BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021540
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66JG8|ALKB5_XENTR RNA demethylase ALKBH5 OS=Xenopus tropicalis GN=alkbh5 PE=2 SV=1
Length = 358
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 152 IFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNG 211
+FS E RI + + KG +E T R R FG Y Y
Sbjct: 60 LFSPDECARIEAKIDEVVSRAEKGLYREHTVD------RAPLRNKYFFGEGYTYGAQLQR 113
Query: 212 NPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHID 267
PG + P VD +P + +++IRRLV+ V+P V +S ++N Y+ G CI H+D
Sbjct: 114 RGPGQERLYPKGEVDEIPAWVNELVIRRLVEHRVIPEGFV-NSAVINDYQPGGCIVSHVD 172
Query: 268 N-HDFVRPFCTVSFLSECNIVFGSNLK 293
H F RP +VSF S+ + FG +
Sbjct: 173 PIHIFERPIVSVSFFSDSALCFGCKFQ 199
>sp|Q6GPB5|ALKB5_XENLA RNA demethylase ALKBH5 OS=Xenopus laevis GN=alkbh5 PE=2 SV=1
Length = 360
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 199 FGCCYNYATDKNGNPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVN 254
FG Y Y PG + P VD +P + +++IRRLV+ ++P V +S ++N
Sbjct: 103 FGEGYTYGAQLQRRGPGQERLYPKGEVDEIPGWVHELVIRRLVERRIIPEGFV-NSAVIN 161
Query: 255 IYEEGDCIPPHIDN-HDFVRPFCTVSFLSECNIVFGSNLK 293
Y+ G CI H+D H F RP +VSF S+ + FG +
Sbjct: 162 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQ 201
>sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5 OS=Rattus norvegicus GN=Alkbh5 PE=3 SV=1
Length = 395
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 199 FGCCYNYATDKNGNPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVN 254
FG Y Y PG + P VD +P + +++I++LV+ V+P V +S ++N
Sbjct: 136 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 194
Query: 255 IYEEGDCIPPHIDN-HDFVRPFCTVSFLSECNIVFGS--NLKVVGAGEFAGSIPI 306
Y+ G CI H+D H F RP +VSF S+ + FG K + E S+P+
Sbjct: 195 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPV 249
>sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2
Length = 394
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 199 FGCCYNYATDKNGNPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVN 254
FG Y Y PG + P VD +P + +++I++LV+ V+P V +S ++N
Sbjct: 135 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 193
Query: 255 IYEEGDCIPPHIDN-HDFVRPFCTVSFLSECNIVFGS--NLKVVGAGEFAGSIPI 306
Y+ G CI H+D H F RP +VSF S+ + FG K + E S+P+
Sbjct: 194 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPV 248
>sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5 OS=Mus musculus GN=Alkbh5 PE=1 SV=2
Length = 395
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 199 FGCCYNYATDKNGNPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVN 254
FG Y Y PG + P VD +P + +++I++LV+ V+P V +S ++N
Sbjct: 136 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPDWVHQLVIQKLVEHRVIPEGFV-NSAVIN 194
Query: 255 IYEEGDCIPPHIDN-HDFVRPFCTVSFLSECNIVFGS--NLKVVGAGEFAGSIPI 306
Y+ G CI H+D H F RP +VSF S+ + FG K + E S+P+
Sbjct: 195 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPV 249
>sp|E1BH29|ALKB5_BOVIN RNA demethylase ALKBH5 OS=Bos taurus GN=ALKBH5 PE=3 SV=1
Length = 394
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 199 FGCCYNYATDKNGNPPGILQNEP---VDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVN 254
FG Y Y PG + P VD +P + +++I++LV+ V+P V +S ++N
Sbjct: 135 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 193
Query: 255 IYEEGDCIPPHIDN-HDFVRPFCTVSFLSECNIVFGS--NLKVVGAGEFAGSIPI 306
Y+ G CI H+D H F RP +VSF S+ + FG K + E S+P+
Sbjct: 194 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPV 248
>sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5 OS=Danio rerio GN=alkbh5 PE=2 SV=1
Length = 352
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 151 GIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKN 210
IF+ E RI + + KG +E T R R FG Y Y
Sbjct: 61 SIFTLEECARIEAKIDEVVAKADKGLYREHTVD------RAPLRNKYFFGEGYTYGAQLE 114
Query: 211 GNPPG---ILQNEPVDPLPH-LFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHI 266
PG + VD +P + +++I RLV V+P V +S ++N Y+ G CI H+
Sbjct: 115 KRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFV-NSAVINDYQPGGCIVSHV 173
Query: 267 DN-HDFVRPFCTVSFLSECNIVFG 289
D H F RP +VSF S+ + FG
Sbjct: 174 DPIHIFERPIVSVSFFSDSALCFG 197
>sp|A4QKQ3|YCF1_CAPBU Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A
PE=3 SV=1
Length = 1789
Score = 36.2 bits (82), Expect = 0.32, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 20/105 (19%)
Query: 34 GGSEPDQEASASSGLAFESHLAETPSPRM---SWADMAQEDELEEEGEEEQCKVNKQVND 90
GG++ DQE S AE P P + D+ + DE+EE E+ K+NK +D
Sbjct: 259 GGTKQDQEVST----------AEAPFPSLFSEEGEDLDKIDEMEEIRVNEKDKINK--DD 306
Query: 91 GVNVLKEESSVSKVVQKPMLSREEREHMRFMHVRRKKD-FICLEK 134
+V + K V + + +E ++ F +++K+D F+ EK
Sbjct: 307 EFHV----RTYYKTVSENLDGNKENSNLEFFKIKKKEDHFLWFEK 347
>sp|Q6DKG0|NAA35_RAT N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Rattus
norvegicus GN=Naa35 PE=2 SV=1
Length = 725
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P C+ N ++ DCI + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCCLYNNHQAKDCIDSFVTH--CVRPFCSL 435
>sp|Q6PHQ8|NAA35_MOUSE N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Mus
musculus GN=Naa35 PE=1 SV=1
Length = 725
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P C+ N ++ DCI + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCCLYNNHQAKDCIDSFVTH--CVRPFCSL 435
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 192 KGRITIQFGCCYNY---ATDKNGNPPGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVP 248
K R FG ++Y DK+ PG LP + I+ +L+K + P
Sbjct: 172 KHRRVKHFGYEFHYESNTVDKDKPLPG--------GLPEVCSSILEKLLKEGYIKHK--P 221
Query: 249 DSCIVNIYEEGDCIPPHIDNH 269
D +N YE G IP HID H
Sbjct: 222 DQLTINQYEPGHGIPAHIDTH 242
>sp|Q8BUR4|DOCK1_MOUSE Dedicator of cytokinesis protein 1 OS=Mus musculus GN=Dock1 PE=1
SV=3
Length = 1865
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 149 HEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITI 197
H+ I AE K++ D L+ TKGEL+EK +SA K M+ G TI
Sbjct: 549 HDLIVYKAEAKKLEDAATYLSLPSTKGELEEKGHSATGKGMQSLGSCTI 597
>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis
GN=alkbh8 PE=2 SV=2
Length = 628
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 192 KGRITIQFGCCYNY---ATDKNGNPPGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVP 248
K R +G + Y DK+ PG L + + L K + R L+K P
Sbjct: 170 KHRQVKHYGYEFRYDNNNVDKDKPLPGGLPDFCTEALR---KCVQRGLIKHD-------P 219
Query: 249 DSCIVNIYEEGDCIPPHIDNH 269
D +N YE G IPPH+D H
Sbjct: 220 DQLTINQYEPGQGIPPHVDTH 240
>sp|Q75JP5|Y2471_DICDI Calponin homology domain-containing protein DDB_G0272472
OS=Dictyostelium discoideum GN=DDB_G0272472 PE=4 SV=1
Length = 1508
Score = 33.5 bits (75), Expect = 2.2, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 55 AETPSPRMSWADMAQEDELEEEGEEEQCKVNKQVNDGVNVLKEESSVSKVVQKPMLSREE 114
AE + A +++ LE+E EE++ K++ + N + +E +++ ++K L +EE
Sbjct: 848 AEKLKQQQELAAKLEKERLEKEAEEKRIAQEKRIAEE-NRIAQEKKIAEELEKKRLQKEE 906
Query: 115 REHMRFMHVRRKKDFICLEKIKGKIVNILAGLELHEGIFSAAEQKRIVD 163
++ + + RK+ LEK + + I LE AAE KRI D
Sbjct: 907 QDRLAAAELERKR----LEK-EAEEKRIAQELEKKRLEKEAAEVKRIAD 950
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 145 GLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYN 204
GL++ E I S+ ++K +++ V+ + T+ + +K+ K R FG ++
Sbjct: 136 GLKVIEEIISSEDEKMLLESVNWTED--TENQNFQKSL---------KHRRVKHFGYEFH 184
Query: 205 YA---TDKNGNPPGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDC 261
Y DK+ PG LP + + I+ + +K + PD +N YE G
Sbjct: 185 YENNNVDKDKPLPG--------GLPDICESILEKWLKEGFIKHK--PDQLTINQYEPGHG 234
Query: 262 IPPHIDNHD-FVRPFCTVSFLSECNIVF 288
IP HID H F ++S SE + F
Sbjct: 235 IPAHIDTHSAFEDEIISLSLGSEIVMDF 262
>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L905 PE=4 SV=1
Length = 210
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 220 EPVD--PLPHLFKVIIRRLVKWHVLPPTC--VPDSCIVNIYEEGDCIPPHIDNHDFVRPF 275
EP D P+P+ + +L+ +L PD IVN Y+ G+ + PH D D+ +
Sbjct: 59 EPYDLIPIPNKIPKYLDQLINQMILDKIIDQKPDQIIVNEYKPGEGLKPHFDRKDYYQ-- 116
Query: 276 CTVSFLSECNIVFGSNLKVVGAGEFAGSIPI 306
N++ G +L EF + PI
Sbjct: 117 ---------NVIIGLSLGSGTIMEFYKNKPI 138
>sp|Q4R708|NAA35_MACFA N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Macaca
fascicularis GN=NAA35 PE=2 SV=1
Length = 725
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P + N ++ DCI + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCYLYNNHQAKDCIDSFVTH--CVRPFCSL 435
>sp|Q5ZHV2|NAA35_CHICK N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Gallus
gallus GN=NAA35 PE=2 SV=1
Length = 725
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P C+ N ++ D I + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCCLYNNHQAKDYIDSFVTH--CVRPFCSL 435
>sp|Q5RBT3|NAA35_PONAB N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Pongo
abelii GN=NAA35 PE=2 SV=1
Length = 725
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P + N ++ DCI + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCYLYNNHQAKDCIDSFVTH--CVRPFCSL 435
>sp|Q5VZE5|NAA35_HUMAN N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Homo
sapiens GN=NAA35 PE=1 SV=1
Length = 725
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 227 HLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 278
HL + +++ ++ V PP P + N ++ DCI + + VRPFC++
Sbjct: 386 HLMQDMVKDALRSFVSPPVLSPKCYLYNNHQAKDCIDSFVTH--CVRPFCSL 435
>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens
GN=ALKBH8 PE=1 SV=2
Length = 664
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 248 PDSCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLSECNIVF 288
PD +N YE G IP HID H F ++S SE + F
Sbjct: 221 PDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDF 262
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 248 PDSCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLSECNIVF 288
PD +N YE G IP HID H F ++S SE + F
Sbjct: 221 PDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDF 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,412,006
Number of Sequences: 539616
Number of extensions: 5805457
Number of successful extensions: 19736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 19591
Number of HSP's gapped (non-prelim): 163
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)