNCRPEKDWEADLDEIRRLVDDR-----TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA 227 (412)
T ss_pred EEEecCccccCcCCHHHHHHHhccC-----ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC
Confidence 99987532 3468899998888754 3555553 2359998886554 33 58899999999986520 111
Q ss_pred c-cCCCCC---CCcEEEEccccCcCCCC-CceEEEEE
Q 021539 267 Q-LALALH---RPDLVLCTLDNNTHAQP-LKITCLLV 298 (311)
Q Consensus 267 p-ldl~~l---~~Dfl~~S~HK~l~G~P-~GiG~L~v 298 (311)
+ ..+..+ ..-+++.|+=| .||.| -.+|++++
T Consensus 228 ~~~~~~~~~~~~~~i~~~SfSK-~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 228 TFTSVADFDTTVPRVILGGTAK-NLVVPGWRLGWLLL 263 (412)
T ss_pred CccchhhccCCCceEEEccchh-hcCCCCeeEEEEEE
Confidence 1 111111 12267789999 88645 24898886
No 207
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.83 E-value=3.3e-08 Score=95.63 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH-----HHHHHHHhCCcEEEEEeCCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD-----YIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~-----~~~~la~~~G~~V~~vp~~~ 202 (311)
..++.+++++++|. .. +.|++++|.|+.+.+.+.. ++|..|++..+.|.. ....+ ..+.++..++-
T Consensus 37 ~~~~e~~~ae~~g~--~a--~~Fv~sGT~aN~lal~~~~-~~~~~vi~~~~aHi~~~E~Ga~~~~--~~~~~~~~~~g-- 107 (342)
T COG2008 37 TNALEQRIAELFGK--EA--ALFVPSGTQANQLALAAHC-QPGESVICHETAHIYTDECGAPEFF--GGGQKLPIVPG-- 107 (342)
T ss_pred HHHHHHHHHHHhCC--ce--EEEecCccHHHHHHHHHhc-CCCCeEEEeccccceecccCcHHHH--cCCceeccCCC--
Confidence 45788899999998 33 9999999999999888775 677777655444422 12221 11333333332
Q ss_pred CCcccCHHHHHhhhhccC-CCCCceEEEE-e-cccccchhcHHHHH---H-HHHCCcEEEecccccCccC--cccCCCC-
Q 021539 203 LDLRIKGSQLSQNFRRKC-KYTPKGLFSY-P-VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGE--DQLALAL- 272 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~-~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~--~pldl~~- 272 (311)
++|.+++++++..+++.. -+.++.++++ + +.+.|+++|+++|. + ||++|..+|+|++=.+-.. ..+++..
T Consensus 108 ~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~ 187 (342)
T COG2008 108 ADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTI 187 (342)
T ss_pred CCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHH
Confidence 379999999999887532 2334566654 3 22669999999873 3 5899999999998653111 1133332
Q ss_pred -CCCcEEEEccccCcCCCCCceEEEEE
Q 021539 273 -HRPDLVLCTLDNNTHAQPLKITCLLV 298 (311)
Q Consensus 273 -l~~Dfl~~S~HK~l~G~P~GiG~L~v 298 (311)
..+|.++|++-| -.|.| +|.+++
T Consensus 188 ~~~~D~v~~~~tK-~g~~~--~gAiv~ 211 (342)
T COG2008 188 KSYVDSVSFCLTK-GGGAP--VGAIVF 211 (342)
T ss_pred HhhCCEEEEeccc-CCcce--eeeEEE
Confidence 369999999999 55545 444443
No 208
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.77 E-value=2.2e-07 Score=91.43 Aligned_cols=160 Identities=16% Similarity=0.095 Sum_probs=106.0
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.||+++ +++++ +|++|+|+++++.+++..+. .+||.|+. .-.+.. ....++..|.++..++.+.
T Consensus 78 ~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~--~~~~~~~~g~~~~~~~~~~ 152 (409)
T PLN00143 78 PARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPD--VETYAIFHHLEIRHFDLLP 152 (409)
T ss_pred HHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcC--HHHHHHHcCCEEEEEeccC
Confidence 6888899887 35554 49999999999999999873 68898753 222221 2233455689998888742
Q ss_pred -CCcccCHHHHHhhhhccCCCCCceEE-EEecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcc-cCCCCC
Q 021539 203 -LDLRIKGSQLSQNFRRKCKYTPKGLF-SYPVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQ-LALALH 273 (311)
Q Consensus 203 -~~g~id~~~L~~~l~~~~~~~~t~LV-s~~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~p-ldl~~l 273 (311)
.+..++.++|++++++++ ..++ +.+++=||.+++.+++ .+ |+++++++++|-+-.-. ...+ ..+..+
T Consensus 153 ~~~~~~d~~~l~~~~~~~~----~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~ 228 (409)
T PLN00143 153 EKGWEVDLDAVEAIADENT----IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228 (409)
T ss_pred CCCCcCCHHHHHHhcccCC----EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh
Confidence 233579999988876542 2233 3344469999997655 33 58899999999986520 1111 122212
Q ss_pred C---CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539 274 R---PDLVLCTLDNNTHAQPL-KITCLLVR 299 (311)
Q Consensus 274 ~---~Dfl~~S~HK~l~G~P~-GiG~L~vr 299 (311)
. .=+++.|+=| .||.|- .+|+++..
T Consensus 229 ~~~~~vi~~~SfSK-~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 229 ASIVPVITLGSISK-RWMIPGWGLGWLVTC 257 (409)
T ss_pred cccCcEEEEccchh-hcCCCccceEEEEee
Confidence 1 2278889999 877452 38999883
No 209
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.77 E-value=1.4e-07 Score=91.77 Aligned_cols=161 Identities=12% Similarity=0.048 Sum_probs=106.3
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.||+++ +++++ +|++|+|+++|+.+++.++ ..+|+.|+.. ..+. . ....++..|.++..+|...
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~-~-~~~~~~~~g~~~~~~~~~~ 144 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHEPYFT-P-YKDQIEMVGGKPIILETYE 144 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCCc-c-hHHHHHHcCCEEEEecCCc
Confidence 5777777777 35554 4999999999999999988 4688988632 2222 1 2233445688888887632
Q ss_pred -CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccCCCC-
Q 021539 203 -LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLALAL- 272 (311)
Q Consensus 203 -~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pldl~~- 272 (311)
.+..++.++|++.++++ +++|.++ ++-||.+++.+++ .+ |+++++++++|-+-.-. +.....+..
T Consensus 145 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 219 (384)
T PRK06348 145 EDGFQINVKKLEALITSK-----TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATL 219 (384)
T ss_pred CcCCcCCHHHHHHhhCcC-----ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhc
Confidence 23357899999888654 3444433 3359999986654 33 58899999999986520 111122211
Q ss_pred ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.+-.+++-|+=| .||.| | +|+++..+++
T Consensus 220 ~~~~~~vi~~~SfSK-~~~l~-GlRiG~~v~~~~~ 252 (384)
T PRK06348 220 AGMPERTITFGSFSK-DFAMT-GWRIGYVIAPDYI 252 (384)
T ss_pred CCCcCcEEEEecchh-ccCCc-cccceeeecCHHH
Confidence 123477789999 87744 5 7998886544
No 210
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.77 E-value=5.4e-08 Score=93.83 Aligned_cols=163 Identities=14% Similarity=0.100 Sum_probs=109.2
Q ss_pred HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
...|+.||+++ +++++ +|++|+|+++++.++++.+. .+|+.|+.. -.+. .....++..|.++..+|.+
T Consensus 68 ~~lr~aia~~~~~~~~~~~~~~--~I~it~G~~~~l~~~~~~~~-~~gd~v~v~~P~y~--~~~~~~~~~g~~~~~~~~~ 142 (368)
T PRK03317 68 VALRADLAAYLTAQTGVGLTVE--NVWAANGSNEILQQLLQAFG-GPGRTALGFVPSYS--MHPIIARGTHTEWVEGPRA 142 (368)
T ss_pred HHHHHHHHHHhhhhccCCCChh--hEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChH--HHHHHHHhcCCeeEEcccC
Confidence 47899999998 45655 49999999999999999873 688887632 2221 1223345568888777765
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCC
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHR 274 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~ 274 (311)
. +..++.+.+++.++.. +++++.++ ++-||..+|.+++.+ ++..++++++|-++.-.+... +.+....
T Consensus 143 ~-~~~~d~~~l~~~~~~~----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~ 217 (368)
T PRK03317 143 A-DFTLDVDAAVAAIAEH----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEY 217 (368)
T ss_pred C-CCCCCHHHHHHHHhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhC
Confidence 3 4467999999888642 13444433 225999999999976 466789999999987422111 1111112
Q ss_pred Cc-EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 275 PD-LVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 275 ~D-fl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.+ +++.|+-| .||.| | +|+++.++++.
T Consensus 218 ~~~i~~~SfSK-~~g~~-GlRiG~~~~~~~~~ 247 (368)
T PRK03317 218 PRLVVSRTMSK-AFAFA-GGRLGYLAAAPAVV 247 (368)
T ss_pred CCEEEEEechh-hhccc-hhhhhhhhCCHHHH
Confidence 34 45569999 88744 6 68888766543
No 211
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.77 E-value=2.6e-07 Score=89.12 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC-c
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD-L 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~-g 205 (311)
..+.|+.+|+++++++++ |++|+|+++++++++..+ .++ .|+ ..-.+. . ....++..|.++..+|.+.++ .
T Consensus 56 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~~--~~~-~v~i~~P~y~-~-~~~~~~~~g~~~~~~~~~~~~~~ 128 (354)
T PRK06358 56 YLELRKRIASFEQLDLEN--VILGNGATELIFNIVKVT--KPK-KVLILAPTFA-E-YERALKAFDAEIEYAELTEETNF 128 (354)
T ss_pred HHHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCC-cEEEecCChH-H-HHHHHHHcCCeeEEEeCccccCC
Confidence 358999999999998765 999999999999999886 233 443 222211 1 233455679999999986432 2
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccC----CCCC
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLA----LALH 273 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pld----l~~l 273 (311)
.+| +++.+.+.++ ++++.+ +++-||..++.+++ .+ |+++++++++|.+-.-. ...+.. +...
T Consensus 129 ~~d-~~~~~~~~~~-----~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 202 (354)
T PRK06358 129 AAN-EIVLEEIKEE-----IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENF 202 (354)
T ss_pred Ccc-HHHHHhhccC-----CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCC
Confidence 466 4554555433 344433 44469999986554 33 57899999999985310 111111 1111
Q ss_pred CCcEEEEccccCcCCCC-CceEEEEEe
Q 021539 274 RPDLVLCTLDNNTHAQP-LKITCLLVR 299 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P-~GiG~L~vr 299 (311)
+-=+++.|+=| .||.| -.+|+++..
T Consensus 203 ~~vi~~~S~SK-~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 203 KNLIIIRAFTK-FFAIPGLRLGYGLTS 228 (354)
T ss_pred CCEEEEEechh-hccCcchhheeeecC
Confidence 11277889999 88744 138888774
No 212
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.75 E-value=1.7e-07 Score=90.84 Aligned_cols=162 Identities=13% Similarity=0.089 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..+.|+.||+++++++++ |++|+|+++++.++...+ ..+||.|+... .+. ... ..++..|.++..+|.+. + .
T Consensus 69 ~~~Lr~~ia~~~~~~~~~--I~it~G~~~~l~~~~~~~-~~~gd~vlv~~p~y~-~~~-~~~~~~g~~~~~vp~~~-~-~ 141 (369)
T PRK08153 69 NHDLRHALAAHHGVAPEN--IMVGEGIDGLLGLIVRLY-VEPGDPVVTSLGAYP-TFN-YHVAGFGGRLVTVPYRD-D-R 141 (369)
T ss_pred cHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEECCCcch-HHH-HHHHHcCCeEEEeeCCC-C-C
Confidence 458999999999998764 999999999999998876 36899887432 222 111 22344688999999864 4 3
Q ss_pred cCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HH--HCCcEEEecccccCccCc--ccCCCCCC-CcEE
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AH--RNAWHVLLDATGLVFGED--QLALALHR-PDLV 278 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~G~~--pldl~~l~-~Dfl 278 (311)
++.+.+.+.+... +++++.+ +++-||+++|.+++.+ ++ ++++++++|-+-.-.+.. ...+.... --++
T Consensus 142 ~~~~~l~~~~~~~----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~ 217 (369)
T PRK08153 142 EDLDALLDAARRE----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIR 217 (369)
T ss_pred CCHHHHHHHhccc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEE
Confidence 6788776655422 1345544 3335899999988754 32 348999999986531211 11222212 2377
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+.|+=| .||.| | +|+++..++.
T Consensus 218 ~~SfSK-~~g~~-GlRiG~~v~~~~~ 241 (369)
T PRK08153 218 MRTFSK-AYGLA-GARVGYAIGAPGT 241 (369)
T ss_pred EecchH-hccCc-chheeeeecCHHH
Confidence 889999 88845 6 6999886654
No 213
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.75 E-value=1.9e-07 Score=90.98 Aligned_cols=163 Identities=15% Similarity=0.046 Sum_probs=105.4
Q ss_pred HHHHHHHHHHc--------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE--EEEcc-CcChHHHHHHHHhCCcEEEE
Q 021539 129 IQARNRALKHC--------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY--YLTII-SEESDYIKGFAAQKESKVIA 197 (311)
Q Consensus 129 e~aR~~IA~~L--------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~--Ils~~-eh~~~~~~~la~~~G~~V~~ 197 (311)
.+.|+.||+++ |++++ .+|++|+|+++++.+++..+ ..+|+. |+... .+. .....++..|.++..
T Consensus 67 ~~lr~aia~~~~~~~~~~~~~~~~-~~i~it~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~--~~~~~~~~~g~~~~~ 142 (393)
T TIGR03538 67 PELRQAIARWLERRFDLPTGVDPE-RHVLPVNGTREALFAFAQAV-INPGQAPLVVMPNPFYQ--IYEGAALLAGAEPYF 142 (393)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCC-ceEEECCCcHHHHHHHHHHH-cCCCCcceEEecCCCCc--chHHHHHhcCCeEEE
Confidence 36888888888 34543 25999999999999999887 367875 54321 111 123345567999999
Q ss_pred EeCCCCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccC----c
Q 021539 198 APETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGE----D 266 (311)
Q Consensus 198 vp~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~----~ 266 (311)
+|.+..+ ..++.+.+++.+.++ ++++.++ ++=||.+++.+++ .+ |+++++++++|-+-.-.-. .
T Consensus 143 v~~~~~~~~~~d~~~l~~~~~~~-----~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 217 (393)
T TIGR03538 143 LNCTAENGFLPDFDAVPESVWRR-----CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNP 217 (393)
T ss_pred eeccccCCCCCCHHHHHHHHhhc-----ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCC
Confidence 9986422 356888888877654 3455443 3359999996554 33 5789999999998653110 1
Q ss_pred ccCC----CCCCC-----cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 267 QLAL----ALHRP-----DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 267 pldl----~~l~~-----Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
+..+ ...+. =+++.|+=| .||.| | +|+++..+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~vi~i~S~SK-~~~~~-GlRvG~~i~~~~l 262 (393)
T TIGR03538 218 PAGLLQAAAQLGRDDFRRCLVFHSLSK-RSNLP-GLRSGFVAGDAEI 262 (393)
T ss_pred CcCHHHhcccccccccccEEEEecchh-hcCCc-ccceEEEecCHHH
Confidence 1111 11111 278899999 77644 5 8888876544
No 214
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.73 E-value=5.7e-08 Score=94.31 Aligned_cols=171 Identities=18% Similarity=0.175 Sum_probs=112.3
Q ss_pred CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCC-EEE-EccCcChHHHHHHHHhCCc
Q 021539 117 TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGN-YYL-TIISEESDYIKGFAAQKES 193 (311)
Q Consensus 117 ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd-~Il-s~~eh~~~~~~~la~~~G~ 193 (311)
.|+++......+++|++.+.++|+++ ++|.|+|.+ |+|..+.++..++.-.++. ++. ...+..+ .. -+++.+-
T Consensus 41 ~SHRsk~~~~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a--~~-eA~~~~~ 116 (365)
T COG1932 41 ISHRSKEFKNVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFA--IK-EAKKVGK 116 (365)
T ss_pred eccccHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhH--HH-HHHHhcc
Confidence 46677778888899999999999996 789999996 8888888888877433332 343 2333221 11 1333332
Q ss_pred --EEEEEe-CCCCCccc-CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcc
Q 021539 194 --KVIAAP-ETWLDLRI-KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQ 267 (311)
Q Consensus 194 --~V~~vp-~~~~~g~i-d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~p 267 (311)
.+..+. ...+.+.+ +.+... +.++ ...|.++++ .+|+..| +.... ..+.++++|++..+ ...+
T Consensus 117 ~~~~~~~~~~~~~~~~iP~~~~~~--~~~~-----~ayv~~~~NeTi~Gv~v~--~~p~~-~~~~~~v~D~SS~i-lsr~ 185 (365)
T COG1932 117 QPKLIDARIEEAGYGSIPDLSKWD--FSDN-----DAYVHFCWNETISGVEVP--ELPDI-GSDGLLVADASSAI-LSRP 185 (365)
T ss_pred cccccccceeccCccCCCChhhcc--cCCC-----ccEEEEecCCcccceEcc--CCCCC-CCCceEEEecccHH-hcCC
Confidence 221111 11112222 111111 2221 345777777 4798777 11111 11288999999999 9999
Q ss_pred cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539 268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
+|++ +.|.+.++.+| -+| |.|++++++|+++++..
T Consensus 186 iDvs--k~dviyagaQK-nlG-paGltvvIvr~~~l~r~ 220 (365)
T COG1932 186 IDVS--KYDVIYAGAQK-NLG-PAGLTVVIVRPDLLERA 220 (365)
T ss_pred CChh--HcceEEEehhh-ccC-ccceEEEEEcHHHHhcc
Confidence 9997 46999999999 999 99999999999988764
No 215
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.72 E-value=3.8e-08 Score=94.13 Aligned_cols=173 Identities=16% Similarity=0.066 Sum_probs=122.7
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC---CEEEEccC-cChH--HHHHHHHhCCcEE----EEEe
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG---NYYLTIIS-EESD--YIKGFAAQKESKV----IAAP 199 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G---d~Ils~~e-h~~~--~~~~la~~~G~~V----~~vp 199 (311)
-.-..++...|+...| |....+-|--++.+.-+| +++. -.|+.... .+++ ++..-++-+|..+ +.+.
T Consensus 115 ~il~l~~~iVGA~e~E--vavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ie 191 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENE--VAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIE 191 (465)
T ss_pred hhhhhhhhhccCCchh--hhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEec
Confidence 4566788899997655 888889998899888887 2322 22431111 1111 2322234456543 2233
Q ss_pred CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHH-HHCCcEEEecccccCccCcccCCCCCCCc
Q 021539 200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQLALALHRPD 276 (311)
Q Consensus 200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~pldl~~l~~D 276 (311)
..+....+..+++-+.+..+. ....+|+++.+ -||+..+|..|..| +..|++|=.|-||++ |..|+-+..+++|
T Consensus 192 PREGEetlRteDILd~IEkng--DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAv-gNVpL~LHdWgVD 268 (465)
T KOG3846|consen 192 PREGEETLRTEDILDTIEKNG--DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAV-GNVPLQLHDWGVD 268 (465)
T ss_pred ccccccchhHHHHHHHHHhcC--CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhh-cCCceEEeecCCc
Confidence 222122345567777776542 24689999877 59999999999988 668999999999999 9999999999999
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS 308 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p 308 (311)
|.|-..+|++..+|-|+|.|+|..+....+.|
T Consensus 269 FACWCSYKYlnaGaGgIgGlFvHekh~~~~~p 300 (465)
T KOG3846|consen 269 FACWCSYKYLNAGAGGIGGLFVHEKHTKESLP 300 (465)
T ss_pred eEEEeeecccccCCCccceeeeehhhhcchhh
Confidence 99999999777669999999999887655444
No 216
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.72 E-value=2.6e-07 Score=88.11 Aligned_cols=168 Identities=13% Similarity=0.058 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
.++.|+.+|++++ .+++ ..|++|+|+.+++..+...+...+|+.|+.. ..|. . ....++..|.++..+|.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~-~-~~~~~~~~g~~~~~~~~ 122 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYP-S-YIEAARLLGAEVIPVPL 122 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSST-H-HHHHHHHTTSEEEEEEE
T ss_pred hHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCCccc-c-ccccccccCceeeeccc
Confidence 4589999999999 6554 2499999999999887776633578887633 2333 2 33445667999988885
Q ss_pred CC-CCcccCHHHHHhhhhccCCCC-CceEEEEec--ccccchhcHHHHHH----HHHCCcEEEecccccCccCcc-----
Q 021539 201 TW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPV--VVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQ----- 267 (311)
Q Consensus 201 ~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~--~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~p----- 267 (311)
+. .+..++.++|++.+++...+. ++.++.++. +-||..+|.+++.+ ++++|+++++|-++.. ....
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~ 201 (363)
T PF00155_consen 123 DSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD-LIFGDPDFG 201 (363)
T ss_dssp EETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT-GBSSSSHTH
T ss_pred cccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec-cccCCCccC
Confidence 31 256789999999998631111 135555542 25999999887633 5789999999999986 3222
Q ss_pred ---cCCCCCCC-cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 268 ---LALALHRP-DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 268 ---ldl~~l~~-Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
..+.. .. -+++.|+-| .||.| | +|++++.++.
T Consensus 202 ~~~~~~~~-~~~vi~~~S~SK-~~g~~-GlRvG~i~~~~~~ 239 (363)
T PF00155_consen 202 PIRSLLDE-DDNVIVVGSLSK-SFGLP-GLRVGYIVAPPEL 239 (363)
T ss_dssp HHHGHHTT-TSTEEEEEESTT-TTTSG-GGTEEEEEEEHHH
T ss_pred cccccccc-cccceeeeeccc-ccccc-ccccccccchhhh
Confidence 22222 33 499999999 88855 6 8999986543
No 217
>PRK07049 methionine gamma-lyase; Validated
Probab=98.71 E-value=4.7e-07 Score=90.35 Aligned_cols=160 Identities=11% Similarity=0.011 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC--hHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE--SDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~--~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
....++.||++.|.+ + +++|+|+++|+.+++.++ .++||+|+... .+. ...+...++..|+++..++..
T Consensus 85 ~~~Le~~lA~leg~~--~--~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~--- 156 (427)
T PRK07049 85 SEIVEDRLAVYEGAE--S--AALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG--- 156 (427)
T ss_pred HHHHHHHHHHHhCCC--c--EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC---
Confidence 457888999999963 3 777888888999888876 46899986432 222 112233345668886555521
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHH------CCcEEEecccccC-ccCcccCCCCCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHR------NAWHVLLDATGLV-FGEDQLALALHR 274 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~------~g~~vlvDAaQsv-~G~~pldl~~l~ 274 (311)
.+.+++++.+.+.....++++|.+. .+-+|.++|+++|.+ ++. +++.+++|-+=+- ....|+ .++
T Consensus 157 --~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl---~~g 231 (427)
T PRK07049 157 --LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL---EHG 231 (427)
T ss_pred --CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc---ccC
Confidence 3566777766532111125565543 225999999999966 455 7899999998221 022233 357
Q ss_pred CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 275 PDLVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
+|+++.|+-| .+|+..| +|+++.+++
T Consensus 232 ~divv~S~SK-~~gG~~glr~G~vv~~~~ 259 (427)
T PRK07049 232 ADLSVYSLTK-YVGGHSDLVAGAVLGRKA 259 (427)
T ss_pred CCEEEEcCce-eecCCCCcEEEEEECCHH
Confidence 8999999999 6663333 676665544
No 218
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.70 E-value=3.1e-07 Score=88.98 Aligned_cols=164 Identities=16% Similarity=0.096 Sum_probs=108.0
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-CCc-
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTIISEESDYIKGFAAQKESKVIAAPETW-LDL- 205 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~-~~g- 205 (311)
.+.|+.||+++|+++++ |++|+|+++++++++..+. .+| +.|+...-... .....++..|.++..+|.+. .++
T Consensus 62 ~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~ 137 (364)
T PRK04781 62 PGLRSALAALYGCAPEQ--LLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFG-MYAVCARLQNAPLVEVPLVDGADGF 137 (364)
T ss_pred HHHHHHHHHHhCcChHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH-HHHHHHHHcCCEEEEEecCCCccCC
Confidence 47999999999998764 9999999999999998873 566 66653221112 22334556799999999742 123
Q ss_pred ccCHHHHHhhh-hccCCCCCceEEEEec--ccccchhcHHHHHH-HH--HCCcEEEecccccCc-cC-cccCC-CCCCCc
Q 021539 206 RIKGSQLSQNF-RRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AH--RNAWHVLLDATGLVF-GE-DQLAL-ALHRPD 276 (311)
Q Consensus 206 ~id~~~L~~~l-~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~-G~-~pldl-~~l~~D 276 (311)
.++.+++.+.+ ..+ +++|.++. +-||.++|.+++.+ ++ +.++++++|.+-.-. .. ..+.+ ...+-=
T Consensus 138 ~~d~~~l~~~~~~~~-----~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~v 212 (364)
T PRK04781 138 HADVPAIVAAALASN-----AKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNL 212 (364)
T ss_pred CcCHHHHHHHHhccC-----CeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCE
Confidence 46777765444 332 46666542 25999999998855 33 247899999985420 11 11111 112223
Q ss_pred EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+++-|+=| .||.| | +|.++..+++.
T Consensus 213 i~~~SfSK-~~gl~-GlRvGy~v~~~~l~ 239 (364)
T PRK04781 213 AVLRTLSK-AHALA-AARIGSLIANAELI 239 (364)
T ss_pred EEEecChh-hcccc-cceeeeeeCCHHHH
Confidence 77889999 88844 5 79998876554
No 219
>PRK09148 aminotransferase; Validated
Probab=98.70 E-value=2e-07 Score=91.62 Aligned_cols=164 Identities=10% Similarity=-0.009 Sum_probs=104.3
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.+|+++ | ++++ .+|++|+|+++++.+++..+ ..+||.|+.. ..+.. ....++..|.++..+|.+.
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~v~~v~~~~ 147 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPD-TQVVATLGSKEGFANMAQAI-TAPGDVILCPNPSYPI--HAFGFIMAGGVIRSVPAEP 147 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc--cHHHHHhcCCEEEEEeCCC
Confidence 6888888877 4 4444 14999999999999999988 4689988632 23321 1222345699999999864
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCccc-CCCC-
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQL-ALAL- 272 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pl-dl~~- 272 (311)
+ +. ..+++++.++.... +++++.+. ++=||..+|.+++ .+ |+++|+++++|-+..-. +..+. .+..
T Consensus 148 ~-~~-~~~~l~~~~~~~~~--~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~ 223 (405)
T PRK09148 148 D-EE-FFPALERAVRHSIP--KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQV 223 (405)
T ss_pred C-CC-CccCHHHHHhhccc--cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhC
Confidence 2 22 23445555542111 13455443 4469999998654 33 58899999999987520 11111 1211
Q ss_pred ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.+..+++.|+-| .||.| | +|+++..+++.
T Consensus 224 ~~~~~~~i~~~SfSK-~~~~p-GlR~G~~v~~~~~i 257 (405)
T PRK09148 224 PGAKDVTVEFTSMSK-TFSMA-GWRMGFAVGNERLI 257 (405)
T ss_pred CCccCcEEEEecccc-ccCCc-chheeeeeCCHHHH
Confidence 123466899999 88844 7 99998766543
No 220
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.70 E-value=3.6e-07 Score=89.45 Aligned_cols=165 Identities=13% Similarity=0.024 Sum_probs=101.5
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC-Ccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL-DLR 206 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~-~g~ 206 (311)
+...+.+++.+|..-+..+|++|+|+|+|+++++.++ +.+||.|+.. ..+.. .. ......+.++..++.+.+ +..
T Consensus 77 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~-y~-~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 77 KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-LEAGDEVIIPAPYWVS-YP-DMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCCCcC-HH-HHHHHcCCEEEEecCCcccCCC
Confidence 3444455556676322235999999999999998876 5789988633 22221 11 112234666666776432 345
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHC-CcEEEecccccCc---cCcccCCCCC---
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRN-AWHVLLDATGLVF---GEDQLALALH--- 273 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~-g~~vlvDAaQsv~---G~~pldl~~l--- 273 (311)
++.+.|++.++++ ++++.++ ++-||..+|.+++ .+ |+++ ++++++|-+-+-. +.....+...
T Consensus 154 ~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~ 228 (402)
T PRK06107 154 LTPEALEAAITPR-----TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE 228 (402)
T ss_pred CCHHHHHhhcCcC-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC
Confidence 7888998888654 3444443 3369999998665 33 5787 9999999765310 1111112111
Q ss_pred --CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 274 --RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 274 --~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+--+++.|+.| .|| ..| +|+++..+++.
T Consensus 229 ~~~~vi~~~S~SK-~~~-~pGlRiG~~~~~~~~~ 260 (402)
T PRK06107 229 LRDRVLVTNGVSK-TYA-MTGWRIGYAAGPADLI 260 (402)
T ss_pred ccCCEEEEeccch-hhc-CcccceeeeecCHHHH
Confidence 23466778899 888 447 59998776554
No 221
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.69 E-value=3.9e-07 Score=92.63 Aligned_cols=167 Identities=12% Similarity=0.127 Sum_probs=107.0
Q ss_pred HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEe
Q 021539 129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAP 199 (311)
Q Consensus 129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp 199 (311)
.+.|+.||++++ +++++ |++|+|+++|+.+++..+ ..+||.|+... .+. .....+..+.|+++..+|
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~--Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~-~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPER--VVMSGGATGANETIMFCL-ADPGDVFLIPSPYYA-AFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhh--EEEccchHHHHHHHHHHh-CCCCCEEEECCCCcc-chHHHHHhhCCCEEEEEe
Confidence 368888888876 56654 999999999999999988 46899886332 222 112222224699999999
Q ss_pred CCCC-CcccCHHHHHhhhhccC-CCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc---cCccc
Q 021539 200 ETWL-DLRIKGSQLSQNFRRKC-KYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GEDQL 268 (311)
Q Consensus 200 ~~~~-~g~id~~~L~~~l~~~~-~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~pl 268 (311)
.+.. +..++.+.+++.++... ...+++++.++ ++=||+++|.+++.+ |+++++++++|-+.+.. +....
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~ 252 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFV 252 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcc
Confidence 8532 34678888876543210 00124444333 335999999887632 57899999999987641 21122
Q ss_pred CCCCC---------CCc--EEEEccccCcCCCC-CceEEEEEeC
Q 021539 269 ALALH---------RPD--LVLCTLDNNTHAQP-LKITCLLVRR 300 (311)
Q Consensus 269 dl~~l---------~~D--fl~~S~HK~l~G~P-~GiG~L~vr~ 300 (311)
.+..+ +.| .++.|+-| .||.| -.+|+++..+
T Consensus 253 si~~l~~~~~~~~~~~~~v~vv~S~SK-~~glpGlRvG~li~~~ 295 (496)
T PLN02376 253 SVAEVVNDVDISEVNVDLIHIVYSLSK-DMGLPGFRVGIVYSFN 295 (496)
T ss_pred cHHHhhccccccccCCCeEEEEEeccc-cCCCCcceEEEEEECC
Confidence 22111 234 34679999 88745 2489999854
No 222
>PRK15029 arginine decarboxylase; Provisional
Probab=98.68 E-value=5.6e-07 Score=95.61 Aligned_cols=169 Identities=9% Similarity=-0.006 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL- 203 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~- 203 (311)
...+.+|.+..|+++|++. .-..|.|+|.|+..++.+. .++||.|+..-.-|-+.+..+. -.|++.++++..++
T Consensus 204 ~G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al~-L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 204 TGAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGLI-LTGAKPVYMVPSRNR 278 (755)
T ss_pred CcHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeEEEecccccc
Confidence 3456799999999999963 3566889999998888876 4789998755543433333332 34888888754321
Q ss_pred C---cccC-----HHHHHhhhhccCCC-----CCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-
Q 021539 204 D---LRIK-----GSQLSQNFRRKCKY-----TPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ- 267 (311)
Q Consensus 204 ~---g~id-----~~~L~~~l~~~~~~-----~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p- 267 (311)
. +.++ .+.+++.++..+.. .+...+.++.- --|+..+++.|.+ ||++|++++||-||.. |..
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F 356 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYG--YARF 356 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccc--cccc
Confidence 1 2344 88898888653210 11124444433 4799999999966 6999999999999874 221
Q ss_pred ---cC----C-----CCCCCc-EEEEccccCcCCCCCceEEEEEeCC
Q 021539 268 ---LA----L-----ALHRPD-LVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 268 ---ld----l-----~~l~~D-fl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
+. + ...++| +++-|.|| .+++-+....|-++.+
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHK-tL~alTQaS~LHv~~~ 402 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHK-LLNALSQASYIHVREG 402 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhh-cccchhhhhhheeCCC
Confidence 11 1 125788 99999999 7776788888888765
No 223
>PRK08175 aminotransferase; Validated
Probab=98.68 E-value=3.7e-07 Score=89.09 Aligned_cols=164 Identities=12% Similarity=0.027 Sum_probs=105.4
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.|++++ | +++++ +|++|+|+++++++++..+ ..+|+.|+.. ..+... . ..++..|+++..+|.+
T Consensus 70 ~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~-~-~~~~~~g~~~~~v~~~ 145 (395)
T PRK08175 70 PRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEGLAHLMLAT-LDHGDTVLVPNPSYPIH-I-YGAVIAGAQVRSVPLV 145 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcch-H-HHHHHcCCeEEEEecc
Confidence 36777777765 3 34431 4999999999999998887 4789998643 333311 1 1123468999999987
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALAL 272 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~ 272 (311)
. ++ ...+++++.++... .+++++.+. ++-||.++|.+ +|.+ |+++|+++++|-+-.-. +.....+..
T Consensus 146 ~-~~-~~~~~l~~~l~~~~--~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~ 221 (395)
T PRK08175 146 E-GV-DFFNELERAIRESY--PKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQ 221 (395)
T ss_pred c-CC-CcHHHHHHHHhhcc--CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhc
Confidence 5 22 24677888776421 124565554 33699999995 4433 68999999999876420 111222211
Q ss_pred ----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 ----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 ----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.+..+++.|+=| .||.| | +|+++..+++
T Consensus 222 ~~~~~~~~i~~~S~SK-~~g~p-GlRiG~~~~~~~l 255 (395)
T PRK08175 222 VPGAKDVAVEFFTLSK-SYNMA-GWRIGFMVGNPEL 255 (395)
T ss_pred CCCcccCEEEEeeccc-cccCc-chhheeeeCCHHH
Confidence 123467899999 88755 6 7988876544
No 224
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.68 E-value=4.8e-07 Score=88.03 Aligned_cols=159 Identities=13% Similarity=0.104 Sum_probs=108.2
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.+.|+.||+++|+++++ |++|+|++++++++...+ ..+||.|+.. ..+. .....++..|.++..+|.+ ++.+
T Consensus 67 ~~Lr~aia~~~~~~~~~--I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y~--~~~~~~~~~g~~v~~v~~~--~~~~ 139 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQ--VLCGSGLDEVIQIISRAV-LKAGDNIVTAGATFP--QYRHHAIIEGCEVKEVALN--NGVY 139 (366)
T ss_pred HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcHH--HHHHHHHHcCCEEEEeecC--CCCc
Confidence 47999999999998765 999999999999999987 4689988633 2211 1223355679999999986 3458
Q ss_pred CHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-H---HHCCcEEEecccccC-ccCc----ccC-CCCCCC
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-A---HRNAWHVLLDATGLV-FGED----QLA-LALHRP 275 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a---~~~g~~vlvDAaQsv-~G~~----pld-l~~l~~ 275 (311)
+.++|++.++++ ++++.++ ++-||+++|.+++.+ + ++++ .+++|-+-.- .... .+. +...+-
T Consensus 140 d~~~l~~~~~~~-----~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T PRK01533 140 DLDEISSVVDND-----TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKN 213 (366)
T ss_pred CHHHHHHHhCcC-----CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCC
Confidence 999999888754 3455443 336999999988754 2 3344 5777877531 0110 111 111223
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
-+++-|+=| .||.| | +|+++..+++
T Consensus 214 vi~~~SfSK-~~~l~-GlRiG~~i~~~~~ 240 (366)
T PRK01533 214 ILVLRTFSK-AYGLA-SFRVGYAVGHEEL 240 (366)
T ss_pred EEEEeCchH-HhcCh-HHHHhHHhCCHHH
Confidence 478899999 88844 6 6888765543
No 225
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.67 E-value=9e-07 Score=87.52 Aligned_cols=161 Identities=11% Similarity=-0.010 Sum_probs=107.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIA 197 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~ 197 (311)
+|......+...+++|++-|+. . ++.++++-.|+..++.++ .++||+|+.... +. ...++.+..+.|+++.+
T Consensus 50 ~R~gnPt~~~le~~la~Le~g~--~--a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~ 124 (386)
T PF01053_consen 50 SRYGNPTVRALEQRLAALEGGE--D--ALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTF 124 (386)
T ss_dssp TTTC-HHHHHHHHHHHHHHT-S--E--EEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEE
T ss_pred eccccccHHHHHHHHHHhhccc--c--eeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcEEEE
Confidence 6666666678888999999983 2 666788888887777776 578999874433 22 22344455668999998
Q ss_pred EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCC-cEEEecccccCccCcccCCCCC
Q 021539 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNA-WHVLLDATGLVFGEDQLALALH 273 (311)
Q Consensus 198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g-~~vlvDAaQsv~G~~pldl~~l 273 (311)
++.. +.++|+++++++ +++|-+- .+-+..+.||+.|++ +|++| ++++||.|=+- + ..++-=.+
T Consensus 125 ~d~~------d~~~l~~~l~~~-----t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~at-p-~~~~pL~~ 191 (386)
T PF01053_consen 125 VDPT------DLEALEAALRPN-----TKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFAT-P-YNQNPLEL 191 (386)
T ss_dssp ESTT------SHHHHHHHHCTT-----EEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTH-T-TTC-GGGG
T ss_pred eCch------hHHHHHhhcccc-----ceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccc-e-eeeccCcC
Confidence 8653 578999999875 5777653 234789999999976 69999 99999999654 3 22222235
Q ss_pred CCcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539 274 RPDLVLCTLDNNTHAQPLK--ITCLLVRR 300 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~G--iG~L~vr~ 300 (311)
++|+++-|+-| .+++... .|++++++
T Consensus 192 GaDivv~S~TK-yl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 192 GADIVVHSATK-YLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp T-SEEEEETTT-TTTTSSSE-EEEEEESS
T ss_pred CceEEEeeccc-cccCCcceeeEEEEECc
Confidence 89999999999 5553422 55555554
No 226
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.67 E-value=1.3e-06 Score=86.28 Aligned_cols=164 Identities=13% Similarity=0.118 Sum_probs=111.7
Q ss_pred HHHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 129 IQARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 129 e~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
.+.|+.||+++ | ++++ .+|++|+|+++++.+++..+ ..+||.|+. ...+.. ....++..|.++..+|.
T Consensus 84 ~~lr~aia~~~~~~~g~~~~~~~-~~I~it~Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~~ 159 (410)
T PRK06290 84 QEFKEAAARYMEKVFGVKDIDPV-TEVIHSIGSKPALAMLPSCF-INPGDVTLMTVPGYPV--TGTHTKYYGGEVYNLPL 159 (410)
T ss_pred HHHHHHHHHHHHHHcCCCcCCCc-ceEEEccCHHHHHHHHHHHh-CCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEec
Confidence 46788888875 4 4443 24999999999999999887 468898853 223321 23345567999999998
Q ss_pred CCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccCC-
Q 021539 201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLAL- 270 (311)
Q Consensus 201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pldl- 270 (311)
+.+ +..++.+.+++.+..+ +++|.+ +++=||+++|.+++ .+ |+++|+++++|-+..-. +..+..+
T Consensus 160 ~~~~~~~~d~~~l~~~~~~~-----~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~ 234 (410)
T PRK06290 160 LEENNFLPDLDSIPKDIKEK-----AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFL 234 (410)
T ss_pred CCCcCCcCCHHHHHHhhccc-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChh
Confidence 742 2456888888877654 345444 34469999997655 33 58899999999987741 1111222
Q ss_pred --CC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 271 --AL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 271 --~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.. .+.++++-|+=| .||.| | +|+++..+++.
T Consensus 235 ~~~~~~~~~I~i~SfSK-~~g~~-GlRiG~ii~~~~l~ 270 (410)
T PRK06290 235 SVPGAKEVGVEIHSLSK-AYNMT-GWRLAFVVGNELIV 270 (410)
T ss_pred cCCCccccEEEEeechh-hcCCc-hhheEeEEeCHHHH
Confidence 11 245799999999 88744 7 79998766543
No 227
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=98.67 E-value=1.3e-08 Score=104.40 Aligned_cols=204 Identities=17% Similarity=0.124 Sum_probs=131.1
Q ss_pred ccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcchhhhhHHHHHHHHHHH
Q 021539 57 VEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRAL 136 (311)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA 136 (311)
|.||.+++ ..+|++.++...+...+.-.|||+.+ .. ++......+++|-+|.
T Consensus 23 yldhag~t-----l~sesq~~g~~~~sq~~e~~nphs~~---------~t--------------s~~l~~~v~Q~r~ril 74 (728)
T KOG2142|consen 23 YLDHAGRT-----LFSESQLEGVAFQSQSSENANPHSHL---------GT--------------SRSLARLVAQVRLRIL 74 (728)
T ss_pred HHHhhhhh-----hhhhcccchhhhhhhccccCCCcccc---------cc--------------hHHHHHHHHHHHHHHH
Confidence 78888888 78888887654444446666677755 22 3334556679999999
Q ss_pred HHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC-CCCEE---EE-ccCcChHH---HHHHHHhCCcEEEEE-eCC--CCCc
Q 021539 137 KHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF-KGNYY---LT-IISEESDY---IKGFAAQKESKVIAA-PET--WLDL 205 (311)
Q Consensus 137 ~~Lga~~dey~VvFTsnaTealnlv~~s~~~~-~Gd~I---ls-~~eh~~~~---~~~la~~~G~~V~~v-p~~--~~~g 205 (311)
.+++...++|.++||. .|+|+.+++++|||- .+..+ -+ .+.|-+.. ++. ...|+-+..+ ..+ |...
T Consensus 75 ~~f~tta~dy~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~--~~~~~gl~sy~q~~~i~~~~ 151 (728)
T KOG2142|consen 75 ALFNTTAFDYEVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRL--DYSGIGLFSYSQTNEISDSE 151 (728)
T ss_pred HHhccccccccchhHH-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeee--eeeccceEEeeeeeeccccc
Confidence 9999999999999999 999999999999974 33333 11 11222211 111 1113322222 111 1111
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHH-HHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL 282 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~ 282 (311)
..+..+....+. ...|++.+++ +.|..+-...+..+ -..+++++||++.-+ ..-|+|++...+||... +
T Consensus 152 ~~sls~~~~~ls------~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrv-Saf~Ldaesy~f~~~~~-l 223 (728)
T KOG2142|consen 152 EFSLSESEANLS------EHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRV-SAFPLDAESYPFDFNPK-L 223 (728)
T ss_pred cccccccccCcc------cchhcccchhcccccceeeeeeecccccCCceEEEEEeeccc-ccccchHhhCCCcccch-h
Confidence 111111111111 2367877766 57776222222333 367999999999999 99999999999999999 9
Q ss_pred ccCcCCCCCceEEEEEeCCC
Q 021539 283 DNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 283 HK~l~G~P~GiG~L~vr~~~ 302 (311)
+| +||+|. |+|.+.++.
T Consensus 224 lt-iFgyet--gAvlv~~r~ 240 (728)
T KOG2142|consen 224 LT-IFGYET--GAVLVMNRS 240 (728)
T ss_pred ee-ecCCCc--hhhHHHhhh
Confidence 99 999997 767666544
No 228
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.63 E-value=1.1e-06 Score=85.81 Aligned_cols=162 Identities=13% Similarity=0.062 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCC-CEEE-EccCcChH--HHHHHHH---
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKG-NYYL-TIISEESD--YIKGFAA--- 189 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~G-d~Il-s~~eh~~~--~~~~la~--- 189 (311)
....++.-++++++++. + .++|++++|+|+..++... ...+| +.|+ .....|.. .+..+..
T Consensus 82 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~ 157 (401)
T PRK00854 82 NDQLAPLYEELAALTGS--H--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPD 157 (401)
T ss_pred CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcc
Confidence 44556777788898875 2 3999999999988766543 11123 4554 44344421 1111100
Q ss_pred ------hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEe
Q 021539 190 ------QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLL 256 (311)
Q Consensus 190 ------~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlv 256 (311)
.....+..+|. .|.++|++.+.++ +++|.+... .+|.+.| +++|.+ |+++|+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~------~d~~~le~~i~~~-----~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~ 226 (401)
T PRK00854 158 ARGGFGPFTPGFRVVPF------GDAEALEAAITPN-----TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLIL 226 (401)
T ss_pred ccccCCCCCCCeEEeCC------CCHHHHHHHhCCC-----eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 00123333433 2568888888654 466666443 5899998 888865 7999999999
Q ss_pred ccccc-CccCccc----CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 257 DATGL-VFGEDQL----ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 257 DAaQs-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|.+|+ + |.... +.....+|+++++ |++.|+=--+|+++.+++..+
T Consensus 227 DEv~~g~-g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~ 276 (401)
T PRK00854 227 DEIQTGL-GRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLG 276 (401)
T ss_pred echhhCC-CCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHh
Confidence 99998 6 76542 2223468999997 955442112788888876544
No 229
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.62 E-value=7.3e-07 Score=85.65 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=104.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC-Ccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL-DLR 206 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~-~g~ 206 (311)
.+.|+.||+++++++++ |++|+|+++++++++..+ .++||.|+.. ..+. . ....++..|.++..+|++.. +..
T Consensus 68 ~~lr~~ia~~~~~~~~~--I~it~G~~~al~~~~~~~-~~~gd~V~v~~P~y~-~-~~~~~~~~g~~~~~~~l~~~~~~~ 142 (357)
T PRK14809 68 ADLTAALADRWDVSPEQ--VWLANGGDGALDYLARAM-LDPGDTVLVPDPGFA-Y-YGMSARYHHGEVREYPVSKADDFE 142 (357)
T ss_pred HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChH-H-HHHHHHHcCCeEEEEecccCcCCC
Confidence 47999999999998765 999999999999999887 4789987632 1211 1 12223456888988887532 234
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HH--HCCcEEEecccccCccCcc--cCC-CCCCCcEE
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AH--RNAWHVLLDATGLVFGEDQ--LAL-ALHRPDLV 278 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~G~~p--ldl-~~l~~Dfl 278 (311)
++.+.+.+... + ++++.++ ++-||+.+|.+++.+ ++ +.+.++++|-+..-....+ +.. ...+-=++
T Consensus 143 ~~~~~~~~~~~-~-----~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~ 216 (357)
T PRK14809 143 QTADTVLDAYD-G-----ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAV 216 (357)
T ss_pred cCHHHHHHhhc-C-----CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEE
Confidence 56666655442 2 3454443 225999999988754 33 2478899999876311111 111 11111266
Q ss_pred EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 279 LCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 279 ~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.|+=| .||.| | +|+++..++..
T Consensus 217 ~~SfSK-~~~~~-GlRiG~~~~~~~~~ 241 (357)
T PRK14809 217 LRTFSK-AYGLA-GLRLGYAVVPEEWA 241 (357)
T ss_pred Eecchh-HhcCc-chhheeeecCHHHH
Confidence 778899 88844 6 79888776543
No 230
>PRK08068 transaminase; Reviewed
Probab=98.60 E-value=1e-06 Score=85.78 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=108.9
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.||+++ | +++++ +|+.|+|+++++.+++..+ ..+|+.|+.. ..+. . ....++..|++++.+|.+.
T Consensus 74 ~lr~aia~~~~~~~g~~~~~~~-~i~it~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~-~-~~~~~~~~g~~~~~i~~~~ 149 (389)
T PRK08068 74 FLKEAAADFYKREYGVTLDPET-EVAILFGGKAGLVELPQCL-MNPGDTILVPDPGYP-D-YLSGVALARAQFETMPLIA 149 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcHHHHHHHHHHh-CCCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEeeccc
Confidence 6788888886 5 44441 4999999999999988877 3688987632 2222 1 1223455699999999864
Q ss_pred C-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539 203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALAL 272 (311)
Q Consensus 203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~~ 272 (311)
+ +..++.+++++.++.+ +++|.+ +++=||+++|.+++. + |+++++++++|-+..-. +..+..+-.
T Consensus 150 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~ 224 (389)
T PRK08068 150 ENNFLPDYTKIPEEVAEK-----AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQ 224 (389)
T ss_pred ccCCCCCHHHHHHhcccc-----ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhh
Confidence 3 3356888888887644 344443 344699999997653 2 57899999999986421 112222211
Q ss_pred ----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 273 ----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 273 ----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.+..+++.|+=| .||.| | +|+++..+++.
T Consensus 225 ~~~~~~~~i~~~S~SK-~~g~~-GlRiG~~~~~~~l~ 259 (389)
T PRK08068 225 TPGAKDVGIELYTLSK-TFNMA-GWRVAFAVGNESVI 259 (389)
T ss_pred CCCccCCEEEEecchh-ccCCc-cceeEeEecCHHHH
Confidence 123478889999 88844 7 89998776554
No 231
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.57 E-value=6.9e-07 Score=89.92 Aligned_cols=166 Identities=5% Similarity=-0.078 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..+.|+.||++++ ++++ +|++|+|+++|+.+++..+...+||.|+... .+. . ....++..|.++..+|.
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~-~-y~~~~~~~g~~~v~v~~ 192 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPS--DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYP-L-YSAAITLLGGKQVPYYL 192 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChh--hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCch-h-HHHHHHHcCCEEEEEEe
Confidence 3478999999875 4554 4999999999999999887435899886432 222 1 22334556999999998
Q ss_pred CCCC-cccCHHHHHhhhhccCCC-CCceEEE-E-ecccccchhcHH---HHHH-HHHCCcEEEecccccCccC---cc-c
Q 021539 201 TWLD-LRIKGSQLSQNFRRKCKY-TPKGLFS-Y-PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGE---DQ-L 268 (311)
Q Consensus 201 ~~~~-g~id~~~L~~~l~~~~~~-~~t~LVs-~-~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~---~p-l 268 (311)
+..+ ..++.++|++.+.+..++ .+++++. + +++=||.+++.+ +|.+ |+++++++++|-+-.-.-. .+ .
T Consensus 193 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~ 272 (481)
T PTZ00377 193 DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFI 272 (481)
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcc
Confidence 6432 367899999988641100 0244443 3 234699999955 4544 5889999999987542000 01 1
Q ss_pred CC----CCCCCc-------EEEEccccCcCCCCCc--eEEEEE
Q 021539 269 AL----ALHRPD-------LVLCTLDNNTHAQPLK--ITCLLV 298 (311)
Q Consensus 269 dl----~~l~~D-------fl~~S~HK~l~G~P~G--iG~L~v 298 (311)
.+ ..+..+ +++-|+=|.++| ..| +|.+++
T Consensus 273 s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~-~~GlRiG~~~~ 314 (481)
T PTZ00377 273 SFRKVLLELPAEYNTDVELVSFHSTSKGIIG-ECGRRGGYFEL 314 (481)
T ss_pred cHHHHHHhhcccccCCeEEEEEecCCccccc-CCcCceEEEEE
Confidence 11 011111 455688994465 334 788876
No 232
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.57 E-value=3.1e-07 Score=90.15 Aligned_cols=165 Identities=14% Similarity=0.024 Sum_probs=110.2
Q ss_pred hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc----cCcChHHHH-HHHHhCCcE
Q 021539 121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI----ISEESDYIK-GFAAQKESK 194 (311)
Q Consensus 121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~----~eh~~~~~~-~la~~~G~~ 194 (311)
|-+....+ +-|.++..++||++-.+ |= --+++.|+..+..++ .++||.|+.. -+|-+...+ .+... -++
T Consensus 66 Gce~VD~vE~laierak~LFga~~an--VQ-PhSGs~AN~av~~Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~-~~~ 140 (413)
T COG0112 66 GCEYVDEVEELAIERAKKLFGAEYAN--VQ-PHSGSQANQAVYLAL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGK-LFN 140 (413)
T ss_pred CCeeHHHHHHHHHHHHHHHhCCCccc--cC-CCCchHHHHHHHHHH-cCCCCeEecccCCCCCcccCCCCCCccce-eEE
Confidence 44444444 46999999999996322 32 236677877777776 5799998622 122211110 11111 156
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----c
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-----L 268 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-----l 268 (311)
+..-+++.+++.||.|++++...+. +.+|+.+-...--...|++++.+ |.+.|+++++|++|-+ |.+- =
T Consensus 141 ~v~Y~vd~et~~IDyD~~~k~a~e~----kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHia-GLVA~G~~p~ 215 (413)
T COG0112 141 VVSYGVDPETGLIDYDEVEKLAKEV----KPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVA-GLIAGGVHPN 215 (413)
T ss_pred eEecccccccCccCHHHHHHHHHHh----CCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHH-HHHhcccCCC
Confidence 6667788767999999999887763 24566654434667889999987 5899999999999987 6543 3
Q ss_pred CCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539 269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 269 dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
++. .+|+++.|-||++.| |+| |+.+.+
T Consensus 216 P~~--~AdvVTtTTHKTlrG-PrG-G~Il~~ 242 (413)
T COG0112 216 PLP--HADVVTTTTHKTLRG-PRG-GIILTN 242 (413)
T ss_pred CCC--ccceEeCCcccCCCC-CCc-eEEEec
Confidence 343 289999999997777 975 344434
No 233
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.8e-06 Score=84.40 Aligned_cols=160 Identities=14% Similarity=0.020 Sum_probs=113.5
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
+...++||.+=|--. -+.|+++..|+-.++..+ .+.||+|++... +- .+......++.|++|+++..+
T Consensus 65 ~vlE~RiAaLEGG~a----a~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~---- 135 (426)
T COG2873 65 DVLEERIAALEGGVA----ALAVASGQAAITYAILNL-AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD---- 135 (426)
T ss_pred HHHHHHHHHhhcchh----hhhhccchHHHHHHHHHh-ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC----
Confidence 456667887777532 345666667776666665 368999984332 11 333444457789999998654
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL 282 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~ 282 (311)
+++.+++.+++++ ++|-+ +.. --+.+.|++.|++ ||++|++++||-+=+- +.. +.--++++|.++=|.
T Consensus 136 --d~~~~~~aI~~nT-----kavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at-pyl-~rP~~hGADIVvHS~ 206 (426)
T COG2873 136 --DPENFEAAIDENT-----KAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT-PYL-CRPIEHGADIVVHSA 206 (426)
T ss_pred --CHHHHHHHhCccc-----ceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc-cee-cchhhcCCCEEEEee
Confidence 4789999999874 55543 322 3688999999987 6999999999998655 422 222347999999999
Q ss_pred ccCcCCCCCceEEEEEeCCCCccc
Q 021539 283 DNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 283 HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
-||+.|.-..+|..+|....+|-+
T Consensus 207 TK~igGhGt~iGG~iVD~G~FDw~ 230 (426)
T COG2873 207 TKYIGGHGTAIGGVIVDGGKFDWT 230 (426)
T ss_pred cccccCCccccceEEEeCCccccc
Confidence 996666556799999998887754
No 234
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.54 E-value=1.5e-06 Score=84.57 Aligned_cols=163 Identities=13% Similarity=0.018 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--------C-CCCCEEE-EccCcChHHHHHHHHhCCc-
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--------F-FKGNYYL-TIISEESDYIKGFAAQKES- 193 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--------~-~~Gd~Il-s~~eh~~~~~~~la~~~G~- 193 (311)
....+++++.++++++. + .++|++++|+|+..++.... + ..++.|+ ....+|...+..+....+.
T Consensus 72 ~~~~~~~~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~ 147 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGY--D--KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPK 147 (400)
T ss_pred CHHHHHHHHHHHhCCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcc
Confidence 45678899999999875 2 39999999999876655321 1 1234565 4444552222111111110
Q ss_pred ----------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEe
Q 021539 194 ----------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLL 256 (311)
Q Consensus 194 ----------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlv 256 (311)
.+..++. .++++|++.++.+ .+++|.+... .+|.+.| +++|.+ |+++|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~----~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~ 217 (400)
T PTZ00125 148 CYNNFGPFVPGFELVDY------NDVEALEKLLQDP----NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIV 217 (400)
T ss_pred hhccCCCCCCCceEeCC------CCHHHHHHHhCCC----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1112221 2678899888621 2567766333 6999998 888866 6999999999
Q ss_pred ccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 257 DATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 257 DAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|.+|. + |.. ..+.....+|++++| |++.|+-..+|+++.+++..+
T Consensus 218 Dev~~g~-g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~ 267 (400)
T PTZ00125 218 DEIQTGL-GRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVML 267 (400)
T ss_pred eccccCC-CccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHh
Confidence 99986 4 532 233344578999988 944432125899999876544
No 235
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.53 E-value=1.6e-06 Score=84.27 Aligned_cols=165 Identities=11% Similarity=0.091 Sum_probs=105.5
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.||+++ | +++++ +|+.|+|+++|+.++...+ ..+||.|+.. -.+. . ....++..|.++..+|.+
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~~al~~~~~~l-~~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~ 146 (388)
T PRK07366 71 LDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQEGTAHLPLAV-LNPGDFALLLDPGYP-S-HAGGVYLAGGQIYPMPLR 146 (388)
T ss_pred HHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcHHHHHHHHHHh-CCCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEEECC
Confidence 36888888877 4 55441 4999999999999999886 3689987532 2211 1 123345569999999986
Q ss_pred CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc---cCc-ccCC
Q 021539 202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GED-QLAL 270 (311)
Q Consensus 202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~-pldl 270 (311)
.++ -.++.+++.+.+.++ ++++.++ ++=||..++.+++.+ |+++++++++|-+-.-. +.. ...+
T Consensus 147 ~~~~~~~d~~~l~~~~~~~-----~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 221 (388)
T PRK07366 147 AENDFLPVFADIPTEVLAQ-----ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSI 221 (388)
T ss_pred CccCCCCCHHHHHHhhccc-----ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCCh
Confidence 432 245677777666543 3454443 335999999887633 57899999999764310 211 1122
Q ss_pred CCCC----CcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539 271 ALHR----PDLVLCTLDNNTHAQP-LKITCLLVRRKSF 303 (311)
Q Consensus 271 ~~l~----~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~ 303 (311)
..+. .-+++.|+=| .||.| -.+|.++..+++.
T Consensus 222 ~~~~~~~~~vi~~~SfSK-~~g~~GlRiG~~v~~~~li 258 (388)
T PRK07366 222 LQADPEKSVSIEFFTLSK-SYNMGGFRIGFAIGNAQLI 258 (388)
T ss_pred hhCCCCcccEEEEeeccc-ccCCcchhheehcCCHHHH
Confidence 2221 2267789999 88745 1388888766553
No 236
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.53 E-value=1.4e-06 Score=84.01 Aligned_cols=151 Identities=17% Similarity=0.067 Sum_probs=93.2
Q ss_pred HHHHHHHHHc-------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 130 QARNRALKHC-------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 130 ~aR~~IA~~L-------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
+.|+.+++++ |++++ +|++|+|+++++.++...+..++||.|+.. ..+.. ....++..|.++..++
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~-- 133 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPT--YEVGALLAGATPVAAD-- 133 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHH--HHHHHHhcCCEEeccC--
Confidence 4566666666 46555 599999999999998877645789998743 23321 2233455688776553
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccCcccCCCCC--
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQLALALH-- 273 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l-- 273 (311)
+ .+++. ..+ ++++.++ ++-||..+|.++ |.+ |+++|+++++|.+.......+-.+..+
T Consensus 134 --~----~~~l~---~~~-----~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 199 (357)
T TIGR03539 134 --D----PTELD---PVG-----PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP 199 (357)
T ss_pred --C----hhhcC---ccC-----ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence 1 12221 122 4555554 225999998665 433 688999999999875212111111111
Q ss_pred -------CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 274 -------RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 274 -------~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.--+++.|+-| .||.| | +|.++..++.
T Consensus 200 ~~~~~~~~~vi~~~S~SK-~~~~~-G~R~G~~i~~~~~ 235 (357)
T TIGR03539 200 RVCGGDHTGLLAVHSLSK-RSNLA-GYRAGFVAGDPAL 235 (357)
T ss_pred ccCCCccccEEEEecccc-ccCCC-ceeEEEEecCHHH
Confidence 12488889999 88744 6 6888765543
No 237
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.50 E-value=3.3e-06 Score=81.98 Aligned_cols=166 Identities=10% Similarity=0.007 Sum_probs=106.0
Q ss_pred HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC-EEEEc-cCcChHHHHHHHHhCCcEEEEE
Q 021539 129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGN-YYLTI-ISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd-~Ils~-~eh~~~~~~~la~~~G~~V~~v 198 (311)
.+.|+.||++++ ++++ +|++|+|+++++..++.++. .+|+ .|+.. -.+ ......++..|.++..+
T Consensus 69 ~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~y--~~~~~~~~~~g~~~~~~ 143 (374)
T PRK02610 69 EALKQAIAEYVNESAAGSSQITPA--NISVGNGSDELIRSLLIATC-LGGEGSILVAEPTF--SMYGILAQTLGIPVVRV 143 (374)
T ss_pred HHHHHHHHHHhCccccccCCCCHH--HEEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCCh--HHHHHHHHHcCCEEEEe
Confidence 478999999998 6655 49999999999987666543 2454 56422 111 11234456679999999
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHH--HCCcEEEecccccCc-cCccc-CCCC
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAH--RNAWHVLLDATGLVF-GEDQL-ALAL 272 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~--~~g~~vlvDAaQsv~-G~~pl-dl~~ 272 (311)
|.+..+..++.++|+++++... ..++++|.++ ++=||+.++.+++.++. .+++++++|-+-.-. +...+ .+..
T Consensus 144 ~~~~~~~~~d~~~l~~~~~~~~-~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~ 222 (374)
T PRK02610 144 GRDPETFEIDLAAAQSAIEQTQ-NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQ 222 (374)
T ss_pred cCCcccCCCCHHHHHHHHHhhc-CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhc
Confidence 8764334688999988886300 0124555443 33599999998886542 248999999986420 21111 1221
Q ss_pred CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
..-=+++.|+=| .||.| | +|+++..+++
T Consensus 223 ~~~~ivi~SfSK-~~g~~-GlRiG~~v~~~~l 252 (374)
T PRK02610 223 HPNWVILRTFSK-AFRLA-AHRVGYAIGHPEL 252 (374)
T ss_pred CCCEEEEEecch-hccCc-ccceeeeecCHHH
Confidence 111267789999 88744 5 8988876544
No 238
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.49 E-value=1.4e-06 Score=85.97 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=99.3
Q ss_pred HHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH----HHHHHHHhCCcEEEEEeCCCCCcccCHHHH
Q 021539 137 KHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD----YIKGFAAQKESKVIAAPETWLDLRIKGSQL 212 (311)
Q Consensus 137 ~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~----~~~~la~~~G~~V~~vp~~~~~g~id~~~L 212 (311)
.+++++..+ .++.+.|.+.|+-+++.++. .+.+++...+|..+ .+....+.-|+++..+.- ..+....++
T Consensus 76 ~~~~~~~ae-a~~ivnnn~aAVll~~~al~--~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---tn~t~~~d~ 149 (395)
T COG1921 76 LLCGLTGAE-AAAIVNNNAAAVLLTLNALA--EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---TNRTHLKDY 149 (395)
T ss_pred HHhcccchh-heeeECCcHHHHHHHHhhhc--cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---cCcCCHHHH
Confidence 345554222 47788888888887777764 34555433332211 233334445887765543 335678889
Q ss_pred HhhhhccCCCCCceEEE-Eecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cccCCC---CCCCcEEEEcccc
Q 021539 213 SQNFRRKCKYTPKGLFS-YPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQLALA---LHRPDLVLCTLDN 284 (311)
Q Consensus 213 ~~~l~~~~~~~~t~LVs-~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pldl~---~l~~Dfl~~S~HK 284 (311)
+.++.+++ ..++- .+++ ++| -.+.+++.+ +|++|+++++|++... -- ..-++. +.++|.++||+||
T Consensus 150 ~~AIne~t----a~llkV~s~~~~f~~-~l~~~~l~~ia~~~~lpvivD~aSg~-~v~~e~~l~~~la~GaDLV~~SgdK 223 (395)
T COG1921 150 ELAINENT----ALLLKVHSSNYGFTG-MLSEEELVEIAHEKGLPVIVDLASGA-LVDKEPDLREALALGADLVSFSGDK 223 (395)
T ss_pred HHHhccCC----eeEEEEeeccccccc-cccHHHHHHHHHHcCCCEEEecCCcc-ccccccchhHHHhcCCCEEEEecch
Confidence 99998874 22332 2333 244 356777755 7999999999998755 21 122333 2689999999999
Q ss_pred CcCCCCCceEEEEEeCCCCcc
Q 021539 285 NTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 285 ~l~G~P~GiG~L~vr~~~~~~ 305 (311)
++|+|+ .|+++-|+++++.
T Consensus 224 -llgGPq-aGii~GkKelI~~ 242 (395)
T COG1921 224 -LLGGPQ-AGIIVGKKELIEK 242 (395)
T ss_pred -hcCCCc-cceEechHHHHHH
Confidence 998897 8999988877653
No 239
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.49 E-value=2.3e-06 Score=92.55 Aligned_cols=158 Identities=12% Similarity=0.032 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEE-EccCcC--hHHHHHHHHhCCcEEEEEeCCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYL-TIISEE--SDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+-+-+.-|+++.|.+..+ .-+..++|.+.+.++.++... ++++|+ +...|+ ...++..++..|++|+.++.
T Consensus 111 l~e~Qt~i~eLtGm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~-- 186 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC-- 186 (939)
T ss_pred HHHHHHHHHHHHCCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH--
Confidence 447888999999997544 677889998877666554322 335664 566677 34566566777999887643
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEec-ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV-VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
++|++.+ + +..|.++. +..|.+.++++|.+ +|++|+++++++-+.. .....+-.++++|+++.
T Consensus 187 -------~~l~~~~--~-----~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~a-l~ll~~Pge~GaDi~vg 251 (939)
T TIGR00461 187 -------SDIKKAV--D-----VFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMA-LTLLTPPGHYGADIVLG 251 (939)
T ss_pred -------HHHhhcC--C-----EEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHH-hCCcCCHHHcCCcEEee
Confidence 2344443 1 22222222 26899999999965 6999999999988888 77888888899999988
Q ss_pred ccccC----cCCCCCceEEEEEeCCCCcc
Q 021539 281 TLDNN----THAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 281 S~HK~----l~G~P~GiG~L~vr~~~~~~ 305 (311)
++++| -||+| +.|++.+|++....
T Consensus 252 ~~q~fg~p~g~GGP-~aG~~a~~~~l~r~ 279 (939)
T TIGR00461 252 SSQRFGVPMGYGGP-HAAFFAVKDEYNRK 279 (939)
T ss_pred CCCccCCCCCCCCC-ceeeeeecHhhHhh
Confidence 88885 24557 69999999876554
No 240
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.48 E-value=4.2e-06 Score=81.63 Aligned_cols=164 Identities=15% Similarity=0.071 Sum_probs=105.8
Q ss_pred HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCC---CCEEEEc-cCcChHHHHHHHHhCCcEEEEE
Q 021539 130 QARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFK---GNYYLTI-ISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 130 ~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~---Gd~Ils~-~eh~~~~~~~la~~~G~~V~~v 198 (311)
+.|+.||+++ | ++++ .+|++|+|+++++.+++..+. .+ |+.|+.. -... .....++..|+++..+
T Consensus 69 ~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~v 144 (396)
T PRK09147 69 ALREAIAAWLERRYGLPALDPA-TQVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPNPFYQ--IYEGAALLAGAEPYFL 144 (396)
T ss_pred HHHHHHHHHHHHHhCCCcCCcc-ceEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcCCCcc--chHHHHHhcCCEEEEe
Confidence 5777888765 6 4433 259999999999999988873 55 7777633 1211 1223345569999999
Q ss_pred eCCCCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH---H-HHHCCcEEEecccccCc--cC--cc
Q 021539 199 PETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF--GE--DQ 267 (311)
Q Consensus 199 p~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~--G~--~p 267 (311)
|.+.++ ..++.+++++.+.++ ++++.++ ++=||.+++.+++. + |+++++++++|=+-.-. .. .+
T Consensus 145 p~~~~~~~~~d~~~l~~~~~~~-----~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 219 (396)
T PRK09147 145 NCDPANNFAPDFDAVPAEVWAR-----TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPP 219 (396)
T ss_pred ccCccccCccCHHHHHHHHhhc-----cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCC
Confidence 986422 357889998777654 3454443 33599999877653 2 57899999999986531 11 11
Q ss_pred cC-C---CCCCCc-----EEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539 268 LA-L---ALHRPD-----LVLCTLDNNTHAQP-LKITCLLVRRKSF 303 (311)
Q Consensus 268 ld-l---~~l~~D-----fl~~S~HK~l~G~P-~GiG~L~vr~~~~ 303 (311)
.. + ...+.| +++.|+=| .||.| ..+|+++..+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~~GlRiG~~~~~~~l~ 264 (396)
T PRK09147 220 LGLLEAAAELGRDDFKRLVVFHSLSK-RSNVPGLRSGFVAGDAALL 264 (396)
T ss_pred chhhhhccccCccccccEEEEecccc-ccCCccceeeeecCCHHHH
Confidence 11 1 011222 88899999 77745 2388888766543
No 241
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.48 E-value=3.8e-06 Score=82.29 Aligned_cols=167 Identities=11% Similarity=0.046 Sum_probs=103.0
Q ss_pred HHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539 130 QARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 130 ~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
..|+.||+++ |.+.+.. +|++|+|+++|+.+++..+. .+||.|+.. -.+. . ....++..|.+++.+|.+.+
T Consensus 75 ~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~~~ 151 (403)
T PRK08636 75 KLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDPAYP-I-HSQAFILAGGNVHKMPLEYN 151 (403)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEEecccc
Confidence 5777888876 6432222 59999999999999999874 689988632 2222 1 22334556999999887521
Q ss_pred -CcccCHHH----HHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccC
Q 021539 204 -DLRIKGSQ----LSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLA 269 (311)
Q Consensus 204 -~g~id~~~----L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pld 269 (311)
+..++.+. ++++++... .+++++.++ ++=||..+|.+++ .+ |++++++++.|-+-.-. +.....
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~--~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~ 229 (403)
T PRK08636 152 EDFELDEDQFFENLEKALRESS--PKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS 229 (403)
T ss_pred ccCccChhhhhhHHHHHHhhcc--CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC
Confidence 23567664 455554311 124444443 4469999998765 23 58899999999875420 111122
Q ss_pred CCCC----CCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539 270 LALH----RPDLVLCTLDNNTHAQPL-KITCLLVRRKS 302 (311)
Q Consensus 270 l~~l----~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~ 302 (311)
+..+ +.-+++.|+=| .||.|- .+|+++..+++
T Consensus 230 ~~~~~~~~~~~i~~~S~SK-~~~~~GlRiG~iv~~~~l 266 (403)
T PRK08636 230 ILEVEGAKDVAVESYTLSK-SYNMAGWRVGFVVGNKKL 266 (403)
T ss_pred hhcCCCccccEEEEEeccc-ccCCccceeeeeeCCHHH
Confidence 2222 22345679999 876441 38888766544
No 242
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.46 E-value=2.7e-06 Score=82.98 Aligned_cols=161 Identities=16% Similarity=0.087 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChH--HHHHHHHh---------CCcE
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESD--YIKGFAAQ---------KESK 194 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~--~~~~la~~---------~G~~ 194 (311)
..+..+.++++++.+ +...|+||+|++||+..++..... .| +.+++. ..+|.. ....+... .+..
T Consensus 87 ~~~la~~l~~~~~~~-~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 164 (398)
T PRK03244 87 QIALAERLVELLGAP-EGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGG 164 (398)
T ss_pred HHHHHHHHHHhCCCC-CCCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCC
Confidence 356777888888853 212599999999999988764322 33 345432 344422 11111100 0112
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ 267 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p 267 (311)
+..+|. .+.+.|++.+.++ +++|.+ +.+ .+|.+.| +++|.+ |+++|+++++|-+|+-.|..-
T Consensus 165 ~~~~~~------~d~~~l~~~~~~~-----~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g 233 (398)
T PRK03244 165 VEHVPY------GDVDALAAAVDDD-----TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG 233 (398)
T ss_pred ceEeCC------CCHHHHHHhhcCC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc
Confidence 233332 1567888887543 455554 333 5899998 778865 699999999999996213221
Q ss_pred --c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 268 --L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 268 --l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+ ......+|+++|| | .+|+.-.+|+++.+++..+
T Consensus 234 ~~~~~~~~~~~pDi~t~s--K-~l~~G~~ig~~~~~~~~~~ 271 (398)
T PRK03244 234 AWFAHQHDGVTPDVVTLA--K-GLGGGLPIGACLAFGPAAD 271 (398)
T ss_pred hHHhhhhhCCCCCEEEEc--h-hhhCCcccEEEEEcHHHHh
Confidence 2 3334569998776 9 5552234899999876544
No 243
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.46 E-value=2.2e-06 Score=82.55 Aligned_cols=151 Identities=16% Similarity=0.086 Sum_probs=94.1
Q ss_pred HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC
Q 021539 130 QARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 130 ~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
+.|+.||+++ | ++++ +|++|+|+++++.++...+...+|+.|+... .+. . ....++..|+++..++.
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~-~-~~~~~~~~g~~~~~~~~- 140 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYP-T-YEVGARLAGATVVRADS- 140 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcc-c-HHHHHHhcCCEEEecCC-
Confidence 5677788877 4 5455 4999999999999887766457899886432 332 1 22233445888766542
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCCCC---
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLALAL--- 272 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl~~--- 272 (311)
.+++.+ .+ +++|.+. ++=||.+++.+++ .+ |+++|+++++|.+..-.....-.+..
T Consensus 141 -------~~~l~~---~~-----~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 205 (364)
T PRK07865 141 -------LTELGP---QR-----PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDP 205 (364)
T ss_pred -------hhhCCc---cc-----ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccc
Confidence 122221 22 3555543 2259999997654 33 58899999999997631111101111
Q ss_pred ------CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 273 ------HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 273 ------l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.+-.+++.|+-| .||.| | +|+++..++.
T Consensus 206 ~~~~~~~~~~i~~~S~SK-~~~~~-GlRiG~i~~~~~~ 241 (364)
T PRK07865 206 RVCGGDHTGLLAVHSLSK-QSNLA-GYRAGFVAGDPAL 241 (364)
T ss_pred cccCCccceEEEEeechh-ccCCC-ceeeEEEecCHHH
Confidence 122488999999 88744 5 8888766544
No 244
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.41 E-value=7.4e-06 Score=80.99 Aligned_cols=159 Identities=6% Similarity=-0.006 Sum_probs=107.1
Q ss_pred HHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 130 QARNRALKHCGL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 130 ~aR~~IA~~Lga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
+.|+.++++++. .++ .+|+.|+|+++++.+++..+. .+||.|+.. -.+. . ....++..|+++..+|.+. ++
T Consensus 125 ~lr~~ia~~~~~~~~~~-~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~~-~g- 198 (431)
T PRK15481 125 ELHAWAARWLRDDCPVA-FEIDLTSGAIDAIERLLCAHL-LPGDSVAVEDPCFL-S-SINMLRYAGFSASPVSVDA-EG- 198 (431)
T ss_pred HHHHHHHHHHhhccCCc-CeEEEecCcHHHHHHHHHHhC-CCCCEEEEeCCCcH-H-HHHHHHHcCCeEEeeccCC-CC-
Confidence 578888888773 322 259999999999999999873 689987632 2221 2 2344566799999999864 44
Q ss_pred cCHHHHHhhhhccCCCCCceEEEE-e-cccccchhcHH---HHHH-HHHC-CcEEEecccccCc---cCcc-cCCCCCCC
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSY-P-VVVNGTRYSMH---WISE-AHRN-AWHVLLDATGLVF---GEDQ-LALALHRP 275 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~-~-~~~tG~i~Pi~---~I~~-a~~~-g~~vlvDAaQsv~---G~~p-ldl~~l~~ 275 (311)
++.+.|++++++++ +.++.+ + ++=||+.++.+ +|.+ |+++ +++++.|-+-.-. +..+ +.. ..+-
T Consensus 199 ~~~~~l~~~~~~~~----k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~ 273 (431)
T PRK15481 199 MQPEKLERALAQGA----RAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ-TTQR 273 (431)
T ss_pred CCHHHHHHHHhcCC----CEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC-CCCC
Confidence 78999998887542 233433 2 33599999997 5544 5777 9999999765420 1111 111 1123
Q ss_pred cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
-+++.|+-| .|| | | +|+++..+++
T Consensus 274 vi~~~SfSK-~~~-~-GlRiG~~i~~~~~ 299 (431)
T PRK15481 274 WALIRSVSK-ALG-P-DLRLAFVASDSAT 299 (431)
T ss_pred EEEEeeecc-ccC-C-CceeEEEeCCHHH
Confidence 488899999 998 7 5 7888776543
No 245
>PRK06855 aminotransferase; Validated
Probab=98.40 E-value=1.1e-05 Score=80.25 Aligned_cols=161 Identities=12% Similarity=0.090 Sum_probs=102.1
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.||+++ | ++++ +|++|+|+++|+.+++. + ..+||.|+.. ..++. .........|+++..+|.+
T Consensus 76 ~~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~-~~~~~~~~~g~~~v~v~~~ 150 (433)
T PRK06855 76 LETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYST-HSSAEAAHAGYPPVTYRLD 150 (433)
T ss_pred HHHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCch-HHHHHHHhcCCeEEEEecc
Confidence 47888888887 3 4554 49999999999998874 4 4689988632 22221 1111112347888888876
Q ss_pred CCC-cccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
..+ -.++.++|++.++... +++++.+ +++=||.++|.+++. + |++++++++.|-+-.-. +.....+.
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~---~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~ 227 (433)
T PRK06855 151 PENNWYPDLDDLENKVKYNP---SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLS 227 (433)
T ss_pred cccCCCCCHHHHHHHHhcCC---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHH
Confidence 322 2478999998886321 1333332 344599999987653 2 57899999999986421 21122222
Q ss_pred CC---CCcEEEEccccCcCCCCC-ceEEEEE
Q 021539 272 LH---RPDLVLCTLDNNTHAQPL-KITCLLV 298 (311)
Q Consensus 272 ~l---~~Dfl~~S~HK~l~G~P~-GiG~L~v 298 (311)
.+ ..-+++.|+=| .|+.|- -+|++++
T Consensus 228 ~~~~~~~~I~~~S~SK-~~~~pGlRiG~ii~ 257 (433)
T PRK06855 228 EVIGDVPGIALKGISK-ELPWPGSRCGWIEV 257 (433)
T ss_pred HHcCcCCeEEEecCcc-ccCCCcceEEEEEE
Confidence 11 12378899999 776451 3898887
No 246
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.40 E-value=4.3e-06 Score=80.51 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=101.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc-
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR- 206 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~- 206 (311)
.+.|+.||+++++++++ |++|+|+++++.+++..+. +|+.|+.. -.+ .. ....++..|.++..+|.+..++.
T Consensus 60 ~~Lr~aia~~~~v~~~~--I~it~G~~~~i~~~~~~l~--~g~~vlv~~P~y-~~-~~~~~~~~g~~~~~v~~~~~~~~~ 133 (360)
T PRK07392 60 RELRLALAQHHQLPPEW--ILPGNGAAELLTWAGRELA--QLRAVYLITPAF-GD-YRRALRAFGATVKELPLPLDQPSP 133 (360)
T ss_pred HHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHhC--CCCeEEEECCCc-HH-HHHHHHHcCCeEEEEecccccCCc
Confidence 37899999999998765 9999999999999988763 56776532 121 11 23445567999999998643322
Q ss_pred ---cCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCc---cCcc--cC-CCCCC
Q 021539 207 ---IKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF---GEDQ--LA-LALHR 274 (311)
Q Consensus 207 ---id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~---G~~p--ld-l~~l~ 274 (311)
.+.+++.+... + ++++.+ +++=||..++-++|.+ ++++++ +++|-+-.-. +..+ ++ +....
T Consensus 134 ~~~~~~~~~~~~~~-~-----~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~ 206 (360)
T PRK07392 134 GLTLRLQTLPPQLT-P-----NDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP 206 (360)
T ss_pred ccccCHHHHHHhcc-C-----CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC
Confidence 34444443322 1 344443 3446999999999866 577776 6669875420 1100 11 11111
Q ss_pred CcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539 275 PDLVLCTLDNNTHAQP-LKITCLLVRRKS 302 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~ 302 (311)
-=+++.|+=| .||.| -.+|+++..++.
T Consensus 207 ~vi~i~S~SK-~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 207 NLIILRSLTK-FYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CEEEEEechh-hhcCCchheeeeeCCHHH
Confidence 1267789999 88744 248988876544
No 247
>PRK07505 hypothetical protein; Provisional
Probab=98.38 E-value=2.1e-05 Score=77.09 Aligned_cols=158 Identities=12% Similarity=0.066 Sum_probs=92.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh----cCCCCCCC--EEEEc-cCcChHH-HHHHHHhCC
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE----SYPFFKGN--YYLTI-ISEESDY-IKGFAAQKE 192 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~----s~~~~~Gd--~Ils~-~eh~~~~-~~~la~~~G 192 (311)
+.......++.++.++++++. + .++|++| ++|+..++. ++ +.+|+ .|+.. ..|.+.. ..... +.+
T Consensus 86 ~~~~~~~~~~l~~~la~~~~~--~--~~~~~sG-~~a~~~ai~~~~~~~-~~~~~~~vi~~~~~~H~s~~~~~~~~-~~~ 158 (402)
T PRK07505 86 TRVRSQILKDLEEALSELFGA--S--VLTFTSC-SAAHLGILPLLASGH-LTGGVPPHMVFDKNAHASLNILKGIC-ADE 158 (402)
T ss_pred hhhhhHHHHHHHHHHHHHhCC--C--EEEECCh-HHHHHHHHHHHHhcc-cCCCCCCEEEEchhhhHhHHhhhhhh-hcC
Confidence 334566778999999999987 3 2556655 556543332 22 22232 33333 3333211 12222 235
Q ss_pred cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc---
Q 021539 193 SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--- 267 (311)
Q Consensus 193 ~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--- 267 (311)
.++..+|.+ |.++|++++++++ +.++.+ +.+.+|.+.|+++|.+ |+++|+++++|.+|+.+|..+
T Consensus 159 ~~v~~~~~~------d~~~l~~~~~~~~----~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~ 228 (402)
T PRK07505 159 TEVETIDHN------DLDALEDICKTNK----TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGE 228 (402)
T ss_pred CeEEEeCCC------CHHHHHHHHhcCC----CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCC
Confidence 677777753 5678888886542 234433 3346899999999976 689999999999996511111
Q ss_pred -cC---CC--CCCCcEEEEccccCcCCCCCceEEEEE
Q 021539 268 -LA---LA--LHRPDLVLCTLDNNTHAQPLKITCLLV 298 (311)
Q Consensus 268 -ld---l~--~l~~Dfl~~S~HK~l~G~P~GiG~L~v 298 (311)
.. +. .-+..+++.|+=| .||.+ | |++.+
T Consensus 229 ~~~~~~~~~~~~d~~i~~~s~sK-~~~~~-G-g~~~~ 262 (402)
T PRK07505 229 GYVRSELDYRLNERTIIAASLGK-AFGAS-G-GVIML 262 (402)
T ss_pred chHHHHcCCCCCCCeEEEEechh-hhhcc-C-eEEEe
Confidence 11 11 1123466678999 77733 4 66554
No 248
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.38 E-value=5.4e-06 Score=79.73 Aligned_cols=166 Identities=12% Similarity=0.091 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-C----CCCEEEEcc-CcChH--HHHHHHHhCCcEE
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-F----KGNYYLTII-SEESD--YIKGFAAQKESKV 195 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-~----~Gd~Ils~~-eh~~~--~~~~la~~~G~~V 195 (311)
.....+..+++++++|.+ .++|+.|+++|+.+++.... + . +++.|++.. ..|.. .............
T Consensus 68 ~~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 68 TEPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred CHHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 344568899999999873 39999999999987766431 1 1 257776432 33311 1111100000000
Q ss_pred EEEeCCCCCccc----CHHHHHhhhhccCCCCCceEEEEecc--cccch-hc---HHHHHH-HHHCCcEEEeccccc-Cc
Q 021539 196 IAAPETWLDLRI----KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR-YS---MHWISE-AHRNAWHVLLDATGL-VF 263 (311)
Q Consensus 196 ~~vp~~~~~g~i----d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i-~P---i~~I~~-a~~~g~~vlvDAaQs-v~ 263 (311)
...+... +-.. +.+.|++.+.++ +++|.+... .+|.+ .+ +++|.+ |+++|+++++|.++. +
T Consensus 144 ~~~~~~~-~~~~~~~~d~~~l~~~~~~~-----~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~- 216 (379)
T TIGR00707 144 GFEPLVP-GFSYAPYNDIESLKKAIDDE-----TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGI- 216 (379)
T ss_pred cCCCCCC-CceeeCCCCHHHHHHHhhhC-----eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC-
Confidence 0111111 1111 678888888654 456666544 35654 33 566654 688999999999997 4
Q ss_pred cCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 264 GED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 264 G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|.. +++.....+|+++| .| .+|....+|+++.+++..+
T Consensus 217 ~~~g~~~~~~~~~~~~d~~t~--sK-~~~~G~riG~~~~~~~~~~ 258 (379)
T TIGR00707 217 GRTGKFFAYEHYGIEPDIITL--AK-GLGGGVPIGATLAKEEVAE 258 (379)
T ss_pred CccchhhhHHhcCCCCCEEEE--cc-cccCCcccEEEEEcHHHHh
Confidence 542 12222346787765 69 6663345999998876644
No 249
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.36 E-value=8.8e-06 Score=86.09 Aligned_cols=170 Identities=12% Similarity=0.081 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~ 204 (311)
..+.+|.+.+|+.+|++. .-..|.|+|.|+..++.+. ..+||.|+..-.-|-+.......-.|+..++++...+ .
T Consensus 174 G~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred hHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence 345689999999999963 2556789999988888876 4789999865543423333211224888888764431 2
Q ss_pred ---cccCHHH-----HHhhhhccC-C----CCCceEEEEecc-cccchhcHHHHHH-H-HHCCcEEEecccccCccCccc
Q 021539 205 ---LRIKGSQ-----LSQNFRRKC-K----YTPKGLFSYPVV-VNGTRYSMHWISE-A-HRNAWHVLLDATGLVFGEDQL 268 (311)
Q Consensus 205 ---g~id~~~-----L~~~l~~~~-~----~~~t~LVs~~~~-~tG~i~Pi~~I~~-a-~~~g~~vlvDAaQsv~G~~pl 268 (311)
|.|+.++ |++.|+... + .++.+++.++.- --|+..++++|.+ + |..+ ++|+|-||.. |..+
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga--h~~F 326 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG--YEQF 326 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh--hhcc
Confidence 3356544 888887541 1 012356665543 4799999999965 3 7777 9999998873 4322
Q ss_pred C-----C----CCCCCc----EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 269 A-----L----ALHRPD----LVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 269 d-----l----~~l~~D----fl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
. + -++++| |++-|.|| ++++-+....|-++.+.+
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHK-tL~alTQaS~LHvk~~~i 373 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHK-QQAGFSQTSQIHKKDNHI 373 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhh-cchhhhhHhhhhcCCccc
Confidence 1 1 135899 99999999 776677777887876543
No 250
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.34 E-value=1.4e-05 Score=79.13 Aligned_cols=156 Identities=14% Similarity=0.105 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..++.-+++|+|+|.+. -++|++|.+ |+..++.++. +++|.|++.---|.+.+ .-++..++++...+-
T Consensus 85 ~h~~LE~~lA~f~g~e~---al~f~SGy~-AN~~~i~~l~-~~~dli~~D~lnHASii-dG~rls~a~~~~f~H------ 152 (388)
T COG0156 85 LHVELEEELADFLGAEA---ALLFSSGFV-ANLGLLSALL-KKGDLIFSDELNHASII-DGIRLSRAEVRRFKH------ 152 (388)
T ss_pred HHHHHHHHHHHHhCCCc---EEEEcccch-hHHHHHHHhc-CCCcEEEEechhhhhHH-HHHHhCCCcEEEecC------
Confidence 34578888999999953 499999987 4455555663 56788876544443333 333445677666543
Q ss_pred cCHHHHHhhhhccCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCCCC
Q 021539 207 IKGSQLSQNFRRKCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALALH 273 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~~l 273 (311)
.|.++|++.+++..... ...+|++..+ ..|.+-|+.+|.+ +++++++++||=||++ |..-= .+..-
T Consensus 153 nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~-Gv~G~~GrG~~e~~g~~~~ 231 (388)
T COG0156 153 NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAV-GVLGPNGRGLAEHFGLEPE 231 (388)
T ss_pred CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccc-cccCCCCccHHHHhCCCCc
Confidence 25688999997621111 2467887777 3899999999966 5899999999999998 76542 23334
Q ss_pred CCcEEEEccccCcCCCCCceEEEEEe
Q 021539 274 RPDLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
.+|+++.++-| -|| +.|+.+.-
T Consensus 232 ~vdi~~gTlsK-AlG---s~Gg~v~g 253 (388)
T COG0156 232 EVDIIVGTLGK-ALG---SSGGYIAG 253 (388)
T ss_pred cceEEEEEchh-hhc---ccCceeeC
Confidence 56999999999 777 56766654
No 251
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.34 E-value=2.5e-07 Score=90.41 Aligned_cols=160 Identities=16% Similarity=0.186 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH-----HHHHHHHhCCcEEEEEeCCCC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD-----YIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~-----~~~~la~~~G~~V~~vp~~~~ 203 (311)
..+.+.++.+.||. + .+.+.|...|+.+++.++. +|++|+...+|-.+ .+-..-+..|++++.|-..
T Consensus 50 ~~v~~ll~~ltgAe--a--A~VvNnnaAAv~L~l~~la--~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt-- 121 (367)
T PF03841_consen 50 AHVEELLCELTGAE--A--ALVVNNNAAAVLLALNTLA--KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT-- 121 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc--c--ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc--
Confidence 35677788899984 2 5567777788888887764 56666533443311 1222233457766555432
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEec--c--cccc--hhcHHHHHH-HHHCCcEEEecccccCc--------cCccc
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--V--VNGT--RYSMHWISE-AHRNAWHVLLDATGLVF--------GEDQL 268 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~--~tG~--i~Pi~~I~~-a~~~g~~vlvDAaQsv~--------G~~pl 268 (311)
+ +...++.++++.++ |.++-.-| + ..|. -.|++++.+ +|++++++++|+...+. +..|-
T Consensus 122 N-~t~~~Dye~AI~e~-----Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~ 195 (367)
T PF03841_consen 122 N-RTHLSDYEKAITEN-----TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPT 195 (367)
T ss_dssp ---------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-------
T ss_pred c-cccccccccccccc-----ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccH
Confidence 1 34567788999876 34443322 2 2342 247788865 69999999999987210 11111
Q ss_pred --CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 269 --ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 269 --dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+.-+.++|.++||+.| ++|+|+ .|+++-|+++++
T Consensus 196 v~~~~~~GaDlV~fSGdK-lLGGPQ-aGiI~Gkk~lI~ 231 (367)
T PF03841_consen 196 VQEYLAAGADLVTFSGDK-LLGGPQ-AGIIVGKKELIE 231 (367)
T ss_dssp ---CCCCT-SEEEEETTS-SSSS-S--EEEEEEHHHHH
T ss_pred HHHHhhcCCCEEEEECCC-cCCCCC-eEEEEeCHHHHH
Confidence 1223689999999999 999898 699999987765
No 252
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.30 E-value=1.7e-05 Score=79.98 Aligned_cols=162 Identities=14% Similarity=0.088 Sum_probs=107.9
Q ss_pred HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539 130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD 204 (311)
Q Consensus 130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~ 204 (311)
..|+.|++++ |...+..+|++|+|+++|+++++..+. .+||.|+.. ..++ .+....+..|+++..||+|. +
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~-~pGd~v~vE~PtY~--~~~~~~~~~g~~~~~vp~d~-~ 211 (459)
T COG1167 136 ELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL-DPGDTVLVEDPTYP--GALQALEALGARVIPVPVDE-D 211 (459)
T ss_pred HHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCcH--HHHHHHHHcCCcEEecCCCC-C
Confidence 4555555444 443333369999999999999999874 589998632 2222 23445566799999999985 5
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEE-e-cc-cccchhcHHH---H-HHHHHCCcEEEecccccCc---cCcccCCCC--
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYSMHW---I-SEAHRNAWHVLLDATGLVF---GEDQLALAL-- 272 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~Pi~~---I-~~a~~~g~~vlvDAaQsv~---G~~pldl~~-- 272 (311)
| ++++.|++.++.. +.+++-+ + ++ =||..++.+. | ..|++++++++=|-.=+-. +.-+.++..
T Consensus 212 G-~~~e~le~~~~~~----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld 286 (459)
T COG1167 212 G-IDPEALEEALAQW----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD 286 (459)
T ss_pred C-CCHHHHHHHHhhc----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence 5 7899999998753 1345544 3 23 3999999974 4 3468999999998865431 111111222
Q ss_pred -CCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539 273 -HRPDLVLCTLDNNTHAQPL-KITCLLVRRKS 302 (311)
Q Consensus 273 -l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~ 302 (311)
.+==+++.|+=| .+. |. .+|.+++.+++
T Consensus 287 ~~~rViy~gSFSK-~l~-PglRlG~vv~p~~~ 316 (459)
T COG1167 287 APGRVIYLGSFSK-TLA-PGLRLGYVVAPPEL 316 (459)
T ss_pred CCCCEEEEeeehh-hcc-cccceeeeeCCHHH
Confidence 244589999999 666 53 68888877554
No 253
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.30 E-value=6.4e-06 Score=82.65 Aligned_cols=165 Identities=9% Similarity=0.058 Sum_probs=104.4
Q ss_pred HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEe
Q 021539 129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAP 199 (311)
Q Consensus 129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp 199 (311)
.+.|+.||++++ ++++ +|++|+|+|+|+.+++..+ ..+||.|+... .+. .....+..+.|++++.++
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~-~f~~~~~~~~g~~vv~v~ 173 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYP-GFDRDLRWRTGVKIVPIH 173 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCc-chHHHHHhcCCcEEEEEe
Confidence 368888888875 4444 5999999999999998887 36899886322 222 111222224588888888
Q ss_pred CCCCC-cccCHHHHHhhhhccC-CCCCceEEEE--ecccccchhcHHHHH----HHHHCCcEEEecccccCc--cCcc-c
Q 021539 200 ETWLD-LRIKGSQLSQNFRRKC-KYTPKGLFSY--PVVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVF--GEDQ-L 268 (311)
Q Consensus 200 ~~~~~-g~id~~~L~~~l~~~~-~~~~t~LVs~--~~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~--G~~p-l 268 (311)
.+..+ ..++.+.++++++... ...+++++.+ +++=+|..+|-+++. .|+++++++++|-+-+.. +..+ .
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~ 253 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFV 253 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcc
Confidence 76432 2478899988886410 0112444443 344699999976553 357899999999986530 2111 1
Q ss_pred CCC----CCC----Cc--EEEEccccCcCCCCCc--eEEEEEe
Q 021539 269 ALA----LHR----PD--LVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 269 dl~----~l~----~D--fl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
.+. ..+ .+ .++-|.=| -||.| | +|+++..
T Consensus 254 S~~s~~~~~~~~~~~~~v~vi~s~SK-~fg~~-GlRvG~ivs~ 294 (447)
T PLN02607 254 SVAEIVEARGYKGVAERVHIVYSLSK-DLGLP-GFRVGTIYSY 294 (447)
T ss_pred cHHHHHhhcCCCCCcCcEEEEEcchh-cCCCC-cceEEEEEEc
Confidence 111 111 12 46678899 88744 5 7999974
No 254
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.27 E-value=1.8e-05 Score=77.46 Aligned_cols=161 Identities=12% Similarity=0.079 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-------CCC-CEEEEc-cCcChH--HHHHHHHh---
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-------FKG-NYYLTI-ISEESD--YIKGFAAQ--- 190 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-------~~G-d~Ils~-~eh~~~--~~~~la~~--- 190 (311)
....+.-++++++++. + .+.|++++|||+..++... .+ .+| +.|++. ...|.. ....+...
T Consensus 82 ~~~~~l~~~l~~~~~~--~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 82 DQLGPWYEKVAKLTGK--D--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred HHHHHHHHHHHhcCCC--C--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 3444566777777764 2 4999999999987654422 11 123 456543 344421 11111110
Q ss_pred -CCc-----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEec
Q 021539 191 -KES-----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLD 257 (311)
Q Consensus 191 -~G~-----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvD 257 (311)
.+. .+..+|.+ +.++|++.++++ +++|.+... .+|.+.| +++|.+ |+++|+++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~------d~~~l~~~i~~~-----~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 226 (396)
T PRK04073 158 KRGFGPMLPGIKKIPYG------DLEALKAAITPN-----TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD 226 (396)
T ss_pred ccCCCCCCCCceEeCCC------CHHHHHHhcccC-----eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 011 12233322 567888888654 466666443 5899988 677865 68999999999
Q ss_pred ccccCccCc----ccCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539 258 ATGLVFGED----QLALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD 304 (311)
Q Consensus 258 AaQsv~G~~----pldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~ 304 (311)
-+|.-.|.. ..+.....+|++++| | -+|++ --+|+++.++++.+
T Consensus 227 Ev~~g~g~~g~~~~~~~~~~~pdi~~~s--K-~lg~gg~~ig~~~~~~~i~~ 275 (396)
T PRK04073 227 EIQTGLGRTGKLFACDWDNVTPDMYILG--K-ALGGGVFPISCVAANRDILG 275 (396)
T ss_pred cchhCCCcCcHHHHhhhcCCCCCEEEec--c-cccCCCCcceEEEEcHHHHh
Confidence 999921532 224445579999886 9 55543 23899998876544
No 255
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.26 E-value=1.4e-05 Score=78.38 Aligned_cols=158 Identities=12% Similarity=0.037 Sum_probs=97.0
Q ss_pred HHHHHHHHHHc---CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCc-----------
Q 021539 129 IQARNRALKHC---GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKES----------- 193 (311)
Q Consensus 129 e~aR~~IA~~L---ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~----------- 193 (311)
.+.|+.||+++ ++++++ |++|+|+++++.++.. + +.+|+.|+.. -.+. . ....++..|.
T Consensus 78 ~~lr~aia~~~~~~~~~~d~--I~it~Ga~~al~~l~~-l-~~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~~~~~~~~ 151 (402)
T TIGR03542 78 PFLREAIAENDYRGRIDPEE--IFISDGAKCDVFRLQS-L-FGSDNTVAVQDPVYP-A-YVDSNVMAGRAGVLDDDGRYS 151 (402)
T ss_pred HHHHHHHHHHHHhcCCCHHH--EEECCCcHHHHHHHHH-h-cCCCCEEEEeCCCCc-c-hHHHHHHcCCccccccccccc
Confidence 47889999876 677665 9999999999998754 3 3578887532 2222 1 2233445577
Q ss_pred EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---c
Q 021539 194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---G 264 (311)
Q Consensus 194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G 264 (311)
++..+|.+..++ +..+ +.+ ..+ +++|.++ ++=||+.++.++ |.+ |+++++++++|-+..-. +
T Consensus 152 ~~~~v~~~~~~~-~~~~-~~~--~~~-----~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~ 222 (402)
T TIGR03542 152 KITYLPCTKENN-FIPD-LPE--EPK-----IDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDP 222 (402)
T ss_pred eEEEeecchhhC-CCCC-ccc--cCC-----ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCC
Confidence 888888753211 2222 111 011 3455443 225999999554 433 58899999999987631 1
Q ss_pred CcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 265 EDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 265 ~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
..+..+..+ +.-+++.|+=| .||.| | +|+++..++..
T Consensus 223 ~~~~~~~~~~~~~~~vi~~~SfSK-~~g~p-GlRiG~~i~~~~l~ 265 (402)
T TIGR03542 223 SLPHSIFEIPGAKECAIEFRSFSK-TAGFT-GVRLGWTVVPKELT 265 (402)
T ss_pred CCCcchhhCCCCcccEEEEecCcc-ccCCC-CcceEEEEecHHHh
Confidence 112233222 12366788899 88844 6 79998876543
No 256
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.23 E-value=1.2e-05 Score=81.09 Aligned_cols=167 Identities=8% Similarity=0.065 Sum_probs=105.3
Q ss_pred HHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeC
Q 021539 130 QARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 130 ~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
+.|+.||++++ +++++ |+.|+|+++++.+++..+. .+||.|+... .+. .....+....|++++.+|.
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~--Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~-~~~~~~~~~~g~~~v~v~~ 165 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNK--LVLTAGATSANETLMFCLA-EPGDAFLLPTPYYP-GFDRDLKWRTGVEIVPIHC 165 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHH--eEEccChHHHHHHHHHHhC-CCCCEEEECCCCCC-chHHHHhhcCCcEEEEEec
Confidence 57888888885 45554 9999999999999999873 6899886432 222 1112222246899988987
Q ss_pred CC-CCcccCHHHHHhhhhccC-CCCCceEEEE--ecccccchhcHHHHHH----HHHCCcEEEecccccC---ccCcccC
Q 021539 201 TW-LDLRIKGSQLSQNFRRKC-KYTPKGLFSY--PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLV---FGEDQLA 269 (311)
Q Consensus 201 ~~-~~g~id~~~L~~~l~~~~-~~~~t~LVs~--~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv---~G~~pld 269 (311)
+. .+..++.+.+++.+++.. ...+++++.+ +++=||..+|.+++.+ |+++++++++|=+-+. .+.....
T Consensus 166 ~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s 245 (468)
T PLN02450 166 SSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVS 245 (468)
T ss_pred CCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCccc
Confidence 53 234567788888775410 0012344333 3335999999887632 5789999999988652 0111111
Q ss_pred ---CC---------CCCCcEEEEccccCcCCCC-CceEEEEEeCC
Q 021539 270 ---LA---------LHRPDLVLCTLDNNTHAQP-LKITCLLVRRK 301 (311)
Q Consensus 270 ---l~---------~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~ 301 (311)
+. ..+-=+++-|+=| .||.| -.+|+++..++
T Consensus 246 ~l~~~~~~~~~~~~~~~~vi~l~S~SK-~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 246 VMEVLKDRKLENTDVSNRVHIVYSLSK-DLGLPGFRVGAIYSNDE 289 (468)
T ss_pred HHHHhhhcccccCCCCCcEEEEEeccc-cCCCCCccEEEEEECCH
Confidence 10 0111267889999 77633 14999988654
No 257
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.23 E-value=4e-05 Score=75.90 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=103.7
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.||+++ | .+++ .+|+.|.|+++|+..+..++ ..+||+|+.. -.... ...+.+-.|.++..+|.+.
T Consensus 69 ~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~al~~~~~a~-~~pGDeVlip~P~Y~~--y~~~~~~~gg~~v~v~l~~ 144 (393)
T COG0436 69 ELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKEALFLAFLAL-LNPGDEVLIPDPGYPS--YEAAVKLAGGKPVPVPLDE 144 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcC--HHHHHHhcCCEEEEEeCCc
Confidence 5666666544 3 2332 25999999999999998887 5789997632 22221 1223344589999998642
Q ss_pred --CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCC
Q 021539 203 --LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALA 271 (311)
Q Consensus 203 --~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~ 271 (311)
.+-.++.++|++.++++ |+++.+ +++=||.+++-+++. + |++++++++.|-+=.-. |..+..+.
T Consensus 145 ~~~~f~~d~~~l~~~i~~k-----tk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~ 219 (393)
T COG0436 145 EENGFKPDLEDLEAAITPK-----TKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSIL 219 (393)
T ss_pred CccCCcCCHHHHHhhcCcc-----ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHh
Confidence 25578999999999886 455544 555699999977663 3 58899999999762210 11122222
Q ss_pred CCC----CcEEEEccccCcCCCCCc--eEEEEEe
Q 021539 272 LHR----PDLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 272 ~l~----~Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
+.. .=+.+-|+=| -|| -+| +|.++..
T Consensus 220 ~~~~~~~~~i~i~s~SK-~~~-mtGwRvG~~v~~ 251 (393)
T COG0436 220 ELAGARDRTITINSFSK-TYG-MTGWRIGWVVGP 251 (393)
T ss_pred hcCCCcceEEEEecccc-ccc-ccccceeEeecC
Confidence 222 2345558899 777 445 8999877
No 258
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.21 E-value=3.6e-05 Score=73.53 Aligned_cols=148 Identities=13% Similarity=0.065 Sum_probs=96.4
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
+.|+.||++++. ++ |++|+|+++++.++.. ..+||.|+.. -.+ ......++..|+++..+|.+
T Consensus 53 ~Lr~~ia~~~~~--~~--I~it~Gs~~al~~~~~---~~~gd~v~v~~P~y--~~~~~~~~~~g~~~~~v~~~------- 116 (330)
T PRK05664 53 GLEAAARAYYGA--PQ--LLPVAGSQAAIQALPR---LRAPGRVGVLSPCY--AEHAHAWRRAGHQVRELDEA------- 116 (330)
T ss_pred HHHHHHHHHhCC--CC--EEECcCHHHHHHHHHH---ccCCCEEEEcCCCh--HHHHHHHHHcCCeEEEechh-------
Confidence 679999999986 33 9999999999998864 2578987632 121 12344456679999888763
Q ss_pred HHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCCC--C-cEEEE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALHR--P-DLVLC 280 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l~--~-Dfl~~ 280 (311)
++++.+++ + ..++.+ +.+=||.++|.+++.+ ++++++++++|=+-.- ......+..+. . =+++-
T Consensus 117 --~~~~~~~~-~----~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~-~~~~~s~~~~~~~~~vi~~~ 188 (330)
T PRK05664 117 --EVEAALDS-L----DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMD-NTPQHSLAACAHRPGLIVLR 188 (330)
T ss_pred --hHhhhhcC-C----CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCccc-CCCcccccccccCCCEEEEe
Confidence 23344432 2 223333 4445999999877633 4678999999987643 22111222221 1 27899
Q ss_pred ccccCcCCCCCc--eEEEEEeCCCC
Q 021539 281 TLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 281 S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
|+-| .||.| | +|.++..+++.
T Consensus 189 SfSK-~~gl~-GlRiG~~v~~~~l~ 211 (330)
T PRK05664 189 SFGK-FFGLA-GARLGFVLAEPALL 211 (330)
T ss_pred eccc-cccCC-CcceEEEEeCHHHH
Confidence 9999 88844 6 89998876543
No 259
>PLN02368 alanine transaminase
Probab=98.21 E-value=1.6e-05 Score=78.84 Aligned_cols=163 Identities=10% Similarity=-0.034 Sum_probs=103.2
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.|+.||+++ | ++++ +|++|+|+++++.+++..+...+||.|+.. -.+. . ....++..|.+++.+|.+.
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~-~-y~~~~~~~g~~~v~v~~~~ 186 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYP-L-YSATISLLGGTLVPYYLEE 186 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCc-c-HHHHHHHcCCEEEEEeccc
Confidence 6788888877 6 4444 599999999999999887743589988632 2222 1 2233455688998898764
Q ss_pred C-CcccCHHHHHhhhhccC-CCCCceEEE--EecccccchhcHHHHHH----HHHCCcEEEecccccCc---cCcc-cCC
Q 021539 203 L-DLRIKGSQLSQNFRRKC-KYTPKGLFS--YPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GEDQ-LAL 270 (311)
Q Consensus 203 ~-~g~id~~~L~~~l~~~~-~~~~t~LVs--~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~p-ldl 270 (311)
. +-.++.+.|++.+++.. +..+++++. .+++=||.+++.+++.+ |++++++++.|-+-.-. +..+ ..+
T Consensus 187 ~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~ 266 (407)
T PLN02368 187 SENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISA 266 (407)
T ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccH
Confidence 2 23578999998886410 001244333 24456999999887633 57899999999875321 1111 111
Q ss_pred C----CCC-------CcEEEEccccCcC-CCCCc--eEEEEE
Q 021539 271 A----LHR-------PDLVLCTLDNNTH-AQPLK--ITCLLV 298 (311)
Q Consensus 271 ~----~l~-------~Dfl~~S~HK~l~-G~P~G--iG~L~v 298 (311)
. .+. -=+++.|+-| .| |.| | +|.+++
T Consensus 267 ~~~~~~~~~~~~~~~~vI~~~SfSK-~~~~~~-GlRiGy~i~ 306 (407)
T PLN02368 267 KKVLMDMGPPISKEVQLVSFHTVSK-GYWGEC-GQRGGYFEM 306 (407)
T ss_pred HHHHhhhcccccccceEEEEecCCc-ccccCC-ccceEEEEE
Confidence 1 111 2266788999 65 533 5 788874
No 260
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.21 E-value=2.7e-06 Score=81.21 Aligned_cols=162 Identities=14% Similarity=0.146 Sum_probs=107.4
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHH--HHHhCCcEEEEEeCCCCCcccC
Q 021539 131 ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKG--FAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 131 aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~--la~~~G~~V~~vp~~~~~g~id 208 (311)
..+++|+++|-.. -.|++++|.++.+.+..--..+|..|+.....|...+.. ++.-.|+.+..+.... ||.++
T Consensus 61 LE~~vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~-dgtm~ 135 (384)
T KOG1368|consen 61 LEQRVAELFGKEA----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN-DGTMD 135 (384)
T ss_pred HHHHHHHHhCccc----eeeecccccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCC-CCeee
Confidence 3456899999642 689999999988877754445787776444333111110 1122367777766543 89999
Q ss_pred HHHHHhhhhcc---CCCCCceEEEEe--cc-cccchhcHHHHHH----HHHCCcEEEecccccCccC--cccCCCC--CC
Q 021539 209 GSQLSQNFRRK---CKYTPKGLFSYP--VV-VNGTRYSMHWISE----AHRNAWHVLLDATGLVFGE--DQLALAL--HR 274 (311)
Q Consensus 209 ~~~L~~~l~~~---~~~~~t~LVs~~--~~-~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~--~pldl~~--l~ 274 (311)
+++|++.++.+ +...+|+|+|+- +. +-|..+|++|+.+ ++++|..+|+|++-.+-.. ..+.++. ..
T Consensus 136 ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~ 215 (384)
T KOG1368|consen 136 LEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSA 215 (384)
T ss_pred HHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHh
Confidence 99999999842 333468999984 44 3459999998733 5889999999998654111 2223333 24
Q ss_pred CcEEEEccccCcCCCCCceEEEEEeC
Q 021539 275 PDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
.|.+.+.+-| =+|+|- |-++|-+
T Consensus 216 fDSVsiCLSK-glgAPV--GSViVG~ 238 (384)
T KOG1368|consen 216 FDSVSICLSK-GLGAPV--GSVIVGS 238 (384)
T ss_pred hhhhhhhhhc-cCCCCc--ccEEEcc
Confidence 7999999999 555584 4455543
No 261
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.20 E-value=3.2e-05 Score=75.55 Aligned_cols=162 Identities=12% Similarity=0.026 Sum_probs=102.0
Q ss_pred HHHHHHHHHHcC------CCCCCCeE--EEeCCHHHHHHHHHhcCC-CCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEE
Q 021539 129 IQARNRALKHCG------LSEDEYLV--LFVPNYKEAMLMIGESYP-FFKGNYYLTII-SEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~V--vFTsnaTealnlv~~s~~-~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~v 198 (311)
.+.|+.||+++. ++++ +| +.|+|+++|+.++++.+. ..+||.|+... .+. . ....++..|++++.+
T Consensus 72 ~~lR~aia~~~~~~~~~~~~~~--~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~-~-~~~~~~~~g~~~v~v 147 (396)
T PRK09257 72 AAYRQAVQELLFGADSPALAAG--RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWP-N-HRAIFEAAGLEVKTY 147 (396)
T ss_pred HHHHHHHHHHhcCCCCcccccC--eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcc-c-HHHHHHHcCCcEEEE
Confidence 368888888763 1333 35 999999999999987654 36899886322 211 1 233445579999999
Q ss_pred eC-CCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCc----c
Q 021539 199 PE-TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED----Q 267 (311)
Q Consensus 199 p~-~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~----p 267 (311)
|. +.++..++.+.+++.++... .++.++.++ ++=||..++-++. .+ |++++++++.|-+=.-.... .
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 225 (396)
T PRK09257 148 PYYDAATKGLDFDAMLADLSQAP--AGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDA 225 (396)
T ss_pred eccccccCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHH
Confidence 86 22234689999988876321 113444433 3359999998765 33 57899999998763210110 0
Q ss_pred cC---CCCC-CCcEEEEccccCcCCCCCc--eEEEEE
Q 021539 268 LA---LALH-RPDLVLCTLDNNTHAQPLK--ITCLLV 298 (311)
Q Consensus 268 ld---l~~l-~~Dfl~~S~HK~l~G~P~G--iG~L~v 298 (311)
.. +... .-=+++.|+=| .|| |.| +|++++
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK-~~~-~~GlRiG~~~~ 260 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSK-NFG-LYGERVGALSV 260 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCC-cCc-cccccceeEEE
Confidence 01 1111 12377899999 888 655 788874
No 262
>PRK05839 hypothetical protein; Provisional
Probab=98.18 E-value=4.9e-05 Score=73.87 Aligned_cols=160 Identities=13% Similarity=0.065 Sum_probs=95.8
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
+.|+.+|+++ | ++++ +|++|+|+++++.++...+.. .+|+.|+.. -.+. . ....++..|+++..+|.+
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~-~-~~~~~~~~g~~v~~v~~~ 139 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQ-I-YEGAAIASRAKVLLMPLT 139 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCch-h-hHHHHHhcCCEEEEeecc
Confidence 4666666554 6 4554 599999999999988776533 467887532 1211 1 223345679999999986
Q ss_pred CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH----HHHHCCcEEEecccccCc-cCccc-CC-C
Q 021539 202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVF-GEDQL-AL-A 271 (311)
Q Consensus 202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~-G~~pl-dl-~ 271 (311)
..+ ..++... ..++ + ++++.++ ++=||+++|.+++. .|+++|+++++|-+-+-. ...+. .+ .
T Consensus 140 ~~~~~~~d~~~--~~~~-~-----~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~ 211 (374)
T PRK05839 140 KENDFTPSLNE--KELQ-E-----VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLE 211 (374)
T ss_pred cccCCcCCcch--hhhc-c-----ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhh
Confidence 422 2333322 2222 2 3455443 33599999987663 257899999999875420 11111 11 0
Q ss_pred --------CCCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539 272 --------LHRPDLVLCTLDNNTHAQPL-KITCLLVRRKS 302 (311)
Q Consensus 272 --------~l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~ 302 (311)
..+-=+++.|+=| .||.|- .+|+++..++.
T Consensus 212 ~~~~~~~~~~~~vi~~~SfSK-~~~~~GlRiG~ii~~~~~ 250 (374)
T PRK05839 212 ASILVGNESFKNVLVINSISK-RSSAPGLRSGFIAGDASI 250 (374)
T ss_pred hhcccCccccCcEEEEecccc-ccCCccceeEEEecCHHH
Confidence 1112277899999 777452 38988876544
No 263
>PRK08354 putative aminotransferase; Provisional
Probab=98.15 E-value=9.9e-05 Score=69.87 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=95.1
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
...|+.+|+++|. + |++|+|+++++.+++..+ .+|+.|+...=... .....++..|.++..++ ++
T Consensus 43 ~~l~~~ia~~~~~---~--I~vt~G~~~al~~~~~~~--~~gd~vlv~~P~y~-~~~~~~~~~g~~~~~~~-------~d 107 (311)
T PRK08354 43 EWLEEEFSKLFGE---P--IVITAGITEALYLIGILA--LRDRKVIIPRHTYG-EYERVARFFAARIIKGP-------ND 107 (311)
T ss_pred HHHHHHHHHHHCC---C--EEECCCHHHHHHHHHHhh--CCCCeEEEeCCCcH-HHHHHHHHcCCEEeecC-------CC
Confidence 3678999999983 3 999999999999887544 37888863321111 23344556788886543 35
Q ss_pred HHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcccc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDN 284 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK 284 (311)
.+.|++.+++ + ..-+++.+++-||..++.+++.+ ++++|+++++|-+-.-.....-... ..--+++-|+=|
T Consensus 108 ~~~l~~~~~~-~---~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~-~~~vi~~~S~SK 182 (311)
T PRK08354 108 PEKLEELVER-N---SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPE-GENIIKLRTFTK 182 (311)
T ss_pred HHHHHHhhcC-C---CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccC-CCcEEEEeccHh
Confidence 6777777653 1 12223334446999999876633 4678999999998632011111111 233478889999
Q ss_pred CcCCCCCc--eEEEEE
Q 021539 285 NTHAQPLK--ITCLLV 298 (311)
Q Consensus 285 ~l~G~P~G--iG~L~v 298 (311)
.||.| | +|+++.
T Consensus 183 -~~~l~-GlRiG~~v~ 196 (311)
T PRK08354 183 -SYGLP-GIRVGYVKG 196 (311)
T ss_pred -hcCCc-cceeeeeee
Confidence 88845 6 688775
No 264
>PLN02231 alanine transaminase
Probab=98.14 E-value=4.8e-05 Score=78.22 Aligned_cols=169 Identities=11% Similarity=-0.001 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCC
Q 021539 128 EIQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 128 le~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~ 202 (311)
+.+.|+.||+++ |.+.+..+|++|+|+++|+.+++..+.-.+||.|+... .+. .. ...++..|.++..++.+.
T Consensus 170 ~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~-~y-~~~~~~~g~~~v~~~l~~ 247 (534)
T PLN02231 170 IKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYP-LY-SASIALHGGTLVPYYLDE 247 (534)
T ss_pred cHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCCh-hH-HHHHHHcCCEEEEEecCc
Confidence 457888899887 43223335999999999999999987424688886332 222 11 222345688998888864
Q ss_pred CC-cccCHHHHHhhhhccCCC-CCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc----cCcccCC
Q 021539 203 LD-LRIKGSQLSQNFRRKCKY-TPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF----GEDQLAL 270 (311)
Q Consensus 203 ~~-g~id~~~L~~~l~~~~~~-~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~----G~~pldl 270 (311)
++ -.++.++|++.+++...+ .+++++.+ +++=||.+++.+++. + |+++|++++.|-+-.-. +.....+
T Consensus 248 ~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~ 327 (534)
T PLN02231 248 ATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSF 327 (534)
T ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccH
Confidence 32 357899999888652111 12444333 344599999987653 2 58899999999764420 1111122
Q ss_pred CCC---------CCcEE-EEccccCcCCCC-CceEEEEE
Q 021539 271 ALH---------RPDLV-LCTLDNNTHAQP-LKITCLLV 298 (311)
Q Consensus 271 ~~l---------~~Dfl-~~S~HK~l~G~P-~GiG~L~v 298 (311)
..+ ++..+ .-|+=|.++|-| ..+|.+.+
T Consensus 328 ~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 328 KKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred HHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 111 12234 448899555522 24788876
No 265
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.14 E-value=2.9e-05 Score=76.29 Aligned_cols=165 Identities=15% Similarity=0.050 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHcCCCCC----CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC-
Q 021539 128 EIQARNRALKHCGLSED----EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET- 201 (311)
Q Consensus 128 le~aR~~IA~~Lga~~d----ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~- 201 (311)
+..||+.||+.++-+.+ ..+|+.|+|.++|+.+++.++. ++|.+|+.+. +.+... .++...|.+|+...+-
T Consensus 105 ~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp~Y~--~~a~~~~lEVR~ydlLP 181 (447)
T KOG0259|consen 105 ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFPLYD--TRAIYSGLEVRYYDLLP 181 (447)
T ss_pred cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCchHH--HhhhhcCceeEeecccC
Confidence 45799999999875321 2249999999999999999987 7888886442 333222 2355678998875421
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe-cccccchhcH---HHHHH-HHHCCcEEEeccc--ccCccCcc-cCCCC-
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VVVNGTRYSM---HWISE-AHRNAWHVLLDAT--GLVFGEDQ-LALAL- 272 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAa--Qsv~G~~p-ldl~~- 272 (311)
..+=+||++.++.+++++| ..||.+. .+-+|.++.- ++|++ |++.|+.++.|=+ |.+.|-.| +.|..
T Consensus 182 e~~weIDL~~veal~DENT----~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~f 257 (447)
T KOG0259|consen 182 EKDWEIDLDGVEALADENT----VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKF 257 (447)
T ss_pred cccceechHHHHHhhccCe----eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhc
Confidence 1245799999999999875 5677763 4457887774 56655 6999999999975 22223333 23333
Q ss_pred --CCCcEEEEccccCcCCCCC-ceEEEEEeC
Q 021539 273 --HRPDLVLCTLDNNTHAQPL-KITCLLVRR 300 (311)
Q Consensus 273 --l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~ 300 (311)
.-|=.-+.+.-|.|+= |- .+|-+.+.+
T Consensus 258 ssiVPVitlggisKrW~V-PGWRlGWi~~hD 287 (447)
T KOG0259|consen 258 SSIVPVITLGGISKRWIV-PGWRLGWIALHD 287 (447)
T ss_pred cccCceEeeccccccccc-CCceeeeEEEec
Confidence 2233445566787775 62 488887765
No 266
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.12 E-value=4.5e-05 Score=73.90 Aligned_cols=163 Identities=15% Similarity=0.128 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C--C---CCCEEEE-ccCcChHHHHHHHHhCCcEE--
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F--F---KGNYYLT-IISEESDYIKGFAAQKESKV-- 195 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~--~---~Gd~Ils-~~eh~~~~~~~la~~~G~~V-- 195 (311)
....++..+.++++.+. + .|+||+|++||+..++.... + + ..+.|++ ....|......+.. .+...
T Consensus 80 ~~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~ 154 (396)
T PRK02627 80 IEPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSA-TGQPKYQ 154 (396)
T ss_pred CHHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHh-cCCcccc
Confidence 33445666777777665 3 49999999999988877321 1 1 1145543 33333111111110 11111
Q ss_pred -EEEeCCCCCccc------CHHHHHhhhhccCCCCCceEEEEec-c-cccc-hhc---HHHHHH-HHHCCcEEEeccccc
Q 021539 196 -IAAPETWLDLRI------KGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGT-RYS---MHWISE-AHRNAWHVLLDATGL 261 (311)
Q Consensus 196 -~~vp~~~~~g~i------d~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~-i~P---i~~I~~-a~~~g~~vlvDAaQs 261 (311)
...|.. . .+ +.++|++++.++ +++|.+.. + .+|. ..| +++|.+ |+++|+++++|-+++
T Consensus 155 ~~~~~~~--~-~~~~~~~~d~~~l~~~i~~~-----~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~ 226 (396)
T PRK02627 155 EGFEPLV--E-GFIYVPFNDIEALKAAITDK-----TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT 226 (396)
T ss_pred ccCCCCC--C-CceEeCCCCHHHHHHhcCCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc
Confidence 111111 1 12 678888888643 46666543 3 4663 444 556654 689999999999998
Q ss_pred -CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 262 -VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 262 -v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+ |.. .++.....+|+++|| | -+|..-.+|+++.+++..+
T Consensus 227 g~-g~~g~~~~~~~~~~~pdi~t~s--K-~~~~G~rig~~~~~~~~~~ 270 (396)
T PRK02627 227 GM-GRTGKLFAYQHYGIEPDIMTLA--K-GLGGGVPIGAVLAKEKVAD 270 (396)
T ss_pred CC-CccCceeeehhcCCCCCEEEEc--c-hhhCCcccEEEEEcHHHHh
Confidence 4 532 122233468988876 9 6662123899998876543
No 267
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.11 E-value=3.6e-05 Score=73.91 Aligned_cols=154 Identities=18% Similarity=0.177 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHcC---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcCh-HHHHHHHHhCCcEEEEEeCCCC
Q 021539 128 EIQARNRALKHCG---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEES-DYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 128 le~aR~~IA~~Lg---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~-~~~~~la~~~G~~V~~vp~~~~ 203 (311)
..+.|+.||++++ +++++ |++|+|+++++.++...+ +.|+.. .+. ......++..|.++..+|.+.
T Consensus 58 ~~~Lr~aia~~~~~~~~~~~~--i~it~Ga~~~i~~~~~~~-----d~v~v~--~P~y~~~~~~~~~~g~~~~~v~~~~- 127 (335)
T PRK14808 58 DEELIEKILSYLDTDFLSKNN--VSVGNGADEIIYVMMLMF-----DRSVFF--PPTYSCYRIFAKAVGAKFLEVPLTK- 127 (335)
T ss_pred hHHHHHHHHHHhCCCCCCcce--EEEcCCHHHHHHHHHHHh-----CcEEEC--CCCHHHHHHHHHHcCCeEEEecCCC-
Confidence 3479999999999 76655 999999999999998877 345422 121 123445666799999999864
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cCcccC-CCCCCCcEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GEDQLA-LALHRPDLVL 279 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~~pld-l~~l~~Dfl~ 279 (311)
++.++... +++ ++++.++ ++=||..++.+++.++-++++++++|-+-.-. +....+ +....-=+++
T Consensus 128 ~~~~~~~~----~~~------~~~i~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~ 197 (335)
T PRK14808 128 DLRIPEVN----VGE------GDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVI 197 (335)
T ss_pred cCCCChhH----ccC------CCEEEEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEE
Confidence 44444321 221 2454443 33599999999987754689999999975410 211112 1122223777
Q ss_pred EccccCcCCCCCc--eEEEEEeCCCC
Q 021539 280 CTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 280 ~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
.|+=| .||. .| +|+++..+++.
T Consensus 198 ~S~SK-~~~l-~GlRvG~~v~~~~~~ 221 (335)
T PRK14808 198 RTFSK-AFSL-AAQRIGYVVSSEKFI 221 (335)
T ss_pred Eechh-hccC-cccceEEEEeCHHHH
Confidence 89999 8883 36 79999876543
No 268
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.09 E-value=6.3e-05 Score=73.24 Aligned_cols=162 Identities=13% Similarity=0.106 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCCCCCC----EEEEc-cCcChHHHHHHHHhCCcEEEE-
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPFFKGN----YYLTI-ISEESDYIKGFAAQKESKVIA- 197 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~~~Gd----~Ils~-~eh~~~~~~~la~~~G~~V~~- 197 (311)
...+.-++++++.+. + .|+||+|+|||+..++.. +...+|+ +|++. ..+|......+. ..+.....
T Consensus 74 ~~~~la~~l~~~~~~--~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~-~~~~~~~~~ 148 (389)
T PRK01278 74 EQERLAERLVENSFA--D--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIA-AGGQEKYLE 148 (389)
T ss_pred HHHHHHHHHHhhCCC--C--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHh-ccCChhhcc
Confidence 334566667776643 3 499999999999877553 2223444 66543 334422111111 01111100
Q ss_pred --EeCCCCCc----ccCHHHHHhhhhccCCCCCceEEEEe-cc-ccc-chhc---HHHHHH-HHHCCcEEEecccccCcc
Q 021539 198 --APETWLDL----RIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNG-TRYS---MHWISE-AHRNAWHVLLDATGLVFG 264 (311)
Q Consensus 198 --vp~~~~~g----~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG-~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G 264 (311)
.|... +- -.+.+++++.++++ +++|.+. .+ .+| ...| +++|.+ |+++|+++++|-+|.-.|
T Consensus 149 ~~~~~~~-~~~~~~~~d~~~l~~~l~~~-----~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g 222 (389)
T PRK01278 149 GFGPLVP-GFDQVPFGDIEALKAAITPN-----TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG 222 (389)
T ss_pred cCCCCCC-CceEeCCCCHHHHHHhhCCC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 11110 10 13678888888653 4666654 33 466 3334 556655 689999999999998214
Q ss_pred Ccc----cCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 265 EDQ----LALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 265 ~~p----ldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
... .+.....+|++++ -| -+| + | +|+++.+++..+
T Consensus 223 ~~g~~~~~~~~~~~pdi~t~--sK-~l~-~-G~~ig~~~~~~~~~~ 263 (389)
T PRK01278 223 RTGKLFAHEWAGVTPDIMAV--AK-GIG-G-GFPLGACLATEEAAK 263 (389)
T ss_pred cCCcceeecccCCCCCEEEE--eh-hcc-C-CcceEEEEEcHHHHh
Confidence 321 1222356887765 48 555 2 4 899998876543
No 269
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.07 E-value=2.2e-05 Score=76.94 Aligned_cols=159 Identities=7% Similarity=-0.020 Sum_probs=91.8
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCC----CCCCEEEE--ccCcChHHHHHHHHhCC----c
Q 021539 130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPF----FKGNYYLT--IISEESDYIKGFAAQKE----S 193 (311)
Q Consensus 130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~----~~Gd~Ils--~~eh~~~~~~~la~~~G----~ 193 (311)
+.|+.||+++ ++++++ |++|+|+++|+.+++..+.- .+|+.|+. .-++.. ....+...+ .
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~~--I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~--y~~~~~~~~~~~~~ 153 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQN--IALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIG--YADAGLEEDLFVSY 153 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChhh--EEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchh--hHHHhhccCceeec
Confidence 6788888877 356554 99999999999999887742 35777754 223221 111111111 2
Q ss_pred EEEEEeCCCC--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccC
Q 021539 194 KVIAAPETWL--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGE 265 (311)
Q Consensus 194 ~V~~vp~~~~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~ 265 (311)
....++++.+ +-.++.++|+ +..+ ++++.++ ++=||++++.+++ .+ |+++++++++|-+... ..
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~-----~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~ 225 (416)
T PRK09440 154 RPNIELLPEGQFKYHVDFEHLH--IDED-----TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-PF 225 (416)
T ss_pred ccccccccccccccCCCHHHcc--cCCC-----ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-cC
Confidence 2222333221 1246777776 2322 3444443 3359999997655 33 5789999999999753 21
Q ss_pred ccc---CCCC--CCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539 266 DQL---ALAL--HRPDLVLCTLDNNTHAQPL-KITCLLVRRKS 302 (311)
Q Consensus 266 ~pl---dl~~--l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~ 302 (311)
..+ +... .+-=+++.|+-| + +.|- .+|.++..+++
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK-~-~~pGlRiG~~i~~~~l 266 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSK-L-GLPGVRCGIVIADEEI 266 (416)
T ss_pred CCcchhhcCccccCCeEEEecccc-c-CCCcceEEEEeCCHHH
Confidence 111 1111 111267789999 5 4341 38888876554
No 270
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.05 E-value=6.3e-05 Score=73.90 Aligned_cols=157 Identities=14% Similarity=0.037 Sum_probs=95.6
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcE--------
Q 021539 130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESK-------- 194 (311)
Q Consensus 130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~-------- 194 (311)
+.|+.||+++ ++++++ |++|+|+++++.++... +.+||.|+.. -.+. . ....++..|.+
T Consensus 80 ~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~l~~~--~~~gd~V~v~~P~Y~-~-~~~~~~~~g~~~~~~~~~~ 153 (409)
T PRK07590 80 FLREKIAENDYQARGCDISADE--IFISDGAKCDTGNILDI--FGPDNTIAVTDPVYP-V-YVDTNVMAGRTGEANEDGR 153 (409)
T ss_pred HHHHHHHHHHHHhcCCcCChhh--EEECCCHHHHHHHHHHh--cCCCCEEEEeCCCCc-c-hHHHHHHcCCccccccccc
Confidence 6888888875 676654 99999999999987543 3688988632 2222 1 12233445665
Q ss_pred ---EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH---H-HHHCCcEEEecccccCc--
Q 021539 195 ---VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF-- 263 (311)
Q Consensus 195 ---V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~-- 263 (311)
+..+|.+..++ +..+ +. ..+ ++++.++ ++=||++++.+++. + |++++++++.|-+..-.
T Consensus 154 ~~~~~~v~~~~~~~-~~~d-~~---~~~-----~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~ 223 (409)
T PRK07590 154 YSGIVYLPCTAENN-FVPE-LP---EEK-----VDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFIS 223 (409)
T ss_pred ccceeEeecccccC-Cccc-Cc---ccC-----ceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhcc
Confidence 77788753222 2221 11 122 3454443 33599999987653 3 57899999999876510
Q ss_pred -cCcccCCCCCC----CcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 264 -GEDQLALALHR----PDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 264 -G~~pldl~~l~----~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+..+..+..+. .-+++.|+=| .||.| | +|.++..+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~vi~~~SfSK-~~~~p-GlRiG~~i~~~~li~ 269 (409)
T PRK07590 224 DPSLPHSIYEIEGARECAIEFRSFSK-TAGFT-GTRCAYTVVPKELKG 269 (409)
T ss_pred CCCCCcchhhCCCcccceEEEecCcc-ccCCc-CceeEEEEcCHHHhh
Confidence 11122232221 2266779999 88744 5 799988766554
No 271
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.02 E-value=8.9e-05 Score=71.37 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
.+.|+.+|+++|+++.+ +|++|+|++|++.++... +.+|+.++..-.+ .. ....++..|.++..+|.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~-~I~i~~Gs~e~i~~l~~~--~~~g~v~v~~P~y-~~-y~~~~~~~g~~~~~v~~~~------ 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAA-HVLPVAGSQAAIRALPAL--LPRGRVGIAPLAY-SE-YAPAFARHGHRVVPLDEAA------ 124 (339)
T ss_pred HHHHHHHHHHhCCCCcc-cEEECcCHHHHHHHHHHh--cCCCeEEEcCCCc-HH-HHHHHHHCCCEEEeecccc------
Confidence 37899999999996322 499999999999977653 3566633321111 12 2334556799888777642
Q ss_pred HHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCC-CCc--EEEEc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALH-RPD--LVLCT 281 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l-~~D--fl~~S 281 (311)
+.+ .+..+ .-+++-+.+=||++++.+++.+ +.+++.++++|=+-.- -.....+..+ +.+ +++-|
T Consensus 125 -~~~----~~~~~---~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~l~S 195 (339)
T PRK06959 125 -DTL----PAALT---HLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVVLRS 195 (339)
T ss_pred -hhc----cccCC---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEEEec
Confidence 111 11111 2233334446999999988744 3467888899987543 2111122111 112 77889
Q ss_pred cccCcCCCCCc--eEEEEEeCCCC
Q 021539 282 LDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 282 ~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+=| .||.| | +|.++..+++.
T Consensus 196 fSK-~~gl~-GlRiGy~v~~~~li 217 (339)
T PRK06959 196 VGK-FFGLA-GVRAGFVLAAPALL 217 (339)
T ss_pred Chh-hcCCc-chheEEEecCHHHH
Confidence 999 88844 6 79999876543
No 272
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.02 E-value=6.7e-05 Score=75.16 Aligned_cols=166 Identities=15% Similarity=0.058 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CC-CC---CEEEEccCcChHHHHHHHHhCCcEEEEEeC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FF-KG---NYYLTIISEESDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~-~G---d~Ils~~eh~~~~~~~la~~~G~~V~~vp~ 200 (311)
..++=+-++.+||++++.- =.-|.|.|||+-..-..+. .. +| -++++...- ..++..+++..+++++.+|+
T Consensus 122 e~~~Vnm~~~L~~~~~~~~-g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v-~~a~eK~a~yf~v~l~~V~~ 199 (491)
T KOG1383|consen 122 EAECVNMIANLFNAPSDSC-GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV-HAAFEKAARYFEVELREVPL 199 (491)
T ss_pred HHHHHHHHHHHhcCCcccc-CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH-HHHHHHHHhhEEEEEEeeec
Confidence 3477788999999986532 2346788888433222221 01 11 123322110 12355667777889999999
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH-CCcEEEecccccCc-------cCcccC
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR-NAWHVLLDATGLVF-------GEDQLA 269 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~-------G~~pld 269 (311)
+..+-++|+..+.+.++++ |.+++..+- -+|.+=|+++|.+ +-+ .++.+|+||+-.-. .-.++|
T Consensus 200 ~~~~~~~D~~k~~~~i~eN-----ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 200 DEGDYRVDPGKVVRMIDEN-----TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD 274 (491)
T ss_pred cccceEecHHHHHHHhccc-----eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccc
Confidence 8767899999999999986 455554433 4999999999966 455 99999999985410 223567
Q ss_pred CCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
+..-++--+++++||+=|. |+|+|..+-|.+
T Consensus 275 Fr~p~V~Sisa~~HKYGl~-~~G~~~vl~r~k 305 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKYGLA-PAGSSWVLYRNK 305 (491)
T ss_pred cCCCCceeEeeccceeeee-ecCcEEEEEccc
Confidence 7777788899999994334 999998777654
No 273
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.01 E-value=8.7e-05 Score=70.88 Aligned_cols=157 Identities=13% Similarity=0.071 Sum_probs=100.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id 208 (311)
.+.|+.+|+++|.+++. |+.|+|+++++.++.. + +.+|+.++..-.+ ......++..|.++..+|.+. . ..+
T Consensus 43 ~~lr~~ia~~~~~~~~~--I~it~Gs~~~l~~~~~-~-~~~~~vv~~~P~y--~~y~~~~~~~G~~v~~vp~~~-~-~~~ 114 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIK--VLIGPGLTHFIYRLLS-Y-INVGNIIIVEPNF--NEYKGYAFTHGIRISALPFNL-I-NNN 114 (332)
T ss_pred HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHH-H-hCCCcEEEeCCCh--HHHHHHHHHcCCeEEEEeCCc-c-cCc
Confidence 47999999999998765 9999999999999886 3 3456544432111 123344667799999999863 2 234
Q ss_pred HHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc-cCc--c-cCC-CCCCCcE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF-GED--Q-LAL-ALHRPDL 277 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~-G~~--p-ldl-~~l~~Df 277 (311)
.+.+++ .+ ++++.++ ++=||..+|.+++.+ |+++++++++|-+=.-. ... + ..+ ...+-=+
T Consensus 115 ~~~l~~---~~-----~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 115 PEILNN---YN-----FDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred HHHHhh---cC-----CCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 443332 12 3454443 335999999876532 57889999999873310 111 0 111 1112236
Q ss_pred EEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 278 VLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 278 l~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
++-|+=| .||.| | +|.++..+++.
T Consensus 187 ~~~SfSK-~~~l~-GlRiGy~v~~~~li 212 (332)
T PRK06425 187 IGRSLTK-ILGIP-SLRIGYIATDDYNM 212 (332)
T ss_pred EEeecHH-hcCCc-hhhheeeecCHHHH
Confidence 6679999 88844 6 69998876553
No 274
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.01 E-value=8.8e-05 Score=78.60 Aligned_cols=166 Identities=10% Similarity=-0.014 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~ 204 (311)
..+.+|.+.+|+.+|++. .-..|.|+|.|+.+++.+. ..+||.|+..-.-|-+....+. -.|+.-++++..++ .
T Consensus 195 G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haLi-lsga~PVYl~P~rn~~ 269 (714)
T PRK15400 195 GPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLMM-MSDVTPIYFRPTRNAY 269 (714)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeEEEeccccccc
Confidence 345689999999999963 2555788888988888876 4789998765543423333332 34888888764432 1
Q ss_pred ---cccC-----HHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC--C--
Q 021539 205 ---LRIK-----GSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--L-- 270 (311)
Q Consensus 205 ---g~id-----~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l-- 270 (311)
|.|+ .+.+++.++...+......+.++.- --|+.+++++|.+ +|.++ +|+|-|+.. +..+. +
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwga--h~~F~p~~~~ 345 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVP--YTNFSPIYEG 345 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchh--hhccCcccCC
Confidence 2345 7888888876432111113443322 4799999999966 67777 699998763 33221 1
Q ss_pred -CC--CCC---c--EEEEccccCcCCCCCceEEEEEeCC
Q 021539 271 -AL--HRP---D--LVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 271 -~~--l~~---D--fl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
+. .+. | |++-|.|| .+++-+....|-++..
T Consensus 346 ~sam~~ga~~~~~i~vtQStHK-tL~alTQaS~LHvkg~ 383 (714)
T PRK15400 346 KCGMSGGRVEGKVIYETQSTHK-LLAAFSQASMIHVKGD 383 (714)
T ss_pred cChhhcCCCCCCceEEEEchhh-cccchhHHhHHHHcCC
Confidence 11 234 5 99999999 7765666677777654
No 275
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.00 E-value=0.00026 Score=75.08 Aligned_cols=166 Identities=10% Similarity=0.021 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D 204 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~ 204 (311)
..+.+|.+.+|+.+|++. .-..|.|+|.|+.+++.+. ..+||.|+..-.-|-+....+. -.|+..++++..++ .
T Consensus 195 G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aLi-lsga~PVYl~P~~n~~ 269 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLLM-MSDVVPIWLKPTRNAL 269 (713)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeeEEeccccccc
Confidence 345689999999999963 2556788899998888876 5789999755543423333332 34888888764431 2
Q ss_pred ---cccCH-----HHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHHHHHCCcEE-EecccccCccCcccC-----
Q 021539 205 ---LRIKG-----SQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISEAHRNAWHV-LLDATGLVFGEDQLA----- 269 (311)
Q Consensus 205 ---g~id~-----~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~a~~~g~~v-lvDAaQsv~G~~pld----- 269 (311)
|.|+. +.+++.++......+.+.+.++.- --|+..++++|.+.- |+.+ |+|-|+.. +..+.
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~--g~~~ilvDEAhga--h~~F~p~~~~ 345 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL--DVPSIHFDSAWVP--YTHFHPIYQG 345 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh--CCCEEEEeccchh--hhhcCcccCC
Confidence 23555 888888876432111134444432 479999999996633 6766 79999872 33221
Q ss_pred CCCC----CCcEE---EEccccCcCCCCCceEEEEEeCC
Q 021539 270 LALH----RPDLV---LCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 270 l~~l----~~Dfl---~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
.+.+ ++|.+ +-|.|| .+++-+....|-++..
T Consensus 346 ~sam~~~~~aD~~i~~tQStHK-tL~alTQaS~iHvk~~ 383 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHK-MLAAFSQASLIHIKGE 383 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhc-cccccchheeeeecCC
Confidence 1222 35666 999999 7766778888888765
No 276
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.96 E-value=0.00032 Score=69.74 Aligned_cols=151 Identities=9% Similarity=-0.010 Sum_probs=101.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC--hHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE--SDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~--~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
.....++.+-|+.. .++|.||.+.....+..-. ..|++|++.. -+. ...++.+..+.|+++..+..+
T Consensus 81 ~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~----- 150 (409)
T KOG0053|consen 81 VLESGIAALEGAAH---ALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD----- 150 (409)
T ss_pred HHHHHHHHHhCCce---EEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-----
Confidence 45667888999852 4777777655444443333 4788886432 222 345677777889988887654
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEccc
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLD 283 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~H 283 (311)
+.+.++..+.++ +.+|-+- .+=+..+.||++|++ ||++|+.++||.|=+- + ..++.-.+++|.++=|+=
T Consensus 151 -~~~~~~~~i~~~-----t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~-p-~~~~pL~lGADIV~hSaT 222 (409)
T KOG0053|consen 151 -DLKKILKAIKEN-----TKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGS-P-YNQDPLPLGADIVVHSAT 222 (409)
T ss_pred -hHHHHHHhhccC-----ceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCc-c-cccChhhcCCCEEEEeee
Confidence 356677777764 4566543 224789999999976 7999999999999554 3 345555578999999999
Q ss_pred cCcCCCCCc-e-EEEEEe
Q 021539 284 NNTHAQPLK-I-TCLLVR 299 (311)
Q Consensus 284 K~l~G~P~G-i-G~L~vr 299 (311)
| ++|+-.- + |++.++
T Consensus 223 K-yi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 223 K-YIGGHSDVIGGSVVLN 239 (409)
T ss_pred e-eecCCcceeeeEEecC
Confidence 9 5553332 3 444443
No 277
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=97.95 E-value=0.00011 Score=73.97 Aligned_cols=178 Identities=8% Similarity=0.016 Sum_probs=105.8
Q ss_pred cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-----CcC--hHHHHH
Q 021539 114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-----SEE--SDYIKG 186 (311)
Q Consensus 114 ~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-----eh~--~~~~~~ 186 (311)
..-.+|-|...-. +..+.++++||-. . +++|...+.+.+++...+.-.+|+++.+.. -|+ -...+.
T Consensus 65 ~GDD~Y~gdpSv~---~Lee~vael~G~E--~--alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g 137 (467)
T TIGR02617 65 RGDEAYSGSRSYY---ALAESVKNIFGYQ--Y--TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQG 137 (467)
T ss_pred cCCcccccCchHH---HHHHHHHHHhCCc--e--EEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchH
Confidence 3345666666544 4566689999984 2 899998898888887665422444433111 122 011122
Q ss_pred HHHhCCcEEEEEeC--------CC-CCcccCHHHHHhhhhccCCCCCceE--EEEecc-cccchhcHHHHH---H-HHHC
Q 021539 187 FAAQKESKVIAAPE--------TW-LDLRIKGSQLSQNFRRKCKYTPKGL--FSYPVV-VNGTRYSMHWIS---E-AHRN 250 (311)
Q Consensus 187 la~~~G~~V~~vp~--------~~-~~g~id~~~L~~~l~~~~~~~~t~L--Vs~~~~-~tG~i~Pi~~I~---~-a~~~ 250 (311)
.+...|+.+..++. +. .+|.+|+++|++++++.-. .+... ..++.+ .-|+..|++.|. + |+++
T Consensus 138 ~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~ 216 (467)
T TIGR02617 138 HSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY 216 (467)
T ss_pred HHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc
Confidence 23345777665432 11 2688999999999985310 01112 222334 368999998773 3 5899
Q ss_pred CcEEEecccccCc----------cCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 251 AWHVLLDATGLVF----------GEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 251 g~~vlvDAaQsv~----------G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
|+.+|+|||=.+- +....++++ ..+|.+++|+-| =+|.|-| |+|..+++
T Consensus 217 GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK-glgApvG-g~Lag~d~ 281 (467)
T TIGR02617 217 DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK-DAMVPMG-GLLCFKDD 281 (467)
T ss_pred CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC-CCCCccc-ceEEecch
Confidence 9999999965430 223333331 358999999999 5555844 34444443
No 278
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.93 E-value=0.00051 Score=69.89 Aligned_cols=156 Identities=9% Similarity=0.032 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC------------CC-CCCCEEEEccCcChHHH--HHHHHhC-
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY------------PF-FKGNYYLTIISEESDYI--KGFAAQK- 191 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~------------~~-~~Gd~Ils~~eh~~~~~--~~la~~~- 191 (311)
.++.-+.+|+|+|.+. .++|.+|.. |+..++..+ +. .+++.|++.-.-|...+ ..+++.+
T Consensus 149 h~~LE~~LA~f~g~e~---all~sSGy~-AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~ 224 (476)
T PLN02955 149 HRLLESSLADLKKKED---CLVCPTGFA-ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQG 224 (476)
T ss_pred HHHHHHHHHHHHCCCc---EEEECChHH-HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccC
Confidence 3578889999999842 266655554 444333332 11 23445665444342222 1233333
Q ss_pred CcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-
Q 021539 192 ESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ- 267 (311)
Q Consensus 192 G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p- 267 (311)
++++...+-+ |.++|+++++...+ ...+|++..+ ..|.+.|+++|.+ ++++|+.++||=+|+. |..-
T Consensus 225 ~a~~~~f~HN------D~~~Le~~L~~~~~--~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~-Gv~G~ 295 (476)
T PLN02955 225 NVEVFVYRHC------DMYHLNSLLSSCKM--KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGT-FVCGE 295 (476)
T ss_pred CceEEEeCCC------CHHHHHHHHHhCCC--CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccC-ceecC
Confidence 4677666543 57888888865321 2356665555 3799999999976 5889999999999997 5432
Q ss_pred --------cCCCCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539 268 --------LALALHRPDLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 268 --------ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
+++. -++|+++.|+=| -+|.. -|++..++
T Consensus 296 ~G~G~~e~~g~~-~di~ii~~TLsK-A~G~~--GGfi~gs~ 332 (476)
T PLN02955 296 NGGGVAEEFNCE-ADVDLCVGTLSK-AAGCH--GGFIACSK 332 (476)
T ss_pred CCCcHHHHhCCC-CCCcEEEEeCcc-chhcc--CceeecHH
Confidence 2332 368999999999 77732 34444444
No 279
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.90 E-value=0.00024 Score=70.89 Aligned_cols=162 Identities=17% Similarity=0.077 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhcCCCCCC----CEEEEcc-CcChHHHHHHHHhCCcEE
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKE-----AMLMIGESYPFFKG----NYYLTII-SEESDYIKGFAAQKESKV 195 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTe-----alnlv~~s~~~~~G----d~Ils~~-eh~~~~~~~la~~~G~~V 195 (311)
+++.+..+-+.+.-|-+ . |.+.+|+-. ++ ++++.|-...| +.++.+. -|-.|... |.--|.+|
T Consensus 109 ~li~~Lq~~L~~ITG~D--a--vsLQP~AGAqGE~aGl-l~Ir~YHe~rG~~~R~~~LIP~SAHGTNPAS--Aam~G~~V 181 (496)
T COG1003 109 ELIYELQEWLKEITGMD--A--VSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRNICLIPDSAHGTNPAS--AAMAGFKV 181 (496)
T ss_pred HHHHHHHHHHHHhcCCc--e--eeccCCCCcchhhHHH-HHHHHHHHHcCCCcCcEEEeeccccCCChhh--HhhcCceE
Confidence 44567777777777774 3 888876532 23 34444422233 2344333 34444321 22249999
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--c-ccch-hcHHHHHHH-HHCCcEEEecccccCccCc-ccC
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V-NGTR-YSMHWISEA-HRNAWHVLLDATGLVFGED-QLA 269 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~-tG~i-~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~-pld 269 (311)
+.|+.+. +|.||+++|++.+.++ +-+++.. + .|+. ..|.+|+++ |+.|..+..|+|-.= +.. ...
T Consensus 182 V~V~~~~-~G~VDlddLk~k~~~~-------~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlN-A~vG~~r 252 (496)
T COG1003 182 VVVKCDE-NGNVDLDDLRAKAEDN-------LAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLN-AIVGLAR 252 (496)
T ss_pred EEEecCC-CCCccHHHHHHHhccc-------eeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchh-hhhcccc
Confidence 9999986 8999999999998854 4444432 3 5765 568899875 999999999999763 221 123
Q ss_pred CCCCCCcEEEEccccCcC------CCCCceEEEEEeCCCCcc
Q 021539 270 LALHRPDLVLCTLDNNTH------AQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 270 l~~l~~Dfl~~S~HK~l~------G~P~GiG~L~vr~~~~~~ 305 (311)
-.+++.|.+-++.|| -| |+| |+|=+-|+..+...
T Consensus 253 PGd~G~DV~HlNLHK-TF~iPHGGGGP-G~GPvgVk~~L~pf 292 (496)
T COG1003 253 PGDMGFDVVHLNLHK-TFCIPHGGGGP-GAGPVGVKAHLAPF 292 (496)
T ss_pred ccccccceEEeeccc-ccccCCCCCCC-CCCceehHhhcccc
Confidence 345789999999999 54 334 77777777665543
No 280
>PRK08637 hypothetical protein; Provisional
Probab=97.89 E-value=0.00029 Score=68.76 Aligned_cols=166 Identities=11% Similarity=0.041 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcC-----CCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539 129 IQARNRALKHCG-----LSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 129 e~aR~~IA~~Lg-----a~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~ 201 (311)
.+.|+.+++++. .+++ ..+|++|+|+++++.+++..+. .+||.|+.. -.+. .....++...|.++..+|..
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~~~~~~~~~~g~~vv~v~~~ 124 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWG-NYKLTFNTRRGAEIVTYPIF 124 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCc-cHHHHHHHhcCCEEEEeccc
Confidence 357777777652 3322 1358999999999999998874 688988532 1222 22222233468999999873
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHH-----CCcEEEecccccC---ccCcc
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHR-----NAWHVLLDATGLV---FGEDQ 267 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~-----~g~~vlvDAaQsv---~G~~p 267 (311)
.++..++.+++++.++...+ ..+.++.++ ++=||..++.+++.+ |++ ++++++.|-+-.- .+...
T Consensus 125 ~~~~~~d~~~l~~~~~~~~~-~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~ 203 (388)
T PRK08637 125 DEDGGFDTDALKEALQAAYN-KGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYK 203 (388)
T ss_pred CCCCcCCHHHHHHHHHhhcc-CCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccc
Confidence 22445799999888861100 113444333 445999999776532 343 8999999987531 02211
Q ss_pred cCC-C---CCCCcE--E-EEccccCcCCCCCc--eEEEEEe
Q 021539 268 LAL-A---LHRPDL--V-LCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 268 ldl-~---~l~~Df--l-~~S~HK~l~G~P~G--iG~L~vr 299 (311)
.++ . ...-.. + +.|+-| .|+.| | +|.+++.
T Consensus 204 ~~~~~~~~~~~~~vi~i~~~s~SK-~~~~p-GlRlG~~~~~ 242 (388)
T PRK08637 204 ESLFAALANLHSNILAVKLDGATK-EEFVW-GFRVGFITFG 242 (388)
T ss_pred hhhHHHhhcccccceEEEeccccc-cCCCc-ccceEEEEEc
Confidence 111 1 111122 2 238899 66645 5 7888864
No 281
>PLN02624 ornithine-delta-aminotransferase
Probab=97.85 E-value=0.00039 Score=70.37 Aligned_cols=166 Identities=11% Similarity=0.114 Sum_probs=97.1
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCC-----CCCC-EEEEcc-CcCh--HHHHHHH--
Q 021539 123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPF-----FKGN-YYLTII-SEES--DYIKGFA-- 188 (311)
Q Consensus 123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~-----~~Gd-~Ils~~-eh~~--~~~~~la-- 188 (311)
.......+.-++++++++. + .+.|+.+++||+..++. .+.. .+++ .|++.. .+|. .....+.
T Consensus 114 ~~~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~ 189 (474)
T PLN02624 114 FYNDKFPEFAEYLTSMFGY--D--MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCD 189 (474)
T ss_pred cCCHHHHHHHHHHHhhcCC--C--eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCC
Confidence 3344455677778888764 2 49999999998876543 2100 1123 354432 2341 1111110
Q ss_pred --HhCC-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEE
Q 021539 189 --AQKE-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHV 254 (311)
Q Consensus 189 --~~~G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~v 254 (311)
...+ ..+..+|.+ +.+.|++.++... ..++.|.+. .+ .+|.+.| +++|.+ |+++|+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~--~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gill 261 (474)
T PLN02624 190 NEATRGFGPLLPGHLKVDFG------DLDALEKIFEEDG--DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLM 261 (474)
T ss_pred ccccccCCCCCCCceEeCCC------CHHHHHHHHHhCC--CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 0111 112334332 4678888886421 124555553 33 6899999 888865 69999999
Q ss_pred Eeccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 255 LLDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 255 lvDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
++|-+|. + |.. ..+.....+|++++| |.+.|+--.+|++++++++.
T Consensus 262 I~DEv~tG~-GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~ 312 (474)
T PLN02624 262 IADEIQTGL-ARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVM 312 (474)
T ss_pred EEeccccCc-CcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHH
Confidence 9999998 4 422 224445679999997 95544213478888886553
No 282
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=97.84 E-value=0.00089 Score=68.88 Aligned_cols=147 Identities=13% Similarity=0.073 Sum_probs=90.4
Q ss_pred eEEEeCCHHHHHHHHHhcC----CCCCCCEEEEc-cCcChHHHHHH-HHhCCcEEEEEeCCCCC------cccCHHHHHh
Q 021539 147 LVLFVPNYKEAMLMIGESY----PFFKGNYYLTI-ISEESDYIKGF-AAQKESKVIAAPETWLD------LRIKGSQLSQ 214 (311)
Q Consensus 147 ~VvFTsnaTealnlv~~s~----~~~~Gd~Ils~-~eh~~~~~~~l-a~~~G~~V~~vp~~~~~------g~id~~~L~~ 214 (311)
+|+.|+|+|+|+..++.++ -..+||.|+.. -.+. ...... ....|++++.++.+..+ -.++.++|++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~-~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~ 235 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFT-PYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEK 235 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcH-HHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHH
Confidence 6999999999999887763 25689998632 2221 111111 12247777777764211 3578888988
Q ss_pred hhhccCCCCCceEEE-E-ecccccchhcHHHH---HH-HHHC--CcEEEecccccCccCcccCCCCCCC--cEEEEcccc
Q 021539 215 NFRRKCKYTPKGLFS-Y-PVVVNGTRYSMHWI---SE-AHRN--AWHVLLDATGLVFGEDQLALALHRP--DLVLCTLDN 284 (311)
Q Consensus 215 ~l~~~~~~~~t~LVs-~-~~~~tG~i~Pi~~I---~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~~--Dfl~~S~HK 284 (311)
+++++ ++++. + +++=||.+++.+++ .+ |+++ ++++++|=+-.-......++...-+ -+++.|+=|
T Consensus 236 ~~~~~-----~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK 310 (521)
T TIGR03801 236 LRDPS-----IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSK 310 (521)
T ss_pred hcCCC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchh
Confidence 77654 34443 3 44469999996655 33 5554 8999999875420111122211112 377889999
Q ss_pred CcCCCCCc--eEEEEEeCC
Q 021539 285 NTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 285 ~l~G~P~G--iG~L~vr~~ 301 (311)
.||.| | +|+++..++
T Consensus 311 -~fg~~-G~RlG~i~~~~~ 327 (521)
T TIGR03801 311 -YFGAT-GWRLGTIALHKD 327 (521)
T ss_pred -hccCc-hhhhhhhhcCch
Confidence 88743 5 888887654
No 283
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.83 E-value=0.0003 Score=69.54 Aligned_cols=149 Identities=14% Similarity=0.067 Sum_probs=84.0
Q ss_pred eEEEeCCHHHHHHHHHhcCC-C----CCC-CEEEE-ccCcChHHH--HHHHHhCCcEEEEEeCCC--C-CcccCHHHHHh
Q 021539 147 LVLFVPNYKEAMLMIGESYP-F----FKG-NYYLT-IISEESDYI--KGFAAQKESKVIAAPETW--L-DLRIKGSQLSQ 214 (311)
Q Consensus 147 ~VvFTsnaTealnlv~~s~~-~----~~G-d~Ils-~~eh~~~~~--~~la~~~G~~V~~vp~~~--~-~g~id~~~L~~ 214 (311)
.+.|+++++||+..++.... + ++| +.|++ ...+|...+ ..+.........+.|... . ...-+.+++++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 174 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEK 174 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHH
Confidence 59999999999887655321 1 123 34553 333452211 111111111111111110 0 00125678888
Q ss_pred hhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccc
Q 021539 215 NFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLD 283 (311)
Q Consensus 215 ~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~H 283 (311)
.+.++ +..|.+. .+ ..|.+.| +++|.+ |+++|+++++|-+|.-.|..- .+.-...||+++++
T Consensus 175 ~l~~~-----~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g-- 247 (395)
T PRK03715 175 LITDK-----TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG-- 247 (395)
T ss_pred HcCCC-----ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh--
Confidence 88643 4566554 33 5788887 888865 689999999999997213221 12223469999886
Q ss_pred cCcCCCCCceEEEEEeCCCC
Q 021539 284 NNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 284 K~l~G~P~GiG~L~vr~~~~ 303 (311)
|++-|+ --+|+++.+++..
T Consensus 248 K~lg~G-~p~~av~~~~~i~ 266 (395)
T PRK03715 248 KGIGGG-VPLAALLAKAEVA 266 (395)
T ss_pred hhhhCC-cceEEEEEccccc
Confidence 845442 2288888888764
No 284
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=97.82 E-value=0.00067 Score=66.50 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCC-CEEEEcc-CcChHHHHHHHH-----
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKG-NYYLTII-SEESDYIKGFAA----- 189 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~G-d~Ils~~-eh~~~~~~~la~----- 189 (311)
.....+..+.++++++. + .+.|++++++|+..++... ....| +.|++.. .||...+-.+..
T Consensus 78 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~ 153 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGY--D--KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPD 153 (401)
T ss_pred CHHHHHHHHHHHhhcCC--C--EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcc
Confidence 34456788889999874 2 4999999999988766542 01123 3455443 355221111111
Q ss_pred ---hCC---cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEe
Q 021539 190 ---QKE---SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLL 256 (311)
Q Consensus 190 ---~~G---~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlv 256 (311)
..+ ..+..+|.+ +.++|++.+++.. .....|.+- .. .+|.+.| +++|.+ |+++|+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~ 225 (401)
T TIGR01885 154 SRTNFGPYVPGFKKIPYN------NLEALEEALEDHG--PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIA 225 (401)
T ss_pred cccccCCCCCCceEeCCC------CHHHHHHHHHhcC--CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 012 122223321 4678888886421 123444443 22 5899998 888866 6999999999
Q ss_pred cccccCccCc--c--cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 257 DATGLVFGED--Q--LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 257 DAaQsv~G~~--p--ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
|-+|.-.|.. . .+.....+|++++| |++-|+=.-+|+++.++++.
T Consensus 226 DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~ 274 (401)
T TIGR01885 226 DEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVM 274 (401)
T ss_pred echhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHH
Confidence 9998521321 1 22334578999887 95443101267788776543
No 285
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.74 E-value=0.00034 Score=67.85 Aligned_cols=163 Identities=11% Similarity=0.013 Sum_probs=92.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEE-ccCcChHHHHHHH--Hh----CCc--EEEEE
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLT-IISEESDYIKGFA--AQ----KES--KVIAA 198 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils-~~eh~~~~~~~la--~~----~G~--~V~~v 198 (311)
.+.+..+|+.|...++. .+.|++++|||+..++... .+..++.|++ ...+|...+..+. .. .+. .+..+
T Consensus 69 ~~~~~~la~~l~~~~~~-~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T PRK04260 69 NSLQEEVAQKLIGDKDY-LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHF 147 (375)
T ss_pred CHHHHHHHHHHhcCcCC-EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCe
Confidence 35677888766443332 4689999999988655432 1234456664 3444522221111 00 011 11001
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec-c-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--c-
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--L- 268 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--l- 268 (311)
+... .-|.+.+++.+.++ +.+|.+.. + .+|++.| ++++.+ |+++|+++++|.+|.-.|... .
T Consensus 148 ~~~~---~~dl~~l~~~l~~~-----~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~ 219 (375)
T PRK04260 148 SYAI---FNDLNSVKALVNKN-----TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA 219 (375)
T ss_pred EEeC---CCCHHHHHHhcCCC-----eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence 1000 12677888877543 45666643 3 5788876 678855 689999999999985224221 1
Q ss_pred -CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539 269 -ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD 304 (311)
Q Consensus 269 -dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~ 304 (311)
......+|++ ++-| -+| | --+|+++.+++..+
T Consensus 220 ~~~~~~~pdi~--t~sK-~l~-~G~~ig~~~~~~~~~~ 253 (375)
T PRK04260 220 FEHYGIEPDIF--TLAK-GLA-NGVPVGAMLAKSSLGG 253 (375)
T ss_pred hHhhCCCCCEE--Eecc-ccc-CCcceEEEEEcHHHHh
Confidence 1233578966 5689 555 3 12899999876544
No 286
>PRK09275 aspartate aminotransferase; Provisional
Probab=97.71 E-value=0.00073 Score=69.60 Aligned_cols=148 Identities=11% Similarity=0.087 Sum_probs=89.4
Q ss_pred CeEEEeCCHHHHHHHHHhcC----CCCCCCEEEEccCcChHHHHHHHHhC--CcEEEEEeCCCC-CcccCHHHHHhhhhc
Q 021539 146 YLVLFVPNYKEAMLMIGESY----PFFKGNYYLTIISEESDYIKGFAAQK--ESKVIAAPETWL-DLRIKGSQLSQNFRR 218 (311)
Q Consensus 146 y~VvFTsnaTealnlv~~s~----~~~~Gd~Ils~~eh~~~~~~~la~~~--G~~V~~vp~~~~-~g~id~~~L~~~l~~ 218 (311)
.+|+.|+|+|+|+..+..++ -..+||.|+...=...... ..++.. |+++..++.+.. +-.++.++|++++++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~-~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL-EIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHH-HHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 36999999999999887763 2578999863321111111 222222 455555554322 235788999888776
Q ss_pred cCCCCCceEEEE--ecccccchhcHHHH---HH-HH--HCCcEEEecccccCccCcccCCCCC--CCcEEEEccccCcCC
Q 021539 219 KCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AH--RNAWHVLLDATGLVFGEDQLALALH--RPDLVLCTLDNNTHA 288 (311)
Q Consensus 219 ~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~--~~g~~vlvDAaQsv~G~~pldl~~l--~~Dfl~~S~HK~l~G 288 (311)
+ ++++.+ +++=||.+++-+++ .+ |+ ++++++++|-+-.-.......+... .--+++.|+=| .||
T Consensus 241 ~-----tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK-~f~ 314 (527)
T PRK09275 241 S-----IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSK-YFG 314 (527)
T ss_pred C-----CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhh-hcc
Confidence 5 344433 44469999996654 33 43 3599999998753211111121111 12477789999 888
Q ss_pred CCCc--eEEEEEeCC
Q 021539 289 QPLK--ITCLLVRRK 301 (311)
Q Consensus 289 ~P~G--iG~L~vr~~ 301 (311)
. +| +|+++..++
T Consensus 315 m-tG~RlG~i~~~~~ 328 (527)
T PRK09275 315 A-TGWRLGVIALHED 328 (527)
T ss_pred C-cHhHHhhhhcCch
Confidence 3 46 698887765
No 287
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0027 Score=63.30 Aligned_cols=151 Identities=11% Similarity=-0.035 Sum_probs=94.9
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
..-++++.+=|+. +.++| +++-.|+..+..++ +++||+|+...+ +.. .....+.++.|++|.++...
T Consensus 67 ~lE~~~a~LEg~~---~~~af-sSGmaAI~~~~l~l-l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~----- 136 (396)
T COG0626 67 ALEEALAELEGGE---DAFAF-SSGMAAISTALLAL-LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG----- 136 (396)
T ss_pred HHHHHHHHhhCCC---cEEEe-cCcHHHHHHHHHHh-cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC-----
Confidence 4445567777773 22554 55556777766666 467999975443 221 12344456689999887543
Q ss_pred cCHHHHHhhhhc-cCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539 207 IKGSQLSQNFRR-KCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL 282 (311)
Q Consensus 207 id~~~L~~~l~~-~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~ 282 (311)
+.+.+.+.+.+ + +++|-+- .+-+-.+.||.+|++ ||++|+.++||-|=+- |...=.+ ++++|+++=|+
T Consensus 137 -~~~~~~~~~~~~~-----tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat-P~~q~PL-~~GaDIVvhSa 208 (396)
T COG0626 137 -DDEALEAAIKEPN-----TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT-PVLQRPL-ELGADIVVHSA 208 (396)
T ss_pred -ChHHHHHHhcccC-----ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc-ccccChh-hcCCCEEEEec
Confidence 22345555553 4 5676552 334888999999976 6999999999999664 3222122 25899999999
Q ss_pred ccCcCCCCCceEEEEE
Q 021539 283 DNNTHAQPLKITCLLV 298 (311)
Q Consensus 283 HK~l~G~P~GiG~L~v 298 (311)
=|++-|.=-=+|.+++
T Consensus 209 TKyl~GHsDvl~G~v~ 224 (396)
T COG0626 209 TKYLGGHSDVLGGVVL 224 (396)
T ss_pred cccccCCcceeeeEEe
Confidence 9944442222566655
No 288
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=97.64 E-value=0.00078 Score=66.88 Aligned_cols=170 Identities=15% Similarity=0.100 Sum_probs=105.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEE
Q 021539 121 GNFISIPEIQARNRALKHCGL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAA 198 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~v 198 (311)
|.=..+.....++.++.+.|. +++ .+|..|.||.+|+-....++ +.+||+|+..-=..-.+. ...+--|.+.+++
T Consensus 68 ~~G~p~L~~aL~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l-~~~GDeVii~eP~fd~Y~-~~~~maG~tpv~v 144 (420)
T KOG0257|consen 68 GYGLPQLRKALAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGL-LNPGDEVIVFEPFFDCYI-PQVVMAGGTPVFV 144 (420)
T ss_pred cCCchHHHHHHHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHH-cCCCCEEEEecCcchhhh-hHHhhcCCcceee
Confidence 333444445666677776664 232 25999999999998776666 478999852211111111 1112237777787
Q ss_pred eCC-------CCCcccCHHHHHhhhhccCCCCCceEEE-EecccccchhcHH---HHHH-HHHCCcEEEecccccC---c
Q 021539 199 PET-------WLDLRIKGSQLSQNFRRKCKYTPKGLFS-YPVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLV---F 263 (311)
Q Consensus 199 p~~-------~~~g~id~~~L~~~l~~~~~~~~t~LVs-~~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv---~ 263 (311)
|.. .++..+|.++|+..+.++++ .+|. -+++=||.+.+=+ +|++ |+++|.+++.|=+=-. .
T Consensus 145 ~~~~~~g~~~s~~~~~D~~~le~~~t~kTk----~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d 220 (420)
T KOG0257|consen 145 PLKPKEGNVSSSDWTLDPEELESKITEKTK----AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYD 220 (420)
T ss_pred ccccccccccCccccCChHHHHhhccCCcc----EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhC
Confidence 765 34567899999999998742 3333 3566799998855 4555 6899999999976322 0
Q ss_pred cCcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539 264 GEDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVR 299 (311)
Q Consensus 264 G~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr 299 (311)
|..-+.+..+ ..-.-+.|+-| .|| -+| +|-++..
T Consensus 221 ~~~h~r~aslPgm~ertitvgS~gK-tf~-~TGWrlGW~igp 260 (420)
T KOG0257|consen 221 GNKHIRIASLPGMYERTITVGSFGK-TFG-VTGWRLGWAIGP 260 (420)
T ss_pred CCcceeeecCCchhheEEEeccccc-eee-eeeeeeeeeech
Confidence 2211222222 24456789999 888 566 6766663
No 289
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=97.62 E-value=0.00053 Score=68.07 Aligned_cols=149 Identities=13% Similarity=0.203 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKE---AMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR 206 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTe---alnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~ 206 (311)
+..+.+|++-+-+. .++|+|..-. -+-+++.-+ +|..|+|..+.|.+.+... +..++.-.+..-+
T Consensus 220 ~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~l---pgcei~SD~gNHASMI~GI-rns~v~K~IFrHN----- 287 (570)
T KOG1360|consen 220 RLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKL---PGCEIFSDEGNHASMIQGI-RNSRVPKHIFRHN----- 287 (570)
T ss_pred hHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHC---CCcEEeccccchHHHHHHh-hhcCCcceeeccC-----
Confidence 45566788776543 3888875332 134555544 5788888777664443322 2234332233322
Q ss_pred cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---CC-----CCCC
Q 021539 207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---LA-----LHRP 275 (311)
Q Consensus 207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---l~-----~l~~ 275 (311)
|+++|+++|..-.+ .-.++|++-.+ ..|.+-||+||.. +|++|++.++|-+|++ |..--. +. ..++
T Consensus 288 -D~~hL~~lL~~~~~-svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAV-GlYG~rGaGvgerdGvm~kv 364 (570)
T KOG1360|consen 288 -DLDHLEQLLQSSPK-SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAV-GLYGPRGAGVGERDGVMHKV 364 (570)
T ss_pred -CHHHHHHHHHhCCC-CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhh-ccccCCCCCccccCCcchhh
Confidence 57888888876433 23579999756 4999999999966 6999999999999998 765332 22 1468
Q ss_pred cEEEEccccCcCCCCCceEEEE
Q 021539 276 DLVLCTLDNNTHAQPLKITCLL 297 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~ 297 (311)
|.++.+.-| -||. +|.-+
T Consensus 365 DiIsGTLgK-afGc---VGGYI 382 (570)
T KOG1360|consen 365 DIISGTLGK-AFGC---VGGYI 382 (570)
T ss_pred hhcccchhh-hccc---cccee
Confidence 999999999 8883 55544
No 290
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0017 Score=63.75 Aligned_cols=161 Identities=17% Similarity=0.155 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539 128 EIQARNRALKHCG-LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDL 205 (311)
Q Consensus 128 le~aR~~IA~~Lg-a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g 205 (311)
..+.|+.+|++.| .+++. |+.+.|++|.+.++.+.+. .+||.++... .. +. -...++..|+++..+|... .
T Consensus 59 ~~~l~~a~a~~~~~~~~~~--V~~gnGsde~i~~l~~~~~-~~gd~vl~~~Ptf-~~-Y~~~a~~~g~~~~~v~~~~--~ 131 (356)
T COG0079 59 YRELRAALAEYYGVVDPEN--VLVGNGSDELIELLVRAFV-EPGDTVLIPEPTF-SM-YEIAAQLAGAEVVKVPLKE--F 131 (356)
T ss_pred HHHHHHHHHHHhCCCCcce--EEEcCChHHHHHHHHHHhh-cCCCEEEEcCCCh-HH-HHHHHHhcCCeEEEecccc--c
Confidence 3479999999999 65544 8889999999999999884 5778875321 11 11 1233556799999999863 5
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHHHHH---CCcEEEeccccc--CccCcccCCCCCCCc--E
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISEAHR---NAWHVLLDATGL--VFGEDQLALALHRPD--L 277 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~a~~---~g~~vlvDAaQs--v~G~~pldl~~l~~D--f 277 (311)
.+|.+.+.+.+++++ .-++.+ +.+=||...+.++|.++.+ .+++++||-|=. . +..-+++-. ..+ +
T Consensus 132 ~~d~~~~~~~~~~~~----~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~~~~~l~~-~~~nli 205 (356)
T COG0079 132 RLDLDAILAAIRDKT----KLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS-PESSLELLK-YPPNLI 205 (356)
T ss_pred ccCHHHHHHhhhcCC----CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cchhhhhcc-CCCCEE
Confidence 678888888887642 223333 3446999999999866432 389999998622 2 211122211 244 6
Q ss_pred EEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539 278 VLCTLDNNTHAQPLK--ITCLLVRRKSF 303 (311)
Q Consensus 278 l~~S~HK~l~G~P~G--iG~L~vr~~~~ 303 (311)
+.=|+=| .||.| | +|+.+..++++
T Consensus 206 vlRTfSK-a~gLA-GlRlGy~ia~~~~i 231 (356)
T COG0079 206 VLRTFSK-AFGLA-GLRVGYAIANPELI 231 (356)
T ss_pred EEEecHH-hhhcc-hhceeeccCCHHHH
Confidence 6678999 99854 5 78887776554
No 291
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0035 Score=61.79 Aligned_cols=183 Identities=15% Similarity=0.113 Sum_probs=116.5
Q ss_pred CCccccccccchhHHHHh----cCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC
Q 021539 96 FNDLDKSQLEPSRLLDIL----SKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG 170 (311)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l----~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G 170 (311)
+|=.|+.=+-+..+.+.+ .+- -.|+ .......+....-..+--+-......|+|+++.--++.++++++. ++|
T Consensus 30 mWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~g 107 (388)
T COG1168 30 MWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPG 107 (388)
T ss_pred eeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCC
Confidence 343444433333344444 333 3555 112223345555566655554444459999999999999999985 689
Q ss_pred CEEE--EccCcChHHHHHHHHhCCcEEEEEeCCCCCccc--CHHHHHhhhhccCCCCCceEE--EEecccccchhcHHHH
Q 021539 171 NYYL--TIISEESDYIKGFAAQKESKVIAAPETWLDLRI--KGSQLSQNFRRKCKYTPKGLF--SYPVVVNGTRYSMHWI 244 (311)
Q Consensus 171 d~Il--s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i--d~~~L~~~l~~~~~~~~t~LV--s~~~~~tG~i~Pi~~I 244 (311)
|.|+ ++.=++ .....+..|-++...|.-.++++. |.++|++.+.+.. ++|+ |=+|+=+|++..-+++
T Consensus 108 d~Vvi~tPvY~P---F~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~----vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 108 DGVVIQTPVYPP---FYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER----VKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred CeeEecCCCchH---HHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC----ccEEEEeCCCCCCCccccHHHH
Confidence 9875 433222 222234568899888876556655 9999999998642 3444 3367779999887765
Q ss_pred ---HH-HHHCCcEEEecccccC---ccCcccCCCCCCC-----cEEEEccccCcCC
Q 021539 245 ---SE-AHRNAWHVLLDATGLV---FGEDQLALALHRP-----DLVLCTLDNNTHA 288 (311)
Q Consensus 245 ---~~-a~~~g~~vlvDAaQsv---~G~~pldl~~l~~-----Dfl~~S~HK~l~G 288 (311)
.+ |.++|+.|+.|=.|+= .|+-.+.+..+.+ -+.+.|.-| -|.
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSK-tFN 235 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASK-TFN 235 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccc-ccc
Confidence 44 6899999999999972 2655555544433 467777799 554
No 292
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.60 E-value=0.002 Score=63.44 Aligned_cols=158 Identities=13% Similarity=0.050 Sum_probs=89.1
Q ss_pred HHHHHHHHcCCCCCCCeEEEe--CCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHH----------HHhCCcEEEEE
Q 021539 131 ARNRALKHCGLSEDEYLVLFV--PNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF----------AAQKESKVIAA 198 (311)
Q Consensus 131 aR~~IA~~Lga~~dey~VvFT--snaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~l----------a~~~G~~V~~v 198 (311)
.-+..|+.||+.. -+|=. -|+|+|+-+.+.++ +++||++++..+-+-+.+.+. .+.+|++...+
T Consensus 59 le~iyA~vfgaE~---ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v 134 (403)
T PF06838_consen 59 LERIYADVFGAED---ALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV 134 (403)
T ss_dssp HHHHHHHHCT-SE---EEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred HHHHHHHHhCchh---hhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence 3344688999842 24422 27899999999887 589999987766542222222 14568899999
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccc----hhcHHHHHH----HH--HCCcEEEecccccC--ccCc
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGT----RYSMHWISE----AH--RNAWHVLLDATGLV--FGED 266 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~----i~Pi~~I~~----a~--~~g~~vlvDAaQsv--~G~~ 266 (311)
|... +|.+|.+.+++.++++ +++|.+.= +.|. -+.+++|.+ +| +.++.++||=+=.= --..
T Consensus 135 ~L~~-dg~~D~~~i~~~~~~~-----tk~v~IQR-SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E 207 (403)
T PF06838_consen 135 PLTE-DGTIDWEAIKKALKPN-----TKMVLIQR-SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE 207 (403)
T ss_dssp -B-T-TSSB-HHHHHHHHHTT-----EEEEEEE--S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-
T ss_pred eecC-CCCcCHHHHHHhhccC-----ceEEEEec-CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC
Confidence 9875 7999999999999965 68887642 3332 233455533 34 36899999975221 0123
Q ss_pred ccCCCCCCCcEEEEccccCcCCCCCce-EEEEEeCCC
Q 021539 267 QLALALHRPDLVLCTLDNNTHAQPLKI-TCLLVRRKS 302 (311)
Q Consensus 267 pldl~~l~~Dfl~~S~HK~l~G~P~Gi-G~L~vr~~~ 302 (311)
|.+ .++|.++.|.=|+..|+=.=+ |.+.-|+++
T Consensus 208 P~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~l 241 (403)
T PF06838_consen 208 PTE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDL 241 (403)
T ss_dssp GGG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHH
T ss_pred ccc---cchhheeccceeCCCCCccCcCCEEechHHH
Confidence 333 589999999999666642223 444444444
No 293
>PTZ00376 aspartate aminotransferase; Provisional
Probab=97.59 E-value=0.00077 Score=66.21 Aligned_cols=161 Identities=11% Similarity=-0.052 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcC------CCCCCCeEEE--eCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEE
Q 021539 129 IQARNRALKHCG------LSEDEYLVLF--VPNYKEAMLMIGE---SYPFFKGNYYLTII-SEESDYIKGFAAQKESKVI 196 (311)
Q Consensus 129 e~aR~~IA~~Lg------a~~dey~VvF--TsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~ 196 (311)
.+.|+.||+++. ++++ +|++ |.|+++|+.++.. .+ ..+||.|+... .+. . ....++..|++++
T Consensus 75 ~~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~-~-~~~~~~~~G~~~~ 149 (404)
T PTZ00376 75 QSFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWP-N-HVNIFKSAGLNVK 149 (404)
T ss_pred HHHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCch-h-HHHHHHHcCCcee
Confidence 378888998762 2333 4885 8999999887754 44 46899886322 221 1 2334556799999
Q ss_pred EEeCCC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCccCcc--
Q 021539 197 AAPETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGEDQ-- 267 (311)
Q Consensus 197 ~vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~~p-- 267 (311)
.+|... ++..++.+.+++.++... ..+.++.+ +++=||..++.+++. + |+++++++++|-+=.-.-...
T Consensus 150 ~v~l~~~~~~~~d~~~l~~~~~~~~--~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 227 (404)
T PTZ00376 150 EYRYYDPKTKGLDFDGMLEDLRTAP--NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLD 227 (404)
T ss_pred eccccCcccCCcCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHH
Confidence 999732 235688999988886421 11344443 344599999987653 3 578999999998732100000
Q ss_pred ------cCCCCCC-CcEEEEccccCcCCCC-CceEEEE
Q 021539 268 ------LALALHR-PDLVLCTLDNNTHAQP-LKITCLL 297 (311)
Q Consensus 268 ------ldl~~l~-~Dfl~~S~HK~l~G~P-~GiG~L~ 297 (311)
..+.... -=+++.|+=| .||.| -.+|.++
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK-~~~~~GlRvG~~~ 264 (404)
T PTZ00376 228 KDAYAIRLFAERGVEFLVAQSFSK-NMGLYGERIGALH 264 (404)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCC-cccccccccceEE
Confidence 0111111 1278889999 88833 2388874
No 294
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0019 Score=66.59 Aligned_cols=164 Identities=14% Similarity=0.051 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-C---
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW-L--- 203 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~-~--- 203 (311)
+.+|.+.+|+.+|++. .-..+.|+|.|+..+..+. ..+||.|+..-.-|.+....+.. .|+.-+++.... +
T Consensus 72 i~eAqe~aA~~fgAd~---tyFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~glil-aGa~Pvyl~p~~np~~g 146 (557)
T COG1982 72 IKEAQELAARVFGADH---TYFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLIL-AGATPVYLEPSRNPLYG 146 (557)
T ss_pred HHHHHHHHHHHhCCCc---eEEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHHH-cCCceEEecCCCCcccc
Confidence 3489999999999963 2455788889999998887 47899998665433222322222 366655643222 1
Q ss_pred -CcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC-----CCCCC
Q 021539 204 -DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL-----ALHRP 275 (311)
Q Consensus 204 -~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl-----~~l~~ 275 (311)
-|-|+.+.+++.+.++.. ..+++.++-- --|+..++++|.+ +|..++++.+|-+|-+ -...-++ .+.+.
T Consensus 147 i~ggI~~~~~~~~l~~~~~--~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~-~~~~~~~l~~~~~~~~~ 223 (557)
T COG1982 147 IIGGIPLETFKEALLAHPD--AEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPA-HFDFSPMLPESALNGGA 223 (557)
T ss_pred ccCCCCHHHHHHHHHhChh--hheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcc-cccccccCcchhhhcCc
Confidence 245788999876654321 1144444422 4799999999965 7999999999999876 3222221 12578
Q ss_pred cEEEEccccCcCCCCCceEEEEEeC
Q 021539 276 DLVLCTLDNNTHAQPLKITCLLVRR 300 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~vr~ 300 (311)
||++=|.|| .+|+=+-.-.|.++.
T Consensus 224 ~~~tqS~HK-~l~alSQaS~iHv~~ 247 (557)
T COG1982 224 DFVTQSTHK-LLAALSQASMIHVKD 247 (557)
T ss_pred eEEEechhh-hhhhhhhhHHHhhCC
Confidence 999999999 877544455666664
No 295
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.56 E-value=0.00034 Score=69.72 Aligned_cols=199 Identities=17% Similarity=0.116 Sum_probs=118.9
Q ss_pred CccccccccchhHHHHhcCCCCcc---hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHH----h-cCCC-
Q 021539 97 NDLDKSQLEPSRLLDILSKKTSFK---GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIG----E-SYPF- 167 (311)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~~ss~~---G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~----~-s~~~- 167 (311)
.++|-..|... ++--.+|.+-|+ ..-..-+.+++-.++-+..|-+.. -+=||+||++-++.-+. . .+|-
T Consensus 110 ~glD~~~Lag~-wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~ 187 (510)
T KOG0629|consen 110 SGLDPIGLAGE-WLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEV 187 (510)
T ss_pred cCCCHHHHHHH-HHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchh
Confidence 45666666555 333334444443 111111223455555566676653 23589998887654322 2 1221
Q ss_pred C-CC-----CEEE-EccCcChHHHHHHHHhCC---cEEEEEeCCCCCcccCHHHHHhhhhcc-CCCCCceEEEEecc--c
Q 021539 168 F-KG-----NYYL-TIISEESDYIKGFAAQKE---SKVIAAPETWLDLRIKGSQLSQNFRRK-CKYTPKGLFSYPVV--V 234 (311)
Q Consensus 168 ~-~G-----d~Il-s~~eh~~~~~~~la~~~G---~~V~~vp~~~~~g~id~~~L~~~l~~~-~~~~~t~LVs~~~~--~ 234 (311)
+ .| .-|+ +.-+.| -++...+.-.| -.|+.|+.+. .|.+.+++|++.|-.. .+.-..-+|++++- +
T Consensus 188 K~~Gm~~~p~lilFtSeesH-YSi~kaAa~lg~gtd~c~~v~t~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV 265 (510)
T KOG0629|consen 188 KTKGMFALPPLILFTSEESH-YSIKKAAAFLGLGTDHCIKVKTDE-RGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTV 265 (510)
T ss_pred hhhhhhcCCcEEEEecccch-hhHHHHHHHhccCCceeEEecccc-cCccchHHHHHHHHHHHhcCCCCeEEEecCCcee
Confidence 1 22 2233 333323 22433344445 4677888886 7899999999777542 22112456777655 6
Q ss_pred ccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC------CC-CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 235 NGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL------AL-HRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 235 tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl------~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.|..-|+..|+. |.+++.++|||||=.- | .-++. .- -++|.++-++|| +.|+|.-+++++.|.+-
T Consensus 266 ~GAFDdL~~iadiC~k~~lWmHvDAAwGG-g-lLmS~k~R~kl~Giera~SvtwnpHK-~~gaplqCsa~l~r~~g 338 (510)
T KOG0629|consen 266 LGAFDDLNGIADICEKHKLWMHVDAAWGG-G-LLMSRKHRHKLTGIERANSVTWNPHK-LMGAPLQCSAFLTREEG 338 (510)
T ss_pred eeccCcHHHHHHHHHhcCEEEEeeccccc-c-cccChhhHhhccCccccCceeecHHH-hhcCcchhhHHHHHHHH
Confidence 899999999987 6889999999998443 2 22221 11 258999999999 88989888888777543
No 296
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.53 E-value=0.00095 Score=67.09 Aligned_cols=157 Identities=14% Similarity=0.080 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKE---AMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET 201 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTe---alnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~ 201 (311)
+.+-+.-|+++.|.+-.. .-.-.++|. |+.++.+... ++++.|+ +..-|+. ..++..+.-.|++|+.+|.+
T Consensus 112 lfe~Qs~i~eLTGmdvaN--aSlyd~atA~aEa~~ma~r~~~-~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~ 188 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVAN--ASLYDGATAAAEAMLMAVRATK-RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLD 188 (429)
T ss_dssp HHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHT-T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BB
T ss_pred HHHHHHHHHHhhCCCccC--CCCCChhHHHHHHHHHHHHhcc-cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccc
Confidence 457888899999985211 123346655 4544444322 2334554 5556773 34555566679999999887
Q ss_pred CCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-cCCCCCCCcEE
Q 021539 202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-LALALHRPDLV 278 (311)
Q Consensus 202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-ldl~~l~~Dfl 278 (311)
. ++..+ .++ +.-|.++.- ..|.+-++++|.+ +|++|+++++ ++-.. ...- -.-.++++|.+
T Consensus 189 ~-~~~~d--------~~~-----~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~-aL~~l~~Pge~GADI~ 252 (429)
T PF02347_consen 189 E-DGTTD--------DDD-----TAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPN-ALGGLKSPGEYGADIV 252 (429)
T ss_dssp T-TCSB---------STT-----EEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCC-GCCTC--GGGGT-SEE
T ss_pred c-cCCcc--------ccC-----eEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHH-HHhCcCChhhcCccEE
Confidence 5 44443 222 344443322 6899999999976 6999999887 65443 2111 12245789999
Q ss_pred EEccccCc-----CCCCCceEEEEEeCCCCcc
Q 021539 279 LCTLDNNT-----HAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 279 ~~S~HK~l-----~G~P~GiG~L~vr~~~~~~ 305 (311)
+.+ ||.| ||+| |.|++-+|++....
T Consensus 253 vg~-~Q~fg~p~~~GGP-~~G~~a~~~~l~r~ 282 (429)
T PF02347_consen 253 VGE-HQTFGIPMGFGGP-GAGFFAVREDLVRQ 282 (429)
T ss_dssp EEC-CTTTT---CCC-S---EEEEE-GGGGGG
T ss_pred eeC-CCCCcccCCCCCC-CeeeEEEhhhhhhh
Confidence 555 7732 3446 89999999886544
No 297
>PLN02672 methionine S-methyltransferase
Probab=97.52 E-value=0.0034 Score=69.47 Aligned_cols=167 Identities=12% Similarity=0.034 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-Cc
Q 021539 128 EIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-DL 205 (311)
Q Consensus 128 le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~g 205 (311)
.+..++.+++..|.+.+ +.+|++|+|+++++..+...+. .+||.|+...--... ....++..|+++..+|.+.. +-
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl-~pGD~VLVp~PtY~~-Y~~~a~~~Ga~vv~Vpl~~e~gf 813 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV-QEGGTLCFPAGSNGT-YVSAAKFLKANFRRIPTKSSDGF 813 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCChHH-HHHHHHHcCCEEEEEecccccCC
Confidence 45777888888888654 2369999999999999888773 688988633211112 22335566999999998632 34
Q ss_pred ccCHHHHHhhhhccCCCCCceE-EEEec-ccccchhcHHHHHH----HHHCCcEEEecccccC---ccCc--ccCCC---
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGL-FSYPV-VVNGTRYSMHWISE----AHRNAWHVLLDATGLV---FGED--QLALA--- 271 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~L-Vs~~~-~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv---~G~~--pldl~--- 271 (311)
.++.+.|++.+++.. ...+ ++.+. +=||.+++-+++.+ |+++|+++++|-+.+- .+.. +.++.
T Consensus 814 ~lD~d~Le~al~~~~---~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 814 KLTAKTLASTLETVK---KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred CCCHHHHHHHhccCC---CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 678889998886521 1233 34453 56999999887633 5789999999998761 0211 11111
Q ss_pred -CCC---C--c-EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 272 -LHR---P--D-LVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 272 -~l~---~--D-fl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
.+. . . +++.|+=| -|+.| | +|+++..++
T Consensus 891 ~~~~~~sks~nVIvL~SfSK-kf~lp-GLRIGylIap~~ 927 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLST-ELLSG-GHEFGFLALNDS 927 (1082)
T ss_pred HHhccccCCceEEEEeCcHH-hhccH-HHHheeEEeCCH
Confidence 111 1 1 35558888 67644 5 899987543
No 298
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=97.51 E-value=0.0032 Score=61.86 Aligned_cols=157 Identities=11% Similarity=0.079 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCC---CCC-CEEE-EccCcChHHH--HHHH------H--
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPF---FKG-NYYL-TIISEESDYI--KGFA------A-- 189 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~---~~G-d~Il-s~~eh~~~~~--~~la------~-- 189 (311)
..+.-+.++++++. + .+.|+.+++||+..++.- +.. ..+ +.|+ ....+|...+ ..+. .
T Consensus 84 ~~~l~~~l~~~~~~--~--~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 84 ALRLAKKLIDATFA--E--RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred HHHHHHHHHhhCCC--C--EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 34666777777654 2 499999999987765542 210 012 3454 3333452211 1110 0
Q ss_pred -hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchh-c----HHHHHH-HHHCCcEEEeccccc
Q 021539 190 -QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRY-S----MHWISE-AHRNAWHVLLDATGL 261 (311)
Q Consensus 190 -~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~-P----i~~I~~-a~~~g~~vlvDAaQs 261 (311)
.....+..+|.+ |.+++++.+.++ +++|.+ +.+.+|..+ | +++|.+ |+++|+++++|=+|+
T Consensus 160 ~~~~~~~~~~~~~------d~~~l~~~l~~~-----~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 228 (403)
T PRK05093 160 GPKPADITHVPFN------DLAAVKAVIDDH-----TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT 228 (403)
T ss_pred CCCCCCcEEeCCC------CHHHHHHHhcCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 001123333332 567888888643 445444 444454443 3 667755 799999999999988
Q ss_pred CccCcc--c--CCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 262 VFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 262 v~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
-.|... . ......+|+++|| | -+| | | +|+++.++++.+
T Consensus 229 g~g~~g~~~~~~~~~~~pdi~s~s--K-~l~-~-G~rig~vv~~~~i~~ 272 (403)
T PRK05093 229 GMGRTGDLFAYMHYGVTPDILTSA--K-ALG-G-GFPIGAMLTTAEIAS 272 (403)
T ss_pred CCCCCccchhhhhcCCCCCEEEec--c-ccc-C-CcceEEEEEcHHHHh
Confidence 214322 1 1223568987775 9 666 4 6 999998876543
No 299
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.50 E-value=0.0012 Score=65.60 Aligned_cols=172 Identities=14% Similarity=0.119 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCC-CEEEEc-cCcChH--HHHHHHHhC---
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKG-NYYLTI-ISEESD--YIKGFAAQK--- 191 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~G-d~Ils~-~eh~~~--~~~~la~~~--- 191 (311)
.....+..+++++.+... ...|.|+.++|||+..++. .+. -.+| .+|++. ..+|.. ....+....
T Consensus 84 ~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~ 161 (423)
T PRK05964 84 HEPAERLAQRLVALTPGG--LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMH 161 (423)
T ss_pred CHHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccc
Confidence 334445666777776421 2259999999998876544 220 0122 456543 345521 111111110
Q ss_pred ----C--cEEEEEeCCCCC-cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCcEEEe
Q 021539 192 ----E--SKVIAAPETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAWHVLL 256 (311)
Q Consensus 192 ----G--~~V~~vp~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~~vlv 256 (311)
+ ..+..+|....+ ...+.+++++.+++.. .....|.+ +. + ..|.+.| +++|.+ |+++|+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~--~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~ 239 (423)
T PRK05964 162 ALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA--GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIF 239 (423)
T ss_pred ccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC--CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 0 123344443211 1122677778886421 12344443 42 3 4677775 566655 6899999999
Q ss_pred ccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539 257 DATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD 304 (311)
Q Consensus 257 DAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~ 304 (311)
|-+|. + |..- .+.....+|+++++ |++.| . -.+|+++.+++..+
T Consensus 240 DEv~tg~-gr~G~~~a~~~~~v~pDi~~~~--K~l~g-G~~p~~av~~~~~i~~ 289 (423)
T PRK05964 240 DEIATGF-GRTGTLFACEQAGVSPDIMCLS--KGLTG-GYLPLAATLCTAEIFE 289 (423)
T ss_pred echhhCC-CcCcchhHHHhcCCCCCeeeee--hhhhc-CcccceEEEEcHHHHH
Confidence 99996 3 4221 12333579999887 95544 3 24888888876544
No 300
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=97.42 E-value=0.0016 Score=62.94 Aligned_cols=159 Identities=13% Similarity=0.059 Sum_probs=86.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEc-cCcChHHH--HHHHHh----CCc-----EEE
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTI-ISEESDYI--KGFAAQ----KES-----KVI 196 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~-~eh~~~~~--~~la~~----~G~-----~V~ 196 (311)
+.+..+++.++.......++|++++++|+..+.... .+..++.|++. ..+|.... ..+... .+. .+.
T Consensus 71 ~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (377)
T PRK02936 71 SLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFT 150 (377)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCce
Confidence 345555555553211125999999999988776632 11223456533 34442111 111100 010 112
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecccccCccCc--c
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGED--Q 267 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~--p 267 (311)
.+|.+ +.+++++.+.++ +++|.+... ..|...+ +++|.+ |+++|+++++|-+|.-.|.. +
T Consensus 151 ~~~~~------d~~~l~~~~~~~-----~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~ 219 (377)
T PRK02936 151 HVPFN------DIKALKEVMNEE-----VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL 219 (377)
T ss_pred EeCCC------CHHHHHHhccCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence 22221 467888888653 456665433 3455432 777755 68999999999998621432 2
Q ss_pred cCC--CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 268 LAL--ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 268 ldl--~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+.+ ....+|.+ ++-| -+| + | +|+++.+++..+
T Consensus 220 ~~~~~~~~~~di~--t~sK-~l~-~-G~~ig~v~~~~~~~~ 255 (377)
T PRK02936 220 FAYEQFGLDPDIV--TVAK-GLG-N-GIPVGAMIGKKELGT 255 (377)
T ss_pred hHHHhhCCCCcEE--EEcc-ccc-C-CCccEEEEEcHHHHh
Confidence 221 12457865 4689 666 3 5 788888766543
No 301
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=97.27 E-value=0.0097 Score=58.52 Aligned_cols=161 Identities=14% Similarity=0.085 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-----CCC-CEEEE-ccCcChHHH--HHHHHh----
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-----FKG-NYYLT-IISEESDYI--KGFAAQ---- 190 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-----~~G-d~Ils-~~eh~~~~~--~~la~~---- 190 (311)
.....+.-++++++++. + .+.|+++++||+..++... .+ ..| +.|++ ...+|...+ ..+...
T Consensus 76 ~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~ 151 (397)
T TIGR03246 76 NEPVLRLAKKLVDATFA--D--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYS 151 (397)
T ss_pred CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 34455778888888764 2 4999999999987765532 01 012 34553 334452211 111100
Q ss_pred C-----CcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecc
Q 021539 191 K-----ESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDA 258 (311)
Q Consensus 191 ~-----G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDA 258 (311)
. ...+..+|.+ |.+++++.+.++ +++|.+ +.+ ..|.+. | +++|.+ |+++|+++++|=
T Consensus 152 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 220 (397)
T TIGR03246 152 QGFAPLPGGIKHAPYN------DLAAAKALISDK-----TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDE 220 (397)
T ss_pred cCCCCCCCceEEeCCC------CHHHHHHHhccC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0 0123333332 568888888643 455554 444 456553 3 566655 689999999999
Q ss_pred cccCccCccc----CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539 259 TGLVFGEDQL----ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD 304 (311)
Q Consensus 259 aQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~ 304 (311)
+|.-.|...- ......+|++++ =|.+-| .| +|+++.+++..+
T Consensus 221 v~tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lggG~p--igav~~~~~i~~ 267 (397)
T TIGR03246 221 VQTGVGRTGELYAYMHYGVTPDILTS--AKALGGGFP--IGAMLTTTEIAA 267 (397)
T ss_pred hhhcCCccccchhhhhcCCCCCEEEe--ehhhhCCcc--eeEEEEcHHHHH
Confidence 9942122211 111236898865 574532 23 788888876543
No 302
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.22 E-value=0.0074 Score=59.30 Aligned_cols=161 Identities=10% Similarity=0.065 Sum_probs=91.2
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChH--HHHHHH----HhCCc-
Q 021539 123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESD--YIKGFA----AQKES- 193 (311)
Q Consensus 123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~--~~~~la----~~~G~- 193 (311)
+......+.-++++++++. + .+.|+.++|||+..++.......| ++|++. ..+|.. ....+. .+.++
T Consensus 63 ~~~~~~~~la~~l~~~~~~--~--~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~ 138 (364)
T PRK04013 63 FEHEEKEEMLEELSKWVNY--E--YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFE 138 (364)
T ss_pred cCCHHHHHHHHHHHhhcCC--C--EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCC
Confidence 3344455666778888764 2 399999999998876553221234 566533 334421 111100 01111
Q ss_pred ----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecccccC
Q 021539 194 ----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDATGLV 262 (311)
Q Consensus 194 ----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAaQsv 262 (311)
.+..+|.+ +.+.+++.+.++ ++.|.+ +.+ ..|.+. | ++++.+ |+++|+++++|-+|.-
T Consensus 139 p~~~~~~~~~~~------d~~~l~~~i~~~-----~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG 207 (364)
T PRK04013 139 PLVPGFKHIPFN------DVEAAKEAITKE-----TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSG 207 (364)
T ss_pred CCCCCcEEecCC------CHHHHHHHhcCC-----cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence 12333332 356777777643 344443 333 345554 3 777865 6999999999999982
Q ss_pred --ccCc-ccCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCC
Q 021539 263 --FGED-QLALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKS 302 (311)
Q Consensus 263 --~G~~-pldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~ 302 (311)
+|+. -...-...||++++ =|++-|+ | +|+++.+++.
T Consensus 208 ~RtG~~~a~~~~gv~PDiv~~--gK~lggG~P--~~a~~~~~~~ 247 (364)
T PRK04013 208 LRTGKFLAIEHYKVEPDIVTM--GKGIGNGVP--VSLTLTNFDV 247 (364)
T ss_pred CCCCchhHHHhcCCCCCEEEe--cccccCCce--eEEEEecccc
Confidence 1321 01122356999998 4755543 4 6888888664
No 303
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.20 E-value=0.018 Score=57.19 Aligned_cols=169 Identities=11% Similarity=0.009 Sum_probs=87.1
Q ss_pred HHHHHHHHHHcCCCC-CCCeEEEe-CCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHH----HhC--C---c
Q 021539 129 IQARNRALKHCGLSE-DEYLVLFV-PNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFA----AQK--E---S 193 (311)
Q Consensus 129 e~aR~~IA~~Lga~~-dey~VvFT-snaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la----~~~--G---~ 193 (311)
.+.-+++++.+..+. ....+.|+ .+++||+..++.- ..+....+|++.. .+|.. ....+. .+. + .
T Consensus 81 ~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 160 (412)
T TIGR02407 81 REFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLS 160 (412)
T ss_pred HHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCC
Confidence 344455555542221 11247775 8999988765442 1122334566433 34511 111111 011 1 1
Q ss_pred EEEEEeCCCCC--cccCHHHHHhhhhccCCC-CCceEEEE-ecc-cccchh-cHH---HHHH-HHHCCcEEEeccccc-C
Q 021539 194 KVIAAPETWLD--LRIKGSQLSQNFRRKCKY-TPKGLFSY-PVV-VNGTRY-SMH---WISE-AHRNAWHVLLDATGL-V 262 (311)
Q Consensus 194 ~V~~vp~~~~~--g~id~~~L~~~l~~~~~~-~~t~LVs~-~~~-~tG~i~-Pi~---~I~~-a~~~g~~vlvDAaQs-v 262 (311)
.+..+|..... ..-+.+.+++.+.+.... .....|.+ +.+ ..|.+. |-+ +|.+ |+++|+++++|-+|. +
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 240 (412)
T TIGR02407 161 NVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC 240 (412)
T ss_pred CeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 23445542100 001355677777632110 11344444 333 467743 433 4544 689999999999997 3
Q ss_pred ccCc----ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 263 FGED----QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 263 ~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
|.. ..+.....||+++++ | .+| +.| +|+++++++.
T Consensus 241 -GRtG~~~a~~~~~v~PDi~~~~--K-~lg-~~G~pigav~~~~~~ 281 (412)
T TIGR02407 241 -GRTGTFFSFEPAGIEPDIVCLS--K-SIS-GYGLPLALTLIKPEL 281 (412)
T ss_pred -CccchhHHhcccCCCCCEEEec--h-hcc-CCccceeEEEEchhh
Confidence 431 223344679999988 9 455 334 8999998775
No 304
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0026 Score=62.69 Aligned_cols=172 Identities=14% Similarity=0.066 Sum_probs=104.1
Q ss_pred hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEEE---EccCcC-hHHHHHHHHhCCcE
Q 021539 121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYYL---TIISEE-SDYIKGFAAQKESK 194 (311)
Q Consensus 121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~Il---s~~eh~-~~~~~~la~~~G~~ 194 (311)
|...-..+ .-++++.++.|+++|+.--|-.-+ +++-|+-.|-.++ +.++++|+ .+.+-| +..... ..+.+.
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal-l~Ph~RiMGLDLP~GGHLsHGy~T--~~kkIS 156 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL-LKPHERIMGLDLPSGGHLSHGYQT--PTKKIS 156 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh-cCCCCeeeeccCCCCCcccccccc--CCceee
Confidence 44433333 368999999999998754443332 4455554454454 56788886 233323 211100 011111
Q ss_pred ---E--EEEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccC----
Q 021539 195 ---V--IAAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLV---- 262 (311)
Q Consensus 195 ---V--~~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv---- 262 (311)
+ +..| ++...|.||.|.|++....- + .+|+.+....--...+..++.+ |-+.|+++++|.+|--
T Consensus 157 a~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f---r-Pk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA 232 (477)
T KOG2467|consen 157 ATSIYFESMPYKVDPSTGYIDYDKLEKTATLF---R-PKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVA 232 (477)
T ss_pred eeeeecccCceeeCCCCCceehHHHHHHHHhc---C-CcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHh
Confidence 1 1123 55557899999998543321 1 2344433334667888999977 4789999999999964
Q ss_pred ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
.|.+|-.++ -+|.++-+-||++-| |.| |..+.|+...
T Consensus 233 A~vipsPFe--y~DiVTTTTHKsLRG-PRg-~mIFyRkGvk 269 (477)
T KOG2467|consen 233 AGVIPSPFE--YCDIVTTTTHKSLRG-PRG-AMIFYRKGVK 269 (477)
T ss_pred cccCCCccc--ccceeeccccccccC-Ccc-eeEEEeccCC
Confidence 044444443 489999999998888 975 5566666543
No 305
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=97.15 E-value=0.014 Score=58.08 Aligned_cols=167 Identities=10% Similarity=0.011 Sum_probs=87.7
Q ss_pred HHHHHHHHHcCCCC-CCCeEEEe-CCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChH--HHHHHH----HhC--Cc--
Q 021539 130 QARNRALKHCGLSE-DEYLVLFV-PNYKEAMLMIGE---SYPFFKGNYYLTII-SEESD--YIKGFA----AQK--ES-- 193 (311)
Q Consensus 130 ~aR~~IA~~Lga~~-dey~VvFT-snaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~--~~~~la----~~~--G~-- 193 (311)
+.-+++++.+..+. .++.+.|+ .++|||+..++. .+ ....+|++.. .+|.. ....+. .+. +.
T Consensus 86 ~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~ 163 (425)
T PRK09264 86 EFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV--TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPL 163 (425)
T ss_pred HHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh--cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCC
Confidence 44445555543321 12247775 799998876544 33 2234565433 34411 111110 011 11
Q ss_pred -EEEEEeCCCCC-c-ccCHHHHHhhhhccCCC-CCceEEEE-ecc-cccchh----cHHHHHH-HHHCCcEEEecccccC
Q 021539 194 -KVIAAPETWLD-L-RIKGSQLSQNFRRKCKY-TPKGLFSY-PVV-VNGTRY----SMHWISE-AHRNAWHVLLDATGLV 262 (311)
Q Consensus 194 -~V~~vp~~~~~-g-~id~~~L~~~l~~~~~~-~~t~LVs~-~~~-~tG~i~----Pi~~I~~-a~~~g~~vlvDAaQsv 262 (311)
.+..+|..... . .-+.+++++.+...... .....|.+ +.+ ..|.+. .+++|.+ |+++|+++++|-+|.-
T Consensus 164 ~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 243 (425)
T PRK09264 164 NNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG 243 (425)
T ss_pred CCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC
Confidence 34455543100 0 01456778888642100 12344444 333 467655 3667755 6999999999999962
Q ss_pred ccC---c-ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539 263 FGE---D-QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS 302 (311)
Q Consensus 263 ~G~---~-pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~ 302 (311)
.|. . ..+.....+|+++++ | -+| +.| +|+++++++.
T Consensus 244 ~GrtG~~~~~~~~~v~PDi~t~~--K-~l~-~~G~pigav~~~~~i 285 (425)
T PRK09264 244 CGRTGTFFSFERAGITPDIVTLS--K-SIS-GYGLPMALVLIKPEL 285 (425)
T ss_pred CccccHHHHHhhcCCCCCEEEec--c-ccC-CCccceEEEEEchhh
Confidence 132 1 223233579999997 9 555 435 5999998765
No 306
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=97.09 E-value=0.021 Score=57.30 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=51.7
Q ss_pred ceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc--cCCC--CCCCcEEEEccccCcCCCCCc
Q 021539 225 KGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ--LALA--LHRPDLVLCTLDNNTHAQPLK 292 (311)
Q Consensus 225 t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~G 292 (311)
...|.+- .+ ..|.+.| +++|.+ |+++|+++++|=+|. + |..- +-.. ...+|+++++ |++.|+ ..
T Consensus 222 iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~-gr~G~~~a~~~~gv~pDivt~~--K~l~~G-~p 297 (441)
T PRK05769 222 VAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGM-GRTGKMFAIEHFGVEPDIITLA--KAIAGG-LP 297 (441)
T ss_pred eEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcccceehhhccCCCCCEEEEc--ccccCC-cc
Confidence 4455543 33 4789999 888865 699999999999998 4 5433 1111 2458999887 745542 33
Q ss_pred eEEEEEeCCCCc
Q 021539 293 ITCLLVRRKSFD 304 (311)
Q Consensus 293 iG~L~vr~~~~~ 304 (311)
+|+++.+++..+
T Consensus 298 ~gav~~~~~i~~ 309 (441)
T PRK05769 298 LGAVIGRAELMF 309 (441)
T ss_pred cEEEEEehhhhh
Confidence 888998877653
No 307
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.00 E-value=0.02 Score=57.35 Aligned_cols=161 Identities=13% Similarity=0.043 Sum_probs=92.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCC--CCEEE-EccCcC--hHHHHHHHHhCCcEEEEEeCCCC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK--GNYYL-TIISEE--SDYIKGFAAQKESKVIAAPETWL 203 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~--Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~vp~~~~ 203 (311)
-+=+.-|+++.|.+-.. --.-.++|.+-..+.-++...+ .+.++ +..-|+ .+.++..++-.|++|+..+.+
T Consensus 123 fefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-- 198 (450)
T COG0403 123 FEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-- 198 (450)
T ss_pred HHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc--
Confidence 46677899999985322 2223355554333333332333 35554 444566 456777677678888777664
Q ss_pred CcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539 204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC 280 (311)
Q Consensus 204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~ 280 (311)
+.++|++. ... .+.-+.+..- ..| ...++..|.+ +|++|++|+|=+=-...+... .-.++++|.++.
T Consensus 199 ----d~~~l~~~-~~~----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~-pPGe~GADIvvG 268 (450)
T COG0403 199 ----DLDDLESA-DDG----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLK-PPGEFGADIVVG 268 (450)
T ss_pred ----hhhhhhhc-ccc----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccC-CccccCCceEEe
Confidence 45566665 321 1222222222 588 6677999855 799999876532111101111 123478999999
Q ss_pred ccccC----cCCCCCceEEEEEeCCCCc
Q 021539 281 TLDNN----THAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 281 S~HK~----l~G~P~GiG~L~vr~~~~~ 304 (311)
+++-. -||+| ..|++-+|++...
T Consensus 269 ~~QrfGvPmgfGGP-hag~fA~~~~~~R 295 (450)
T COG0403 269 SAQRFGVPMGFGGP-HAGYFAVKDEFKR 295 (450)
T ss_pred cCcccCCCcCCCCc-ceeeeeEhHhHhh
Confidence 99982 24445 5788988877643
No 308
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0096 Score=59.31 Aligned_cols=164 Identities=13% Similarity=0.066 Sum_probs=96.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCC-CCEEEEcc-CcChH-------HHHHHHHhC
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFK-GNYYLTII-SEESD-------YIKGFAAQK 191 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~-Gd~Ils~~-eh~~~-------~~~~la~~~ 191 (311)
.....++.-+.+.++.+ ..+ .|.|+.++|||+..++. -+...+ ..+|++.. ..|.. .+.. ..++
T Consensus 82 ~~~~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~-ky~~ 157 (404)
T COG4992 82 YNEPQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQP-KYRK 157 (404)
T ss_pred CChHHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCCh-hhcc
Confidence 34444455566666665 223 49999999999876544 222111 23555332 33311 0111 0112
Q ss_pred Cc-----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcHH----HHHH-HHHCCcEEEeccc
Q 021539 192 ES-----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSMH----WISE-AHRNAWHVLLDAT 259 (311)
Q Consensus 192 G~-----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi~----~I~~-a~~~g~~vlvDAa 259 (311)
++ .+..+|.+ |.+.++++++++ |.-|.+ +.+ +-|++.|-. .+.+ |.++|+++++|=+
T Consensus 158 ~F~Pl~~g~~~vpfn------Di~al~~ai~~~-----taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV 226 (404)
T COG4992 158 GFGPLLPGFRHVPFN------DIEALEAAIDED-----TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV 226 (404)
T ss_pred CCCCCCCCceecCCC------CHHHHHHHhccC-----eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc
Confidence 33 24556664 568999999875 455554 555 789887744 3444 6789999999999
Q ss_pred ccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 260 GLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 260 Qsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
|.-.|..- .......||.++.. |++.|+ -=+|+++.++...+.
T Consensus 227 QtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG-~PigA~la~~~~~~~ 273 (404)
T COG4992 227 QTGLGRTGKLFAYEHYGVEPDILTLA--KALGGG-FPIGAMLATEEIASA 273 (404)
T ss_pred ccCCCccchHHHHHHhCCCCCEEEee--ccccCC-ccceeeEEchhhhhc
Confidence 98433221 11223469998764 867654 338999998654443
No 309
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=96.96 E-value=0.0041 Score=61.93 Aligned_cols=184 Identities=14% Similarity=0.153 Sum_probs=111.2
Q ss_pred hhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC
Q 021539 107 SRLLDILSKKTSFKGNFISIPEIQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS 178 (311)
Q Consensus 107 ~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e 178 (311)
+...+.+.....|+|-. .-|+.+|+|+. .+|+ +||.|.|+|.|++++.--+. .+|+.++.+.-
T Consensus 108 ~~~f~~la~fqdy~Gl~------~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtP 178 (471)
T KOG0256|consen 108 QSSFDELAMFQDYHGLP------SFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCLA-DPGDAFLVPTP 178 (471)
T ss_pred ccchhhHhhcccccCch------HHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHhc-CCCceeeecCC
Confidence 33455555556666654 45777777764 2444 49999999999999876653 47887653221
Q ss_pred cChHHHHHHHHhCCcEEEEEeCCCCC-cccCHHHHHhhhhccCCC-CC-ceEEEE-ecccccchhcHHHHHH----HHHC
Q 021539 179 EESDYIKGFAAQKESKVIAAPETWLD-LRIKGSQLSQNFRRKCKY-TP-KGLFSY-PVVVNGTRYSMHWISE----AHRN 250 (311)
Q Consensus 179 h~~~~~~~la~~~G~~V~~vp~~~~~-g~id~~~L~~~l~~~~~~-~~-t~LVs~-~~~~tG~i~Pi~~I~~----a~~~ 250 (311)
...-..+.+.-+.|++++.+.....+ -+|+.+.|++++.+..+. .+ .+|+.. +++-.|+.++=+++.. +.++
T Consensus 179 yY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 179 YYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK 258 (471)
T ss_pred CCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc
Confidence 11111133323458888888765544 478889998877643211 11 244443 4445899999887632 5789
Q ss_pred CcEEEecccccCc--cCccc-CCCC------CCCc--EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539 251 AWHVLLDATGLVF--GEDQL-ALAL------HRPD--LVLCTLDNNTHAQPLK--ITCLLVRRK 301 (311)
Q Consensus 251 g~~vlvDAaQsv~--G~~pl-dl~~------l~~D--fl~~S~HK~l~G~P~G--iG~L~vr~~ 301 (311)
++++++|=.=+.+ +...+ .+.+ +++| -++-|.-| =||.| | +|++|-.++
T Consensus 259 niHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK-D~Glp-GfRvGviYS~ne 320 (471)
T KOG0256|consen 259 NIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK-DFGLP-GFRVGVIYSNNE 320 (471)
T ss_pred ceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc-ccCCC-ceEEEEEEecCh
Confidence 9999999754421 22211 1110 1222 35677788 78866 5 799987654
No 310
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=96.95 E-value=0.014 Score=57.47 Aligned_cols=162 Identities=13% Similarity=0.085 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CC---C-CCCCEEEEc-cCcChHH--HHHHHHhC---
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YP---F-FKGNYYLTI-ISEESDY--IKGFAAQK--- 191 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~---~-~~Gd~Ils~-~eh~~~~--~~~la~~~--- 191 (311)
.....+.-++++++++. + .|.|+.+++||+..++.. +. . ..++.|++. ..+|... ...+....
T Consensus 80 ~~~~~~la~~l~~~~~~--~--~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~ 155 (406)
T PRK12381 80 NEPVLRLAKKLIDATFA--D--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYS 155 (406)
T ss_pred CHHHHHHHHHHHhhCCC--C--eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccc
Confidence 34445777788888754 3 499999999998765543 21 0 123456543 2344211 11111100
Q ss_pred -C-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccc-cchh----cHHHHHH-HHHCCcEEEecc
Q 021539 192 -E-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVN-GTRY----SMHWISE-AHRNAWHVLLDA 258 (311)
Q Consensus 192 -G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~t-G~i~----Pi~~I~~-a~~~g~~vlvDA 258 (311)
+ ..+..+|. -+.+.+++.+.++ ++.|.+ +.+.+ |.+. .+++|.+ |+++|+++++|=
T Consensus 156 ~~~~~~~~~~~~~~~------~d~~~l~~~l~~~-----~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DE 224 (406)
T PRK12381 156 QDFAPLPPDIRHAAY------NDLNSASALIDDQ-----TCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDE 224 (406)
T ss_pred cCCCCCCCCeeEeCC------CCHHHHHHhccCC-----eeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcc
Confidence 0 01222222 1467888888643 455554 34434 4332 3455644 689999999999
Q ss_pred cccCccCcc--c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 259 TGLVFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 259 aQsv~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+|.-.|... + ......+|++++| |++.|+ --+|+++.++++.+
T Consensus 225 v~tG~gr~G~~~~~~~~~v~pDi~t~s--K~l~gG-~~ig~~~~~~~~~~ 271 (406)
T PRK12381 225 VQTGVGRTGELYAYMHYGVTPDVLTTA--KALGGG-FPIGAMLTTEKCAS 271 (406)
T ss_pred hhhCCCCCcchhhhHhhCCCCCEEEeh--hhhhCC-CceEEEEEcHHHHh
Confidence 995213321 1 1223468987665 944321 12888888876543
No 311
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.022 Score=55.16 Aligned_cols=142 Identities=17% Similarity=0.073 Sum_probs=93.0
Q ss_pred HHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHH----------HHhCCcEEEEEeCCCCC
Q 021539 135 ALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF----------AAQKESKVIAAPETWLD 204 (311)
Q Consensus 135 IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~l----------a~~~G~~V~~vp~~~~~ 204 (311)
-|+.+|+...--..=|. |+|+|+..++.++ +++||+.++..+.+-+.+.+. .+..|++...+|... +
T Consensus 74 yA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~-~ 150 (416)
T COG4100 74 YAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTA-D 150 (416)
T ss_pred HHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccccc-C
Confidence 47788885432223344 5689999999887 689999765555442222211 245688888899876 7
Q ss_pred cccCHHHHHhhhhccCCCCCceEEEEecccccc----hhcHHHHHH----HHH--CCcEEEeccccc--CccCcccCCCC
Q 021539 205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGT----RYSMHWISE----AHR--NAWHVLLDATGL--VFGEDQLALAL 272 (311)
Q Consensus 205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~----i~Pi~~I~~----a~~--~g~~vlvDAaQs--v~G~~pldl~~ 272 (311)
|.||.+.++..++++ |+|+.+.- +.|. -++|.+|.+ +++ .++.++||-+=. +--+.|.+
T Consensus 151 gkiD~~~v~~~i~~~-----tkli~IQR-S~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~--- 221 (416)
T COG4100 151 GKIDIQAVKTAISDR-----TKLIGIQR-SKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTH--- 221 (416)
T ss_pred CcccHHHHHHhcCcc-----ceEEEEEe-ccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccc---
Confidence 999999999999876 67887642 3442 234555544 333 589999997632 10123444
Q ss_pred CCCcEEEEccccCcCC
Q 021539 273 HRPDLVLCTLDNNTHA 288 (311)
Q Consensus 273 l~~Dfl~~S~HK~l~G 288 (311)
.++|.++.|.=|.-.|
T Consensus 222 vGaDliAGSLIKNpGG 237 (416)
T COG4100 222 VGADLIAGSLIKNPGG 237 (416)
T ss_pred cchhhhccceeeCCCC
Confidence 4799999999994433
No 312
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=96.77 E-value=0.03 Score=56.48 Aligned_cols=167 Identities=10% Similarity=0.029 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCC-CEEEEcc-CcChH--HHHHHHH----hCC-
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKG-NYYLTII-SEESD--YIKGFAA----QKE- 192 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~G-d~Ils~~-eh~~~--~~~~la~----~~G- 192 (311)
.....+.-+++++++... ...+.|+.++|||+..++. .+.-..| ..|++.. .+|.. ....+.. +.+
T Consensus 116 ~~~~~~lAe~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGK--LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred CHHHHHHHHHHHHhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 333445556666665432 2359999999998876544 3311123 3455433 34511 1111100 011
Q ss_pred ----cEEEEEeCCCCCcccCHHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539 193 ----SKVIAAPETWLDLRIKGSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG 260 (311)
Q Consensus 193 ----~~V~~vp~~~~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ 260 (311)
..+..+|.+ |.+.+++.++... .......|.+ +.+ +-|.+.| ++++.+ |+++|+++++|=+|
T Consensus 194 ~p~~~~~~~~p~~------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~ 267 (442)
T TIGR03372 194 MPLLPGFHHVAFG------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ 267 (442)
T ss_pred CCCCCCCEEeCCC------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc
Confidence 123344443 3455656554210 0112344444 333 4788888 888865 69999999999999
Q ss_pred c-CccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 261 L-VFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 261 s-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
. + |..-- ......||++++ =|.+-|+ | +|+++.+++..+
T Consensus 268 tG~-GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~P--igavv~~~~i~~ 313 (442)
T TIGR03372 268 TGM-GRTGKMFACEHEGVQPDILCL--AKALGGGVMP--IGATIATEAVFS 313 (442)
T ss_pred cCC-CccccchhhhhcCCCCCeeee--hhhhcCCccc--ceEEEecHHHHH
Confidence 5 3 43221 112246999885 5855542 4 788888877644
No 313
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=96.75 E-value=0.012 Score=58.19 Aligned_cols=162 Identities=15% Similarity=0.076 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHHHhCCc--------
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFAAQKES-------- 193 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~-------- 193 (311)
....+.+++|++++... + .|+||.++|||+..++.. ..+...++|++.. .+|. ..+..+. ..+.
T Consensus 88 ~~~~~lae~l~~~~~~~-~--~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~-~~~~~~~~~~~~ 163 (423)
T TIGR00713 88 EAEILLAKEIISRVPSV-E--MVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKA-GSGAATLGLPTS 163 (423)
T ss_pred HHHHHHHHHHHHhCCcc-c--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccc-cCcccccCCCCC
Confidence 34568899999988653 3 599999999998765542 1122345665432 2341 1111100 0010
Q ss_pred ---------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539 194 ---------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLD 257 (311)
Q Consensus 194 ---------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvD 257 (311)
.+..+|. -+.++|++.+++.. ..++.|.+ +.. .+|.+.| +++|.+ |+++|+++++|
T Consensus 164 ~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D 235 (423)
T TIGR00713 164 PGVPEDFAKLTLVLPY------NDLEALEEVFEEYG--EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFD 235 (423)
T ss_pred CCCCcccccceEEeCC------CCHHHHHHHHHHcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 0111121 15788888886321 12445544 333 4798888 456655 68999999999
Q ss_pred ccccCccC--c-ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 258 ATGLVFGE--D-QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 258 AaQsv~G~--~-pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
=+|.-... . ........+|.+ ++=| .+| + | +|+++.++++.+
T Consensus 236 Ev~~g~r~g~~~~~~~~~~~pDi~--t~sK-~l~-~-G~pig~v~~~~~i~~ 282 (423)
T TIGR00713 236 EVMTGFRVALGGAQEYFGVEPDLT--TLGK-IIG-G-GLPVGAFGGRREIME 282 (423)
T ss_pred ccccccccCcchhHHHhCCCcchh--hhhh-hhc-C-CCceeeeeEHHHHHH
Confidence 99962111 0 011123468865 4679 565 2 4 799998875543
No 314
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=96.74 E-value=0.023 Score=57.54 Aligned_cols=168 Identities=10% Similarity=0.022 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCC-CEEEEc-cCcCh--HHHHHHHHhCCc----
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKG-NYYLTI-ISEES--DYIKGFAAQKES---- 193 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~G-d~Ils~-~eh~~--~~~~~la~~~G~---- 193 (311)
.....+.-+++++++... ...|.|+.++|||+..++. .+.-.+| ..|++. ..+|. .....+......
T Consensus 123 ~~~~~~lae~L~~~~p~~--~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGK--LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred CHHHHHHHHHHHHhCCCC--CCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 334445556666665432 2359999999999876544 3321223 345533 34451 111111100001
Q ss_pred -----EEEEEeCCCCCcccCHHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539 194 -----KVIAAPETWLDLRIKGSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG 260 (311)
Q Consensus 194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ 260 (311)
.+..+|.+ +.+.+++.++... .......|.+ +.+ ..|.+.| ++.+.+ |+++|+++++|=+|
T Consensus 201 ~~~~~~~~~~~~~------d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 274 (459)
T PRK11522 201 MPLLPGFRHVPFG------NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ 274 (459)
T ss_pred CCCCCCCcccCCC------CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce
Confidence 12222221 4566777775310 0012334444 333 4788888 888865 69999999999999
Q ss_pred cCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 261 LVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 261 sv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
.-.|..- .......||++++ =|++-|+ | +|+++.+++..+
T Consensus 275 tG~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~P--igav~~~~~i~~ 320 (459)
T PRK11522 275 TGMGRTGKMFACEHENVQPDILCL--AKALGGGVMP--IGATIATEEVFS 320 (459)
T ss_pred ecCCccchhhhhhccCCCCCEEEe--chhhhCCCcc--ceeEEEcHHHHH
Confidence 5113221 1122246998866 5845442 4 799999876543
No 315
>PRK06062 hypothetical protein; Provisional
Probab=96.71 E-value=0.042 Score=55.39 Aligned_cols=173 Identities=12% Similarity=0.036 Sum_probs=91.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcC--hHHHHHHHH---hCC-----
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEE--SDYIKGFAA---QKE----- 192 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~--~~~~~~la~---~~G----- 192 (311)
.....+.-+++++++...- ..|.|+.++|||+..++.- ..+.....|++.. .+| ......+.. .+.
T Consensus 94 ~~~~~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 171 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL--SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGR 171 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC--CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCC
Confidence 3334455555666654222 2599999999998765442 1122234565433 344 111111110 000
Q ss_pred cEEEEEeCCCCC-ccc----C-------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcE
Q 021539 193 SKVIAAPETWLD-LRI----K-------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWH 253 (311)
Q Consensus 193 ~~V~~vp~~~~~-g~i----d-------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~ 253 (311)
..+..++..... ... + .++|+++|+.. .......|.+ +.+ .-|.+.| ++++.+ |+++|++
T Consensus 172 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 250 (451)
T PRK06062 172 AGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE-GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV 250 (451)
T ss_pred CCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 012222211100 000 1 45677777532 1112344444 333 4788888 888865 7999999
Q ss_pred EEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 254 VLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 254 vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++|=+|.-.|..- .+.-...||++++ =|++-|+ | +|+++.++++.+
T Consensus 251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~--gK~lggG~~P--igav~~~~~i~~ 303 (451)
T PRK06062 251 LIADEVMAGFGRTGKWFAIEHFGVVPDLITF--AKGVNSGYVP--LGGVAISEAIAA 303 (451)
T ss_pred EEeeccccCCCcCcHHHHHHhcCCCCCeeee--chhhhcCCcC--cEEEEEcHHHHH
Confidence 99999998325332 1222357998876 4845442 4 788888877654
No 316
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.61 E-value=0.019 Score=55.12 Aligned_cols=166 Identities=15% Similarity=0.205 Sum_probs=104.6
Q ss_pred CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHH-----HHHHHhcCCCCCC---CEEEEc-cCcChHHHHHH
Q 021539 118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEA-----MLMIGESYPFFKG---NYYLTI-ISEESDYIKGF 187 (311)
Q Consensus 118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTea-----lnlv~~s~~~~~G---d~Ils~-~eh~~~~~~~l 187 (311)
|+++......++++...+-+++|++ |.|.|+|.. |+|+- +|+++ ++.| |+|+|. .. ..+..+
T Consensus 44 SHRsk~f~kii~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv~lNL~g----lK~g~~AdYiVTGsWS--~KA~~E- 115 (370)
T KOG2790|consen 44 SHRSKDFAKIINDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAVPLNLIG----LKHGRCADYVVTGSWS--AKAAEE- 115 (370)
T ss_pred cccchhHHHHHHHHHHHHHHHHcCC-CceeEEEEeCCCcccccccchhhhc----cccCCccceEEecccc--HHHHHH-
Confidence 5567777788899999999999996 788999996 55654 45544 2334 456542 22 111222
Q ss_pred HHhCCcEEEEEe-CCC-CCccc-CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccC
Q 021539 188 AAQKESKVIAAP-ETW-LDLRI-KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLV 262 (311)
Q Consensus 188 a~~~G~~V~~vp-~~~-~~g~i-d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv 262 (311)
|++.|.--..+| ... ..|.| +.+.++ ++++ ...|=+.++ +-|+-.| ++-.---+|+.+++|-+.-+
T Consensus 116 Akk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~d-----a~yvyyCaNETVHGVEf~--~~P~~~~~~~vlVaDmSSnf 186 (370)
T KOG2790|consen 116 AKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPD-----ASYVYYCANETVHGVEFD--FIPVNDPKGAVLVADMSSNF 186 (370)
T ss_pred HHhhCCceEEeccccccccCcCCChhhcc--cCCC-----ccEEEEecCceeeceecC--CCCCCCCCCceEEEecccch
Confidence 444554323333 221 11233 222222 1222 246655666 3576433 12111246888999999999
Q ss_pred ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
-..|+|++.+ +.+....+| -.| |.|+.+.+||++++..
T Consensus 187 -lSrpvDvsk~--gvi~aGAQK-N~G-~aG~Tvvivr~dllg~ 224 (370)
T KOG2790|consen 187 -LSRPVDVSKF--GVIFAGAQK-NVG-PAGVTVVIVRKDLLGN 224 (370)
T ss_pred -hcCCccchhc--ceEEecccc-ccC-ccccEEEEEehhhhcc
Confidence 8899999865 678888999 888 9999999999998765
No 317
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.61 E-value=0.0011 Score=65.54 Aligned_cols=161 Identities=11% Similarity=0.019 Sum_probs=95.5
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHH-HHHHHHhcCCC-CCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC--CCCCc
Q 021539 131 ARNRALKHCGLSEDEYLVLFVPNYKE-AMLMIGESYPF-FKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE--TWLDL 205 (311)
Q Consensus 131 aR~~IA~~Lga~~dey~VvFTsnaTe-alnlv~~s~~~-~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~--~~~~g 205 (311)
.=..+.+.+|+.. -...+.+|-||. ++.+...++.- ..++.|+ +.++|.+. ... ...-|.+++.||. ..+..
T Consensus 61 l~~d~~~~~G~~~-~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc-~ka-i~~AGl~~~vV~~~~~~d~l 137 (389)
T PF05889_consen 61 LVLDALRLAGLRS-VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC-FKA-IERAGLEPVVVENVLEGDEL 137 (389)
T ss_dssp HHHHHHHHTTHTT-HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH-HHH-HHHTT-EEEEE-EEEETTEE
T ss_pred HHHHHHHHcCCcc-ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccch-HHH-HHhcCCeEEEeeccCCCCee
Confidence 3345566788863 234677898887 34444444421 2456765 67777643 222 2334888888873 22233
Q ss_pred ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc-HHHHHH-HHHCCcEEEecccccC--------------ccCcc
Q 021539 206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS-MHWISE-AHRNAWHVLLDATGLV--------------FGEDQ 267 (311)
Q Consensus 206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv--------------~G~~p 267 (311)
..+.+.+++.+++. + ....|..+++. +-|..-| +++|++ |+++|++.++-.|=++ .|.+|
T Consensus 138 ~td~~~ie~~i~~~-G-~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvd 215 (389)
T PF05889_consen 138 ITDLEAIEAKIEEL-G-ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVD 215 (389)
T ss_dssp EEHHHHHHHHHHHH-C-GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCS
T ss_pred eccHHHHHHHHHHh-C-CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcc
Confidence 45677788888653 1 11345555655 5898888 999987 6999999999887443 27888
Q ss_pred cCCCCCCCcEEEEccccCcCCCCCceEEEE
Q 021539 268 LALALHRPDLVLCTLDNNTHAQPLKITCLL 297 (311)
Q Consensus 268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~ 297 (311)
++++.++.||++-+|||.+.+ +.-.|++-
T Consensus 216 a~vqS~dkNF~VPvGgai~As-~~~~~i~~ 244 (389)
T PF05889_consen 216 AFVQSTDKNFMVPVGGAIMAS-FDPSGILA 244 (389)
T ss_dssp EEEEEHHHHHCEESSHEEEEE-SSHHHHHH
T ss_pred eeeeecCCCEEecCCCcEEEe-cCHHHHHH
Confidence 888999999999999994444 53344433
No 318
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=96.55 E-value=0.007 Score=58.56 Aligned_cols=180 Identities=12% Similarity=0.024 Sum_probs=95.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC------CC-CCCEEEEcc-CcC--hHHHHH----
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP------FF-KGNYYLTII-SEE--SDYIKG---- 186 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~------~~-~Gd~Ils~~-eh~--~~~~~~---- 186 (311)
.........+.-+++.+.++- ....|.|+.++|||+..++.-.. .. ..+.|++.. .+| ......
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~ 131 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGN 131 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSS
T ss_pred cceeccchhhhhhhhhhcccc--ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCC
Confidence 344444555666777777733 23369999999999876554221 11 224566443 344 111111
Q ss_pred --HHHhC---CcEEEEEeCCCCCc----ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHC
Q 021539 187 --FAAQK---ESKVIAAPETWLDL----RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRN 250 (311)
Q Consensus 187 --la~~~---G~~V~~vp~~~~~g----~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~ 250 (311)
..+.. ...+..+|...... .-..+.+++.+..... .....|.+ +.+ +.|.+.| ++++.+ |+++
T Consensus 132 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~ 210 (339)
T PF00202_consen 132 PPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA-DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH 210 (339)
T ss_dssp THHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG-GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT
T ss_pred ccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC-CcEEEEEEeccccccCccccccchhhehccccccc
Confidence 11111 12456677653111 0011122222221100 11333333 333 3566654 345544 6899
Q ss_pred CcEEEecccccCccCcccCC----CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539 251 AWHVLLDATGLVFGEDQLAL----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT 306 (311)
Q Consensus 251 g~~vlvDAaQsv~G~~pldl----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~ 306 (311)
|+++++|=+|.-.|..---+ ..+.||+++++ |++-|+ --+|++++++++.+..
T Consensus 211 gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~sav~~~~~i~~~~ 267 (339)
T PF00202_consen 211 GILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPISAVLGSEEIMEAF 267 (339)
T ss_dssp T-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSEEEEEEEHHHHTTS
T ss_pred ccceecccccccccccCCccceecccccCcccccc--cchhhh-hhcccccccchhhccc
Confidence 99999999998424433222 23679999998 966665 4489999998776543
No 319
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=96.51 E-value=0.06 Score=55.25 Aligned_cols=90 Identities=19% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCccc----CCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQL----ALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pl----dl~~l~~Df 277 (311)
++|++++.... ......|.+ +.+ ..|.+.| ++++.+ |+++|+++++|=+| .+ |..-- +.....||+
T Consensus 247 ~~le~~l~~~~-~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf-GRtG~~~a~e~~gv~PDi 324 (504)
T PLN02760 247 DNLENLILKEG-PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF-GRLGTMFGCDKYNIKPDL 324 (504)
T ss_pred HHHHHHHHhcC-CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC-cccchhhHHHhcCCCCcE
Confidence 45666664211 112344444 333 4788988 889866 69999999999999 45 54321 112245998
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCCcc
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSFDT 305 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~~ 305 (311)
++++ |++-|+ | +|++++++++.+.
T Consensus 325 vtlg--K~lggG~~P--igAv~~~~~i~d~ 350 (504)
T PLN02760 325 VSLA--KALSSAYMP--IGAVLVSPEISDV 350 (504)
T ss_pred EEec--ccccCCccc--cceEeecHHHHhh
Confidence 7774 855442 4 7888888776553
No 320
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=96.50 E-value=0.063 Score=53.48 Aligned_cols=174 Identities=14% Similarity=0.088 Sum_probs=92.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEcc-CcChH--HHHHHH-----HhCC--
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTII-SEESD--YIKGFA-----AQKE-- 192 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~-eh~~~--~~~~la-----~~~G-- 192 (311)
......+.-+++++++.- ....|.|+.+++||+..++.-- .+.....|++.. .+|.. ....+. .+.+
T Consensus 84 ~~~~~~~la~~L~~~~~~--~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 84 YYESILKLAEELAEITPG--GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred CCHHHHHHHHHHHHhCCC--CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 344445677778887732 2235999999999987655421 112224565432 34411 110110 0001
Q ss_pred ---cEEEEEeCCCCC----c-------ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCC
Q 021539 193 ---SKVIAAPETWLD----L-------RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNA 251 (311)
Q Consensus 193 ---~~V~~vp~~~~~----g-------~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g 251 (311)
..+..+|..... + .-+.++++++++..........|.+ +.+ ..|.+.| ++++.+ |+++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 113344432100 0 0134556676653111112444444 333 4789988 888865 69999
Q ss_pred cEEEecccccCccCcccC--CC--CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 252 WHVLLDATGLVFGEDQLA--LA--LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 252 ~~vlvDAaQsv~G~~pld--l~--~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+++++|=+|.-.|..--- .. ...+|++ ++=| -+| + | +|+++.+++..+
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK-~lg-~-G~pigav~~~~~i~~ 295 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAK-GIA-S-GLPLSAVVASKELME 295 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEe--ehhh-hcc-C-CCcceeEEEcHHHHh
Confidence 999999998832332111 11 2357875 5569 555 2 4 788888876543
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.49 E-value=0.021 Score=56.94 Aligned_cols=167 Identities=11% Similarity=0.019 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHHH------h----C
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFAA------Q----K 191 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la~------~----~ 191 (311)
....+.++++++.+. ..+ .|.||.+++||+..++.. ..+..++.|++.. .+|.. ....+.. . .
T Consensus 90 ~~~~~la~~L~~~~~-~~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 90 ELEVELAELVIELVP-SIE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred HHHHHHHHHHHHhCC-CCC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 334567777777653 123 499999999998876663 1122345665433 34421 1111100 0 0
Q ss_pred CcEE----EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539 192 ESKV----IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATG 260 (311)
Q Consensus 192 G~~V----~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ 260 (311)
+... ....+.. -+.+++++.+.+.. ..+..|.+- .. ..|.+.| +++|.+ |+++|+++++|=+|
T Consensus 167 ~~~~~~~~~~~~~~~----~d~~~l~~~i~~~~--~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 240 (426)
T PRK00062 167 GVPEDFAKHTLTAPY----NDLEAVEELFEEYG--DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240 (426)
T ss_pred CCCcccccceEEcCC----CCHHHHHHHHHhCC--CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 1100 0111111 15678888886421 124555554 33 5899988 778855 68999999999999
Q ss_pred cCccCcc---cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 261 LVFGEDQ---LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 261 sv~G~~p---ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
.-..... .+.-...+|++++ -|.+.++ --+|+++.++++.+
T Consensus 241 ~G~r~g~~~~~~~~~~~pDi~~~--gK~l~~G-~p~ga~~~~~~i~~ 284 (426)
T PRK00062 241 TGFRVALGGAQGYYGVTPDLTTL--GKIIGGG-LPVGAFGGRREIME 284 (426)
T ss_pred hccccCCccHHHHhCCCcchHhh--hhHhhCC-CcceeeeEHHHHHH
Confidence 7311111 1111235887655 5944332 11788887765443
No 322
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=96.30 E-value=0.13 Score=51.74 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcCh---HHHHHHHH-----hC--C--c
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEES---DYIKGFAA-----QK--E--S 193 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~---~~~~~la~-----~~--G--~ 193 (311)
+.=+++++.+...- ..|.|+.++|||+..++. .+ .....|++.. .+|. ..+ .+.. +. + .
T Consensus 88 ~la~~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~ 162 (443)
T PRK08360 88 LLAEKLIEIAPGDN--PKVSFGLSGSDANDGAIKFARAY--TKRRKILSYLRSYYGSTYGAM-SLTGLDFPVRALVGELS 162 (443)
T ss_pred HHHHHHHHhCCCCC--CEEEEcCCHHHHHHHHHHHHHHh--cCCCeEEEEeCCcCCcCHHHH-HhcCCCcccccCCCCCC
Confidence 44444666665422 259999999998876544 33 2234565433 3441 111 1100 00 1 1
Q ss_pred EEEEEeCCCCC----cc-------cCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEE
Q 021539 194 KVIAAPETWLD----LR-------IKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVL 255 (311)
Q Consensus 194 ~V~~vp~~~~~----g~-------id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vl 255 (311)
.+..+|..... +. -+.+.+++.+........++.|.+ +.+ .+|.+.| +++|.+ |+++|++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 242 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLV 242 (443)
T ss_pred CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 23444432100 00 112345555643111112444444 543 5898887 556654 689999999
Q ss_pred ecccccCccCccc----CCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539 256 LDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD 304 (311)
Q Consensus 256 vDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~ 304 (311)
+|=+|.-.|...- ......+|++++ =| -+| + | +|+++.++++.+
T Consensus 243 ~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK-~l~-~-G~pigav~~~~~i~~ 292 (443)
T PRK08360 243 VDEVQSGLGRTGKWFAIEHFGVEPDIITL--GK-PLG-G-GLPISATIGRAEIMD 292 (443)
T ss_pred EeccccCCCcCccchhhhhcCCCCCEEEe--cc-ccc-C-CceeEEEEEcHHHHh
Confidence 9999873243221 112356898876 69 555 2 4 899988866543
No 323
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=96.18 E-value=0.15 Score=51.07 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=48.8
Q ss_pred ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC-CCc
Q 021539 225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ-PLK 292 (311)
Q Consensus 225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~-P~G 292 (311)
...|.+ +.+ ..|.+.| +++|.+ |+++|+++++|=+|.-.|..- ...-...||.++++ |++-|+ |
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~P-- 295 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAGGLP-- 295 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccCCCc--
Confidence 344433 333 4576765 667755 689999999999987214322 11122468999997 955432 3
Q ss_pred eEEEEEeCCCCc
Q 021539 293 ITCLLVRRKSFD 304 (311)
Q Consensus 293 iG~L~vr~~~~~ 304 (311)
+|+++.++++.+
T Consensus 296 i~av~~~~~i~~ 307 (443)
T PRK06058 296 LSAVTGRAEIMD 307 (443)
T ss_pred cEEEEEcHHHHh
Confidence 889999877654
No 324
>PRK06105 aminotransferase; Provisional
Probab=96.07 E-value=0.093 Score=53.08 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=55.8
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Df 277 (311)
+++++.+... +......|.+ +.+ .-|.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.....||+
T Consensus 205 ~~le~~~~~~-~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~-GRtG~~f~~~~~~v~PDi 282 (460)
T PRK06105 205 NELEALILAE-GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGF-GRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCC-CcCchhhhHHhcCCCCCe
Confidence 5567766421 1112334443 333 4688877 777755 689999999999994 5 6431 2223356999
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
++++ |++-|+ | +|+++.++++.+
T Consensus 283 ~~~g--K~lggG~~P--~~av~~~~~i~~ 307 (460)
T PRK06105 283 LVMS--KQLSSSYQP--LSAVLMNEKVYD 307 (460)
T ss_pred eeee--cccccCccc--ceEEEEcHHHHH
Confidence 9875 755553 4 788888876544
No 325
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=96.03 E-value=0.36 Score=48.32 Aligned_cols=176 Identities=11% Similarity=0.004 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHH-----HhCCc--
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFA-----AQKES-- 193 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la-----~~~G~-- 193 (311)
.....+.-+++++++.-.. ...|.|+.++|||+..++.- ..+.....|++.. .+|.. ....+. .+.++
T Consensus 82 ~~~~~~la~~l~~~~p~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK07495 82 YENYVRLAERLNALVPGDF-AKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGA 160 (425)
T ss_pred CHHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCC
Confidence 3333445555666654211 12599999999988765441 1122234565433 34411 111110 11111
Q ss_pred ---EEEEEeCCCCCcccC----HHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEeccc
Q 021539 194 ---KVIAAPETWLDLRIK----GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDAT 259 (311)
Q Consensus 194 ---~V~~vp~~~~~g~id----~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAa 259 (311)
.+..+|.......++ .+.+++.+...........|.+ +.+ ..|.+. | +++|.+ |+++|+++++|=+
T Consensus 161 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 240 (425)
T PRK07495 161 MMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEV 240 (425)
T ss_pred CCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 344555532111112 3445666642111112444444 333 467554 4 445544 6899999999999
Q ss_pred ccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 260 GLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 260 Qsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
|.-.|... .+.....+|++++ =|++.|+ --+|++..+++..+
T Consensus 241 ~tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G-~pigav~~~~~i~~ 286 (425)
T PRK07495 241 QTGFARTGKLFAMEHHEVAADLTTM--AKGLAGG-FPLAAVTGRAEIMD 286 (425)
T ss_pred hhcCCcCCCceeecccCCCCCEEee--hhhhcCC-ccceEEEEcHHHHh
Confidence 87324332 1212246888777 4845432 12888988877654
No 326
>PRK07678 aminotransferase; Validated
Probab=95.91 E-value=0.11 Score=52.39 Aligned_cols=168 Identities=13% Similarity=0.176 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC-C--CCC-CEEEEcc-CcCh--HHHHHHHH----hC-
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP-F--FKG-NYYLTII-SEES--DYIKGFAA----QK- 191 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~-~--~~G-d~Ils~~-eh~~--~~~~~la~----~~- 191 (311)
...+.-++++++++.. ..|.|+.++|||+..++. .+. . ++| ..|++.. .+|. .....+.. +.
T Consensus 90 ~~~~lae~l~~~~~~~---~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 166 (451)
T PRK07678 90 PAIKLAEKLNEWLGGE---YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYK 166 (451)
T ss_pred HHHHHHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccc
Confidence 3445666777777542 259999999998876544 221 0 123 3565433 3441 11111100 00
Q ss_pred -C---cEEEEEeCCCCCccc---------C---HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HH
Q 021539 192 -E---SKVIAAPETWLDLRI---------K---GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AH 248 (311)
Q Consensus 192 -G---~~V~~vp~~~~~g~i---------d---~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~ 248 (311)
+ ..+..+|... ..+. + .+.+++.|..... ....-|.+ +.+ ..|.+.| ++++.+ |+
T Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 167 YEPLAPGFLHVPPPD-CYRMPGIESEDIYDLECVKEIDRVMTWELS-ETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cCCCCCCCEEeCCCc-cccccccCChHHHHHHHHHHHHHHHHhcCC-CceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 0 1223333211 0010 1 2335566652111 12333333 333 4677776 556655 68
Q ss_pred HCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 249 RNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 249 ~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
++|+++++|=+|. + |..- ..--...||++++ =|++-|+ | +|++.+++++.+
T Consensus 245 ~~g~llI~DEV~tGf-GRtG~~~~~~~~gv~PDivt~--gK~lggG~~P--i~av~~~~~i~~ 302 (451)
T PRK07678 245 KHGALLISDEVICGF-GRTGKAFGFMNYGVKPDIITM--AKGITSAYLP--LSATAVKKEIYE 302 (451)
T ss_pred HcCCEEEEeehhhcC-CcCchhHHHHhcCCCCCEEEe--ecccccCCcc--eeEEEEcHHHHH
Confidence 9999999999995 4 5421 1112346999988 4856543 5 899999887654
No 327
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.89 E-value=0.13 Score=51.70 Aligned_cols=171 Identities=13% Similarity=0.060 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCC-CCEEEEcc-CcChH---HH-----HHHH
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFK-GNYYLTII-SEESD---YI-----KGFA 188 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~-Gd~Ils~~-eh~~~---~~-----~~la 188 (311)
.....+.-+++++++... ...|.|+.++|||+..++. .+. -.+ ..+|++.. .+|.. .+ ....
T Consensus 88 ~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 88 HPKAFELANRIAEIAPGG--LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred CHHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 344446666677776322 1259999999998776543 221 011 23565433 34411 11 0000
Q ss_pred HhCC---cEEEEEeCCCC-C-ccc----------CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-
Q 021539 189 AQKE---SKVIAAPETWL-D-LRI----------KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE- 246 (311)
Q Consensus 189 ~~~G---~~V~~vp~~~~-~-g~i----------d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~- 246 (311)
+..+ ..+..+|.... . ..+ ..++|+++++.. .......|.+ +.. ..|.+.| +++|.+
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~l 244 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREI 244 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 0001 12333443210 0 000 135677777532 1112344444 333 4789988 888866
Q ss_pred HHHCCcEEEecccc-cCccCcc----cCCCCCCCcEEEEccccCcCC--CCCceEEEEEeCCCC
Q 021539 247 AHRNAWHVLLDATG-LVFGEDQ----LALALHRPDLVLCTLDNNTHA--QPLKITCLLVRRKSF 303 (311)
Q Consensus 247 a~~~g~~vlvDAaQ-sv~G~~p----ldl~~l~~Dfl~~S~HK~l~G--~P~GiG~L~vr~~~~ 303 (311)
|+++|+++++|=+| .+ |..- .+.....||++++ =|++-| .| +|+++.+++..
T Consensus 245 c~~~g~llI~DEv~tG~-GrtG~~~a~~~~gv~PDivt~--gK~l~gG~~P--~gav~~~~~i~ 303 (442)
T PRK13360 245 CDKHGILLIFDEVITGF-GRLGAPFAAQYFGVTPDLLTC--AKGLTNGAIP--MGAVFVSSEIH 303 (442)
T ss_pred HHHcCCEEEEechhhCC-CCCccchhhhhcCCCCceeee--eeccccCccc--eEEEEEcHHHH
Confidence 69999999999999 45 5421 1222346898876 585543 24 78888886653
No 328
>PRK12403 putative aminotransferase; Provisional
Probab=95.89 E-value=0.073 Score=53.83 Aligned_cols=170 Identities=11% Similarity=0.055 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-----CCCCE-EEEccC-cChHHHHHH--HH---hC--C
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-----FKGNY-YLTIIS-EESDYIKGF--AA---QK--E 192 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-----~~Gd~-Ils~~e-h~~~~~~~l--a~---~~--G 192 (311)
..+.-+++++++....+ .+.|+.++|||+..++.... + ++++. |++... +|...+-.+ .. .+ +
T Consensus 100 ~~~lae~L~~~~p~~~~--~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~ 177 (460)
T PRK12403 100 VIELSELLFSLLPGHYS--HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG 177 (460)
T ss_pred HHHHHHHHHHhCCCCcC--EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC
Confidence 34555667777753222 59999999999876554321 1 12233 444333 452211111 00 00 0
Q ss_pred ---cEEEEEeCCCC-----C------cccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCC
Q 021539 193 ---SKVIAAPETWL-----D------LRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNA 251 (311)
Q Consensus 193 ---~~V~~vp~~~~-----~------g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g 251 (311)
..+..+|.... + .....+++++.+.+..+ .....|.+ +.+ ..|.+.| ++.+.+ |+++|
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~-~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g 256 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA-ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYD 256 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC-CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 11223331100 0 00012445555532111 12334444 333 4688888 888865 69999
Q ss_pred cEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 252 WHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 252 ~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++++|=+|...|..-- +.-...||++++ =|++-|+ | +|+++.+++..+
T Consensus 257 ~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gK~lggG~~P--iga~v~~~~i~~ 311 (460)
T PRK12403 257 VLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSI--AKGLTSGYVP--MGGLVLSKRIAE 311 (460)
T ss_pred CEEEEeccccCCCcCchhhhhhhcCCCCCeEEE--cccccccccc--eEEEEECHHHHH
Confidence 99999999963243321 111246999985 5856553 5 788888876543
No 329
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.82 E-value=0.086 Score=57.84 Aligned_cols=151 Identities=12% Similarity=0.061 Sum_probs=85.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHH---HHHHHHHhcCCCCCCCEE-EEccCcC--hHHHHHHHHhCCcEEEEEeCCC
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYK---EAMLMIGESYPFFKGNYY-LTIISEE--SDYIKGFAAQKESKVIAAPETW 202 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaT---ealnlv~~s~~~~~Gd~I-ls~~eh~--~~~~~~la~~~G~~V~~vp~~~ 202 (311)
-+-+.-|+++.|.+-.. --.-.++| ||+.+..+.-. .+.+.+ ++..-|+ ...++..++..|++++.-
T Consensus 127 ~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~-~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~---- 199 (954)
T PRK12566 127 LNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAK-SKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD---- 199 (954)
T ss_pred HHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhh-cCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc----
Confidence 36677899999885221 11122333 55655443211 123455 4455566 345566666678887641
Q ss_pred CCcccCHHHHHhhhhccCCCCCceEEEEec---ccccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccCCCCCCCcE
Q 021539 203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV---VVNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLALALHRPDL 277 (311)
Q Consensus 203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~---~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pldl~~l~~Df 277 (311)
++++.+..+ ++++.. +..|.+.++++|.+ +|++|++++ +++-.+. +.+. .-.++++|+
T Consensus 200 --------~~~~~~~~~-------~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~-~Pge~GADI 262 (954)
T PRK12566 200 --------AVDNLAAHA-------VFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLT-PPGELGADV 262 (954)
T ss_pred --------chhhcCCCC-------EEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCC-ChhhcCCcE
Confidence 122333322 333322 26899999999955 799999854 4443320 1111 124579999
Q ss_pred EEEccccC----cCCCCCceEEEEEeCCCCc
Q 021539 278 VLCTLDNN----THAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~----l~G~P~GiG~L~vr~~~~~ 304 (311)
++.+++-- -||+| +.|++-++++...
T Consensus 263 ~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~R 292 (954)
T PRK12566 263 VLGSTQRFGVPMGYGGP-HAAYFACRDDYKR 292 (954)
T ss_pred EeeCCCcCCCCCCCCCC-CeeeeeehHHHHh
Confidence 98887751 24557 7999998876543
No 330
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=95.80 E-value=0.071 Score=53.13 Aligned_cols=133 Identities=15% Similarity=0.007 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHcCCC----CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEE-E
Q 021539 125 SIPEIQARNRALKHCGLS----EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIA-A 198 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~----~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~-v 198 (311)
++-++-.|+.||+++-.. .+..+|..|.||+.|++.++.-+--.+.+-|+.++ .++.-.. .++...+..|-+ +
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsA-ti~l~~~~~v~YyL 190 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSA-TISLLGGTQVPYYL 190 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHH-HHHHhCCcccceee
Confidence 344567999999998631 12235999999999998877655333445565444 3332111 111122444444 4
Q ss_pred eCCCCCcccCHHHHHhhhhccCCCCC-ceEEEE-ecccccchhcHHHHHH----HHHCCcEEEeccc
Q 021539 199 PETWLDLRIKGSQLSQNFRRKCKYTP-KGLFSY-PVVVNGTRYSMHWISE----AHRNAWHVLLDAT 259 (311)
Q Consensus 199 p~~~~~g~id~~~L~~~l~~~~~~~~-t~LVs~-~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAa 259 (311)
.... +=.+|.++|++.+.+..++.+ +.||++ +.+-||..+.-+-|.. |+++|..++-|=+
T Consensus 191 dEe~-~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 191 DEES-NWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred cccc-CCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence 3321 123688899888876544433 345555 4557998887655532 5789999998865
No 331
>PRK07482 hypothetical protein; Provisional
Probab=95.80 E-value=0.13 Score=52.07 Aligned_cols=90 Identities=17% Similarity=0.177 Sum_probs=53.5
Q ss_pred HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDL 277 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Df 277 (311)
.+.+++.+....+ ....-|.+ +.+ ..|.+.| ++++.+ |+++|+++++|=+|.-.|..- .+.-...||+
T Consensus 206 ~~~l~~~~~~~~~-~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDi 284 (461)
T PRK07482 206 ADELEELILAEGP-DTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDL 284 (461)
T ss_pred HHHHHHHHHhcCC-CcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCE
Confidence 4567777753211 11333333 333 4677755 234544 689999999999998325332 1122346999
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCC
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSF 303 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~ 303 (311)
++++ |++-|+ | +|+++++++..
T Consensus 285 v~~g--Kgl~gG~~P--i~av~~~~~i~ 308 (461)
T PRK07482 285 ITVA--KGLTSAYAP--LSGSIVGEKVW 308 (461)
T ss_pred EEEc--cccccCccc--cceeeecHHHH
Confidence 9984 856553 4 68888887653
No 332
>PRK06541 hypothetical protein; Provisional
Probab=95.78 E-value=0.11 Score=52.58 Aligned_cols=89 Identities=13% Similarity=0.203 Sum_probs=56.3
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCcccC--C--CCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQLA--L--ALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pld--l--~~l~~Df 277 (311)
+.+++.+... .......|.+ +.+ ..|.+.| +++|.+ |+++|+++++|=+| .+ |..--- . ....+|+
T Consensus 208 ~~l~~~l~~~-~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGf-GR~G~~~a~~~~gv~PDi 285 (460)
T PRK06541 208 DRIEEAIEFE-GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAF-GRLGEMFGCERFGYVPDI 285 (460)
T ss_pred HHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCchhhhhhhcCCCCCE
Confidence 5677777531 1112445544 333 5788888 788865 69999999999999 45 533221 1 1246999
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++ =|++-|+ | +|+++.+++..+
T Consensus 286 vt~--gK~l~~G~~p--igav~~~~~i~~ 310 (460)
T PRK06541 286 ITC--AKGITSGYSP--LGAMIASDRLFE 310 (460)
T ss_pred EEe--cccccCCccc--eeEEEEcHHHHH
Confidence 875 5844432 4 899999876543
No 333
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=95.62 E-value=0.59 Score=46.59 Aligned_cols=171 Identities=11% Similarity=0.069 Sum_probs=87.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHH-----HhCCc-----EE
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFA-----AQKES-----KV 195 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la-----~~~G~-----~V 195 (311)
+.-+++++++... ....+.|+.++|||+..++.- ..+.....|++.. .+|. .....+. .+.++ .+
T Consensus 87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 165 (421)
T PRK09792 87 TLAEKINALAPVS-GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV 165 (421)
T ss_pred HHHHHHHHhCCCC-CCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence 3334456655321 223599999999988765441 1122224565433 3441 1111110 01111 23
Q ss_pred EEEeCCCCCccc----CHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecccccCcc
Q 021539 196 IAAPETWLDLRI----KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDATGLVFG 264 (311)
Q Consensus 196 ~~vp~~~~~g~i----d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAaQsv~G 264 (311)
..+|.......+ +.+.+++.++........+.|.+ +.+ ..|.+. | +++|.+ |+++|+++++|=+|.-.|
T Consensus 166 ~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK09792 166 YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245 (421)
T ss_pred EEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 344442111111 23677777763111112344444 333 478765 6 556654 689999999999988324
Q ss_pred Ccc--cCCC--CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 265 EDQ--LALA--LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 265 ~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
..- .-++ ...+|++++ =|++-|+ --+|+++.++++.+
T Consensus 246 r~G~~~a~~~~~~~pDi~t~--gK~l~~G-~pigav~~~~~i~~ 286 (421)
T PRK09792 246 RTGKLFAMDHYADKPDLMTM--AKSLAGG-MPLSGVVGNANIMD 286 (421)
T ss_pred CCCchhHHHhcCCCCcEEEe--ehhhcCC-CceEEEEEcHHHHh
Confidence 322 1122 246897665 5844432 22899998876544
No 334
>PLN02397 aspartate transaminase
Probab=95.62 E-value=0.2 Score=49.84 Aligned_cols=164 Identities=9% Similarity=-0.029 Sum_probs=89.7
Q ss_pred HHHHHHHHHHcCCCCC----CCeE--EEeCCHHHHHHHHHhcC-CCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeC-
Q 021539 129 IQARNRALKHCGLSED----EYLV--LFVPNYKEAMLMIGESY-PFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPE- 200 (311)
Q Consensus 129 e~aR~~IA~~Lga~~d----ey~V--vFTsnaTealnlv~~s~-~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~- 200 (311)
.+.|+.|++++.-... +..| +-|.+++.+..++...+ .+.+||.|+...=..... ...++..|.++..+|.
T Consensus 94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y-~~~~~~~g~~~~~v~l~ 172 (423)
T PLN02397 94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNH-HNIFRDAGVPVRTYRYY 172 (423)
T ss_pred HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhH-HHHHHHcCCeEEEeecc
Confidence 3688888887742210 1123 22344444433322211 124899886322111122 2334556999988886
Q ss_pred CCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEeccccc-Cc-cC-----cc
Q 021539 201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGL-VF-GE-----DQ 267 (311)
Q Consensus 201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQs-v~-G~-----~p 267 (311)
+.++..+|.+.+.+.++... .++.++.+ +++=||.+++.+++. + |+++|++++.|=+=. ++ +. .+
T Consensus 173 ~~~~~~~d~~~l~~~l~~~~--~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~ 250 (423)
T PLN02397 173 DPKTRGLDFDGLLEDLKAAP--DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQS 250 (423)
T ss_pred cCcCCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHH
Confidence 22234578888877776321 12455554 344699999987763 2 478999999997632 10 10 01
Q ss_pred c-CCCCCCC-cEEEEccccCcCCCCCc--eEEEE
Q 021539 268 L-ALALHRP-DLVLCTLDNNTHAQPLK--ITCLL 297 (311)
Q Consensus 268 l-dl~~l~~-Dfl~~S~HK~l~G~P~G--iG~L~ 297 (311)
+ .+...+. =+++.|+=| .|| +.| +|+++
T Consensus 251 ~~~~~~~~~~vI~~~SfSK-~~~-~~G~RvG~~v 282 (423)
T PLN02397 251 VRMFVEDGHEILVAQSYAK-NMG-LYGERVGALS 282 (423)
T ss_pred HHHHHhcCCcEEEEEECcc-cCC-CccccceEEE
Confidence 1 1111111 256779999 888 556 68885
No 335
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=95.60 E-value=0.026 Score=57.05 Aligned_cols=116 Identities=10% Similarity=0.053 Sum_probs=74.9
Q ss_pred HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cccc--cchhcHHHHHH-HHHCCcEEEeccc
Q 021539 184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VVVN--GTRYSMHWISE-AHRNAWHVLLDAT 259 (311)
Q Consensus 184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~~t--G~i~Pi~~I~~-a~~~g~~vlvDAa 259 (311)
+...+---|++.+.+|.+. +-.+..+.|++++.++....-+.++++. .-.| -..-+|+++.. |+++|+++|||||
T Consensus 195 veka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAA 273 (511)
T KOG0628|consen 195 VEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAA 273 (511)
T ss_pred HHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehh
Confidence 4433434478899999886 5678899999988865322112333332 1123 34466888865 6999999999998
Q ss_pred cc----CccCcccCCCC-CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539 260 GL----VFGEDQLALAL-HRPDLVLCTLDNNTHAQPLKITCLLVRRK 301 (311)
Q Consensus 260 Qs----v~G~~pldl~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~ 301 (311)
=+ +|.-.+--++- -.+|-+.++.|||++- -..+-.||+|++
T Consensus 274 YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~v-nfDCs~lWvkd~ 319 (511)
T KOG0628|consen 274 YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLV-NFDCSPLWVKDG 319 (511)
T ss_pred hccccccCHHHHHHhhcchhhccccCChhheeEE-eeeeecceeecC
Confidence 66 21211111221 2489999999996554 457888999987
No 336
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.59 E-value=0.3 Score=49.18 Aligned_cols=167 Identities=14% Similarity=0.109 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HH-HHHHHHh-CC-cEE-EEE-
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DY-IKGFAAQ-KE-SKV-IAA- 198 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~-~~~la~~-~G-~~V-~~v- 198 (311)
..+.-+++.+.+... ...|.|+.++|||+..+++- ..+.....|++.. .+|. +. +..+.-. .. ... ...
T Consensus 95 ~~~la~~L~~~~~~~--~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~ 172 (433)
T PRK00615 95 EILFAEELFSYLGLE--DHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVD 172 (433)
T ss_pred HHHHHHHHHHhCCCC--cCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCC
Confidence 334455566666432 23599999999988765441 1122224565433 2342 11 1111000 00 000 000
Q ss_pred --eCCCCCc---ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHH----HHHH-HHHCCcEEEecccccCccC-
Q 021539 199 --PETWLDL---RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMH----WISE-AHRNAWHVLLDATGLVFGE- 265 (311)
Q Consensus 199 --p~~~~~g---~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~----~I~~-a~~~g~~vlvDAaQsv~G~- 265 (311)
+...... --+.+++++.+.... .....|.+..+ ..|.+.|.. .|.+ |+++|+++++|=+|. |-
T Consensus 173 ~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t--G~R 248 (433)
T PRK00615 173 TDLAHPLTLSLPYNDFQIFQTVMNSLG--HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT--GFR 248 (433)
T ss_pred CCCCCCCeEeCCCCCHHHHHHHHHhcC--CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc--ccc
Confidence 0000000 014678888886421 12445554333 368888854 6755 689999999999994 32
Q ss_pred -ccc---CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539 266 -DQL---ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD 304 (311)
Q Consensus 266 -~pl---dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~ 304 (311)
... ......||++++ =|++-| +| +|++..+++..+
T Consensus 249 ~G~~ga~~~~gv~PDi~~~--gK~lggG~p--~~av~~~~~i~~ 288 (433)
T PRK00615 249 VAQGGAAAIYHVKPDITVY--GKILGGGLP--AAAVVAHKSIMD 288 (433)
T ss_pred ccHhHHHHhcCCCCCeEEE--cccccCCcc--eeeeeecHHHHh
Confidence 110 111246999875 684543 24 788888877644
No 337
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=95.54 E-value=0.14 Score=51.67 Aligned_cols=89 Identities=11% Similarity=0.197 Sum_probs=55.5
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCc--c--cCCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGED--Q--LALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~--p--ldl~~l~~Df 277 (311)
+++++.++.. +......|.+ +.+ ..|.+.| ++++.+ |+++|+++++|=+|. + |.. . .+.....||+
T Consensus 205 ~~l~~~i~~~-~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~-GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 205 DDLERLVALH-DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGF-GRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHhc-CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC-CcCchhhHHHhcCCCCCE
Confidence 4667777532 1112444444 333 5799999 888866 699999999999995 4 531 1 1222246898
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
++++ |++-|+ | +|+++.+++..+
T Consensus 283 ~~~g--K~l~gG~~P--i~av~~~~~i~~ 307 (445)
T PRK09221 283 ITFA--KGLTNGAIP--MGAVIASDEIYD 307 (445)
T ss_pred EEec--cccccCccc--ceeeEEcHHHHH
Confidence 8776 634432 4 788888876543
No 338
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=95.54 E-value=0.57 Score=47.61 Aligned_cols=170 Identities=11% Similarity=0.038 Sum_probs=90.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEccC-cC--hHHHHHHH-----HhCC-----cEE
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTIIS-EE--SDYIKGFA-----AQKE-----SKV 195 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~e-h~--~~~~~~la-----~~~G-----~~V 195 (311)
+.=+++.+++-.+ ....+.|+.++|||+..++.-- ....+..|++... .| ......+. .+.| ..|
T Consensus 103 ~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v 181 (447)
T COG0160 103 ELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGV 181 (447)
T ss_pred HHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCe
Confidence 3334445544442 2345999999999988765421 1123345665443 44 11111111 1111 236
Q ss_pred EEEeCCCCCc-----------ccCHHHHHhhhhcc-CCCCCceEEEE-ecc-cccchhc-HHH---HHH-HHHCCcEEEe
Q 021539 196 IAAPETWLDL-----------RIKGSQLSQNFRRK-CKYTPKGLFSY-PVV-VNGTRYS-MHW---ISE-AHRNAWHVLL 256 (311)
Q Consensus 196 ~~vp~~~~~g-----------~id~~~L~~~l~~~-~~~~~t~LVs~-~~~-~tG~i~P-i~~---I~~-a~~~g~~vlv 256 (311)
..+|...+.. .-..+.+++++... .......-+.+ +.+ +-|.+.| -.+ +.+ |+++|+++++
T Consensus 182 ~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~ 261 (447)
T COG0160 182 YHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIA 261 (447)
T ss_pred EEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6666532111 11234455544432 11112222332 444 5787765 334 433 6899999999
Q ss_pred cccccCccCcc--cCCC--CCCCcEEEEccccCcCCC-CCceEEEEEeCCCCc
Q 021539 257 DATGLVFGEDQ--LALA--LHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFD 304 (311)
Q Consensus 257 DAaQsv~G~~p--ldl~--~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~ 304 (311)
|=+|+-+|..- +-++ ...||.++++ |.+-|+ | +|+++.|++..+
T Consensus 262 DEVQtG~GRTG~~fa~E~~gv~PDivt~a--K~ig~G~P--l~avv~r~ei~~ 310 (447)
T COG0160 262 DEVQTGFGRTGKMFAFEHFGVEPDIVTLA--KSLGGGLP--LSAVVGRAEIMD 310 (447)
T ss_pred eccccCCCccccchhhhhcCCCCCEEEec--ccccCCCc--eeEEeccHHhcc
Confidence 99998544332 1122 2359999987 755542 4 888999988766
No 339
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.52 E-value=0.05 Score=55.00 Aligned_cols=159 Identities=13% Similarity=0.132 Sum_probs=97.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i 207 (311)
.++-+.+|+|+|+. +- ++|--| +|-++|+ -++ ..+|..|+|.--.|.+ ++.-|+-.|+.++...-+
T Consensus 185 kelE~l~A~f~g~e-~a--~vF~mGf~TNs~~~--p~l-~~~gsLIiSDelNHaS-i~~GaRLSgAtiRVfkHN------ 251 (519)
T KOG1357|consen 185 KELEELVARFLGVE-DA--IVFSMGFATNSMNI--PSL-LGKGSLIISDELNHAS-LITGARLSGATTRVFRHN------ 251 (519)
T ss_pred HHHHHHHHHhcCCc-ce--EEEeccccccccCc--cee-ecCCcceeeccccchh-eeccccccCceEEEEecC------
Confidence 47888899999995 33 888765 2323322 222 3577777764433322 322244568888887764
Q ss_pred CHHHHHhhhhc-------cCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------
Q 021539 208 KGSQLSQNFRR-------KCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--------- 267 (311)
Q Consensus 208 d~~~L~~~l~~-------~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--------- 267 (311)
+..+|++.|++ ++..- ++.+|++-.. .-|.+-.+.+|.+ .+++.+++++|.+|++ |...
T Consensus 252 dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSi-GA~g~tGrgvce~ 330 (519)
T KOG1357|consen 252 DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSI-GAMGATGRGVCEY 330 (519)
T ss_pred CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccc-cccCCCCcceeec
Confidence 23455555542 22111 1234444333 3799999988855 5889999999999999 8762
Q ss_pred cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
.-++..++|.+-.++-| .||+ +-|.+--+++..+
T Consensus 331 ~g~d~~dvDImMGtftK-Sfga--~GGyiagsk~lid 364 (519)
T KOG1357|consen 331 FGVDPEDVDIMMGTFTK-SFGA--AGGYIAGSKELID 364 (519)
T ss_pred cCCCchhheeecceehh-hccc--ccceecCcHHHHh
Confidence 12444679999999999 8873 3344444444433
No 340
>PRK07480 putative aminotransferase; Validated
Probab=95.52 E-value=0.21 Score=50.50 Aligned_cols=66 Identities=14% Similarity=0.127 Sum_probs=46.1
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRK 301 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~ 301 (311)
..|.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.....||+++++ |++-|+ | +|+++++++
T Consensus 231 ~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~P--i~av~~~~~ 305 (456)
T PRK07480 231 AGGVIIPPATYWPEIQRICRKYDILLVADEVICGF-GRTGEWFGSQHFGIKPDLMTIA--KGLTSGYIP--MGAVGVGDR 305 (456)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCcchhhhhhcCCCCCeeeee--hhhccCCcc--ceEEEEcHH
Confidence 4688877 667755 689999999999996 4 5332 12223569998874 855552 4 789999877
Q ss_pred CCc
Q 021539 302 SFD 304 (311)
Q Consensus 302 ~~~ 304 (311)
..+
T Consensus 306 i~~ 308 (456)
T PRK07480 306 VAE 308 (456)
T ss_pred HHH
Confidence 644
No 341
>PRK05965 hypothetical protein; Provisional
Probab=95.39 E-value=0.29 Score=49.49 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=54.4
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhcH----HHHHH-HHHCCcEEEecccccCccCcc--c--CCCCCCCcEE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSM----HWISE-AHRNAWHVLLDATGLVFGEDQ--L--ALALHRPDLV 278 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi----~~I~~-a~~~g~~vlvDAaQsv~G~~p--l--dl~~l~~Dfl 278 (311)
+.+++.+.... .....-|.+ +.+ ..|.+.|= +.+.+ |+++|+++++|=+|.-.|..- + +.-...||++
T Consensus 202 ~~l~~~i~~~~-~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 202 AALRAKVAELG-ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHhcC-CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence 45677775321 012333333 433 46776653 34544 689999999999998325332 1 1122469999
Q ss_pred EEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 279 LCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 279 ~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++ |++-|+ | +|++++++++.+
T Consensus 281 ~~g--Kgl~gG~~P--i~av~~~~~i~~ 304 (459)
T PRK05965 281 TVA--KGLTSGYVP--MGAVLMSDHVYQ 304 (459)
T ss_pred Eec--hhhccCCcc--eeEEEEcHHHHH
Confidence 985 756554 5 899999887653
No 342
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=95.25 E-value=0.85 Score=45.92 Aligned_cols=172 Identities=11% Similarity=0.068 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChH--HHHHHHH-----hC--
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEESD--YIKGFAA-----QK-- 191 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~--~~~~la~-----~~-- 191 (311)
.....+.-+++++++.... ...|.|+.++|||+..++. .+ .....|++.. .+|.. ....+.. +.
T Consensus 84 ~~~~~~lae~L~~~~p~~~-~~~v~f~~SGseA~e~AiklAr~~--tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDF-EKRVTFGLSGSDANDGIIKFARAY--TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred CHHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHh--hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 3444456666777664321 1359999999999876554 33 2223455432 34411 1111110 00
Q ss_pred C---cEEEEEeCCCCC----cccC-------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHC
Q 021539 192 E---SKVIAAPETWLD----LRIK-------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRN 250 (311)
Q Consensus 192 G---~~V~~vp~~~~~----g~id-------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~ 250 (311)
+ ..+..+|..... +..+ .+++++.+........+..|.+ +.+ ..|.+.| +++|.+ |+++
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~ 240 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH 240 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1 123344432110 0011 1334444432100012444444 333 4687777 777755 6899
Q ss_pred CcEEEeccccc-CccCccc----CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539 251 AWHVLLDATGL-VFGEDQL----ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD 304 (311)
Q Consensus 251 g~~vlvDAaQs-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~ 304 (311)
|+++++|=+|. + |..-- +.-...+|++++ =|++-| .| +|+++.++++.+
T Consensus 241 g~llI~DEv~tg~-GrtG~~~a~~~~gv~pDi~t~--gK~l~~G~p--~gav~~~~~i~~ 295 (445)
T PRK08593 241 GILFAVDDIQQGL-GRTGKWSSISHFNITPDLMSF--GKSLAGGMP--MSAIVGRKEIME 295 (445)
T ss_pred CCEEEEechhhCC-CcCchHHHHHhcCCCCCEeee--cccccCCcc--cEEEEEcHHHHh
Confidence 99999999984 4 53221 111246898876 474443 23 888888876644
No 343
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.24 E-value=0.42 Score=47.70 Aligned_cols=161 Identities=17% Similarity=0.094 Sum_probs=88.2
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHHHh----------CCc-
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFAAQ----------KES- 193 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la~~----------~G~- 193 (311)
.+.-+++.+++.- ...|.|+.++|||+..++.- ..+.....|++.. .+|. .....+... .|+
T Consensus 96 ~~la~~l~~~~p~---~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~ 172 (428)
T PRK12389 96 IEFAKMLKEAIPS---LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVP 172 (428)
T ss_pred HHHHHHHHHhCCC---CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCC
Confidence 4455555555531 22599999999998765441 1122234565433 3441 111111100 011
Q ss_pred -----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc
Q 021539 194 -----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL 261 (311)
Q Consensus 194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs 261 (311)
.+..+|.+ +.+.+++.+.... .....|.+ +.+ ..|.+.| ++++.+ |+++|+++++|=+|.
T Consensus 173 ~~~~~~~~~~~~~------d~~~l~~~l~~~~--~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t 244 (428)
T PRK12389 173 KSIAQEVITVPFN------DIEALKEALDKWG--DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244 (428)
T ss_pred CcccCceEEcCCC------CHHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 11122221 4678888886421 12344444 333 4788888 888866 699999999999998
Q ss_pred CccCccc---CCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCCc
Q 021539 262 VFGEDQL---ALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFD 304 (311)
Q Consensus 262 v~G~~pl---dl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~ 304 (311)
-...... ..-...||++++ =|++-|+ | +|++..+++..+
T Consensus 245 G~Rt~~~~a~~~~gv~PDivt~--gK~lggG~P--i~av~~~~~i~~ 287 (428)
T PRK12389 245 AFRFMYGGAQDLLGVEPDLTAL--GKIIGGGLP--IGAYGGRKDIME 287 (428)
T ss_pred ccccCcchhhHHhCCCCCeeee--chhhcCCCc--eeEEeEHHHHHh
Confidence 4121110 111246999766 5855432 3 788888876654
No 344
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=95.22 E-value=0.45 Score=48.20 Aligned_cols=168 Identities=16% Similarity=0.116 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcC--h-HHHHHHHH----hCC
Q 021539 124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEE--S-DYIKGFAA----QKE 192 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~--~-~~~~~la~----~~G 192 (311)
......+.-+++++++.... ..|.|+++++||+..++. .+ ....+|++.. .+| . ..+ .+.. +.+
T Consensus 111 ~~~~~~~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~ 185 (459)
T PRK06082 111 TNETAIECAEKLTEIAGGEL--NRVLFAPGGTSAIGMALKLARHI--TGNFKVVSLWDSFHGASLDAI-SVGGEACFRQG 185 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCC--CEEEECCCcHHHHHHHHHHHHHh--cCCCEEEEEeCCCcCccHHHH-hhcCCcccccC
Confidence 34444566666777765321 259999999998876543 33 2234565433 233 1 111 1110 000
Q ss_pred -----cEEEEEeCCCC----Cccc------CHHHHHhhhhccCCCCCceEEEE-ecccccc-hhc---HHHHHH-HHHCC
Q 021539 193 -----SKVIAAPETWL----DLRI------KGSQLSQNFRRKCKYTPKGLFSY-PVVVNGT-RYS---MHWISE-AHRNA 251 (311)
Q Consensus 193 -----~~V~~vp~~~~----~g~i------d~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~-i~P---i~~I~~-a~~~g 251 (311)
..+..+|.... .... ..+++++.++.. + ....|.+ +.+..|. ..| ++++.+ |+++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~--~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g 262 (459)
T PRK06082 186 MGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-G--GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHN 262 (459)
T ss_pred CCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-C--CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11233332100 0000 124567777532 1 2344443 2222354 345 567755 68999
Q ss_pred cEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCC
Q 021539 252 WHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSF 303 (311)
Q Consensus 252 ~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~ 303 (311)
+++++|=+|.-.|..-- ..-...||++++ =|++-|+ | +|+++.+++..
T Consensus 263 ~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~P--~~av~~~~~i~ 316 (459)
T PRK06082 263 VLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCI--GKGLGGGLVP--IAAMITKDKYN 316 (459)
T ss_pred CEEEEechhhCCCccchhhHhHhhCCCCCEEEe--cccccCCCCc--ceEEEEcHHHH
Confidence 99999999883243211 112346999985 5856553 4 68888887653
No 345
>PLN00144 acetylornithine transaminase
Probab=95.11 E-value=0.41 Score=47.03 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=55.2
Q ss_pred CHHHHHhhhhccCCCCCceEEEE-ecccccchhc-----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYS-----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD 276 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~P-----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D 276 (311)
+++.|++.++.. ..+.|.+ +.+-.|.+++ ++++.+ |+++|+++++|=+|.-.|... .+.....+|
T Consensus 155 d~~~l~~~~~~~----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 155 NLEAARKLIQKG----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CHHHHHHhcCCC----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 467788777532 2344444 4332243433 456654 689999999999988324332 124456799
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
++++ =|.+.|+ --+|+++.+++..+.
T Consensus 231 i~t~--sK~l~~G-~pig~v~~~~~~~~~ 256 (382)
T PLN00144 231 IMTL--AKPLAGG-LPIGAVLVTEKVASA 256 (382)
T ss_pred EEEe--cccccCC-cceEEEEEcHHHHhc
Confidence 6665 5855432 228999998776543
No 346
>PRK07046 aminotransferase; Validated
Probab=95.02 E-value=0.47 Score=47.97 Aligned_cols=159 Identities=10% Similarity=0.028 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEccC-cC--hH-HHHHHHH-----hC---Cc
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTIIS-EE--SD-YIKGFAA-----QK---ES 193 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~e-h~--~~-~~~~la~-----~~---G~ 193 (311)
...+.-+.+.+.+++ + .|.|+.++|||+..+++- ..+...+.|++..+ +| .+ .+..... +. |.
T Consensus 116 ~~~~lAe~l~~~~~~--~--~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 116 DAAWVGEELARRFGL--P--YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred HHHHHHHHHHHHhCC--C--EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 334555666676653 3 499999999998765442 11223355664332 34 12 1111100 00 11
Q ss_pred ------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539 194 ------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG 260 (311)
Q Consensus 194 ------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ 260 (311)
.+..+|.+ |.+++++.+..+ ....|.+ +.+ ..|.+.| ++.+.+ |+++|+++++|=+|
T Consensus 192 ~~~~~~~~~~~~~n------d~~~l~~~l~~~----~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~ 261 (453)
T PRK07046 192 VHDLTATTRVVEFN------DLAALEAALADG----DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH 261 (453)
T ss_pred CccccCceEeeCCC------CHHHHHHHhCCC----CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 11222221 567888888532 2344444 333 4677777 566755 68999999999999
Q ss_pred c----CccCcccCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCCcc
Q 021539 261 L----VFGEDQLALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFDT 305 (311)
Q Consensus 261 s----v~G~~pldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~~ 305 (311)
. . |-.. ..-...||++++ =|.+-|+ | +|++..|++..+.
T Consensus 262 tfr~g~-Gg~~-~~~gv~PDi~t~--gK~lggG~P--i~av~g~~~i~~~ 305 (453)
T PRK07046 262 TISSGP-GGYT-RAHGLEPDFLVV--GKPIAGGVP--CAVYGFSAELAER 305 (453)
T ss_pred cCccCC-cchh-HHhCCCccceee--hhhhcCCCc--ceeeeehHHHHHH
Confidence 5 3 3221 111346999986 5855543 4 8888888776543
No 347
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.98 E-value=0.14 Score=54.05 Aligned_cols=147 Identities=18% Similarity=0.148 Sum_probs=92.6
Q ss_pred eEEEeCCHHH----HHHHHHhcCCCCCCC---EE--EEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhh
Q 021539 147 LVLFVPNYKE----AMLMIGESYPFFKGN---YY--LTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFR 217 (311)
Q Consensus 147 ~VvFTsnaTe----alnlv~~s~~~~~Gd---~I--ls~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~ 217 (311)
.+.|-+|.-. +=-.++++|-..+|+ +| +-...|-.|... |.--|.+|+.|..+. +|.||..+|++...
T Consensus 599 ~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPAS--A~MagmkvvpV~~~~-~G~id~~dLk~kae 675 (1001)
T KOG2040|consen 599 SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPAS--AAMAGMKVVPVGCDA-NGNIDMVDLKAKAE 675 (1001)
T ss_pred ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhh--HHhcCCEEEEeeccC-CCCccHHHHHHHHH
Confidence 4888876533 122455666544553 33 222334433321 122389999998886 79999999988876
Q ss_pred ccCCCCCceEEEEecc--c-ccchhc-HHHHHH-HHHCCcEEEecccccCccCccc-CCCCCCCcEEEEccccCcC----
Q 021539 218 RKCKYTPKGLFSYPVV--V-NGTRYS-MHWISE-AHRNAWHVLLDATGLVFGEDQL-ALALHRPDLVLCTLDNNTH---- 287 (311)
Q Consensus 218 ~~~~~~~t~LVs~~~~--~-tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv~G~~pl-dl~~l~~Dfl~~S~HK~l~---- 287 (311)
+.. ..|-+++.. + .|+.-+ |++|.. +|++|--|.+|++-.= .++-+ .-.+.+.|+--.+.|| .|
T Consensus 676 kh~----~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMN-AqVGlc~pGd~GaDV~HLNLHK-TFcIPH 749 (1001)
T KOG2040|consen 676 KHK----DNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMN-AQVGLCRPGDIGADVCHLNLHK-TFCIPH 749 (1001)
T ss_pred Hhh----hhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcc-ceecccCCccccccceeecccc-eeeecC
Confidence 542 345555433 3 576543 777755 6999999999998764 22221 2344689999999999 54
Q ss_pred --CCCCceEEEEEeCCCC
Q 021539 288 --AQPLKITCLLVRRKSF 303 (311)
Q Consensus 288 --G~P~GiG~L~vr~~~~ 303 (311)
|+| |+|=+-|++.+.
T Consensus 750 GGGGP-g~gPIgVK~HLa 766 (1001)
T KOG2040|consen 750 GGGGP-GMGPIGVKKHLA 766 (1001)
T ss_pred CCCCC-CCCccchhhhcc
Confidence 334 777777776554
No 348
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=94.85 E-value=0.81 Score=46.26 Aligned_cols=90 Identities=16% Similarity=0.249 Sum_probs=55.4
Q ss_pred HHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~D 276 (311)
.+.+++.++... ....-|.+ +. + ..|.+.| ++.+.+ |+++|+++++|=+|.-.|..-- +.-...||
T Consensus 208 ~~~l~~~l~~~~--~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PD 285 (453)
T PRK06943 208 LADVRRLFAERA--GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPD 285 (453)
T ss_pred HHHHHHHHHhCC--CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCC
Confidence 356677776321 12333433 42 4 4677655 334544 6899999999999973254321 11234699
Q ss_pred EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++++ |++-|+ | +|+++.++++.+
T Consensus 286 ivt~g--Kgl~gG~~P--i~av~~~~ei~~ 311 (453)
T PRK06943 286 FLCLS--KGISGGYLP--LSLVLSRDAIFA 311 (453)
T ss_pred eEeee--hhhccCccc--ceEEEEcHHHHH
Confidence 99994 756654 5 888999877654
No 349
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=94.84 E-value=1.1 Score=44.42 Aligned_cols=172 Identities=11% Similarity=0.060 Sum_probs=87.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCCCCCCCEEEEcc-CcC--hHHHHHHH-----HhCCc-----E
Q 021539 129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYPFFKGNYYLTII-SEE--SDYIKGFA-----AQKES-----K 194 (311)
Q Consensus 129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~~~~Gd~Ils~~-eh~--~~~~~~la-----~~~G~-----~ 194 (311)
.+.-+++++++... ....|.|+.++|||+..++. +..+.....|++.. .+| ......+. .+.++ .
T Consensus 79 ~~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (420)
T TIGR00700 79 VALAEKLNRIAPGS-GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPE 157 (420)
T ss_pred HHHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCC
Confidence 34445566665321 12359999999998876544 11122234565433 345 11111111 11121 2
Q ss_pred EEEEeCCCCCc------cc----CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539 195 VIAAPETWLDL------RI----KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLD 257 (311)
Q Consensus 195 V~~vp~~~~~g------~i----d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvD 257 (311)
+..+|...... .. +.+.+++.+...........|.+ +.+ .+|.+.| +++|.+ |+++|+++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~D 237 (420)
T TIGR00700 158 VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIAD 237 (420)
T ss_pred cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 33333311000 01 13456666531111112344444 333 5888888 667755 69999999999
Q ss_pred ccccCccCcc--c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 258 ATGLVFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 258 AaQsv~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
=+|.-.|... . +-....+|++++ =|.+.|+ --+|+++.++++.+
T Consensus 238 EV~tg~gr~g~~~a~~~~~~~pDi~~l--sK~l~~G-~pig~v~~~~~i~~ 285 (420)
T TIGR00700 238 EVQTGFARTGAMFACEHEGPEPDLITT--AKSLADG-LPLSGVTGRAEIMD 285 (420)
T ss_pred ecccCCcccchhHHHhhcCCCCCEEEe--eccccCC-cceEEEEecHHHHh
Confidence 9987324322 1 112246897764 5844432 22899999877654
No 350
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=94.83 E-value=0.57 Score=47.77 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=55.4
Q ss_pred CHHHHHhhhhccCCCCCceEEEEe-cc-cccchhcHH----HHHH-HHHCCcEEEecccccCccCcccC------CCCCC
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYSMH----WISE-AHRNAWHVLLDATGLVFGEDQLA------LALHR 274 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~Pi~----~I~~-a~~~g~~vlvDAaQsv~G~~pld------l~~l~ 274 (311)
|.+.+++.+.... .....|.+- .. ..|.+.|.. .+.+ |+++|+++++|=+|. |- ... .-...
T Consensus 232 d~~~l~~~l~~~~--~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t--Gf-R~g~~ga~~~~gv~ 306 (474)
T PLN02482 232 DLEAVKKLFEANK--GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT--GF-RIAYGGAQEYFGIT 306 (474)
T ss_pred ChHHHHHHHHhCC--CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--Ce-ecCcchHhHHhCCC
Confidence 4677888886421 123444443 33 468887743 4644 689999999999994 42 221 11236
Q ss_pred CcEEEEccccCcCC-CCCceEEEEEeCCCCcc
Q 021539 275 PDLVLCTLDNNTHA-QPLKITCLLVRRKSFDT 305 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~~ 305 (311)
||++++ =|++-| +| +|++..+++..+.
T Consensus 307 PDi~t~--gK~lggG~P--igav~g~~ei~~~ 334 (474)
T PLN02482 307 PDLTTL--GKVIGGGLP--VGAYGGRREIMEM 334 (474)
T ss_pred CCEEEe--cchhhCCCc--eEEEEEcHHHHHh
Confidence 899776 584443 24 7889888776543
No 351
>PRK07483 hypothetical protein; Provisional
Probab=94.61 E-value=0.53 Score=47.38 Aligned_cols=90 Identities=22% Similarity=0.242 Sum_probs=53.5
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-c-ccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-V-NGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~-tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~Df 277 (311)
+.+++.+... .......|.+ +.+ . -|.+.| ++.+.+ |+++|+++++|=+|.-.|..-- +.-...||+
T Consensus 186 ~~l~~~~~~~-~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILEL-GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhc-CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCe
Confidence 4566655421 1112334433 333 2 366666 556655 6899999999999982143221 111346999
Q ss_pred EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
++++ |++-|+ | +|++++++++.+
T Consensus 265 v~~g--K~l~gG~~P--i~av~~~~~i~~ 289 (443)
T PRK07483 265 VTIA--KGLGAGYQP--IGAVLASDRIYD 289 (443)
T ss_pred eeeh--hhhccCccc--cEEEEEcHHHHH
Confidence 9984 756553 4 899999877644
No 352
>PRK07481 hypothetical protein; Provisional
Probab=94.55 E-value=0.63 Score=46.89 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=49.2
Q ss_pred ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CC
Q 021539 225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PL 291 (311)
Q Consensus 225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~ 291 (311)
...|.+ +.+ ..|.+.| ++.+.+ |+++|+++++|=+|.-.|..- ...-...||+++++ |++-|+ |
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~P- 290 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVP- 290 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcC-
Confidence 344444 333 4677766 566655 689999999999988225421 12223469999984 855543 5
Q ss_pred ceEEEEEeCCCCc
Q 021539 292 KITCLLVRRKSFD 304 (311)
Q Consensus 292 GiG~L~vr~~~~~ 304 (311)
+|+++++++..+
T Consensus 291 -i~av~~~~~i~~ 302 (449)
T PRK07481 291 -LGATMVNARIAD 302 (449)
T ss_pred -ceEEEEcHHHHH
Confidence 788999876543
No 353
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=94.51 E-value=0.58 Score=47.50 Aligned_cols=90 Identities=18% Similarity=0.316 Sum_probs=55.4
Q ss_pred HHHHHhhhhccCCCCCceEEEE-e-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~D 276 (311)
++.+++.+.... .....|.+ + .+ ..|.+.| ++++.+ |+++|+++++|=+|.-.|..-- +.-...||
T Consensus 201 l~~le~~~~~~~--~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PD 278 (466)
T PRK07030 201 FAHMEQTLAEHH--DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPD 278 (466)
T ss_pred HHHHHHHHHhCC--CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCC
Confidence 345667775321 12344444 4 24 4677665 345654 6899999999999872253211 22234699
Q ss_pred EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++++ |++-|+ | +|++++++++.+
T Consensus 279 iv~~g--Kgl~gG~~P--i~av~~~~ei~~ 304 (466)
T PRK07030 279 FLCLS--KALTGGYLP--LAAVLTTDTVYQ 304 (466)
T ss_pred EEeee--hhccCCccc--ceEEEecHHHHH
Confidence 99994 756654 5 788998877643
No 354
>PRK07036 hypothetical protein; Provisional
Probab=94.47 E-value=0.78 Score=46.56 Aligned_cols=76 Identities=17% Similarity=0.274 Sum_probs=50.6
Q ss_pred ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--cCCC---CCCCcEEEEccccCcCCC--C
Q 021539 225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--LALA---LHRPDLVLCTLDNNTHAQ--P 290 (311)
Q Consensus 225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~---~l~~Dfl~~S~HK~l~G~--P 290 (311)
...|.+ +.+ ..|.+.| ++.+.+ |+++|+++++|=+|.-.|..- +-.+ ...||+++++ |++-|+ |
T Consensus 221 iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~P 298 (466)
T PRK07036 221 IAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQP 298 (466)
T ss_pred eEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccc
Confidence 344444 333 4788888 778865 699999999999995215432 1111 3469999884 855542 4
Q ss_pred CceEEEEEeCCCCc
Q 021539 291 LKITCLLVRRKSFD 304 (311)
Q Consensus 291 ~GiG~L~vr~~~~~ 304 (311)
+|+++.++++.+
T Consensus 299 --i~av~~~~~i~~ 310 (466)
T PRK07036 299 --LGAVIISERLLD 310 (466)
T ss_pred --cEEEEEcHHHHH
Confidence 799999877654
No 355
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=94.39 E-value=0.52 Score=47.57 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=73.4
Q ss_pred eEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCC-----
Q 021539 147 LVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCK----- 221 (311)
Q Consensus 147 ~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~----- 221 (311)
+|+.|.|.|.|+..+.+.+ ...|++|+..-.-...++.. .+..|++++.|+.+. +| ++++.|++.+.....
T Consensus 126 diiit~G~t~~l~~~l~~~-~N~gd~vlie~~ty~~AL~s-~~a~gv~~ipv~md~-~G-i~pE~l~~il~~w~~~~~k~ 201 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTL-INRGDHVLIEEYTYPSALQS-MEALGVKIIPVKMDQ-DG-IDPESLEEILSNWKPGSYKK 201 (472)
T ss_pred eEEEecCCchHHHHHHHHh-hcCCCceEEecccchHHHHh-ccccCceEEeccccC-CC-CCHHHHHHHHhcCCcccccC
Confidence 6999999999999998876 36788886322111333322 244587777777765 44 788999888864211
Q ss_pred CCCceEEEEe-cc-cccchhcHHH---H-HHHHHCCcEEEecccc
Q 021539 222 YTPKGLFSYP-VV-VNGTRYSMHW---I-SEAHRNAWHVLLDATG 260 (311)
Q Consensus 222 ~~~t~LVs~~-~~-~tG~i~Pi~~---I-~~a~~~g~~vlvDAaQ 260 (311)
.++.-|-+++ .+ =||.-++++. | ..|++++.+++.|=.=
T Consensus 202 ~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpY 246 (472)
T KOG0634|consen 202 PKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPY 246 (472)
T ss_pred CCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcc
Confidence 1223455664 23 5999999974 4 4579999999988643
No 356
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=94.38 E-value=0.17 Score=49.04 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=82.9
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH--HHHHHhCCcEEEEEeCCCCCccc
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI--KGFAAQKESKVIAAPETWLDLRI 207 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~--~~la~~~G~~V~~vp~~~~~g~i 207 (311)
+...+||+|-+-. + .|+ -++.-.|+..+.+.+ ..+.+-|+|.--.|.+.+ -.|+++++ -+
T Consensus 116 ~LE~kiAqfh~rE--D-~il-ypscfdANag~feai-l~pedAvfSDeLNhASIIdGirLckry~-------------h~ 177 (417)
T KOG1359|consen 116 LLESKIAQFHGRE--D-TIL-YPSCFDANAGAFEAI-LTPEDAVFSDELNHASIIDGIRLCKRYR-------------HV 177 (417)
T ss_pred HHHHHHHHHhCCC--c-eEE-eccccccchHHHHHh-cChhhhhhccccccchhhhhhHHHhhhc-------------cc
Confidence 4556789888762 2 244 444455555555554 345566665422232222 23555432 23
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCCCC
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALHRP 275 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l~~ 275 (311)
|.-.++..+...++. +.+||+...+ .-|-+-|+++|.. ++++|+++++|-+|+- |-.- +++. -++
T Consensus 178 dv~~l~~~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaT-gf~G~tGrGt~E~~~vm-~~v 254 (417)
T KOG1359|consen 178 DVFDLEHCLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHAT-GFFGETGRGTAEEFGVM-GDV 254 (417)
T ss_pred hhHHHHHHHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccc-eeecCCCCChHHHhCCC-Ccc
Confidence 344455444443432 2578887766 3799999999976 6899999999999985 4221 2222 369
Q ss_pred cEEEEccccCcCC
Q 021539 276 DLVLCTLDNNTHA 288 (311)
Q Consensus 276 Dfl~~S~HK~l~G 288 (311)
|.+..+.-| -.|
T Consensus 255 diinsTLgK-AlG 266 (417)
T KOG1359|consen 255 DIINSTLGK-ALG 266 (417)
T ss_pred eehhhhhhh-hhc
Confidence 999999999 554
No 357
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=94.23 E-value=1 Score=45.67 Aligned_cols=173 Identities=12% Similarity=0.086 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHH-----HhCCc----
Q 021539 127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFA-----AQKES---- 193 (311)
Q Consensus 127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la-----~~~G~---- 193 (311)
...+.-+++++.+... ...|.|+.++|||+..++.- ..+.....|++.. .+|. .....+. .+.++
T Consensus 97 ~~~~lae~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 97 RAIRVAEKLAEISPIE--NPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred HHHHHHHHHHhhCCCC--cCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 3345556666665432 13599999999988765442 1122334566433 3552 1111111 11111
Q ss_pred -EEEEEeCCCCCc-c------cCH--------HHHHhhhhcc-CCCCCceEEEE-ecc-cccchhc----HHHHHH-HHH
Q 021539 194 -KVIAAPETWLDL-R------IKG--------SQLSQNFRRK-CKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHR 249 (311)
Q Consensus 194 -~V~~vp~~~~~g-~------id~--------~~L~~~l~~~-~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~ 249 (311)
.+..+|...... . -+. +.+++.+... .......-|.+ +.+ ..|.+.| +++|.+ |++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 245555432110 0 011 2344444211 00112333333 333 4677766 345544 689
Q ss_pred CCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 250 NAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 250 ~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
+|+++++|=+|.-.|..- .+.-...||++++ =|++-|+ -++|+++.+++..+
T Consensus 255 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG-~pi~av~~~~~i~~ 310 (457)
T PRK05639 255 HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIF--GKGVASG-MGLSGVIGRKELMD 310 (457)
T ss_pred cCCEEEEechhhccCcCchHHHHHhcCCCCCEEEe--chhhcCC-CcceeEEehHHHHh
Confidence 999999999987214221 1112347999996 5866643 34899999887655
No 358
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=94.20 E-value=0.31 Score=47.38 Aligned_cols=201 Identities=11% Similarity=0.147 Sum_probs=105.5
Q ss_pred CCCCCCCCCccccccccchhHHHHhcCC------CCcchhhhhHHHHHH-HHHHHHHcCCCCCCCeEEEeCCHHHHHHHH
Q 021539 89 SSSPSFNFNDLDKSQLEPSRLLDILSKK------TSFKGNFISIPEIQA-RNRALKHCGLSEDEYLVLFVPNYKEAMLMI 161 (311)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~------ss~~G~~~~~~le~a-R~~IA~~Lga~~dey~VvFTsnaTealnlv 161 (311)
|||.- +|++| |..+.-+.+|++.. ..|.|.+-...+.++ -.-+-+-+|-+-.+.+|..|+|...++--+
T Consensus 38 GNPa~--iPem~--~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYl 113 (417)
T COG3977 38 GNPAR--IPEMD--DYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYL 113 (417)
T ss_pred CCccc--ChhHH--HHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHH
Confidence 45544 67754 44444455555433 244555544444333 222233444444455799999988776544
Q ss_pred HhcCC--CCCCC--EEEEccCcC----hHH-H-HH-HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE
Q 021539 162 GESYP--FFKGN--YYLTIISEE----SDY-I-KG-FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY 230 (311)
Q Consensus 162 ~~s~~--~~~Gd--~Ils~~eh~----~~~-~-~~-la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~ 230 (311)
..-|. ...|+ .|+.++.-+ .++ + .. +.. ..-+++.+|...=.-++|.++|. +.+ +++.+|+
T Consensus 114 fNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs-~kP~iel~~~g~FKY~vDF~~l~--i~e-----~~g~ic~ 185 (417)
T COG3977 114 FNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVS-AKPNIELLPAGQFKYHVDFEHLH--IGE-----STGAICV 185 (417)
T ss_pred HHHhcCccCCCcceeEeeccChhhccccccccCccceee-ccCCcccccccceeeccCHHHcc--ccc-----ccceEEe
Confidence 44332 12343 344332210 000 0 00 000 01122222221111245666554 222 2678888
Q ss_pred ecc--cccchhcHHHHH----HHHHCCcEEEecccccCccCcccCCCCC----CC-cEEEEccccCcCCCCC-ceEEEEE
Q 021539 231 PVV--VNGTRYSMHWIS----EAHRNAWHVLLDATGLVFGEDQLALALH----RP-DLVLCTLDNNTHAQPL-KITCLLV 298 (311)
Q Consensus 231 ~~~--~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~G~~pldl~~l----~~-Dfl~~S~HK~l~G~P~-GiG~L~v 298 (311)
+-- -||-+.-=+|+. .++++|+++++|-+=.+ +--.+.+++. +. =.+|+|.-| .|.|- .+|+.+.
T Consensus 186 SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~~~w~~NiilC~SLSK--~GLPG~R~GIiIa 262 (417)
T COG3977 186 SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDATPLWNENIILCMSLSK--LGLPGSRCGIIIA 262 (417)
T ss_pred cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceecccccccCCCCEEEEeehhh--cCCCCcceeEEEc
Confidence 633 589887666652 35899999999999887 5555555542 22 367889999 56562 3888888
Q ss_pred eCCCCc
Q 021539 299 RRKSFD 304 (311)
Q Consensus 299 r~~~~~ 304 (311)
+++++.
T Consensus 263 ne~viq 268 (417)
T COG3977 263 NEKVIQ 268 (417)
T ss_pred cHHHHH
Confidence 876643
No 359
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=94.00 E-value=0.63 Score=47.02 Aligned_cols=183 Identities=16% Similarity=0.086 Sum_probs=106.2
Q ss_pred chhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH---HhcCCCCCCCEEEE-ccCcC-
Q 021539 106 PSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMI---GESYPFFKGNYYLT-IISEE- 180 (311)
Q Consensus 106 ~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv---~~s~~~~~Gd~Ils-~~eh~- 180 (311)
...+.+.+.+-.+|. ......++-| +.|.+.+..- + .|=|++++|||.+.+ +++|. ..+.|+- .-.+|
T Consensus 75 ~~Av~~~l~~G~~fg-~Pte~Ei~~A-ell~~~~p~~-e--~vrfvnSGTEAtmsAiRlARa~T--gR~kIikF~G~YHG 147 (432)
T COG0001 75 VEAVQEQLERGLSFG-APTELEVELA-ELLIERVPSI-E--KVRFVNSGTEATMSAIRLARAYT--GRDKIIKFEGCYHG 147 (432)
T ss_pred HHHHHHHHHhcCCCC-CCCHHHHHHH-HHHHHhcCcc-c--EEEEecchhHHHHHHHHHHHHhh--CCCeEEEEcCCCCC
Confidence 445777777777764 4444444555 6666666652 2 399999999998865 44553 3456652 22223
Q ss_pred -hHHHHHHHH----------hCCc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcH
Q 021539 181 -SDYIKGFAA----------QKES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSM 241 (311)
Q Consensus 181 -~~~~~~la~----------~~G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi 241 (311)
.+.+.--+. ..|+ .+..+|.| |.+.++++++.... ...-|.+ +.+ -.|.+.|-
T Consensus 148 ~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~g~--~IAaVIvEPv~gn~g~i~p~ 219 (432)
T COG0001 148 HSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFEEYGD--DIAAVIVEPVAGNMGVVPPE 219 (432)
T ss_pred CccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHHHcCC--cEEEEEeccccCCCCCCCCC
Confidence 233211010 0011 23445554 56788888886421 1233333 333 37888885
Q ss_pred H----HHHH-HHHCCcEEEecccccCccCcccCC------CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539 242 H----WISE-AHRNAWHVLLDATGLVFGEDQLAL------ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST 309 (311)
Q Consensus 242 ~----~I~~-a~~~g~~vlvDAaQsv~G~~pldl------~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~ 309 (311)
+ .+.+ ++++|++++.|=+..- -++.+ -...||+.++ =| +.|+=-=+|++--|++..+...|.
T Consensus 220 ~~Fl~~Lr~lt~e~G~lLI~DEViTG---FR~~~gGaq~~~gi~PDlttl--GK-iIGGGlP~ga~gGr~eiM~~~~p~ 292 (432)
T COG0001 220 PGFLEGLRELTEEHGALLIFDEVITG---FRVALGGAQGYYGVEPDLTTL--GK-IIGGGLPIGAFGGRAEIMEQLAPL 292 (432)
T ss_pred HHHHHHHHHHHHHcCcEEEEecchhh---cccCCcccccccCcCcchhhh--hh-hhcCCcceeeeccHHHHHhhhCCC
Confidence 4 4444 5899999999987663 23332 1246898775 48 665412288888888887765554
No 360
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=93.77 E-value=0.8 Score=45.99 Aligned_cols=171 Identities=13% Similarity=0.107 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCCCEEEEcc-CcChHHH--HHHHH-----h
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKGNYYLTII-SEESDYI--KGFAA-----Q 190 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~Gd~Ils~~-eh~~~~~--~~la~-----~ 190 (311)
.....+.-+++++++... -..|.|+.++|||+..++. .+. -....+|++.. .+|.... ..+.. +
T Consensus 85 ~~~~~~la~~L~~~~p~~--~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~ 162 (428)
T PRK07986 85 HPPAIELCRKLVAMTPQP--LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMH 162 (428)
T ss_pred CHHHHHHHHHHHhhCCCC--cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhh
Confidence 333445555666665432 2359999999998776544 220 01224565433 3441111 11100 0
Q ss_pred --CC---cEEEEEeCCCCC-----cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCc
Q 021539 191 --KE---SKVIAAPETWLD-----LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAW 252 (311)
Q Consensus 191 --~G---~~V~~vp~~~~~-----g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~ 252 (311)
.+ ..+..+|..... ..-+.+++++.++... .....|.+ +. + ..|.+.| +++|.+ |+++|+
T Consensus 163 ~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~--~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~ 240 (428)
T PRK07986 163 SLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHR--HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGI 240 (428)
T ss_pred hccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCC--CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 00 112233321100 0113456777776321 12445544 32 3 3455432 566655 689999
Q ss_pred EEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCC
Q 021539 253 HVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSF 303 (311)
Q Consensus 253 ~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~ 303 (311)
++++|=+|.-.|..- .+.....||++++ =|.+.|+ | +|+++.++++.
T Consensus 241 lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~gG~~p--~~av~~~~~i~ 293 (428)
T PRK07986 241 LLIADEIATGFGRTGKLFACEHAGIAPDILCL--GKALTGGTMT--LSATLTTREVA 293 (428)
T ss_pred EEEEeccccCCccCCCeeeecccCCCCCEEEe--chhhhCCccc--CcchhchHHHH
Confidence 999999995213221 1222346899975 5855543 4 46666666554
No 361
>PRK06917 hypothetical protein; Provisional
Probab=93.29 E-value=2.4 Score=42.80 Aligned_cols=175 Identities=14% Similarity=0.096 Sum_probs=86.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-----CCC-CEEEEcc-CcC--hHHHHHHHHhC-
Q 021539 123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-----FKG-NYYLTII-SEE--SDYIKGFAAQK- 191 (311)
Q Consensus 123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-----~~G-d~Ils~~-eh~--~~~~~~la~~~- 191 (311)
.......+.-+++++++... ...|.|+.++|||+..+++-- .+ ..| ..|++.. .+| ......+....
T Consensus 71 ~~~~~~~~lae~L~~~~p~~--~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~ 148 (447)
T PRK06917 71 FTSEPAEKLAKKLSDLSPGD--LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPL 148 (447)
T ss_pred cCCHHHHHHHHHHHHhCCCC--CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 33444556777777776432 235999999999877654421 00 122 4565433 344 11111111000
Q ss_pred -----C---cEEEEEeCCCC-C---cc-------cCHHHHHhhhhccCCCCCceEEEE-ecc-cc-cchhc-H---HHHH
Q 021539 192 -----E---SKVIAAPETWL-D---LR-------IKGSQLSQNFRRKCKYTPKGLFSY-PVV-VN-GTRYS-M---HWIS 245 (311)
Q Consensus 192 -----G---~~V~~vp~~~~-~---g~-------id~~~L~~~l~~~~~~~~t~LVs~-~~~-~t-G~i~P-i---~~I~ 245 (311)
+ ..+..+|.... . +. -+.+.+++.++.... ....-|.+ +.+ .. |.+.| - +.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~-~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr 227 (447)
T PRK06917 149 RRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA-EHIAAFIAEPIIGAAGAAVVPPKGYYKVIK 227 (447)
T ss_pred ccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC-CceEEEEEeccccCcCceecCCHHHHHHHH
Confidence 0 01122221100 0 00 013456666653211 12333333 333 23 46655 3 3444
Q ss_pred H-HHHCCcEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 246 E-AHRNAWHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 246 ~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+ |+++|+++++|=+|.-.|..-- ..-...||++++ =|++-|+ | +|++..+++..+
T Consensus 228 ~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~--gK~l~~G~~P--i~a~~~~~~i~~ 289 (447)
T PRK06917 228 EICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTL--GKGLGAGYTP--IAATVVSDRVME 289 (447)
T ss_pred HHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEe--eehhccCCcc--eEEEEEcHHHHH
Confidence 4 6899999999999872143221 111246999877 4855543 5 788888876543
No 362
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=93.24 E-value=1.1 Score=44.94 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=41.9
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSF 303 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~ 303 (311)
..|.+.| ++++.+ |+++|+++++|=+|.-.|..- .......||++++ =|++-|+ +. +|+++.+++..
T Consensus 213 ~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~p-~~av~~~~~i~ 289 (422)
T PRK05630 213 AGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFMS-FAATLCTDKVA 289 (422)
T ss_pred cCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--echhhcCccc-cceeeccHHHH
Confidence 4566654 344544 689999999999995214321 1222356999976 5855342 32 57777777654
Q ss_pred c
Q 021539 304 D 304 (311)
Q Consensus 304 ~ 304 (311)
+
T Consensus 290 ~ 290 (422)
T PRK05630 290 Q 290 (422)
T ss_pred H
Confidence 4
No 363
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=93.09 E-value=2.5 Score=42.34 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=44.3
Q ss_pred HHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Df 277 (311)
+++++.+.... .....|.+. .+ ..|.+.| ++.|.+ |+++|+++++|-+|+ + |..- .+.....||+
T Consensus 206 ~~~~~~~~~~~--~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GrtG~~~a~~~~gv~PDi 282 (431)
T TIGR03251 206 RQARAAFAERP--HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGV-GLTGTAWAYQQLGVQPDI 282 (431)
T ss_pred HHHHHHHHhCC--CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcc-CccchHHHHHhcCCCCCE
Confidence 34555664321 124455543 33 4677652 556655 689999999999999 5 7652 2223357999
Q ss_pred EEEcccc
Q 021539 278 VLCTLDN 284 (311)
Q Consensus 278 l~~S~HK 284 (311)
++++-..
T Consensus 283 ~~~gK~~ 289 (431)
T TIGR03251 283 VAFGKKT 289 (431)
T ss_pred EEecccC
Confidence 9986443
No 364
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=93.06 E-value=3.1 Score=41.81 Aligned_cols=68 Identities=16% Similarity=0.247 Sum_probs=41.9
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--cCCCCC--CCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--LALALH--RPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~l--~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
..|.+.| +++|.+ |+++|++++.|=+|.-.|... +.+..+ .+|.++ .=|.+.++ --+|+++.++++.+
T Consensus 231 ~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t--~sK~l~~G-~pig~v~~~~~i~~ 307 (451)
T PRK06918 231 EGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLIT--VSKSLGAG-VPISGVIGRKEIMD 307 (451)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEe--eehhhcCC-CccEEEEEcHHHHh
Confidence 4577666 344544 689999999999987324322 222333 389665 56844432 22799998876544
No 365
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=92.78 E-value=2.8 Score=41.74 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=51.4
Q ss_pred CHHHHHhhhhccCCCCCceEEEE-ecccc-cchhc----HHHHHH-HHHCCcEEEecccccCccCcccCC----CCCCCc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSY-PVVVN-GTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLAL----ALHRPD 276 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~-~~~~t-G~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl----~~l~~D 276 (311)
+.+.+++.++++ +...|.+ +.+-+ |.+.| +.++.+ |+++|+++++|=+|.-.|...--+ ....+|
T Consensus 175 d~~~l~~~~~~~----~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pd 250 (408)
T PRK04612 175 DVEALEAAMAGG----DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD 250 (408)
T ss_pred CHHHHHHhhCCC----CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCC
Confidence 467788887532 2444444 44434 44443 455654 689999999999997325432111 123567
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
++++ =|++.|+ --+|+++.+++..
T Consensus 251 i~t~--~K~l~~G-~piga~~~~~~~~ 274 (408)
T PRK04612 251 IVTL--AKALGGG-FPIGAMLAGPKVA 274 (408)
T ss_pred EEEE--cchhcCC-CceEEEEECHHHH
Confidence 7766 5834322 1288888886543
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=92.70 E-value=1.4 Score=44.88 Aligned_cols=90 Identities=18% Similarity=0.277 Sum_probs=54.6
Q ss_pred HHHHHhhhhccCCCCCceEEEE-e-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D 276 (311)
.+.+++.+.... ....-|.+ + .+ ..|.+.| ++.+.+ |+++|+++++|=+|.-.|..- .+.....||
T Consensus 223 ~~~l~~~~~~~~--~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 223 ADALQALFEQSP--GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHhCC--CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCC
Confidence 455667775321 12344444 3 23 4677655 334544 689999999999998225432 122235699
Q ss_pred EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++++ |++-|+ | +|++++++++.+
T Consensus 301 iv~~g--Kgl~gG~~P--laav~~~~ei~~ 326 (472)
T PRK08742 301 LLCLS--KGLTGGFLP--LSAVLATQQLYD 326 (472)
T ss_pred EEEEc--ccccCCCCC--cceeeccHHHHH
Confidence 99994 856543 5 788988877643
No 367
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=92.62 E-value=1.1 Score=45.02 Aligned_cols=169 Identities=14% Similarity=0.087 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCC-CEEEEcc-CcChHHHHHHH-------H
Q 021539 125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKG-NYYLTII-SEESDYIKGFA-------A 189 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~G-d~Ils~~-eh~~~~~~~la-------~ 189 (311)
.....+.-+++++.+... -..|.|+.++|||+..++. .+. -++| ..|++.. .+|...+-.+. .
T Consensus 86 ~~~~~~lae~L~~~~p~~--~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 163 (429)
T PRK06173 86 HEPAVELAQKLLEILPPS--LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGM 163 (429)
T ss_pred CHHHHHHHHHHHhhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhh
Confidence 344445666666665322 2359999999998765433 220 0122 3465433 34421111110 0
Q ss_pred hCCc-----EEEEEeCCCCC-----cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchh-cHH---HHHH-HHHCC
Q 021539 190 QKES-----KVIAAPETWLD-----LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRY-SMH---WISE-AHRNA 251 (311)
Q Consensus 190 ~~G~-----~V~~vp~~~~~-----g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~-Pi~---~I~~-a~~~g 251 (311)
+.++ .+..+|..... ..-+++.|++.+.... ....-|.+ +. + +.|.+. |-+ ++.+ |+++|
T Consensus 164 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~--~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g 241 (429)
T PRK06173 164 HGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKG--DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYG 241 (429)
T ss_pred hhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCC--CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcC
Confidence 0011 12334431100 0113455677775321 12333333 43 4 456664 434 3444 58899
Q ss_pred cEEEecccccCccCcc------cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCC
Q 021539 252 WHVLLDATGLVFGEDQ------LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKS 302 (311)
Q Consensus 252 ~~vlvDAaQsv~G~~p------ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~ 302 (311)
+++++|=+|. |-.+ .+.....||++++ =|++.|+ .. +++++++++.
T Consensus 242 ~llI~DEv~t--G~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~~p-~~a~~~~~~i 294 (429)
T PRK06173 242 VLLIFDEIAT--GFGRTGKLFALEHAGVVPDIMCI--GKALTGGYLT-LSATITTEAI 294 (429)
T ss_pred CeEEecchhc--CCCcCCcchHHHhcCCCCCEEEe--ehhhhCCccc-cceEEecHHH
Confidence 9999999994 4322 1222346999985 5866554 22 5777777654
No 368
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=92.44 E-value=1.1 Score=45.27 Aligned_cols=171 Identities=13% Similarity=0.147 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCC---CCC-CEEEEcc-CcChHHH--HHHHH----hC
Q 021539 126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPF---FKG-NYYLTII-SEESDYI--KGFAA----QK 191 (311)
Q Consensus 126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~---~~G-d~Ils~~-eh~~~~~--~~la~----~~ 191 (311)
....+.-+++++++... ...|.|+.++|||+..++. .+.- .+| ..|++.. .+|.... ..+.. +.
T Consensus 99 ~~~~~lae~L~~~~p~~--~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~ 176 (460)
T PRK06916 99 VPSILLAEKLIEVVPEG--LKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQ 176 (460)
T ss_pred HHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccc
Confidence 33445666677776432 1359999999998776544 2100 122 4565433 3442111 11110 00
Q ss_pred C-----cEEEEEeCCC----C-Cc------ccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchh-cHH---HHHH-H
Q 021539 192 E-----SKVIAAPETW----L-DL------RIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRY-SMH---WISE-A 247 (311)
Q Consensus 192 G-----~~V~~vp~~~----~-~g------~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~-Pi~---~I~~-a 247 (311)
. ..+..+|... + .+ .-+.+.+++.++... .....|.+ +. + ..|.+. |-+ .+.+ |
T Consensus 177 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc 254 (460)
T PRK06916 177 VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH--EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLC 254 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC--CcEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 0 1223343210 0 00 012445667775321 12344444 42 3 457665 433 4444 6
Q ss_pred HHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539 248 HRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD 304 (311)
Q Consensus 248 ~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~ 304 (311)
+++|+++++|=+|.-.|..- .+.-...||++++ =|++-|+ | +|+++.++++.+
T Consensus 255 ~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~P--i~av~~~~ei~~ 313 (460)
T PRK06916 255 TKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTA--GKGLTGGYLP--IAITVTTDEIYN 313 (460)
T ss_pred HHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeee--ehhhhcCccc--cceeeecHHHHH
Confidence 89999999999986214322 1112346999987 4756654 4 888999876543
No 369
>PRK06149 hypothetical protein; Provisional
Probab=92.40 E-value=2.8 Score=46.43 Aligned_cols=67 Identities=10% Similarity=0.061 Sum_probs=47.1
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCcccCC-----CCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQLAL-----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pldl-----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
..|.+.| +++|.+ |+++|+++++|=+| .+ |..---+ ....||++++ =|++-|+ --+|+++.++++
T Consensus 756 ~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf-GRtG~~~~a~e~~gv~PDivt~--gK~lg~G-~Pl~av~~~~~i 831 (972)
T PRK06149 756 NAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY-GRLGHYFWGFEQQGVVPDIITM--AKGMGNG-HPLGAVITRREI 831 (972)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC-CccCccchhhhhcCCCCCEEEe--cccccCC-eeeEEEEEcHHH
Confidence 4688888 888865 69999999999999 34 5432101 2246999976 5856543 128999999876
Q ss_pred Cc
Q 021539 303 FD 304 (311)
Q Consensus 303 ~~ 304 (311)
.+
T Consensus 832 ~~ 833 (972)
T PRK06149 832 AE 833 (972)
T ss_pred Hh
Confidence 54
No 370
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=92.10 E-value=5.7 Score=39.46 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=53.0
Q ss_pred HHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcE
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDL 277 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Df 277 (311)
.+.|++++++.........|.+. .. ..|.+.| +++|.+ |+++|++++.|=++.-.|... ++.....+|+
T Consensus 184 ~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi 263 (425)
T PRK08088 184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL 263 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE
Confidence 34577777521111123444443 22 3566666 666755 689999999999987314322 2222345786
Q ss_pred EEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539 278 VLCTLDNNTHAQP-LKITCLLVRRKSFD 304 (311)
Q Consensus 278 l~~S~HK~l~G~P-~GiG~L~vr~~~~~ 304 (311)
.+| =| .+| | --+|+++.++++.+
T Consensus 264 ~s~--sK-~l~-~G~rig~v~~~~~~~~ 287 (425)
T PRK08088 264 TTF--AK-SIA-GGFPLAGVTGRAEVMD 287 (425)
T ss_pred EEE--ec-ccc-CCCcceeeEecHHHHh
Confidence 554 69 555 3 12799998766543
No 371
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=91.28 E-value=4.9 Score=41.01 Aligned_cols=73 Identities=12% Similarity=0.227 Sum_probs=44.8
Q ss_pred HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc-------cCCCCCC
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ-------LALALHR 274 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p-------ldl~~l~ 274 (311)
.+.+++++.... ....-|.+ +.+ ..|.+.| ++.+.+ |+++|+++++|=+|.-.|..- .++. ..
T Consensus 238 l~~l~~~l~~~~--~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~~ 314 (464)
T TIGR00699 238 LEEVEDLIKKWH--KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD-DP 314 (464)
T ss_pred HHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC-CC
Confidence 455677776421 12333333 333 4688888 778865 699999999999996214311 1222 24
Q ss_pred CcEEEEccccCc
Q 021539 275 PDLVLCTLDNNT 286 (311)
Q Consensus 275 ~Dfl~~S~HK~l 286 (311)
||++++ =|++
T Consensus 315 PDi~t~--gK~l 324 (464)
T TIGR00699 315 PDMVTF--SKKF 324 (464)
T ss_pred CCEEEe--hhhh
Confidence 999887 4834
No 372
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=91.10 E-value=0.43 Score=41.45 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=32.4
Q ss_pred HHHHHHHHHc----C----CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE
Q 021539 130 QARNRALKHC----G----LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL 174 (311)
Q Consensus 130 ~aR~~IA~~L----g----a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il 174 (311)
+.|+.||+++ | ++++ +|++|+|+|+|+.+++..+ ..+||.|+
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l-~dpGD~Vl 145 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCI-ADPGDAFL 145 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHH-cCCCCEEE
Confidence 5666666666 4 3444 5999999999999999987 36899876
No 373
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=90.37 E-value=0.72 Score=46.15 Aligned_cols=162 Identities=16% Similarity=0.182 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHH--HHHhc---------CCCCCCCE--EEEcc-CcChHHHHHHHHhCCc
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAML--MIGES---------YPFFKGNY--YLTII-SEESDYIKGFAAQKES 193 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealn--lv~~s---------~~~~~Gd~--Ils~~-eh~~~~~~~la~~~G~ 193 (311)
+-++|+..|++||+++++ |+.-.|.+-.++ ++..+ -||.+.+. ++++. ++. .=..+++..|+
T Consensus 71 ipe~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYD--RHFai~E~~Gi 146 (425)
T PF12897_consen 71 IPEARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYD--RHFAITEHFGI 146 (425)
T ss_dssp -HHHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--H--HHHHHHHHCT-
T ss_pred hHHHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCch--HHHHHHHhhCc
Confidence 458999999999998765 776666654432 22222 25654433 34332 321 11234677899
Q ss_pred EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-H--H--HCCcEEEecccccCccCc
Q 021539 194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-A--H--RNAWHVLLDATGLVFGED 266 (311)
Q Consensus 194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a--~--~~g~~vlvDAaQsv~G~~ 266 (311)
+.+.||.+. +| -|.+.+++++..+. .-+++-|++-- =+|+.+.=+.+.+ + + ..+..++-|=|=++ =+.
T Consensus 147 emi~VpM~~-dG-PDmD~Ve~LV~~D~--svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~v-HhL 221 (425)
T PF12897_consen 147 EMIPVPMTE-DG-PDMDMVEELVAEDP--SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAV-HHL 221 (425)
T ss_dssp EEEEEEEET-TE-E-HHHHHHHTHTST--TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT--BS
T ss_pred EEEecCCCC-CC-CCHHHHHHHHhcCC--ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceE-eec
Confidence 999999876 56 48999999986442 12578888733 4899999877754 3 2 35667777766554 332
Q ss_pred ----c----cCC-----CCCCC--cEEEEccccCcCCCCCceEEEEEe
Q 021539 267 ----Q----LAL-----ALHRP--DLVLCTLDNNTHAQPLKITCLLVR 299 (311)
Q Consensus 267 ----p----ldl-----~~l~~--Dfl~~S~HK~l~G~P~GiG~L~vr 299 (311)
+ +|+ ++-++ =|+.+|.-|=.|. =.|++++-..
T Consensus 222 ~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~-GaGva~~aaS 268 (425)
T PF12897_consen 222 YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP-GAGVAFFAAS 268 (425)
T ss_dssp SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T-TSS-EEEEE-
T ss_pred cccccchhhhHHHHHHHHcCCCCeEEEEecccccccC-CcceeeeecC
Confidence 1 111 01123 3778899993343 2367776544
No 374
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=90.15 E-value=10 Score=37.70 Aligned_cols=171 Identities=11% Similarity=0.068 Sum_probs=83.8
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCCCCCCCEEEEcc-CcC--hHHHHHHHH-----hCCc-----EE
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYPFFKGNYYLTII-SEE--SDYIKGFAA-----QKES-----KV 195 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~~~~Gd~Ils~~-eh~--~~~~~~la~-----~~G~-----~V 195 (311)
+.-+++++++... ....+.|+.++|||+..++. +..+.....|++.. .+| ......+.. +.+. .+
T Consensus 87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~ 165 (421)
T PRK06777 87 TLAERINALAPID-GPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSI 165 (421)
T ss_pred HHHHHHHHhCCCC-CCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence 3335566665432 11259999999998876544 11122234565433 344 111111111 0011 12
Q ss_pred EEEeCCCC-Cc---ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccc-hhc---HHHHHH-HHHCCcEEEecccccCcc
Q 021539 196 IAAPETWL-DL---RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGT-RYS---MHWISE-AHRNAWHVLLDATGLVFG 264 (311)
Q Consensus 196 ~~vp~~~~-~g---~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~-i~P---i~~I~~-a~~~g~~vlvDAaQsv~G 264 (311)
..+|.... .+ .-+.+.+++.++..........|.+ +.+ ..|. ..| +++|.+ |+++|+++++|=+|.-.|
T Consensus 166 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK06777 166 FHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA 245 (421)
T ss_pred EEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence 22222110 00 1124557777753111112344443 333 4665 356 555644 689999999999988324
Q ss_pred Ccc--cCCC--CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 265 EDQ--LALA--LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 265 ~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
... +-.. ...+|+++ .=|.+-|+ --+|+++.++++.+
T Consensus 246 r~g~~~~~~~~~~~pDiv~--~sK~l~~G-~pigav~~~~~i~~ 286 (421)
T PRK06777 246 RTGKLFAMEYYDVKPDLIT--MAKSLGGG-MPISAVVGRAEVMD 286 (421)
T ss_pred cCCchhhhhhcCCCCCEEe--eehhhcCC-CceEEEEEcHHHHh
Confidence 322 1112 23589775 46833321 12899998876544
No 375
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=89.94 E-value=5.4 Score=39.94 Aligned_cols=88 Identities=15% Similarity=0.075 Sum_probs=51.6
Q ss_pred CHHHHHhhhhccCCCCCceEEEEecccccc---hhcHHHHHH-HHHCCcEEEecccccCccCcccC--CC---CCCCcEE
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSYPVVVNGT---RYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--LA---LHRPDLV 278 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~~~~~tG~---i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l~---~l~~Dfl 278 (311)
++++|+++++... .....|.+-. +.|. .-+++++.+ |+++|+++++|-+|. |-..-- .. ...||++
T Consensus 173 d~~~l~~~l~~~~--~~~aavi~Ep-v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t--G~~~~~~g~~~~~gv~PDi~ 247 (431)
T PRK06209 173 DIASLEALFEDHP--GRIACVILEP-ATADEPQDGFLHEVRRLCHENGALFILDEMIT--GFRWHMRGAQKLYGIVPDLS 247 (431)
T ss_pred CHHHHHHHHHhCC--CCEEEEEEcc-ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--cCCcCcchhhHHhCCCccee
Confidence 5688888886421 1234444322 2333 233677755 689999999999994 432211 11 2368986
Q ss_pred EEccccCcCCC-CCceEEEEEeCCCCc
Q 021539 279 LCTLDNNTHAQ-PLKITCLLVRRKSFD 304 (311)
Q Consensus 279 ~~S~HK~l~G~-P~GiG~L~vr~~~~~ 304 (311)
++ =|++-|+ | +|++..+++..+
T Consensus 248 t~--gK~lggG~p--~~av~~~~~i~~ 270 (431)
T PRK06209 248 CF--GKALGNGFA--VSALAGKREYME 270 (431)
T ss_pred ee--hhhhcCCcc--cEEEEEHHHHHh
Confidence 66 5844432 4 677777765543
No 376
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=89.64 E-value=15 Score=37.36 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=53.6
Q ss_pred HHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539 209 GSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D 276 (311)
.+.+++.+.... +......|.+ +.+ .-|.+.| ++++.+ |+++|+++++|=+|.-.|..- .+--...||
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PD 294 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD 294 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCC
Confidence 456777775311 0012333333 333 4677665 344544 689999999999998324322 111224699
Q ss_pred EEEEccccCcCCC-CCceEEEEEeCCC
Q 021539 277 LVLCTLDNNTHAQ-PLKITCLLVRRKS 302 (311)
Q Consensus 277 fl~~S~HK~l~G~-P~GiG~L~vr~~~ 302 (311)
+++++ |++-|+ | +|+++.+++.
T Consensus 295 iv~~g--KglggG~P--lsAv~~~~~~ 317 (464)
T PRK06938 295 VVVLS--KAIGGSLP--LAVVVYREWL 317 (464)
T ss_pred EEEee--ccccCCCc--eEEEeehhHh
Confidence 99995 756543 4 8889988764
No 377
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=88.81 E-value=17 Score=36.58 Aligned_cols=71 Identities=21% Similarity=0.317 Sum_probs=43.7
Q ss_pred EEEEecc-cccchh-cHH---HHHH-HHHCCcEEEecccccCccCcc--cC--CCCCCCcEEEEccccCcCCC-CCceEE
Q 021539 227 LFSYPVV-VNGTRY-SMH---WISE-AHRNAWHVLLDATGLVFGEDQ--LA--LALHRPDLVLCTLDNNTHAQ-PLKITC 295 (311)
Q Consensus 227 LVs~~~~-~tG~i~-Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~p--ld--l~~l~~Dfl~~S~HK~l~G~-P~GiG~ 295 (311)
++.-+.+ ..|.+. |-+ +|.+ |+++|+++++|=+|.-.|..- +- --...||.+++ =|++-|+ | +|+
T Consensus 210 vi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P--iga 285 (442)
T TIGR00709 210 VILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP--LAV 285 (442)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc--cEE
Confidence 3333433 456664 433 4544 689999999999988225422 11 11246999996 4855432 4 888
Q ss_pred EEEeCC
Q 021539 296 LLVRRK 301 (311)
Q Consensus 296 L~vr~~ 301 (311)
++.+++
T Consensus 286 v~~~~~ 291 (442)
T TIGR00709 286 LLIAPE 291 (442)
T ss_pred EEEchH
Confidence 998876
No 378
>PRK06148 hypothetical protein; Provisional
Probab=88.37 E-value=8.9 Score=42.89 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=46.4
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc-----cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ-----LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRK 301 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p-----ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~ 301 (311)
+-|.+.| ++.+.+ |+++|+++++|=+|. + |..- .......||++++ =|++-|+ | +|+++.+++
T Consensus 796 ~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf-GRtG~~~~a~e~~gv~PDivt~--gK~lggG~P--lgav~~~~e 870 (1013)
T PRK06148 796 VAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF-GRVGSHWWAFETQGVVPDIVTM--GKPIGNGHP--MGAVVTTRE 870 (1013)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC-CCCCCcchhhhhcCCCcceeee--cccccCCcc--eEEEEEcHH
Confidence 4688877 677755 699999999999996 4 5332 1112346999888 4856543 4 899999877
Q ss_pred CCc
Q 021539 302 SFD 304 (311)
Q Consensus 302 ~~~ 304 (311)
..+
T Consensus 871 i~~ 873 (1013)
T PRK06148 871 IAD 873 (1013)
T ss_pred HHh
Confidence 644
No 379
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=87.86 E-value=3.4 Score=41.30 Aligned_cols=140 Identities=10% Similarity=0.050 Sum_probs=85.8
Q ss_pred EeCCHHHHHHHHHhcCCCC-CCCEE-EEc--cCcChHHHHHHHHhCCcEEEEEe-CCCCCcccCHHHHHhhhhccCCCCC
Q 021539 150 FVPNYKEAMLMIGESYPFF-KGNYY-LTI--ISEESDYIKGFAAQKESKVIAAP-ETWLDLRIKGSQLSQNFRRKCKYTP 224 (311)
Q Consensus 150 FTsnaTealnlv~~s~~~~-~Gd~I-ls~--~eh~~~~~~~la~~~G~~V~~vp-~~~~~g~id~~~L~~~l~~~~~~~~ 224 (311)
=|.|+|.|+.+.++-+... +...| ++. .+.|.+ +.+..|.+|..=| .+.++..+|.+.+...|+.-.+
T Consensus 99 Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~----If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~--- 171 (396)
T COG1448 99 QTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA----IFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPE--- 171 (396)
T ss_pred ecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH----HHHhcCCceeeeeccccccccccHHHHHHHHHhCCC---
Confidence 4679999999988765321 22333 433 232322 2344699997766 4444455888888777775332
Q ss_pred ceEEE---EecccccchhcHH-H--HHH-HHHCCcEEEecc-cccCccCcccCCCC--------CCC-cEEEEccccC--
Q 021539 225 KGLFS---YPVVVNGTRYSMH-W--ISE-AHRNAWHVLLDA-TGLVFGEDQLALAL--------HRP-DLVLCTLDNN-- 285 (311)
Q Consensus 225 t~LVs---~~~~~tG~i~Pi~-~--I~~-a~~~g~~vlvDA-aQsv~G~~pldl~~--------l~~-Dfl~~S~HK~-- 285 (311)
..+|. |.|+=||.-..-+ | |.+ .+++|++.++|- -|.+ |.. ++-+. .++ =|++.|+-|.
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF-~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGF-ADG-LEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhh-ccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 22333 3455599887764 3 444 489999999995 4777 654 44221 223 6788889994
Q ss_pred cCCCCCceEEEEEeC
Q 021539 286 THAQPLKITCLLVRR 300 (311)
Q Consensus 286 l~G~P~GiG~L~vr~ 300 (311)
+|| ..+|++.+--
T Consensus 250 LYg--ERVGa~~vva 262 (396)
T COG1448 250 LYG--ERVGALSVVA 262 (396)
T ss_pred hhh--hccceeEEEe
Confidence 444 3588887753
No 380
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=87.40 E-value=21 Score=36.12 Aligned_cols=64 Identities=16% Similarity=0.322 Sum_probs=41.4
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCC-CCCceEEEEEeCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRK 301 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~ 301 (311)
..|.+.| ++.+.+ |+++|+++++|=+|.-.|..- .......||+++++ |++-| +| +|++..+++
T Consensus 237 ~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~P--i~av~~~~~ 310 (459)
T PRK06931 237 EGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLP--LAVLGIKKE 310 (459)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCCcc--eeeeeeHHH
Confidence 4677665 445544 689999999999998224222 11123469999984 75554 35 677777765
No 381
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=87.38 E-value=3.5 Score=44.03 Aligned_cols=58 Identities=21% Similarity=0.188 Sum_probs=39.5
Q ss_pred cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceE
Q 021539 234 VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKIT 294 (311)
Q Consensus 234 ~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG 294 (311)
--|.+.|.+++.+ +|.+|.++++ |+-.+.-.+-=.-.++++|..+.|.+. ||.|-|-|
T Consensus 258 t~G~i~d~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSsQR--FGVPlGYG 316 (1001)
T KOG2040|consen 258 TEGSVLDFDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSSQR--FGVPLGYG 316 (1001)
T ss_pred CCCcccCHHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccccc--cCccccCC
Confidence 3799999999865 7999988554 443330111112345789999999999 66677654
No 382
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=83.53 E-value=15 Score=37.10 Aligned_cols=171 Identities=16% Similarity=0.099 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCC--C-C--C-CEEEE-ccCcChHHHHHH--HHh--CCc--
Q 021539 128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPF--F-K--G-NYYLT-IISEESDYIKGF--AAQ--KES-- 193 (311)
Q Consensus 128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~--~-~--G-d~Ils-~~eh~~~~~~~l--a~~--~G~-- 193 (311)
.-++-+.+.+.++-..-+ .|-|..|+|||+..++.. ..+ . . + ..++. ...+|...+-.+ +.. ++.
T Consensus 100 av~l~~~l~~~~~~~~~~-rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~ 178 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAE-RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPF 178 (433)
T ss_pred HHHHHHHHHhcccCCCcc-EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCC
Confidence 345666677777433222 499999999999877652 211 1 1 1 12442 233442222111 111 111
Q ss_pred -----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHH-----HH-HHHHHCCcEEEeccccc
Q 021539 194 -----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMH-----WI-SEAHRNAWHVLLDATGL 261 (311)
Q Consensus 194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~-----~I-~~a~~~g~~vlvDAaQs 261 (311)
.|...+. -|..+|+++++.+..+ ..-|.+ +.+=.|-+.|.+ .+ .+|+++|++|+.|=+|.
T Consensus 179 ~p~~p~v~~~~y------nd~t~l~k~~~~h~~~--IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t 250 (433)
T KOG1401|consen 179 DPIAPDVVTAEY------NDSTALEKLFESHKGE--IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT 250 (433)
T ss_pred CCCCCceeeccc------CCHHHHHHHHHhCCCc--eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh
Confidence 1111111 1467899999875311 122222 333134455542 23 34688999999999987
Q ss_pred CccCcccCCC----CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCCC
Q 021539 262 VFGEDQLALA----LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTS 310 (311)
Q Consensus 262 v~G~~pldl~----~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~~ 310 (311)
-.|..-.-.. ...||..++. |.+-|+ -=+|+..+|+++.+..+|..
T Consensus 251 G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gG-lPigA~~v~~kV~~~i~~~~ 300 (433)
T KOG1401|consen 251 GLGRLGYGWAQEYFGVTPDITTVA--KPLGGG-LPIGATGVRDKVAEMISPGD 300 (433)
T ss_pred CccccchHHHHHHhCcCCcceeeh--hhccCC-ceeEEEeehHHHHhhcCCCC
Confidence 2122211111 1468988764 733333 23899999999999877754
No 383
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=81.77 E-value=17 Score=36.45 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=49.0
Q ss_pred HHHHHhhhhccCCCCCceEEEE-ec-c-cccch----hcHHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTR----YSMHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD 276 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i----~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D 276 (311)
.+++++.+.... .....|.+ +. + .-|.+ -+++.+.+ |+++|+++++|=+|.-.|..- .+.....+|
T Consensus 194 ~~~l~~~l~~~~--~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD 271 (427)
T TIGR00508 194 ITPLAKLMELHS--DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD 271 (427)
T ss_pred HHHHHHHHHhcC--CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC
Confidence 456667775321 12344444 32 3 23443 33455544 689999999999994113321 112235799
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCC
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++++ =|.+.|+=.-+++++.++++
T Consensus 272 i~~~--gK~l~gG~~p~~a~~~~~~~ 295 (427)
T TIGR00508 272 ILCV--GKALTGGYMTLSATVTTDKV 295 (427)
T ss_pred EEEe--chhhhcCcccceEEEEcHHH
Confidence 8885 68554430114667776554
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=74.53 E-value=33 Score=34.52 Aligned_cols=183 Identities=10% Similarity=0.026 Sum_probs=99.0
Q ss_pred HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC----CCCCCEEEEccCcChHHH
Q 021539 109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP----FFKGNYYLTIISEESDYI 184 (311)
Q Consensus 109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~----~~~Gd~Ils~~eh~~~~~ 184 (311)
+..|+..--+|.|++.-.. .+..+-+.+|. +| ++=|.-+..|=|++..-+. ..+|+..+.....|-+..
T Consensus 65 waamm~GDEAYagsrs~~~---L~~avkdifGf---q~-~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT 137 (471)
T COG3033 65 WAAMMRGDEAYAGSRSYYA---LADAVKDIFGF---QY-TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT 137 (471)
T ss_pred HHHHhccchhhcccccHHH---HHHHHHHhcCc---ee-eeeccCCccHHHHHHHHHhhhccccCCccccccccceecch
Confidence 5666766667777666544 34445666775 22 6677766666555443221 124433222222111111
Q ss_pred HHHHHhCCcEEEEEeCCC--------C-CcccCHHHHHhhhhccCCCCCceEEEEec--cc-ccchhcHH---HHHH-HH
Q 021539 185 KGFAAQKESKVIAAPETW--------L-DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VV-NGTRYSMH---WISE-AH 248 (311)
Q Consensus 185 ~~la~~~G~~V~~vp~~~--------~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~-tG~i~Pi~---~I~~-a~ 248 (311)
+.-.+..|+...-++++. + .|.+|.+.|++++++- +..+...++++. ++ -|+-..++ ++.+ ++
T Consensus 138 r~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidev-G~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ 216 (471)
T COG3033 138 RGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEV-GADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAK 216 (471)
T ss_pred hHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHh-CcccCcEEEEEEeccccCCCcchHHhHHHHHHHHH
Confidence 222233455444443321 0 3678999999999862 222344555443 33 45544444 4544 58
Q ss_pred HCCcEEEecccccCccC-cccCCCC----------------CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 249 RNAWHVLLDATGLVFGE-DQLALAL----------------HRPDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 249 ~~g~~vlvDAaQsv~G~-~pldl~~----------------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
++++.|+.|++-.+ -. .-|...+ .-+|-++.|+-|=.+- +- -|+|..+++.
T Consensus 217 ky~ipvv~Da~Rfa-ENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv-nm-GGfl~~~D~~ 284 (471)
T COG3033 217 KYDIPVVMDAARFA-ENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV-NM-GGFLCFKDDS 284 (471)
T ss_pred HcCCcEEeehhhhh-hhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee-cc-ccEEEecCcc
Confidence 99999999999776 21 1111111 1389999999994333 32 3666677664
No 385
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=72.45 E-value=11 Score=37.50 Aligned_cols=92 Identities=12% Similarity=0.173 Sum_probs=59.4
Q ss_pred CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCc----ccCCCCCCCc
Q 021539 208 KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGED----QLALALHRPD 276 (311)
Q Consensus 208 d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~----pldl~~l~~D 276 (311)
+.+.|+.+|+.+ ..+-|.+ +.+ +-|++.| ++.+.+ |.+++++++.|=+|.-+|.. -.|-+...||
T Consensus 195 d~eale~~l~~~----~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PD 270 (427)
T KOG1402|consen 195 DAEALEVALKSP----NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPD 270 (427)
T ss_pred CHHHHHHHhcCC----CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCC
Confidence 467888888763 1233333 344 7899988 567765 68999999999999853322 3566778899
Q ss_pred EEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539 277 LVLCTLDNNTHAQPLKITCLLVRRKSFDT 305 (311)
Q Consensus 277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~ 305 (311)
.+.+. |.+-|+--=+.+.+..++++-.
T Consensus 271 ivilg--KalSGG~~Pvsavl~~~~im~~ 297 (427)
T KOG1402|consen 271 IVILG--KALSGGVYPVSAVLADDDIMLN 297 (427)
T ss_pred eEEEe--ccccCCeeeeEEEEecHHHHhc
Confidence 99864 6444431114555555555433
No 386
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=69.82 E-value=1.3e+02 Score=30.57 Aligned_cols=141 Identities=14% Similarity=0.180 Sum_probs=79.2
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH-HHHHHhCCcEEEEEeCCCCCcccC
Q 021539 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI-KGFAAQKESKVIAAPETWLDLRIK 208 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~-~~la~~~G~~V~~vp~~~~~g~id 208 (311)
+.-.+||+|+|+. + .|++..|-+. ++-++-+|. ++||.++.... -+-.+ +.+ +..-.++.+..-+ |
T Consensus 143 dlE~~iakF~G~E-~--aivYs~gF~t-i~S~ipafs-KrGDIi~~de~-~nfaIq~Gl-qlSRS~i~~Fkhn------d 209 (467)
T KOG1358|consen 143 DLEKRIAKFMGTE-D--AIVYSYGFST-IESAIPAFS-KRGDIIFVDEA-VNFAIQKGL-QLSRSTISYFKHN------D 209 (467)
T ss_pred ccHHHHHHhhCCc-c--eeeeccccch-hhhcchhhh-ccCcEEEEehh-hhHHHHHHH-hhhhheeEEecCC------C
Confidence 5667899999995 2 3887766553 344444553 46777653222 11112 111 1112345554433 3
Q ss_pred HHHHHhhhhccC-------CCCCceEE-EEecc--cccchhcHHHHHHH-HHCCcEEEecccccCccCcc---------c
Q 021539 209 GSQLSQNFRRKC-------KYTPKGLF-SYPVV--VNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQ---------L 268 (311)
Q Consensus 209 ~~~L~~~l~~~~-------~~~~t~LV-s~~~~--~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~p---------l 268 (311)
.++|+..+.+.+ +...++-+ .+-.. -+|.+.|+.+|-+. .++...+++|=+=+. |... .
T Consensus 210 m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~Sf-G~lg~~GrGvteH~ 288 (467)
T KOG1358|consen 210 MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSF-GVLGKTGRGVTEHF 288 (467)
T ss_pred HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccccc-ccccccCccccccC
Confidence 445554443221 11112333 32333 39999999999665 678999999987766 5322 2
Q ss_pred CCCCCCCcEEEEcccc
Q 021539 269 ALALHRPDLVLCTLDN 284 (311)
Q Consensus 269 dl~~l~~Dfl~~S~HK 284 (311)
.+..-.+|.+++|.--
T Consensus 289 ~v~~~~iDiv~~sm~~ 304 (467)
T KOG1358|consen 289 GVPITDIDIVTASMET 304 (467)
T ss_pred CCCccceeeeeecccc
Confidence 2333468999999877
No 387
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=61.95 E-value=1.3e+02 Score=31.00 Aligned_cols=91 Identities=16% Similarity=0.296 Sum_probs=51.8
Q ss_pred HHHHHhhhhccCCCCCceEEEE---ecc-c-ccchhc----HHHHHH-HHHCCcEEEecccccCccCcccCC----CCCC
Q 021539 209 GSQLSQNFRRKCKYTPKGLFSY---PVV-V-NGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLAL----ALHR 274 (311)
Q Consensus 209 ~~~L~~~l~~~~~~~~t~LVs~---~~~-~-tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl----~~l~ 274 (311)
.++|++++...- +-.+.++ +.+ . .|.+.| +++|.+ |+++|+++++|=+-.-.|..---+ ....
T Consensus 200 a~~le~~i~~~g---~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~ 276 (449)
T COG0161 200 ADELEALILEHG---PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIV 276 (449)
T ss_pred HHHHHHHHHhcC---cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCC
Confidence 456777776531 1134443 333 3 788877 456655 689999999997644213221111 1146
Q ss_pred CcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539 275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~ 304 (311)
||+++++ |++=|+=.=+|+.++++++.+
T Consensus 277 PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~ 304 (449)
T COG0161 277 PDILCLA--KGLTGGYLPLSAVLTSDRIYE 304 (449)
T ss_pred CCeeeec--ccccccchhhHhHhhhHHHHH
Confidence 9999987 754433112666666665543
No 388
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=58.23 E-value=74 Score=25.46 Aligned_cols=90 Identities=10% Similarity=0.024 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC---CcEEEec
Q 021539 182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN---AWHVLLD 257 (311)
Q Consensus 182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~---g~~vlvD 257 (311)
..+..+.+..|++|..+.. .+..+++.+.+.+. +..+|+++...+.....+.++ .++++. ++.+++=
T Consensus 17 ~~~~~~l~~~G~~V~~lg~-----~~~~~~l~~~~~~~----~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vG 87 (119)
T cd02067 17 NIVARALRDAGFEVIDLGV-----DVPPEEIVEAAKEE----DADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVG 87 (119)
T ss_pred HHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHHc----CCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 3455667778999977643 24566776666543 245777765434444555555 445553 5777777
Q ss_pred ccccCccCcccCCCCCCCcEEEEcc
Q 021539 258 ATGLVFGEDQLALALHRPDLVLCTL 282 (311)
Q Consensus 258 AaQsv~G~~pldl~~l~~Dfl~~S~ 282 (311)
|.+.. . .+--+.+.++|.++-++
T Consensus 88 G~~~~-~-~~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 88 GAIVT-R-DFKFLKEIGVDAYFGPA 110 (119)
T ss_pred CCCCC-h-hHHHHHHcCCeEEECCH
Confidence 76554 2 11124557888876543
No 389
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=55.18 E-value=83 Score=26.85 Aligned_cols=87 Identities=5% Similarity=-0.014 Sum_probs=51.3
Q ss_pred hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHH-HHHHCC---cEEEe
Q 021539 181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWIS-EAHRNA---WHVLL 256 (311)
Q Consensus 181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~-~a~~~g---~~vlv 256 (311)
.+.+..+.+..|++|..+..+ +..+++-+...+. ...+|+++...+.+...+.++. ++++.| ..+++
T Consensus 18 k~iv~~~l~~~GfeVi~LG~~-----v~~e~~v~aa~~~----~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~viv 88 (134)
T TIGR01501 18 NKILDHAFTNAGFNVVNLGVL-----SPQEEFIKAAIET----KADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYV 88 (134)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEe
Confidence 455666677889999987664 4566665555442 1458887765455555566664 466654 55666
Q ss_pred cccccCccCcccC-----CCCCCCcE
Q 021539 257 DATGLVFGEDQLA-----LALHRPDL 277 (311)
Q Consensus 257 DAaQsv~G~~pld-----l~~l~~Df 277 (311)
=++-.+ +..+.. +.++++|-
T Consensus 89 GG~~vi-~~~d~~~~~~~l~~~Gv~~ 113 (134)
T TIGR01501 89 GGNLVV-GKQDFPDVEKRFKEMGFDR 113 (134)
T ss_pred cCCcCc-ChhhhHHHHHHHHHcCCCE
Confidence 665444 433332 44455554
No 390
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=50.22 E-value=1.7e+02 Score=26.55 Aligned_cols=92 Identities=8% Similarity=0.072 Sum_probs=55.2
Q ss_pred hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC--CcEEEec
Q 021539 181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN--AWHVLLD 257 (311)
Q Consensus 181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~--g~~vlvD 257 (311)
.+.+..+.+..|++|..+..+ +..+++.+.+.+. +..+|+++...+-+...+.++ ..+++. ++.+++=
T Consensus 105 ~~iv~~~l~~~G~~Vi~LG~~-----vp~e~~v~~~~~~----~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vG 175 (213)
T cd02069 105 KNLVGVILSNNGYEVIDLGVM-----VPIEKILEAAKEH----KADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIG 175 (213)
T ss_pred HHHHHHHHHhCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEE
Confidence 445566677889999987654 4577777777653 246888876655556666654 455554 5666665
Q ss_pred ccccCccCccc-C---CCCCCCcEEEEccc
Q 021539 258 ATGLVFGEDQL-A---LALHRPDLVLCTLD 283 (311)
Q Consensus 258 AaQsv~G~~pl-d---l~~l~~Dfl~~S~H 283 (311)
|+..- - ..- + -+..++|+++-++.
T Consensus 176 G~~~~-~-~~~~~~~~~~~~gad~y~~da~ 203 (213)
T cd02069 176 GAATS-R-KHTAVKIAPEYDGPVVYVKDAS 203 (213)
T ss_pred ChhcC-H-HHHhhhhccccCCCceEecCHH
Confidence 53211 0 000 0 12368999886654
No 391
>cd00472 Ribosomal_L24e_L24 Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor binding site. L24e/L24 appears to play a role in the kinetics of peptide synthesis, and may be involved in interactions between the large and small subunits, either directly or through other factors. In mouse, a deletion mutation in L24 has been identified as the cause for the belly spot and tail (Bst) mutation that results in disrupted pigmentation, somitogenesis and retinal cell fate determination. L24 may be an important protein in eukaryotic reproduction: in shrimp, L24 expression is elevated in the ovary, suggesting a role in oogenesis, and in Arabidopsis, L24 has been proposed to have a specific function in gynoecium development. No protein with sequence or structural homology to L24e/L24 has been identifi
Probab=49.91 E-value=8.9 Score=27.84 Aligned_cols=23 Identities=13% Similarity=0.010 Sum_probs=18.3
Q ss_pred cEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 276 DLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
+--+||++| ++ | |.|.+||+++-
T Consensus 4 ~~C~f~g~~-I~--P-G~G~~~Vr~Dg 26 (54)
T cd00472 4 EKCSFCGYK-IY--P-GHGKMYVRNDG 26 (54)
T ss_pred EEecCcCCe-ec--C-CCccEEEecCC
Confidence 455789999 75 4 89999999863
No 392
>PRK08297 L-lysine aminotransferase; Provisional
Probab=48.65 E-value=42 Score=33.78 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=41.5
Q ss_pred HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCccc----CCCCCCCcE
Q 021539 210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQL----ALALHRPDL 277 (311)
Q Consensus 210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~pl----dl~~l~~Df 277 (311)
+++++.+.... .....|.+ +.+ ..|.+.| +++|.+ |+++|+++++|=+|. + |..-- +.-...||+
T Consensus 213 ~~~~~~i~~~~--~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDi 289 (443)
T PRK08297 213 AQARAAFERHP--HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGV-GLTGTAWAYQQLGVRPDI 289 (443)
T ss_pred HHHHHHHHhCC--CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcc-CccchHHHHHhcCCCCCE
Confidence 44556665321 12444444 333 4576633 445544 689999999999996 5 65421 111246999
Q ss_pred EEEcccc
Q 021539 278 VLCTLDN 284 (311)
Q Consensus 278 l~~S~HK 284 (311)
+++ =|
T Consensus 290 v~~--gK 294 (443)
T PRK08297 290 VAF--GK 294 (443)
T ss_pred EEe--cc
Confidence 986 57
No 393
>COG2075 RPL24A Ribosomal protein L24E [Translation, ribosomal structure and biogenesis]
Probab=47.30 E-value=14 Score=27.88 Aligned_cols=21 Identities=10% Similarity=-0.024 Sum_probs=16.3
Q ss_pred EEEccccCcCCCCCceEEEEEeCCC
Q 021539 278 VLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 278 l~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
-.|++++ + ++|+|.+||+++-
T Consensus 6 CsFcG~~-I---~PGtG~m~Vr~Dg 26 (66)
T COG2075 6 CSFCGKK-I---EPGTGIMYVRNDG 26 (66)
T ss_pred ecCcCCc-c---CCCceEEEEecCC
Confidence 4577888 6 4499999999864
No 394
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=47.22 E-value=22 Score=38.98 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=45.9
Q ss_pred cccchhc----HHHHHH-HHHCCcEEEecccccCccCcccC----CCCCCCcEEEEccccCcCCC--CCceEEEEEeCCC
Q 021539 234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLA----LALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKS 302 (311)
Q Consensus 234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pld----l~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~ 302 (311)
.-|.+.| ++.+.+ |+++|+++++|=+|.-.|..--- .-...||+++++ |++-|+ | +|++++++++
T Consensus 597 aGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~P--laa~l~~~~I 672 (817)
T PLN02974 597 AGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVP--LAATLATEEV 672 (817)
T ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCc--cEEEEEcHHH
Confidence 3577765 345554 68999999999999832433311 122469999987 855554 5 7889998876
Q ss_pred Ccc
Q 021539 303 FDT 305 (311)
Q Consensus 303 ~~~ 305 (311)
++.
T Consensus 673 ~~~ 675 (817)
T PLN02974 673 FEA 675 (817)
T ss_pred HHh
Confidence 553
No 395
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=43.37 E-value=1.7e+02 Score=24.80 Aligned_cols=88 Identities=6% Similarity=-0.002 Sum_probs=52.8
Q ss_pred hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC---CcEEEe
Q 021539 181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN---AWHVLL 256 (311)
Q Consensus 181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~---g~~vlv 256 (311)
.+.+..+.+..|++|..+.++ +..+++-+...+. ...+|+++...+.+...+.++ .++++. ++.+++
T Consensus 16 kniv~~~L~~~GfeVidLG~~-----v~~e~~v~aa~~~----~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~viv 86 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVL-----SPQEEFIDAAIET----DADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYV 86 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEE
Confidence 455666667789999887664 4566665544432 145888776555665556666 445665 456777
Q ss_pred cccccCccCcccC-----CCCCCCcEE
Q 021539 257 DATGLVFGEDQLA-----LALHRPDLV 278 (311)
Q Consensus 257 DAaQsv~G~~pld-----l~~l~~Dfl 278 (311)
=++-.+ +....+ +.++++|-+
T Consensus 87 GG~~~i-~~~d~~~~~~~L~~~Gv~~v 112 (128)
T cd02072 87 GGNLVV-GKQDFEDVEKRFKEMGFDRV 112 (128)
T ss_pred ECCCCC-ChhhhHHHHHHHHHcCCCEE
Confidence 766544 333321 455666654
No 396
>PF01246 Ribosomal_L24e: Ribosomal protein L24e; InterPro: IPR000988 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic and archaeabacterial ribosomal proteins can be grouped on the basis of sequence similarities. One of these families [] consists of mammalian ribosomal protein L24; yeast ribosomal protein L30A/B (Rp29) (YL21); Kluyveromyces lactis ribosomal protein L30; Arabidopsis thaliana ribosomal protein L24 homolog; Haloarcula marismortui ribosomal protein HL21/HL22; and Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ1201. These proteins have 60 to 160 amino-acid residues. This entry represents proteins related to the L24e ribosomal proteins.; PDB: 2ZKR_u 1VQ9_U 1VQL_U 1KD1_V 1VQP_U 3CCM_U 3CD6_U 3CCL_U 3CCR_U 1Q86_V ....
Probab=40.92 E-value=10 Score=29.01 Aligned_cols=24 Identities=13% Similarity=0.039 Sum_probs=15.5
Q ss_pred CcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539 275 PDLVLCTLDNNTHAQPLKITCLLVRRKS 302 (311)
Q Consensus 275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~ 302 (311)
.+--.||+++ ++ | |.|.+||+++-
T Consensus 3 ~~~C~Fsg~~-I~--P-G~G~~~Vr~DG 26 (71)
T PF01246_consen 3 TEKCSFSGYK-IY--P-GHGKMYVRNDG 26 (71)
T ss_dssp SEE-TTT-SE-E---S-SSSEEEE-TTS
T ss_pred eEEecccCCc-cC--C-CCCeEEEecCC
Confidence 3455689999 75 4 99999999763
No 397
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=40.89 E-value=1.8e+02 Score=22.90 Aligned_cols=88 Identities=10% Similarity=0.126 Sum_probs=54.0
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHC--CcEEEecc
Q 021539 182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRN--AWHVLLDA 258 (311)
Q Consensus 182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~--g~~vlvDA 258 (311)
..+..+.++.|++|..+..+ ++.+++.+.+.+. +..+|+++...+.......++.+ +|+. ++.+++=|
T Consensus 18 ~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~----~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG 88 (121)
T PF02310_consen 18 LYLAAYLRKAGHEVDILDAN-----VPPEELVEALRAE----RPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGG 88 (121)
T ss_dssp HHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHT----TCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcC----CCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 34455567789999988654 3457777766653 24678877544666666666644 5554 88999988
Q ss_pred cccCccCcccC-CCC-CCCcEEEE
Q 021539 259 TGLVFGEDQLA-LAL-HRPDLVLC 280 (311)
Q Consensus 259 aQsv~G~~pld-l~~-l~~Dfl~~ 280 (311)
.+.- . .|=. ++. .++|++++
T Consensus 89 ~~~t-~-~~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 89 PHAT-A-DPEEILREYPGIDYVVR 110 (121)
T ss_dssp SSSG-H-HHHHHHHHHHTSEEEEE
T ss_pred Cchh-c-ChHHHhccCcCcceecC
Confidence 7743 1 1211 222 46787765
No 398
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.65 E-value=2.2e+02 Score=24.01 Aligned_cols=72 Identities=4% Similarity=-0.041 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC---CcEEEec
Q 021539 182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN---AWHVLLD 257 (311)
Q Consensus 182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~---g~~vlvD 257 (311)
+.+..+.+..|++|+++-.+ +..+++.+...+. ...+|+++...+.....+.++ .++++. ++.+++=
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~-----vp~e~i~~~a~~~----~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vG 91 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVM-----TSQEEFIDAAIET----DADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVG 91 (137)
T ss_pred HHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 34455667889999987654 4567776666543 246777775534444444444 445554 5667766
Q ss_pred ccccC
Q 021539 258 ATGLV 262 (311)
Q Consensus 258 AaQsv 262 (311)
++-.+
T Consensus 92 G~~~~ 96 (137)
T PRK02261 92 GNLVV 96 (137)
T ss_pred CCCCC
Confidence 65433
No 399
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=39.78 E-value=1.2e+02 Score=30.73 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=41.7
Q ss_pred cccchhcH----HHHHH-HHHCCcEEEecccccCccCcc--cCCCCC--CCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539 234 VNGTRYSM----HWISE-AHRNAWHVLLDATGLVFGEDQ--LALALH--RPDLVLCTLDNNTHAQPLKITCLLVRRKSF 303 (311)
Q Consensus 234 ~tG~i~Pi----~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~l--~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~ 303 (311)
+.|++++- +...+ ++++|.+++.|=+|+-.|..- .-++.+ -||.++. -|++.++ .=+|+.+..++..
T Consensus 224 vgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTm--AKgiGnG-~Pl~AVvtt~EIa 299 (442)
T KOG1404|consen 224 VGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTM--AKGIGNG-FPLGAVVTTPEIA 299 (442)
T ss_pred CCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHH--HhhccCC-CcceeeecCHHHH
Confidence 46888774 45544 589999999999998545443 112222 3676654 4744432 3378888776543
No 400
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=39.70 E-value=3.5e+02 Score=26.38 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=71.3
Q ss_pred CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEE-EccCcChHHHHHH-HHhCCcEEEEEeCCCCCcccCHHHHHhhh
Q 021539 140 GLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYL-TIISEESDYIKGF-AAQKESKVIAAPETWLDLRIKGSQLSQNF 216 (311)
Q Consensus 140 ga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Il-s~~eh~~~~~~~l-a~~~G~~V~~vp~~~~~g~id~~~L~~~l 216 (311)
+..+|. |..-=|+-|.+..+++..- -+| +.|+ ++-... +..+ |.-.+++|+.+|.+. +-.++.+.+.+.+
T Consensus 83 pLt~dn--ic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtys---MY~v~A~iNd~eVvkvpl~p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 83 PLTSDN--ICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYS---MYVVDAAINDAEVVKVPLNP-DFSLNVDAIAEVL 155 (375)
T ss_pred CCCccc--eEEecCcHHHHHHHHhhee-cCCccceeecCCcce---eEEEEeecCCceEEEecCCC-CccccHHHHHHHH
Confidence 455444 8888899999999988652 355 4553 222211 1000 223588999999885 7778888888888
Q ss_pred hccCCCCCceEEEEec-ccccchhcHHHHHHHHH--CCcEEEeccc
Q 021539 217 RRKCKYTPKGLFSYPV-VVNGTRYSMHWISEAHR--NAWHVLLDAT 259 (311)
Q Consensus 217 ~~~~~~~~t~LVs~~~-~~tG~i~Pi~~I~~a~~--~g~~vlvDAa 259 (311)
..+.+ .+.+|.++- +-+|.+.-.+.|.++-+ .+.+|+||-|
T Consensus 156 ~~ds~--iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEA 199 (375)
T KOG0633|consen 156 ELDSK--IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEA 199 (375)
T ss_pred hcccc--ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeee
Confidence 75421 123444443 36999998888877533 4788888875
No 401
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.82 E-value=2.8e+02 Score=24.60 Aligned_cols=89 Identities=7% Similarity=0.055 Sum_probs=55.2
Q ss_pred hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC----CcEEE
Q 021539 181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN----AWHVL 255 (311)
Q Consensus 181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~----g~~vl 255 (311)
.+.+..+.+..|++|..+..+ +..+++.+.+.+. +..+|+++...+.....+.++ ..+++. ++.++
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~-----~p~~~l~~~~~~~----~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~ 169 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRD-----VPPEEFVEAVKEH----KPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVM 169 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEE
Confidence 345566678889999876543 4567777776653 246888876545555666665 445553 56787
Q ss_pred ecccccCccCcccCCCCCCCcEEEEcc
Q 021539 256 LDATGLVFGEDQLALALHRPDLVLCTL 282 (311)
Q Consensus 256 vDAaQsv~G~~pldl~~l~~Dfl~~S~ 282 (311)
+=|...- . . -....++|+++-++
T Consensus 170 vGG~~~~-~--~-~~~~~GaD~~~~da 192 (201)
T cd02070 170 VGGAPVN-Q--E-FADEIGADGYAEDA 192 (201)
T ss_pred EECCcCC-H--H-HHHHcCCcEEECCH
Confidence 7665322 1 1 13446888887554
No 402
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=29.63 E-value=46 Score=30.17 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=23.5
Q ss_pred cccchhcHHHH-HHHHHCCcEEEecccc
Q 021539 234 VNGTRYSMHWI-SEAHRNAWHVLLDATG 260 (311)
Q Consensus 234 ~tG~i~Pi~~I-~~a~~~g~~vlvDAaQ 260 (311)
..|+..+++++ .+||++|+.|++|.+-
T Consensus 47 ~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 47 RFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp TTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccchhhhhhhhhhccccccceEEEeeec
Confidence 48999999886 6689999999999974
No 403
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=26.11 E-value=33 Score=33.50 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=28.0
Q ss_pred ccCCCCCchhhHHHHH--HHhhccCccCCcccCC
Q 021539 29 WSGPITPTEMQYVEQY--VFAKYPQYYNGIVEPE 60 (311)
Q Consensus 29 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (311)
|+|...-.||=|+|+| +.|+.|+|--++.+.+
T Consensus 310 WYGARS~rE~fY~Ed~d~L~ae~pNF~wH~aLSd 343 (410)
T COG2871 310 WYGARSLREMFYQEDFDQLQAENPNFHWHLALSD 343 (410)
T ss_pred eeccchHHHhHHHHHHHHHHhhCCCcEEEEEecC
Confidence 9999999999999998 6899999987776644
No 404
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=25.47 E-value=56 Score=33.20 Aligned_cols=26 Identities=23% Similarity=0.239 Sum_probs=23.2
Q ss_pred cccchhcHHHH-HHHHHCCcEEEeccc
Q 021539 234 VNGTRYSMHWI-SEAHRNAWHVLLDAT 259 (311)
Q Consensus 234 ~tG~i~Pi~~I-~~a~~~g~~vlvDAa 259 (311)
..|+..+++++ .+||++|+.|++|++
T Consensus 76 ~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 76 KYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred CcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 48999999986 668999999999997
No 405
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=24.93 E-value=88 Score=24.47 Aligned_cols=21 Identities=10% Similarity=0.086 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCC
Q 021539 125 SIPEIQARNRALKHCGLSEDE 145 (311)
Q Consensus 125 ~~~le~aR~~IA~~Lga~~de 145 (311)
+....+.|+.||+++|++++.
T Consensus 12 Tpsr~ei~~klA~~~~~~~~~ 32 (84)
T PF01282_consen 12 TPSRKEIREKLAAMLNVDPDL 32 (84)
T ss_dssp S--HHHHHHHHHHHHTSTGCC
T ss_pred CCCHHHHHHHHHHHhCCCCCe
Confidence 344568999999999998654
No 406
>smart00642 Aamy Alpha-amylase domain.
Probab=24.20 E-value=70 Score=27.88 Aligned_cols=26 Identities=27% Similarity=0.306 Sum_probs=22.5
Q ss_pred cccchhcHHHH-HHHHHCCcEEEeccc
Q 021539 234 VNGTRYSMHWI-SEAHRNAWHVLLDAT 259 (311)
Q Consensus 234 ~tG~i~Pi~~I-~~a~~~g~~vlvDAa 259 (311)
..|+...++++ .+||++|+.+++|.+
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 37998888886 668999999999987
No 407
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=23.88 E-value=4.7e+02 Score=27.40 Aligned_cols=123 Identities=15% Similarity=0.060 Sum_probs=67.5
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCCCCCCCEEE---EccCcC-hHHHHHHHHhCCcEE
Q 021539 121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYPFFKGNYYL---TIISEE-SDYIKGFAAQKESKV 195 (311)
Q Consensus 121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~~~~Gd~Il---s~~eh~-~~~~~~la~~~G~~V 195 (311)
++++...+.-|-+.|-+++--.-.+.+|+.|-+.+-.+|.++. +....+.-+|+ |--.-+ -..++.|. ..|+.+
T Consensus 335 ~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv-~~Ginc 413 (556)
T KOG1467|consen 335 DRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLV-DRGINC 413 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHH-HcCCCe
Confidence 6666666666777777776554445569999888888776544 33222323333 111111 22345554 459998
Q ss_pred EEEeCCCCCcccCHHHHHhhhhccCCCCCceEE-EEecc-cccchhcH---HHHHH-HHHCCcEEEecc
Q 021539 196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLF-SYPVV-VNGTRYSM---HWISE-AHRNAWHVLLDA 258 (311)
Q Consensus 196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LV-s~~~~-~tG~i~Pi---~~I~~-a~~~g~~vlvDA 258 (311)
.++=.+.. .++-... +++| ..++. ++|.++.= .-|+. ++.++++|+|=+
T Consensus 414 tYv~I~a~----------syim~ev----tkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCC 468 (556)
T KOG1467|consen 414 TYVLINAA----------SYIMLEV----TKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCC 468 (556)
T ss_pred EEEEehhH----------HHHHHhc----ceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEe
Confidence 88766431 1121221 2343 23333 68887652 23455 377888777644
No 408
>PF10937 DUF2638: Protein of unknown function (DUF2638); InterPro: IPR020373 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents a component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S). This entry is represented by a mitochondrial ribosomal protein of the small subunit, which has similarity to human mitochondrial ribosomal protein MRP-S36 [, , ].
Probab=23.60 E-value=36 Score=28.29 Aligned_cols=19 Identities=26% Similarity=0.428 Sum_probs=15.6
Q ss_pred ccCcc-ccCCCCCchhhHHH
Q 021539 24 GLGLR-WSGPITPTEMQYVE 42 (311)
Q Consensus 24 ~~~~~-~~~~~~~~~~~~~~ 42 (311)
.|=.| |..|+++.||+|||
T Consensus 89 eLP~Rfrr~p~se~EiE~In 108 (112)
T PF10937_consen 89 ELPARFRRKPISEEEIEAIN 108 (112)
T ss_pred HcCHhHccCCCCHHHHHHHH
Confidence 34556 68999999999997
No 409
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=22.85 E-value=4.3e+02 Score=21.62 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=44.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEc-cCcC-hHHHHHHHHhCCcEEEEEeC
Q 021539 130 QARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTI-ISEE-SDYIKGFAAQKESKVIAAPE 200 (311)
Q Consensus 130 ~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~-~eh~-~~~~~~la~~~G~~V~~vp~ 200 (311)
+.=+.|++-+|++. +-| =||--|+-..+++-.|| +|+.. .++. ..-+..||+++|+.|+..|-
T Consensus 23 ~~v~~i~~~~gI~d----iN~IKPGIgEaTRvLLRRvP~----~vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 23 AEVERIAERYGISD----INLIKPGIGEATRVLLRRVPW----KVLVRDPDDPDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHhCCCC----cccccCChhHHHHHHHhcCCC----EEEECCCCCccHHHHHHHHHHcCCcEEEeCC
Confidence 44566888999963 333 48999999999998886 34422 2222 33467889999999988764
No 410
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=22.28 E-value=6.9e+02 Score=23.85 Aligned_cols=115 Identities=10% Similarity=0.004 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHHcCC--CCCCCeEEEeC-CHHHHHHHHHhcCCCCCCC--EEEEccCcC----hHHHHHHHHhCCcE
Q 021539 124 ISIPEIQARNRALKHCGL--SEDEYLVLFVP-NYKEAMLMIGESYPFFKGN--YYLTIISEE----SDYIKGFAAQKESK 194 (311)
Q Consensus 124 ~~~~le~aR~~IA~~Lga--~~dey~VvFTs-naTealnlv~~s~~~~~Gd--~Ils~~eh~----~~~~~~la~~~G~~ 194 (311)
.....++++++|+++--- .+.+ +|+|- |+..++..+.... ..|. +|+..-..+ ....++|. +.|+.
T Consensus 88 ~~~~~~~~~~~I~~~a~~~I~~g~--~ILTh~~S~tv~~~l~~A~--~~gk~~~V~v~EsrP~~qG~~la~eL~-~~GI~ 162 (275)
T PRK08335 88 FLRLMEEAKREIGNIGSELIDDGD--VIITHSFSSAVLEILKTAK--RKGKRFKVILTESAPDYEGLALANELE-FLGIE 162 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC--EEEEECCcHHHHHHHHHHH--HcCCceEEEEecCCCchhHHHHHHHHH-HCCCC
Confidence 334445777777543321 1233 77885 4445555554443 2343 343221122 12234554 45999
Q ss_pred EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHH--HHH-HHHCCcEEEe
Q 021539 195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHW--ISE-AHRNAWHVLL 256 (311)
Q Consensus 195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~--I~~-a~~~g~~vlv 256 (311)
|..++-+. +...+++ . ..-+|....+ .+| +.+.+.. ++. ||.+|++|+|
T Consensus 163 vtlI~Dsa---------~~~~m~~-v---d~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 163 FEVITDAQ---------LGLFAKE-A---TLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred EEEEeccH---------HHHHHHh-C---CEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 88876432 1122322 2 1223322222 466 5566654 344 5899999988
No 411
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=21.50 E-value=4.1e+02 Score=27.19 Aligned_cols=88 Identities=11% Similarity=-0.007 Sum_probs=53.7
Q ss_pred HHHHHhCC-cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHC--CcEEEecccc
Q 021539 185 KGFAAQKE-SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRN--AWHVLLDATG 260 (311)
Q Consensus 185 ~~la~~~G-~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQ 260 (311)
....++.| .+|.++.... ..++.+++.+.++.. ...+|+++.. +.......++.+ +|+. ++.+++=|.|
T Consensus 29 Aa~L~~~G~~~V~iiD~~~--~~~~~~~~~~~l~~~----~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAMT--GPLTDEKLVERLRAH----CPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred HHHHHhcCCcceEEecccc--cCCCHHHHHHHHHhc----CcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 33345568 6899887653 346778887777653 1468888754 445555556644 5654 9999998887
Q ss_pred cCccCcccC-CCC-CCCcEEEEc
Q 021539 261 LVFGEDQLA-LAL-HRPDLVLCT 281 (311)
Q Consensus 261 sv~G~~pld-l~~-l~~Dfl~~S 281 (311)
+- - .+-+ +.. -.+|+++..
T Consensus 102 ~t-~-~~~~~l~~~p~vD~Vv~G 122 (497)
T TIGR02026 102 PT-F-MFHQVLTEAPWIDFIVRG 122 (497)
T ss_pred cC-c-CHHHHHhcCCCccEEEeC
Confidence 54 2 1212 222 258888763
No 412
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=21.31 E-value=7.3e+02 Score=23.76 Aligned_cols=113 Identities=10% Similarity=0.086 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHcC--CCCCCCeEEEeCCHH-HHHHHHHhcCCCCCCC--EEEEccCcC---h-HHHHHHHHhCCcEEE
Q 021539 126 IPEIQARNRALKHCG--LSEDEYLVLFVPNYK-EAMLMIGESYPFFKGN--YYLTIISEE---S-DYIKGFAAQKESKVI 196 (311)
Q Consensus 126 ~~le~aR~~IA~~Lg--a~~dey~VvFTsnaT-ealnlv~~s~~~~~Gd--~Ils~~eh~---~-~~~~~la~~~G~~V~ 196 (311)
..+++++++|+++-. ..+.+ +|+|-+.+ .....+..... .|. +|+..-..+ . ...++|. +.|+.+.
T Consensus 96 ~e~~~a~~~I~~~a~~~i~~g~--~ILT~~~S~tv~~~l~~a~~--~~~~f~V~v~EsrP~~~G~~~a~~L~-~~gI~vt 170 (301)
T TIGR00511 96 NQSDKAQERIGEIGAKRIRDGD--VVMTHCNSEAALSVIKTAFE--QGKDIEVIATETRPRKQGHITAKELR-DYGIPVT 170 (301)
T ss_pred HHHHHHHHHHHHHHHHHcCCCC--EEEEECCcHHHHHHHHHHHH--cCCcEEEEEecCCCcchHHHHHHHHH-HCCCCEE
Confidence 345677888766542 12233 78886544 34444443332 333 333111112 1 1234444 4599998
Q ss_pred EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHH--HHH-HHHCCcEEEe
Q 021539 197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHW--ISE-AHRNAWHVLL 256 (311)
Q Consensus 197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~--I~~-a~~~g~~vlv 256 (311)
.++-.. +...+.+ + ..-++....+ .+| ++..+.. ++. ||.++++|+|
T Consensus 171 lI~Dsa---------~~~~m~~-v---d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 171 LIVDSA---------VRYFMKE-V---DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred EEehhH---------HHHHHHh-C---CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 886431 2223332 2 1223322222 466 5566654 454 4888888776
No 413
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=20.68 E-value=3.6e+02 Score=23.73 Aligned_cols=65 Identities=17% Similarity=0.147 Sum_probs=38.4
Q ss_pred HHHHHHhCCcEEEEE-eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHHHHHCCcEEEe
Q 021539 184 IKGFAAQKESKVIAA-PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLL 256 (311)
Q Consensus 184 ~~~la~~~G~~V~~v-p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~a~~~g~~vlv 256 (311)
++..++..|+++.++ +... +..-..+.+++++..+. -.++..+...+... ..+.++++.|++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~-d~~~q~~~i~~~i~~~~----d~Iiv~~~~~~~~~---~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQN-DPEEQIEQIEQAISQGV----DGIIVSPVDPDSLA---PFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTT-THHHHHHHHHHHHHTTE----SEEEEESSSTTTTH---HHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCC-CHHHHHHHHHHHHHhcC----CEEEecCCCHHHHH---HHHHHHhhcCceEEE
Confidence 455567789999886 5543 33333455677777653 35554443333332 345668889998665
No 414
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=20.19 E-value=6.2e+02 Score=22.46 Aligned_cols=90 Identities=7% Similarity=0.069 Sum_probs=54.9
Q ss_pred hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHH-HHHHHC----CcEEE
Q 021539 181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWI-SEAHRN----AWHVL 255 (311)
Q Consensus 181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I-~~a~~~----g~~vl 255 (311)
.+.+..+.+..|++|+++-.+ +..+.+.+.+.+. +..+|+++...+-....+.++ ..+++. ++.++
T Consensus 101 ~~~v~~~l~~~G~~vi~LG~~-----vp~e~~v~~~~~~----~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~ 171 (197)
T TIGR02370 101 KNIVVTMLRANGFDVIDLGRD-----VPIDTVVEKVKKE----KPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFM 171 (197)
T ss_pred HHHHHHHHHhCCcEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEE
Confidence 344566677889999987554 4567777777653 246888776534444445554 445554 36777
Q ss_pred ecccccCccCcccCCCCCCCcEEEEccc
Q 021539 256 LDATGLVFGEDQLALALHRPDLVLCTLD 283 (311)
Q Consensus 256 vDAaQsv~G~~pldl~~l~~Dfl~~S~H 283 (311)
+=|...- . .+ .+..++|+++-++.
T Consensus 172 vGG~~~~-~--~~-~~~~gad~~~~da~ 195 (197)
T TIGR02370 172 VGGAPVT-Q--DW-ADKIGADVYGENAS 195 (197)
T ss_pred EEChhcC-H--HH-HHHhCCcEEeCChh
Confidence 7664332 1 11 24578898876654
Done!