Query 021545
Match_columns 311
No_of_seqs 203 out of 1796
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 05:41:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j0a_A 1-aminocyclopropane-1-c 100.0 8.3E-46 2.8E-50 349.4 18.7 252 24-295 1-272 (325)
2 4d9b_A D-cysteine desulfhydras 100.0 1.4E-43 4.6E-48 336.7 18.3 256 29-295 17-291 (342)
3 1f2d_A 1-aminocyclopropane-1-c 100.0 3.9E-41 1.3E-45 319.4 19.1 256 32-295 3-285 (341)
4 4aec_A Cysteine synthase, mito 100.0 1E-40 3.6E-45 324.9 16.6 257 11-295 72-368 (430)
5 1tzj_A ACC deaminase, 1-aminoc 100.0 6.4E-40 2.2E-44 310.3 19.2 255 32-295 3-284 (338)
6 2egu_A Cysteine synthase; O-ac 100.0 1.2E-37 4.1E-42 291.4 17.7 230 39-295 7-257 (308)
7 2q3b_A Cysteine synthase A; py 100.0 4.5E-37 1.5E-41 288.1 18.8 231 39-295 9-260 (313)
8 1y7l_A O-acetylserine sulfhydr 100.0 7.9E-37 2.7E-41 286.8 19.9 232 39-295 6-263 (316)
9 2v03_A Cysteine synthase B; py 100.0 1.9E-36 6.3E-41 283.0 20.6 224 39-295 3-246 (303)
10 3l6b_A Serine racemase; pyrido 100.0 9E-38 3.1E-42 297.2 11.7 228 39-295 18-276 (346)
11 1ve1_A O-acetylserine sulfhydr 100.0 4.6E-37 1.6E-41 287.0 16.0 229 40-295 3-254 (304)
12 3tbh_A O-acetyl serine sulfhyd 100.0 1.6E-36 5.6E-41 287.3 19.9 231 39-295 14-265 (334)
13 3dwg_A Cysteine synthase B; su 100.0 9.5E-37 3.2E-41 287.8 18.0 228 39-295 8-258 (325)
14 2pqm_A Cysteine synthase; OASS 100.0 7.4E-37 2.5E-41 290.5 16.9 231 39-295 16-271 (343)
15 1z7w_A Cysteine synthase; tran 100.0 9.1E-37 3.1E-41 287.2 17.1 231 39-295 8-260 (322)
16 4h27_A L-serine dehydratase/L- 100.0 5.8E-37 2E-41 293.5 15.5 235 32-295 34-296 (364)
17 2d1f_A Threonine synthase; ami 100.0 9E-37 3.1E-41 291.7 14.9 247 21-295 10-289 (360)
18 3aey_A Threonine synthase; PLP 100.0 1.7E-36 5.7E-41 288.7 15.8 230 39-295 21-280 (351)
19 1p5j_A L-serine dehydratase; l 100.0 3.2E-36 1.1E-40 289.2 17.4 239 27-295 30-296 (372)
20 2rkb_A Serine dehydratase-like 100.0 4.2E-36 1.4E-40 282.1 16.1 224 44-295 5-256 (318)
21 3vc3_A Beta-cyanoalnine syntha 100.0 1E-35 3.5E-40 282.9 19.0 232 39-295 28-280 (344)
22 2zsj_A Threonine synthase; PLP 100.0 2.8E-36 9.6E-41 287.2 14.9 245 22-295 3-282 (352)
23 2gn0_A Threonine dehydratase c 100.0 1E-36 3.4E-41 289.4 10.8 228 39-295 33-288 (342)
24 1o58_A O-acetylserine sulfhydr 100.0 6.1E-36 2.1E-40 279.5 13.7 229 40-295 14-258 (303)
25 3pc3_A CG1753, isoform A; CBS, 100.0 3.5E-35 1.2E-39 293.5 20.1 234 39-295 53-314 (527)
26 1v71_A Serine racemase, hypoth 100.0 4.5E-36 1.6E-40 282.6 11.5 228 39-295 19-274 (323)
27 1ve5_A Threonine deaminase; ri 100.0 4.8E-36 1.6E-40 280.8 11.2 230 39-295 13-270 (311)
28 1tdj_A Biosynthetic threonine 100.0 1.6E-35 5.5E-40 293.8 9.9 229 38-295 23-279 (514)
29 4d9i_A Diaminopropionate ammon 100.0 2.7E-34 9.3E-39 277.9 17.1 228 44-294 42-325 (398)
30 1jbq_A B, cystathionine beta-s 100.0 3.8E-34 1.3E-38 279.6 16.1 234 39-295 101-362 (435)
31 3ss7_X D-serine dehydratase; t 100.0 3.7E-34 1.3E-38 280.5 16.1 238 37-295 69-377 (442)
32 3iau_A Threonine deaminase; py 100.0 5.2E-35 1.8E-39 280.1 7.2 233 34-295 48-308 (366)
33 1x1q_A Tryptophan synthase bet 100.0 4.1E-33 1.4E-37 271.3 12.9 237 43-295 74-365 (418)
34 1wkv_A Cysteine synthase; homo 100.0 1.2E-31 4.2E-36 258.5 17.4 223 45-295 95-332 (389)
35 1v8z_A Tryptophan synthase bet 100.0 2.3E-32 7.8E-37 263.2 12.3 234 45-295 49-336 (388)
36 1qop_B Tryptophan synthase bet 100.0 4.1E-31 1.4E-35 255.4 14.0 233 45-295 54-340 (396)
37 2o2e_A Tryptophan synthase bet 100.0 1.6E-30 5.4E-35 253.4 14.6 195 43-254 78-286 (422)
38 1e5x_A Threonine synthase; thr 100.0 1.2E-29 4.3E-34 251.1 17.1 226 40-294 124-394 (486)
39 1vb3_A Threonine synthase; PLP 99.9 7.2E-27 2.5E-31 228.0 8.5 222 45-293 82-343 (428)
40 4f4f_A Threonine synthase; str 99.8 2.5E-20 8.7E-25 183.1 14.6 178 46-255 93-289 (468)
41 1kl7_A Threonine synthase; thr 99.8 1.8E-19 6.2E-24 179.0 16.3 191 44-255 94-307 (514)
42 3v7n_A Threonine synthase; ssg 99.8 2.4E-19 8.1E-24 176.7 14.9 183 47-254 103-303 (487)
43 3d02_A Putative LACI-type tran 89.5 9.8 0.00034 33.0 15.8 160 80-251 51-224 (303)
44 8abp_A L-arabinose-binding pro 88.7 8.1 0.00028 33.6 13.3 163 79-253 46-235 (306)
45 3gbv_A Putative LACI-family tr 87.8 8.6 0.00029 33.3 12.8 162 78-252 57-234 (304)
46 3fwz_A Inner membrane protein 86.5 9 0.00031 29.9 11.1 31 92-124 8-38 (140)
47 3hut_A Putative branched-chain 86.0 9.4 0.00032 34.1 12.3 154 82-256 63-233 (358)
48 3m9w_A D-xylose-binding peripl 85.3 7.2 0.00025 34.3 11.0 160 80-251 48-223 (313)
49 4fn4_A Short chain dehydrogena 84.5 14 0.00047 32.6 12.3 57 90-155 7-63 (254)
50 3l6u_A ABC-type sugar transpor 82.2 22 0.00075 30.5 12.7 160 80-251 54-229 (293)
51 3gbc_A Pyrazinamidase/nicotina 81.8 2.3 7.9E-05 35.7 5.8 62 87-151 121-183 (186)
52 3v8e_A Nicotinamidase; hydrola 81.7 3.2 0.00011 35.7 6.8 64 87-151 150-214 (216)
53 3ipc_A ABC transporter, substr 81.2 27 0.00091 31.0 13.2 154 81-255 60-231 (356)
54 1tjy_A Sugar transport protein 81.1 28 0.00097 30.6 15.2 162 78-251 48-223 (316)
55 3pgx_A Carveol dehydrogenase; 80.9 16 0.00054 31.9 11.4 32 92-125 17-48 (280)
56 3pi7_A NADH oxidoreductase; gr 80.4 5.7 0.0002 36.2 8.5 63 79-153 153-215 (349)
57 1vp8_A Hypothetical protein AF 79.8 16 0.00054 31.3 10.1 79 74-155 27-106 (201)
58 1im5_A 180AA long hypothetical 79.0 3.3 0.00011 34.3 5.8 62 87-151 116-178 (180)
59 3uve_A Carveol dehydrogenase ( 78.8 25 0.00084 30.7 11.9 34 90-125 11-44 (286)
60 2wt9_A Nicotinamidase; hydrola 78.5 4.6 0.00016 35.1 6.8 64 87-152 163-227 (235)
61 3t7c_A Carveol dehydrogenase; 78.3 35 0.0012 30.0 13.7 34 90-125 28-61 (299)
62 3r2j_A Alpha/beta-hydrolase-li 77.9 5.3 0.00018 34.7 7.0 65 87-154 153-218 (227)
63 4ggo_A Trans-2-enoyl-COA reduc 77.0 22 0.00076 33.7 11.4 100 92-227 51-151 (401)
64 3r1i_A Short-chain type dehydr 76.5 33 0.0011 30.0 12.0 34 90-125 32-65 (276)
65 3g1w_A Sugar ABC transporter; 75.7 39 0.0013 29.2 14.9 160 78-251 49-222 (305)
66 3oec_A Carveol dehydrogenase ( 75.6 44 0.0015 29.8 13.1 32 92-125 48-79 (317)
67 3hu5_A Isochorismatase family 75.3 3.9 0.00013 34.7 5.3 64 87-153 122-186 (204)
68 3e03_A Short chain dehydrogena 74.6 33 0.0011 29.7 11.5 33 92-126 8-40 (274)
69 3v2g_A 3-oxoacyl-[acyl-carrier 74.6 42 0.0014 29.1 12.2 55 92-154 33-87 (271)
70 3lop_A Substrate binding perip 74.3 47 0.0016 29.5 14.0 152 83-255 65-234 (364)
71 3rot_A ABC sugar transporter, 73.9 43 0.0015 28.9 15.5 159 78-251 49-226 (297)
72 3eef_A N-carbamoylsarcosine am 73.6 9.6 0.00033 31.5 7.3 62 87-154 106-169 (182)
73 3tjr_A Short chain dehydrogena 73.6 35 0.0012 30.2 11.5 32 92-125 33-64 (301)
74 3o94_A Nicotinamidase; hydrola 73.5 5.5 0.00019 34.2 5.8 63 87-152 139-203 (211)
75 4iin_A 3-ketoacyl-acyl carrier 73.4 38 0.0013 29.2 11.6 32 93-125 31-62 (271)
76 3qiv_A Short-chain dehydrogena 73.2 33 0.0011 29.0 11.0 31 92-124 11-41 (253)
77 3pxx_A Carveol dehydrogenase; 73.0 45 0.0015 28.7 13.5 34 90-125 10-43 (287)
78 4dmm_A 3-oxoacyl-[acyl-carrier 73.0 40 0.0014 29.2 11.6 55 92-154 30-84 (269)
79 3k4h_A Putative transcriptiona 72.7 44 0.0015 28.5 19.5 157 79-251 58-229 (292)
80 3is3_A 17BETA-hydroxysteroid d 72.5 37 0.0013 29.3 11.3 55 92-154 20-74 (270)
81 2jah_A Clavulanic acid dehydro 72.4 43 0.0015 28.5 11.5 31 92-124 9-39 (247)
82 4gkb_A 3-oxoacyl-[acyl-carrier 72.4 49 0.0017 28.9 12.1 55 90-154 7-61 (258)
83 3ucx_A Short chain dehydrogena 72.2 36 0.0012 29.2 11.1 33 90-124 11-43 (264)
84 3edm_A Short chain dehydrogena 72.1 45 0.0015 28.6 11.7 33 92-126 10-42 (259)
85 3u5t_A 3-oxoacyl-[acyl-carrier 72.1 41 0.0014 29.1 11.5 58 89-154 26-83 (267)
86 4evq_A Putative ABC transporte 71.9 19 0.00064 32.2 9.4 147 83-250 74-239 (375)
87 2gk4_A Conserved hypothetical 71.9 4.8 0.00016 35.3 5.1 38 89-126 2-53 (232)
88 4g81_D Putative hexonate dehyd 71.6 22 0.00074 31.3 9.5 56 90-154 9-64 (255)
89 3iup_A Putative NADPH:quinone 71.2 9.8 0.00033 35.2 7.4 62 80-153 161-222 (379)
90 3s55_A Putative short-chain de 71.2 50 0.0017 28.5 13.5 32 92-125 12-43 (281)
91 1nf9_A Phenazine biosynthesis 71.1 5.7 0.00019 33.7 5.3 62 87-151 138-200 (207)
92 3ek2_A Enoyl-(acyl-carrier-pro 71.0 23 0.00079 30.3 9.5 33 92-125 16-49 (271)
93 3sc4_A Short chain dehydrogena 70.9 39 0.0013 29.5 11.2 33 92-126 11-43 (285)
94 3ksu_A 3-oxoacyl-acyl carrier 70.9 30 0.001 29.9 10.2 32 92-125 13-44 (262)
95 3two_A Mannitol dehydrogenase; 70.7 11 0.00036 34.3 7.4 48 92-152 178-225 (348)
96 1p9o_A Phosphopantothenoylcyst 70.4 13 0.00046 34.0 8.0 40 88-127 34-90 (313)
97 3gaf_A 7-alpha-hydroxysteroid 70.3 39 0.0013 28.9 10.8 54 92-154 14-67 (256)
98 3oid_A Enoyl-[acyl-carrier-pro 70.2 52 0.0018 28.2 11.7 33 90-124 4-36 (258)
99 3td9_A Branched chain amino ac 70.2 58 0.002 28.8 14.2 154 81-255 71-242 (366)
100 4fgs_A Probable dehydrogenase 70.0 41 0.0014 29.8 11.0 33 90-124 29-61 (273)
101 3osu_A 3-oxoacyl-[acyl-carrier 69.9 50 0.0017 27.9 11.5 54 93-154 7-60 (246)
102 3sg0_A Extracellular ligand-bi 69.8 60 0.002 28.8 14.4 153 82-255 80-252 (386)
103 3tg2_A Vibriobactin-specific i 69.5 5.7 0.0002 34.4 5.1 63 87-152 134-197 (223)
104 3v8b_A Putative dehydrogenase, 68.9 41 0.0014 29.4 10.8 33 90-124 28-60 (283)
105 3gv0_A Transcriptional regulat 68.4 56 0.0019 28.0 18.9 37 215-253 187-227 (288)
106 3ijr_A Oxidoreductase, short c 68.3 61 0.0021 28.3 11.9 56 91-154 48-103 (291)
107 4da9_A Short-chain dehydrogena 68.2 60 0.002 28.2 12.4 31 92-124 31-61 (280)
108 3awd_A GOX2181, putative polyo 68.2 54 0.0018 27.6 11.5 31 93-125 16-46 (260)
109 1zem_A Xylitol dehydrogenase; 68.2 53 0.0018 28.1 11.2 31 92-124 9-39 (262)
110 3rkr_A Short chain oxidoreduct 67.8 42 0.0014 28.7 10.5 32 92-125 31-62 (262)
111 4fs3_A Enoyl-[acyl-carrier-pro 67.8 58 0.002 28.0 11.4 35 90-125 6-41 (256)
112 1yac_A Ycacgp, YCAC gene produ 67.6 5.3 0.00018 34.1 4.4 64 86-152 100-164 (208)
113 3hcw_A Maltose operon transcri 67.2 61 0.0021 27.9 18.3 158 80-251 58-229 (295)
114 3sju_A Keto reductase; short-c 67.2 53 0.0018 28.5 11.1 34 90-125 24-57 (279)
115 3hb7_A Isochorismatase hydrola 67.1 5.6 0.00019 33.8 4.4 61 87-151 116-177 (204)
116 3ot4_A Putative isochorismatas 67.1 8.3 0.00028 33.7 5.6 63 87-152 155-218 (236)
117 4e3z_A Putative oxidoreductase 67.0 61 0.0021 27.8 11.8 55 93-155 29-83 (272)
118 3cxt_A Dehydrogenase with diff 66.7 59 0.002 28.5 11.4 31 92-124 36-66 (291)
119 3imf_A Short chain dehydrogena 66.7 35 0.0012 29.2 9.7 31 93-125 9-39 (257)
120 2rhc_B Actinorhodin polyketide 66.6 57 0.002 28.2 11.2 32 92-125 24-55 (277)
121 3lyl_A 3-oxoacyl-(acyl-carrier 66.2 49 0.0017 27.8 10.5 53 93-154 8-60 (247)
122 2uvd_A 3-oxoacyl-(acyl-carrier 66.0 60 0.002 27.4 11.6 30 93-124 7-36 (246)
123 3l9w_A Glutathione-regulated p 66.0 39 0.0013 31.8 10.6 48 92-152 5-52 (413)
124 2fvy_A D-galactose-binding per 65.9 64 0.0022 27.6 14.2 34 216-251 203-237 (309)
125 3nrc_A Enoyl-[acyl-carrier-pro 65.6 57 0.002 28.2 11.0 33 92-126 28-62 (280)
126 3tfo_A Putative 3-oxoacyl-(acy 65.4 67 0.0023 27.8 13.4 54 93-155 7-60 (264)
127 3ftp_A 3-oxoacyl-[acyl-carrier 65.1 56 0.0019 28.3 10.8 31 92-124 30-60 (270)
128 1j2r_A Hypothetical isochorism 64.6 5.9 0.0002 33.3 4.0 62 87-151 128-190 (199)
129 4a2c_A Galactitol-1-phosphate 64.2 18 0.00062 32.5 7.6 52 92-155 162-213 (346)
130 1yb1_A 17-beta-hydroxysteroid 64.1 70 0.0024 27.5 11.3 31 93-125 34-64 (272)
131 2fq1_A Isochorismatase; ENTB, 63.9 8.9 0.00031 34.2 5.3 64 87-153 141-205 (287)
132 3gqv_A Enoyl reductase; medium 63.8 18 0.00061 33.2 7.5 49 92-153 166-214 (371)
133 3pk0_A Short-chain dehydrogena 63.5 57 0.002 27.9 10.5 31 92-124 12-42 (262)
134 3sx2_A Putative 3-ketoacyl-(ac 63.5 71 0.0024 27.4 13.5 32 92-125 15-46 (278)
135 1g0o_A Trihydroxynaphthalene r 63.2 74 0.0025 27.5 11.6 31 93-125 32-62 (283)
136 3o38_A Short chain dehydrogena 63.1 70 0.0024 27.2 11.3 33 92-125 24-56 (266)
137 1x9g_A Putative MAR1; structur 62.9 4.4 0.00015 34.5 2.9 64 84-151 101-167 (200)
138 4eye_A Probable oxidoreductase 62.8 14 0.00047 33.6 6.5 49 92-152 161-209 (342)
139 3huu_A Transcription regulator 62.2 77 0.0026 27.3 18.3 35 215-251 201-239 (305)
140 4b4k_A N5-carboxyaminoimidazol 62.2 18 0.00062 30.4 6.5 58 202-267 67-124 (181)
141 3ai3_A NADPH-sorbose reductase 61.9 74 0.0025 27.0 11.3 30 93-124 10-39 (263)
142 1kol_A Formaldehyde dehydrogen 61.7 21 0.00071 33.0 7.6 48 92-151 187-234 (398)
143 3snr_A Extracellular ligand-bi 61.6 82 0.0028 27.5 16.6 152 82-255 60-228 (362)
144 1iy8_A Levodione reductase; ox 61.4 77 0.0026 27.1 11.3 32 92-125 15-46 (267)
145 3ksm_A ABC-type sugar transpor 61.4 72 0.0024 26.7 14.9 161 79-251 47-222 (276)
146 3a28_C L-2.3-butanediol dehydr 61.4 75 0.0026 26.9 11.4 30 93-124 5-34 (258)
147 3nx4_A Putative oxidoreductase 61.2 24 0.00081 31.4 7.7 47 94-152 150-196 (324)
148 1ae1_A Tropinone reductase-I; 61.1 80 0.0027 27.1 11.3 32 92-125 23-54 (273)
149 4iiu_A 3-oxoacyl-[acyl-carrier 61.1 78 0.0027 27.0 12.3 55 92-154 28-82 (267)
150 3gdg_A Probable NADP-dependent 61.0 72 0.0025 27.1 10.7 35 92-126 21-56 (267)
151 3l77_A Short-chain alcohol deh 61.0 55 0.0019 27.2 9.8 31 93-125 5-35 (235)
152 3k31_A Enoyl-(acyl-carrier-pro 60.9 74 0.0025 27.9 10.9 35 90-125 30-65 (296)
153 3tsc_A Putative oxidoreductase 60.9 81 0.0028 27.1 13.6 32 92-125 13-44 (277)
154 1geg_A Acetoin reductase; SDR 60.6 77 0.0026 26.8 11.3 30 93-124 5-34 (256)
155 1piw_A Hypothetical zinc-type 60.3 18 0.00062 32.9 6.9 48 92-152 181-228 (360)
156 4dry_A 3-oxoacyl-[acyl-carrier 60.2 56 0.0019 28.5 9.9 33 90-124 33-65 (281)
157 1u7z_A Coenzyme A biosynthesis 59.7 12 0.00041 32.6 5.2 36 90-125 8-57 (226)
158 3irv_A Cysteine hydrolase; str 59.3 11 0.00037 32.7 4.9 65 87-152 135-209 (233)
159 3goh_A Alcohol dehydrogenase, 59.1 15 0.0005 32.8 5.9 47 92-152 144-190 (315)
160 2qq5_A DHRS1, dehydrogenase/re 59.0 71 0.0024 27.2 10.2 30 93-124 8-37 (260)
161 1nba_A N-carbamoylsarcosine am 59.0 15 0.00051 32.6 5.8 62 87-151 160-222 (264)
162 3u9l_A 3-oxoacyl-[acyl-carrier 58.9 1E+02 0.0034 27.6 13.1 32 93-126 8-39 (324)
163 3qlj_A Short chain dehydrogena 58.9 79 0.0027 28.0 10.9 32 92-125 29-60 (322)
164 3rih_A Short chain dehydrogena 58.8 72 0.0025 28.1 10.5 31 93-125 44-74 (293)
165 3svt_A Short-chain type dehydr 58.7 83 0.0029 27.1 10.8 31 92-124 13-43 (281)
166 1xkq_A Short-chain reductase f 58.7 71 0.0024 27.5 10.3 30 93-124 9-38 (280)
167 1vl8_A Gluconate 5-dehydrogena 58.6 88 0.003 26.8 11.4 31 93-125 24-54 (267)
168 4ej6_A Putative zinc-binding d 58.5 23 0.00079 32.5 7.3 49 92-152 184-232 (370)
169 3egc_A Putative ribose operon 58.5 85 0.0029 26.7 17.0 36 215-252 185-224 (291)
170 3qwb_A Probable quinone oxidor 58.3 20 0.00069 32.1 6.7 51 92-154 150-200 (334)
171 3afn_B Carbonyl reductase; alp 57.8 82 0.0028 26.3 10.7 31 93-125 10-40 (258)
172 3o74_A Fructose transport syst 57.8 83 0.0028 26.3 19.7 46 200-252 169-217 (272)
173 3grk_A Enoyl-(acyl-carrier-pro 57.8 53 0.0018 28.8 9.4 34 90-125 31-66 (293)
174 2b34_A F35G2.2, MAR1 ribonucle 57.8 9.9 0.00034 32.1 4.2 65 84-152 95-160 (199)
175 3ioy_A Short-chain dehydrogena 57.6 62 0.0021 28.8 9.9 32 92-125 10-41 (319)
176 2h3h_A Sugar ABC transporter, 57.5 94 0.0032 26.8 14.6 159 80-252 47-218 (313)
177 3gk3_A Acetoacetyl-COA reducta 57.4 91 0.0031 26.6 12.0 29 93-123 28-56 (269)
178 4e21_A 6-phosphogluconate dehy 57.4 1.2E+02 0.004 27.9 12.4 29 93-123 24-52 (358)
179 1t57_A Conserved protein MTH16 57.3 41 0.0014 28.8 7.9 78 74-155 35-113 (206)
180 3s2e_A Zinc-containing alcohol 57.2 17 0.00059 32.7 6.1 49 92-153 168-216 (340)
181 1wma_A Carbonyl reductase [NAD 57.2 78 0.0027 26.6 10.2 32 93-125 6-38 (276)
182 4ibo_A Gluconate dehydrogenase 57.2 66 0.0023 27.8 9.8 29 92-122 28-56 (271)
183 3txy_A Isochorismatase family 57.1 9.5 0.00033 32.1 4.0 62 87-151 122-184 (199)
184 3fbg_A Putative arginate lyase 57.0 14 0.00049 33.4 5.5 50 92-153 152-201 (346)
185 1xhl_A Short-chain dehydrogena 57.0 82 0.0028 27.6 10.5 30 93-124 29-58 (297)
186 3qk7_A Transcriptional regulat 56.9 94 0.0032 26.6 17.8 37 215-253 186-226 (294)
187 1w6u_A 2,4-dienoyl-COA reducta 56.8 97 0.0033 26.7 11.0 31 93-125 29-59 (302)
188 4grd_A N5-CAIR mutase, phospho 56.8 26 0.00088 29.3 6.4 57 202-266 57-113 (173)
189 3tqh_A Quinone oxidoreductase; 56.6 18 0.0006 32.4 6.0 48 92-152 154-201 (321)
190 3i6i_A Putative leucoanthocyan 56.4 1.1E+02 0.0037 27.1 11.5 32 93-126 13-44 (346)
191 4gqb_A Protein arginine N-meth 56.1 7.1 0.00024 39.4 3.5 37 219-255 361-397 (637)
192 3dbi_A Sugar-binding transcrip 56.1 1E+02 0.0036 26.9 20.5 156 82-252 111-280 (338)
193 3okf_A 3-dehydroquinate syntha 56.0 61 0.0021 30.4 9.8 92 146-252 61-158 (390)
194 1xa0_A Putative NADPH dependen 55.8 23 0.00079 31.6 6.7 48 93-152 152-199 (328)
195 2g1u_A Hypothetical protein TM 55.8 15 0.00052 29.0 4.9 32 91-124 19-50 (155)
196 1e3j_A NADP(H)-dependent ketos 55.7 29 0.001 31.3 7.4 48 92-152 170-217 (352)
197 2q2v_A Beta-D-hydroxybutyrate 55.7 94 0.0032 26.3 11.2 51 93-154 7-57 (255)
198 3krt_A Crotonyl COA reductase; 55.6 16 0.00054 34.7 5.8 50 92-153 230-279 (456)
199 3l49_A ABC sugar (ribose) tran 55.2 96 0.0033 26.2 18.0 164 79-251 50-225 (291)
200 1iz0_A Quinone oxidoreductase; 55.2 22 0.00074 31.4 6.3 49 92-152 127-175 (302)
201 3tfo_A Putative 3-oxoacyl-(acy 55.0 71 0.0024 27.6 9.6 71 141-227 22-92 (264)
202 3jy6_A Transcriptional regulat 55.0 96 0.0033 26.2 16.8 156 80-252 53-219 (276)
203 3nyw_A Putative oxidoreductase 54.9 97 0.0033 26.3 10.4 31 92-124 9-39 (250)
204 1x1t_A D(-)-3-hydroxybutyrate 54.8 98 0.0033 26.2 11.0 30 93-124 7-36 (260)
205 4eyg_A Twin-arginine transloca 54.8 1.1E+02 0.0038 26.8 15.3 147 83-250 64-230 (368)
206 3kjx_A Transcriptional regulat 54.7 1.1E+02 0.0038 26.9 16.5 158 80-251 114-284 (344)
207 3brs_A Periplasmic binding pro 54.5 98 0.0034 26.1 12.1 161 79-253 54-227 (289)
208 3ezl_A Acetoacetyl-COA reducta 54.4 97 0.0033 26.0 10.4 54 93-154 16-69 (256)
209 3i1j_A Oxidoreductase, short c 54.4 94 0.0032 25.9 11.1 31 92-124 16-46 (247)
210 1h2b_A Alcohol dehydrogenase; 54.1 24 0.00081 32.2 6.5 48 92-152 188-236 (359)
211 3zv4_A CIS-2,3-dihydrobiphenyl 53.7 1.1E+02 0.0037 26.4 13.4 52 92-155 7-58 (281)
212 3bfj_A 1,3-propanediol oxidore 53.5 1E+02 0.0035 28.4 10.9 76 168-253 53-144 (387)
213 4a0s_A Octenoyl-COA reductase/ 53.5 17 0.00059 34.2 5.6 49 92-152 222-270 (447)
214 3i4f_A 3-oxoacyl-[acyl-carrier 53.4 90 0.0031 26.4 10.0 34 92-126 8-41 (264)
215 2b5w_A Glucose dehydrogenase; 53.4 49 0.0017 29.9 8.6 50 92-151 174-226 (357)
216 3jyn_A Quinone oxidoreductase; 53.3 17 0.0006 32.5 5.4 50 92-153 142-191 (325)
217 4dup_A Quinone oxidoreductase; 53.3 19 0.00065 32.7 5.7 50 92-153 169-218 (353)
218 1tt7_A YHFP; alcohol dehydroge 53.0 23 0.0008 31.6 6.2 48 93-152 153-200 (330)
219 2p91_A Enoyl-[acyl-carrier-pro 53.0 1.1E+02 0.0038 26.3 11.1 33 92-125 23-56 (285)
220 1uuf_A YAHK, zinc-type alcohol 52.9 30 0.001 31.6 7.1 48 92-152 196-243 (369)
221 3gms_A Putative NADPH:quinone 52.8 24 0.00084 31.7 6.4 50 92-153 146-195 (340)
222 3llv_A Exopolyphosphatase-rela 52.8 33 0.0011 26.2 6.4 29 93-123 8-36 (141)
223 3v2h_A D-beta-hydroxybutyrate 52.7 1.1E+02 0.0039 26.4 11.5 31 92-124 27-57 (281)
224 3ged_A Short-chain dehydrogena 52.6 78 0.0027 27.5 9.4 48 94-154 6-53 (247)
225 3uog_A Alcohol dehydrogenase; 52.5 21 0.0007 32.6 5.8 49 92-153 191-239 (363)
226 1usg_A Leucine-specific bindin 52.5 1.2E+02 0.004 26.4 17.5 153 83-256 62-232 (346)
227 2hq1_A Glucose/ribitol dehydro 52.5 1E+02 0.0034 25.6 12.0 29 93-123 8-36 (247)
228 3h7a_A Short chain dehydrogena 52.4 1.1E+02 0.0037 26.0 10.5 55 92-155 9-63 (252)
229 1mxh_A Pteridine reductase 2; 52.3 1.1E+02 0.0038 26.1 10.5 31 92-124 13-43 (276)
230 1o4v_A Phosphoribosylaminoimid 52.3 32 0.0011 28.9 6.4 58 202-267 58-115 (183)
231 1zsy_A Mitochondrial 2-enoyl t 52.2 27 0.00092 31.7 6.6 53 92-152 169-221 (357)
232 3i09_A Periplasmic branched-ch 52.2 1.3E+02 0.0043 26.7 13.2 146 83-249 63-229 (375)
233 2c07_A 3-oxoacyl-(acyl-carrier 52.1 92 0.0031 26.9 9.9 29 93-123 47-75 (285)
234 3lkb_A Probable branched-chain 51.6 1.3E+02 0.0045 26.7 14.5 152 81-255 65-236 (392)
235 3h75_A Periplasmic sugar-bindi 51.5 1.3E+02 0.0043 26.5 17.0 156 81-251 51-242 (350)
236 1pl8_A Human sorbitol dehydrog 51.5 35 0.0012 30.9 7.3 49 92-152 173-221 (356)
237 1xmp_A PURE, phosphoribosylami 51.5 27 0.00093 29.1 5.7 58 202-267 56-113 (170)
238 2dph_A Formaldehyde dismutase; 51.5 29 0.00098 32.1 6.7 47 92-151 187-234 (398)
239 2cfc_A 2-(R)-hydroxypropyl-COM 51.4 1E+02 0.0034 25.7 9.8 31 93-125 5-35 (250)
240 2dri_A D-ribose-binding protei 51.3 1.1E+02 0.0037 25.7 13.8 156 81-251 48-216 (271)
241 1rjw_A ADH-HT, alcohol dehydro 51.3 28 0.00094 31.4 6.5 47 92-151 166-212 (339)
242 3f1l_A Uncharacterized oxidore 51.2 1.1E+02 0.0038 25.8 10.3 33 90-124 12-44 (252)
243 3tb6_A Arabinose metabolism tr 50.9 1.1E+02 0.0038 25.8 18.7 33 217-251 202-238 (298)
244 2hcy_A Alcohol dehydrogenase 1 50.9 41 0.0014 30.3 7.6 49 92-152 171-219 (347)
245 1u11_A PURE (N5-carboxyaminoim 50.8 33 0.0011 28.8 6.2 58 202-267 66-123 (182)
246 3k9c_A Transcriptional regulat 50.6 1.2E+02 0.004 25.9 18.7 37 215-253 184-224 (289)
247 3tzq_B Short-chain type dehydr 50.6 1.2E+02 0.0041 26.0 12.0 32 92-125 13-44 (271)
248 3tox_A Short chain dehydrogena 50.4 80 0.0027 27.4 9.3 30 92-123 10-39 (280)
249 2cdc_A Glucose dehydrogenase g 50.3 27 0.00091 31.9 6.2 50 92-151 182-231 (366)
250 2b4q_A Rhamnolipids biosynthes 50.0 98 0.0034 26.7 9.8 30 92-123 31-60 (276)
251 3g85_A Transcriptional regulat 50.0 1.2E+02 0.004 25.7 12.5 34 215-250 187-224 (289)
252 3gyb_A Transcriptional regulat 50.0 1.1E+02 0.0039 25.6 15.1 148 83-251 53-213 (280)
253 1ja9_A 4HNR, 1,3,6,8-tetrahydr 49.9 1.2E+02 0.004 25.6 11.0 31 93-124 23-53 (274)
254 3trh_A Phosphoribosylaminoimid 49.9 31 0.0011 28.6 5.9 48 216-267 61-108 (169)
255 1rrm_A Lactaldehyde reductase; 49.9 66 0.0023 29.6 9.0 99 142-253 25-142 (386)
256 3kuu_A Phosphoribosylaminoimid 49.9 34 0.0012 28.6 6.1 58 202-267 57-114 (174)
257 4egf_A L-xylulose reductase; s 49.8 1.1E+02 0.0037 26.2 9.9 32 92-125 22-53 (266)
258 4fc7_A Peroxisomal 2,4-dienoyl 49.8 1.2E+02 0.0043 25.9 11.0 34 90-125 27-60 (277)
259 1jx6_A LUXP protein; protein-l 49.6 1.3E+02 0.0045 26.2 14.8 157 79-250 93-267 (342)
260 3rg8_A Phosphoribosylaminoimid 49.4 34 0.0012 28.1 6.0 47 216-267 58-104 (159)
261 3ip1_A Alcohol dehydrogenase, 49.3 28 0.00096 32.3 6.3 49 92-152 215-263 (404)
262 2pd4_A Enoyl-[acyl-carrier-pro 49.3 1.1E+02 0.0039 26.1 10.0 33 92-125 8-41 (275)
263 3ors_A N5-carboxyaminoimidazol 49.0 40 0.0014 27.8 6.4 58 202-267 48-105 (163)
264 2ioy_A Periplasmic sugar-bindi 49.0 1.2E+02 0.0042 25.6 15.5 158 81-251 48-217 (283)
265 1gu7_A Enoyl-[acyl-carrier-pro 49.0 30 0.001 31.3 6.4 53 92-152 169-221 (364)
266 3jv7_A ADH-A; dehydrogenase, n 48.6 35 0.0012 30.7 6.7 49 92-153 173-222 (345)
267 1yxm_A Pecra, peroxisomal tran 48.6 1.3E+02 0.0045 25.9 11.5 31 93-125 21-51 (303)
268 3fpc_A NADP-dependent alcohol 48.5 25 0.00086 31.8 5.7 49 92-152 168-216 (352)
269 4b7c_A Probable oxidoreductase 48.5 27 0.00092 31.3 5.9 49 92-152 151-200 (336)
270 3oow_A Phosphoribosylaminoimid 48.2 48 0.0017 27.4 6.7 47 216-266 60-106 (166)
271 3kke_A LACI family transcripti 47.8 1.3E+02 0.0046 25.7 20.0 35 215-251 196-234 (303)
272 1l7d_A Nicotinamide nucleotide 47.8 36 0.0012 31.5 6.7 47 92-151 173-219 (384)
273 3kvo_A Hydroxysteroid dehydrog 47.5 56 0.0019 29.7 7.9 61 92-154 47-107 (346)
274 2bd0_A Sepiapterin reductase; 47.4 1.2E+02 0.004 25.2 9.6 22 94-117 6-27 (244)
275 1e7w_A Pteridine reductase; di 47.4 1.4E+02 0.0048 25.9 10.5 30 92-123 11-40 (291)
276 1yzv_A Hypothetical protein; s 47.4 9.1 0.00031 32.6 2.3 62 87-151 106-171 (204)
277 3zen_D Fatty acid synthase; tr 47.3 3.4E+02 0.012 32.5 15.9 32 93-125 2139-2170(3089)
278 1fmc_A 7 alpha-hydroxysteroid 47.1 1.2E+02 0.0042 25.1 11.6 55 93-155 13-67 (255)
279 1xq1_A Putative tropinone redu 46.9 1.3E+02 0.0044 25.3 11.7 31 93-124 16-46 (266)
280 1p0f_A NADP-dependent alcohol 46.8 42 0.0014 30.6 7.0 49 92-152 193-241 (373)
281 3kkj_A Amine oxidase, flavin-c 46.7 21 0.00071 28.9 4.4 24 97-122 8-31 (336)
282 2qhx_A Pteridine reductase 1; 46.7 1.5E+02 0.0051 26.4 10.7 30 92-123 48-77 (328)
283 2h0a_A TTHA0807, transcription 46.6 1.3E+02 0.0044 25.2 13.2 36 215-252 179-218 (276)
284 3uko_A Alcohol dehydrogenase c 46.5 31 0.0011 31.6 6.0 49 92-152 195-243 (378)
285 2c0c_A Zinc binding alcohol de 46.5 26 0.00087 32.0 5.5 49 92-152 165-213 (362)
286 4imr_A 3-oxoacyl-(acyl-carrier 46.0 1.4E+02 0.0049 25.7 10.2 57 90-155 33-89 (275)
287 3oig_A Enoyl-[acyl-carrier-pro 45.8 1.4E+02 0.0047 25.3 11.1 32 92-125 9-42 (266)
288 1e3i_A Alcohol dehydrogenase, 45.7 49 0.0017 30.1 7.3 49 92-152 197-245 (376)
289 3lp6_A Phosphoribosylaminoimid 45.6 41 0.0014 28.1 6.0 46 217-266 63-108 (174)
290 1yb5_A Quinone oxidoreductase; 45.6 36 0.0012 30.9 6.3 49 92-152 172-220 (351)
291 1pqw_A Polyketide synthase; ro 45.5 32 0.0011 28.0 5.4 48 92-151 40-87 (198)
292 2vn8_A Reticulon-4-interacting 45.4 40 0.0014 30.7 6.7 48 92-152 185-232 (375)
293 4gwg_A 6-phosphogluconate dehy 45.1 1.3E+02 0.0045 28.9 10.5 23 102-124 13-35 (484)
294 3ctm_A Carbonyl reductase; alc 44.8 1.3E+02 0.0043 25.6 9.6 53 93-154 37-89 (279)
295 3n0w_A ABC branched chain amin 44.7 1.7E+02 0.0057 25.9 16.0 142 83-245 65-225 (379)
296 2j8z_A Quinone oxidoreductase; 44.7 32 0.0011 31.2 5.8 49 92-152 164-212 (354)
297 2fn9_A Ribose ABC transporter, 44.6 1.4E+02 0.0049 25.1 13.8 35 215-251 190-225 (290)
298 3gaz_A Alcohol dehydrogenase s 44.6 31 0.0011 31.1 5.7 46 92-150 152-197 (343)
299 3c85_A Putative glutathione-re 44.4 37 0.0013 27.3 5.6 30 93-124 41-71 (183)
300 2gdz_A NAD+-dependent 15-hydro 44.4 1.4E+02 0.0048 25.3 9.8 31 93-125 10-40 (267)
301 3r3s_A Oxidoreductase; structu 44.2 1.6E+02 0.0054 25.6 10.8 33 90-124 49-81 (294)
302 1vlj_A NADH-dependent butanol 44.1 1.5E+02 0.005 27.6 10.5 76 168-253 62-153 (407)
303 3e61_A Putative transcriptiona 44.0 1.4E+02 0.0048 24.9 15.9 34 216-251 177-214 (277)
304 1cdo_A Alcohol dehydrogenase; 44.0 57 0.0019 29.6 7.4 49 92-152 194-242 (374)
305 3e8x_A Putative NAD-dependent 43.9 62 0.0021 26.9 7.2 35 90-126 21-55 (236)
306 1spx_A Short-chain reductase f 43.7 1.1E+02 0.0037 26.1 9.0 31 93-125 9-39 (278)
307 3efb_A Probable SOR-operon reg 43.7 1.2E+02 0.004 26.5 9.2 85 180-271 28-120 (266)
308 2x9g_A PTR1, pteridine reducta 43.7 1.6E+02 0.0054 25.4 11.2 32 92-125 25-56 (288)
309 2ew8_A (S)-1-phenylethanol deh 43.0 1.5E+02 0.0051 24.9 12.2 50 93-154 10-60 (249)
310 2jhf_A Alcohol dehydrogenase E 42.9 58 0.002 29.6 7.3 49 92-152 193-241 (374)
311 1v3u_A Leukotriene B4 12- hydr 42.6 45 0.0015 29.7 6.4 49 92-152 147-195 (333)
312 3h7a_A Short chain dehydrogena 42.4 1E+02 0.0035 26.2 8.5 71 140-227 24-94 (252)
313 2h6e_A ADH-4, D-arabinose 1-de 42.3 30 0.001 31.2 5.2 48 92-152 172-221 (344)
314 2pd6_A Estradiol 17-beta-dehyd 42.3 1.5E+02 0.0052 24.8 9.6 31 93-125 10-40 (264)
315 3gxh_A Putative phosphatase (D 42.2 1.3E+02 0.0043 23.8 9.3 76 139-226 32-107 (157)
316 1jvb_A NAD(H)-dependent alcoho 42.0 42 0.0014 30.2 6.1 49 92-152 172-221 (347)
317 2wyu_A Enoyl-[acyl carrier pro 41.9 1.6E+02 0.0054 24.9 10.8 32 93-125 11-43 (261)
318 2d8a_A PH0655, probable L-thre 41.8 30 0.001 31.2 5.1 48 92-152 169-217 (348)
319 2j3h_A NADP-dependent oxidored 41.8 40 0.0014 30.2 5.9 49 92-152 157-206 (345)
320 1qsg_A Enoyl-[acyl-carrier-pro 41.5 1.5E+02 0.0051 25.1 9.5 32 93-125 12-44 (265)
321 3oqp_A Putative isochorismatas 41.3 40 0.0014 28.6 5.5 40 87-127 105-145 (211)
322 1qor_A Quinone oxidoreductase; 41.1 36 0.0012 30.3 5.5 49 92-152 142-190 (327)
323 2eih_A Alcohol dehydrogenase; 41.1 31 0.0011 31.0 5.1 48 92-151 168-215 (343)
324 3lqy_A Putative isochorismatas 41.1 41 0.0014 27.8 5.4 40 87-127 109-149 (190)
325 3a11_A Translation initiation 40.6 59 0.002 29.9 6.9 57 92-156 143-201 (338)
326 1c1d_A L-phenylalanine dehydro 40.6 93 0.0032 28.7 8.3 62 77-151 155-222 (355)
327 1vj0_A Alcohol dehydrogenase, 40.6 45 0.0015 30.6 6.2 48 92-152 197-245 (380)
328 1x13_A NAD(P) transhydrogenase 40.5 49 0.0017 31.0 6.4 47 92-151 173-219 (401)
329 3lf2_A Short chain oxidoreduct 40.4 1.7E+02 0.0058 24.8 11.5 31 92-124 10-40 (265)
330 2fqx_A Membrane lipoprotein TM 40.3 1.9E+02 0.0065 25.3 16.9 153 81-253 53-226 (318)
331 1f8f_A Benzyl alcohol dehydrog 40.1 43 0.0015 30.4 6.0 50 92-153 192-241 (371)
332 1wly_A CAAR, 2-haloacrylate re 39.9 32 0.0011 30.8 4.9 49 92-152 147-195 (333)
333 3mcw_A Putative hydrolase; iso 39.8 46 0.0016 27.8 5.6 40 87-127 109-149 (198)
334 1fmc_A 7 alpha-hydroxysteroid 39.8 1.6E+02 0.0055 24.4 9.9 70 142-227 30-99 (255)
335 3h5l_A Putative branched-chain 39.7 2.1E+02 0.0072 25.7 11.9 40 216-255 219-258 (419)
336 3t37_A Probable dehydrogenase; 39.6 17 0.00059 34.7 3.2 36 215-254 16-52 (526)
337 3ru6_A Orotidine 5'-phosphate 39.6 1.2E+02 0.0041 27.4 8.7 83 83-174 164-250 (303)
338 2q5c_A NTRC family transcripti 39.4 41 0.0014 28.2 5.2 39 79-125 131-169 (196)
339 2cf5_A Atccad5, CAD, cinnamyl 39.4 59 0.002 29.4 6.7 48 92-152 182-230 (357)
340 3o26_A Salutaridine reductase; 39.3 1.8E+02 0.0062 24.8 15.2 35 90-126 12-46 (311)
341 3ve9_A Orotidine-5'-phosphate 39.2 1.1E+02 0.0038 26.0 8.1 62 83-156 121-182 (215)
342 2fzw_A Alcohol dehydrogenase c 39.1 56 0.0019 29.6 6.5 49 92-152 192-240 (373)
343 1yqd_A Sinapyl alcohol dehydro 38.9 74 0.0025 28.8 7.4 48 92-152 189-237 (366)
344 3e3m_A Transcriptional regulat 38.9 2E+02 0.0069 25.3 18.3 34 215-250 249-286 (355)
345 1edo_A Beta-keto acyl carrier 38.6 1.6E+02 0.0056 24.2 11.2 29 94-123 4-32 (244)
346 2zb4_A Prostaglandin reductase 38.5 55 0.0019 29.5 6.4 49 92-152 162-212 (357)
347 4h17_A Hydrolase, isochorismat 38.2 49 0.0017 27.6 5.5 40 87-127 119-159 (197)
348 3ic5_A Putative saccharopine d 37.7 69 0.0024 23.0 5.8 30 93-124 7-37 (118)
349 3o26_A Salutaridine reductase; 37.7 1.8E+02 0.0062 24.8 9.5 72 140-227 29-102 (311)
350 3kzv_A Uncharacterized oxidore 37.3 1.9E+02 0.0064 24.4 10.3 27 93-121 5-31 (254)
351 3f4w_A Putative hexulose 6 pho 37.2 89 0.003 25.7 7.1 68 80-155 67-135 (211)
352 4ffl_A PYLC; amino acid, biosy 37.2 35 0.0012 30.9 4.8 32 92-125 2-33 (363)
353 4dvj_A Putative zinc-dependent 37.2 44 0.0015 30.5 5.4 48 93-152 174-222 (363)
354 2pnf_A 3-oxoacyl-[acyl-carrier 37.0 1.8E+02 0.006 24.0 10.3 31 93-124 9-39 (248)
355 4ekn_B Aspartate carbamoyltran 36.7 67 0.0023 29.1 6.5 58 92-155 152-211 (306)
356 3rwb_A TPLDH, pyridoxal 4-dehy 36.5 1.9E+02 0.0065 24.2 10.8 52 92-155 8-59 (247)
357 2zat_A Dehydrogenase/reductase 36.5 1.9E+02 0.0065 24.3 10.1 31 93-125 17-47 (260)
358 1vp8_A Hypothetical protein AF 36.4 1.1E+02 0.0036 26.1 7.2 77 181-271 18-99 (201)
359 2bm8_A Cephalosporin hydroxyla 36.4 46 0.0016 28.3 5.2 38 218-255 84-121 (236)
360 2x7x_A Sensor protein; transfe 36.3 2.1E+02 0.0072 24.7 15.2 161 80-253 52-225 (325)
361 2ph3_A 3-oxoacyl-[acyl carrier 36.2 1.8E+02 0.0061 23.9 12.1 29 94-123 4-32 (245)
362 2okg_A Central glycolytic gene 36.0 1.7E+02 0.0059 25.2 9.0 53 219-271 57-114 (255)
363 1xu9_A Corticosteroid 11-beta- 35.9 2.1E+02 0.0071 24.5 10.5 32 92-125 30-61 (286)
364 4dyv_A Short-chain dehydrogena 35.9 2.1E+02 0.0071 24.6 9.6 30 92-123 30-59 (272)
365 3d4o_A Dipicolinate synthase s 35.2 73 0.0025 28.0 6.5 64 74-150 133-201 (293)
366 2ywl_A Thioredoxin reductase r 35.2 53 0.0018 26.0 5.2 31 94-126 4-34 (180)
367 2cul_A Glucose-inhibited divis 34.5 40 0.0014 28.4 4.4 31 92-125 5-35 (232)
368 4g81_D Putative hexonate dehyd 34.3 1.3E+02 0.0045 26.1 7.9 50 71-123 15-64 (255)
369 2ae2_A Protein (tropinone redu 34.2 2.1E+02 0.0071 24.0 9.4 71 140-225 26-96 (260)
370 3kl2_A Putative isochorismatas 34.2 61 0.0021 27.6 5.6 40 87-127 147-187 (226)
371 2gru_A 2-deoxy-scyllo-inosose 34.0 2.2E+02 0.0077 25.9 9.9 91 147-251 34-128 (368)
372 1xah_A Sadhqs, 3-dehydroquinat 34.0 61 0.0021 29.6 5.9 48 200-253 75-126 (354)
373 4fe7_A Xylose operon regulator 33.9 1.1E+02 0.0037 28.0 7.7 157 83-253 69-242 (412)
374 3grp_A 3-oxoacyl-(acyl carrier 33.7 2.2E+02 0.0076 24.2 10.9 52 92-155 29-80 (266)
375 3rss_A Putative uncharacterize 33.7 74 0.0025 30.9 6.7 54 92-151 54-110 (502)
376 3zu3_A Putative reductase YPO4 33.7 3.1E+02 0.01 25.8 11.4 98 93-227 50-148 (405)
377 3qvp_A Glucose oxidase; oxidor 33.6 21 0.00073 35.3 2.8 35 215-253 18-53 (583)
378 2zat_A Dehydrogenase/reductase 33.6 2.1E+02 0.0073 23.9 11.4 12 242-253 185-196 (260)
379 4e6p_A Probable sorbitol dehyd 33.4 2.1E+02 0.0071 24.1 9.0 30 92-123 10-39 (259)
380 4dbe_A Orotidine 5'-phosphate 32.9 1.2E+02 0.0042 25.8 7.4 17 106-122 125-141 (222)
381 3ox4_A Alcohol dehydrogenase 2 32.8 80 0.0027 29.2 6.5 77 167-253 48-140 (383)
382 2a67_A Isochorismatase family 32.7 53 0.0018 26.4 4.7 39 87-126 97-136 (167)
383 3icc_A Putative 3-oxoacyl-(acy 32.3 1.3E+02 0.0046 25.0 7.6 55 93-155 10-64 (255)
384 3tfx_A Orotidine 5'-phosphate 32.2 1.2E+02 0.0042 26.6 7.4 87 81-174 148-236 (259)
385 3m6i_A L-arabinitol 4-dehydrog 32.0 67 0.0023 28.9 5.8 49 92-152 181-229 (363)
386 2rir_A Dipicolinate synthase, 32.0 89 0.003 27.5 6.5 31 92-124 158-188 (300)
387 3rwb_A TPLDH, pyridoxal 4-dehy 31.9 2.3E+02 0.0077 23.7 9.6 69 140-227 23-91 (247)
388 3n74_A 3-ketoacyl-(acyl-carrie 31.6 83 0.0028 26.6 6.1 52 92-155 11-62 (261)
389 2wm3_A NMRA-like family domain 31.6 2.4E+02 0.0083 24.0 11.9 51 93-153 7-58 (299)
390 3o21_A Glutamate receptor 3; p 31.5 2.9E+02 0.0098 24.8 12.1 34 85-120 64-97 (389)
391 2r6j_A Eugenol synthase 1; phe 31.2 1.1E+02 0.0037 26.6 6.9 32 93-126 14-45 (318)
392 3oj0_A Glutr, glutamyl-tRNA re 31.1 74 0.0025 24.4 5.2 30 91-123 21-50 (144)
393 4ei7_A Plasmid replication pro 30.9 73 0.0025 29.8 5.9 69 216-286 111-188 (389)
394 2gnp_A Transcriptional regulat 30.8 2E+02 0.0069 24.9 8.6 49 221-271 60-115 (266)
395 1pvv_A Otcase, ornithine carba 30.7 1.4E+02 0.0047 27.1 7.6 34 93-127 157-190 (315)
396 3h5o_A Transcriptional regulat 30.7 2.7E+02 0.0092 24.2 18.5 35 215-251 238-276 (339)
397 4eqs_A Coenzyme A disulfide re 30.5 2.4E+02 0.0081 26.1 9.6 60 91-152 147-207 (437)
398 3miz_A Putative transcriptiona 30.4 2.5E+02 0.0085 23.8 14.0 35 215-251 196-234 (301)
399 2z1n_A Dehydrogenase; reductas 30.4 2.4E+02 0.0083 23.6 10.7 30 93-124 10-39 (260)
400 3grp_A 3-oxoacyl-(acyl carrier 30.3 2.5E+02 0.0087 23.8 9.4 69 140-227 44-112 (266)
401 3rku_A Oxidoreductase YMR226C; 30.3 1.3E+02 0.0044 26.2 7.2 33 89-123 32-67 (287)
402 2rjo_A Twin-arginine transloca 30.3 2.7E+02 0.0091 24.1 13.8 159 81-251 52-232 (332)
403 3hs3_A Ribose operon repressor 30.1 1.6E+02 0.0056 24.8 7.8 35 216-252 178-216 (277)
404 4eez_A Alcohol dehydrogenase 1 30.1 1.7E+02 0.0058 25.8 8.2 50 92-154 165-215 (348)
405 3n74_A 3-ketoacyl-(acyl-carrie 30.0 2.4E+02 0.0083 23.5 9.6 70 140-228 26-95 (261)
406 2hqb_A Transcriptional activat 29.9 75 0.0026 27.7 5.6 33 216-252 181-213 (296)
407 4egf_A L-xylulose reductase; s 29.8 90 0.0031 26.7 6.1 12 242-253 192-203 (266)
408 4e1o_A HDC, histidine decarbox 29.7 1.7E+02 0.0057 27.5 8.4 55 93-155 148-217 (481)
409 3p2y_A Alanine dehydrogenase/p 29.7 85 0.0029 29.4 6.1 48 92-152 185-232 (381)
410 3ecs_A Translation initiation 29.6 94 0.0032 28.3 6.3 57 92-156 123-181 (315)
411 4hb9_A Similarities with proba 29.6 53 0.0018 29.4 4.6 28 93-122 3-30 (412)
412 3ce6_A Adenosylhomocysteinase; 29.4 79 0.0027 30.6 6.0 46 92-150 275-320 (494)
413 3ged_A Short-chain dehydrogena 29.4 2.7E+02 0.0093 23.9 14.9 15 239-253 163-177 (247)
414 1jzt_A Hypothetical 27.5 kDa p 29.3 1.1E+02 0.0036 26.7 6.4 54 93-151 61-117 (246)
415 4eue_A Putative reductase CA_C 29.3 3E+02 0.01 25.8 10.0 44 175-227 119-162 (418)
416 4a5l_A Thioredoxin reductase; 29.1 46 0.0016 28.8 4.0 28 94-123 7-34 (314)
417 3dii_A Short-chain dehydrogena 29.0 2.5E+02 0.0086 23.4 9.5 28 93-122 5-32 (247)
418 3k7y_A Aspartate aminotransfer 29.0 1.8E+02 0.0061 26.8 8.3 49 94-155 101-151 (405)
419 3i45_A Twin-arginine transloca 29.0 3E+02 0.01 24.3 13.1 148 83-251 65-235 (387)
420 4hp8_A 2-deoxy-D-gluconate 3-d 29.0 1.1E+02 0.0039 26.5 6.5 55 90-155 9-63 (247)
421 1gee_A Glucose 1-dehydrogenase 28.9 2.5E+02 0.0085 23.3 9.6 70 140-225 24-94 (261)
422 3q9t_A Choline dehydrogenase a 28.9 28 0.00097 34.3 2.8 36 215-254 5-41 (577)
423 4dqx_A Probable oxidoreductase 28.8 2.8E+02 0.0094 23.8 9.6 69 140-227 44-112 (277)
424 2pju_A Propionate catabolism o 28.4 68 0.0023 27.6 4.9 37 79-123 143-179 (225)
425 4ibo_A Gluconate dehydrogenase 28.4 1.3E+02 0.0044 25.9 6.8 12 242-253 196-207 (271)
426 3gvc_A Oxidoreductase, probabl 28.3 2.8E+02 0.0097 23.7 10.4 34 90-125 29-62 (277)
427 3csu_A Protein (aspartate carb 28.2 1E+02 0.0034 28.0 6.1 56 93-154 156-213 (310)
428 3dme_A Conserved exported prot 28.2 60 0.002 28.6 4.7 30 94-125 7-36 (369)
429 3orq_A N5-carboxyaminoimidazol 28.2 72 0.0025 29.2 5.3 32 92-125 13-44 (377)
430 3gvc_A Oxidoreductase, probabl 28.2 2.8E+02 0.0097 23.7 9.5 69 140-227 46-114 (277)
431 3zv4_A CIS-2,3-dihydrobiphenyl 28.1 2.6E+02 0.0091 23.9 8.9 68 140-226 22-89 (281)
432 1vb5_A Translation initiation 28.1 1.3E+02 0.0045 26.5 6.9 57 92-156 111-169 (276)
433 2oln_A NIKD protein; flavoprot 28.0 55 0.0019 29.6 4.4 29 94-124 7-35 (397)
434 3oz2_A Digeranylgeranylglycero 28.0 56 0.0019 29.0 4.4 29 92-123 6-34 (397)
435 3k40_A Aromatic-L-amino-acid d 28.0 1.4E+02 0.0049 28.0 7.6 55 93-155 142-211 (475)
436 1zk4_A R-specific alcohol dehy 28.0 2.5E+02 0.0087 23.1 10.2 31 93-124 8-38 (251)
437 4gcm_A TRXR, thioredoxin reduc 27.9 58 0.002 28.3 4.4 28 92-122 8-35 (312)
438 3jvd_A Transcriptional regulat 27.8 2.7E+02 0.0091 24.3 9.0 34 217-252 232-269 (333)
439 1o98_A 2,3-bisphosphoglycerate 27.8 1E+02 0.0035 30.0 6.5 51 77-127 95-154 (511)
440 1duv_G Octase-1, ornithine tra 27.8 1.4E+02 0.0049 27.3 7.2 56 93-154 157-216 (333)
441 3kvo_A Hydroxysteroid dehydrog 27.8 3.3E+02 0.011 24.4 16.7 14 240-253 221-234 (346)
442 3s99_A Basic membrane lipoprot 27.6 3.5E+02 0.012 24.5 13.2 150 80-254 76-240 (356)
443 3d3j_A Enhancer of mRNA-decapp 27.5 1.4E+02 0.0049 26.8 7.1 53 93-150 135-190 (306)
444 4gek_A TRNA (CMO5U34)-methyltr 27.5 1.1E+02 0.0037 26.5 6.1 34 219-254 74-107 (261)
445 3kv1_A Transcriptional repress 27.4 1.6E+02 0.0054 25.7 7.2 51 220-271 57-113 (267)
446 2a0u_A Initiation factor 2B; S 27.3 1.4E+02 0.0047 27.9 7.1 59 92-156 179-246 (383)
447 3tpc_A Short chain alcohol deh 27.3 2.7E+02 0.0093 23.2 12.0 33 92-126 9-41 (257)
448 4fk1_A Putative thioredoxin re 27.1 61 0.0021 28.2 4.4 29 92-123 8-36 (304)
449 1dxh_A Ornithine carbamoyltran 27.1 1.4E+02 0.0048 27.3 7.0 35 93-127 157-191 (335)
450 3ntd_A FAD-dependent pyridine 27.0 2.5E+02 0.0085 26.6 9.2 35 91-127 151-185 (565)
451 3q2o_A Phosphoribosylaminoimid 26.9 75 0.0026 29.0 5.2 31 93-125 16-46 (389)
452 4dio_A NAD(P) transhydrogenase 26.8 1.2E+02 0.0042 28.5 6.7 49 92-153 191-239 (405)
453 3uf0_A Short-chain dehydrogena 26.5 3E+02 0.01 23.4 9.2 54 92-155 33-86 (273)
454 4eso_A Putative oxidoreductase 26.4 93 0.0032 26.4 5.5 34 90-125 8-41 (255)
455 3alj_A 2-methyl-3-hydroxypyrid 26.4 65 0.0022 29.0 4.6 31 93-125 13-43 (379)
456 1sny_A Sniffer CG10964-PA; alp 26.4 2.8E+02 0.0096 23.1 12.8 32 93-126 24-58 (267)
457 1vlv_A Otcase, ornithine carba 26.2 1.5E+02 0.005 27.1 6.9 35 93-127 169-203 (325)
458 1sg6_A Pentafunctional AROM po 26.1 2.1E+02 0.0071 26.4 8.2 75 166-251 51-139 (393)
459 2i6u_A Otcase, ornithine carba 26.0 1.7E+02 0.0057 26.5 7.2 35 93-127 150-184 (307)
460 2e4u_A Metabotropic glutamate 26.0 3.3E+02 0.011 25.8 9.9 139 97-251 122-278 (555)
461 2x3n_A Probable FAD-dependent 25.8 68 0.0023 29.0 4.7 30 94-125 9-38 (399)
462 1jye_A Lactose operon represso 25.8 1.9E+02 0.0065 25.4 7.7 37 215-253 237-277 (349)
463 3rp8_A Flavoprotein monooxygen 25.8 67 0.0023 29.2 4.6 30 94-125 26-55 (407)
464 3m1a_A Putative dehydrogenase; 25.7 3E+02 0.01 23.2 13.4 50 93-154 8-57 (281)
465 3fim_B ARYL-alcohol oxidase; A 25.5 38 0.0013 33.3 3.0 36 216-255 2-38 (566)
466 1yvv_A Amine oxidase, flavin-c 25.4 67 0.0023 28.0 4.4 28 94-123 5-32 (336)
467 4dgk_A Phytoene dehydrogenase; 25.3 60 0.0021 30.4 4.3 28 93-122 3-30 (501)
468 2bon_A Lipid kinase; DAG kinas 25.3 2.7E+02 0.0093 24.8 8.6 38 217-256 83-122 (332)
469 3ka7_A Oxidoreductase; structu 25.2 75 0.0026 28.9 4.9 28 94-123 3-30 (425)
470 3r6d_A NAD-dependent epimerase 25.2 2.7E+02 0.0092 22.4 10.3 31 94-125 8-39 (221)
471 3guy_A Short-chain dehydrogena 25.1 2.8E+02 0.0096 22.6 9.3 31 93-125 4-34 (230)
472 1ryi_A Glycine oxidase; flavop 25.1 72 0.0025 28.4 4.7 30 94-125 20-49 (382)
473 3ldv_A Orotidine 5'-phosphate 25.1 3E+02 0.01 23.9 8.6 71 82-159 167-239 (255)
474 4at0_A 3-ketosteroid-delta4-5a 24.9 64 0.0022 30.8 4.4 29 92-123 43-71 (510)
475 4e12_A Diketoreductase; oxidor 24.8 80 0.0027 27.5 4.8 30 92-123 5-34 (283)
476 1ml4_A Aspartate transcarbamoy 24.5 1.1E+02 0.0036 27.8 5.6 56 93-154 157-213 (308)
477 1t5o_A EIF2BD, translation ini 24.5 2.1E+02 0.0071 26.4 7.7 59 92-156 148-215 (351)
478 3r3s_A Oxidoreductase; structu 24.5 1.2E+02 0.0042 26.3 6.0 12 242-253 220-231 (294)
479 3fbs_A Oxidoreductase; structu 24.5 80 0.0027 26.7 4.7 29 94-124 5-33 (297)
480 2r5f_A Transcriptional regulat 24.4 1.4E+02 0.0047 26.0 6.3 49 221-271 60-117 (264)
481 3uf0_A Short-chain dehydrogena 24.3 3.3E+02 0.011 23.2 13.3 49 71-123 37-85 (273)
482 3tr2_A Orotidine 5'-phosphate 24.2 2E+02 0.0068 24.8 7.2 71 82-159 149-221 (239)
483 3cgv_A Geranylgeranyl reductas 24.2 77 0.0026 28.3 4.7 30 94-125 7-36 (397)
484 1yo6_A Putative carbonyl reduc 24.0 2.9E+02 0.0098 22.5 8.1 31 94-125 6-38 (250)
485 3nix_A Flavoprotein/dehydrogen 23.9 69 0.0024 29.1 4.3 30 94-125 8-37 (421)
486 4imr_A 3-oxoacyl-(acyl-carrier 23.7 3.4E+02 0.012 23.1 9.3 70 140-226 50-119 (275)
487 3tzq_B Short-chain type dehydr 23.7 2.8E+02 0.0097 23.5 8.2 69 140-227 28-96 (271)
488 3nkl_A UDP-D-quinovosamine 4-d 23.6 2.3E+02 0.008 21.2 9.5 34 92-127 5-39 (141)
489 2h7i_A Enoyl-[acyl-carrier-pro 23.5 1.3E+02 0.0043 25.7 5.8 32 93-125 10-42 (269)
490 2py6_A Methyltransferase FKBM; 23.4 43 0.0015 31.4 2.8 48 76-127 39-86 (409)
491 4ea9_A Perosamine N-acetyltran 23.4 1E+02 0.0035 25.6 5.0 34 92-127 13-46 (220)
492 3h5t_A Transcriptional regulat 23.3 3.8E+02 0.013 23.5 16.9 44 200-251 258-305 (366)
493 3ew7_A LMO0794 protein; Q8Y8U8 23.3 1.2E+02 0.004 24.5 5.3 32 94-126 3-34 (221)
494 1k0i_A P-hydroxybenzoate hydro 23.2 68 0.0023 28.9 4.1 29 94-124 5-33 (394)
495 2czd_A Orotidine 5'-phosphate 23.2 2.6E+02 0.009 23.0 7.6 65 81-156 123-187 (208)
496 4a8t_A Putrescine carbamoyltra 23.2 93 0.0032 28.6 5.0 35 92-127 176-210 (339)
497 2vou_A 2,6-dihydroxypyridine h 23.2 81 0.0028 28.6 4.6 31 93-125 7-37 (397)
498 3lzw_A Ferredoxin--NADP reduct 23.2 86 0.0029 27.0 4.7 30 94-125 10-39 (332)
499 3tox_A Short chain dehydrogena 23.1 78 0.0027 27.5 4.4 12 242-253 180-191 (280)
500 1t9k_A Probable methylthioribo 23.1 2E+02 0.007 26.3 7.3 59 92-156 150-217 (347)
No 1
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=8.3e-46 Score=349.36 Aligned_cols=252 Identities=37% Similarity=0.577 Sum_probs=209.8
Q ss_pred CCCchhhhcCCCCccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEe
Q 021545 24 APPSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITI 97 (311)
Q Consensus 24 ~~p~w~~~l~~~p~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~ 97 (311)
+||.|+..|..++ ++.+..++|||++ +++|++ |+||||++++.+||||+|++.+++.+|+++|.++||++
T Consensus 1 ~~~~~~~~l~~~~--~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~~~vv~~ 76 (325)
T 1j0a_A 1 MHPKIFALLAKFP--RVELIPWETPIQY--LPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITV 76 (325)
T ss_dssp CCHHHHHHHTTCC--CCCCCCSCCCEEE--CHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCchhhhhhccCC--CcccccCCCCceE--hhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 6999999999998 6888999999999 665542 78999999865799999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHcCCcEEEEEcCCC-cccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHH
Q 021545 98 GGIQSNHCRAAAVAAKYLNLDCYLILRTSK-VLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLK 176 (311)
Q Consensus 98 g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~-~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~ 176 (311)
|+|+||||+|+|++|+.+|++|++|||+.. + .+|+.+++++||+|+.++.. ++.. ..+...+.++++++
T Consensus 77 G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~v~~~~~~-~~~~-~~~~~~~~a~~l~~ 146 (325)
T 1j0a_A 77 GAVHSNHAFVTGLAAKKLGLDAILVLRGKEEL--------KGNYLLDKIMGIETRVYDAK-DSFE-LMKYAEEIAEELKR 146 (325)
T ss_dssp CCTTCHHHHHHHHHHHHTTCEEEEEEESCCCS--------CHHHHHHHHTTCEEEEESCC-STTT-HHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHHhCCcEEEEECCCCCC--------CchHHHHHHCCCEEEEeCcc-hhhh-hhHHHHHHHHHHHH
Confidence 889999999999999999999999999987 4 36899999999999999874 3210 00112334556766
Q ss_pred cCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCch
Q 021545 177 EGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD 256 (311)
Q Consensus 177 ~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~ 256 (311)
+.+..|++|+|+.|+.+.+||.+++.||++|++ ..+|+||+|+|||||++|++.++++.++++|||||++.+++.
T Consensus 147 ~~~~~~~~p~~~~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~ 221 (325)
T 1j0a_A 147 EGRKPYVIPPGGASPIGTLGYVRAVGEIATQSE-----VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGE 221 (325)
T ss_dssp SSCCEEEECGGGCSHHHHTHHHHHHHHHHHHCC-----CCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSS
T ss_pred cCCceEEEcCCCCCHHHHHHHHHHHHHHHHhhC-----CCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchH
Confidence 665678999999999999999999999999984 469999999999999999999999999999999999999988
Q ss_pred hhHHHHHHhHh----hhCC---------CCCCCCeEEeccCCccchHHHHHH
Q 021545 257 YFYDYTQGLLD----GLNA---------GVDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 257 ~~~~~i~~~~~----g~~~---------~~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+....+.++.+ +++. ....|+ +.|+|.+.+..+..+..
T Consensus 222 ~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~ 272 (325)
T 1j0a_A 222 VMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGT 272 (325)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHH
Confidence 77666554444 3442 123577 88888887777766653
No 2
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=1.4e-43 Score=336.74 Aligned_cols=256 Identities=33% Similarity=0.442 Sum_probs=208.4
Q ss_pred hhhcCCCCccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccc
Q 021545 29 ASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQS 102 (311)
Q Consensus 29 ~~~l~~~p~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~G 102 (311)
...+...+ |+.+.+++|||++ +++|++ |+||||++++.+||||+|++.+++.+|+++|.++||++||++|
T Consensus 17 ~~~~~a~~--ri~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsG 92 (342)
T 4d9b_A 17 LHHLTRFP--RLEFIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQS 92 (342)
T ss_dssp TGGGGGSC--CCCSSCSCCCEEE--CHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTC
T ss_pred cchhccCC--cccccCCCCceeE--hhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCccc
Confidence 33455556 7889999999999 666542 8999999997679999999999999999999999999887899
Q ss_pred hHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcE
Q 021545 103 NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPY 182 (311)
Q Consensus 103 Nhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y 182 (311)
|||+|+|++|+++|++|++|||+..+..+..+...+|+.++++|||+|+.++.. ++ ..+.+++++++++++++..|
T Consensus 93 N~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~-~~---~~~~~~~~a~~l~~~~~~~~ 168 (342)
T 4d9b_A 93 NHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDAL-TD---PDAQLQTLATRIEAQGFRPY 168 (342)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCC-SS---HHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECch-hh---HHHHHHHHHHHHHhcCCceE
Confidence 999999999999999999999998753210000136899999999999999874 21 22334455667777776789
Q ss_pred EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHH
Q 021545 183 VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYT 262 (311)
Q Consensus 183 ~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i 262 (311)
++|++++|+.+..||.+++.||++|++.. ..+|+||+|+|||||++|++.++++.++++|||||++.+++.+....+
T Consensus 169 ~~p~~~~n~~~~~G~~t~~~EI~~q~~~~---~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~ 245 (342)
T 4d9b_A 169 VIPVGGSSALGAMGYVESALEIAQQCEEV---VGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKV 245 (342)
T ss_dssp ECCGGGCSHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHH
T ss_pred EeCCCCCChHHHHHHHHHHHHHHHHHhcc---CCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHH
Confidence 99999999999999999999999998621 369999999999999999999999999999999999999987765443
Q ss_pred ----HHhHhhhCCC---------CCCCCeEEeccCCccchHHHHHH
Q 021545 263 ----QGLLDGLNAG---------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 263 ----~~~~~g~~~~---------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
..++++++.+ ...|+++.|+|.+++..+..+..
T Consensus 246 ~~~~~t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 291 (342)
T 4d9b_A 246 IALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLAS 291 (342)
T ss_dssp HHHHHHHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHH
Confidence 3455677651 33688999999988887777654
No 3
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.9e-41 Score=319.39 Aligned_cols=256 Identities=26% Similarity=0.354 Sum_probs=202.2
Q ss_pred cCCCCccccccCCCCCCccccCCCCC-----C--C-CCCCCCCC-CCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccc
Q 021545 32 LAPIPSHVFSLGHFPTPIHKWNLPNL-----P--H-NTERDDLS-GMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQS 102 (311)
Q Consensus 32 l~~~p~~~~~~~~~~TPL~~~~~~~L-----s--~-~vKRedl~-~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~G 102 (311)
|..+| ++.+..++|||++ +++| . + |+||||+| ++.+||||+|++.++|.+|+++|.++||++|+|+|
T Consensus 3 l~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~~~vv~~G~ssG 78 (341)
T 1f2d_A 3 VAKFA--KYPLTFGPSPISN--LNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQS 78 (341)
T ss_dssp TTSSC--CCCCSSSSCCEEE--CHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCSEEEEEEETTC
T ss_pred cccCC--CcccCCCCCccee--HHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCcch
Confidence 45556 6888999999999 4433 2 2 78999997 87789999999999999999999999999989999
Q ss_pred hHHHHHHHHHHHcCCcEEEEEcCCCc-cc--CCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCC
Q 021545 103 NHCRAAAVAAKYLNLDCYLILRTSKV-LV--DQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR 179 (311)
Q Consensus 103 Nhg~AlA~~a~~~Gl~~~ivv~~~~~-~~--~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~ 179 (311)
|||+|+|++|+.+|++|++|||+..+ .. .+.+...+|+.+++++||+|+.++...+.. .. +...+.+++++++++
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~-~~-~~~~~~a~~l~~~~~ 156 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIG-MR-KSFANALQELEDAGH 156 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSS-CC-HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchh-HH-HHHHHHHHHHHhcCC
Confidence 99999999999999999999999875 10 010112469999999999999998743311 00 122344566777665
Q ss_pred CcEEecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhh
Q 021545 180 RPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF 258 (311)
Q Consensus 180 ~~y~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~ 258 (311)
+.|++|.+ ++|+.+..||.+++.||++|+.+. +..+|+||+|+|||||++|++.++++.++++|||||++.+++.+.
T Consensus 157 ~~~~i~~~~~~np~~~~G~~t~~~Ei~~q~~~~--~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~ 234 (341)
T 1f2d_A 157 KPYPIPAGCSEHKYGGLGFVGFADEVINQEVEL--GIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT 234 (341)
T ss_dssp CEEEECGGGTTSTTTTTHHHHHHHHHHHHHHHH--TCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHH
T ss_pred cEEEeCCCcCCCCccHHHHHHHHHHHHHHHHhc--CCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 56889998 999999999999999999999631 246999999999999999999999999999999999999998776
Q ss_pred HHHHHH----hHhhhCCC----------CCCCCeEEeccCCccchHHHHHH
Q 021545 259 YDYTQG----LLDGLNAG----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 259 ~~~i~~----~~~g~~~~----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
...+.+ ++++++.+ ...|+++.|+|.+.+..+..+..
T Consensus 235 ~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 285 (341)
T 1f2d_A 235 KEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAE 285 (341)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHH
Confidence 554433 34455532 23567888888887777666543
No 4
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1e-40 Score=324.93 Aligned_cols=257 Identities=18% Similarity=0.147 Sum_probs=187.5
Q ss_pred cccccccccccCCC---------CCchhhhcCCCCc---------cccccCCCCCCccccCCCCCCC------CCCCCCC
Q 021545 11 DAFGFKFLTKTSYA---------PPSWASHLAPIPS---------HVFSLGHFPTPIHKWNLPNLPH------NTERDDL 66 (311)
Q Consensus 11 ~~~~~~~~~~~~~~---------~p~w~~~l~~~p~---------~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl 66 (311)
|+|.++|.++-+|+ +|.|++.+. |. .++.+.+++|||++ +++|++ |+|+|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~ig~TPLv~--l~~Ls~~~g~~I~lK~E~l 147 (430)
T 4aec_A 72 SASDFSLAMKRQSRSFADGSERDPSVVCEAVK--RETGPDGLNIADNVSQLIGKTPMVY--LNSIAKGCVANIAAKLEIM 147 (430)
T ss_dssp ------------------------------CC--CCCTTSSCSCBSSGGGGSSCCCEEE--CCGGGTTCSSEEEEEEGGG
T ss_pred cccchhhcccCccceeecCCCCCChhHhhhcC--ccccccccchhhhhhccCCCCCeEE--ChhhhhhcCCeEEEEECCC
Confidence 34778889988999 999999887 33 47888999999999 666654 7899999
Q ss_pred CCCCCCchhHHhHHHHHHHHHHcCC-----CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHH
Q 021545 67 SGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLL 141 (311)
Q Consensus 67 ~~~~~ggnK~Rkl~~ll~~a~~~G~-----~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~ 141 (311)
++ +||||+|++.+++.+|+++|. ++||++ |+||||+|+|++|+++|++|+||||+..+ ..|+.
T Consensus 148 np--tGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~a--SsGNhG~AlA~aAa~~Gl~~~IvmP~~~s--------~~k~~ 215 (430)
T 4aec_A 148 EP--CCSVKDRIGYSMVTDAEQKGFISPGKSVLVEP--TSGNTGIGLAFIAASRGYRLILTMPASMS--------MERRV 215 (430)
T ss_dssp ST--TSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHH
T ss_pred CC--CCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEE--CCCHHHHHHHHHHHHhCCEEEEEEcCCCC--------HHHHH
Confidence 98 699999999999999999987 678875 56999999999999999999999999874 36899
Q ss_pred HHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 142 VERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 142 ~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~-~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
+++.+||+|+.++.+ .|++ ..+ .++++.++.+..|+++ ++.|+.+ ..||.+++.||++|+. ..+|+
T Consensus 216 ~~r~~GAeVv~v~~~~~~~~-----a~~-~a~el~~~~~~~~~i~-~~~np~~~~aG~~T~a~EI~eQl~-----~~~D~ 283 (430)
T 4aec_A 216 LLKAFGAELVLTDPAKGMTG-----AVQ-KAEEILKNTPDAYMLQ-QFDNPANPKIHYETTGPEIWDDTK-----GKVDI 283 (430)
T ss_dssp HHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHSTTEEECC-TTTCTHHHHHHHHTHHHHHHHHTT-----SCEEE
T ss_pred HHHHCCCEEEEECCCCChHH-----HHH-HHHHHHHhcCCcEEec-CCCCccHHHHHHHHHHHHHHHHcC-----CCCCE
Confidence 999999999999753 3432 223 3344555444455554 4578887 5899999999999985 36999
Q ss_pred EEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHHhHhhhCCC--------CCCCCeEEeccCCccchH
Q 021545 220 IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGLLDGLNAG--------VDSRDIVNIQNVSVYMTF 290 (311)
Q Consensus 220 ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~~~~g~~~~--------~~~~dvv~v~e~~~~~~~ 290 (311)
||+|+|+|||++|++.++++.++++|||||++.+++.+.. +.....+++++.+ ...|+++.|+|.+.+..+
T Consensus 284 vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~ 363 (430)
T 4aec_A 284 FVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETA 363 (430)
T ss_dssp EEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHH
Confidence 9999999999999999999999999999999999865431 1122345666652 236889999998887776
Q ss_pred HHHHH
Q 021545 291 KNILM 295 (311)
Q Consensus 291 ~~~~~ 295 (311)
..+..
T Consensus 364 r~La~ 368 (430)
T 4aec_A 364 KQLAL 368 (430)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 5
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=6.4e-40 Score=310.28 Aligned_cols=255 Identities=28% Similarity=0.434 Sum_probs=196.1
Q ss_pred cCCCCccccccCCCCCCccccCCCCC-----C--C-CCCCCCCC-CCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccc
Q 021545 32 LAPIPSHVFSLGHFPTPIHKWNLPNL-----P--H-NTERDDLS-GMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQS 102 (311)
Q Consensus 32 l~~~p~~~~~~~~~~TPL~~~~~~~L-----s--~-~vKRedl~-~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~G 102 (311)
|..+| ++.+..++|||++ +++| . + |+|+||+| ++.+||||+|++.+++.+|+++|.++||++|+|+|
T Consensus 3 ~~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~~~vv~~GassG 78 (338)
T 1tzj_A 3 LQRFP--RYPLTFGPTPIQP--LARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQS 78 (338)
T ss_dssp GGGSC--CCCCSSSSCCEEE--CHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTCCEEEEEEETTC
T ss_pred cccCC--ccccCCCCCccEE--HHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCchh
Confidence 34455 6889999999999 4433 2 2 78999996 75579999999999999999999999999888999
Q ss_pred hHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcE
Q 021545 103 NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPY 182 (311)
Q Consensus 103 Nhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y 182 (311)
|||+|+|++|+++|++|++|||+..+...+.+...+|+.+++.+||+|+.++.. +++... +...++++++.++.+..|
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~-~~~~~~-~~~~~~a~~l~~~~~~~~ 156 (338)
T 1tzj_A 79 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG-FDIGFR-RSWEDALESVRAAGGKPY 156 (338)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc-chhhHH-HHHHHHHHHHHhcCCceE
Confidence 999999999999999999999998753211111246999999999999999864 432100 112344556666655678
Q ss_pred EecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCCchhhHH
Q 021545 183 VIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDPDYFYD 260 (311)
Q Consensus 183 ~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~~~~~~~ 260 (311)
++|.+ ++|+.++.||.+++.||++|+.+. +..+|+||+|+|||||++|++.++++. .++ |||||++.+++.+...
T Consensus 157 ~~p~~~~~n~~~~~g~~t~~~Ei~~q~~~~--~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~ 233 (338)
T 1tzj_A 157 AIPAGCSDHPLGGLGFVGFAEEVRAQEAEL--GFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTRE 233 (338)
T ss_dssp ECCGGGTSSTTTTTHHHHHHHHHHHHHHHH--TSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHH
T ss_pred EeCCCcCCCcccHHHHHHHHHHHHHHHHhc--CCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHH
Confidence 89998 899999999999999999999631 136999999999999999999999988 788 9999999999877655
Q ss_pred HHH----HhHhhhCCC------------CCCCCeEEeccCCccchHHHHHH
Q 021545 261 YTQ----GLLDGLNAG------------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 ~i~----~~~~g~~~~------------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+. .+.++++.+ ...++++.|+|.+.+.++..+..
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 284 (338)
T 1tzj_A 234 QITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCAR 284 (338)
T ss_dssp HHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHH
Confidence 443 344445531 12456777777777766666543
No 6
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.2e-37 Score=291.44 Aligned_cols=230 Identities=19% Similarity=0.159 Sum_probs=166.1
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 108 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~Al 108 (311)
++...+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|+++|. ++||+ +|+||||+|+
T Consensus 7 ~i~~~~~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~a~ 80 (308)
T 2egu_A 7 SITELIGDTPAVK--LNRIVDEDSADVYLKLEFMNP--GSSVKDRIALAMIEAAEKAGKLKPGDTIVE--PTSGNTGIGL 80 (308)
T ss_dssp CGGGGSSCCCEEE--CCSSSCTTSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECCHHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccccCCCEEEEEecccCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHH
Confidence 6777889999999 677753 789999976 799999999999999999887 67886 5789999999
Q ss_pred HHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCC
Q 021545 109 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 187 (311)
Q Consensus 109 A~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g 187 (311)
|++|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.+. +++.+
T Consensus 81 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~-----~~~-~a~~l~~~~~~--~~~~~ 144 (308)
T 2egu_A 81 AMVAAAKGYKAVLVMPDTMS--------LERRNLLRAYGAELVLTPGAQGMRG-----AIA-KAEELVREHGY--FMPQQ 144 (308)
T ss_dssp HHHHHHHTCEEEEEEESCSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHHCC--BCC--
T ss_pred HHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHHHCcC--CcCCc
Confidence 99999999999999999864 35899999999999999864 2432 222 34445544323 45777
Q ss_pred CCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHHh
Q 021545 188 GSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 265 (311)
Q Consensus 188 ~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~~ 265 (311)
+.|+.++ .||.+++.||++|++ ..+|+||+|+|+|||++|++.++++.++++|||||++.+++.+.. +.....
T Consensus 145 ~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~ 219 (308)
T 2egu_A 145 FKNEANPEIHRLTTGKEIVEQMG-----DQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHK 219 (308)
T ss_dssp ------------CHHHHHHHHHT-----TCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-------------
T ss_pred CCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcc
Confidence 7888875 689999999999996 359999999999999999999999989999999999999864321 122234
Q ss_pred HhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 266 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 266 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 220 ~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~ 257 (308)
T 2egu_A 220 IQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAR 257 (308)
T ss_dssp ----------CCCCCCSCSEEEEECHHHHHHHHHHHHH
T ss_pred cCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHH
Confidence 4555531 23688999999998888777654
No 7
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=4.5e-37 Score=288.13 Aligned_cols=231 Identities=19% Similarity=0.175 Sum_probs=185.3
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 108 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~Al 108 (311)
++...+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|+++|. ++||+ +|+||||+|+
T Consensus 9 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~al 82 (313)
T 2q3b_A 9 DITQLIGRTPLVR--LRRVTDGAVADIVAKLEFFNP--ANSVKDRIGVAMLQAAEQAGLIKPDTIILE--PTSGNTGIAL 82 (313)
T ss_dssp SGGGGSCCCCEEE--CSSSCTTCCSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECSSHHHHHH
T ss_pred hHHHhcCCCceEE--CcccccccCcEEEEEehhcCC--CCcHHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHH
Confidence 6778889999999 677653 789999996 799999999999999999887 67886 5789999999
Q ss_pred HHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCC
Q 021545 109 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 187 (311)
Q Consensus 109 A~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g 187 (311)
|++|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.+. .+++.+
T Consensus 83 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~-----~~~-~a~~l~~~~~~-~~~~~~ 147 (313)
T 2q3b_A 83 AMVCAARGYRCVLTMPETMS--------LERRMLLRAYGAELILTPGADGMSG-----AIA-KAEELAKTDQR-YFVPQQ 147 (313)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHCTT-EECCCT
T ss_pred HHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEeCCCCCHHH-----HHH-HHHHHHHhCCC-EEeCCC
Confidence 99999999999999999864 35899999999999999863 2432 223 34455554433 356777
Q ss_pred CCchhHHHH-HHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHHh
Q 021545 188 GSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 265 (311)
Q Consensus 188 ~~n~~~~~G-y~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~~ 265 (311)
+.|+.++.| |.+++.||.+|+. .++|+||+|+|+|||++|++.++++.++++|||||++.+++.+.. +.....
T Consensus 148 ~~n~~~~~~~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~ 222 (313)
T 2q3b_A 148 FENPANPAIHRVTTAEEVWRDTD-----GKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHP 222 (313)
T ss_dssp TTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCC
T ss_pred CCChhhHHHHHHHHHHHHHHHcC-----CCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcc
Confidence 889998866 8999999999985 359999999999999999999999989999999999999875421 111224
Q ss_pred HhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 266 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 266 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 223 ~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~ 260 (313)
T 2q3b_A 223 IQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAR 260 (313)
T ss_dssp CTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred cCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHH
Confidence 4555542 12578999999998888777654
No 8
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=7.9e-37 Score=286.84 Aligned_cols=232 Identities=16% Similarity=0.119 Sum_probs=183.2
Q ss_pred ccccCCCCCCccccCCCCC---CC-CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNL---PH-NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAAAV 110 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~L---s~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~AlA~ 110 (311)
++...+++|||++ +++| .+ |+|+|++++ +||||+|++.+++.+|+++|. ++||++ |+||||+|+|+
T Consensus 6 ~i~~~~~~TPL~~--l~~l~~g~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~~~~vv~~--ssGN~g~a~A~ 79 (316)
T 1y7l_A 6 DNSYSIGNTPLVR--LKHFGHNGNVVVKIEGRNP--SYSVKCRIGANMVWQAEKDGTLTKGKEIVDA--TSGNTGIALAY 79 (316)
T ss_dssp SGGGGCCCCCEEE--CSSSSSTTCEEEEETTSSG--GGBTHHHHHHHHHHHHHHTTSSCTTCEEEES--CCSHHHHHHHH
T ss_pred hhHHhcCCCCcEE--CccCCCCCEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEe--CCcHHHHHHHH
Confidence 6778889999999 5554 12 789999976 799999999999999999887 688874 57999999999
Q ss_pred HHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCC
Q 021545 111 AAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS 189 (311)
Q Consensus 111 ~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~ 189 (311)
+|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.+..|+++.++.
T Consensus 80 ~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~-----~~~-~a~~~~~~~~~~~~~~~~~~ 145 (316)
T 1y7l_A 80 VAAARGYKITLTMPETMS--------LERKRLLCGLGVNLVLTEGAKGMKG-----AIA-KAEEIVASDPSRYVMLKQFE 145 (316)
T ss_dssp HHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHCTTTEECCCTTT
T ss_pred HHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH-----HHH-HHHHHHHhCCCCEEECCCCC
Confidence 999999999999999864 36899999999999999863 2442 223 34455555445633444678
Q ss_pred chhHHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC-CCCeEEEEeccCCchhhHHH------
Q 021545 190 NSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYDY------ 261 (311)
Q Consensus 190 n~~~~~-Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~-~~~rVigV~~~g~~~~~~~~------ 261 (311)
|+.+.. ||.+++.||++|++ ..+|+||+|+|+|||++|++.++++.+ +.+|||||++.+++....-+
T Consensus 146 n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~ 220 (316)
T 1y7l_A 146 NPANPQIHRETTGPEIWKDTD-----GKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVK 220 (316)
T ss_dssp CTHHHHHHHHTHHHHHHHHTT-----TCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHcC-----CCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccC
Confidence 888765 58999999999986 359999999999999999999999988 99999999999986543211
Q ss_pred -HHHhHhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 262 -TQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 -i~~~~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
....+++++.+ ...|+++.|+|.+++.++..+..
T Consensus 221 ~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 263 (316)
T 1y7l_A 221 PGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMA 263 (316)
T ss_dssp CCCCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHH
Confidence 01234555542 12688999999988888776654
No 9
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=1.9e-36 Score=282.97 Aligned_cols=224 Identities=17% Similarity=0.132 Sum_probs=179.7
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 108 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~Al 108 (311)
++...+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+++++|. ++||++ |+||||+|+
T Consensus 3 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~g~~vv~~--ssGN~g~a~ 76 (303)
T 2v03_A 3 TLEQTIGNTPLVK--LQRMGPDNGSEVWLKLEGNNP--AGSVKDRAALSMIVEAEKRGEIKPGDVLIEA--TSGNTGIAL 76 (303)
T ss_dssp SGGGGSSCCCEEE--CSSSSCSSSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEE--CSSHHHHHH
T ss_pred chHhhcCCCCcEE--CcccccccCCEEEEEeccCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCEEEEE--CCcHHHHHH
Confidence 5677789999999 677764 689999996 799999999999999999887 789876 569999999
Q ss_pred HHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCC
Q 021545 109 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 187 (311)
Q Consensus 109 A~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g 187 (311)
|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ . .+.++++.++.+..| ..+
T Consensus 77 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~-----~-~~~a~~~~~~~~~~~--~~~ 140 (303)
T 2v03_A 77 AMIAALKGYRMKLLMPDNMS--------QERRAAMRAYGAELILVTKEQGMEG-----A-RDLALEMANRGEGKL--LDQ 140 (303)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTTHHHH-----H-HHHHHHHHHTTSCEE--CCT
T ss_pred HHHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----H-HHHHHHHHHhCCCcc--cCC
Confidence 99999999999999999864 36899999999999999863 3543 2 233445555422333 334
Q ss_pred CCchhHHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhH
Q 021545 188 GSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 266 (311)
Q Consensus 188 ~~n~~~~~-Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~ 266 (311)
+.|+.+.. ||.+++.||++|++ ..+|+||+|+|+|||++|++.++++..+.+|||||++.+++.+.. +
T Consensus 141 ~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~------~ 209 (303)
T 2v03_A 141 FNNPDNPYAHYTTTGPEIWQQTG-----GRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG------I 209 (303)
T ss_dssp TTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT------C
T ss_pred cCChhhHHHhcCCcHHHHHHHhC-----CCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc------C
Confidence 57888765 78999999999986 359999999999999999999999999999999999999875432 3
Q ss_pred hhhCC--------CCCCCCeEEeccCCccchHHHHHH
Q 021545 267 DGLNA--------GVDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 267 ~g~~~--------~~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
++++. ....|+++.|+|.+...++..+..
T Consensus 210 ~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 246 (303)
T 2v03_A 210 RRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAV 246 (303)
T ss_dssp CCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred CcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHH
Confidence 33332 123688999999988887776654
No 10
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=9e-38 Score=297.21 Aligned_cols=228 Identities=18% Similarity=0.157 Sum_probs=180.4
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHc----CCCEEEEeCCccchHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQ----GADCIITIGGIQSNHCRAA 108 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~----G~~~vVt~g~s~GNhg~Al 108 (311)
++....++|||++ +++|++ |+|+|++++ +||||+|++.+++.+++++ +.++||++ |+||||+|+
T Consensus 18 ~i~~~i~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~~~~~vv~~--SsGNhg~a~ 91 (346)
T 3l6b_A 18 NIRDSIHLTPVLT--SSILNQLTGRNLFFKCELFQK--TGSFKIRGALNAVRSLVPDALERKPKAVVTH--SSGNHGQAL 91 (346)
T ss_dssp HHGGGSCCCCEEC--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHTTC-----CCCSCEEEE--CSSHHHHHH
T ss_pred HHhcccCCCCeEE--chhhHHHhCCeEEEEeCCCCC--CCCcHHHHHHHHHHHHHHhccccCCCEEEEe--CCCHHHHHH
Confidence 5666779999999 666543 899999997 7999999999999998775 66788876 569999999
Q ss_pred HHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCC
Q 021545 109 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGG 188 (311)
Q Consensus 109 A~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~ 188 (311)
|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. |++ + .+.++++.++.+..|+.|++
T Consensus 92 A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~-----~-~~~a~~l~~~~~~~~i~~~~- 155 (346)
T 3l6b_A 92 TYAAKLEGIPAYIVVPQTAP--------DCKKLAIQAYGASIVYCEPS-DES-----R-ENVAKRVTEETEGIMVHPNQ- 155 (346)
T ss_dssp HHHHHHTTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECSS-HHH-----H-HHHHHHHHHHHTCEECCSSS-
T ss_pred HHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCC-HHH-----H-HHHHHHHHHhcCCEEECCCC-
Confidence 99999999999999999875 36899999999999999864 543 2 22334454443344555554
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH--------
Q 021545 189 SNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-------- 260 (311)
Q Consensus 189 ~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~-------- 260 (311)
|+....||.+++.||++|++ .+|+||+|+|||||++|++.+++..++++|||||++.+++.+...
T Consensus 156 -np~~~~g~~t~~~Ei~~q~~------~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~s~~~g~~~~ 228 (346)
T 3l6b_A 156 -EPAVIAGQGTIALEVLNQVP------LVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMP 228 (346)
T ss_dssp -CHHHHHHHHHHHHHHHHHST------TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCC
T ss_pred -ChHHHHHHHHHHHHHHHhCC------CCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHHHHHHHcCCccc
Confidence 88889999999999999984 599999999999999999999999999999999999998754321
Q ss_pred ---HHHHhHhhhCCC----------CCCCCeEEeccCCccchHHHHHH
Q 021545 261 ---YTQGLLDGLNAG----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 ---~i~~~~~g~~~~----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+.+++++++.. ...|+++.|+|.+++.++..+..
T Consensus 229 ~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 276 (346)
T 3l6b_A 229 NLYPPETIADGVKSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWE 276 (346)
T ss_dssp CSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCCchhhhccCCCcHHHHHHHHHcCCeEEEECHHHHHHHHHHHHH
Confidence 123344554421 12688999999998888776654
No 11
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=4.6e-37 Score=286.98 Aligned_cols=229 Identities=17% Similarity=0.150 Sum_probs=181.3
Q ss_pred cccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----C--EEEEeCCccchHHHH
Q 021545 40 FSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----D--CIITIGGIQSNHCRA 107 (311)
Q Consensus 40 ~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~--~vVt~g~s~GNhg~A 107 (311)
+...+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|+++|. + +||+ +|+||||+|
T Consensus 3 i~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~--assGN~g~a 76 (304)
T 1ve1_A 3 VEGAIGKTPVVR--LAKVVEPDMAEVWVKLEGLNP--GGSIKDRPAWYMIKDAEERGILRPGSGQVIVE--PTSGNTGIG 76 (304)
T ss_dssp GGGGCCCCCEEE--CCSSSCTTSCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEE--SCCSHHHHH
T ss_pred hHHhcCCCCcEE--CcccccccCCEEEEEecccCC--CCcHHHHHHHHHHHHHHHcCCCCCCCccEEEE--eCCcHHHHH
Confidence 345578999999 677754 789999986 799999999999999999886 6 7886 578999999
Q ss_pred HHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCcc-ccccCcHHHHHHHHHHHHHcCCCcEEecC
Q 021545 108 AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEE-YSKIGSVTLTNILKEKLLKEGRRPYVIPV 186 (311)
Q Consensus 108 lA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~-~~~~~~~~~~~~~~~~l~~~g~~~y~ip~ 186 (311)
+|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++... |++ +.+ .++++.++ +..| ++.
T Consensus 77 ~A~~a~~~G~~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~~~~~~~-----~~~-~a~~l~~~-~~~~-~~~ 140 (304)
T 1ve1_A 77 LAMIAASRGYRLILTMPAQMS--------EERKRVLKAFGAELVLTDPERRMLA-----ARE-EALRLKEE-LGAF-MPD 140 (304)
T ss_dssp HHHHHHHHTCEEEEEEETTCC--------HHHHHHHHHTTCEEEEECTTTHHHH-----HHH-HHHHHHHH-HTCB-CCC
T ss_pred HHHHHHHcCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHhc-CCCE-eCC
Confidence 999999999999999999864 468999999999999998642 543 222 33445443 2334 455
Q ss_pred CCCchhHHHH-HHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH-HHHH
Q 021545 187 GGSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-YTQG 264 (311)
Q Consensus 187 g~~n~~~~~G-y~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~-~i~~ 264 (311)
++.|+.++.| |.+++.||++|+. ..+|+||+|+|+|||++|++.++++..+++|||||++.+++.+... ....
T Consensus 141 ~~~n~~~~~g~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~ 215 (304)
T 1ve1_A 141 QFKNPANVRAHYETTGPELYEALE-----GRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQH 215 (304)
T ss_dssp TTTCHHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCC
T ss_pred CCCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCc
Confidence 6789999999 6999999999986 3599999999999999999999999999999999999998643210 1112
Q ss_pred hHhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 265 LLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 265 ~~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 216 ~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 254 (304)
T 1ve1_A 216 GFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAR 254 (304)
T ss_dssp SCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHH
Confidence 34555542 12678999999988888777654
No 12
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=1.6e-36 Score=287.26 Aligned_cols=231 Identities=14% Similarity=0.085 Sum_probs=180.5
Q ss_pred ccccCCCCCCccccCCCCCCC-----CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEE-EEeCCccchHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH-----NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCI-ITIGGIQSNHCRAA 108 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~-----~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~v-Vt~g~s~GNhg~Al 108 (311)
++...+++|||++ +++|.. |+|+|++++ +||||+|++.+++.+|+++|. ++| |++ |+||||+|+
T Consensus 14 ~i~~~ig~TPL~~--l~~l~~~g~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~a--SsGN~g~al 87 (334)
T 3tbh_A 14 SIDQLIGQTPALY--LNKLNNTKAKVVLKMECENP--MASVKDRLGFAIYDKAEKEGKLIPGKSIVVES--SSGNTGVSL 87 (334)
T ss_dssp SGGGGSSCCCEEE--CCTTCCSSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccCCCCEEEEEeCCCCC--ccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEe--CCCHHHHHH
Confidence 6888899999999 666521 789999998 699999999999999999987 774 765 569999999
Q ss_pred HHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCC
Q 021545 109 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 187 (311)
Q Consensus 109 A~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g 187 (311)
|++|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+. ++++.++.+..|++ .+
T Consensus 88 A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~~-a~~~~~~~~~~~~i-~~ 152 (334)
T 3tbh_A 88 AHLGAIRGYKVIITMPESMS--------LERRCLLRIFGAEVILTPAALGMKG-----AVAM-AKKIVAANPNAVLA-DQ 152 (334)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHHH-HHHHHHHCTTEEEC-CT
T ss_pred HHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCchH-----HHHH-HHHHHHhCCCEEEC-Cc
Confidence 99999999999999999874 36899999999999999863 2432 3333 33444443344544 44
Q ss_pred CCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHHh
Q 021545 188 GSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 265 (311)
Q Consensus 188 ~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~~ 265 (311)
+.|+.++ .||.+++.||++|+. ..+|+||+|+|||||++|++.+++...+++|||||++.+++.+.. ......
T Consensus 153 ~~np~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~ 227 (334)
T 3tbh_A 153 FATKYNALIHEETTGPEIWEQTN-----HNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHK 227 (334)
T ss_dssp TTCHHHHHHHHHTHHHHHHHHTT-----SCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCS
T ss_pred cCChhHHHHHHHHHHHHHHHHhC-----CCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCee
Confidence 5678754 578899999999985 369999999999999999999999999999999999999875431 111223
Q ss_pred HhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 266 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 266 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+++++.+ ...|+++.|+|.+.+..+..+..
T Consensus 228 ~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 265 (334)
T 3tbh_A 228 IQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTR 265 (334)
T ss_dssp CTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 4455532 23688999999988877766543
No 13
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=9.5e-37 Score=287.81 Aligned_cols=228 Identities=15% Similarity=0.084 Sum_probs=180.7
Q ss_pred ccccCCCCCCccccCCCCCCC-------------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCcc
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH-------------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQ 101 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~-------------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~ 101 (311)
++...+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|+++|. ++||++ |+
T Consensus 8 ~i~~~ig~TPL~~--~~~l~~~~~~~~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~l~~~~~vv~a--Ss 81 (325)
T 3dwg_A 8 SLLQALGNTPLVG--LQRLSPRWDDGRDGPHVRLWAKLEDRNP--TGSIKDRPAVRMIEQAEADGLLRPGATILEP--TS 81 (325)
T ss_dssp STGGGCSCCCEEE--CTTTSSBSSCBTTBCCEEEEEEETTSST--TSBTTHHHHHHHHHHHHHTTCCCTTCEEEEE--CS
T ss_pred CHHHhcCCCCcEE--ccccchhhcccccCCCcEEEEEECCCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEe--CC
Confidence 5667789999999 565532 689999998 699999999999999999997 788875 67
Q ss_pred chHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCC
Q 021545 102 SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRR 180 (311)
Q Consensus 102 GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~ 180 (311)
||||+|+|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.++
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~l~~~~~~ 147 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTS--------VERRQLLELYGAQIIFSAAEGGSNT-----AVA-TAKELAATNPS 147 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSC--------HHHHHHHHHHTCEEEEECSTTTHHH-----HHH-HHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCHHH-----HHH-HHHHHHHhCCC
Confidence 999999999999999999999999874 36899999999999999863 2432 223 34455554433
Q ss_pred cEEecCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH
Q 021545 181 PYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY 259 (311)
Q Consensus 181 ~y~ip~g~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~ 259 (311)
.| ++.++.|+.+. .||.+++.||++|++ .+|+||+|+|||||++|++.+++...+++|||||++.+++.+
T Consensus 148 ~~-~~~~~~np~~~~~g~~t~~~Ei~~q~~------~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~-- 218 (325)
T 3dwg_A 148 WV-MLYQYGNPANTDSHYCGTGPELLADLP------EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV-- 218 (325)
T ss_dssp SB-CCCTTTCHHHHHHHHHTHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG--
T ss_pred eE-eCCCCCCHHHHHHHHHHHHHHHHHhcC------CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch--
Confidence 44 44556799887 699999999999985 399999999999999999999999999999999999998764
Q ss_pred HHHHHhHhhhCC----CCCCCCeEEeccCCccchHHHHHH
Q 021545 260 DYTQGLLDGLNA----GVDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 260 ~~i~~~~~g~~~----~~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
..+..+.+++.. ....|+++.|+|.+.+..+..+..
T Consensus 219 ~~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (325)
T 3dwg_A 219 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVH 258 (325)
T ss_dssp GCCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHH
T ss_pred hccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHH
Confidence 112222222211 123688999999998888776654
No 14
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=7.4e-37 Score=290.52 Aligned_cols=231 Identities=17% Similarity=0.124 Sum_probs=184.4
Q ss_pred ccccCCCCCCccccCCCCCCC----------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH----------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNH 104 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~----------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNh 104 (311)
++....++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|.++|. ++||++ |+|||
T Consensus 16 ~i~~~~g~TPL~~--~~~l~~~~~~~~g~~v~~K~E~~~p--tGSfKdR~a~~~l~~a~~~g~~~~g~~vv~a--SsGN~ 89 (343)
T 2pqm_A 16 NILETIGGTPLVE--LHGVTEHPRIKKGTRILVKLEYFNP--MSSVKDRVGFNIVYQAIKDGRLKPGMEIIES--TSGNT 89 (343)
T ss_dssp SGGGGSSCCCEEE--CCGGGCSTTSCTTCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHHTSSCTTCEEEEE--CSSHH
T ss_pred HHHhhcCCCCeEE--CCccccccccccCcEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEE--CCcHH
Confidence 6778889999999 565542 689999987 799999999999999999887 688876 46999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEE
Q 021545 105 CRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYV 183 (311)
Q Consensus 105 g~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ 183 (311)
|+|+|++|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ +.+ .++++.++.+..|+
T Consensus 90 g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~~~~~~~~~y~ 155 (343)
T 2pqm_A 90 GIALCQAGAVFGYRVNIAMPSTMS--------VERQMIMKAFGAELILTEGKKGMPG-----AIE-EVNKMIKENPGKYF 155 (343)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHSTTTEE
T ss_pred HHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCHHH-----HHH-HHHHHHHhCCCcEE
Confidence 999999999999999999999864 36899999999999999863 2442 223 34455555445656
Q ss_pred ecCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HH
Q 021545 184 IPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DY 261 (311)
Q Consensus 184 ip~g~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~ 261 (311)
++.++.|+.++ .||.+++ ||++|++ ..+|+||+|+|+|||++|++.++++.++++|||||++.+++.... +.
T Consensus 156 ~~~~~~n~~n~~~g~~t~~-Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~ 229 (343)
T 2pqm_A 156 VANQFGNPDNTAAHHYTAN-EIWEDTD-----GEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAK 229 (343)
T ss_dssp ECCTTTCHHHHHHHHHHHH-HHHHHTT-----TCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCC
T ss_pred ECCCCCChhHHHHHHHHHH-HHHHHcC-----CCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCC
Confidence 77778899876 6799999 9999985 359999999999999999999999999999999999999864331 11
Q ss_pred HHHhHhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 262 TQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 i~~~~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
....+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 230 ~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~ 271 (343)
T 2pqm_A 230 GPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVK 271 (343)
T ss_dssp CCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 12244555532 22588999999988888777654
No 15
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=9.1e-37 Score=287.24 Aligned_cols=231 Identities=16% Similarity=0.114 Sum_probs=181.7
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC-----CEEEEeCCccchHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRA 107 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~-----~~vVt~g~s~GNhg~A 107 (311)
++.+..++|||++ +++|++ |+|+|++++ +||||+|++.+++.+++++|. ++||+ +|+||||+|
T Consensus 8 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~--assGN~g~a 81 (322)
T 1z7w_A 8 DVTELIGNTPLVY--LNNVAEGCVGRVAAKLEMMEP--CSSVKDRIGFSMISDAEKKGLIKPGESVLIE--PTSGNTGVG 81 (322)
T ss_dssp SGGGGSSCCCEEE--CCGGGTTCSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEE--ECSSHHHHH
T ss_pred HHHHhcCCCCeEE--CccccccCCceEEEEecccCC--CCchHHHHHHHHHHHHHHcCCCCCCCCEEEE--eCCCHHHHH
Confidence 6888889999999 676653 789999986 799999999999999999997 68886 468999999
Q ss_pred HHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecC
Q 021545 108 AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPV 186 (311)
Q Consensus 108 lA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~ 186 (311)
+|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.++.|+++
T Consensus 82 lA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~~~~~~~~~~~i~- 146 (322)
T 1z7w_A 82 LAFTAAAKGYKLIITMPASMS--------TERRIILLAFGVELVLTDPAKGMKG-----AIA-KAEEILAKTPNGYMLQ- 146 (322)
T ss_dssp HHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHCTTEEECC-
T ss_pred HHHHHHHcCCCEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH-----HHH-HHHHHHHhCCCeEeCC-
Confidence 999999999999999999864 36899999999999999863 2432 223 3445555544455543
Q ss_pred CCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHH
Q 021545 187 GGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQG 264 (311)
Q Consensus 187 g~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~ 264 (311)
++.|+.+. .||.+++.||++|+. ..+|+||+|+|+|||++|++.++++..+++|||||++.+++.+.. +....
T Consensus 147 ~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~ 221 (322)
T 1z7w_A 147 QFENPANPKIHYETTGPEIWKGTG-----GKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPH 221 (322)
T ss_dssp TTTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCC
T ss_pred CCCChhHHHHHHHHHHHHHHHHhc-----CCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCc
Confidence 45677664 588999999999985 369999999999999999999999989999999999999765421 01111
Q ss_pred hHhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 265 LLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 265 ~~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 222 ~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 260 (322)
T 1z7w_A 222 KIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLAL 260 (322)
T ss_dssp SCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred ccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHH
Confidence 24555542 12688999999988877766654
No 16
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=5.8e-37 Score=293.51 Aligned_cols=235 Identities=17% Similarity=0.118 Sum_probs=180.2
Q ss_pred cCCCCccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHH
Q 021545 32 LAPIPSHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC 105 (311)
Q Consensus 32 l~~~p~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg 105 (311)
+..+| +......+|||++ +++|++ |+|+|++++ +||||+|++.+++.++.++|.++||++ |+||||
T Consensus 34 ~~~~~--~~~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~vv~a--SsGN~g 105 (364)
T 4h27_A 34 SEFMM--SGEPLHVKTPIRD--SMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCS--SSGNAG 105 (364)
T ss_dssp ---------CCSSCCCCEEE--EHHHHHHHTSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEC--CSSHHH
T ss_pred HHhhh--hcCCCCCcCCeEE--ChhhHHHhCCEEEEEeCCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEe--CCChHH
Confidence 34445 3455678999999 666543 799999997 799999999999999999999999986 459999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEec
Q 021545 106 RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP 185 (311)
Q Consensus 106 ~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip 185 (311)
+|+|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++. .|++ + .+.++++.++.+..++++
T Consensus 106 ~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv~v~~-~~~~-----a-~~~a~~l~~~~~~~~~~~ 170 (364)
T 4h27_A 106 MAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATVKVVGE-LLDE-----A-FELAKALAKNNPGWVYIP 170 (364)
T ss_dssp HHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHTTTCEEEEECS-STTH-----H-HHHHHHHHHHSTTEEEEC
T ss_pred HHHHHHHHHhCCceEEEECCCCC--------HHHHHHHHHcCCEEEEECC-CHHH-----H-HHHHHHHHHhCCCeEEeC
Confidence 99999999999999999999875 3589999999999999986 4653 2 233445555432334443
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC-CCCeEEEEeccCCchhhHH----
Q 021545 186 VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYD---- 260 (311)
Q Consensus 186 ~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~-~~~rVigV~~~g~~~~~~~---- 260 (311)
. +.|+.++.||.+++.||++|++ ..+|+||+|+|+|||++|++.+++..+ ++++||||++.+++.+...
T Consensus 171 ~-~~np~~~~G~~t~~~Ei~~q~~-----~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g 244 (364)
T 4h27_A 171 P-FDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAG 244 (364)
T ss_dssp S-SCSHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHT
T ss_pred C-CCCHHHHHHHHHHHHHHHHHhC-----CCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCC
Confidence 2 4699999999999999999985 359999999999999999999999887 7899999999998764321
Q ss_pred ------HHHHhHhhhCCCC-----------CCCCeEEeccCCccchHHHHHH
Q 021545 261 ------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 ------~i~~~~~g~~~~~-----------~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+.+++++++.+. ..++.+.|+|.+++.++..+..
T Consensus 245 ~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 296 (364)
T 4h27_A 245 KLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVD 296 (364)
T ss_dssp SCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHH
T ss_pred CcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 1233455565421 1344567888888877776653
No 17
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9e-37 Score=291.66 Aligned_cols=247 Identities=16% Similarity=0.165 Sum_probs=191.2
Q ss_pred cCCCCCchhh-hcCCCC--ccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC
Q 021545 21 TSYAPPSWAS-HLAPIP--SHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA 91 (311)
Q Consensus 21 ~~~~~p~w~~-~l~~~p--~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~ 91 (311)
..|++-.|+= .+..+. ..++.+.+++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|+++|.
T Consensus 10 ~~~~~~~~ry~~~lp~~~~~~~v~~~~g~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~l~~a~~~g~ 85 (360)
T 2d1f_A 10 QPWPGVIAAYRDRLPVGDDWTPVTLLEGGTPLIA--ATNLSKQTGCTIHLKVEGLNP--TGSFKDRGMTMAVTDALAHGQ 85 (360)
T ss_dssp CCCCCHHHHTGGGSCCCSSCCCCCCCCCCCCEEE--CHHHHHHHSSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTC
T ss_pred cccccchhhhHHhCCCcccCCccccccCCCCCee--chhhHHHhCCeEEEEECCCCC--CcCHHHHHHHHHHHHHHHCCC
Confidence 3455556652 222221 126888999999999 666543 789999985 899999999999999999999
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHH
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNIL 170 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~ 170 (311)
++||++ |+||||+|+|++|+++|++|++|||+. .+ ..|+.+++++||+|+.++.. |++ . .+.
T Consensus 86 ~~vv~a--SsGN~g~alA~~a~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~~-~~~-----~-~~~ 148 (360)
T 2d1f_A 86 RAVLCA--STGNTSASAAAYAARAGITCAVLIPQGKIA--------MGKLAQAVMHGAKIIQIDGN-FDD-----C-LEL 148 (360)
T ss_dssp SEEEEC--CSSHHHHHHHHHHHHHTCEEEEEECSSCCC--------HHHHHHHHHTTCEEEEBSSC-HHH-----H-HHH
T ss_pred CEEEEe--CCcHHHHHHHHHHHHcCCcEEEEEcCCCCC--------HHHHHHHHHcCCEEEEECCC-HHH-----H-HHH
Confidence 999974 789999999999999999999999987 53 46899999999999999874 653 2 233
Q ss_pred HHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC------CCC
Q 021545 171 KEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT------LKA 244 (311)
Q Consensus 171 ~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~------~~~ 244 (311)
++++.++.++.|+++ + .|+.+..||.+++.||++|+. ..+|+||+|+|+|||++|++.++++.. +.+
T Consensus 149 a~~l~~~~~~~~~i~-~-~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~ 221 (360)
T 2d1f_A 149 ARKMAADFPTISLVN-S-VNPVRIEGQKTAAFEIVDVLG-----TAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLP 221 (360)
T ss_dssp HHHHHHHCTTEEECS-T-TCHHHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCC
T ss_pred HHHHHHhcCCeEEcC-C-CChhhhhhHHHHHHHHHHHcC-----CCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCc
Confidence 445655554456665 3 799999999999999999995 358999999999999999999998753 368
Q ss_pred eEEEEeccCCchhhHHHH----HHhHhhhCCCCC-------------CCCeEEeccCCccchHHHHHH
Q 021545 245 KVHAFSVCDDPDYFYDYT----QGLLDGLNAGVD-------------SRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 245 rVigV~~~g~~~~~~~~i----~~~~~g~~~~~~-------------~~dvv~v~e~~~~~~~~~~~~ 295 (311)
|||||++.+++.+..... .+++++++.+.. .++++.|+|.+.+.++..+..
T Consensus 222 ~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 289 (360)
T 2d1f_A 222 RMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVAR 289 (360)
T ss_dssp EEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 999999999765432211 234566665321 247899999888877766643
No 18
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=1.7e-36 Score=288.74 Aligned_cols=230 Identities=16% Similarity=0.168 Sum_probs=182.6
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAA 112 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a 112 (311)
++.+.+++|||++++.++|++ |+|+|++++ +||||+|++.+++.+|+++|.++||++ |+||||+|+|++|
T Consensus 21 ~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~p--tgS~KdR~a~~~l~~a~~~g~~~vv~~--SsGN~g~alA~~a 96 (351)
T 3aey_A 21 VISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNP--TGSFKDRGMTLAVSKAVEGGAQAVACA--STGNTAASAAAYA 96 (351)
T ss_dssp CCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCSEEEES--CSSHHHHHHHHHH
T ss_pred ceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCC--cccHHHHHHHHHHHHHHhcCCCEEEEe--CCCHHHHHHHHHH
Confidence 688999999999931165532 789999996 899999999999999999999999974 7899999999999
Q ss_pred HHcCCcEEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCch
Q 021545 113 KYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS 191 (311)
Q Consensus 113 ~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~ 191 (311)
+.+|++|++|||+. .+ ..|+.+++.+||+|+.++.+ |++ . .+.++++.++.+ .|+++ + .|+
T Consensus 97 ~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~-----~-~~~a~~l~~~~~-~~~~~-~-~n~ 158 (351)
T 3aey_A 97 ARAGILAIVVLPAGYVA--------LGKVAQSLVHGARIVQVEGN-FDD-----A-LRLTQKLTEAFP-VALVN-S-VNP 158 (351)
T ss_dssp HHHTSEEEEEEETTCSC--------HHHHHHHHHTTCEEEEEESC-HHH-----H-HHHHHHHHHHSS-EEECS-T-TCH
T ss_pred HHcCCCEEEEECCCCCC--------HHHHHHHHHcCCEEEEECCC-HHH-----H-HHHHHHHHHhcC-cEecC-C-CCc
Confidence 99999999999997 54 46899999999999999874 653 2 223445555443 45554 3 799
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC------CCCeEEEEeccCCchhhHHHH---
Q 021545 192 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT------LKAKVHAFSVCDDPDYFYDYT--- 262 (311)
Q Consensus 192 ~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~------~~~rVigV~~~g~~~~~~~~i--- 262 (311)
.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++++.. +.+|||||++.+++.+.....
T Consensus 159 ~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~ 233 (351)
T 3aey_A 159 HRLEGQKTLAFEVVDELG-----DAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVER 233 (351)
T ss_dssp HHHHHHHHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSS
T ss_pred cceeeeeeHHHHHHHHcC-----CCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCC
Confidence 999999999999999996 358999999999999999999998764 368999999999765432211
Q ss_pred -HHhHhhhCCCCC-------------CCCeEEeccCCccchHHHHHH
Q 021545 263 -QGLLDGLNAGVD-------------SRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 263 -~~~~~g~~~~~~-------------~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+++++++.+.. .++++.|+|.+.+.++..+..
T Consensus 234 ~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 280 (351)
T 3aey_A 234 PETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAR 280 (351)
T ss_dssp CCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred ccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 235566665321 347899999888877766643
No 19
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=3.2e-36 Score=289.21 Aligned_cols=239 Identities=16% Similarity=0.102 Sum_probs=181.4
Q ss_pred chhhhcCCCCccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCc
Q 021545 27 SWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGI 100 (311)
Q Consensus 27 ~w~~~l~~~p~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s 100 (311)
.|+ -...+| ++....++|||++ +++|++ |+|+|++++ +||||+|++.+++.+|.++|.++||++ |
T Consensus 30 ~~r-y~~~~p--~~~~~~~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tGSfKdRga~~~l~~a~~~g~~~vv~a--S 100 (372)
T 1p5j_A 30 MGR-GSEFMM--SGEPLHVKTPIRD--SMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCS--S 100 (372)
T ss_dssp -------------CCCSSCCCCEEE--EHHHHHHHTSCEEEECGGGSG--GGBTTHHHHHHHHHHHHHTTCCEEEEC--C
T ss_pred ccc-HHHhcc--cccCCCCCCCceE--cHhhHHHhCCEEEEEEcCCCC--CCChHHHHHHHHHHHHHHcCCCEEEEe--C
Confidence 564 334455 4556778999999 565542 799999986 899999999999999999999999986 4
Q ss_pred cchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCC
Q 021545 101 QSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRR 180 (311)
Q Consensus 101 ~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~ 180 (311)
+||||+|+|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++. .|++ . .+.++++.++.+.
T Consensus 101 sGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~-~~~~-----a-~~~a~~l~~~~~~ 165 (372)
T 1p5j_A 101 AGNAGMAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATCKVVGE-LLDE-----A-FELAKALAKNNPG 165 (372)
T ss_dssp SSHHHHHHHHHHHHHTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-CHHH-----H-HHHHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHhcCCEEEEECC-CHHH-----H-HHHHHHHHHhcCC
Confidence 5999999999999999999999999874 3689999999999999986 4653 2 2334455554223
Q ss_pred cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC-CCCeEEEEeccCCchhhH
Q 021545 181 PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFY 259 (311)
Q Consensus 181 ~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~-~~~rVigV~~~g~~~~~~ 259 (311)
.++++ ++.|+.++.||.+++.||++|+. ..+|+||+|+|+|||++|++.++++.+ +++|||||++.+++.+..
T Consensus 166 ~~~v~-~~~n~~~~~G~~t~~~Ei~~ql~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~ 239 (372)
T 1p5j_A 166 WVYIP-PFDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHA 239 (372)
T ss_dssp EEECC-SSCCHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHH
T ss_pred cEEeC-CCCCHHHHhhHHHHHHHHHHHcC-----CCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHH
Confidence 44443 23489999999999999999985 359999999999999999999999987 889999999999875432
Q ss_pred H--H--------HHHhHhhhCCCC-----------CCCCeEEeccCCccchHHHHHH
Q 021545 260 D--Y--------TQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 260 ~--~--------i~~~~~g~~~~~-----------~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
. . +.+++++++.+. ..++++.|+|.+++.++..+..
T Consensus 240 ~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~ 296 (372)
T 1p5j_A 240 ATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVD 296 (372)
T ss_dssp HHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHH
T ss_pred HHHcCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHH
Confidence 1 1 123445555421 2456899999988888776654
No 20
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=282.15 Aligned_cols=224 Identities=17% Similarity=0.189 Sum_probs=177.1
Q ss_pred CCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCC
Q 021545 44 HFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNL 117 (311)
Q Consensus 44 ~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl 117 (311)
..+|||++ +++|++ |+|+|++++ +||||+|++.+++.+++++|.++||++ |+||||+|+|++|+++|+
T Consensus 5 ~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tgS~K~R~a~~~l~~a~~~g~~~vv~~--ssGN~g~alA~~a~~~G~ 78 (318)
T 2rkb_A 5 HVVTPLLE--SWALSQVAGMPVFLKCENVQP--SGSFKIRGIGHFCQEMAKKGCRHLVCS--SGGNAGIAAAYAARKLGI 78 (318)
T ss_dssp SCCCCEEE--EHHHHHHHTSCEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCEEEEC--CCSHHHHHHHHHHHHHTC
T ss_pred CccCCcee--hHhhHHHhCCeEEEEecCCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEE--CCchHHHHHHHHHHHcCC
Confidence 47899999 555532 789999986 799999999999999999999999976 459999999999999999
Q ss_pred cEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHH
Q 021545 118 DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGY 197 (311)
Q Consensus 118 ~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy 197 (311)
+|++|||+..+ ..|+.+++.+||+|+.++. .|++ . .+.++++.++. ..++++ ++.|+.++.||
T Consensus 79 ~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~-~~~~-----~-~~~a~~~~~~~-~~~~~~-~~~n~~~~~g~ 141 (318)
T 2rkb_A 79 PATIVLPESTS--------LQVVQRLQGEGAEVQLTGK-VWDE-----A-NLRAQELAKRD-GWENVP-PFDHPLIWKGH 141 (318)
T ss_dssp CEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHHH-----H-HHHHHHHHHST-TEEECC-SSCSHHHHHHH
T ss_pred CEEEEECCCCc--------HHHHHHHHhcCCEEEEECC-CHHH-----H-HHHHHHHHHhc-CCEEeC-CCCChhhccch
Confidence 99999999874 3589999999999999986 4653 2 23344565543 333332 33689999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC-CCCeEEEEeccCCchhhHH--H--------HHHhH
Q 021545 198 IEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYD--Y--------TQGLL 266 (311)
Q Consensus 198 ~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~-~~~rVigV~~~g~~~~~~~--~--------i~~~~ 266 (311)
.+++.||++|++ ..+|+||+|+|+|||++|++.++++.+ +++|||||++.+++.+... . +.+++
T Consensus 142 ~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a 216 (318)
T 2rkb_A 142 ASLVQELKAVLR-----TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVA 216 (318)
T ss_dssp HHHHHHHHHHSS-----SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSC
T ss_pred hHHHHHHHHhcC-----CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCcee
Confidence 999999999985 359999999999999999999999876 7899999999998654321 1 12344
Q ss_pred hhhCCCC-----------CCCCeEEeccCCccchHHHHHH
Q 021545 267 DGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 267 ~g~~~~~-----------~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
++++.+. ..++++.|+|.+.+.++..+..
T Consensus 217 ~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 256 (318)
T 2rkb_A 217 KSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLD 256 (318)
T ss_dssp GGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 5555421 2356899999988888777654
No 21
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=1e-35 Score=282.86 Aligned_cols=232 Identities=15% Similarity=0.073 Sum_probs=177.9
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC-----CEEEEeCCccchHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRA 107 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~-----~~vVt~g~s~GNhg~A 107 (311)
.+...+++|||.+ +++|++ |+|+|++|+ +||||+|++.++|.+|+++|. ++||+ +|+||||+|
T Consensus 28 ~i~~lIG~TPLv~--~~~Ls~~~G~~IylK~E~lnp--tGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~--aSsGN~g~a 101 (344)
T 3vc3_A 28 HVSQLIGRTPLVY--LNKVTEGCGAYVAVKQEMMQP--TASIADRPAYAMITDAEEKNLITPGKTTLIE--PTSGNMGIS 101 (344)
T ss_dssp SGGGGSCCCCEEE--CCSTTTTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCCTTTCEEEE--ECSSHHHHH
T ss_pred cHhhhcCCCceEE--CcccchhhCCEEEEEecCCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCCEEEE--eCCcHHHHH
Confidence 4556679999999 788876 689999998 799999999999999999874 57775 467999999
Q ss_pred HHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCC
Q 021545 108 AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 187 (311)
Q Consensus 108 lA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g 187 (311)
+|++|+.+|++|+||||+..+ ..|+.++++|||+|+.++... . .........+...+ .+. ++++.+
T Consensus 102 lA~~aa~~G~~~~IvmP~~~~--------~~k~~~~~~~GA~Vv~v~~~~-~---~~~~~~~~~~~~~~-~~~-~~~~~~ 167 (344)
T 3vc3_A 102 MAFMAAMKGYKMVLTMPSYTS--------LERRVTMRAFGAELILTDPAK-G---MGGTVKKAYELLEN-TPN-AHMLQQ 167 (344)
T ss_dssp HHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGG-H---HHHHHHHHHHHHHH-STT-EECCCT
T ss_pred HHHHHHHcCCcEEEEECCCCh--------HHHHHHHHHcCCEEEEECCCC-c---chHHHHHHHHHHhh-ccC-ceeccc
Confidence 999999999999999999875 368999999999999997532 1 11122222333333 333 345556
Q ss_pred CCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHHHHh
Q 021545 188 GSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 265 (311)
Q Consensus 188 ~~n~~~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i~~~ 265 (311)
+.||... .||.+++.||++|+. ..+|+||+|+|+||+++|++.++++..|++|||+|++.+++.+.. ......
T Consensus 168 ~~np~~~~a~~~t~g~EI~eq~~-----~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~ 242 (344)
T 3vc3_A 168 FSNPANTQVHFETTGPEIWEDTN-----GQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHH 242 (344)
T ss_dssp TTCHHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCS
T ss_pred cccchhHHHHHHHHHHHHHHHhC-----CCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCee
Confidence 6788765 457899999999985 469999999999999999999999999999999999999765421 112223
Q ss_pred HhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 266 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 266 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+.+.+.. ...|+++.|+|.+.+..+..++.
T Consensus 243 i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~ 280 (344)
T 3vc3_A 243 ITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLAL 280 (344)
T ss_dssp CTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred EecccccccCcccchhhceEEEEECHHHHHHHHHHHHH
Confidence 4455542 23688999998876666555443
No 22
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=2.8e-36 Score=287.25 Aligned_cols=245 Identities=18% Similarity=0.192 Sum_probs=188.5
Q ss_pred CCCCCchh-hhcCCCC--ccccccCCCCCCccccCCCCCC--------CCCCCCCCCCCCCCchhHHhHHHHHHHHHHcC
Q 021545 22 SYAPPSWA-SHLAPIP--SHVFSLGHFPTPIHKWNLPNLP--------HNTERDDLSGMQLSGNKVRKLEFLMADAVAQG 90 (311)
Q Consensus 22 ~~~~p~w~-~~l~~~p--~~~~~~~~~~TPL~~~~~~~Ls--------~~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G 90 (311)
+|.+-.|+ ..+..+. ..++.+.+++|||++ +++|+ -|+|+|++++ +||||+|++.+++.+|+++|
T Consensus 3 ~~~~~~~ry~~~lp~~~~~~~v~~~~g~TPL~~--~~~l~~~~g~~~~i~~K~E~~~p--tGS~KdR~a~~~l~~a~~~g 78 (352)
T 2zsj_A 3 RWQGIIKQYKKYLPVDENTPIVTLYEGNTPLIE--ADNLARAIGFKGKIYLKYEGLNP--TGSFKDRGMTLAISKAVEAG 78 (352)
T ss_dssp CCCCHHHHSGGGSSCCTTCCCCCCCCCCCCEEE--CHHHHHHHTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTT
T ss_pred cccccceeeHhhCCCccCCCceecccCCCCCee--hHHHHHHhCCCceEEEEECCCCC--CccHHHHHHHHHHHHHHhcC
Confidence 45555565 1232221 137889999999999 55442 2789999986 89999999999999999999
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHH
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNI 169 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~ 169 (311)
.++||++ |+||||+|+|++|+++|++|++|||+. .+ ..|+.+++++||+|+.++.+ |++ . .+
T Consensus 79 ~~~vv~~--SsGN~g~alA~~a~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~~-~~~-----~-~~ 141 (352)
T 2zsj_A 79 KRAVICA--STGNTSASAAAYAARAGLRAYVLLPKGAVA--------IGKLSQAMIYGAKVLAIQGT-FDD-----A-LN 141 (352)
T ss_dssp CCEEEEC--CSSHHHHHHHHHHHHHTCEEEEEEEGGGCC--------HHHHHHHHHTTCEEEEESSC-HHH-----H-HH
T ss_pred CCEEEEe--CCchHHHHHHHHHHhcCCcEEEEECCCCCC--------HHHHHHHHHcCCEEEEECCC-HHH-----H-HH
Confidence 9999974 789999999999999999999999987 54 46899999999999999873 653 2 22
Q ss_pred HHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC------CC
Q 021545 170 LKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT------LK 243 (311)
Q Consensus 170 ~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~------~~ 243 (311)
.++++.++.+ .|+++ + .|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++++.. +.
T Consensus 142 ~a~~l~~~~~-~~~~~-~-~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~ 213 (352)
T 2zsj_A 142 IVRKIGENFP-VEIVN-S-VNPYRIEGQKTAAFEICDTLG-----EAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKL 213 (352)
T ss_dssp HHHHHHHHSS-EEECS-T-TCTHHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSC
T ss_pred HHHHHHHHcC-cEECC-C-CCcchhhhHhHHHHHHHHHcC-----CCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCC
Confidence 3445555443 45564 3 789999999999999999995 358999999999999999999998753 36
Q ss_pred CeEEEEeccCCchhhHHHH----HHhHhhhCCCCC-------------CCCeEEeccCCccchHHHHHH
Q 021545 244 AKVHAFSVCDDPDYFYDYT----QGLLDGLNAGVD-------------SRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 244 ~rVigV~~~g~~~~~~~~i----~~~~~g~~~~~~-------------~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+|||||++.+++.+..... .+++++++.+.. .++++.|+|.+.+.++..+..
T Consensus 214 ~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 282 (352)
T 2zsj_A 214 PRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIAS 282 (352)
T ss_dssp CEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 8999999999765432211 235566665321 247889999888877766653
No 23
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=1e-36 Score=289.44 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=181.2
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHH-HcCCCEEEEeCCccchHHHHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAV-AQGADCIITIGGIQSNHCRAAAVA 111 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~-~~G~~~vVt~g~s~GNhg~AlA~~ 111 (311)
++....++|||++ +++|++ |+|+|++++ +||||+|++.+++.+++ +.+.++||++ |+||||+|+|++
T Consensus 33 ~i~~~i~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tGSfKdR~a~~~i~~a~~~~~~~~vv~~--ssGN~g~alA~a 106 (342)
T 2gn0_A 33 RLAGKIYKTGMPR--SNYFSERCKGEIFLKFENMQR--TGSFKIRGAFNKLSSLTEAEKRKGVVAC--SAGNHAQGVSLS 106 (342)
T ss_dssp HHTTTSCCCCCCB--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSCHHHHHTCEEEE--CSSHHHHHHHHH
T ss_pred HHhhhcCCCCceE--chhhHHHhCCEEEEEEccCCC--cCChHHHHHHHHHHHHHHhcCCCEEEEE--CCChHHHHHHHH
Confidence 5677789999999 666543 789999986 79999999999999886 3556789975 689999999999
Q ss_pred HHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCch
Q 021545 112 AKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS 191 (311)
Q Consensus 112 a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~ 191 (311)
|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. |++ ..+ .++++.++.+..|+.| +.|+
T Consensus 107 a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~-----~~~-~a~~l~~~~~~~~~~~--~~n~ 169 (342)
T 2gn0_A 107 CAMLGIDGKVVMPKGAP--------KSKVAATCDYSAEVVLHGDN-FND-----TIA-KVSEIVETEGRIFIPP--YDDP 169 (342)
T ss_dssp HHHHTCCEEEEECTTSC--------HHHHHHHHHHSCEEEECCSS-HHH-----HHH-HHHHHHHHHCCEECCS--SSSH
T ss_pred HHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHH-----HHH-HHHHHHHhcCCEEeCC--CCCH
Confidence 99999999999999864 46899999999999999864 653 222 3334444333334344 3489
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH----------H
Q 021545 192 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD----------Y 261 (311)
Q Consensus 192 ~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~----------~ 261 (311)
.+..||.+++.||++|++ .+|+||+|+|||||++|++.++++.++.+|||||++.+++.+... .
T Consensus 170 ~~~~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~ 243 (342)
T 2gn0_A 170 KVIAGQGTIGLEIMEDLY------DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRT 243 (342)
T ss_dssp HHHHHHHHHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCS
T ss_pred HHHHHHHHHHHHHHHHcC------CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCC
Confidence 999999999999999985 489999999999999999999999999999999999998754321 0
Q ss_pred HHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHHH
Q 021545 262 TQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
..+++++++.. ...|+++.|+|.+.+.++..+..
T Consensus 244 ~~t~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 288 (342)
T 2gn0_A 244 TGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQ 288 (342)
T ss_dssp SCCSCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCccccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 23456677653 12688999999988888776654
No 24
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=6.1e-36 Score=279.46 Aligned_cols=229 Identities=17% Similarity=0.162 Sum_probs=180.0
Q ss_pred cccCCCCCCccccCCCCCCC--CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC--CEEEEeCCccchHHHHHHHHHHHc
Q 021545 40 FSLGHFPTPIHKWNLPNLPH--NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA--DCIITIGGIQSNHCRAAAVAAKYL 115 (311)
Q Consensus 40 ~~~~~~~TPL~~~~~~~Ls~--~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~--~~vVt~g~s~GNhg~AlA~~a~~~ 115 (311)
+....++|||++ +++|+. |+|+|++++ +||||+|++.+++.+|+++|. ++||+ +|+||||+|+|++|+++
T Consensus 14 ~~~~~~~TPL~~--l~~l~~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~~vv~--aSsGN~g~a~A~aa~~~ 87 (303)
T 1o58_A 14 MERLIGSTPIVR--LDSIDSRIFLKLEKNNP--GGSVKDRPALFMILDAEKRGLLKNGIVE--PTSGNMGIAIAMIGAKR 87 (303)
T ss_dssp HHHHSCCCCEEE--CTTTCTTEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCTTCEEE--ECSSHHHHHHHHHHHHH
T ss_pred hhhccCCCCeEE--CccCCceEEEEecCCCC--CCChHHHHHHHHHHHHHHcCCCCCCEEE--ECchHHHHHHHHHHHHc
Confidence 345678999999 677643 899999996 899999999999999999887 67885 47899999999999999
Q ss_pred CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHH
Q 021545 116 NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT 194 (311)
Q Consensus 116 Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~ 194 (311)
|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++. +.| ++.++.|+.++
T Consensus 88 G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~~~~~~-~~~-~~~~~~n~~~~ 151 (303)
T 1o58_A 88 GHRVILTMPETMS--------VERRKVLKMLGAELVLTPGELGMKG-----AVE-KALEISRET-GAH-MLNQFENPYNV 151 (303)
T ss_dssp TCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHH-CCB-CCCTTTCHHHH
T ss_pred CCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHHhc-CeE-eCCCCCCHHHH
Confidence 9999999999864 36899999999999999863 2543 222 334444433 344 35667899886
Q ss_pred H-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCC-CeEEEEeccCCchhhH-HHHHHhHhhhCC
Q 021545 195 W-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLK-AKVHAFSVCDDPDYFY-DYTQGLLDGLNA 271 (311)
Q Consensus 195 ~-Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~-~rVigV~~~g~~~~~~-~~i~~~~~g~~~ 271 (311)
. ||.+++.||++|++ ..+|+||+|+|+|||++|++.++++.+++ +|||||++.+++.+.. +.....+++++.
T Consensus 152 ~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~ 226 (303)
T 1o58_A 152 YSHQFTTGPEILKQMD-----YQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGA 226 (303)
T ss_dssp HHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCC
T ss_pred HHHHHHHHHHHHHHcC-----CCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCC
Confidence 5 78999999999986 35999999999999999999999988888 9999999999865431 111123455543
Q ss_pred C--------CCCCCeEEeccCCccchHHHHHH
Q 021545 272 G--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 272 ~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+ ...|+++.|+|.+++.++..+..
T Consensus 227 ~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (303)
T 1o58_A 227 GFVPKILDRSVIDEVITVEDEEAYEMARYLAK 258 (303)
T ss_dssp SSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 2 12678999999988888777654
No 25
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=3.5e-35 Score=293.51 Aligned_cols=234 Identities=20% Similarity=0.118 Sum_probs=183.9
Q ss_pred ccccCCCCCCccccCCCCCC-------C-CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLP-------H-NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCR 106 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls-------~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~ 106 (311)
.+...+++|||++ +++|+ + |+|+|++++ +||||+|++.+++.+|+++|. ++||+ +|+||||+
T Consensus 53 ~i~~~ig~TPl~~--l~~l~~~~g~~~~i~~K~E~~~p--tGS~K~R~a~~~i~~a~~~g~~~~g~~vv~--~ssGN~g~ 126 (527)
T 3pc3_A 53 NILEVIGCTPLVK--LNNIPASDGIECEMYAKCEFLNP--GGSVKDRIGYRMVQDAEEQGLLKPGYTIIE--PTSGNTGI 126 (527)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHHTCCCTTCEEEE--ECSSHHHH
T ss_pred hHHhhcCCCCcEE--cchhhhhcCCCcEEEEEeccCCC--CCCHHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHH
Confidence 4566789999999 66652 2 789999998 699999999999999999997 78886 47899999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEec
Q 021545 107 AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIP 185 (311)
Q Consensus 107 AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip 185 (311)
|+|++|+.+|++|++|||+..+ ..|+.+++++||+|+.++.. .|++.. ..++ .+++++++.+..| ++
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~~~--~~~~-~a~~~~~~~~~~~-~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMS--------NEKVSALRTLGAKIIRTPTEAAYDSPE--GLIY-VAQQLQRETPNSI-VL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTSCTTSTT--SHHH-HHHHHHHHSSSEE-CC
T ss_pred HHHHHHHHhCCeEEEEEcCCCC--------HHHHHHHHHCCCEEEEeCCCCCcccHH--HHHH-HHHHHHHhCCCcE-ec
Confidence 9999999999999999999864 36899999999999999863 354321 1222 3445665544544 44
Q ss_pred CCCCchh-HHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHH--
Q 021545 186 VGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYT-- 262 (311)
Q Consensus 186 ~g~~n~~-~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i-- 262 (311)
.++.|+. ...||.+++.||++|+. ..+|+||+|+|||||++|++.+++...|++|||||++.+++.+.....
T Consensus 195 ~~~~n~~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~ 269 (527)
T 3pc3_A 195 DQYRNAGNPLAHYDGTAAEILWQLD-----NKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNK 269 (527)
T ss_dssp CTTTCTHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGC
T ss_pred CCCCCcchHHHHHHHHHHHHHHhcC-----CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcC
Confidence 5566775 35789999999999986 369999999999999999999999999999999999999875432111
Q ss_pred ----HHhHhhhCCCC--------CCCCeEEeccCCccchHHHHHH
Q 021545 263 ----QGLLDGLNAGV--------DSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 263 ----~~~~~g~~~~~--------~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
...+++++.+. ..|+++.|+|.+.+..+..+..
T Consensus 270 ~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~ 314 (527)
T 3pc3_A 270 TDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNA 314 (527)
T ss_dssp CSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHH
T ss_pred CCCCceeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHH
Confidence 11345555421 3688999999999888877654
No 26
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=4.5e-36 Score=282.58 Aligned_cols=228 Identities=16% Similarity=0.173 Sum_probs=178.5
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHH-HcCCCEEEEeCCccchHHHHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAV-AQGADCIITIGGIQSNHCRAAAVA 111 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~-~~G~~~vVt~g~s~GNhg~AlA~~ 111 (311)
++....++|||++ +++|++ |+|+|++++ +||||+|++.+++.++. +++.++||++ |+||||+|+|++
T Consensus 19 ~i~~~i~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tGS~KdRga~~~i~~~~~~~~~~~vv~~--ssGN~g~alA~~ 92 (323)
T 1v71_A 19 RIKKFANKTPVLT--SSTVNKEFVAEVFFKCENFQK--MGAFKFRGALNALSQLNEAQRKAGVLTF--SSGNHAQAIALS 92 (323)
T ss_dssp HHTTTSCCCCEEC--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHTTCCHHHHHHCEEEC--CSSHHHHHHHHH
T ss_pred HHhccCCCCCceE--hHhhHHHhCCeEEEEecCCCC--cCCHHHHHHHHHHHHHHHhcCCCeEEEe--CCCcHHHHHHHH
Confidence 4666779999999 665543 799999997 69999999999997654 2455678875 679999999999
Q ss_pred HHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCch
Q 021545 112 AKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS 191 (311)
Q Consensus 112 a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~ 191 (311)
|+.+|++|++|||+..+ ..|+.+++.+||+|+.++.. |++ . .+.+++++++.+. ++++ ++.|+
T Consensus 93 a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~-----~-~~~a~~l~~~~~~-~~i~-~~~n~ 155 (323)
T 1v71_A 93 AKILGIPAKIIMPLDAP--------EAKVAATKGYGGQVIMYDRY-KDD-----R-EKMAKEISEREGL-TIIP-PYDHP 155 (323)
T ss_dssp HHHTTCCEEEEEETTCC--------HHHHHHHHHTTCEEEEECTT-TTC-----H-HHHHHHHHHHHTC-BCCC-SSSSH
T ss_pred HHHcCCCEEEECCCCCc--------HHHHHHHHHcCCEEEEECCC-HHH-----H-HHHHHHHHHhcCC-EecC-CCCCc
Confidence 99999999999999874 35899999999999999874 543 1 2233445444333 3344 35789
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHH----------
Q 021545 192 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDY---------- 261 (311)
Q Consensus 192 ~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~---------- 261 (311)
.+..||.+++.||++|++ .+|+||+|+|||||++|++.++++.++++|||||++.+++.+....
T Consensus 156 ~~~~g~~t~~~Ei~~q~~------~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~ 229 (323)
T 1v71_A 156 HVLAGQGTAAKELFEEVG------PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDT 229 (323)
T ss_dssp HHHHHHTHHHHHHHHHHC------CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCC
T ss_pred chhhhHhHHHHHHHHhcC------CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCC
Confidence 999999999999999985 4899999999999999999999999999999999999987543221
Q ss_pred HHHhHhhhCCCC-----------CCCCeEEeccCCccchHHHHHH
Q 021545 262 TQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 i~~~~~g~~~~~-----------~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
..+++++++... ..|+++.|+|.+.+.++..+..
T Consensus 230 ~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 274 (323)
T 1v71_A 230 PKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAA 274 (323)
T ss_dssp CCCSCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 123555655421 2688999999888877776653
No 27
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=4.8e-36 Score=280.80 Aligned_cols=230 Identities=15% Similarity=0.099 Sum_probs=179.1
Q ss_pred ccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAA 112 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a 112 (311)
++....++|||++ +++|++ |+|+|++++ +||||+|.+.+++.++. +.++||++ |+||||+|+|++|
T Consensus 13 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~i~~l~--~~~~vv~~--ssGN~g~alA~~a 84 (311)
T 1ve5_A 13 RIAPYTHRTPLLT--SRLLDGLLGKRLLLKAEHLQK--TGSFKARGALSKALALE--NPKGLLAV--SSGNHAQGVAYAA 84 (311)
T ss_dssp HHGGGSCCCCEEE--CHHHHHHTTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSS--SCCCEEEE--CSSHHHHHHHHHH
T ss_pred HHhccCCCCCcee--chhhHHhhCCeEEEEecCCCC--cCCcHHHHHHHHHHHhc--CCCeEEEE--CCCcHHHHHHHHH
Confidence 5666779999999 555532 799999985 79999999999999876 66789976 5799999999999
Q ss_pred HHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchh
Q 021545 113 KYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSI 192 (311)
Q Consensus 113 ~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~ 192 (311)
+++|++|++|||+..+ ..|+++++.+||+|+.++.. |++. .+ .++++.++.+..|+.|+ .|+.
T Consensus 85 ~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~-----~~-~a~~~~~~~~~~~~~~~--~n~~ 147 (311)
T 1ve5_A 85 QVLGVKALVVMPEDAS--------PYKKACARAYGAEVVDRGVT-AKNR-----EE-VARALQEETGYALIHPF--DDPL 147 (311)
T ss_dssp HHHTCCEEEECCCC----------CCHHHHHHHTTCEEECTTCC-TTTH-----HH-HHHHHHHHHCCEECCSS--SSHH
T ss_pred HHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH-----HH-HHHHHHHhcCcEecCCC--CCcc
Confidence 9999999999999865 35899999999999998864 6542 22 23344443333343443 4899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH-----------H
Q 021545 193 GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-----------Y 261 (311)
Q Consensus 193 ~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~-----------~ 261 (311)
+..||.+++.||++|+.+. +..+|+||+|+|||||++|++.++++.++++|||||++.+++.+... .
T Consensus 148 ~~~g~~t~~~Ei~~q~~~~--~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~ 225 (311)
T 1ve5_A 148 VIAGQGTAGLELLAQAGRM--GVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAP 225 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSC
T ss_pred hhhhccHHHHHHHHHHHhc--CCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCC
Confidence 9999999999999999631 13599999999999999999999999899999999999997654321 1
Q ss_pred HHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHHH
Q 021545 262 TQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
+.++.++++.+ ...++++.|+|.+...++..+..
T Consensus 226 ~~~i~~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 270 (311)
T 1ve5_A 226 PRTRADGVRTLSLGERTFPILRERVDGILTVSEEALLEAERLLFT 270 (311)
T ss_dssp CCCSCGGGCCSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCeeeCcCCCCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 34566666642 12588999999988887776653
No 28
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=1.6e-35 Score=293.78 Aligned_cols=229 Identities=19% Similarity=0.195 Sum_probs=182.0
Q ss_pred cccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHc-CCCEEEEeCCccchHHHHHHH
Q 021545 38 HVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQ-GADCIITIGGIQSNHCRAAAV 110 (311)
Q Consensus 38 ~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~-G~~~vVt~g~s~GNhg~AlA~ 110 (311)
.++....++|||++ +++|++ |+||||+++ +||+|+|++.+++..+.++ +.++||++ |+||||+|+|+
T Consensus 23 a~i~~~i~~TPL~~--l~~Ls~~~g~~V~lK~E~lqP--tgSfKdRgA~n~i~~l~~~~~~~gVV~a--SsGNhg~avA~ 96 (514)
T 1tdj_A 23 APVYEAAQVTPLQK--MEKLSSRLDNVILVKREDRQP--VHSFKLRGAYAMMAGLTEEQKAHGVITA--SAGNHAQGVAF 96 (514)
T ss_dssp CCGGGTCCCCCEEE--CHHHHHHTTSEEEEECGGGST--TSSSTHHHHHHHHHTTTTSSCSSSCEEE--ECSSSHHHHHH
T ss_pred HhHhcccCCCCcEE--chhhHHhhCCeEEEEECCCCC--cccHHHHHHHHHHHHHHHhcCCCEEEEE--CCcHHHHHHHH
Confidence 36777889999999 665543 799999986 7999999999999887543 45678875 56999999999
Q ss_pred HHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCc
Q 021545 111 AAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN 190 (311)
Q Consensus 111 ~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n 190 (311)
+|+++|++|+||||..+| ..|+.+++.+||+|+.++. .|++ ..+ .++++.++.+..|+.|+ .|
T Consensus 97 aa~~lGi~~~IvmP~~~p--------~~Kv~~~r~~GAeVvlv~~-~~dd-----a~~-~a~ela~e~g~~~v~pf--dn 159 (514)
T 1tdj_A 97 SSARLGVKALIVMPTATA--------DIKVDAVRGFGGEVLLHGA-NFDE-----AKA-KAIELSQQQGFTWVPPF--DH 159 (514)
T ss_dssp HHHHTTCCEEEECCSSCC--------HHHHHHHHHHSCEEECCCS-SHHH-----HHH-HHHHHHHHHCCEECCSS--CC
T ss_pred HHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC-CHHH-----HHH-HHHHHHHhcCCEeeCCC--CC
Confidence 999999999999999875 3589999999999999886 4654 223 33445444334444444 47
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH----------
Q 021545 191 SIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD---------- 260 (311)
Q Consensus 191 ~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~---------- 260 (311)
+..+.|+.|++.||++|++ . +|+||+|+|+|||++|++.++|..+|++|||||++.+++.+...
T Consensus 160 p~~iaGqgTig~EI~eQl~-----~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~ 233 (514)
T 1tdj_A 160 PMVIAGQGTLALELLQQDA-----H-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLP 233 (514)
T ss_dssp HHHHHHHHHHHHHHHHHCT-----T-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCS
T ss_pred HHHHHHHHHHHHHHHHHCC-----C-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhcCCeeecC
Confidence 8888899999999999985 2 99999999999999999999999999999999999998765421
Q ss_pred HHHHhHhhhCC-----------CCCCCCeEEeccCCccchHHHHHH
Q 021545 261 YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 ~i~~~~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+..+++++++ ....|+++.|+|.+++.++..+..
T Consensus 234 ~v~tiadGiav~~~g~~~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~ 279 (514)
T 1tdj_A 234 RVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFE 279 (514)
T ss_dssp CCCSSSSTTCCSSCCCHHHHHHTTSCCEEEEECHHHHHHHHHHHHH
T ss_pred CccccccchhcCCCChHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 12334556554 134789999999999999988754
No 29
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=2.7e-34 Score=277.93 Aligned_cols=228 Identities=15% Similarity=0.132 Sum_probs=174.3
Q ss_pred CCCCCccccCCCCCC------C-CCCCCCCCCCCCCchhHHhHHHHHHHHHH------------------cCCC-EEEEe
Q 021545 44 HFPTPIHKWNLPNLP------H-NTERDDLSGMQLSGNKVRKLEFLMADAVA------------------QGAD-CIITI 97 (311)
Q Consensus 44 ~~~TPL~~~~~~~Ls------~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~------------------~G~~-~vVt~ 97 (311)
..+|||++ +++|+ + |+|+|+++.+ +||||+|++.+++.++++ ++.+ +||+
T Consensus 42 ~~~TPL~~--~~~l~~~~g~~~i~~K~E~~~~p-tgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~- 117 (398)
T 4d9i_A 42 YRPTPLCA--LDDLANLFGVKKILVKDESKRFG-LNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFAT- 117 (398)
T ss_dssp CCCCCEEE--CHHHHHHHTSSEEEEEEGGGSTT-TTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEE-
T ss_pred CCCCCcee--hHHHHHHhCCCcEEEEECCCCCC-CCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEE-
Confidence 47999999 55543 2 7899999843 799999999999998842 3456 8887
Q ss_pred CCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHc
Q 021545 98 GGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKE 177 (311)
Q Consensus 98 g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~ 177 (311)
+|+||||+|+|++|+.+|++|++|||+..+ ..|+.+++.+||+|+.++. .|++ ..+. ++++.++
T Consensus 118 -aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv~v~~-~~~~-----a~~~-a~~~~~~ 181 (398)
T 4d9i_A 118 -TTDGNHGRGVAWAAQQLGQNAVIYMPKGSA--------QERVDAILNLGAECIVTDM-NYDD-----TVRL-TMQHAQQ 181 (398)
T ss_dssp -ECSSHHHHHHHHHHHHHTCEEEEEECTTCC--------HHHHHHHHTTTCEEEECSS-CHHH-----HHHH-HHHHHHH
T ss_pred -ECCCHHHHHHHHHHHHcCCCEEEEEeCCCC--------HHHHHHHHHcCCEEEEECC-CHHH-----HHHH-HHHHHHH
Confidence 478999999999999999999999999864 3689999999999999987 4653 2232 3344443
Q ss_pred CCCcEEecC----CCC--chhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhC--CCCCeEEEE
Q 021545 178 GRRPYVIPV----GGS--NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG--TLKAKVHAF 249 (311)
Q Consensus 178 g~~~y~ip~----g~~--n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~--~~~~rVigV 249 (311)
. ..|+++. ++. ++..+.||.+++.||++|+... +..+|+||+|+|+|||++|++.++++. .+.+|||||
T Consensus 182 ~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~--g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigV 258 (398)
T 4d9i_A 182 H-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREM--GVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIV 258 (398)
T ss_dssp H-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHT--TCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred c-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhc--CCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 3 3566664 344 3677899999999999999741 234999999999999999999999765 478999999
Q ss_pred eccCCchhhHH-----------HHHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHH
Q 021545 250 SVCDDPDYFYD-----------YTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNIL 294 (311)
Q Consensus 250 ~~~g~~~~~~~-----------~i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~ 294 (311)
++.+++.+... .+.++.++++.+ ...|+++.|+|.+++..+..+.
T Consensus 259 ep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~ 325 (398)
T 4d9i_A 259 EPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLG 325 (398)
T ss_dssp EETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHH
T ss_pred EeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHH
Confidence 99998765321 345667777642 1268899999988887776554
No 30
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=3.8e-34 Score=279.58 Aligned_cols=234 Identities=17% Similarity=0.119 Sum_probs=176.9
Q ss_pred ccccCCCCCCccccCCCCCC-------C-CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCC----CEEEEeCCccchHHH
Q 021545 39 VFSLGHFPTPIHKWNLPNLP-------H-NTERDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCR 106 (311)
Q Consensus 39 ~~~~~~~~TPL~~~~~~~Ls-------~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~----~~vVt~g~s~GNhg~ 106 (311)
++...+++|||++ +++|+ + |+|+|++++ +||||+|++.+++.+|+++|. ++||++ |+||||+
T Consensus 101 ~i~~~ig~TPLv~--l~~Ls~~~G~~~~v~lK~E~~np--tGSfKdR~a~~~i~~a~~~G~l~~g~tVV~a--SsGN~G~ 174 (435)
T 1jbq_A 101 DILKKIGDTPMVR--INKIGKKFGLKCELLAKCEFFNA--GGSVKDRISLRMIEDAERDGTLKPGDTIIEP--TSGNTGI 174 (435)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHHTCSCTTCEEEEE--CSSHHHH
T ss_pred HHHhhCCCCCeEE--CcchhhHhCCCceEEEEECCCCC--cCCHHHHHHHHHHHHHHHcCCCCCCCEEEEe--CCCHHHH
Confidence 4566789999999 66553 2 789999986 799999999999999999885 678864 6799999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEec
Q 021545 107 AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIP 185 (311)
Q Consensus 107 AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip 185 (311)
|+|++|+.+|++|+||||+..+ ..|+.+++++||+|+.++.. .|++... . .+.+++++++.++.|+++
T Consensus 175 AlA~aaa~~Gi~~~IvmP~~~s--------~~k~~~l~~~GAeVv~v~~~~~~d~~~~--~-~~~a~~la~~~~~~~~i~ 243 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIVMPEKMS--------SEKVDVLRALGAEIVRTPTNARFDSPES--H-VGVAWRLKNEIPNSHILD 243 (435)
T ss_dssp HHHHHHHHHTCEEEEEECSCCC--------HHHHHHHHHTTCEEEECCC-------CC--H-HHHHHHHHHHSTTEECCC
T ss_pred HHHHHHHHcCCeEEEEeCCCCC--------HHHHHHHHhCCCEEEEecCCCCcchHHH--H-HHHHHHHHHhcCCeEEeC
Confidence 9999999999999999999874 35899999999999999753 3543211 2 223445666555566654
Q ss_pred CCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHH---
Q 021545 186 VGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDY--- 261 (311)
Q Consensus 186 ~g~~n~~~-~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~--- 261 (311)
++.|+.+ ..||.+++.||++|+. ..+|+||+|+|+|||++|++.++++..|++|||||++.+++.+....
T Consensus 244 -q~~n~~n~~ag~~t~a~EI~eQl~-----~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~ 317 (435)
T 1jbq_A 244 -QYRNASNPLAHYDTTADEILQQCD-----GKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQ 317 (435)
T ss_dssp -TTTCTHHHHHHHHTHHHHHHHHHT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGC
T ss_pred -ccCCcccHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhc
Confidence 3445543 3578899999999995 36899999999999999999999998999999999999986432110
Q ss_pred ---HHHhHhhhCCC--------CCCCCeEEeccCCccchHHHHHH
Q 021545 262 ---TQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 262 ---i~~~~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
....+++++.+ ...|+++.|+|.+.+.++..+..
T Consensus 318 ~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~ 362 (435)
T 1jbq_A 318 TEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIA 362 (435)
T ss_dssp CSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCcceeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHH
Confidence 01234455532 12678999999888877766653
No 31
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=3.7e-34 Score=280.50 Aligned_cols=238 Identities=13% Similarity=0.132 Sum_probs=180.2
Q ss_pred ccccccCCCCCCccccCCCCCC------------C--CCCCCCCCCCCCCchhHHhHHHHHHH-----HHHcCC------
Q 021545 37 SHVFSLGHFPTPIHKWNLPNLP------------H--NTERDDLSGMQLSGNKVRKLEFLMAD-----AVAQGA------ 91 (311)
Q Consensus 37 ~~~~~~~~~~TPL~~~~~~~Ls------------~--~vKRedl~~~~~ggnK~Rkl~~ll~~-----a~~~G~------ 91 (311)
.++..+++++|||++ +++|+ . |+|+|++++. +||||+|++.+++.. |+++|.
T Consensus 69 ~~~~~~g~~~TPL~~--~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~-tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~ 145 (442)
T 3ss7_X 69 ETAATGGIIESELVA--IPAMQKRLEKEYQQPISGQLLLKKDSHLPI-SGSIKARGGIYEVLAHAEKLALEAGLLTLDDD 145 (442)
T ss_dssp GGGGGTTCCCCCEEE--CHHHHHHHHHHHTCCCCSEEEEEEGGGCTT-TSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSC
T ss_pred hhhccCCCCCCCcEE--hHhhhhHHHHhhCCCcCCeEEEeecCCCCC-CCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcc
Confidence 334556778999999 56543 2 7899999863 699999999998875 778885
Q ss_pred ---------------CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc
Q 021545 92 ---------------DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE 156 (311)
Q Consensus 92 ---------------~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~ 156 (311)
.+||+ +|+||||+|+|++|+++|++|+||||...+ ..|+.+++.+||+|+.++.
T Consensus 146 ~~~l~~~~~r~~~~~~~vv~--aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~--------~~k~~~~r~~GA~Vv~v~~- 214 (442)
T 3ss7_X 146 YSKLLSPEFKQFFSQYSIAV--GSTGNLGLSIGIMSARIGFKVTVHMSADAR--------AWKKAKLRSHGVTVVEYEQ- 214 (442)
T ss_dssp GGGGGSHHHHHHHHTSEEEE--ECSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEESS-
T ss_pred hhhhhhhhhhhhccCcEEEE--ECCCHHHHHHHHHHHHhCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC-
Confidence 36775 477999999999999999999999999875 3689999999999999987
Q ss_pred cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCC---CCCCCeEEEeCCcchhHHHH
Q 021545 157 EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTG---GVKFDDIVVACGSGGTIAGL 233 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~---~~~~D~ivv~vGtGGt~aGl 233 (311)
.|++ ..+ .++++.++.+..|+++. ..++....||.+++.||.+|+.+.+. +..||+||+|+|+||+++|+
T Consensus 215 ~~~~-----a~~-~a~~~a~~~~~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi 287 (442)
T 3ss7_X 215 DYGV-----AVE-EGRKAAQSDPNCFFIDD-ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGV 287 (442)
T ss_dssp CHHH-----HHH-HHHHHHHTCTTEEECCT-TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHH
T ss_pred CHHH-----HHH-HHHHHHHhCCCceeCCC-CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHH
Confidence 4653 223 34455555545677665 22345679999999999999974210 12356999999999999999
Q ss_pred HHHHhhC-CCCCeEEEEeccCCchhhHHH----------------HHHhHhhhCCC-----------CCCCCeEEeccCC
Q 021545 234 SLGSWLG-TLKAKVHAFSVCDDPDYFYDY----------------TQGLLDGLNAG-----------VDSRDIVNIQNVS 285 (311)
Q Consensus 234 ~~~~~~~-~~~~rVigV~~~g~~~~~~~~----------------i~~~~~g~~~~-----------~~~~dvv~v~e~~ 285 (311)
+.++++. ++++|||||++.+++.+.... ..+++++++++ ...|+++.|+|.+
T Consensus 288 ~~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~~~~d~~~~Vsd~e 367 (442)
T 3ss7_X 288 AFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQT 367 (442)
T ss_dssp HHHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHGGGCCEEEEECHHH
T ss_pred HHHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHHhhCCeEEEECHHH
Confidence 9999986 899999999999988643211 12233444441 2368899999999
Q ss_pred ccchHHHHHH
Q 021545 286 VYMTFKNILM 295 (311)
Q Consensus 286 ~~~~~~~~~~ 295 (311)
++..+..+..
T Consensus 368 ~~~a~~~L~~ 377 (442)
T 3ss7_X 368 MYDMLGWLAQ 377 (442)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888877654
No 32
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=5.2e-35 Score=280.07 Aligned_cols=233 Identities=18% Similarity=0.184 Sum_probs=179.4
Q ss_pred CCCccccccCCCCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHH-cCCCEEEEeCCccchHHH
Q 021545 34 PIPSHVFSLGHFPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVA-QGADCIITIGGIQSNHCR 106 (311)
Q Consensus 34 ~~p~~~~~~~~~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~-~G~~~vVt~g~s~GNhg~ 106 (311)
.++..++....++|||++ +++|++ |+|+|++++ +||||+|.+.+++..+.+ .+.++||++ |+||||+
T Consensus 48 ~i~~~~i~~~i~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tgSfKdRga~~~i~~l~~~~~~~~vv~a--ssGN~g~ 121 (366)
T 3iau_A 48 DILASPVYDVAIESPLEL--AEKLSDRLGVNFYIKREDKQR--VFSFKLRGAYNMMSNLSREELDKGVITA--SAGNHAQ 121 (366)
T ss_dssp HHHHCCGGGTCCCCCEEE--CHHHHHHHTSEEEEEEGGGST--TSBTTHHHHHHHHHTSCHHHHHHCEEEE--CSSHHHH
T ss_pred HHHHHHHhhhcCCCCcEE--hhhhhHhhCCEEEEEecCCCC--CcchHHHHHHHHHHHHHHhCCCCEEEEe--CCCHHHH
Confidence 344456778889999999 666543 899999996 799999999999887533 334668876 4599999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecC
Q 021545 107 AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPV 186 (311)
Q Consensus 107 AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~ 186 (311)
|+|++|+++|++|++|||+..+ ..|+..++.+||+|+.++. .|++ +.+. ++++.++.+..|+.|
T Consensus 122 a~A~aa~~~G~~~~iv~P~~~~--------~~k~~~~~~~GA~V~~v~~-~~~~-----~~~~-a~~~~~~~~~~~i~~- 185 (366)
T 3iau_A 122 GVALAGQRLNCVAKIVMPTTTP--------QIKIDAVRALGGDVVLYGK-TFDE-----AQTH-ALELSEKDGLKYIPP- 185 (366)
T ss_dssp HHHHHHHHTTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHHH-----HHHH-HHHHHHHHTCEECCS-
T ss_pred HHHHHHHHhCCceEEEeCCCCC--------HHHHHHHHHCCCeEEEECc-CHHH-----HHHH-HHHHHHhcCCEecCC-
Confidence 9999999999999999999764 3579999999999999985 4654 2232 334444333334443
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHH------
Q 021545 187 GGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD------ 260 (311)
Q Consensus 187 g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~------ 260 (311)
+.|+..+.||.+++.||++|+. .+|+||+|+|+|||++|++.+++..++++||+||++.+++.+...
T Consensus 186 -~~n~~~i~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~~ 258 (366)
T 3iau_A 186 -FDDPGVIKGQGTIGTEINRQLK------DIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHR 258 (366)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHCC------SEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSC
T ss_pred -CCChHHHHHHHHHHHHHHHhcC------CCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCCC
Confidence 4578888999999999999983 599999999999999999999999999999999999998654321
Q ss_pred ----HHHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHHH
Q 021545 261 ----YTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 ----~i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
.+..++++++.. ...++++.|+|.+++.++..+..
T Consensus 259 ~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 308 (366)
T 3iau_A 259 VKLSNVDTFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYD 308 (366)
T ss_dssp CEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CcCCCccchhhhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHH
Confidence 122345566542 12578999999988888776653
No 33
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-33 Score=271.35 Aligned_cols=237 Identities=16% Similarity=0.123 Sum_probs=169.3
Q ss_pred CCCCCCccccCCCCCCC-------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHc
Q 021545 43 GHFPTPIHKWNLPNLPH-------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL 115 (311)
Q Consensus 43 ~~~~TPL~~~~~~~Ls~-------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~ 115 (311)
...+|||++ +++|++ |+||||+++ +||||+|++.+++..+.++|.+.+|++ +|+||||+|+|++|+++
T Consensus 74 ig~~TPL~~--~~~Ls~~~gg~~i~lK~E~l~p--tGSfK~R~a~~~i~~a~~~g~~~vI~~-~ssGNhg~avA~aaa~~ 148 (418)
T 1x1q_A 74 AGRPTPLYH--AKRLSEYWGGAQVFLKREDLLH--TGAHKINNTLGQALLARRMGKRRVIAE-TGAGQHGVSVATVAALF 148 (418)
T ss_dssp TCCSCCEEE--CHHHHHHHTSSEEEEEEGGGSG--GGBTTHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHHHHHHH
T ss_pred cCCCCCcEE--hHHhHhhcCCceEEEEEccCCc--CccHHHHHHHHHHHHHHHcCCCEEEEe-cCchHHHHHHHHHHHHc
Confidence 336799999 665532 789999998 799999999999988888888888764 45699999999999999
Q ss_pred CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC--ccccccCcHHHHHHHHHHHHHcCCCcEEecCCCC--ch
Q 021545 116 NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK--EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS--NS 191 (311)
Q Consensus 116 Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~--~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~--n~ 191 (311)
|++|+||||+.... ....|+.+++.+||+|+.++. +.|++ ..+.+.+.+.++.++.+++..++. +|
T Consensus 149 Gi~~~I~mp~~~~~-----~~~~kv~~~~~~GA~Vv~v~~~~~~~~~-----a~~~a~~~~~~~~~~~~~i~~~~~n~~p 218 (418)
T 1x1q_A 149 GLECVVYMGEEDVR-----RQALNVFRMKLLGAEVRPVAAGSRTLKD-----ATNEAIRDWITNVRTTFYILGSVVGPHP 218 (418)
T ss_dssp TCEEEEEEEHHHHH-----TCHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHTTTTEEECCCCSSSSTT
T ss_pred CCCEEEEECCCcch-----hhhHHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHHhCCCcEEEeCCccCCCC
Confidence 99999999975321 013578999999999999985 23443 223333444554334444443433 33
Q ss_pred h--HH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCCchh-------hH-
Q 021545 192 I--GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDPDY-------FY- 259 (311)
Q Consensus 192 ~--~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~~~~-------~~- 259 (311)
. .+ .||.+++.||.+|+.+.. +..+|+||+|+|+||+++|++.++|.+ ++++|||||++.+++.+ +.
T Consensus 219 ~~~~v~~gq~t~~~Ei~~Ql~~~~-~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~ 297 (418)
T 1x1q_A 219 YPMMVRDFQSVIGEEVKRQSLELF-GRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGA 297 (418)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHH-SSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhc-CCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHc
Confidence 3 23 488899999999995310 135899999999999999999999876 89999999999997421 10
Q ss_pred ---------------------HHHHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHHH
Q 021545 260 ---------------------DYTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 260 ---------------------~~i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
....++.+++..+ ...++++.|+|.+++.++..+..
T Consensus 298 G~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~ 365 (418)
T 1x1q_A 298 GKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLAR 365 (418)
T ss_dssp TCEEEETTEEEEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHH
T ss_pred CCeeeeccccccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHH
Confidence 1123444554431 12478999999999888877654
No 34
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=99.97 E-value=1.2e-31 Score=258.54 Aligned_cols=223 Identities=13% Similarity=0.031 Sum_probs=165.1
Q ss_pred CCCCccccCCCCCCC-----CCCCCCCCCCCCCchhHHhHHHHHHH---HHHcCCCEEEEeCCccchHHHHHHHHHHHcC
Q 021545 45 FPTPIHKWNLPNLPH-----NTERDDLSGMQLSGNKVRKLEFLMAD---AVAQGADCIITIGGIQSNHCRAAAVAAKYLN 116 (311)
Q Consensus 45 ~~TPL~~~~~~~Ls~-----~vKRedl~~~~~ggnK~Rkl~~ll~~---a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~G 116 (311)
.+|||++ +++|++ |+||||+++. +||||+|++.+++.. +++.| ++||+ +|+||||+|+|++|+++|
T Consensus 95 ~~TPL~~--l~~Ls~~g~~IylK~E~lnp~-tGS~K~R~a~~~i~~l~~a~~~g-~~Iv~--assGNhG~AlA~aaa~~G 168 (389)
T 1wkv_A 95 KPTPLVR--SRLQLPNGVRVWLKLEWYNPF-SLSVKDRPAVEIISRLSRRVEKG-SLVAD--ATSSNFGVALSAVARLYG 168 (389)
T ss_dssp CSCCEEE--CCCCCSTTEEEEEEEGGGSTT-TSBTTHHHHHHHHHHHTTTSCTT-CEEEE--ECCHHHHHHHHHHHHHTT
T ss_pred CCCCeEE--ccccccCCCeEEEEEcCCCCC-cCChHHHHHHHHHHHHHHHHhcC-CEEEE--ECCcHHHHHHHHHHHHcC
Confidence 6899999 777764 7899999863 689999999999998 66667 77774 578999999999999999
Q ss_pred CcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE-EEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHH-
Q 021545 117 LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE-LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT- 194 (311)
Q Consensus 117 l~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~-~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~- 194 (311)
++|++|||+..+ ..|+.+++++||+|+ .++.+.|++. ++.+. ++.++.+..|++| +.|+.+.
T Consensus 169 l~~~ivmp~~~~--------~~k~~~~~~~GAeVv~~v~~~~~~da-----~~~a~-~~~~~~g~~~~~p--~~N~~~~~ 232 (389)
T 1wkv_A 169 YRARVYLPGAAE--------EFGKLLPRLLGAQVIVDPEAPSTVHL-----LPRVM-KDSKNEGFVHVNQ--FYNDANFE 232 (389)
T ss_dssp CEEEEEEETTSC--------HHHHHHHHHTTCEEEEETTCSSSGGG-----HHHHH-HHHHHHCCEECCT--TTCHHHHH
T ss_pred CeEEEEECCCCC--------HHHHHHHHHcCCEEEEEcCCCCHHHH-----HHHHH-HHHHccCcEecCc--CCChHHHH
Confidence 999999999864 357889999999999 7774456542 23333 2333222333333 3455543
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhH-HHH---HHhHhhhC
Q 021545 195 WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYT---QGLLDGLN 270 (311)
Q Consensus 195 ~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~-~~i---~~~~~g~~ 270 (311)
.||.+++.||.+|+.+. +..||+||+|+|||||++|++.+++...+++|||||++.+...... ..+ ..++.
T Consensus 233 ~~~~t~g~Ei~~Q~~~~--g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~Gi~~i~~~~~~~~--- 307 (389)
T 1wkv_A 233 AHMRGTAREIFVQSRRG--GLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWIN--- 307 (389)
T ss_dssp HHHHTHHHHHHHHHHHT--TCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHH---
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCccccccccCCcchhhh---
Confidence 56778999999999742 2469999999999999999999999988999999999998642100 000 00110
Q ss_pred CCCCCC-CeEEeccCCccchHHHHHH
Q 021545 271 AGVDSR-DIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 271 ~~~~~~-dvv~v~e~~~~~~~~~~~~ 295 (311)
....| +++.|+|.+.+.++..+..
T Consensus 308 -~~~~dg~~~~Vsd~ea~~a~~~l~~ 332 (389)
T 1wkv_A 308 -MLDISYTLAEVTLEEAMEAVVEVAR 332 (389)
T ss_dssp -HSCCCCEEEEECHHHHHHHHHHHHH
T ss_pred -hheeccEEEEECHHHHHHHHHHHHH
Confidence 12346 8999999888877766643
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.97 E-value=2.3e-32 Score=263.16 Aligned_cols=234 Identities=16% Similarity=0.094 Sum_probs=170.3
Q ss_pred CCCCccccCCCCCC------C-CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCC
Q 021545 45 FPTPIHKWNLPNLP------H-NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNL 117 (311)
Q Consensus 45 ~~TPL~~~~~~~Ls------~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl 117 (311)
.+|||++ +++|+ + |+|+|++++ +||||+|++.+++..++++|.+++|+. +|+||||+|+|++|+++|+
T Consensus 49 ~~TPL~~--~~~l~~~~g~~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~vv~~-~ssGN~g~a~A~aa~~~G~ 123 (388)
T 1v8z_A 49 RPTPLYY--AKRLTEKIGGAKIYLKREDLVH--GGAHKTNNAIGQALLAKFMGKTRLIAE-TGAGQHGVATAMAGALLGM 123 (388)
T ss_dssp CSCCEEE--CHHHHHHHTSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHTTC
T ss_pred CCCCcee--hHhhHhhcCCceEEEEeccCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEe-cCchHHHHHHHHHHHHcCC
Confidence 4699999 56543 2 789999986 799999999999999888998888863 3569999999999999999
Q ss_pred cEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc--cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCch--h-
Q 021545 118 DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS--I- 192 (311)
Q Consensus 118 ~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~--~- 192 (311)
+|++|||+.... ..+.|+.+++.+||+|+.++.. .|++ ..+.+.+.+.++.++.++++.++.|+ .
T Consensus 124 ~~~iv~p~~~~~-----~~~~~~~~~~~~GA~V~~~~~~~~~~~~-----a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 193 (388)
T 1v8z_A 124 KVDIYMGAEDVE-----RQKMNVFRMKLLGANVIPVNSGSRTLKD-----AINEALRDWVATFEYTHYLIGSVVGPHPYP 193 (388)
T ss_dssp EEEEEEEHHHHT-----TCHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred cEEEEEcCCchh-----hhhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHHhCCCceEecCCccCCCCch
Confidence 999999985211 1135789999999999999752 3432 22333334444433456676665443 2
Q ss_pred -HH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchh-------hHH---
Q 021545 193 -GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDY-------FYD--- 260 (311)
Q Consensus 193 -~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~-------~~~--- 260 (311)
.+ .||.+++.||++|+.+.. +..+|+||+|+|||||++|++.+++. ++.+|||||++.++..+ +..
T Consensus 194 ~~~~~~~~t~~~Ei~~q~~~~~-~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~~~~~~~~~~l~~g~~ 271 (388)
T 1v8z_A 194 TIVRDFQSVIGREAKAQILEAE-GQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKGLESGKHSASLNAGQV 271 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-SSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHCEE
T ss_pred hHHHHHhHHHHHHHHHHHHHhc-CCCCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccccchhhhhHHHhcCCc
Confidence 22 378899999999995210 13589999999999999999999984 89999999999997542 110
Q ss_pred -------------------HHHHhHhhhCC-----------CCCCCCeEEeccCCccchHHHHHH
Q 021545 261 -------------------YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 -------------------~i~~~~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
...++.+++.. +...++++.|+|.+++.++..+..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 336 (388)
T 1v8z_A 272 GVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSR 336 (388)
T ss_dssp EEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHH
T ss_pred eeccccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHH
Confidence 01223333332 123478999999988888777654
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.97 E-value=4.1e-31 Score=255.38 Aligned_cols=233 Identities=17% Similarity=0.117 Sum_probs=170.3
Q ss_pred CCCCccccCCCCCCC------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCc
Q 021545 45 FPTPIHKWNLPNLPH------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLD 118 (311)
Q Consensus 45 ~~TPL~~~~~~~Ls~------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~ 118 (311)
.+|||++ +++|++ |+||||+++ +||+|+|.+.+++..|+++|.++||+. +|+||||+|+|++|+++|++
T Consensus 54 ~~TPL~~--~~~l~~~~g~~i~lK~E~l~p--tGSfK~R~a~~~~~~a~~~g~~~vi~e-~ssGNhg~a~A~aa~~~G~~ 128 (396)
T 1qop_B 54 RPTALTK--CQNITAGTRTTLYLKREDLLH--GGAHKTNQVLGQALLAKRMGKSEIIAE-TGAGQHGVASALASALLGLK 128 (396)
T ss_dssp CSCCEEE--CHHHHTTSSEEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHHTCE
T ss_pred CCCCcEE--hhhhhhccCCeEEEEeccCCC--CCcHHHHHHHHHHHHHHHcCcCEEEEe-cCchHHHHHHHHHHHHCCCc
Confidence 4799999 565543 789999997 799999999999999999999888873 35699999999999999999
Q ss_pred EEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEEEcCc--cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCc--hh-
Q 021545 119 CYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN--SI- 192 (311)
Q Consensus 119 ~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n--~~- 192 (311)
|+||||+. .+. .+.|+.+++++||+|+.++.+ .|++ ..+.+.+.+.++.++.++++.++.| |.
T Consensus 129 ~~i~mp~~~~~~------~~~~~~~~~~~GA~V~~v~~~~~~~~~-----a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 197 (396)
T 1qop_B 129 CRIYMGAKDVER------QSPNVFRMRLMGAEVIPVHSGSATLKD-----ACNEALRDWSGSYETAHYMLGTAAGPHPYP 197 (396)
T ss_dssp EEEEEEHHHHHH------CHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred EEEEEcCCchhh------hhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHhccCCcEEEeCCcCCCCCch
Confidence 99999985 321 135789999999999999752 3432 2233333334443345566655433 32
Q ss_pred -HHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchh-------hHH---
Q 021545 193 -GTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDY-------FYD--- 260 (311)
Q Consensus 193 -~~~-Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~-------~~~--- 260 (311)
.+. ||.+++.||.+|+.+. .+..+|+||+|+|+||+++|++.+++ .++.+|||||++.++..+ +..
T Consensus 198 ~~v~~g~~t~~~Ei~~Ql~~~-~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~ 275 (396)
T 1qop_B 198 TIVREFQRMIGEETKAQILDK-EGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRV 275 (396)
T ss_dssp HHHHHTTTHHHHHHHHHHHHH-HSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEE
T ss_pred HHHHHHHhHHHHHHHHHHHHh-cCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCe
Confidence 233 6789999999999421 01469999999999999999999998 489999999999987521 111
Q ss_pred -------------------HHHHhHhhhCCC-----------CCCCCeEEeccCCccchHHHHHH
Q 021545 261 -------------------YTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 295 (311)
Q Consensus 261 -------------------~i~~~~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 295 (311)
...++.+++..+ ...++++.|+|.+.+.++..+..
T Consensus 276 ~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~ 340 (396)
T 1qop_B 276 GIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCR 340 (396)
T ss_dssp EEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHH
T ss_pred eeeccchhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHH
Confidence 012233343321 23588999999988888776653
No 37
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.97 E-value=1.6e-30 Score=253.40 Aligned_cols=195 Identities=18% Similarity=0.156 Sum_probs=146.1
Q ss_pred CCCCCCccccCCCCCCC-------CCCCCCCCCCCCCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHc
Q 021545 43 GHFPTPIHKWNLPNLPH-------NTERDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL 115 (311)
Q Consensus 43 ~~~~TPL~~~~~~~Ls~-------~vKRedl~~~~~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~ 115 (311)
...+|||++ +++|++ |+||||+++ +||+|+|.+.+++..|++.|.+.+|+. +++||||+|+|++|+++
T Consensus 78 ~g~~TPL~~--~~~Ls~~~gg~~i~lK~E~lnp--tGSfK~R~a~~~~~~a~~~g~~~vI~~-~ssGNhG~A~A~aaa~~ 152 (422)
T 2o2e_A 78 AGRPSPLYE--ATRLSQHAGSARIFLKREDLNH--TGSHKINNVLGQALLARRMGKTRVIAE-TGAGQHGVATATACALL 152 (422)
T ss_dssp SSCSCCEEE--CGGGGGGTTTCEEEEECGGGCC--SSTTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHH
T ss_pred CCCCCCeEE--ChhhHhhcCCCeEEEEEcCCCC--CCcHHHHHHHHHHHHHHHcCCCeEEEe-cCccHHHHHHHHHHHHc
Confidence 346799999 666543 789999998 799999999999988888898877753 35699999999999999
Q ss_pred CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc--cccccCcHHHHHHHHHHHHHcCCCcEEecCCC--Cch
Q 021545 116 NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGG--SNS 191 (311)
Q Consensus 116 Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~--~n~ 191 (311)
|++|+||||...... ...|+.+++++||+|+.++.+ .|++ ..+.+.+.+.++.++.+++..++ ++|
T Consensus 153 G~~~~I~mp~~~~~~-----q~~kv~~~~~~GA~Vv~v~~~~~~~~d-----a~~~a~~~~~~~~~~~~yi~~s~~g~~p 222 (422)
T 2o2e_A 153 GLDCVIYMGGIDTAR-----QALNVARMRLLGAEVVAVQTGSKTLKD-----AINEAFRDWVANADNTYYCFGTAAGPHP 222 (422)
T ss_dssp TCEEEEEEEHHHHHH-----SHHHHHHHHHTTCEEEEECSTTSCHHH-----HHHHHHHHHHHHTTTEEECCCCSSSCCC
T ss_pred CCcEEEEeCCCcchh-----hHHHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHhcCCCcEEEeCCccCCCC
Confidence 999999999853210 135889999999999999752 3432 22333334444433444443332 233
Q ss_pred h--HH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCC
Q 021545 192 I--GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 254 (311)
Q Consensus 192 ~--~~-~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~ 254 (311)
. .+ .|+.+++.||.+|+.+. .+..||+||+|+|+||+++|++.+++. ++.+|||||++.++
T Consensus 223 ~~~~v~~~q~t~g~Ei~~Ql~~~-~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~ 286 (422)
T 2o2e_A 223 FPTMVRDFQRIIGMEARVQIQGQ-AGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGD 286 (422)
T ss_dssp CHHHHHHHTTHHHHHHHHHHHHH-SSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh-hCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCC
Confidence 2 23 36789999999998531 124589999999999999999888864 78999999999986
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.96 E-value=1.2e-29 Score=251.07 Aligned_cols=226 Identities=12% Similarity=0.053 Sum_probs=166.4
Q ss_pred cccCCCCCCccccCCCCC-------CC-CCCCCCCCCCCCCchhHHhHHHHHHHHHH---c--CCCEEEEeCCccchHHH
Q 021545 40 FSLGHFPTPIHKWNLPNL-------PH-NTERDDLSGMQLSGNKVRKLEFLMADAVA---Q--GADCIITIGGIQSNHCR 106 (311)
Q Consensus 40 ~~~~~~~TPL~~~~~~~L-------s~-~vKRedl~~~~~ggnK~Rkl~~ll~~a~~---~--G~~~vVt~g~s~GNhg~ 106 (311)
+.+..++|||++ +++| .+ |+|+|++++ +||||+|++.+++..+.. + |.++||+ +|+||||+
T Consensus 124 v~l~~g~TPLv~--l~~L~~~~lg~~~l~~K~E~~nP--TGSFKDRga~~~~~~l~~~~~~~~g~~~Vv~--aSsGNtG~ 197 (486)
T 1e5x_A 124 VSAFEGNSNLFW--AERFGKQFLGMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGC--ASTGDTSA 197 (486)
T ss_dssp CCCCCCCCCEEE--CHHHHHHHHCCSSEEEEETTSST--TSBTTHHHHHHHHHHHHHHHHTTCCCCEEEE--CCCSHHHH
T ss_pred ccccCCCCCcEE--CcccchhhcCCCcEEEeeccCCC--ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEE--cCCCHHHH
Confidence 567788999999 4432 12 889999997 799999998887766543 3 5678885 57899999
Q ss_pred HHHHHHHHcCCcEEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEec
Q 021545 107 AAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP 185 (311)
Q Consensus 107 AlA~~a~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip 185 (311)
|+|++|+++|++|+||+|+. .+ ..|+.+++.+||+|+.++.. |++. .+.++++.++. ..|+++
T Consensus 198 AlA~~a~~~Gi~~~I~~P~~~~s--------~~k~~~~~~~GA~vi~v~g~-~dd~------~~~a~~l~~~~-~~~~vn 261 (486)
T 1e5x_A 198 ALSAYCASAGIPSIVFLPANKIS--------MAQLVQPIANGAFVLSIDTD-FDGC------MKLIREITAEL-PIYLAN 261 (486)
T ss_dssp HHHHHHHHHTCCEEEEEEGGGCC--------HHHHHHHHHTTCEEEEEESC-HHHH------HHHHHHHHHHS-CEEEGG
T ss_pred HHHHHHHHcCCeEEEEECCCCCC--------HHHHHHHHhCCCEEEEECCC-HHHH------HHHHHHHHhcC-CEEEeC
Confidence 99999999999999999986 64 35789999999999999864 6542 23344555443 356665
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhC---C---CCCeEEEEeccCCchhhH
Q 021545 186 VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG---T---LKAKVHAFSVCDDPDYFY 259 (311)
Q Consensus 186 ~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~---~---~~~rVigV~~~g~~~~~~ 259 (311)
. .|+..+.||.+++.||++|+.. ..+|+||+|+|+||+++|++.++++. + +.+|||+|++.+......
T Consensus 262 s--~N~~~i~gq~t~~~Ei~~ql~~----~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~ 335 (486)
T 1e5x_A 262 S--LNSLRLEGQKTAAIEILQQFDW----QVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYL 335 (486)
T ss_dssp G--SHHHHHHHHTHHHHHHHHHTTS----CCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHH
T ss_pred C--CCHHHHHHHHHHHHHHHHHcCC----CCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHH
Confidence 3 3999999999999999999851 35899999999999999999998864 3 788999999997654221
Q ss_pred ------------HHHHHhHhhhCCCC---------CCCC----eEEeccCCccchHHHHH
Q 021545 260 ------------DYTQGLLDGLNAGV---------DSRD----IVNIQNVSVYMTFKNIL 294 (311)
Q Consensus 260 ------------~~i~~~~~g~~~~~---------~~~d----vv~v~e~~~~~~~~~~~ 294 (311)
....+++++++.+. ..++ ++.|+|.++..++. ++
T Consensus 336 ~~~~G~~~~~~~~~~~t~a~gi~i~~p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~ 394 (486)
T 1e5x_A 336 HYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMA-QA 394 (486)
T ss_dssp HHHTTTTTCCC----------------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HH
T ss_pred HHHcCCCccccCCCCCeeCccccCCCCccHHHHHHHHhccCCeEEEECHHHHHHHHH-HH
Confidence 11345677776531 1345 88888888888877 44
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.93 E-value=7.2e-27 Score=227.98 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=156.8
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCchhHHhHHHH---HHHHHHcCCCEEEEeCCccchHHHHHH-HHHHHcCCcEE
Q 021545 45 FPTPIHKWNLPNLPHNTERDDLSGMQLSGNKVRKLEFL---MADAVAQGADCIITIGGIQSNHCRAAA-VAAKYLNLDCY 120 (311)
Q Consensus 45 ~~TPL~~~~~~~Ls~~vKRedl~~~~~ggnK~Rkl~~l---l~~a~~~G~~~vVt~g~s~GNhg~AlA-~~a~~~Gl~~~ 120 (311)
++|||++ +++ .-|+ +|++++| +||||+|++.++ +.++.+.+..+||+ +|+||||+|+| ++|+.+|++|+
T Consensus 82 ~~TPL~~--l~~-~i~~-~E~~~~p-TgSfKdr~a~~l~~~l~~a~~~~~~~Iv~--atsGNtG~A~A~~~a~~~G~~~~ 154 (428)
T 1vb3_A 82 FPAPVAN--VES-DVGC-LELFHGP-TLAFKDFGGRFMAQMLTHIAGDKPVTILT--ATSGDTGAAVAHAFYGLPNVKVV 154 (428)
T ss_dssp SCCCEEE--EET-TEEE-EECCCST-TSBTHHHHHHHHHHHHHHHTTTCCEEEEE--ECSSSHHHHHHHHTTTCTTEEEE
T ss_pred CCCCeEE--ecC-CeEE-eeccCCC-cccHHHHHHHHHHHHHHHHHhcCCCEEEe--cCCchHHHHHHHHHhhhcCCeEE
Confidence 7899999 433 1278 9999766 899999999988 45553333456664 57899999999 59999999999
Q ss_pred EEEcCC-CcccCCCCCccchHHHHHHCCCEE--EEEcCccccccCcHHHHHHHHHHHHH------cCCCcEEecCCCCch
Q 021545 121 LILRTS-KVLVDQDPGLIGNLLVERLVGAHI--ELISKEEYSKIGSVTLTNILKEKLLK------EGRRPYVIPVGGSNS 191 (311)
Q Consensus 121 ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV--~~v~~~~~~~~~~~~~~~~~~~~l~~------~g~~~y~ip~g~~n~ 191 (311)
||||+. .+ ..++.+|+.+||+| +.++. .|++. .+.++++.+ +. . + ...+..|+
T Consensus 155 I~~P~~~~s--------~~k~~~m~~~GA~V~~v~v~g-~~d~~------~~~~~~~~~d~~~~~~~-~-~-~~~n~~n~ 216 (428)
T 1vb3_A 155 ILYPRGKIS--------PLQEKLFCTLGGNIETVAIDG-DFDAC------QALVKQAFDDEELKVAL-G-L-NSANSINI 216 (428)
T ss_dssp EEEETTCSC--------HHHHHHHHSCCTTEEEEEEES-CHHHH------HHHHHHGGGCHHHHHHH-T-E-ECCSTTSH
T ss_pred EEECCCCCC--------HHHHHHHHhcCCeEEEEEeCC-CHHHH------HHHHHHHHhchhhhhhc-C-e-eeCCCCCH
Confidence 999994 64 35788999999999 66655 35532 222222221 11 2 2 23344689
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCch--hhHH-------HH
Q 021545 192 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD--YFYD-------YT 262 (311)
Q Consensus 192 ~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~--~~~~-------~i 262 (311)
....||.+++.||++|+... +..+|+||+|+|+||+++|++.+++...|..|||||+.+++.. ++.. .+
T Consensus 217 ~~~~gq~t~~~Ei~~ql~~~--g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~~l~~~~~~G~~~~~~~~ 294 (428)
T 1vb3_A 217 SRLLAQICYYFEAVAQLPQE--TRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQ 294 (428)
T ss_dssp HHHHHTTHHHHHHHTTSCTT--TTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCCHHHHHHHHSCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHcccc--cCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCChHHHHHHHcCCcccCCCC
Confidence 88999999999999998631 2369999999999999999999998766777999999776421 1110 01
Q ss_pred HHhHhhhCCCCC------------------CCCeEEeccCCccchHHHH
Q 021545 263 QGLLDGLNAGVD------------------SRDIVNIQNVSVYMTFKNI 293 (311)
Q Consensus 263 ~~~~~g~~~~~~------------------~~dvv~v~e~~~~~~~~~~ 293 (311)
.++.++++.... .++++.|+|.+.+.++..+
T Consensus 295 ~tis~g~~i~~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l 343 (428)
T 1vb3_A 295 ATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMREL 343 (428)
T ss_dssp CCSSGGGCCSSCTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH
T ss_pred CcccchhcCCCCccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH
Confidence 223444433110 3568888888877777665
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.83 E-value=2.5e-20 Score=183.14 Aligned_cols=178 Identities=12% Similarity=0.033 Sum_probs=129.8
Q ss_pred CCCccccCCC-CCCCCCCCCCCCCCCCCchhHHhHHHH---HHHHH-HcCCC-EEEEeCCccchHHHH-HHHHHHHcCCc
Q 021545 46 PTPIHKWNLP-NLPHNTERDDLSGMQLSGNKVRKLEFL---MADAV-AQGAD-CIITIGGIQSNHCRA-AAVAAKYLNLD 118 (311)
Q Consensus 46 ~TPL~~~~~~-~Ls~~vKRedl~~~~~ggnK~Rkl~~l---l~~a~-~~G~~-~vVt~g~s~GNhg~A-lA~~a~~~Gl~ 118 (311)
.|||.+ +. ++ |+|.|.+++ +||||+|++.++ +..++ ++|.. +||+ +|+||||++ +|++|+++|++
T Consensus 93 ~~pl~~--l~~~~--~~kee~~~P--TgSFKDRga~~~~~~l~~a~~~~g~~~~Vv~--ASSGNtG~aa~aa~a~~~Gi~ 164 (468)
T 4f4f_A 93 VCPLVQ--TDANE--FVLELFHGP--TLAFKDVAMQLLARMMDYVLAQRGERATIVG--ATSGDTGGAAIEAFGGRDNTD 164 (468)
T ss_dssp SSCEEE--EETTE--EEEECCCST--TSBTHHHHHHHHHHHHHHHHHHTTCCEEEEE--ECSSHHHHHHHHHHTTCSSEE
T ss_pred CCceEE--ecCCe--ehHHhccCC--cccHHHHHHHHHHHHHHHHHHhcCCCcEEEE--ECCchHHHHHHHHHHhccCCc
Confidence 388888 32 22 788888876 899999999988 77774 56664 6664 578999955 56779999999
Q ss_pred EEEEEcCC-CcccCCCCCccchHHHHHHCC-CEE--EEEcCccccccCcHHHHHHHHHHHHHcC-----CCcEEecCCCC
Q 021545 119 CYLILRTS-KVLVDQDPGLIGNLLVERLVG-AHI--ELISKEEYSKIGSVTLTNILKEKLLKEG-----RRPYVIPVGGS 189 (311)
Q Consensus 119 ~~ivv~~~-~~~~~~~~~~~~n~~~~~~~G-AeV--~~v~~~~~~~~~~~~~~~~~~~~l~~~g-----~~~y~ip~g~~ 189 (311)
|+||||+. .+ ..+...++.+| ++| +.++. .|++. ++.++++.++. ...+.++. .
T Consensus 165 ~~I~~P~~~~s--------~~k~~~~~~~gganV~vv~v~g-~fdda------~~~~k~~~~d~~~~~~~~~~~vns--i 227 (468)
T 4f4f_A 165 IFILFPNGRVS--------PVQQRQMTSSGFSNVHALSIEG-NFDDC------QNLVKGMFNDLEFCDALSLSGVNS--I 227 (468)
T ss_dssp EEEEEETTCSC--------HHHHHHHHCSCCTTEEEEEEES-CHHHH------HHHHHHHHHCHHHHHHHTEEECCT--T
T ss_pred EEEEeCCCCCC--------HHHHHHHHhcCCCeEEEeecCC-CHHHH------HHHHHHHHhccccccccceEeCCC--C
Confidence 99999998 65 24678899997 465 55654 47642 22233333211 12344433 4
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCCCe---EEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 190 NSIGTWGYIEAIKEIEQQLQTGTGGVKFDD---IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 190 n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~---ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
|+..+.|+.+++.||++|+. .+|. ||||+|+||+++|++.+.+.-.|..|||+| +.+..
T Consensus 228 n~~ri~GQ~T~~~Ei~~ql~------~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~ 289 (468)
T 4f4f_A 228 NWARIMPQVVYYFTAALSLG------APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDND 289 (468)
T ss_dssp SHHHHGGGHHHHHHHHHHTT------TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCC
T ss_pred CHHHHHhHHHHHHHHHHhcc------cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCch
Confidence 88889999999999999985 4788 999999999999999885543356699999 66554
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.81 E-value=1.8e-19 Score=179.02 Aligned_cols=191 Identities=12% Similarity=-0.003 Sum_probs=129.2
Q ss_pred CCCCCccccCCCCCCC-CCCCCCCCCCCCCchhHHhHHHH---HHHHH-HcC---------CCEEEEeCCccchHHHHHH
Q 021545 44 HFPTPIHKWNLPNLPH-NTERDDLSGMQLSGNKVRKLEFL---MADAV-AQG---------ADCIITIGGIQSNHCRAAA 109 (311)
Q Consensus 44 ~~~TPL~~~~~~~Ls~-~vKRedl~~~~~ggnK~Rkl~~l---l~~a~-~~G---------~~~vVt~g~s~GNhg~AlA 109 (311)
.+.|||.++.++++.+ |+|.|.+++ +||||||.+.++ +.+++ ++| ..+||+ +|+||||.| |
T Consensus 94 ~g~TPLv~~~l~~l~~l~~K~e~~nP--TgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~~~Iv~--ATSGNtG~A-A 168 (514)
T 1kl7_A 94 DEVTPLVQNVTGDKENLHILELFHGP--TYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVG--ATSGDTGSA-A 168 (514)
T ss_dssp TTSSCEECCTTCSSSCEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEE--ECSSSHHHH-H
T ss_pred CCCCceeehhcccccchhhhhhccCC--CCcHHHHHHHHHHHHHHHHHHhcCCccccccCCCCEEEE--CCCCcHHHH-H
Confidence 6679999821233322 788888876 899999999988 55553 345 345664 578999999 6
Q ss_pred HHH--HHcCCcEEEEEcCC-CcccCCCCCccchHHHH-H--HCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCC--Cc
Q 021545 110 VAA--KYLNLDCYLILRTS-KVLVDQDPGLIGNLLVE-R--LVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR--RP 181 (311)
Q Consensus 110 ~~a--~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~-~--~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~--~~ 181 (311)
++| ++.|++|+||+|+. .+. .+...+ + .+|++|+.++. .|++ + .+.++++.++.+ ..
T Consensus 169 ~~a~a~~~Gi~~~I~~P~~~~S~--------~q~~qm~~~~g~~~~vv~v~g-~fdd-----a-~~~vk~l~~~~~~~~~ 233 (514)
T 1kl7_A 169 IYGLRGKKDVSVFILYPTGRISP--------IQEEQMTTVPDENVQTLSVTG-TFDN-----C-QDIVKAIFGDKEFNSK 233 (514)
T ss_dssp HHHHTTCTTEEEEEEEETTSSCH--------HHHHHHHHCCCTTEEEEEESS-CHHH-----H-HHHHHHHHHCSSCC--
T ss_pred HHHHHhhcCCeEEEEEcCCCCCH--------HHHHHHhhhcCCCEEEEEcCC-CHHH-----H-HHHHHHHHhccccccc
Confidence 666 89999999999997 542 233344 3 34556666665 4654 2 333445544321 01
Q ss_pred E-EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 182 Y-VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 182 y-~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+ +...+..|+..+.|..+.+.|+.+|+... ..+.+|+||||+|+||++.|.+.+.+.-.|..|+|+|++++++
T Consensus 234 ~~~~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~-~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n~~ 307 (514)
T 1kl7_A 234 HNVGAVNSINWARILAQMTYYFYSFFQATNG-KDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNENDI 307 (514)
T ss_dssp CCBCCCCSCCHHHHHHHHHHHHHHHHHHHSS-SSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCCH
T ss_pred ceeEeeCCCCHhHHhhHHHHHHHHHHHHhhh-cCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCcch
Confidence 1 11122347777889989999999998310 0145899999999999999988755543466799999999854
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.81 E-value=2.4e-19 Score=176.66 Aligned_cols=183 Identities=9% Similarity=0.009 Sum_probs=131.5
Q ss_pred CCccccCCCCC-C--CCCCCCCCCCCCCCchhHHhHHHH---HHHHH-HcCCCE-EEEeCCccchHHHHHHHHHH-HcCC
Q 021545 47 TPIHKWNLPNL-P--HNTERDDLSGMQLSGNKVRKLEFL---MADAV-AQGADC-IITIGGIQSNHCRAAAVAAK-YLNL 117 (311)
Q Consensus 47 TPL~~~~~~~L-s--~~vKRedl~~~~~ggnK~Rkl~~l---l~~a~-~~G~~~-vVt~g~s~GNhg~AlA~~a~-~~Gl 117 (311)
|||.+ +..- . -|+|-|.+++ +||||||.+.++ +..++ ++|.+. ||+ +|+||||.|+|++++ .+|+
T Consensus 103 ~Pl~~--l~~~~~~~l~vkee~~~P--TgSFKDRga~~~~~ll~~a~~~~g~~~~Vv~--ASSGNtG~Aaa~a~~~~~Gi 176 (487)
T 3v7n_A 103 TPLTT--LGTENGAPVSLLELSNGP--TLAFKDMAMQLLGNLFEYTLAKHGETLNILG--ATSGDTGSAAEYAMRGKEGV 176 (487)
T ss_dssp SCEEE--EEEETTEEEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHTTTCCEEEEE--ECSSHHHHHHHHHHTTCTTE
T ss_pred ceeEE--ecCCCCcceeHHhhccCC--cCcHHHHHHHHHHHHHHHHHHhcCCCcEEEE--eCChHHHHHHHHHHHhccCC
Confidence 79988 3320 0 1677666665 899999999988 88875 456654 564 578999999877776 8999
Q ss_pred cEEEEEcCC-CcccCCCCCccchHHHHHHCCC---EEEEEcCccccccCcHHHHHHHHHHHHHc-----CCCcEEecCCC
Q 021545 118 DCYLILRTS-KVLVDQDPGLIGNLLVERLVGA---HIELISKEEYSKIGSVTLTNILKEKLLKE-----GRRPYVIPVGG 188 (311)
Q Consensus 118 ~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GA---eV~~v~~~~~~~~~~~~~~~~~~~~l~~~-----g~~~y~ip~g~ 188 (311)
+|+||+|+. .+ ..+..+|+.+|| +++.++. .|++. +++++++.++ ....++++.
T Consensus 177 ~~~I~~P~~~~s--------~~k~~qm~~~Ga~nv~vv~v~G-~fDda------~~~vk~~~~d~~~~~~~~l~~vns-- 239 (487)
T 3v7n_A 177 RVFMLSPHKKMS--------AFQTAQMYSLQDPNIFNLAVNG-VFDDC------QDIVKAVSNDHAFKAQQKIGTVNS-- 239 (487)
T ss_dssp EEEEEEETTCSC--------HHHHHHHHTCCCTTEEEEEEES-CHHHH------HHHHHHHHTCHHHHHHTTEECCST--
T ss_pred eEEEEECCCCCC--------HHHHHHHHhcCCCcEEEEEECC-CHHHH------HHHHHHhhhchHHHhhcCeeeeCC--
Confidence 999999997 64 357889999998 6777765 46642 2233333321 112333432
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCC
Q 021545 189 SNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 254 (311)
Q Consensus 189 ~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~ 254 (311)
.|+..+.|..+.+.|+..|+.+ .++.+|+|+||+|+||+++|++.+.+.--|..|||+++.+++
T Consensus 240 ~Np~ri~gQ~tyy~~~~~el~~--~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n~ 303 (487)
T 3v7n_A 240 INWARVVAQVVYYFKGYFAATR--SNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEND 303 (487)
T ss_dssp TCHHHHHHHHHHHHHHHHHTCS--STTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTCH
T ss_pred CCHHHHHhHHHHHHHHHHHHHh--cCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCCc
Confidence 4788888988888888888742 124699999999999999999987654335569999999984
No 43
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=89.52 E-value=9.8 Score=33.01 Aligned_cols=160 Identities=8% Similarity=-0.032 Sum_probs=79.9
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch---HHHHHHCCC--E
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLVGA--H 149 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n---~~~~~~~GA--e 149 (311)
...+..+.+++++.||..+ ...+........++..|++++++-....+. +..+....+. ..+++.+|. +
T Consensus 51 ~~~~~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~v~~d~~~~g~~a~~~l~~~~g~~~~ 129 (303)
T 3d02_A 51 VKIIEDLIARKVDAITIVP-NDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGG 129 (303)
T ss_dssp HHHHHHHHHTTCSEEEECC-SCHHHHHHHHHHHHHTTCEEEEESCTTCTTCSEEEESSCHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHcCCCEEEEec-CChHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEecCHHHHHHHHHHHHHHHhCcCce
Confidence 3456666778899988654 333333344455667899988764320110 0000000111 112333676 6
Q ss_pred EEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 150 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 150 V~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
+..+... ... ....+.+...+.+++.++..-++... ..+.....++ ....++.++- .++|.||+. +.
T Consensus 130 i~~i~g~~~~~--~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d 198 (303)
T 3d02_A 130 YVIYVGSLTVP--QHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSR-RTTLDLMKTY------PDLKAVVSF--GS 198 (303)
T ss_dssp EEEECSCSSCH--HHHHHHHHHHHHHHHHCTTEEESSSCBSCTTCHHHHH-HHHHHHHHHC------TTEEEEEES--ST
T ss_pred EEEEecCCCCc--cHHHHHHHHHHHHHhhCCCCEEEEeecCCCCCHHHHH-HHHHHHHHhC------CCCCEEEEe--CC
Confidence 6666432 111 11123333444555444333233321 1111222333 2344554432 358888875 44
Q ss_pred hhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 228 GTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 228 Gt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
..+.|+..+++..+. ++.|+|++-
T Consensus 199 ~~a~g~~~al~~~g~~~dv~vig~d~ 224 (303)
T 3d02_A 199 NGPIGAGRAVKEKRAKNKVAVYGMMI 224 (303)
T ss_dssp THHHHHHHHHHHTTCTTTCEEEECCC
T ss_pred cchhHHHHHHHhcCCCCCeEEEEeCC
Confidence 578899999998776 688888753
No 44
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=88.69 E-value=8.1 Score=33.64 Aligned_cols=163 Identities=10% Similarity=0.042 Sum_probs=82.0
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc-C---CCCC-ccchH--------HHHHH
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV-D---QDPG-LIGNL--------LVERL 145 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~-~---~~~~-~~~n~--------~~~~~ 145 (311)
....+..+.+++++.||..+ ...+........++..|++++++-....... . ..+. ...|. .+++.
T Consensus 46 ~~~~i~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~ 124 (306)
T 8abp_A 46 TLNAIDSLAASGAKGFVICT-PDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKE 124 (306)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-SCGGGHHHHHHHHHHTTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeC-CCchhhHHHHHHHHHCCCcEEEeCCCCCCccccccccccEEecChhHHHHHHHHHHHHH
Confidence 34557777888999988764 3334444444567778999887752211100 0 0000 01122 22323
Q ss_pred CCC------EEEEE--cCccccccCcHHHHHHHHHHHHHcC-CC--cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCC
Q 021545 146 VGA------HIELI--SKEEYSKIGSVTLTNILKEKLLKEG-RR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGG 214 (311)
Q Consensus 146 ~GA------eV~~v--~~~~~~~~~~~~~~~~~~~~l~~~g-~~--~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~ 214 (311)
+|. ++-.+ +..... ...++.+...+.+++.+ +. ......+..+. ..|| ..+.++.++-
T Consensus 125 ~g~~~~~~~~i~~~~~~~~~~~--~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------ 193 (306)
T 8abp_A 125 MQKRGWDVKESAVMAITANELD--TARRRTTGSMDALKAAGFPEKQIYQVPTKSNDI--PGAF-DAANSMLVQH------ 193 (306)
T ss_dssp HHHHTCCGGGEEEEEEECTTSH--HHHHHHHHHHHHHHHHTCCGGGEEEEECSSSSH--HHHH-HHHHHHHTTC------
T ss_pred HHhcCCCccceEEEEecCCCCh--HHHHHHHHHHHHHHhcCCCCcEEEeeccCCCCh--HHHH-HHHHHHHHhC------
Confidence 343 33222 221111 11223344445555543 11 12222222222 2343 3444554332
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC---CCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL---KAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~---~~rVigV~~~g 253 (311)
.++|.+++-+.+...+.|+..++++.+. ++.|+|++-..
T Consensus 194 ~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~~ 235 (306)
T 8abp_A 194 PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVD 235 (306)
T ss_dssp TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGG
T ss_pred CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcHH
Confidence 4588855667777889999999999875 67788876543
No 45
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=87.83 E-value=8.6 Score=33.28 Aligned_cols=162 Identities=7% Similarity=-0.042 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch--HHHHHHCC---
Q 021545 78 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LLVERLVG--- 147 (311)
Q Consensus 78 kl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n--~~~~~~~G--- 147 (311)
+....+..+.+++++.||..+ ...+........+...|++++++-...... +..+....+. ...+...|
T Consensus 57 ~~~~~i~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~ 135 (304)
T 3gbv_A 57 SFVATSQAVIEEQPDGVMFAP-TVPQYTKGFTDALNELGIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLAVND 135 (304)
T ss_dssp HHHHHHHHHHTTCCSEEEECC-SSGGGTHHHHHHHHHHTCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhcCCCEEEECC-CChHHHHHHHHHHHHCCCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHhCCC
Confidence 344557777788999998764 333333444555677799988775432210 0000000111 11222234
Q ss_pred CEEEEEcCc---cccccCcHHHHHHHHHHHHHcCCCcE--EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021545 148 AHIELISKE---EYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 222 (311)
Q Consensus 148 AeV~~v~~~---~~~~~~~~~~~~~~~~~l~~~g~~~y--~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv 222 (311)
.+|..+... .........+.+...+.+++.+...- .+..+..+.. .++ ..+.+++++- .++|.||+
T Consensus 136 ~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~------~~~~ai~~ 206 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHADLNI--EDS-RMLDDFFREH------PDVKHGIT 206 (304)
T ss_dssp SEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSS--CHH-HHHHHHHHHC------TTCCEEEE
T ss_pred CeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHH--HHH-HHHHHHHHhC------CCeEEEEE
Confidence 467666410 00000112233444555665554321 1212222222 233 3445665542 36899998
Q ss_pred eCCcchhHHHHHHHHhhCCC-CCeEEEEecc
Q 021545 223 ACGSGGTIAGLSLGSWLGTL-KAKVHAFSVC 252 (311)
Q Consensus 223 ~vGtGGt~aGl~~~~~~~~~-~~rVigV~~~ 252 (311)
.... +.|+..++++.+. ++.|+|++-.
T Consensus 207 ~~d~---a~g~~~al~~~g~~di~vig~d~~ 234 (304)
T 3gbv_A 207 FNSK---VYIIGEYLQQRRKSDFSLIGYDLL 234 (304)
T ss_dssp SSSC---THHHHHHHHHTTCCSCEEEEESCC
T ss_pred cCcc---hHHHHHHHHHcCCCCcEEEEeCCC
Confidence 7654 5689999999885 8888888643
No 46
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.48 E-value=9 Score=29.92 Aligned_cols=31 Identities=6% Similarity=-0.035 Sum_probs=24.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
++|+.+|. |..|..+|...+..|++++++-+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEEC
Confidence 45666774 89999999999888988777743
No 47
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=85.99 E-value=9.4 Score=34.05 Aligned_cols=154 Identities=15% Similarity=0.086 Sum_probs=81.4
Q ss_pred HHHHHH-HcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccC---------CCCCccc--hHHHHHHCCCE
Q 021545 82 LMADAV-AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD---------QDPGLIG--NLLVERLVGAH 149 (311)
Q Consensus 82 ll~~a~-~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~---------~~~~~~~--n~~~~~~~GAe 149 (311)
.+.+.+ +++++.|| |...+....+++-.+...+++++.+......... .+....+ -...+...|.+
T Consensus 63 ~~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 140 (358)
T 3hut_A 63 IARAFVDDPRVVGVL--GDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFT 140 (358)
T ss_dssp HHHHHHHCTTEEEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCC
T ss_pred HHHHHhccCCcEEEE--cCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCC
Confidence 344455 56677776 4445667778888999999998775322110000 0000011 12233445754
Q ss_pred -EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 150 -IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 150 -V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|..+. ...|. ....+...+.+++.+-.. ..++.+..+. .....+|.+ ..+|.||++
T Consensus 141 ~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~------~~~~~~l~~--------~~~d~i~~~- 201 (358)
T 3hut_A 141 SVAVIGVTTDWG----LSSAQAFRKAFELRGGAVVVNEEVPPGNRRF------DDVIDEIED--------EAPQAIYLA- 201 (358)
T ss_dssp EEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCCC------HHHHHHHHH--------HCCSEEEEE-
T ss_pred EEEEEecCcHHH----HHHHHHHHHHHHHcCCEEEEEEecCCCCccH------HHHHHHHHh--------cCCCEEEEc-
Confidence 44443 22221 123344455566554321 1233322221 123333432 248888876
Q ss_pred CcchhHHHHHHHHhhCCCCCeEEEEeccCCch
Q 021545 225 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD 256 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~ 256 (311)
+.+..+.++...+++.+.++.+++.+......
T Consensus 202 ~~~~~a~~~~~~~~~~g~~~p~~~~~~~~~~~ 233 (358)
T 3hut_A 202 MAYEDAAPFLRALRARGSALPVYGSSALYSPK 233 (358)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEECGGGCSHH
T ss_pred cCchHHHHHHHHHHHcCCCCcEEecCcccCHH
Confidence 55668889999999999889998876554443
No 48
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=85.34 E-value=7.2 Score=34.28 Aligned_cols=160 Identities=13% Similarity=0.049 Sum_probs=79.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC----C--ccchH---HHHHHCCCE-
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP----G--LIGNL---LVERLVGAH- 149 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~----~--~~~n~---~~~~~~GAe- 149 (311)
...+..+.+++++.||..+. ..+........++..|++++++-...... ...+ . ..+.. .+.+..|..
T Consensus 48 ~~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~-~~~~~V~~D~~~~g~~a~~~L~~~~G~~~ 125 (313)
T 3m9w_A 48 MSQIENMINRGVDVLVIIPY-NGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGELQAKALVDIVPQGN 125 (313)
T ss_dssp HHHHHHHHHTTCSEEEEECS-STTSCHHHHHHHHTTTCEEEEESSCCTTS-CCSEEEEECHHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHcCCCEEEEeCC-ChhhhHHHHHHHHHCCCeEEEECCcCCCC-CceEEEecCHHHHHHHHHHHHHHhCCCCc
Confidence 34567777888999887643 33333345556677899987775332210 0000 0 01111 122245665
Q ss_pred EEEEcC-ccccccCcHHHHHHHHHHHHHcC--CCcEEecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021545 150 IELISK-EEYSKIGSVTLTNILKEKLLKEG--RRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 225 (311)
Q Consensus 150 V~~v~~-~~~~~~~~~~~~~~~~~~l~~~g--~~~y~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 225 (311)
+..+.. .... ...++.+...+.+++.+ +..-++... ..+.....++ ..+.+++++.+ ..+|.||+.
T Consensus 126 i~~i~g~~~~~--~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-----~~~~ai~~~-- 195 (313)
T 3m9w_A 126 YFLMGGSPVDN--NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL-KIMENALTANN-----NKIDAVVAS-- 195 (313)
T ss_dssp EEEEESCTTCH--HHHHHHHHHHHHHHHHHHTTSEEEEEEEECGGGCHHHHH-HHHHHHHHHTT-----TCCCEEEES--
T ss_pred EEEEECCCCCc--cHHHHHHHHHHHHHhhccCCCEEEEeeccCCCcCHHHHH-HHHHHHHHhCC-----CCeeEEEEC--
Confidence 444432 1111 11122233334444431 122222211 1122222343 34556655431 358999875
Q ss_pred cchhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 226 SGGTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 226 tGGt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
+...+.|+..++++.+. ++.|+|++-
T Consensus 196 ~d~~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 196 NDATAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp SHHHHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred CCchHHHHHHHHHHcCCCCCcEEEecCC
Confidence 56678899999998775 577777653
No 49
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.49 E-value=14 Score=32.62 Aligned_cols=57 Identities=18% Similarity=-0.008 Sum_probs=34.5
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
|...||| |++ +.-|+++|...++.|.+++++-+.... ...-...++..|.+++.+.-
T Consensus 7 gKvalVT-Gas-~GIG~aiA~~la~~Ga~Vv~~~~~~~~-------~~~~~~~i~~~g~~~~~~~~ 63 (254)
T 4fn4_A 7 NKVVIVT-GAG-SGIGRAIAKKFALNDSIVVAVELLEDR-------LNQIVQELRGMGKEVLGVKA 63 (254)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEc
Confidence 4445666 544 568999998888899887665432211 01224455667777765543
No 50
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=82.24 E-value=22 Score=30.51 Aligned_cols=160 Identities=11% Similarity=0.045 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch---HHHHHHC-CC--
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLV-GA-- 148 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n---~~~~~~~-GA-- 148 (311)
...+..+.+++++.||..+. ..+........+...|++++++-...... +..+....+. ..+.+.+ |.
T Consensus 54 ~~~~~~l~~~~vdgiI~~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~ 132 (293)
T 3l6u_A 54 REQILEFVHLKVDAIFITTL-DDVYIGSAIEEAKKAGIPVFAIDRMIRSDAVVSSITSNNQMIGEQLASYIKNELIKQTG 132 (293)
T ss_dssp HHHHHHHHHTTCSEEEEECS-CTTTTHHHHHHHHHTTCCEEEESSCCCCTTCSEEEEECHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCEEEEecC-ChHHHHHHHHHHHHcCCCEEEecCCCCCCcceeEEecCHHHHHHHHHHHHHHHhccCCC
Confidence 34566677788998887643 33333344556667899987774332210 0000000011 1122223 32
Q ss_pred ----EEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 149 ----HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 149 ----eV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
+|..+....... ....+.+...+.+++. +..-+.+....+.....|| ..+.+++++- .++|.||+.
T Consensus 133 ~~~~~i~~i~g~~~~~-~~~~R~~gf~~~l~~~-~g~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~- 202 (293)
T 3l6u_A 133 RSTGRIVEITGTANVY-TTNERHRGFLKGIENE-PTLSIVDSVSGNYDPVTSE-RVMRQVIDSG------IPFDAVYCH- 202 (293)
T ss_dssp CSCEEEEEEECSTTCH-HHHHHHHHHHHHHTTC-TTEEEEEEEECTTCHHHHH-HHHHHHHHTT------CCCSEEEES-
T ss_pred CCCceEEEEECCCCCc-hHHHHHHHHHHHHHhC-CCcEEeeeccCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC-
Confidence 566654211110 1112233344444443 1222222111111222333 2344554432 468999874
Q ss_pred CcchhHHHHHHHHhhCCC-CCeEEEEec
Q 021545 225 GSGGTIAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
+...+.|+..++++.+. ++.|+|++-
T Consensus 203 -~d~~a~g~~~al~~~g~~di~vig~d~ 229 (293)
T 3l6u_A 203 -NDDIAMGVLEALKKAKISGKIVVGIDG 229 (293)
T ss_dssp -SHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred -CchHHHHHHHHHHhCCCCCeEEEEecC
Confidence 66778899999998876 888888864
No 51
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=81.77 E-value=2.3 Score=35.72 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=42.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.++|+++||.+| ...|.| .++|.-|..+|++++++.+-..+..++ .....+..|+..|++++
T Consensus 121 ~~~gi~~lvv~G-~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~--~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 121 RQRGVDEVDVVG-IATDHCVRQTAEDAVRNGLATRVLVDLTAGVSAD--TTVAALEEMRTASVELV 183 (186)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTTCEEE
T ss_pred HhcCCCEEEEEE-ecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHH--HHHHHHHHHHHcCCEEe
Confidence 457999999886 445655 578888999999999987654432110 12234677888888775
No 52
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=81.72 E-value=3.2 Score=35.74 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=42.5
Q ss_pred HHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC-CccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-GLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~-~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++|+.+|-....=-.++|.-|..+|++++++.+-..+...+ + .....+..|+..|++++
T Consensus 150 ~~~gi~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~-~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 150 EKHHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDD-PEVINKVKEELKAHNINVV 214 (216)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCC-HHHHHHHHHHHHHTTCEEE
T ss_pred HhCCCCEEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcc-cHHHHHHHHHHHHcCCEEe
Confidence 4578999998874443444678888999999999887654432111 0 11235777888888765
No 53
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=81.19 E-value=27 Score=30.95 Aligned_cols=154 Identities=15% Similarity=0.075 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCC--------CC--ccch--HH-HHHHCC
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD--------PG--LIGN--LL-VERLVG 147 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~--------~~--~~~n--~~-~~~~~G 147 (311)
..+.+.++++++.|| |...+....+++-.+...+++++............. +. ..+. .. +++.+|
T Consensus 60 ~~~~~l~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 137 (356)
T 3ipc_A 60 SVANKFVADGVKFVV--GHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFK 137 (356)
T ss_dssp HHHHHHHHTTCCEEE--ECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHCCCcEEE--cCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcC
Confidence 334555567888877 344566777888889999998766432211100000 10 0011 11 334457
Q ss_pred CE-EEEEcC-ccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021545 148 AH-IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 222 (311)
Q Consensus 148 Ae-V~~v~~-~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv 222 (311)
.+ |..+.. ..|. ....+...+.+++.+-.. ..++.+..+ +.....+|.+ ..+|.||+
T Consensus 138 ~~~iaii~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~ 199 (356)
T 3ipc_A 138 DAKVAIIHDKTPYG----QGLADETKKAANAAGVTEVMYEGVNVGDKD------FSALISKMKE--------AGVSIIYW 199 (356)
T ss_dssp TCCEEEEECSSHHH----HHHHHHHHHHHHHTTCCCSEEEECCTTCCC------CHHHHHHHHH--------TTCCEEEE
T ss_pred CCEEEEEeCCChHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCC------HHHHHHHHHh--------cCCCEEEE
Confidence 65 444432 2221 123344455565554332 122322221 1122233322 25888887
Q ss_pred eCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 223 ACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 223 ~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+ +.+..+.++...++..+.++++++.....++
T Consensus 200 ~-~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 231 (356)
T 3ipc_A 200 G-GLHTEAGLIIRQAADQGLKAKLVSGDGIVSN 231 (356)
T ss_dssp E-SCHHHHHHHHHHHHHHTCCCEEEECGGGCSH
T ss_pred c-cCchHHHHHHHHHHHCCCCCcEEEeccccCH
Confidence 4 4567788999999998888888876655444
No 54
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=81.09 E-value=28 Score=30.61 Aligned_cols=162 Identities=14% Similarity=0.114 Sum_probs=79.3
Q ss_pred hHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCc-----cc-CCCCCccchH---HHHHHC--
Q 021545 78 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LV-DQDPGLIGNL---LVERLV-- 146 (311)
Q Consensus 78 kl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~-----~~-~~~~~~~~n~---~~~~~~-- 146 (311)
+....+..++.++++.||... ..++........++..|++++.+-+.... .+ ..+....+.. .+++.+
T Consensus 48 ~q~~~i~~li~~~vdgiii~~-~~~~~~~~~~~~a~~~gipvV~~d~~~~~~~~~~~v~~~D~~~~g~~~~~~L~~~~~~ 126 (316)
T 1tjy_A 48 GQVQLVNNFVNQGYDAIIVSA-VSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDK 126 (316)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-SSSSTTHHHHHHHHHTTCEEEEESSCCCGGGCSEEEESCCHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCcCEEEEecCCCCCCCceEEEecCCHHHHHHHHHHHHHHHcCC
Confidence 334457777788999888643 33333334445567789998877432111 00 0000001111 123322
Q ss_pred CC-EEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 147 GA-HIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 147 GA-eV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|. ++..+... ... ....+.+...+.+++.++..-++.....+.....++ ..+.+++++- .++|.||++
T Consensus 127 g~~~i~~i~g~~~~~--~~~~r~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~aI~~~- 196 (316)
T 1tjy_A 127 EKAKVAFFYSSPTVT--DQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSL-QTAEGIIKAY------PDLDAIIAP- 196 (316)
T ss_dssp SSEEEEEEESCSSCH--HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC------SSCCEEEEC-
T ss_pred CCCEEEEEEcCCCCh--hHHHHHHHHHHHHHhhCCCcEEEEeccCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC-
Confidence 33 45555321 111 112233344445544433322222111122222333 3444555432 358999875
Q ss_pred CcchhHHHHHHHHhhCC-CCCeEEEEec
Q 021545 225 GSGGTIAGLSLGSWLGT-LKAKVHAFSV 251 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~-~~~rVigV~~ 251 (311)
+..++.|+..++++.+ .++.|+|++.
T Consensus 197 -nD~~A~g~~~al~~~G~~dv~VvG~D~ 223 (316)
T 1tjy_A 197 -DANALPAAAQAAENLKRNNLAIVGFST 223 (316)
T ss_dssp -STTHHHHHHHHHHHTTCCSCEEEEBCC
T ss_pred -CCccHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4567899999999887 4577877754
No 55
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.93 E-value=16 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.085 Sum_probs=23.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 17 ~~lVT-Ga-s~gIG~a~a~~la~~G~~V~~~~r~ 48 (280)
T 3pgx_A 17 VAFIT-GA-ARGQGRSHAVRLAAEGADIIACDIC 48 (280)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEecc
Confidence 34555 54 4678999999999999988777543
No 56
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=80.41 E-value=5.7 Score=36.17 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
+..++..+...|-++|+..|| +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.-
T Consensus 153 a~~~~~~~~~~g~~~vli~gg-~g~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~~ 215 (349)
T 3pi7_A 153 AIAMFDIVKQEGEKAFVMTAG-ASQLCKLIIGLAKEEGFRPIVTVRRD-----------EQIALLKDIGAAHVLN 215 (349)
T ss_dssp HHHHHHHHHHHCCSEEEESST-TSHHHHHHHHHHHHHTCEEEEEESCG-----------GGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEEE
Confidence 334455555556566665544 47899999999999999766665332 3577788899986543
No 57
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=79.76 E-value=16 Score=31.26 Aligned_cols=79 Identities=16% Similarity=0.064 Sum_probs=55.4
Q ss_pred hhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC-cccCCCCCccchHHHHHHCCCEEEE
Q 021545 74 NKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK-VLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 74 nK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~-~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
|-...++..++.|.+.|++.||.. |++|-++..++-.. .|++.++|....- ....++.-..++...++..|.+|+.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVA-S~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t 103 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVA-SSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVR 103 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEE-eCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEE
Confidence 777888888999999999998875 67788876666533 7888888873321 1100111125678899999999987
Q ss_pred EcC
Q 021545 153 ISK 155 (311)
Q Consensus 153 v~~ 155 (311)
-.-
T Consensus 104 ~tH 106 (201)
T 1vp8_A 104 QSH 106 (201)
T ss_dssp CCC
T ss_pred Eec
Confidence 654
No 58
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=79.00 E-value=3.3 Score=34.32 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=41.5
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+..++ .+...+..|+..|++|+
T Consensus 116 ~~~gi~~lvi~G-~~t~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~~~--~h~~al~~m~~~g~~v~ 178 (180)
T 1im5_A 116 RGNGVKRVYICG-VATEYCVRATALDALKHGFEVYLLRDAVKGIKPE--DEERALEEMKSRGIKIV 178 (180)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTTCEEE
T ss_pred HhCCCCEEEEEE-eecCHHHHHHHHHHHHCCCEEEEehhhccCCCHH--HHHHHHHHHHHcCCEEE
Confidence 457999999886 445655 577888889999999887665432110 01234666777788775
No 59
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=78.80 E-value=25 Score=30.67 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=24.8
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 11 ~k~~lVT-Ga-s~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 11 GKVAFVT-GA-ARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TCEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEe-CC-CchHHHHHHHHHHHCCCeEEEEecc
Confidence 3344565 54 4678999999999999998777544
No 60
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=78.50 E-value=4.6 Score=35.13 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=43.4
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.++|+++||.+|- ..|.| .++|.-|..+|++++++-+-..+...+. .....+..|+..|++|+.
T Consensus 163 ~~~gi~~lvv~G~-~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~-~~~~aL~~m~~~g~~v~t 227 (235)
T 2wt9_A 163 KERGIDTVYVVGI-ATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNG-SLEQAWQTMQQQGVVRIQ 227 (235)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECCCSTT-HHHHHHHHHHHTTCEEEC
T ss_pred HHCCCCEEEEEEe-CccHHHHHHHHHHHhCCCEEEEechhccCCChhH-HHHHHHHHHHHcCCEEEE
Confidence 4579999998864 45555 5788889999999998876544321000 123346777788988864
No 61
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=78.34 E-value=35 Score=30.05 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=24.8
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |++ +--|+++|..-.+.|.+++++-+.
T Consensus 28 gk~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFIT-GAA-RGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEE-CCC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 3344565 544 678999999999999998877554
No 62
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=77.89 E-value=5.3 Score=34.72 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=44.4
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.+.|+++||.+| ...+.| .++|.-|..+|++++++.+-..+...+ .....+..|+..|++|+...
T Consensus 153 ~~~gi~~lvv~G-~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~--~h~~aL~~m~~~g~~v~~s~ 218 (227)
T 3r2j_A 153 HSIGARRVFVCG-VAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDA--AWSARTAELKDAGVVLLKSS 218 (227)
T ss_dssp HHHTCCEEEEEE-SCTTTHHHHHHHHHHHTTCEEEEEEEEECCSCGG--GHHHHHHHHHTTTCEEECGG
T ss_pred HHcCCCEEEEEE-eccchHHHHHHHHHHHCCCEEEEEhHhhCCCCHH--HHHHHHHHHHHcCCEEEEHH
Confidence 346899999886 445666 578888999999999887654432111 12334677888898886543
No 63
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=76.95 E-value=22 Score=33.66 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=59.7
Q ss_pred CEEEEeCCccchHHHHHHHHHH-HcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHH
Q 021545 92 DCIITIGGIQSNHCRAAAVAAK-YLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNIL 170 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~-~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~ 170 (311)
++++..|+ ++..|+|.|.+.+ ..|-..+++..+..+..+ + . ....|.. ....
T Consensus 51 K~vLVtGa-SsGiGlA~AialAf~~GA~vi~v~~~~~~~~~-------~------~-------atag~~~------~~a~ 103 (401)
T 4ggo_A 51 KNVLVLGC-SNGYGLASRITAAFGYGAATIGVSFEKAGSET-------K------Y-------GTPGWYN------NLAF 103 (401)
T ss_dssp CEEEEESC-SSHHHHHHHHHHHHHHCCEEEEEECCCCCCSS-------S------C-------CCHHHHH------HHHH
T ss_pred CEEEEECC-CCcHHHHHHHHHHhhCCCCEEEEecCCccccc-------c------c-------ccccchh------HHHH
Confidence 44433454 4678888887766 678888877766543210 0 0 0001211 1233
Q ss_pred HHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 171 KEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 171 ~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
.+..++.|.....++-+-+++.... .+..+|.+++ +.+|.+|-..+.+
T Consensus 104 ~~~i~~~G~~a~~i~~Dv~d~e~i~---~vi~~i~~~~------G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 104 DEAAKREGLYSVTIDGDAFSDEIKA---QVIEEAKKKG------IKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHTCCEEEEESCTTSHHHHH---HHHHHHHHTT------CCEEEEEECCCCS
T ss_pred HHHHHHcCCCceeEeCCCCCHHHHH---HHHHHHHHhc------CCCCEEEEecccc
Confidence 4455666777777887766665443 3556776654 5699999999976
No 64
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=76.51 E-value=33 Score=29.95 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=24.5
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 32 gk~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 32 GKRALIT-GA-STGIGKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp TCEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344555 54 4788999999999999987777654
No 65
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=75.67 E-value=39 Score=29.15 Aligned_cols=160 Identities=13% Similarity=0.064 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch--H-HHHHHC-CC
Q 021545 78 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--L-LVERLV-GA 148 (311)
Q Consensus 78 kl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n--~-~~~~~~-GA 148 (311)
+....+..+++++++.||..+. ..+........+...|++++++-...... +..+....+. . .+.+.+ |.
T Consensus 49 ~~~~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~ 127 (305)
T 3g1w_A 49 EQITVLEQAIAKNPAGIAISAI-DPVELTDTINKAVDAGIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGE 127 (305)
T ss_dssp HHHHHHHHHHHHCCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhCCCEEEEcCC-CHHHHHHHHHHHHHCCCcEEEECCCCCCCceeEEECcCHHHHHHHHHHHHHHHhCCC
Confidence 3344567777788998887543 23323344555667899987775432210 0000000011 1 122222 54
Q ss_pred E-EEEEcCccccccCcHHHHHHHHHHHHHcCCCcE--EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021545 149 H-IELISKEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 225 (311)
Q Consensus 149 e-V~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y--~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 225 (311)
. |..+...... ....+.+...+.+++.+...- .+..+..+. ..++ ..+.++.++- ..+|.||+ .
T Consensus 128 ~~i~~i~~~~~~--~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~--~ 194 (305)
T 3g1w_A 128 GEVAVITLPNQL--NHQERTTGFKETLEAEFPAIEVIAVEDGRGDS--LHSR-RVAHQLLEDY------PNLAGIFA--T 194 (305)
T ss_dssp EEEEEEECTTCH--HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCH--HHHH-HHHHHHHHHC------TTEEEEEE--S
T ss_pred cEEEEEeCCCcc--cHHHHHHHHHHHHHhhCCCCEEEEEecCCCCH--HHHH-HHHHHHHHhC------CCceEEEE--C
Confidence 4 5444322111 112233444455555443321 121222222 2333 3444555432 35888886 4
Q ss_pred cchhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 226 SGGTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 226 tGGt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
+...+.|+..++++.+. ++.|+|++-
T Consensus 195 ~d~~a~g~~~al~~~g~~~di~vig~d~ 222 (305)
T 3g1w_A 195 EANGGVGVGDAVRLESRAGEIQIISFDT 222 (305)
T ss_dssp SHHHHHHHHHHHHHTTCTTTSEEEEESC
T ss_pred CCcchhhHHHHHHhcCCCCCeEEEEeCC
Confidence 55678899999998875 688888864
No 66
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=75.61 E-value=44 Score=29.76 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=23.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|..-.+.|.+++++-..
T Consensus 48 ~~lVT-Ga-s~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 48 VAFIT-GA-ARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp EEEES-SC-SSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCeEEEEecc
Confidence 34554 54 4788999999999999998877544
No 67
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=75.29 E-value=3.9 Score=34.71 Aligned_cols=64 Identities=22% Similarity=0.262 Sum_probs=43.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..+..++ .....+..|+..|++|+..
T Consensus 122 ~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~tt 186 (204)
T 3hu5_A 122 RRRGVDTLLVSGT-QYPNCIRGTAVDAFALDYDVVVVTDACSARTPG--VAESNINDMRAMGITCVPL 186 (204)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECG
T ss_pred HhCCCCeEEEeee-ccchHHHHHHHHHHHCCCEEEEehhhhCCCCHH--HHHHHHHHHHHhCCEEEEH
Confidence 4579999998864 45555 578888999999999987654432110 1223466778889888643
No 68
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=74.56 E-value=33 Score=29.72 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=24.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+..
T Consensus 8 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 8 TLFIT-GA-SRGIGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEeccc
Confidence 34555 54 47899999999999999887776554
No 69
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=74.55 E-value=42 Score=29.10 Aligned_cols=55 Identities=15% Similarity=0.034 Sum_probs=32.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ +|--|+++|....+.|.+++++....... .......++..|.++..+.
T Consensus 33 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~ 87 (271)
T 3v2g_A 33 TAFVT-GG-SRGIGAAIAKRLALEGAAVALTYVNAAER------AQAVVSEIEQAGGRAVAIR 87 (271)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 34555 54 46789999999999999877765433210 0112334455676665554
No 70
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=74.32 E-value=47 Score=29.49 Aligned_cols=152 Identities=10% Similarity=0.032 Sum_probs=79.9
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHH--HHHHcCCcEEEEEcCCCccc-CCC-----CC--c--cchHHHHHHCCCE
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAV--AAKYLNLDCYLILRTSKVLV-DQD-----PG--L--IGNLLVERLVGAH 149 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~--~a~~~Gl~~~ivv~~~~~~~-~~~-----~~--~--~~n~~~~~~~GAe 149 (311)
+.+.++ .+++.|| |...+....+++- .+...+++++.+........ .+. +. . ..-...+..+|.+
T Consensus 65 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~ 142 (364)
T 3lop_A 65 VRDMARVDNPVALL--TVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVT 142 (364)
T ss_dssp HHHHHHHSCEEEEE--CCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhcCcEEEE--ecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCc
Confidence 444444 3666666 4455667788888 89999999776543221000 000 00 0 1112334456765
Q ss_pred -EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 150 -IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 150 -V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|..+. +..|. ....+...+.+++.|-.. ..++.+..+. .....+| .. ..+|.||++
T Consensus 143 ~iaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~~~~l----~~----~~~d~v~~~- 203 (364)
T 3lop_A 143 RIGVLYQEDALG----KEAITGVERTLKAHALAITAMASYPRNTANV------GPAVDKL----LA----ADVQAIFLG- 203 (364)
T ss_dssp CEEEEEETTHHH----HHHHHHHHHHHHTTTCCCSEEEEECTTSCCC------HHHHHHH----HH----SCCSEEEEE-
T ss_pred eEEEEEeCchhh----HHHHHHHHHHHHHcCCcEEEEEEecCCCccH------HHHHHHH----Hh----CCCCEEEEe-
Confidence 44442 22232 122344455555544321 1233332221 1222333 22 358988875
Q ss_pred CcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 225 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+.+..+.++...++..+.+.++++.......
T Consensus 204 ~~~~~a~~~~~~~~~~g~~~~~i~~~~~~~~ 234 (364)
T 3lop_A 204 ATAEPAAQFVRQYRARGGEAQLLGLSSIDPG 234 (364)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECTTSCHH
T ss_pred cCcHHHHHHHHHHHHcCCCCeEEEeccCChH
Confidence 4667889999999999988888877654433
No 71
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=73.87 E-value=43 Score=28.87 Aligned_cols=159 Identities=13% Similarity=-0.012 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc--CCCC----C--ccch--HHHHHHCC
Q 021545 78 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV--DQDP----G--LIGN--LLVERLVG 147 (311)
Q Consensus 78 kl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~--~~~~----~--~~~n--~~~~~~~G 147 (311)
+....+..+++++++.||..+ ...+........++..|++++++-....... ...+ . ..+. ...+...|
T Consensus 49 ~~~~~i~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g 127 (297)
T 3rot_A 49 KQVQFIESALATYPSGIATTI-PSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELT 127 (297)
T ss_dssp HHHHHHHHHHHTCCSEEEECC-CCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhc
Confidence 344557777888999888653 3333334445566778999887753322100 0000 0 0011 11222234
Q ss_pred ---CEEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021545 148 ---AHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 223 (311)
Q Consensus 148 ---AeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~ 223 (311)
-++..+... ... ....+.+...+.+++.+-....+. ...+ ...++ ....+++++- .++|.||+.
T Consensus 128 ~~~~~i~~i~g~~~~~--~~~~R~~Gf~~~l~~~g~~~~~~~-~~~~--~~~~~-~~~~~~l~~~------~~~~ai~~~ 195 (297)
T 3rot_A 128 PSAKRALVLNPQPGHI--GLEKRAYGIKTILQDKGIFFEELD-VGTD--PNQVQ-SRVKSYFKIH------PETNIIFCL 195 (297)
T ss_dssp TTCCEEEEEESCTTCH--HHHHHHHHHHHHHHHTTCEEEEEE-CCSC--HHHHH-HHHHHHHHHC------TTCCEEEES
T ss_pred CCCceEEEEeCCCCcH--HHHHHHHHHHHHHHhcCCeEEEee-cCCC--hHHHH-HHHHHHHHhC------CCCCEEEEc
Confidence 356555321 111 111233444555555432222222 2122 22333 3445555442 358998874
Q ss_pred CCcchhHHHHHHHHhhCC-----CCCeEEEEec
Q 021545 224 CGSGGTIAGLSLGSWLGT-----LKAKVHAFSV 251 (311)
Q Consensus 224 vGtGGt~aGl~~~~~~~~-----~~~rVigV~~ 251 (311)
+...+.|+..+++..+ .++.|+|++-
T Consensus 196 --~d~~A~g~~~al~~~g~~vP~~dv~vig~D~ 226 (297)
T 3rot_A 196 --TSQALDPLGQMLLHPDRYDFNYQPQVYSFDK 226 (297)
T ss_dssp --SHHHHHHHHHHHHSHHHHTCCCCCEEEEECC
T ss_pred --CCcchHHHHHHHHhcCCccCCCceEEEEeCC
Confidence 4677889999998865 3788999864
No 72
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=73.61 E-value=9.6 Score=31.53 Aligned_cols=62 Identities=24% Similarity=0.282 Sum_probs=43.4
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHH-CCCEEEEEc
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIELIS 154 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~-~GAeV~~v~ 154 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..+ ++.. ... ..|+. +|++|+...
T Consensus 106 ~~~gi~~lii~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as--~~~~--~~a-~~m~~~~ga~v~~~~ 169 (182)
T 3eef_A 106 RANGIDTVVLIGL-DADICVRHTAADALYRNYRIIVVEDAVAA--RIDP--NWK-DYFTRVYGATVKRSD 169 (182)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEEC--SSCT--THH-HHHHHHHCCEEECTT
T ss_pred HhcCCCeEEEEEe-ccCHHHHHHHHHHHHCCCEEEEehhhcCC--HHHH--HHH-HHHHHhcCcEEeEHH
Confidence 4578999998864 45555 57888899999999998766544 2221 233 66777 799887544
No 73
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=73.57 E-value=35 Score=30.15 Aligned_cols=32 Identities=22% Similarity=0.099 Sum_probs=23.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 33 ~vlVT-Ga-s~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 33 AAVVT-GG-ASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 44555 54 4788999999999999887766543
No 74
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=73.50 E-value=5.5 Score=34.24 Aligned_cols=63 Identities=14% Similarity=0.085 Sum_probs=42.6
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHH-CCCEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIEL 152 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~-~GAeV~~ 152 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+...+ .....+..|+. +|+.|+.
T Consensus 139 ~~~gi~~lvi~G-~~T~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~~~--~h~~aL~~m~~~~G~~i~t 203 (211)
T 3o94_A 139 RERRVSTVILTG-VLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPE--NHQFALGHFKNTLGAKLVD 203 (211)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTSCCEEEC
T ss_pred HhCCCCeEEEEe-eccChHHHHHHHHHHHCCCEEEEechhhcCCCHH--HHHHHHHHHHHHCCcEEec
Confidence 357899999886 445665 578888899999999887654432110 11234667777 8888764
No 75
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=73.42 E-value=38 Score=29.19 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=23.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
+++..|+ +|.-|+++|....+.|.+++++.+.
T Consensus 31 ~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 31 NVLITGA-SKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3443454 4789999999999999988777654
No 76
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=73.21 E-value=33 Score=29.03 Aligned_cols=31 Identities=19% Similarity=-0.018 Sum_probs=22.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|.-|+++|..-.+.|.+++++-+
T Consensus 11 ~vlIT-Ga-s~giG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 11 VGIVT-GS-GGGIGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEcC
Confidence 34555 54 478899999999999988766654
No 77
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.01 E-value=45 Score=28.72 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=24.8
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 10 gk~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVT-GG-ARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEe-CC-CChHHHHHHHHHHHCCCeEEEEccc
Confidence 3344565 54 4678999999999999998777554
No 78
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=72.97 E-value=40 Score=29.22 Aligned_cols=55 Identities=13% Similarity=0.021 Sum_probs=32.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ +|--|+++|....+.|.++++..+...... ......++..|.++..+.
T Consensus 30 ~vlVT-Ga-s~gIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 84 (269)
T 4dmm_A 30 IALVT-GA-SRGIGRAIALELAAAGAKVAVNYASSAGAA------DEVVAAIAAAGGEAFAVK 84 (269)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHHhcCCcEEEEE
Confidence 34554 54 477899999999999998877665332110 112334455666665554
No 79
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=72.73 E-value=44 Score=28.49 Aligned_cols=157 Identities=13% Similarity=-0.005 Sum_probs=74.8
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch--HHHHHHCCCE-E
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LLVERLVGAH-I 150 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n--~~~~~~~GAe-V 150 (311)
...++..+.+++++.||..+.. .+. .....++..|++++++-...... +..+....+. ...+...|.+ +
T Consensus 58 ~~~~~~~~~~~~vdgiIi~~~~-~~~--~~~~~l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i 134 (292)
T 3k4h_A 58 FNGVVKMVQGRQIGGIILLYSR-END--RIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQI 134 (292)
T ss_dssp HHHHHHHHHTTCCCEEEESCCB-TTC--HHHHHHHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHcCCCCEEEEeCCC-CCh--HHHHHHHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceE
Confidence 3445666667788888865432 222 34445567788877764332211 0000000011 1122334554 5
Q ss_pred EEEcCccccccCcHHHHHHHHHHHHHcCCC---cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 151 ELISKEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~---~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
.++....... ....+.+...+.+++.+.. .+++. +..+. ..+| ..+.+++++ ...+|.||+. +.
T Consensus 135 ~~i~~~~~~~-~~~~R~~gf~~~l~~~g~~~~~~~~~~-~~~~~--~~~~-~~~~~~l~~------~~~~~ai~~~--~d 201 (292)
T 3k4h_A 135 AFIGGGSDLL-VTRDRLAGMSDALKLADIVLPKEYILH-FDFSR--ESGQ-QAVEELMGL------QQPPTAIMAT--DD 201 (292)
T ss_dssp EEEESCTTBH-HHHHHHHHHHHHHHHTTCCCCGGGEEE-CCSSH--HHHH-HHHHHHHTS------SSCCSEEEES--SH
T ss_pred EEEeCcccch-hHHHHHHHHHHHHHHcCCCCChheEEe-cCCCH--HHHH-HHHHHHHcC------CCCCcEEEEc--Ch
Confidence 4443211000 1112233344455554321 11221 11122 1233 233344322 2468999864 56
Q ss_pred hhHHHHHHHHhhCC----CCCeEEEEec
Q 021545 228 GTIAGLSLGSWLGT----LKAKVHAFSV 251 (311)
Q Consensus 228 Gt~aGl~~~~~~~~----~~~rVigV~~ 251 (311)
..+.|+..++++.+ .++.|+|++-
T Consensus 202 ~~a~g~~~al~~~g~~vP~di~vig~d~ 229 (292)
T 3k4h_A 202 LIGLGVLSALSKKGFVVPKDVSIVSFNN 229 (292)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEEecC
Confidence 77889999999877 3677988863
No 80
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=72.55 E-value=37 Score=29.27 Aligned_cols=55 Identities=16% Similarity=0.048 Sum_probs=33.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ +|--|+++|..-.+.|.++++........ ...-...++..|.++..+.
T Consensus 20 ~~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 74 (270)
T 3is3_A 20 VALVT-GS-GRGIGAAVAVHLGRLGAKVVVNYANSTKD------AEKVVSEIKALGSDAIAIK 74 (270)
T ss_dssp EEEES-CT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 34554 54 46889999999999999888765443210 0112334555677776654
No 81
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=72.39 E-value=43 Score=28.46 Aligned_cols=31 Identities=26% Similarity=0.157 Sum_probs=23.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|.-|+++|..-.+.|.+.+++.+
T Consensus 9 ~~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 9 VALIT-GA-SSGIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 34555 54 478999999998889988776654
No 82
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=72.36 E-value=49 Score=28.90 Aligned_cols=55 Identities=15% Similarity=-0.023 Sum_probs=34.4
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
|...||| |++ +.-|+++|...++.|.+.+++-+.... ......++..|.++..+.
T Consensus 7 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vv~~~r~~~~--------~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 7 DKVVIVT-GGA-SGIGGAISMRLAEERAIPVVFARHAPD--------GAFLDALAQRQPRATYLP 61 (258)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESSCCC--------HHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCccc--------HHHHHHHHhcCCCEEEEE
Confidence 3344666 544 678999999999999988777654321 123444555666665554
No 83
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=72.25 E-value=36 Score=29.23 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=23.1
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+
T Consensus 11 ~k~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 11 DKVVVIS-GV-GPALGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TCEEEEE-SC-CTTHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEE-CC-CcHHHHHHHHHHHHCcCEEEEEeC
Confidence 3344555 54 467899999888888988766654
No 84
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=72.10 E-value=45 Score=28.56 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=23.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
..||| |+ +|--|+++|....+.|.+++++.+..
T Consensus 10 ~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~~~~ 42 (259)
T 3edm_A 10 TIVVA-GA-GRDIGRACAIRFAQEGANVVLTYNGA 42 (259)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 34555 54 46789999999889998877765443
No 85
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=72.09 E-value=41 Score=29.11 Aligned_cols=58 Identities=10% Similarity=-0.055 Sum_probs=34.5
Q ss_pred cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 89 QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 89 ~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.|...||| |+ +|--|+++|....+.|.++++......... ..-...++..|.++..+.
T Consensus 26 ~~k~~lVT-Ga-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 83 (267)
T 3u5t_A 26 TNKVAIVT-GA-SRGIGAAIAARLASDGFTVVINYAGKAAAA------EEVAGKIEAAGGKALTAQ 83 (267)
T ss_dssp -CCEEEEE-SC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHH------HHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHhcCCeEEEEE
Confidence 35445665 54 468899999999999998877654332110 112234455676665554
No 86
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=71.89 E-value=19 Score=32.18 Aligned_cols=147 Identities=14% Similarity=0.076 Sum_probs=77.7
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCC--CC-------C--c--cchHHHHHHCCC
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------G--L--IGNLLVERLVGA 148 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~--~~-------~--~--~~n~~~~~~~GA 148 (311)
+.+.++ .+++.|| |...+....+++-.+...+++++.+.......... .+ . . ..-...+..+|.
T Consensus 74 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 151 (375)
T 4evq_A 74 TTKLIQSEKADVLI--GTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGL 151 (375)
T ss_dssp HHCCCCCSCCSEEE--ECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCceEEE--cCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCC
Confidence 344444 3677777 33446677888889999999987654221100000 01 0 0 011233444576
Q ss_pred E-EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021545 149 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 223 (311)
Q Consensus 149 e-V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~ 223 (311)
+ |..+. +..|. ....+...+.+++.|-.. ..++.+..+. .....+|.+ ..+|.||+.
T Consensus 152 ~~ia~i~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~------~~~~~~l~~--------~~~dai~~~ 213 (375)
T 4evq_A 152 KKAVTVTWKYAAG----EEMVSGFKKSFTAGKGEVVKDITIAFPDVEF------QSALAEIAS--------LKPDCVYAF 213 (375)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCCC------HHHHHHHHH--------HCCSEEEEE
T ss_pred cEEEEEecCchHH----HHHHHHHHHHHHHcCCeEEEEEecCCCCccH------HHHHHHHHh--------cCCCEEEEe
Confidence 4 44443 22221 123344555566655321 1233332221 122233322 148988875
Q ss_pred CCcchhHHHHHHHHhhCCCCCeEEEEe
Q 021545 224 CGSGGTIAGLSLGSWLGTLKAKVHAFS 250 (311)
Q Consensus 224 vGtGGt~aGl~~~~~~~~~~~rVigV~ 250 (311)
+++..+.++...+++.+.++.+++..
T Consensus 214 -~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 214 -FSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp -CCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred -cCcchHHHHHHHHHHcCCCceEEecC
Confidence 55678999999999999889998875
No 87
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=71.86 E-value=4.8 Score=35.34 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=30.5
Q ss_pred cCCCEEEEeCCc--------------cchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 89 QGADCIITIGGI--------------QSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 89 ~G~~~vVt~g~s--------------~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
.|..-|||.|++ +|-.|.++|.+++..|.+++++....
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 355567786653 89999999999999999999887654
No 88
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=71.63 E-value=22 Score=31.31 Aligned_cols=56 Identities=14% Similarity=0.031 Sum_probs=32.7
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
|...||| |++ +--|+++|...++.|.++++.-+.... .......++..|.+++.+.
T Consensus 9 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vvi~~~~~~~-------~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 9 GKTALVT-GSA-RGLGFAYAEGLAAAGARVILNDIRATL-------LAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp TCEEEET-TCS-SHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHHHTTCCEEECC
T ss_pred CCEEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 4344565 544 678999999888888876554322110 1123445556677766654
No 89
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=71.24 E-value=9.8 Score=35.18 Aligned_cols=62 Identities=11% Similarity=-0.032 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
..++..+.+.|.+.+| .|+..|.-|.+++..|+.+|.+.+++.+. ..++..++.+||+.+..
T Consensus 161 ~~~~~~~~~~g~~vlV-~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~~~ 222 (379)
T 3iup_A 161 LGMVETMRLEGHSALV-HTAAASNLGQMLNQICLKDGIKLVNIVRK-----------QEQADLLKAQGAVHVCN 222 (379)
T ss_dssp HHHHHHHHHTTCSCEE-ESSTTSHHHHHHHHHHHHHTCCEEEEESS-----------HHHHHHHHHTTCSCEEE
T ss_pred HHHHHHhccCCCEEEE-ECCCCCHHHHHHHHHHHHCCCEEEEEECC-----------HHHHHHHHhCCCcEEEe
Confidence 3455555556655555 44335889999999999999986666532 24688889999985543
No 90
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=71.15 E-value=50 Score=28.50 Aligned_cols=32 Identities=31% Similarity=0.313 Sum_probs=24.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 12 ~~lVT-Ga-s~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 12 TALIT-GG-ARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CC-CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555 54 4678999999999999997777654
No 91
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=71.15 E-value=5.7 Score=33.67 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=40.3
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+...+ .+...+..++..|++|+
T Consensus 138 ~~~gi~~lvi~G-~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~~~~~~~~v~ 200 (207)
T 1nf9_A 138 RAAGRDQLVLCG-VYAHVGVLISTVDAYSNDIQPFLVADAIADFSEA--HHRMALEYAASRCAMVV 200 (207)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEE
T ss_pred HHcCCCEEEEEe-eecChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHhCcEEc
Confidence 357999999886 455655 578888999999999887655432110 01233555666677665
No 92
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=71.04 E-value=23 Score=30.26 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=24.0
Q ss_pred CEEEEeCCc-cchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s-~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |++ +|.-|+++|....+.|.+++++.+.
T Consensus 16 ~vlIT-Ga~~~~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 16 RILLT-GLLSNRSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp EEEEC-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEe-CCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence 34555 543 3678999999999999987777654
No 93
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=70.94 E-value=39 Score=29.47 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=24.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+..
T Consensus 11 ~vlVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 11 TMFIS-GG-SRGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 34555 54 46789999999999999887776554
No 94
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=70.91 E-value=30 Score=29.86 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=23.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |++ +--|+++|....+.|.+++++.+.
T Consensus 13 ~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~r~ 44 (262)
T 3ksu_A 13 VIVIA-GGI-KNLGALTAKTFALESVNLVLHYHQ 44 (262)
T ss_dssp EEEEE-TCS-SHHHHHHHHHHTTSSCEEEEEESC
T ss_pred EEEEE-CCC-chHHHHHHHHHHHCCCEEEEEecC
Confidence 34555 554 668899998888899887776543
No 95
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=70.69 E-value=11 Score=34.33 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=35.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |.-|++++..|+.+|.+.+++.+.. .++..++.+||+.+.
T Consensus 178 ~~VlV~G-a-G~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 178 TKVGVAG-F-GGLGSMAVKYAVAMGAEVSVFARNE-----------HKKQDALSMGVKHFY 225 (348)
T ss_dssp CEEEEES-C-SHHHHHHHHHHHHTTCEEEEECSSS-----------TTHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-cHHHHHHHHHHHHCCCeEEEEeCCH-----------HHHHHHHhcCCCeec
Confidence 4555566 3 8899999999999999755543321 257788899998765
No 96
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=70.42 E-value=13 Score=33.96 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=33.6
Q ss_pred HcCCC-EEEEeCCc----------------cchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 88 AQGAD-CIITIGGI----------------QSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 88 ~~G~~-~vVt~g~s----------------~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
-.|.+ .+||.|+| +|..|.++|-++...|.+++++.....
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 36777 78898876 599999999999999999998886543
No 97
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=70.31 E-value=39 Score=28.92 Aligned_cols=54 Identities=17% Similarity=0.006 Sum_probs=31.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ +|--|+++|....+.|.+++++-+.... .......++..|.++..+.
T Consensus 14 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 14 VAIVT-GA-AAGIGRAIAGTFAKAGASVVVTDLKSEG-------AEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp EEEEC-SC-SSHHHHHHHHHHHHHTCEEEEEESSHHH-------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 34554 54 4678999998888889887666543211 0112334455666665554
No 98
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=70.17 E-value=52 Score=28.21 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=23.6
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |+ +|--|+++|..-.+.|.+.++...
T Consensus 4 ~k~vlVT-Ga-s~gIG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 4 NKCALVT-GS-SRGVGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCEEEES-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEe-cC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 4344555 54 467899999998999988877643
No 99
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=70.15 E-value=58 Score=28.81 Aligned_cols=154 Identities=19% Similarity=0.174 Sum_probs=83.0
Q ss_pred HHHHHHHHcC-CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCC-------CC--ccch--HHHH-HHCC
Q 021545 81 FLMADAVAQG-ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD-------PG--LIGN--LLVE-RLVG 147 (311)
Q Consensus 81 ~ll~~a~~~G-~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~-------~~--~~~n--~~~~-~~~G 147 (311)
..+.+.++++ ++.|| |...+....+++-.+...+++.+............. +. ..+. ...+ +.+|
T Consensus 71 ~~~~~l~~~~~v~~ii--G~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g 148 (366)
T 3td9_A 71 NAAARAIDKEKVLAII--GEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLG 148 (366)
T ss_dssp HHHHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhccCCeEEEE--ccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhcC
Confidence 3455555554 78777 445567788889999999999876643221100001 10 0111 1223 3357
Q ss_pred CE-EEEE-c-CccccccCcHHHHHHHHHHHHHcCCCcE--EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021545 148 AH-IELI-S-KEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 222 (311)
Q Consensus 148 Ae-V~~v-~-~~~~~~~~~~~~~~~~~~~l~~~g~~~y--~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv 222 (311)
.+ |..+ . .+.|.. ...+...+.+++.|-... .++.+..+. .....+|.+ ..+|.||+
T Consensus 149 ~~~iaii~~~~~~~~~----~~~~~~~~~~~~~G~~v~~~~~~~~~~d~------~~~~~~l~~--------~~~d~v~~ 210 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSV----GLSNFFINKFTELGGQVKRVFFRSGDQDF------SAQLSVAMS--------FNPDAIYI 210 (366)
T ss_dssp CCEEEEEEETTCHHHH----HHHHHHHHHHHHTTCEEEEEEECTTCCCC------HHHHHHHHH--------TCCSEEEE
T ss_pred CcEEEEEEeCCCcHHH----HHHHHHHHHHHHCCCEEEEEEeCCCCccH------HHHHHHHHh--------cCCCEEEE
Confidence 54 5444 2 223421 122444455555443211 133322221 122333322 35898887
Q ss_pred eCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 223 ACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 223 ~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+ +.+..+.++...++..+.+..+++.+....+
T Consensus 211 ~-~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 242 (366)
T 3td9_A 211 T-GYYPEIALISRQARQLGFTGYILAGDGADAP 242 (366)
T ss_dssp C-SCHHHHHHHHHHHHHTTCCSEEEECGGGCST
T ss_pred c-cchhHHHHHHHHHHHcCCCceEEeeCCcCCH
Confidence 4 6778889999999999999999887655444
No 100
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=70.03 E-value=41 Score=29.83 Aligned_cols=33 Identities=24% Similarity=0.118 Sum_probs=24.2
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |++ +--|+++|...++.|.++++.-+
T Consensus 29 gKvalVT-Gas-~GIG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 29 AKIAVIT-GAT-SGIGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TCEEEEE-SCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEe-CcC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 4445666 544 57899999999999998776644
No 101
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=69.85 E-value=50 Score=27.93 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=32.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|--|+++|....+.|.+.++..+...... ......++..|.++..+.
T Consensus 7 ~lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 60 (246)
T 3osu_A 7 ALVT-GA-SRGIGRSIALQLAEEGYNVAVNYAGSKEKA------EAVVEEIKAKGVDSFAIQ 60 (246)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTSCEEEEE
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHHhcCCcEEEEE
Confidence 3454 54 478899999999999998877655332100 111233455666665554
No 102
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=69.75 E-value=60 Score=28.77 Aligned_cols=153 Identities=12% Similarity=0.054 Sum_probs=80.4
Q ss_pred HHHHHHHc-CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc---CCCC-------C--c--cchHHHHHHC
Q 021545 82 LMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV---DQDP-------G--L--IGNLLVERLV 146 (311)
Q Consensus 82 ll~~a~~~-G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~---~~~~-------~--~--~~n~~~~~~~ 146 (311)
.+.+.+++ +++.|| |...+....+++-.+.+.+++++.+........ ...+ . . ..-...+..+
T Consensus 80 ~~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 157 (386)
T 3sg0_A 80 NARKLLSEEKVDVLI--GSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKT 157 (386)
T ss_dssp HHHHHHHTSCCSEEE--CCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcCceEEE--CCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHHHHhc
Confidence 35555555 788777 445566778888899999999877643211000 0000 0 0 0112234446
Q ss_pred CCE-EEEEc-CccccccCcHHHHHHHHHHHHHcCCC---cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Q 021545 147 GAH-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 221 (311)
Q Consensus 147 GAe-V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~---~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~iv 221 (311)
|.+ |..+. +..|. ....+...+.+++.|-. ...++.+..+. .....+|.+ ..+|.||
T Consensus 158 g~~~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~------~~~~~~~~~--------~~~dav~ 219 (386)
T 3sg0_A 158 GAKKVGYIGFSDAYG----EGYYKVLAAAAPKLGFELTTHEVYARSDASV------TGQVLKIIA--------TKPDAVF 219 (386)
T ss_dssp TCCEEEEEEESSHHH----HHHHHHHHHHHHHHTCEECCCEEECTTCSCC------HHHHHHHHH--------TCCSEEE
T ss_pred CCCEEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCcH------HHHHHHHHh--------cCCCEEE
Confidence 754 44442 22221 12233444455554422 11233332221 112223322 2589888
Q ss_pred EeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 222 VACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 222 v~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
++ +.+..+.++...+++.+.+.+++++....+.
T Consensus 220 ~~-~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 252 (386)
T 3sg0_A 220 IA-SAGTPAVLPQKALRERGFKGAIYQTHGVATE 252 (386)
T ss_dssp EE-CCSGGGHHHHHHHHHTTCCSEEECCGGGCSH
T ss_pred Ee-cCcchHHHHHHHHHHcCCCCcEEeccccCCH
Confidence 75 4566788999999999888888876655444
No 103
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=69.50 E-value=5.7 Score=34.38 Aligned_cols=63 Identities=13% Similarity=0.003 Sum_probs=42.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..+...+ .+...+..|+..|+.|+.
T Consensus 134 ~~~gi~~lii~G~-~t~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~--~h~~aL~~~~~~~a~v~t 197 (223)
T 3tg2_A 134 RETGRDQLIITGV-YAHIGILSTALDAFMFDIQPFVIGDGVADFSLS--DHEFSLRYISGRTGAVKS 197 (223)
T ss_dssp HHHTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred HhcCcCceEEeec-ccChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHcCCEEec
Confidence 4579999998864 45555 588889999999999988765432111 123346667777887754
No 104
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=68.91 E-value=41 Score=29.42 Aligned_cols=33 Identities=27% Similarity=0.191 Sum_probs=23.0
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
+...||| |+ +|--|+++|....+.|.+++++-+
T Consensus 28 ~k~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 28 SPVALIT-GA-GSGIGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCEEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3344555 54 467889999888888887776654
No 105
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=68.44 E-value=56 Score=27.95 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=28.7
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCC----CCCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~----~~~rVigV~~~g 253 (311)
..+|.||+. +...+.|+..++++.+ .++.|+|++-..
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~~~ 227 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQSAE 227 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEESST
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecChH
Confidence 468999864 5677889999999877 367899988543
No 106
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=68.26 E-value=61 Score=28.33 Aligned_cols=56 Identities=18% Similarity=0.114 Sum_probs=33.9
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
...||| |+ +|--|+++|....+.|.+++++.+..... .......++..|.+++.+.
T Consensus 48 k~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~ 103 (291)
T 3ijr_A 48 KNVLIT-GG-DSGIGRAVSIAFAKEGANIAIAYLDEEGD------ANETKQYVEKEGVKCVLLP 103 (291)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCcEEEEE
Confidence 344565 54 46789999999999999877766543210 0111233455677766554
No 107
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=68.24 E-value=60 Score=28.21 Aligned_cols=31 Identities=23% Similarity=0.126 Sum_probs=22.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++.+
T Consensus 31 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 31 VAIVT-GG-RRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-cC-CCHHHHHHHHHHHHCCCeEEEEeC
Confidence 34555 54 467889999888889988777654
No 108
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=68.19 E-value=54 Score=27.64 Aligned_cols=31 Identities=23% Similarity=0.159 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+.+++.+.
T Consensus 16 vlIt-Ga-sggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 16 AIVT-GG-AQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEe-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4554 54 4789999999999999887776543
No 109
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=68.15 E-value=53 Score=28.06 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=22.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 9 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 9 VCLVT-GA-GGNIGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478999999998889988776654
No 110
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=67.84 E-value=42 Score=28.74 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=22.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|.++|....+.|.+++++.+.
T Consensus 31 ~vlIT-Ga-s~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 31 VAVVT-GA-SRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEECC
Confidence 34454 54 4678999998888899887666543
No 111
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=67.78 E-value=58 Score=27.97 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=22.7
Q ss_pred CCCEEEEeCCcc-chHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~-GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|..-||| |+++ .--|+++|...++.|.++++.-+.
T Consensus 6 gK~alVT-Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIM-GIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEE-CCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4445666 5432 247788888888888887766543
No 112
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=67.56 E-value=5.3 Score=34.07 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=43.7
Q ss_pred HHHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 86 AVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 86 a~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
..+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+..++ .+...+..|+..|++|+.
T Consensus 100 L~~~gi~~lvi~G-v~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~ 164 (208)
T 1yac_A 100 VKATGKKQLIIAG-VVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEI--TRHSAWDRMSQAGAQLMT 164 (208)
T ss_dssp HHHTTCSEEEEEE-BSCCCCCHHHHHHHHHTTCEEEEETTSCBCSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred HHhcCCCEEEEEE-eccchhHHHHHHHHHHCCCEEEEECcccCCCCHH--HHHHHHHHHHHcCCEEee
Confidence 3457999999886 445555 588888999999998887665432110 122346677788988864
No 113
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=67.16 E-value=61 Score=27.88 Aligned_cols=158 Identities=8% Similarity=-0.046 Sum_probs=77.4
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCC-ccch-------HHHHHHCCCE-E
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG-LIGN-------LLVERLVGAH-I 150 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~-~~~n-------~~~~~~~GAe-V 150 (311)
..++....+++++.||..+.. .+. .....++..|++++++-..........+. ...| ...+...|.+ +
T Consensus 58 ~~~~~~l~~~~vdGiI~~~~~-~~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I 134 (295)
T 3hcw_A 58 DEVYKMIKQRMVDAFILLYSK-END--PIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDEL 134 (295)
T ss_dssp HHHHHHHHTTCCSEEEESCCC-TTC--HHHHHHHHTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHhCCcCEEEEcCcc-cCh--HHHHHHHhCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcCCccE
Confidence 345666667788888876432 221 33344567788887764332211000000 0011 1122224553 4
Q ss_pred EEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchh
Q 021545 151 ELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 229 (311)
Q Consensus 151 ~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt 229 (311)
..+... .+. ...++.+...+.+++.+-...++.. ..+. ..|| ..+.++.++.+. ...+|.||+ .+..+
T Consensus 135 ~~i~~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~~-~~~~--~~~~-~~~~~~l~~~~~---~~~~~ai~~--~~d~~ 203 (295)
T 3hcw_A 135 IFITEKGNFE--VSKDRIQGFETVASQFNLDYQIIET-SNER--EVIL-NYMQNLHTRLKD---PNIKQAIIS--LDAML 203 (295)
T ss_dssp EEEEESSCCH--HHHHHHHHHHHHHHHTTCEEEEEEE-CSCH--HHHH-HHHHHHHHHHTC---TTSCEEEEE--SSHHH
T ss_pred EEEcCCccch--hHHHHHHHHHHHHHHcCCCeeEEec-cCCH--HHHH-HHHHHHHhhccc---CCCCcEEEE--CChHH
Confidence 444321 111 1122334444555554422222221 1122 2333 345566665421 125888886 56678
Q ss_pred HHHHHHHHhhCCC----CCeEEEEec
Q 021545 230 IAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 230 ~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
+.|+..++++.+. ++.|+|++-
T Consensus 204 A~g~~~al~~~g~~vP~di~vig~D~ 229 (295)
T 3hcw_A 204 HLAILSVLYELNIEIPKDVMTATFND 229 (295)
T ss_dssp HHHHHHHHHHTTCCTTTTEEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCceEEEEeCC
Confidence 8999999998873 567888874
No 114
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=67.15 E-value=53 Score=28.53 Aligned_cols=34 Identities=21% Similarity=0.112 Sum_probs=23.3
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 24 ~k~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVT-GV-SSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4344565 54 4678899998888889887666543
No 115
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=67.14 E-value=5.6 Score=33.77 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=41.3
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..+...+ .+...+..++ .|++|+
T Consensus 116 ~~~gi~~lvi~G~-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~l~-~~a~v~ 177 (204)
T 3hb7_A 116 KEEGIDTVVLTGV-WTNVCVRSTATDALANAYKVITLSDGTASKTEE--MHEYGLNDLS-IFTKVM 177 (204)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHH-HHSEEE
T ss_pred HHCCCCEEEEEee-cccHHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHH-hCCEEe
Confidence 4579999998864 45555 578888999999999987655432110 0223466677 788775
No 116
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=67.11 E-value=8.3 Score=33.67 Aligned_cols=63 Identities=16% Similarity=0.112 Sum_probs=42.9
Q ss_pred HHcCCCEEEEeCCccchHHH-HHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 87 VAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg~-AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.+.|+++||.+| ...|.|. ++|.-|..+|++++++.+-..+..++ .....+..|+..|++|+.
T Consensus 155 ~~~gi~~lvi~G-~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~aL~~m~~~~a~v~t 218 (236)
T 3ot4_A 155 AQRGVQTLLVAG-ATTSGCVRASVVDAMSAGFRPLVLSDCVGDRALG--PHEANLFDMRQKYAAVMT 218 (236)
T ss_dssp HHTTCCEEEEEE-SCTTTHHHHHHHHHHHHTCEEEEEEEEECCSCHH--HHHHHHHHHHHHTSEEEC
T ss_pred HHCCCCEEEEeC-ccCcHHHHHHHHHHHHCCCEEEEechhcCCCCHH--HHHHHHHHHHhcCCEEee
Confidence 457899999886 4556665 88999999999999987655432110 012345666777887764
No 117
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=66.97 E-value=61 Score=27.81 Aligned_cols=55 Identities=13% Similarity=0.031 Sum_probs=32.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.||| |+ +|.-|.++|....+.|.++++........ .......++..|.++..+.-
T Consensus 29 vlIT-Ga-s~gIG~a~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 29 VLVT-GG-SRGIGAAVCRLAARQGWRVGVNYAANREA------ADAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCChhH------HHHHHHHHHhcCCcEEEEEc
Confidence 3454 54 47899999999999999876664433210 01112334556777666543
No 118
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=66.69 E-value=59 Score=28.51 Aligned_cols=31 Identities=16% Similarity=-0.075 Sum_probs=22.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 36 ~vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 36 IALVT-GA-SYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478999999988889988776654
No 119
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=66.67 E-value=35 Score=29.24 Aligned_cols=31 Identities=29% Similarity=0.246 Sum_probs=22.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 9 vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 9 VIIT-GG-SSGMGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3454 54 4678999999999999887766543
No 120
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=66.65 E-value=57 Score=28.21 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=23.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 24 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 24 VALVT-GA-TSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4789999999999999887776543
No 121
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=66.18 E-value=49 Score=27.80 Aligned_cols=53 Identities=9% Similarity=-0.113 Sum_probs=31.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|--|.++|....+.|.+++++.+..... ......++..|.++..+.
T Consensus 8 vlIT-Ga-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 8 ALVT-GA-SRGIGFEVAHALASKGATVVGTATSQASA-------EKFENSMKEKGFKARGLV 60 (247)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHHHHTTCCEEEEE
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCceEEEE
Confidence 3454 54 47889999999999998877766543210 112334445566665554
No 122
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=65.98 E-value=60 Score=27.37 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=22.8
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|--|+++|....+.|.+.+++.+
T Consensus 7 vlVT-Ga-s~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 7 ALVT-GA-SRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478999999999999988777665
No 123
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=65.96 E-value=39 Score=31.78 Aligned_cols=48 Identities=8% Similarity=0.009 Sum_probs=36.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.+||.+|. |..|+.+|..-...|++++++-.+. .++..++..|..++.
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~-----------~~v~~~~~~g~~vi~ 52 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDP-----------DHIETLRKFGMKVFY 52 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCH-----------HHHHHHHHTTCCCEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCH-----------HHHHHHHhCCCeEEE
Confidence 45666774 8999999999999999988874321 356777888887665
No 124
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=65.91 E-value=64 Score=27.65 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=27.5
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCC-CCeEEEEec
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
.+|.||+ .+...+.|+..++++.+. ++.|+|++-
T Consensus 203 ~~~ai~~--~~d~~a~g~~~al~~~g~~di~vig~d~ 237 (309)
T 2fvy_A 203 KIEVVIA--NNDAMAMGAVEALKAHNKSSIPVFGVDA 237 (309)
T ss_dssp GCCEEEE--SSHHHHHHHHHHHHHTTCTTSCEECSBC
T ss_pred CccEEEE--CCchhHHHHHHHHHHcCCCCceEEecCC
Confidence 5899987 456788999999999887 788887754
No 125
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.58 E-value=57 Score=28.20 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=23.0
Q ss_pred CEEEEeCCccch--HHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GN--hg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
..||| |++ |+ -|+++|..-.+.|.+++++.+..
T Consensus 28 ~vlVT-Gas-g~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 28 KILIT-GLL-SNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp EEEEC-CCC-STTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEE-CCC-CCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 34554 543 45 89999998888998877765543
No 126
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=65.39 E-value=67 Score=27.76 Aligned_cols=54 Identities=15% Similarity=-0.024 Sum_probs=34.6
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.||| |+ +|--|+++|....+.|.+++++-+.... ...-...++..|.++..+.-
T Consensus 7 ~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~ 60 (264)
T 3tfo_A 7 ILIT-GA-SGGIGEGIARELGVAGAKILLGARRQAR-------IEAIATEIRDAGGTALAQVL 60 (264)
T ss_dssp EEES-ST-TSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEe-CC-ccHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEc
Confidence 3554 54 4788999999999999997776544221 01123445566888776643
No 127
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=65.15 E-value=56 Score=28.30 Aligned_cols=31 Identities=19% Similarity=0.051 Sum_probs=22.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++-+
T Consensus 30 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 30 VAIVT-GA-SRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34454 54 467889999888888988776654
No 128
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=64.64 E-value=5.9 Score=33.26 Aligned_cols=62 Identities=16% Similarity=0.086 Sum_probs=39.3
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+..++ .+...+..++..|++|+
T Consensus 128 ~~~gi~~lvi~G-~~T~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~--~h~~al~~~~~~~~~v~ 190 (199)
T 1j2r_A 128 RRRGIDTIVLCG-ISTNIGVESTARNAWELGFNLVIAEDACSAASAE--QHNNSINHIYPRIARVR 190 (199)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEEBSSHH--HHHHHHHHTHHHHSEEE
T ss_pred HHCCCCEEEEEe-eeccHHHHHHHHHHHHCCCEEEEehhhcCCCCHH--HHHHHHHHHHHheeEEe
Confidence 457999999886 445655 578888999999999887665432110 01223444555566665
No 129
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=64.22 E-value=18 Score=32.48 Aligned_cols=52 Identities=21% Similarity=0.169 Sum_probs=39.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
++|+..|+ |--|...+.+|+.+|.+.++++.... .++.+++.+||+.+....
T Consensus 162 ~~VlV~Ga--G~vG~~aiq~ak~~G~~~vi~~~~~~----------~k~~~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 162 KNVIIIGA--GTIGLLAIQCAVALGAKSVTAIDISS----------EKLALAKSFGAMQTFNSS 213 (346)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCH----------HHHHHHHHTTCSEEEETT
T ss_pred CEEEEECC--CCcchHHHHHHHHcCCcEEEEEechH----------HHHHHHHHcCCeEEEeCC
Confidence 55665664 66899999999999999888775432 468889999998765443
No 130
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=64.10 E-value=70 Score=27.46 Aligned_cols=31 Identities=23% Similarity=0.098 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|.++|....+.|.+++++.+.
T Consensus 34 vlIT-Ga-sggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 34 VLIT-GA-GHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEEcC
Confidence 3454 54 4789999999999999887776543
No 131
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=63.91 E-value=8.9 Score=34.21 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=42.9
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-......+ .+...+..++..|++|+..
T Consensus 141 ~~~gi~~lvi~G-v~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~~~~v~~t 205 (287)
T 2fq1_A 141 KESGRNQLIITG-VYAHIGCMTTATDAFMRDIKPFMVADALADFSRD--EHLMSLKYVAGRSGRVVMT 205 (287)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECH
T ss_pred HHCCCCEEEEEE-eCcchHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHHHhCcEEeeH
Confidence 457999999886 445544 578888899999999987665432110 1123355666778887644
No 132
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.78 E-value=18 Score=33.23 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=36.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|+ +|.-|++++.+|+.+|.+.+.+. . . .++.+++.+||+.++-
T Consensus 166 ~~VlV~Ga-~G~vG~~a~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 166 VYVLVYGG-STATATVTMQMLRLSGYIPIATC-S-P----------HNFDLAKSRGAEEVFD 214 (371)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCEEEEEe-C-H----------HHHHHHHHcCCcEEEE
Confidence 45655554 57899999999999999876654 2 1 3578889999986543
No 133
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=63.52 E-value=57 Score=27.93 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=22.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++-+
T Consensus 12 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 12 SVVVT-GG-TKGIGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 33454 54 467899999888888887766654
No 134
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=63.51 E-value=71 Score=27.39 Aligned_cols=32 Identities=25% Similarity=0.131 Sum_probs=24.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|.++|....+.|.+++++-+.
T Consensus 15 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 15 VAFIT-GA-ARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCeEEEEecc
Confidence 34555 54 4678999999999999998777554
No 135
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=63.19 E-value=74 Score=27.47 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=23.4
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 32 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 32 ALVT-GA-GRGIGREMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3554 54 4789999999999999987776654
No 136
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=63.06 E-value=70 Score=27.18 Aligned_cols=33 Identities=12% Similarity=-0.014 Sum_probs=22.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |++.+--|.++|....+.|.+++++-+.
T Consensus 24 ~vlIT-Gasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVT-AAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEES-SCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 33554 6543468999999888899887666543
No 137
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=62.86 E-value=4.4 Score=34.51 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=41.8
Q ss_pred HHHHHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHH--HCCCEEE
Q 021545 84 ADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER--LVGAHIE 151 (311)
Q Consensus 84 ~~a~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~--~~GAeV~ 151 (311)
.+.++ |+++||.+|- ..|.| .++|.-|..+|++++++.+-..+..++ .....+..++ ..|++|+
T Consensus 101 ~~~L~-gi~~lvi~Gv-~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~--~h~~aL~~m~~~~~g~~v~ 167 (200)
T 1x9g_A 101 EELLE-DVDNAVVFGI-EGHACILQTVADLLDMNKRVFLPKDGLGSQKKT--DFKAAIKLMSSWGPNCEIT 167 (200)
T ss_dssp HHTTT-TCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEGGGEECSSHH--HHHHHHHHHHTSCSSEEEE
T ss_pred HHHhC-CCCEEEEEEE-ecCcHHHHHHHHHHhCCCEEEEeCCCcCCCCHH--HHHHHHHHHHhhCCCeEEe
Confidence 34445 9999998864 45555 578888999999998887654432110 0123356677 7787765
No 138
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=62.85 E-value=14 Score=33.56 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=36.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.
T Consensus 161 ~~VlV~Ga-sg~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 161 ETVLVLGA-AGGIGTAAIQIAKGMGAKVIAVVNRT-----------AATEFVKSVGADIVL 209 (342)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCcEEe
Confidence 55665654 57899999999999999876665432 257778889998655
No 139
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=62.22 E-value=77 Score=27.32 Aligned_cols=35 Identities=11% Similarity=-0.097 Sum_probs=27.8
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
..||.||+ .+..++.|+..++++.+. ++.|+|++-
T Consensus 201 ~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D~ 239 (305)
T 3huu_A 201 HMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFNT 239 (305)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEECC
Confidence 46899987 466788899999998773 678998874
No 140
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=62.20 E-value=18 Score=30.40 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++ ....||||.+.+........+..+++
T Consensus 67 ~~~~~~a~~----~g~~ViIa~AG~aahLpGvvAa~----T~~PVIGVPv~s~~l~G~DsLlSivQ 124 (181)
T 4b4k_A 67 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAK----TNLPVIGVPVQSKALNGLDSLLSIVQ 124 (181)
T ss_dssp HHHHHHTTT----TTCCEEEEEECSSCCHHHHHHTT----CCSCEEEEECCCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----cCceEEEEeccccccchhhHHhc----CCCCEEEEecCCCCccchhhHHHHHh
Confidence 345554432 34889999999999999999886 45689999998766555554444443
No 141
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=61.89 E-value=74 Score=27.03 Aligned_cols=30 Identities=27% Similarity=0.185 Sum_probs=22.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 10 AVIT-GS-SSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 3555 54 478899999988888988776654
No 142
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=61.66 E-value=21 Score=32.98 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=35.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..| + |--|+..+.+|+.+|.+-++.+... ..++.+++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlAk~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 187 STVYVAG-A-GPVGLAAAASARLLGAAVVIVGDLN----------PARLAHAKAQGFEIA 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEEESC----------HHHHHHHHHTTCEEE
T ss_pred CEEEEEC-C-cHHHHHHHHHHHHCCCCeEEEEcCC----------HHHHHHHHHcCCcEE
Confidence 4565566 3 8899999999999999655555332 246788899999843
No 143
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=61.59 E-value=82 Score=27.46 Aligned_cols=152 Identities=13% Similarity=0.010 Sum_probs=81.4
Q ss_pred HHHHHHHc-CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC-------C--c--cchHHHHHHCCCE
Q 021545 82 LMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-------G--L--IGNLLVERLVGAH 149 (311)
Q Consensus 82 ll~~a~~~-G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~-------~--~--~~n~~~~~~~GAe 149 (311)
.+.+.+++ +++.|| |...+....+++-.+...+++++.+... .......+ . . ..-...+..+|.+
T Consensus 60 ~~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 136 (362)
T 3snr_A 60 NARRFVTESKADVIM--GSSVTPPSVAISNVANEAQIPHIALAPL-PITPERAKWSVVMPQPIPIMGKVLYEHMKKNNVK 136 (362)
T ss_dssp HHHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCC-CCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhccCceEEE--cCCCcHHHHHHHHHHHHcCccEEEecCC-ccccCCCCcEEecCCChHHHHHHHHHHHHhcCCC
Confidence 34555555 788888 3344566778888899999998765432 10000011 0 0 0112334456765
Q ss_pred -EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 150 -IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 150 -V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|..+. +..|. ....+...+.+++.|-.. ..++.+..+ +.....+|.+ ..+|.||++
T Consensus 137 ~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~--------~~~dav~~~- 197 (362)
T 3snr_A 137 TVGYIGYSDSYG----DLWFNDLKKQGEAMGLKIVGEERFARPDTS------VAGQALKLVA--------ANPDAILVG- 197 (362)
T ss_dssp EEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSC------CHHHHHHHHH--------HCCSEEEEE-
T ss_pred EEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEeecCCCCCC------HHHHHHHHHh--------cCCCEEEEe-
Confidence 44442 22221 123344455566655321 123332222 1122233332 148988875
Q ss_pred CcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 225 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+.+..+.++...+++.+.+.+++++....+.
T Consensus 198 ~~~~~a~~~~~~~~~~g~~~p~i~~~g~~~~ 228 (362)
T 3snr_A 198 ASGTAAALPQTTLRERGYNGLIYQTHGAASM 228 (362)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEECGGGCSH
T ss_pred cCcchHHHHHHHHHHcCCCccEEeccCcCcH
Confidence 4567889999999999988888776655444
No 144
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=61.43 E-value=77 Score=27.05 Aligned_cols=32 Identities=31% Similarity=0.236 Sum_probs=23.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 15 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 15 VVLIT-GG-GSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4788999999888889887766543
No 145
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=61.40 E-value=72 Score=26.71 Aligned_cols=161 Identities=10% Similarity=0.057 Sum_probs=80.0
Q ss_pred HHHHHHHHHHcC-CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch---HHHHHHC---
Q 021545 79 LEFLMADAVAQG-ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLV--- 146 (311)
Q Consensus 79 l~~ll~~a~~~G-~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n---~~~~~~~--- 146 (311)
....+..+.+++ ++.||..+. ...........++..|++++++-...... +..+....+. ..+.+.+
T Consensus 47 ~~~~i~~l~~~~~vdgii~~~~-~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~ 125 (276)
T 3ksm_A 47 QIQILSYHLSQAPPDALILAPN-SAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLDLS 125 (276)
T ss_dssp HHHHHHHHHHHSCCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHhCCCCEEEEeCC-CHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcCcC
Confidence 344577777888 999987642 22333445556777899988874332110 0000000111 1223333
Q ss_pred CCE-EEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021545 147 GAH-IELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 225 (311)
Q Consensus 147 GAe-V~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 225 (311)
|.. +..+.... .......+.+...+.+++. +..-+......+.....++ ..+.++.++- .++|.||+.
T Consensus 126 G~~~i~~i~~~~-~~~~~~~R~~gf~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~-- 194 (276)
T 3ksm_A 126 KERNIALLRLRA-GNASTDQREQGFLDVLRKH-DKIRIIAAPYAGDDRGAAR-SEMLRLLKET------PTIDGLFTP-- 194 (276)
T ss_dssp SCEEEEECBCCT-TCHHHHHHHHHHHHHHTTC-TTEEEEECCBCCSSHHHHH-HHHHHHHHHC------SCCCEEECC--
T ss_pred CCceEEEEEcCC-CchhHHHHHHHHHHHHHhC-CCcEEEEEecCCCcHHHHH-HHHHHHHHhC------CCceEEEEC--
Confidence 444 55554321 1001112333344444443 1221111111122222343 3444555432 358988864
Q ss_pred cchhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 226 SGGTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 226 tGGt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
+..++.|+..++++.+. ++.|+|++-
T Consensus 195 ~d~~a~g~~~al~~~g~p~di~vig~d~ 222 (276)
T 3ksm_A 195 NESTTIGALVAIRQSGMSKQFGFIGFDQ 222 (276)
T ss_dssp SHHHHHHHHHHHHHTTCTTSSEEEEESC
T ss_pred CchhhhHHHHHHHHcCCCCCeEEEEeCC
Confidence 56788899999998873 778888764
No 146
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=61.37 E-value=75 Score=26.94 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=22.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|....+.|.+.+++.+
T Consensus 5 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 5 AMVT-GG-AQGIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3555 54 478899999988888988766654
No 147
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=61.25 E-value=24 Score=31.41 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=35.9
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
|+..| .+|.-|++++..|+.+|.+.+++.+.. .+...++.+||+.+.
T Consensus 150 VlV~G-a~G~vG~~aiqla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 150 VVVTG-ASGGVGSTAVALLHKLGYQVAAVSGRE-----------STHGYLKSLGANRIL 196 (324)
T ss_dssp EEESS-TTSHHHHHHHHHHHHTTCCEEEEESCG-----------GGHHHHHHHTCSEEE
T ss_pred EEEEC-CCcHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 55555 458899999999999999877766432 367788899998655
No 148
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=61.11 E-value=80 Score=27.14 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=23.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 23 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 23 TALVT-GG-SKGIGYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4788999999999999887766543
No 149
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=61.11 E-value=78 Score=27.01 Aligned_cols=55 Identities=16% Similarity=0.059 Sum_probs=32.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ +|--|+++|....+.|.+.++........ .......++..|.++..+.
T Consensus 28 ~vlVT-Ga-s~gIG~~la~~l~~~G~~v~i~~~r~~~~------~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 28 SVLVT-GA-SKGIGRAIARQLAADGFNIGVHYHRDAAG------AQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCceEEEE
Confidence 33454 54 47789999999999999887765443211 0122334455566655544
No 150
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=61.04 E-value=72 Score=27.10 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=24.7
Q ss_pred CEEEEeCCcc-chHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~-GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
++++..|+++ +--|+++|....+.|.+++++.+..
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence 3344346553 6789999999999998887776543
No 151
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=61.01 E-value=55 Score=27.22 Aligned_cols=31 Identities=26% Similarity=0.128 Sum_probs=22.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|.++|....+.|.+++++.+.
T Consensus 5 vlIT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 5 AVIT-GA-SRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 54 4678999999999999887666543
No 152
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=60.93 E-value=74 Score=27.86 Aligned_cols=35 Identities=17% Similarity=0.108 Sum_probs=23.9
Q ss_pred CCCEEEEeCCcc-chHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~-GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+++ .--|+++|....+.|.+++++-+.
T Consensus 30 ~k~vlVT-Gasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVII-GVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEE-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-eCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344565 5543 478889999888899887666543
No 153
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=60.85 E-value=81 Score=27.12 Aligned_cols=32 Identities=25% Similarity=0.158 Sum_probs=23.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 13 ~~lVT-Ga-s~GIG~a~a~~la~~G~~V~~~~r~ 44 (277)
T 3tsc_A 13 VAFIT-GA-ARGQGRAHAVRMAAEGADIIAVDIA 44 (277)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEE-CC-ccHHHHHHHHHHHHcCCEEEEEecc
Confidence 34555 54 4678999999999999988877543
No 154
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=60.65 E-value=77 Score=26.83 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=22.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 5 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 5 ALVT-GA-GQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3555 54 477899999988889988776654
No 155
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=60.32 E-value=18 Score=32.94 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=34.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.
T Consensus 181 ~~VlV~Ga--G~vG~~~~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 181 KKVGIVGL--GGIGSMGTLISKAMGAETYVISRSS-----------RKREDAMKMGADHYI 228 (360)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSS-----------TTHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEcCCH-----------HHHHHHHHcCCCEEE
Confidence 56665664 7899999999999999854444322 246777889998654
No 156
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=60.23 E-value=56 Score=28.49 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=21.3
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |+ +|--|+++|....+.|.+++++-+
T Consensus 33 gk~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 33 GRIALVT-GG-GTGVGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp -CEEEET-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 3334554 54 467888888888888887666543
No 157
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=59.69 E-value=12 Score=32.58 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=28.6
Q ss_pred CCCEEEEeCC--------------ccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGG--------------IQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~--------------s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...|||.|+ |+|-.|.++|.+++..|.+++++...
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4456777654 37899999999999999999887543
No 158
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=59.34 E-value=11 Score=32.70 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=41.5
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCC--------CCC-ccchHHHHHHCCCEEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQ--------DPG-LIGNLLVERLVGAHIEL 152 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~--------~~~-~~~n~~~~~~~GAeV~~ 152 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..+.-.+ .+. ....+..++..||+|+.
T Consensus 135 ~~~gi~~lvi~G~-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~d~~~~~~~~~~~~~~h~~aL~~l~~~~a~V~t 209 (233)
T 3irv_A 135 RARDVDTIIVCGT-VTNVCCETTIRDGVHREYKVIALSDANAAMDYPDVGFGAVSAADVQRISLTTIAYEFGEVTT 209 (233)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECCCBCCSSSCCBCHHHHHHHHHHHHHHHTSEEEC
T ss_pred HhCCCCeEEEEee-cccHHHHHHHHHHHHCCCEEEEechhhccCcccccccccCChHHHHHHHHHHHHhcCcEEeE
Confidence 4579999998874 45555 578889999999999887654431000 000 12245566667877753
No 159
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=59.07 E-value=15 Score=32.77 Aligned_cols=47 Identities=6% Similarity=-0.067 Sum_probs=35.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|.+.+.+. .. .+..+++.+||+.+.
T Consensus 144 ~~VlV~Ga--G~vG~~a~qlak~~Ga~Vi~~~--~~----------~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 144 REVLIVGF--GAVNNLLTQMLNNAGYVVDLVS--AS----------LSQALAAKRGVRHLY 190 (315)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEC--SS----------CCHHHHHHHTEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEE--Ch----------hhHHHHHHcCCCEEE
Confidence 56666665 8999999999999999766554 21 257788899998665
No 160
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=58.96 E-value=71 Score=27.16 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=22.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|--|+++|....+.|.+++++.+
T Consensus 8 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 8 CVVT-GA-SRGIGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp EEES-ST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 467999999998899988776654
No 161
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=58.96 E-value=15 Score=32.56 Aligned_cols=62 Identities=16% Similarity=0.023 Sum_probs=41.5
Q ss_pred HHcCCCEEEEeCCccchHHH-HHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg~-AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+| ...|.|. ++|.-|..+|++++++.+-..+..++ .+...+..|+..++.|+
T Consensus 160 r~~gi~~lvI~G-v~T~~CV~~Ta~dA~~~Gy~V~Vv~DA~as~~~~--~h~~aL~~m~~~~~~vi 222 (264)
T 1nba_A 160 TSNRIDTLIVTG-ATAAGCVRHTVEDAIAKGFRPIIPRETIGDRVPG--VVQWNLYDIDNKFGDVE 222 (264)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEEEGGGEECSSSS--HHHHHHHHHHHHTCEEE
T ss_pred HhCCCCEEEEEe-cCcCCHHHHHHHHHHHCCCEEEEeccccCCCCHH--HHHHHHHHHHhcCcEEe
Confidence 457999999886 5567776 88999999999998887654432111 12233555666666665
No 162
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=58.89 E-value=1e+02 Score=27.57 Aligned_cols=32 Identities=28% Similarity=0.261 Sum_probs=24.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
.+|| |+ +|--|+++|....+.|.++++.++..
T Consensus 8 vlVT-Ga-s~GIG~aia~~L~~~G~~V~~~~r~~ 39 (324)
T 3u9l_A 8 ILIT-GA-SSGFGRLTAEALAGAGHRVYASMRDI 39 (324)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEecCcc
Confidence 3444 54 47899999999999999988877653
No 163
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=58.87 E-value=79 Score=28.00 Aligned_cols=32 Identities=22% Similarity=0.043 Sum_probs=23.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 29 ~vlVT-Ga-s~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 29 VVIVT-GA-GGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 34554 54 4788999999999999988777543
No 164
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=58.80 E-value=72 Score=28.06 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=22.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|.++|....+.|.+++++-+.
T Consensus 44 vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 44 VLVT-GG-TKGIGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3454 54 4678999999888999887776544
No 165
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=58.75 E-value=83 Score=27.09 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=22.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+
T Consensus 13 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 13 TYLVT-GG-GSGIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478899999988889988776654
No 166
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=58.72 E-value=71 Score=27.53 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=22.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 9 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 9 VIIT-GS-SNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999988888988777654
No 167
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=58.65 E-value=88 Score=26.84 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=23.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 24 ~lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 24 ALVT-GG-SRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 54 4789999999999999887776543
No 168
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=58.54 E-value=23 Score=32.47 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=35.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|.+++.+|+.+|.+-++++... ..+..+++.+||+.+.
T Consensus 184 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 232 (370)
T 4ej6_A 184 STVAILGG--GVIGLLTVQLARLAGATTVILSTRQ----------ATKRRLAEEVGATATV 232 (370)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSC----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHcCCCEEE
Confidence 45555664 7899999999999999655555332 2467788999998654
No 169
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=58.52 E-value=85 Score=26.67 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=27.7
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEecc
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~ 252 (311)
..+|.||+ .+...+.|+..++++.+. ++.|+|++-.
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 224 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNL 224 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCC
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCc
Confidence 46899986 556778899999988763 6788888744
No 170
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=58.31 E-value=20 Score=32.15 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=37.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+...
T Consensus 150 ~~vlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 150 DYVLLFAA-AGGVGLILNQLLKMKGAHTIAVASTD-----------EKLKIAKEYGAEYLINA 200 (334)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEEET
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEEeC
Confidence 45665654 47899999999999999866665421 35778889999866543
No 171
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=57.82 E-value=82 Score=26.27 Aligned_cols=31 Identities=23% Similarity=0.057 Sum_probs=23.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|.++|..-.+.|.+++++.+.
T Consensus 10 vlVT-Ga-sggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 10 VLIT-GS-SQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEe-CC-CChHHHHHHHHHHHCCCEEEEECCC
Confidence 3444 54 5789999999999999987777654
No 172
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=57.79 E-value=83 Score=26.28 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCC---CCCeEEEEecc
Q 021545 200 AIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT---LKAKVHAFSVC 252 (311)
Q Consensus 200 ~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~---~~~rVigV~~~ 252 (311)
...+++++-+ ..+|.||+. +...+.|+..++++.+ .++.|+|++-.
T Consensus 169 ~~~~~l~~~~-----~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~ 217 (272)
T 3o74_A 169 LMQQLIDDLG-----GLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDN 217 (272)
T ss_dssp HHHHHHHHHT-----SCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCC
T ss_pred HHHHHHhcCC-----CCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCCh
Confidence 4455555432 158999874 5677889999999987 47889988754
No 173
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=57.78 E-value=53 Score=28.81 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=23.4
Q ss_pred CCCEEEEeCCccch--HHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GN--hg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |++ |. -|+++|....+.|.+++++.+.
T Consensus 31 gk~~lVT-Gas-g~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 31 GKRGLIL-GVA-NNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TCEEEEE-CCC-SSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEE-cCC-CCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 3344565 544 44 8999999999999887666543
No 174
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=57.76 E-value=9.9 Score=32.11 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=42.8
Q ss_pred HHHHHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 84 ADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 84 ~~a~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.+.++. .++||.+| ...|.| .++|.-|..+|++++++.+-..+..++ .+...+..++..|++|+.
T Consensus 95 ~~~L~~-i~~lvi~G-~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~ 160 (199)
T 2b34_A 95 EDTLKK-VQNVILVG-IEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHT--DRHFAFKQMEQAGAILTT 160 (199)
T ss_dssp HHHHTT-CSEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred HHHHcC-CCEEEEEE-EecCHHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHCCCEEec
Confidence 334445 88899886 445555 578888899999999988765432110 122346667778988763
No 175
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=57.62 E-value=62 Score=28.80 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=23.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|.++|......|.+++++.+.
T Consensus 10 ~vlVT-Ga-s~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 10 TAFVT-GG-ANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp EEEEE-TT-TSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEc-CC-chHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555 54 4778999999999999987776654
No 176
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=57.50 E-value=94 Score=26.84 Aligned_cols=159 Identities=11% Similarity=0.066 Sum_probs=75.6
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCc-----ccCCCCCccchH---HHHHHC-CC-E
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LVDQDPGLIGNL---LVERLV-GA-H 149 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~-----~~~~~~~~~~n~---~~~~~~-GA-e 149 (311)
...+..+..++++.||..+. ..+........++..|++++++-..... .+..+....+.. .+.+.+ |. +
T Consensus 47 ~~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~~~G~~~ 125 (313)
T 2h3h_A 47 LQMLESFIAEGVNGIAIAPS-DPTAVIPTIKKALEMGIPVVTLDTDSPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKGK 125 (313)
T ss_dssp HHHHHHHHHTTCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHHTSCSE
T ss_pred HHHHHHHHHcCCCEEEEeCC-ChHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEECcCHHHHHHHHHHHHHHHcCCCCE
Confidence 34466667788998886543 2222223344556789998776432211 000000001111 122221 43 4
Q ss_pred EEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcch
Q 021545 150 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 228 (311)
Q Consensus 150 V~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 228 (311)
|..+... ... ....+.+...+.+++.+ .-+......+.....++ ....+++++- ..+|.||+.. ..
T Consensus 126 I~~i~~~~~~~--~~~~R~~gf~~~l~~~g--~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~~--d~ 192 (313)
T 2h3h_A 126 VVIGTGSLTAM--NSLQRIQGFKDAIKDSE--IEIVDILNDEEDGARAV-SLAEAALNAH------PDLDAFFGVY--AY 192 (313)
T ss_dssp EEEEESCSSCH--HHHHHHHHHHHHHTTSS--CEEEEEEECSSCHHHHH-HHHHHHHHHC------TTCCEEEECS--TT
T ss_pred EEEEECCCCCc--cHHHHHHHHHHHhcCCC--CEEEEeecCCCCHHHHH-HHHHHHHHHC------cCceEEEEcC--CC
Confidence 6555432 111 01122233344444423 21111111111112333 3445555432 3589999754 45
Q ss_pred hHHHHHHHHhhCCC--CCeEEEEecc
Q 021545 229 TIAGLSLGSWLGTL--KAKVHAFSVC 252 (311)
Q Consensus 229 t~aGl~~~~~~~~~--~~rVigV~~~ 252 (311)
.+.|+..++++.+. ++.|+|++-.
T Consensus 193 ~a~g~~~al~~~G~p~dv~vvg~d~~ 218 (313)
T 2h3h_A 193 NGPAQALVVKNAGKVGKVKIVCFDTT 218 (313)
T ss_dssp HHHHHHHHHHHTTCTTTSEEEEECCC
T ss_pred ccHHHHHHHHHcCCCCCeEEEEeCCC
Confidence 67899999998763 6889988753
No 177
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=57.38 E-value=91 Score=26.63 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=21.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
.||| |+ +|--|+++|....+.|.+++++.
T Consensus 28 vlIT-Ga-s~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 28 AFVT-GG-MGGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp EEET-TT-TSHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 3454 54 47889999998888898876665
No 178
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=57.36 E-value=1.2e+02 Score=27.86 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=23.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
+|...|. |+.|.++|......|++++++-
T Consensus 24 kIgiIGl--G~mG~~~A~~L~~~G~~V~v~d 52 (358)
T 4e21_A 24 QIGMIGL--GRMGADMVRRLRKGGHECVVYD 52 (358)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECc--hHHHHHHHHHHHhCCCEEEEEe
Confidence 4444563 8999999999999999887774
No 179
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=57.34 E-value=41 Score=28.76 Aligned_cols=78 Identities=12% Similarity=-0.075 Sum_probs=51.1
Q ss_pred hhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC-CcccCCCCCccchHHHHHHCCCEEEE
Q 021545 74 NKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 74 nK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~-~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
|-...++..++.|.+.|++.||.. +++|-.+..++-.. .| +.++|.... .....++.-..++.+.++..|.+|+.
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVA-SssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t 110 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVA-SVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALLERGVNVYA 110 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEE-eCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEE
Confidence 778888888999999999998875 57788776555422 45 666665221 11100011125678889999999987
Q ss_pred EcC
Q 021545 153 ISK 155 (311)
Q Consensus 153 v~~ 155 (311)
-.-
T Consensus 111 ~tH 113 (206)
T 1t57_A 111 GSH 113 (206)
T ss_dssp CSC
T ss_pred eec
Confidence 554
No 180
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=57.20 E-value=17 Score=32.69 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=35.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|+ |.-|.+++..|+.+|.+.+++.+. ..++..++.+|++.+.-
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~i~ 216 (340)
T 3s2e_A 168 QWVVISGI--GGLGHVAVQYARAMGLRVAAVDID-----------DAKLNLARRLGAEVAVN 216 (340)
T ss_dssp SEEEEECC--STTHHHHHHHHHHTTCEEEEEESC-----------HHHHHHHHHTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEeCC-----------HHHHHHHHHcCCCEEEe
Confidence 45555553 678999999999999976555432 23678889999986653
No 181
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=57.19 E-value=78 Score=26.57 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=22.5
Q ss_pred EEEEeCCccchHHHHHHHHHHH-cCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~-~Gl~~~ivv~~ 125 (311)
+++..|+ +|--|.++|..-.+ .|.+++++.+.
T Consensus 6 ~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 6 VALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred EEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3443454 47889999988888 89887776653
No 182
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=57.17 E-value=66 Score=27.80 Aligned_cols=29 Identities=17% Similarity=0.160 Sum_probs=20.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
..||| |+ +|--|+++|..-.+.|.+++++
T Consensus 28 ~~lVT-Ga-s~gIG~aia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 28 TALVT-GS-SRGLGRAMAEGLAVAGARILIN 56 (271)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEE
Confidence 34554 54 4678889888888888875554
No 183
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=57.12 E-value=9.5 Score=32.15 Aligned_cols=62 Identities=15% Similarity=0.035 Sum_probs=39.3
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..+...+ .+...+..++..|++|+
T Consensus 122 ~~~gi~~lvi~G-~~t~~CV~~Ta~~a~~~G~~v~v~~Da~~~~~~~--~~~~al~~~~~~~~~v~ 184 (199)
T 3txy_A 122 RRRGITDIVLTG-IATNIGVESTAREAYENNYNVVVVSDAVSTWSTD--AQTFALTQIFPKLGQVA 184 (199)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEEBSCHH--HHHHHHHHTHHHHSEEE
T ss_pred HhCCCCEEEEEe-eccCHHHHHHHHHHHHCCCEEEEecHhhcCCCHH--HHHHHHHHHHhhceEEe
Confidence 457899999886 445655 578888899999999987654432110 01223444555566664
No 184
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=57.00 E-value=14 Score=33.43 Aligned_cols=50 Identities=20% Similarity=0.167 Sum_probs=35.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|| +|.-|++++..|+.+|.+.+++.+. ..++..++.+|++.+..
T Consensus 152 ~~VlV~gg-~G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi~ 201 (346)
T 3fbg_A 152 KTLLIING-AGGVGSIATQIAKAYGLRVITTASR-----------NETIEWTKKMGADIVLN 201 (346)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEECCS-----------HHHHHHHHHHTCSEEEC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCcEEEE
Confidence 45554554 4789999999999999965555332 23678888899986553
No 185
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=56.97 E-value=82 Score=27.60 Aligned_cols=30 Identities=30% Similarity=0.236 Sum_probs=22.0
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 29 vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 29 VIIT-GS-SNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999888888988776654
No 186
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=56.86 E-value=94 Score=26.62 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=28.9
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~g 253 (311)
..||.||+ .+..++.|+..++++.+. ++.|+|++-..
T Consensus 186 ~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vig~D~~~ 226 (294)
T 3qk7_A 186 VPPTAIIT--DCNMLGDGVASALDKAGLLGGEGISLIAYDGLP 226 (294)
T ss_dssp SCCSEEEE--SSHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred CCCcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence 46899987 466778899999998773 67899987543
No 187
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=56.78 E-value=97 Score=26.75 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 29 vlIT-Ga-sggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 29 AFIT-GG-GTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555 54 4789999999999999887766543
No 188
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=56.76 E-value=26 Score=29.27 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=39.8
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhH
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 266 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~ 266 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++- ...||||.+.............++
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aahLpgvvA~~t----~~PVIgVPv~~~~l~G~dsLlSiv 113 (173)
T 4grd_A 57 FDYAEKARE----RGLRAIIAGAGGAAHLPGMLAAKT----TVPVLGVPVASKYLKGVDSLHSIV 113 (173)
T ss_dssp HHHHHHHTT----TTCSEEEEEEESSCCHHHHHHHHC----CSCEEEEEECCTTTTTHHHHHHHH
T ss_pred HHHHHHHHh----cCCeEEEEeccccccchhhheecC----CCCEEEEEcCCCCCCchhHHHHHH
Confidence 345555432 348899999999999999999974 568999998766544444333333
No 189
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=56.64 E-value=18 Score=32.39 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=35.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ .|.-|++++..|+.+|.+.+.+.+. .+..+++.+||+.+.
T Consensus 154 ~~vlV~Ga-~G~vG~~a~q~a~~~Ga~vi~~~~~------------~~~~~~~~lGa~~~i 201 (321)
T 3tqh_A 154 DVVLIHAG-AGGVGHLAIQLAKQKGTTVITTASK------------RNHAFLKALGAEQCI 201 (321)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEECH------------HHHHHHHHHTCSEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHcCCEEEEEecc------------chHHHHHHcCCCEEE
Confidence 56665654 4789999999999999986655421 247778889998544
No 190
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=56.35 E-value=1.1e+02 Score=27.12 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=26.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
-+|| |+ +|.-|.+++......|.+.+++.+..
T Consensus 13 IlVt-Ga-tG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 13 VLIA-GA-TGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp EEEE-CT-TSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3454 54 58999999999999999999998765
No 191
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=56.12 E-value=7.1 Score=39.37 Aligned_cols=37 Identities=14% Similarity=0.112 Sum_probs=28.0
Q ss_pred eEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 219 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 219 ~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
+++|++|+|-+..-.+.+.+..+.++||+|||....+
T Consensus 361 VldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A 397 (637)
T 4gqb_A 361 LMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA 397 (637)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH
T ss_pred EEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH
Confidence 4567888887766667777777788899999986543
No 192
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=56.09 E-value=1e+02 Score=26.93 Aligned_cols=156 Identities=14% Similarity=0.092 Sum_probs=74.7
Q ss_pred HHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc----cCCCCCccch--HHHHHHCCCE-EEEEc
Q 021545 82 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGAH-IELIS 154 (311)
Q Consensus 82 ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~----~~~~~~~~~n--~~~~~~~GAe-V~~v~ 154 (311)
.+....+++++.||..+.. .+ ...+...++..|++++++-...... +..+....+. ...+...|.. +.++.
T Consensus 111 ~~~~l~~~~vdgiIi~~~~-~~-~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 188 (338)
T 3dbi_A 111 AIQYLLDLRCDAIMIYPRF-LS-VDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLT 188 (338)
T ss_dssp HHHHHHHTTCSEEEECCSS-SC-HHHHHHHHHHCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHhCCCCEEEEeCCC-CC-hHHHHHHHHcCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4556667778887765422 22 2345566677788876654322110 0000000011 1122234543 54443
Q ss_pred CccccccCcHHHHHHHHHHHHHcCCC---cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHH
Q 021545 155 KEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 231 (311)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~g~~---~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 231 (311)
...... ...++.+...+.+++.+.. .++.. +..+. ..|| ..+.+++++ ..+||.||+ .+...+.
T Consensus 189 ~~~~~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~-~~~~~--~~~~-~~~~~ll~~------~~~~~ai~~--~nd~~A~ 255 (338)
T 3dbi_A 189 GSMDSP-TSIERLAGYKDALAQHGIALNEKLIAN-GKWTP--ASGA-EGVEMLLER------GAKFSALVA--SNDDMAI 255 (338)
T ss_dssp CCTTCH-HHHHHHHHHHHHHHHTTCCCCGGGEEC-CCSSH--HHHH-HHHHHHHHT------TCCCSEEEE--SSHHHHH
T ss_pred CCCCCc-cHHHHHHHHHHHHHHCCCCCCcceEEe-CCCCH--HHHH-HHHHHHHcC------CCCCeEEEE--CChHHHH
Confidence 211000 1112223344445544321 11222 21222 2333 234455443 246999997 4567788
Q ss_pred HHHHHHhhCCC----CCeEEEEecc
Q 021545 232 GLSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 232 Gl~~~~~~~~~----~~rVigV~~~ 252 (311)
|+..++++.+. ++.|+|++-.
T Consensus 256 g~~~al~~~G~~vP~di~vvg~D~~ 280 (338)
T 3dbi_A 256 GAMKALHERGVAVPEQVSVIGFDDI 280 (338)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred HHHHHHHHcCCCCCCCeEEEEECCh
Confidence 99999998773 6789999843
No 193
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=56.01 E-value=61 Score=30.39 Aligned_cols=92 Identities=12% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCc--EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC--eEE
Q 021545 146 VGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD--DIV 221 (311)
Q Consensus 146 ~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~--y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D--~iv 221 (311)
.|-++.+|.+.... ....+++.+.|++.+-.. +.+|.+-.|+.- ....++.+++.+ ..+| .++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~-----~~v~~~~~~l~~----~~~~R~d~I 127 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTL-----ETFNTVMSFLLE----HNYSRDVVV 127 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBH-----HHHHHHHHHHHH----TTCCTTCEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchH-----HHHHHHHHHHHh----cCCCcCcEE
Confidence 34566555433211 123455666676655332 346666444431 234455555543 2343 688
Q ss_pred EeCCcchh--HHHHHHHHhhCCCCCeEEEEecc
Q 021545 222 VACGSGGT--IAGLSLGSWLGTLKAKVHAFSVC 252 (311)
Q Consensus 222 v~vGtGGt--~aGl~~~~~~~~~~~rVigV~~~ 252 (311)
+++|+|.. ++|.+.+.+. ..+++|.|...
T Consensus 128 IAvGGGsv~D~ak~~Aa~~~--rgip~I~IPTT 158 (390)
T 3okf_A 128 IALGGGVIGDLVGFAAACYQ--RGVDFIQIPTT 158 (390)
T ss_dssp EEEESHHHHHHHHHHHHHBT--TCCEEEEEECS
T ss_pred EEECCcHHhhHHHHHHHHhc--CCCCEEEeCCC
Confidence 89998876 3666554443 45778887764
No 194
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=55.84 E-value=23 Score=31.60 Aligned_cols=48 Identities=13% Similarity=0.017 Sum_probs=34.8
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
+|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.
T Consensus 152 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~-----------~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 152 PVLVTGA-TGGVGSLAVSMLAKRGYTVEASTGKA-----------AEHDYLRVLGAKEVL 199 (328)
T ss_dssp CEEESST-TSHHHHHHHHHHHHTTCCEEEEESCT-----------TCHHHHHHTTCSEEE
T ss_pred eEEEecC-CCHHHHHHHHHHHHCCCEEEEEECCH-----------HHHHHHHHcCCcEEE
Confidence 4555554 47899999999999999866655432 246777889998554
No 195
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.80 E-value=15 Score=28.98 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=25.3
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.++|+.+|+ |..|..+|...+..|.+++++-+
T Consensus 19 ~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGC--GRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEECC--CHHHHHHHHHHHhCCCeEEEEEC
Confidence 356666674 99999999999999998777654
No 196
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.74 E-value=29 Score=31.33 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=34.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|.+ ++.+... ..++.+++.+|++.+.
T Consensus 170 ~~VlV~Ga--G~vG~~a~qla~~~Ga~-Vi~~~~~----------~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 170 TTVLVIGA--GPIGLVSVLAAKAYGAF-VVCTARS----------PRRLEVAKNCGADVTL 217 (352)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEEESC----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCE-EEEEcCC----------HHHHHHHHHhCCCEEE
Confidence 45555663 78999999999999998 4444322 2367788899997543
No 197
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=55.72 E-value=94 Score=26.26 Aligned_cols=51 Identities=14% Similarity=-0.053 Sum_probs=31.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|.-|+++|....+.|.+++++.+... ......++..|.++..+.
T Consensus 7 vlVT-Ga-s~giG~~ia~~l~~~G~~V~~~~r~~~---------~~~~~~l~~~~~~~~~~~ 57 (255)
T 2q2v_A 7 ALVT-GS-TSGIGLGIAQVLARAGANIVLNGFGDP---------APALAEIARHGVKAVHHP 57 (255)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEECSSCC---------HHHHHHHHTTSCCEEEEC
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCCch---------HHHHHHHHhcCCceEEEe
Confidence 3454 54 478999999999999988766543321 112333444566666554
No 198
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=55.61 E-value=16 Score=34.67 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=38.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|+ +|--|.+.+.+|+.+|.+.+++.+. ..++..++.+||+.+.-
T Consensus 230 ~~VlV~Ga-sG~vG~~avqlak~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 230 DNVLIWGA-SGGLGSYATQFALAGGANPICVVSS-----------PQKAEICRAMGAEAIID 279 (456)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCeEEEEECC-----------HHHHHHHHhhCCcEEEe
Confidence 56665654 5789999999999999988777642 24688889999986543
No 199
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=55.25 E-value=96 Score=26.24 Aligned_cols=164 Identities=10% Similarity=-0.068 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc---cCCCCCccch--HHHHHH--CCCE-E
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL---VDQDPGLIGN--LLVERL--VGAH-I 150 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~---~~~~~~~~~n--~~~~~~--~GAe-V 150 (311)
....+..+.+++++.||..+ ............+...|++++++-...... +..+....+. ...+.. .|.. |
T Consensus 50 ~~~~~~~l~~~~vdgiIi~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~i 128 (291)
T 3l49_A 50 QVSQIQTLIAQKPDAIIEQL-GNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNV 128 (291)
T ss_dssp HHHHHHHHHHHCCSEEEEES-SCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCCEEEEeC-CChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCceE
Confidence 34457777788999988654 333445556667788899987764322110 0000000011 112222 5654 5
Q ss_pred EEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCC---CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 151 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG---GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g---~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
..+.... .......+.+...+.+++.+ ..-++... ..+.....++ ..+.++.++-++ ..++|.||+ .+.
T Consensus 129 ~~i~~~~-~~~~~~~R~~gf~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~---~~~~~ai~~--~~d 200 (291)
T 3l49_A 129 LVFNGFY-SVPVCKIRYDQMKYVLEAFP-DVKIIEPELRDVIPNTIQSAY-SNVTDMLTKYPN---EGDVGAIWA--CWD 200 (291)
T ss_dssp EEECSCT-TSHHHHHHHHHHHHHHHTCT-TEEECSSCBCCCSSSHHHHHH-HHHHHHHHHCCS---TTSCCEEEE--SSH
T ss_pred EEEeCCC-CCchHHHHHHHHHHHHHHCC-CCEEEeeeccCCCCCCHHHHH-HHHHHHHHhCCC---cCCcCEEEE--CCC
Confidence 5554321 10011123334444454432 21122211 1111222333 344555554210 016899986 466
Q ss_pred hhHHHHHHHHhhCCC-CCeEEEEec
Q 021545 228 GTIAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 228 Gt~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
..+.|+..++++.+. ++.|+|++-
T Consensus 201 ~~a~g~~~al~~~g~~di~vvg~d~ 225 (291)
T 3l49_A 201 VPMIGATQALQAAGRTDIRTYGVDG 225 (291)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEEEC
T ss_pred chHHHHHHHHHHcCCCCeEEEEecC
Confidence 788999999999876 788888864
No 200
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=55.17 E-value=22 Score=31.41 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=34.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.
T Consensus 127 ~~vlV~Ga-~G~vG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 175 (302)
T 1iz0_A 127 EKVLVQAA-AGALGTAAVQVARAMGLRVLAAASRP-----------EKLALPLALGAEEAA 175 (302)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESSG-----------GGSHHHHHTTCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 45555554 57899999999999999766655422 245566789987543
No 201
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=55.00 E-value=71 Score=27.60 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=45.0
Q ss_pred HHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021545 141 LVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 220 (311)
Q Consensus 141 ~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~i 220 (311)
+.+...|++|+.+.+.. +..+++.+++.+.+.+..++..+-+++.. ...+..++.++. +.+|.+
T Consensus 22 ~~la~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~------g~iD~l 85 (264)
T 3tfo_A 22 RELGVAGAKILLGARRQ-------ARIEAIATEIRDAGGTALAQVLDVTDRHS---VAAFAQAAVDTW------GRIDVL 85 (264)
T ss_dssp HHHHHTTCEEEEEESSH-------HHHHHHHHHHHHTTCEEEEEECCTTCHHH---HHHHHHHHHHHH------SCCCEE
T ss_pred HHHHHCCCEEEEEECCH-------HHHHHHHHHHHhcCCcEEEEEcCCCCHHH---HHHHHHHHHHHc------CCCCEE
Confidence 34455799999887642 12345556666655555566655555543 334666777766 369999
Q ss_pred EEeCCcc
Q 021545 221 VVACGSG 227 (311)
Q Consensus 221 vv~vGtG 227 (311)
|...|..
T Consensus 86 VnnAG~~ 92 (264)
T 3tfo_A 86 VNNAGVM 92 (264)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9998864
No 202
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=54.97 E-value=96 Score=26.16 Aligned_cols=156 Identities=9% Similarity=-0.071 Sum_probs=74.2
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc----cCCCCCccch--HHHHHHCCCE-EEE
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGAH-IEL 152 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~----~~~~~~~~~n--~~~~~~~GAe-V~~ 152 (311)
..++....+++++.||..+... ......+...|++++++-...... +..+....+. ...+...|.+ +..
T Consensus 53 ~~~~~~l~~~~vdgiIi~~~~~----~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~ 128 (276)
T 3jy6_A 53 KTLLRAIGSRGFDGLILQSFSN----PQTVQEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGYQHVVV 128 (276)
T ss_dssp HHHHHHHHTTTCSEEEEESSCC----HHHHHHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHhCCCCEEEEecCCc----HHHHHHHHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHcCCCeEEE
Confidence 3456666778889888764322 444555667899988774332110 0000000011 1123334554 444
Q ss_pred EcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHH
Q 021545 153 ISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAG 232 (311)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aG 232 (311)
+............+.+...+.+++.+ . +++....... ..++..+. +++++ ...+|.||+ .+..++.|
T Consensus 129 i~~~~~~~~~~~~R~~gf~~~l~~~~-~-~~~~~~~~~~--~~~~~~~~-~~l~~------~~~~~ai~~--~~d~~a~g 195 (276)
T 3jy6_A 129 LTSELELSRTRQERYRGILAAAQDVD-V-LEVSESSYNH--SEVHQRLT-QLITQ------NDQKTVAFA--LKERWLLE 195 (276)
T ss_dssp EEECSTTCHHHHHHHHHHHTTCSEEE-E-EEECSSSCCH--HHHHHHHH-HHHHS------SSSCEEEEE--SSHHHHHH
T ss_pred EecCCCCCchHHHHHHHHHHHHHhCC-c-EEEeccccCC--cHHHHHHH-HHHhc------CCCCcEEEE--eCcHHHHH
Confidence 43211100001112222222222222 1 3443221111 12443332 33221 246899987 56678889
Q ss_pred HHHHHhhCCC----CCeEEEEecc
Q 021545 233 LSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 233 l~~~~~~~~~----~~rVigV~~~ 252 (311)
+..++++.+. ++.|+|++-.
T Consensus 196 ~~~al~~~g~~vP~di~vig~d~~ 219 (276)
T 3jy6_A 196 FFPNLIISGLIDNQTVTATGFADT 219 (276)
T ss_dssp HSHHHHHSSSCCSSSEEEEEBCCC
T ss_pred HHHHHHHcCCCCCCcEEEEEECCh
Confidence 9999998874 5668887654
No 203
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=54.91 E-value=97 Score=26.26 Aligned_cols=31 Identities=26% Similarity=0.168 Sum_probs=22.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|.++|....+.|.+++++-+
T Consensus 9 ~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 9 LAIIT-GA-SQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEEC
Confidence 34555 54 467888998888888887766654
No 204
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=54.83 E-value=98 Score=26.22 Aligned_cols=30 Identities=23% Similarity=0.078 Sum_probs=21.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|--|+++|....+.|.+++++.+
T Consensus 7 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 7 AVVT-GS-TSGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEe-CC-CcHHHHHHHHHHHHcCCEEEEEeC
Confidence 3454 54 467899999998889988666543
No 205
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=54.77 E-value=1.1e+02 Score=26.82 Aligned_cols=147 Identities=14% Similarity=0.108 Sum_probs=77.3
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC-------C--c--cchHHHHHHCCCE-
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-------G--L--IGNLLVERLVGAH- 149 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~-------~--~--~~n~~~~~~~GAe- 149 (311)
+.+.++ ++++.|| |...+....+++-.+...+++++.+...........+ . . ..-...+..+|.+
T Consensus 64 ~~~li~~~~v~~ii--G~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 141 (368)
T 4eyg_A 64 AQELIVNDKVNVIA--GFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNGIKK 141 (368)
T ss_dssp HHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCcEEEE--CCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcCCCE
Confidence 444554 7788777 4455677888899999999998765422110000001 0 0 0112334446754
Q ss_pred EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021545 150 IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 225 (311)
Q Consensus 150 V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 225 (311)
|..+. +..|. ....+...+.+++.+... ..++.+..+ +.....+|.+ ..+|.||+.+.
T Consensus 142 ia~i~~~~~~g----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~~~~ 203 (368)
T 4eyg_A 142 VATLTSDYAPG----NDALAFFKERFTAGGGEIVEEIKVPLANPD------FAPFLQRMKD--------AKPDAMFVFVP 203 (368)
T ss_dssp EEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECSSSCC------CHHHHHHHHH--------HCCSEEEEECC
T ss_pred EEEEecCchHh----HHHHHHHHHHHHHcCCEEEEEEeCCCCCCc------HHHHHHHHHh--------cCCCEEEEecc
Confidence 44443 22221 122344455566554321 123333222 1223334433 24899888543
Q ss_pred cchhHHHHHHHHhhCCCC---CeEEEEe
Q 021545 226 SGGTIAGLSLGSWLGTLK---AKVHAFS 250 (311)
Q Consensus 226 tGGt~aGl~~~~~~~~~~---~rVigV~ 250 (311)
+..+.++...++..+.. +.+++..
T Consensus 204 -~~~a~~~~~~~~~~g~~~~~v~~~~~~ 230 (368)
T 4eyg_A 204 -AGQGGNFMKQFAERGLDKSGIKVIGPG 230 (368)
T ss_dssp -TTCHHHHHHHHHHTTGGGTTCEEEEET
T ss_pred -chHHHHHHHHHHHcCCCcCCceEEecC
Confidence 34888999999987765 6677765
No 206
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=54.70 E-value=1.1e+02 Score=26.85 Aligned_cols=158 Identities=15% Similarity=0.064 Sum_probs=77.6
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc----cCCCCCccch--HHHHHHCCCE-EEE
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGAH-IEL 152 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~----~~~~~~~~~n--~~~~~~~GAe-V~~ 152 (311)
..++...++++++.||..+.. .+. .....+...|++++++-+..... +..+....+. ...+...|.+ +.+
T Consensus 114 ~~~i~~l~~~~vdGiIi~~~~-~~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~ 190 (344)
T 3kjx_A 114 EKVLYEMLSWRPSGVIIAGLE-HSE--AARAMLDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGF 190 (344)
T ss_dssp HHHHHHHHTTCCSEEEEECSC-CCH--HHHHHHHHCSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCCSCCE
T ss_pred HHHHHHHHhCCCCEEEEECCC-CCH--HHHHHHHhCCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEE
Confidence 345666677888988876432 222 34445667899998884322111 0000000011 1122234654 433
Q ss_pred EcCccccccCcHHHHHHHHHHHHHcCCC--cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhH
Q 021545 153 ISKEEYSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 230 (311)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~~l~~~g~~--~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~ 230 (311)
+...........++.+...+.+++.+.. ...+..+..+. ..|| ..+.+++++- .+||.||+ .+...+
T Consensus 191 i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~--~nd~~A 259 (344)
T 3kjx_A 191 MGTKMPLDYRARKRFEGFTEVLGKNGVEIEDREFYSGGSAL--AKGR-EMTQAMLERS------PDLDFLYY--SNDMIA 259 (344)
T ss_dssp EESSTTTCHHHHHHHHHHHHHHHHTTCCCSCEEECSSCCCH--HHHH-HHHHHHHHHS------TTCCEEEE--SSHHHH
T ss_pred EecCcccCccHHHHHHHHHHHHHHcCCCCChheEEeCCCCH--HHHH-HHHHHHHhcC------CCCCEEEE--CCHHHH
Confidence 3321100001122334444555554422 12222222222 2344 3445555542 36899996 456788
Q ss_pred HHHHHHHhhCCC----CCeEEEEec
Q 021545 231 AGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 231 aGl~~~~~~~~~----~~rVigV~~ 251 (311)
.|+..++++.+. ++.|+|++-
T Consensus 260 ~g~~~al~~~g~~vP~disvvg~D~ 284 (344)
T 3kjx_A 260 AGGLLYLLEQGIDIPGQIGLAGFNN 284 (344)
T ss_dssp HHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred HHHHHHHHHcCCCCCCceEEEEECC
Confidence 999999998774 567887763
No 207
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=54.52 E-value=98 Score=26.14 Aligned_cols=161 Identities=17% Similarity=0.075 Sum_probs=77.0
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch---HHHHHHCC--C
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLVG--A 148 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n---~~~~~~~G--A 148 (311)
....+..+.+++++.||..+.. .+........+...|++++++-...... +..+....+. ..+.+.+| -
T Consensus 54 ~~~~~~~l~~~~vdgii~~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~L~~~~G~~~ 132 (289)
T 3brs_A 54 QNELIEEAIKRKPDVILLAAAD-YEKTYDAAKEIKDAGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVRKSG 132 (289)
T ss_dssp HHHHHHHHHHTCCSEEEECCSC-TTTTHHHHTTTGGGTCEEEEESSCCSSCCCSEEEECCHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHhCCCEEEEeCCC-hHHhHHHHHHHHHCCCcEEEECCCCCCCcceEEEeeChHHHHHHHHHHHHHHcCCCc
Confidence 3345666677889988865432 2221222333455788877664321110 0000000011 11233346 3
Q ss_pred EEEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 149 HIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 149 eV~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
+|..+... ... ....+.+...+.+++.+. .+ .+....+.....++ ..+.++.++- ..+|.||+. +.
T Consensus 133 ~i~~i~~~~~~~--~~~~R~~gf~~~l~~~g~-~~-~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d 199 (289)
T 3brs_A 133 KIGVISFVKNSK--TAMDREEGLKIGLSDDSN-KI-EAIYYCDSNYDKAY-DGTVELLTKY------PDISVMVGL--NQ 199 (289)
T ss_dssp EEEEEESCTTSH--HHHHHHHHHHHHHGGGGG-GE-EEEEECTTCHHHHH-HHHHHHHHHC------TTEEEEEES--SH
T ss_pred eEEEEECCCCCc--cHHHHHHHHHHHHHhCCC-cE-EeeecCCCCHHHHH-HHHHHHHHhC------CCceEEEEC--CC
Confidence 56666432 111 111223334444544332 21 11100111112233 2444554432 358888864 56
Q ss_pred hhHHHHHHHHhhCCC--CCeEEEEeccC
Q 021545 228 GTIAGLSLGSWLGTL--KAKVHAFSVCD 253 (311)
Q Consensus 228 Gt~aGl~~~~~~~~~--~~rVigV~~~g 253 (311)
..+.|+..++++.+. ++.|+|++-..
T Consensus 200 ~~a~g~~~al~~~G~~~di~vvg~d~~~ 227 (289)
T 3brs_A 200 YSATGAARAIKDMSLEAKVKLVCIDSSM 227 (289)
T ss_dssp HHHHHHHHHHHHTTCTTTSEEEEEESCS
T ss_pred cchHHHHHHHHhcCCCCCEEEEEECCCH
Confidence 678899999988775 58899987654
No 208
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=54.41 E-value=97 Score=26.04 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=32.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|--|+++|....+.|.++++........ .......++..|.++..+.
T Consensus 16 vlIT-Ga-s~giG~~ia~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 69 (256)
T 3ezl_A 16 AYVT-GG-MGGIGTSICQRLHKDGFRVVAGCGPNSPR------RVKWLEDQKALGFDFYASE 69 (256)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTEEEEEEECTTCSS------HHHHHHHHHHTTCCCEEEE
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCCHHH------HHHHHHHHHhcCCeeEEEe
Confidence 3444 54 47889999999999998877766333211 1122444555666665554
No 209
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=54.40 E-value=94 Score=25.90 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=21.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 16 ~vlIT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 16 VILVT-GA-ARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CChHHHHHHHHHHHCCCEEEEEec
Confidence 34554 54 478888988888888887666543
No 210
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=54.12 E-value=24 Score=32.17 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=34.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |--|.+++..|+.+ |.+.+++.+. ..++.+++.+||+.+.
T Consensus 188 ~~VlV~Ga--G~vG~~avqlak~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi 236 (359)
T 1h2b_A 188 AYVAIVGV--GGLGHIAVQLLKVMTPATVIALDVK-----------EEKLKLAERLGADHVV 236 (359)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESS-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEeCC-----------HHHHHHHHHhCCCEEE
Confidence 56665665 67999999999999 9975444322 1367788899997554
No 211
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=53.67 E-value=1.1e+02 Score=26.43 Aligned_cols=52 Identities=17% Similarity=0.062 Sum_probs=33.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+... .-....+.+|.++..+.-
T Consensus 7 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 58 (281)
T 3zv4_A 7 VALIT-GG-ASGLGRALVDRFVAEGARVAVLDKSAE----------RLRELEVAHGGNAVGVVG 58 (281)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEESCHH----------HHHHHHHHTBTTEEEEEC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCcCEEEEEeCCHH----------HHHHHHHHcCCcEEEEEc
Confidence 34555 54 478999999999999998877754321 012234456777766543
No 212
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=53.48 E-value=1e+02 Score=28.38 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchh--HHHHHHHHh-------
Q 021545 168 NILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT--IAGLSLGSW------- 238 (311)
Q Consensus 168 ~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt--~aGl~~~~~------- 238 (311)
+++.+.|.+.+-...+++....||.- ....++.+++.+ ..+| +|+++|+|.. +++.+....
T Consensus 53 ~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~IIavGGGsv~D~aK~iA~~~~~~~~~~ 122 (387)
T 3bfj_A 53 DKTLHYLREAGIEVAIFDGVEPNPKD-----TNVRDGLAVFRR----EQCD-IIVTVGGGSPHDCGKGIGIAATHEGDLY 122 (387)
T ss_dssp HHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCC-EEEEEESHHHHHHHHHHHHHHHSSSCSG
T ss_pred HHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCCC-EEEEeCCcchhhHHHHHHHHHhCCCCHH
Confidence 45556666655333345544445532 233455555543 2465 5678888765 444444431
Q ss_pred --h-----CCCCCeEEEEeccC
Q 021545 239 --L-----GTLKAKVHAFSVCD 253 (311)
Q Consensus 239 --~-----~~~~~rVigV~~~g 253 (311)
. ..+..++|.|..--
T Consensus 123 d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 123 QYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp GGCBSSCCCSCCCCEEEEECST
T ss_pred HHhcccccCCCCCCEEEEeCCC
Confidence 1 01466788887654
No 213
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=53.45 E-value=17 Score=34.16 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=37.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+. ..++..++.+|++.+.
T Consensus 222 ~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 222 DIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSS-----------AQKEAAVRALGCDLVI 270 (447)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCCCEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCCEEE
Confidence 55665654 5789999999999999987777642 2367788999998654
No 214
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=53.43 E-value=90 Score=26.38 Aligned_cols=34 Identities=3% Similarity=-0.007 Sum_probs=23.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
++++..|+ +|--|+++|..-.+.|.+++++.+..
T Consensus 8 k~vlVTGa-s~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 8 RHALITAG-TKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCC-CchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 33443454 46788999988888999887775543
No 215
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=53.39 E-value=49 Score=29.88 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=34.3
Q ss_pred CEEEEeCCccchHHHHH-HHHH-HHcCCc-EEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAA-AVAA-KYLNLD-CYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~Al-A~~a-~~~Gl~-~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..|+ |--|.++ +..| +.+|.+ .+.+.+.... ..++.+++.+||+.+
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~--------~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRP--------DPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSS--------CHHHHHHHHTTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCccc--------HHHHHHHHHcCCccc
Confidence 55655664 7799999 9999 999998 5555432210 015778889999866
No 216
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=53.35 E-value=17 Score=32.48 Aligned_cols=50 Identities=14% Similarity=0.034 Sum_probs=36.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.-
T Consensus 142 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 142 EIILFHAA-AGGVGSLACQWAKALGAKLIGTVSSP-----------EKAAHAKALGAWETID 191 (325)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEEe
Confidence 45655553 47899999999999999766665321 3577788899976543
No 217
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=53.27 E-value=19 Score=32.72 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=36.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|| +|.-|++++..|+..|.+.+++.+.. .++..++.+|++.+..
T Consensus 169 ~~VlV~Gg-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 169 ESVLIHGG-TSGIGTTAIQLARAFGAEVYATAGST-----------GKCEACERLGAKRGIN 218 (353)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCCEEEe
Confidence 45655554 47899999999999999866554321 3577788899986543
No 218
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=53.01 E-value=23 Score=31.60 Aligned_cols=48 Identities=10% Similarity=0.019 Sum_probs=34.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
+|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.
T Consensus 153 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~-----------~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 153 SVLVTGA-TGGVGGIAVSMLNKRGYDVVASTGNR-----------EAADYLKQLGASEVI 200 (330)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHHTCCEEEEESSS-----------STHHHHHHHTCSEEE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEE
Confidence 4555554 47899999999999999866655432 246677889997543
No 219
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=52.97 E-value=1.1e+02 Score=26.31 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=23.6
Q ss_pred CEEEEeCCcc-chHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~-GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+++ |--|+++|....+.|.+++++.+.
T Consensus 23 ~vlVT-Gas~~~gIG~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 23 RALIT-GVANERSIAYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp EEEEC-CCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEE-CCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 34554 6542 678999999888899887776543
No 220
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=52.94 E-value=30 Score=31.65 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=33.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|.+.+++.+.. .++..++.+||+.+.
T Consensus 196 ~~VlV~Ga--G~vG~~aiqlak~~Ga~Vi~~~~~~-----------~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 196 KKVGVVGI--GGLGHMGIKLAHAMGAHVVAFTTSE-----------AKREAAKALGADEVV 243 (369)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEe
Confidence 45555664 6799999999999999844444321 357778889997554
No 221
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=52.83 E-value=24 Score=31.70 Aligned_cols=50 Identities=16% Similarity=0.060 Sum_probs=36.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+.-
T Consensus 146 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 146 DVLLVNAC-GSAIGHLFAQLSQILNFRLIAVTRNN-----------KHTEELLRLGAAYVID 195 (340)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESSS-----------TTHHHHHHHTCSEEEE
T ss_pred CEEEEeCC-ccHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhCCCcEEEe
Confidence 45655554 46899999999999999866665432 2477788899986553
No 222
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.80 E-value=33 Score=26.22 Aligned_cols=29 Identities=10% Similarity=-0.043 Sum_probs=23.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
+++.+|+ |..|+++|......|++++++-
T Consensus 8 ~v~I~G~--G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 8 EYIVIGS--EAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp SEEEECC--SHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCeEEEEE
Confidence 4555665 8899999999999999887764
No 223
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=52.70 E-value=1.1e+02 Score=26.35 Aligned_cols=31 Identities=23% Similarity=0.043 Sum_probs=22.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++-+
T Consensus 27 ~~lVT-Ga-s~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 27 TAVIT-GS-TSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 467899999988889987666543
No 224
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=52.57 E-value=78 Score=27.48 Aligned_cols=48 Identities=10% Similarity=-0.079 Sum_probs=30.1
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
||| |++ +.-|+++|..-++.|.++++.-+ . ..+...+..-+.++..+.
T Consensus 6 lVT-Gas-~GIG~aia~~la~~Ga~V~~~~~--~---------~~~~~~~~~~~~~~~~~~ 53 (247)
T 3ged_A 6 IVT-GGG-HGIGKQICLDFLEAGDKVCFIDI--D---------EKRSADFAKERPNLFYFH 53 (247)
T ss_dssp EEE-STT-SHHHHHHHHHHHHTTCEEEEEES--C---------HHHHHHHHTTCTTEEEEE
T ss_pred EEe-cCC-CHHHHHHHHHHHHCCCEEEEEeC--C---------HHHHHHHHHhcCCEEEEE
Confidence 455 544 67899999999999988766532 1 123444455555655543
No 225
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=52.53 E-value=21 Score=32.63 Aligned_cols=49 Identities=14% Similarity=0.059 Sum_probs=36.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..| .|.-|.+++.+|+.+|.+.+++.+. ..++..++.+||+.+.-
T Consensus 191 ~~VlV~G--~G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 191 DRVVVQG--TGGVALFGLQIAKATGAEVIVTSSS-----------REKLDRAFALGADHGIN 239 (363)
T ss_dssp CEEEEES--SBHHHHHHHHHHHHTTCEEEEEESC-----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEC--CCHHHHHHHHHHHHcCCEEEEEecC-----------chhHHHHHHcCCCEEEc
Confidence 4566565 4789999999999999986665432 13677889999986553
No 226
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=52.50 E-value=1.2e+02 Score=26.36 Aligned_cols=153 Identities=14% Similarity=0.065 Sum_probs=79.3
Q ss_pred HHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC-------cc---cCCCCCccch--HHHH-HHCCCE
Q 021545 83 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK-------VL---VDQDPGLIGN--LLVE-RLVGAH 149 (311)
Q Consensus 83 l~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~-------~~---~~~~~~~~~n--~~~~-~~~GAe 149 (311)
+.+.++++++.|| |...+....+++-.+...+++++.+..... +. ...+....+. ...+ +.+|.+
T Consensus 62 ~~~l~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 139 (346)
T 1usg_A 62 ANKIVNDGIKYVI--GHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ 139 (346)
T ss_dssp HHHHHHTTCCEEE--CCSSHHHHHHHHHHHHHHTCEEEECCCCCGGGGSSCCSSEEECSCCGGGHHHHHHHHHHHTTCCS
T ss_pred HHHHHhCCCCEEE--cCCCcHHHHHHHHHHHHCCCeEEeeCCCChHHhcCCCCcEEeccCChHHHHHHHHHHHHHhcCCC
Confidence 4444567888887 333455667778888889998766532110 00 0000000111 1222 335754
Q ss_pred -EEEEc-CccccccCcHHHHHHHHHHHHHcCCCcE---EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 150 -IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRPY---VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 150 -V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~y---~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|..+. ...|. ....+...+.+++.+-... .++.+..+. .....+|.+ ..+|.||+..
T Consensus 140 ~i~~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~------~~~~~~l~~--------~~~d~i~~~~ 201 (346)
T 1usg_A 140 RIAIIHDKQQYG----EGLARSVQDGLKAANANVVFFDGITAGEKDF------SALIARLKK--------ENIDFVYYGG 201 (346)
T ss_dssp SEEEEECSSHHH----HHHHHHHHHHHHHTTCCEEEEEECCTTCCCC------HHHHHHHHH--------TTCCEEEEES
T ss_pred eEEEEECCCchH----HHHHHHHHHHHHHcCCEEEEEeccCCCCcCH------HHHHHHHHh--------cCCCEEEEcC
Confidence 54443 22221 1223444455555553321 222222111 123334432 2489888864
Q ss_pred CcchhHHHHHHHHhhCCCCCeEEEEeccCCch
Q 021545 225 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD 256 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~ 256 (311)
.+..+.++...+++.+.+.++++.+...++.
T Consensus 202 -~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ 232 (346)
T 1usg_A 202 -YYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 232 (346)
T ss_dssp -CHHHHHHHHHHHHHTTCCCEEEECGGGCCTT
T ss_pred -cchHHHHHHHHHHHcCCCCeEEecCCCCcHH
Confidence 5567889999999988888888876554443
No 227
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=52.48 E-value=1e+02 Score=25.63 Aligned_cols=29 Identities=21% Similarity=0.145 Sum_probs=22.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
.||| |+ +|.-|+++|....+.|.+.+++.
T Consensus 8 vlIt-Ga-sggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 8 AIVT-GS-SRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 3454 54 58899999999999999877763
No 228
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=52.41 E-value=1.1e+02 Score=25.99 Aligned_cols=55 Identities=13% Similarity=-0.005 Sum_probs=36.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|....+.|.+++++-+.... ...-...++..|.++..+.-
T Consensus 9 ~vlVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~ 63 (252)
T 3h7a_A 9 TVAVI-GA-GDYIGAEIAKKFAAEGFTVFAGRRNGEK-------LAPLVAEIEAAGGRIVARSL 63 (252)
T ss_dssp EEEEE-CC-SSHHHHHHHHHHHHTTCEEEEEESSGGG-------GHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEC
Confidence 34555 54 4678999999999999997777654321 11224455667888877654
No 229
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=52.30 E-value=1.1e+02 Score=26.06 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=22.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++.+
T Consensus 13 ~~lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVIT-GG-ARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34454 54 467899999888888887776654
No 230
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=52.25 E-value=32 Score=28.93 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=41.1
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++- ...||||.+..+..........+++
T Consensus 58 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivq 115 (183)
T 1o4v_A 58 FEYAKNAEE----RGIEVIIAGAGGAAHLPGMVASIT----HLPVIGVPVKTSTLNGLDSLFSIVQ 115 (183)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEecCcccccHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 455555542 347899999999999999999984 5689999998765444444444443
No 231
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=52.21 E-value=27 Score=31.69 Aligned_cols=53 Identities=19% Similarity=0.104 Sum_probs=37.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|--|++++.+|+.+|.+.+++++.... ...+..+++.+||+.+.
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~-------~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 169 DSVIQNAS-NSGVGQAVIQIAAALGLRTINVVRDRPD-------IQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEECCCSC-------HHHHHHHHHHTTCSEEE
T ss_pred CEEEEeCC-cCHHHHHHHHHHHHcCCEEEEEecCccc-------hHHHHHHHHhcCCcEEE
Confidence 56665654 4789999999999999998877754321 01245678889998654
No 232
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=52.21 E-value=1.3e+02 Score=26.69 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=75.0
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCC--CC-------Cc----cchHHHHHHCCC
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------GL----IGNLLVERLVGA 148 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~--~~-------~~----~~n~~~~~~~GA 148 (311)
+.++++ ++++.|| |...+....+++-.+.+.+++.+............ .| .. ..-...+..+|.
T Consensus 63 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 140 (375)
T 3i09_A 63 AREWMDRGGLDLLV--GGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGG 140 (375)
T ss_dssp HHHHHHHSCEEEEE--ECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCCCEEEE--CCCCcHHHHHHHHHHHHcCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCC
Confidence 444444 6766666 44567788889999999999887663221111000 00 00 011233444566
Q ss_pred E-EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021545 149 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 223 (311)
Q Consensus 149 e-V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~ 223 (311)
+ |..+. +..|. ....+...+.+++.|... ..++.+..+. .....+|.+ ..+|.||++
T Consensus 141 ~~vaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~i~~--------~~~d~v~~~ 202 (375)
T 3i09_A 141 KTWFFLTADYAFG----KALEKNTADVVKANGGKVLGEVRHPLSASDF------SSFLLQAQS--------SKAQILGLA 202 (375)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSCC------HHHHHHHHH--------TCCSEEEEE
T ss_pred ceEEEEecccHHH----HHHHHHHHHHHHHcCCEEeeeeeCCCCCccH------HHHHHHHHh--------CCCCEEEEe
Confidence 5 44442 22221 122344455555554332 1234332221 122233322 258998885
Q ss_pred CCcchhHHHHHHHHhhCCCCCe--EEEE
Q 021545 224 CGSGGTIAGLSLGSWLGTLKAK--VHAF 249 (311)
Q Consensus 224 vGtGGt~aGl~~~~~~~~~~~r--VigV 249 (311)
+.+..+.++...++..+.+.+ |+|.
T Consensus 203 -~~~~~~~~~~~~~~~~g~~~~~~i~g~ 229 (375)
T 3i09_A 203 -NAGGDTVNAIKAAKEFGITKTMKLAAL 229 (375)
T ss_dssp -CCHHHHHHHHHHHHHTTGGGTCEEEES
T ss_pred -cCchhHHHHHHHHHHcCCCcCceEEec
Confidence 456677888998888876654 5553
No 233
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=52.08 E-value=92 Score=26.88 Aligned_cols=29 Identities=17% Similarity=0.059 Sum_probs=21.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
.||| |+ +|.-|+++|....+.|.+++++.
T Consensus 47 vlIT-Ga-sggIG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 47 ALVT-GA-GRGIGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp EEEE-ST-TSHHHHHHHHHHTTTSSEEEEEE
T ss_pred EEEE-CC-CcHHHHHHHHHHHHcCCEEEEEc
Confidence 3454 54 47899999988888898877744
No 234
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=51.60 E-value=1.3e+02 Score=26.75 Aligned_cols=152 Identities=12% Similarity=0.071 Sum_probs=78.5
Q ss_pred HHHHHHHHc-CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccC--CCC-------C--ccch--HHHHH-H
Q 021545 81 FLMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD--QDP-------G--LIGN--LLVER-L 145 (311)
Q Consensus 81 ~ll~~a~~~-G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~--~~~-------~--~~~n--~~~~~-~ 145 (311)
..+.+.+++ +++.||. ..+....+++-.+...+++.+..... .+... ..+ . ..+. ...+. .
T Consensus 65 ~~~~~li~~~~V~~iig---~~s~~~~~~~~~~~~~~iP~i~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~ 140 (392)
T 3lkb_A 65 RFFEEAVDRFKIPVFLS---YATGANLQLKPLIQELRIPTIPASMH-IELIDPPNNDYIFLPTTSYSEQVVALLEYIARE 140 (392)
T ss_dssp HHHHHHHHTTCCSCEEE---CCHHHHHHHHHHHHHHTCCEEESCCC-GGGGSSSSCTTBCEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCcEEEEe---CCcHHHHHHHHHHHhCCceEEecccC-hhhccCCCCCceEecCCChHHHHHHHHHHHHHh
Confidence 335555555 8888883 34566778888999999997663211 10000 011 0 0111 12222 2
Q ss_pred CCCE-EEEE-cCccccccCcHHHHHHHHHHHHHcCCCcE---EecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021545 146 VGAH-IELI-SKEEYSKIGSVTLTNILKEKLLKEGRRPY---VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 220 (311)
Q Consensus 146 ~GAe-V~~v-~~~~~~~~~~~~~~~~~~~~l~~~g~~~y---~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~i 220 (311)
+|.+ |..+ .+..|.. ...+...+.+++.+-... .++.+..+ +.....+|.+ ..+|.|
T Consensus 141 ~g~~~iaii~~~~~~g~----~~~~~~~~~l~~~G~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~dav 202 (392)
T 3lkb_A 141 KKGAKVALVVHPSPFGR----APVEDARKAARELGLQIVDVQEVGSGNLD------NTALLKRFEQ--------AGVEYV 202 (392)
T ss_dssp CTTCEEEEEECSSHHHH----TTHHHHHHHHHHHTCEEEEEEECCTTCCC------CHHHHHHHHH--------TTCCEE
T ss_pred CCCCEEEEEEeCCchhh----hHHHHHHHHHHHcCCeEEEEEeeCCCCcC------HHHHHHHHHh--------cCCCEE
Confidence 5654 4333 3222321 122334445555443211 12222111 1122233322 258988
Q ss_pred EEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 221 VVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 221 vv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
|++. ++..+.++...++..+.++++++.....++
T Consensus 203 ~~~~-~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (392)
T 3lkb_A 203 VHQN-VAGPVANILKDAKRLGLKMRHLGAHYTGGP 236 (392)
T ss_dssp EEES-CHHHHHHHHHHHHHTTCCCEEEECGGGCSH
T ss_pred EEec-CcchHHHHHHHHHHcCCCceEEEecCcccH
Confidence 8754 677889999999999999999887554444
No 235
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=51.53 E-value=1.3e+02 Score=26.52 Aligned_cols=156 Identities=8% Similarity=-0.052 Sum_probs=77.9
Q ss_pred HHHHHHHH--cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc------------------CCCCCccch-
Q 021545 81 FLMADAVA--QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV------------------DQDPGLIGN- 139 (311)
Q Consensus 81 ~ll~~a~~--~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~------------------~~~~~~~~n- 139 (311)
..+..+++ ++++.||..+ . ......+...+...|++++++-....... ..+....+.
T Consensus 51 ~~i~~~i~~~~~vDgiIi~~-~-~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~ 128 (350)
T 3h75_A 51 QQARELFQGRDKPDYLMLVN-E-QYVAPQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMVGDDEEAGYR 128 (350)
T ss_dssp HHHHHHHHSSSCCSEEEEEC-C-SSHHHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEECCHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEeC-c-hhhHHHHHHHHHhCCCcEEEEcCCCChHHHhhhcCCchhccceeeeecCChHHHHHH
Confidence 44666666 5889888764 2 23444555667778999888764432110 000000111
Q ss_pred -HHHHHHCC--------CEEEEEcCccccccCcHHHHHHHHHHHHHcCCC--cEEecCCCCchhHHHHHHHHHHHHHHHH
Q 021545 140 -LLVERLVG--------AHIELISKEEYSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQL 208 (311)
Q Consensus 140 -~~~~~~~G--------AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~--~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~ 208 (311)
...+...| .+|..+.... .......+.+...+.+++.+.. ..++... .+. ..++ ..+.+++++-
T Consensus 129 a~~~L~~~g~~~~~g~~~~i~~i~g~~-~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~L~~~ 203 (350)
T 3h75_A 129 MLKELLHKLGPVPAGHGIELLAFSGLK-VTPAAQLRERGLRRALAEHPQVHLRQLVYGE-WNR--ERAY-RQAQQLLKRY 203 (350)
T ss_dssp HHHHHHHHHCCCCSSCCEEEEEEESCT-TSHHHHHHHHHHHHHHHHCTTEEEEEEEECT-TCH--HHHH-HHHHHHHHHC
T ss_pred HHHHHHHHhhhhcCCCCceEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCeEEEEEeeCC-CcH--HHHH-HHHHHHHHhC
Confidence 11122223 3666554321 1001122334444555554421 1122221 122 2333 3444555432
Q ss_pred hcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 209 QTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 209 ~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
.++|.||+. +...+.|+..++++.+. ++.|+|++-
T Consensus 204 ------~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~ 242 (350)
T 3h75_A 204 ------PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNS 242 (350)
T ss_dssp ------TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESC
T ss_pred ------CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCC
Confidence 357888764 56778899999998874 578888763
No 236
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=51.51 E-value=35 Score=30.87 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=34.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |.-|++++..|+.+|.+-++.+... ..++.+++.+|++.+.
T Consensus 173 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 173 HKVLVCG-A-GPIGMVTLLVAKAMGAAQVVVTDLS----------ATRLSKAKEIGADLVL 221 (356)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEEESC----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHhCCCEEE
Confidence 4555566 3 7899999999999999444444322 1367788899997443
No 237
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=51.51 E-value=27 Score=29.05 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=41.3
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++ ....||||.+.............+++
T Consensus 56 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~----t~~PVIgVP~~~~~l~G~daLlSivq 113 (170)
T 1xmp_A 56 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAK----TNLPVIGVPVQSKALNGLDSLLSIVQ 113 (170)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHTT----CCSCEEEEEECCTTTTTHHHHHHHHC
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhc----cCCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 455555442 24789999999999999999987 35789999998765545454444444
No 238
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=51.48 E-value=29 Score=32.07 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=33.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCC-cEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl-~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..| + |--|..++.+|+.+|. +.+.+.+. ..++.+++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~-----------~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 187 SHVYIAG-A-GPVGRCAAAGARLLGAACVIVGDQN-----------PERLKLLSDAGFETI 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEEESC-----------HHHHHHHHTTTCEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCC-----------HHHHHHHHHcCCcEE
Confidence 4566566 3 7899999999999998 44444332 135778889999843
No 239
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=51.38 E-value=1e+02 Score=25.68 Aligned_cols=31 Identities=19% Similarity=0.028 Sum_probs=23.0
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 5 vlIt-Ga-sggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 5 AIVT-GA-SSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEe-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 54 4789999999999999887766543
No 240
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=51.34 E-value=1.1e+02 Score=25.75 Aligned_cols=156 Identities=9% Similarity=0.006 Sum_probs=74.7
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCC-ccchH-------H-HHHH-CC-CE
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG-LIGNL-------L-VERL-VG-AH 149 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~-~~~n~-------~-~~~~-~G-Ae 149 (311)
..+....+++++.||..+ ...+........++..|++++++-...... ...+. ...|. . +++. .| .+
T Consensus 48 ~~i~~l~~~~vdgiIi~~-~~~~~~~~~~~~~~~~~iPvV~i~~~~~~~-~~~~~V~~D~~~~g~~a~~~L~~~g~g~~~ 125 (271)
T 2dri_A 48 ANVQDLTVRGTKILLINP-TDSDAVGNAVKMANQANIPVITLDRQATKG-EVVSHIASDNVLGGKIAGDYIAKKAGEGAK 125 (271)
T ss_dssp HHHHHHTTTTEEEEEECC-SSTTTTHHHHHHHHHTTCCEEEESSCCSSS-CCSEEEEECHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHcCCCEEEEeC-CChHHHHHHHHHHHHCCCcEEEecCCCCCC-ceeEEEecChHHHHHHHHHHHHHHcCCCCe
Confidence 345556667788888653 222221223334566799887764321110 00000 01111 1 1222 13 46
Q ss_pred EEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcch
Q 021545 150 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 228 (311)
Q Consensus 150 V~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 228 (311)
+..+... ... ...++.+...+.+++.+-....+..+..+. ..|| ..+.+++++- ..||.||+. +..
T Consensus 126 I~~i~g~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~~--nD~ 192 (271)
T 2dri_A 126 VIELQGIAGTS--AARERGEGFQQAVAAHKFNVLASQPADFDR--IKGL-NVMQNLLTAH------PDVQAVFAQ--NDE 192 (271)
T ss_dssp EEEEECCTTCH--HHHHHHHHHHHHHHHHTCEEEEEEECTTCH--HHHH-HHHHHHHHHC------TTCCEEEES--SHH
T ss_pred EEEEECCCCCc--cHhHHHHHHHHHHhcCCCEEEEecCCCCCH--HHHH-HHHHHHHHhC------CCccEEEEC--CCc
Confidence 7666431 111 111233334445555442111111121122 2344 3445555432 358998875 566
Q ss_pred hHHHHHHHHhhCCC-CCeEEEEec
Q 021545 229 TIAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 229 t~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
++.|+..++++.+. ++.|+|++-
T Consensus 193 ~A~g~~~al~~~g~~dv~vvGfD~ 216 (271)
T 2dri_A 193 MALGALRALQTAGKSDVMVVGFDG 216 (271)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCcEEEEecC
Confidence 78899999988764 788998874
No 241
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=51.26 E-value=28 Score=31.37 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=33.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..|+ |.-|++++..|+.+|.+.+++.+. ..++..++.+|++.+
T Consensus 166 ~~VlV~Ga--G~vG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 166 EWVAIYGI--GGLGHVAVQYAKAMGLNVVAVDIG-----------DEKLELAKELGADLV 212 (339)
T ss_dssp CEEEEECC--STTHHHHHHHHHHTTCEEEEECSC-----------HHHHHHHHHTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHHCCCCEE
Confidence 45555665 459999999999999865554332 135777888999754
No 242
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=51.18 E-value=1.1e+02 Score=25.80 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=22.4
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+
T Consensus 12 ~k~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 12 DRIILVT-GA-SDGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TCEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEe-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3334555 54 467888888888888887666543
No 243
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=50.92 E-value=1.1e+02 Score=25.77 Aligned_cols=33 Identities=6% Similarity=-0.131 Sum_probs=25.3
Q ss_pred CCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 217 FDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 217 ~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
+|.||+. +..++.|+..++++.+. ++.|+|++-
T Consensus 202 ~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 238 (298)
T 3tb6_A 202 PTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYDD 238 (298)
T ss_dssp CSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecCC
Confidence 8998864 56778899999998774 567777763
No 244
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=50.86 E-value=41 Score=30.27 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=34.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..++..|.+.+++.+.. .+...++.+|++.+.
T Consensus 171 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~V~~~~~~~-----------~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 171 HWVAISGA-AGGLGSLAVQYAKAMGYRVLGIDGGE-----------GKEELFRSIGGEVFI 219 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECST-----------THHHHHHHTTCCEEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCcEEEEcCCH-----------HHHHHHHHcCCceEE
Confidence 45555554 57899999999999999766655332 246677789987543
No 245
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=50.84 E-value=33 Score=28.84 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 66 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivq 123 (182)
T 1u11_A 66 ADYARTAAE----RGLNVIIAGAGGAAHLPGMCAAWT----RLPVLGVPVESRALKGMDSLLSIVQ 123 (182)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHC
T ss_pred HHHHHHHHh----CCCcEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 455555442 237899999999999999999984 5689999998765445444444443
No 246
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=50.63 E-value=1.2e+02 Score=25.89 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=29.1
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~g 253 (311)
.+||.||+. +...+.|+..++++.+. ++.|+|++-..
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~~ 224 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDSR 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence 468999874 56778899999998763 67899998543
No 247
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=50.56 E-value=1.2e+02 Score=25.97 Aligned_cols=32 Identities=16% Similarity=-0.025 Sum_probs=24.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 13 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 13 VAIIT-GA-CGGIGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 34555 54 4789999999999999987776544
No 248
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=50.44 E-value=80 Score=27.45 Aligned_cols=30 Identities=27% Similarity=0.178 Sum_probs=20.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|--|+++|....+.|.+++++-
T Consensus 10 ~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 10 IAIVT-GA-SSGIGRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEE
Confidence 34554 54 46788888888888888755543
No 249
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=50.31 E-value=27 Score=31.85 Aligned_cols=50 Identities=8% Similarity=0.021 Sum_probs=34.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..|+ |.-|.+++..|+.+|.+.+++.+.... ..+..+++.+|++.+
T Consensus 182 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--------~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 182 RKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPT--------EVEQTVIEETKTNYY 231 (366)
T ss_dssp CEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCC--------HHHHHHHHHHTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccc--------hHHHHHHHHhCCcee
Confidence 45555564 889999999999999976665443200 135677888999866
No 250
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=50.02 E-value=98 Score=26.70 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=21.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|.-|+++|....+.|.+++++.
T Consensus 31 ~vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 31 IALVT-GG-SRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEe-CC-CChHHHHHHHHHHHCCCEEEEEe
Confidence 34555 54 47889999998888898766654
No 251
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=49.99 E-value=1.2e+02 Score=25.69 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=27.5
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEe
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 250 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~ 250 (311)
..+|.||+. +...+.|+..++++.+. ++.|+|++
T Consensus 187 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 187 NTPKALFCN--SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEEc--CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 468999864 66788899999998773 67899988
No 252
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=49.98 E-value=1.1e+02 Score=25.59 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=72.0
Q ss_pred HHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC---C--ccch--HHHHHHCCCE-EEEEc
Q 021545 83 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP---G--LIGN--LLVERLVGAH-IELIS 154 (311)
Q Consensus 83 l~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~---~--~~~n--~~~~~~~GAe-V~~v~ 154 (311)
+..+.+++++.|| .+... + -..+ .. .|++++++-........-.. . ..+. ...+...|.+ +.++.
T Consensus 53 ~~~l~~~~vdgiI-~~~~~-~-~~~~---~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~ 125 (280)
T 3gyb_A 53 ITSALSMRPDGII-IAQDI-P-DFTV---PD-SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLR 125 (280)
T ss_dssp HHHHHTTCCSEEE-EESCC--------------CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhCCCCEEE-ecCCC-C-hhhH---hh-cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEe
Confidence 5555678899999 65332 2 1222 22 89998877543301000000 0 0111 1223334654 55554
Q ss_pred CccccccCcHHHHHHHHHHHHHcCCCcEE-ecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHH
Q 021545 155 KEEYSKIGSVTLTNILKEKLLKEGRRPYV-IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGL 233 (311)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~g~~~y~-ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl 233 (311)
..... ...+.+...+.+++.+..... +-.+ +.....|| ..+.+++++- ..+|.||+. +...+.|+
T Consensus 126 ~~~~~---~~~R~~gf~~~l~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~~a~g~ 191 (280)
T 3gyb_A 126 VGSGA---GLRRFESFEATMRAHGLEPLSNDYLG--PAVEHAGY-TETLALLKEH------PEVTAIFSS--NDITAIGA 191 (280)
T ss_dssp CSSHH---HHHHHHHHHHHHHHTTCCCEECCCCS--CCCHHHHH-HHHHHHHHHC------TTCCEEEES--SHHHHHHH
T ss_pred CCCch---HHHHHHHHHHHHHHcCcCCCcccccC--CCCHHHHH-HHHHHHHhCC------CCCCEEEEC--ChHHHHHH
Confidence 32111 222334445556555433221 1111 22222344 3445555442 468999875 56778899
Q ss_pred HHHHhhCC----CCCeEEEEec
Q 021545 234 SLGSWLGT----LKAKVHAFSV 251 (311)
Q Consensus 234 ~~~~~~~~----~~~rVigV~~ 251 (311)
..++++.+ .++.|+|++-
T Consensus 192 ~~al~~~g~~vP~di~vvg~d~ 213 (280)
T 3gyb_A 192 LGAARELGLRVPEDLSIIGYDN 213 (280)
T ss_dssp HHHHHHHTCCTTTTCEEEEESC
T ss_pred HHHHHHcCCCCCCeeEEEEECC
Confidence 99998876 3678888874
No 253
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=49.95 E-value=1.2e+02 Score=25.63 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=23.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
+++..|+ +|.-|.++|....+.|.+++++.+
T Consensus 23 ~vlItGa-sggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 23 VALTTGA-GRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 3443454 578999999999999998877765
No 254
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=49.92 E-value=31 Score=28.65 Aligned_cols=48 Identities=13% Similarity=0.013 Sum_probs=35.7
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.+++|++..|.-+.+.|+..++- ...||||.+.++..........+++
T Consensus 61 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 108 (169)
T 3trh_A 61 GCAVFIAAAGLAAHLAGTIAAHT----LKPVIGVPMAGGSLGGLDALLSTVQ 108 (169)
T ss_dssp TEEEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCSTTTTHHHHHHHHC
T ss_pred CCcEEEEECChhhhhHHHHHhcC----CCCEEEeecCCCCCCCHHHHHHhhc
Confidence 37799999999999999999874 5689999998765444444444443
No 255
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=49.91 E-value=66 Score=29.61 Aligned_cols=99 Identities=12% Similarity=0.019 Sum_probs=49.2
Q ss_pred HHHHCC-CEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021545 142 VERLVG-AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 220 (311)
Q Consensus 142 ~~~~~G-AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~i 220 (311)
.++.+| -++.+|.+...... ...+++.+.|++.+-...+++....||.- ....++.+++.+ ..+| +
T Consensus 25 ~l~~~g~~~~livtd~~~~~~---g~~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~ 91 (386)
T 1rrm_A 25 EVKRRGYQKALIVTDKTLVQC---GVVAKVTDKMDAAGLAWAIYDGVVPNPTI-----TVVKEGLGVFQN----SGAD-Y 91 (386)
T ss_dssp HHHHHTCCEEEEECBHHHHHT---THHHHHHHHHHHTTCEEEEECBCCSSCBH-----HHHHHHHHHHHH----HTCS-E
T ss_pred HHHHcCCCEEEEEECcchhhc---hHHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-E
Confidence 344456 45655554221111 13355566676654333345544445432 233455555442 2365 6
Q ss_pred EEeCCcchh--HHHHHHHHhhC----------------CCCCeEEEEeccC
Q 021545 221 VVACGSGGT--IAGLSLGSWLG----------------TLKAKVHAFSVCD 253 (311)
Q Consensus 221 vv~vGtGGt--~aGl~~~~~~~----------------~~~~rVigV~~~g 253 (311)
|+++|+|.. +++.+...... .+..++|.|..--
T Consensus 92 IIavGGGsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 92 LIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp EEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred EEEeCChHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 678888765 44544443311 2467888887754
No 256
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=49.86 E-value=34 Score=28.55 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=40.4
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++- ...||||.+.++..........+++
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 114 (174)
T 3kuu_A 57 FSFAEQAEA----NGLHVIIAGNGGAAHLPGMLAAKT----LVPVLGVPVQSAALSGVDSLYSIVQ 114 (174)
T ss_dssp HHHHHHTTT----TTCSEEEEEEESSCCHHHHHHHTC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEECChhhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHhhh
Confidence 345454432 347899999999999999999873 5689999998765444444444444
No 257
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=49.84 E-value=1.1e+02 Score=26.18 Aligned_cols=32 Identities=22% Similarity=0.072 Sum_probs=22.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 22 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 22 RALIT-GA-TKGIGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 33454 54 4678999999888899887666543
No 258
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=49.77 E-value=1.2e+02 Score=25.95 Aligned_cols=34 Identities=21% Similarity=0.070 Sum_probs=23.4
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 27 ~k~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 27 DKVAFIT-GG-GSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TCEEEEE-TT-TSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEe-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344565 54 4678888888888888877766543
No 259
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=49.63 E-value=1.3e+02 Score=26.19 Aligned_cols=157 Identities=9% Similarity=-0.060 Sum_probs=76.7
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCc-----ccCCCC----C--ccch---HHHHH
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LVDQDP----G--LIGN---LLVER 144 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~-----~~~~~~----~--~~~n---~~~~~ 144 (311)
....+..+.+++++.||..+ . .+........+...|++++++.....+ .....+ . ..+. ..+++
T Consensus 93 ~~~~i~~l~~~~vdgiIi~~-~-~~~~~~~~~~~~~~~ip~V~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~ 170 (342)
T 1jx6_A 93 QSLSLMEALKSKSDYLIFTL-D-TTRHRKFVEHVLDSTNTKLILQNITTPVREWDKHQPFLYVGFDHAEGSRELATEFGK 170 (342)
T ss_dssp HHHHHHHHHHTTCSEEEECC-S-SSTTHHHHHHHHHHCSCEEEEETCCSCBGGGTTSCCSEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeC-C-hHhHHHHHHHHHHcCCCEEEEecCCCcccccccCCCceEEecCcHHHHHHHHHHHHH
Confidence 33456677778899988642 2 222122233345679998887554221 000000 0 0011 12333
Q ss_pred HCC--CEEEEEcCccccccCcHHHHHHHHHHHHHcCC-CcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Q 021545 145 LVG--AHIELISKEEYSKIGSVTLTNILKEKLLKEGR-RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 221 (311)
Q Consensus 145 ~~G--AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~-~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~iv 221 (311)
.+| .+|..+...... ...++.+...+.+++.+. ....+-.+..+. ..|+ ....+++++- ..+|.||
T Consensus 171 ~~Gg~~~I~~i~~~~~~--~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~ 239 (342)
T 1jx6_A 171 FFPKHTYYSVLYFSEGY--ISDVRGDTFIHQVNRDNNFELQSAYYTKATK--QSGY-DAAKASLAKH------PDVDFIY 239 (342)
T ss_dssp HSCTTCEEEEECCSTTH--HHHHHHHHHHHHHHHHHCCEEEEEECCCSSH--HHHH-HHHHHHHHHC------CCCSEEE
T ss_pred HcCCCceEEEEEcCCcc--hhhHHHHHHHHHHHhCCCcEEEEEecCCCCH--HHHH-HHHHHHHHhC------CCccEEE
Confidence 356 456666432111 111223334444544432 111121222222 2343 3445555432 4589998
Q ss_pred EeCCcchhHHHHHHHHhhCCC-CCeEEEEe
Q 021545 222 VACGSGGTIAGLSLGSWLGTL-KAKVHAFS 250 (311)
Q Consensus 222 v~vGtGGt~aGl~~~~~~~~~-~~rVigV~ 250 (311)
+ .+...+.|+..++++.+. ++.|+|++
T Consensus 240 ~--~nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 240 A--CSTDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp E--SSHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred E--CCChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 7 456778899999988764 67777665
No 260
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=49.40 E-value=34 Score=28.11 Aligned_cols=47 Identities=17% Similarity=0.060 Sum_probs=37.6
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.+++|++..|.-+.+.|+..++- ...||||.+.++...... ...+++
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~d-LlS~vq 104 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGFV----KGATIACPPPSDSFAGAD-IYSSLR 104 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHHS----SSCEEECCCCCCGGGGTH-HHHHHC
T ss_pred CCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCcc-HHHHHh
Confidence 48999999999999999999974 468999999876654555 666665
No 261
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.31 E-value=28 Score=32.26 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=35.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|.+++..|+.+|.+-++.+... ..++.+++.+||+.++
T Consensus 215 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 263 (404)
T 3ip1_A 215 DNVVILGG--GPIGLAAVAILKHAGASKVILSEPS----------EVRRNLAKELGADHVI 263 (404)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSC----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHcCCCEEE
Confidence 45655664 7899999999999999555554332 2468888999998655
No 262
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=49.26 E-value=1.1e+02 Score=26.07 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=23.8
Q ss_pred CEEEEeCCc-cchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s-~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |++ +|--|+++|....+.|.+++++.+.
T Consensus 8 ~vlVT-Gas~~~gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 8 KGLIV-GVANNKSIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp EEEEE-CCCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEE-CCCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 654 2678999999999999887776544
No 263
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=49.04 E-value=40 Score=27.81 Aligned_cols=58 Identities=9% Similarity=0.093 Sum_probs=40.0
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhHh
Q 021545 202 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 267 (311)
Q Consensus 202 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~~ 267 (311)
.|+.++..+ ..+++|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 48 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 105 (163)
T 3ors_A 48 VQFASEARE----RGINIIIAGAGGAAHLPGMVASLT----TLPVIGVPIETKSLKGIDSLLSIVQ 105 (163)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHhh
Confidence 345554432 347899999999999999999974 5689999987654334444444444
No 264
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=48.97 E-value=1.2e+02 Score=25.62 Aligned_cols=158 Identities=13% Similarity=0.034 Sum_probs=76.1
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccch--------HHHHHHCC-C-EE
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN--------LLVERLVG-A-HI 150 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n--------~~~~~~~G-A-eV 150 (311)
..+...++++++.||..+ ...+........++..|++++++-+..........-...| ..+++.+| - ++
T Consensus 48 ~~i~~l~~~~vdgiIi~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~gg~~~I 126 (283)
T 2ioy_A 48 SNVEDLIQQKVDVLLINP-VDSDAVVTAIKEANSKNIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGKGNV 126 (283)
T ss_dssp HHHHHHHHTTCSEEEECC-SSTTTTHHHHHHHHHTTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCCEEEEeC-CchhhhHHHHHHHHHCCCeEEEecCCCCCcceeEEEecChHHHHHHHHHHHHHHcCCCceE
Confidence 446666778899988653 2222222233446678999877643211100000000111 12334435 3 56
Q ss_pred EEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchh
Q 021545 151 ELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 229 (311)
Q Consensus 151 ~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt 229 (311)
..+... ... ...++.+...+.+++. +..-+......+.....|+ ..+.+++++- .++|.||+. +..+
T Consensus 127 ~~i~g~~~~~--~~~~R~~Gf~~al~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~ai~~~--nD~~ 194 (283)
T 2ioy_A 127 VELEGIPGAS--AARDRGKGFDEAIAKY-PDIKIVAKQAADFDRSKGL-SVMENILQAQ------PKIDAVFAQ--NDEM 194 (283)
T ss_dssp EEEECCTTCH--HHHHHHHHHHHHHTTC-TTEEEEEEEECTTCHHHHH-HHHHHHHHHC------SCCCEEEES--SHHH
T ss_pred EEEECCCCCc--cHHHHHHHHHHHHHhC-CCCEEEeeccCCCCHHHHH-HHHHHHHHhC------CCccEEEEC--CchH
Confidence 555421 111 0112333344445432 1211111100111112343 3445555432 358998874 4567
Q ss_pred HHHHHHHHhhCCC-CCeEEEEec
Q 021545 230 IAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 230 ~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
+.|+..++++.+. ++.|+|++-
T Consensus 195 A~g~~~al~~~G~~di~viG~D~ 217 (283)
T 2ioy_A 195 ALGAIKAIEAANRQGIIVVGFDG 217 (283)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEC
T ss_pred HHHHHHHHHHCCCCCcEEEEeCC
Confidence 8899999998875 888999874
No 265
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=48.96 E-value=30 Score=31.31 Aligned_cols=53 Identities=25% Similarity=0.270 Sum_probs=36.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|--|++++..|+.+|.+.+++.+.... .......++.+||+.+.
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~-------~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 169 DWFIQNGG-TSAVGKYASQIGKLLNFNSISVIRDRPN-------LDEVVASLKELGATQVI 221 (364)
T ss_dssp CEEEESCT-TSHHHHHHHHHHHHHTCEEEEEECCCTT-------HHHHHHHHHHHTCSEEE
T ss_pred cEEEECCC-CcHHHHHHHHHHHHCCCEEEEEecCccc-------cHHHHHHHHhcCCeEEE
Confidence 56665654 5789999999999999987777654321 00124566889998554
No 266
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=48.61 E-value=35 Score=30.67 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=34.8
Q ss_pred CEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..| + |.-|++++..|+.+ |.+.+++... ..++.+++.+||+.+..
T Consensus 173 ~~vlv~G-a-G~vG~~a~qla~~~g~~~Vi~~~~~-----------~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 173 STAVVIG-V-GGLGHVGIQILRAVSAARVIAVDLD-----------DDRLALAREVGADAAVK 222 (345)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHCCCEEEEEESC-----------HHHHHHHHHTTCSEEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCC-----------HHHHHHHHHcCCCEEEc
Confidence 5565555 3 78999999999998 5555554332 24688899999986553
No 267
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=48.59 E-value=1.3e+02 Score=25.90 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=23.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 21 vlVT-Ga-sggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 21 AIVT-GG-ATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555 54 4789999999999999887776543
No 268
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=48.51 E-value=25 Score=31.78 Aligned_cols=49 Identities=14% Similarity=0.020 Sum_probs=34.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|.+++.+|+.+|.+-++.+... ..++.+++.+||+.+.
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 168 DTVCVIGI--GPVGLMSVAGANHLGAGRIFAVGSR----------KHCCDIALEYGATDII 216 (352)
T ss_dssp CCEEEECC--SHHHHHHHHHHHTTTCSSEEEECCC----------HHHHHHHHHHTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCcEEEEECCC----------HHHHHHHHHhCCceEE
Confidence 44544563 8899999999999999544444332 2367888999998654
No 269
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=48.48 E-value=27 Score=31.25 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=35.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHH-HHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVE-RLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~-~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..+ +.+|++.+.
T Consensus 151 ~~vlI~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 151 ETVVISGA-AGAVGSVAGQIARLKGCRVVGIAGGA-----------EKCRFLVEELGFDGAI 200 (336)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHHcCCCEEE
Confidence 45655554 47899999999999999776665332 356666 889997654
No 270
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=48.17 E-value=48 Score=27.42 Aligned_cols=47 Identities=13% Similarity=0.122 Sum_probs=34.5
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhH
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 266 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~ 266 (311)
.+++|++..|.-+.+.|+..++- ...||||.+..+..........++
T Consensus 60 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~v 106 (166)
T 3oow_A 60 GLKVIIAGAGGAAHLPGMVAAKT----TLPVLGVPVKSSTLNGQDSLLSIV 106 (166)
T ss_dssp TCCEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCTTTTTHHHHHHHH
T ss_pred CCcEEEEECCcchhhHHHHHhcc----CCCEEEeecCcCCCCCHHHHHHHh
Confidence 47899999999999999999874 568999998765433333333333
No 271
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=47.83 E-value=1.3e+02 Score=25.72 Aligned_cols=35 Identities=17% Similarity=0.032 Sum_probs=27.6
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
.++|.||+. +..++.|+..++++.+. ++.|+|++-
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 234 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGINT 234 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEcC
Confidence 468999874 56778899999998773 678999864
No 272
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=47.82 E-value=36 Score=31.55 Aligned_cols=47 Identities=13% Similarity=0.035 Sum_probs=33.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+|+..|+ |+.|+++|..++.+|.+ +++.+... .+....+.+|++++
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~-V~~~d~~~----------~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGV--GVAGLQAIATAKRLGAV-VMATDVRA----------ATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEECSCS----------TTHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCE-EEEEeCCH----------HHHHHHHHcCCeEE
Confidence 45565664 89999999999999997 44443221 23556677999865
No 273
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=47.52 E-value=56 Score=29.71 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=34.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
..||| |+ ++--|+++|....+.|.+++++.+......+..-........++..|.++..+.
T Consensus 47 ~vlVT-Ga-s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~ 107 (346)
T 3kvo_A 47 TVFIT-GA-SRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107 (346)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEe-CC-ChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE
Confidence 34555 54 467899999999999998888776543210000000112334455676665554
No 274
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=47.41 E-value=1.2e+02 Score=25.17 Aligned_cols=22 Identities=27% Similarity=0.214 Sum_probs=17.2
Q ss_pred EEEeCCccchHHHHHHHHHHHcCC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNL 117 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl 117 (311)
||| |+ +|--|+++|....+.|.
T Consensus 6 lIT-Ga-sggiG~~la~~l~~~G~ 27 (244)
T 2bd0_A 6 LIT-GA-GKGIGRAIALEFARAAR 27 (244)
T ss_dssp EEE-TT-TSHHHHHHHHHHHHHTT
T ss_pred EEE-CC-CChHHHHHHHHHHHhcC
Confidence 454 54 47899999998888888
No 275
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=47.40 E-value=1.4e+02 Score=25.86 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=22.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|--|+++|..-.+.|.+++++.
T Consensus 11 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 11 VALVT-GA-AKRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCeEEEEc
Confidence 34454 54 46789999999889998877765
No 276
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=47.36 E-value=9.1 Score=32.58 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=40.8
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHH---HCCCEEE
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER---LVGAHIE 151 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~---~~GAeV~ 151 (311)
.+.|.++||.+|- ..|.| .++|.-|..+|++++++.+-..+..++ .....+..++ .+|+.|.
T Consensus 106 ~~~gi~~lvi~Gv-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~aL~~m~~~~~~g~~v~ 171 (204)
T 1yzv_A 106 DLPEVEQVVLWGF-ETHVCILQTAAALLDMKKKVVIAVDGCGSQSQG--DHCTAIQLMQSWSGDGCYIS 171 (204)
T ss_dssp SSTTEEEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHTTGGGTEEEE
T ss_pred HhCCCCEEEEEEe-ccCHHHHHHHHHHHHCCCEEEEECCccCCCCHH--HHHHHHHHHHHHhcCCeEEe
Confidence 3468889998864 45555 578888999999999887665432110 0123356677 6787654
No 277
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=47.34 E-value=3.4e+02 Score=32.52 Aligned_cols=32 Identities=6% Similarity=-0.025 Sum_probs=26.0
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+++|+-|+++|..-++.|.++++.-+.
T Consensus 2139 aLVT-GAs~GsIG~AiA~~La~~GA~Vvi~~r~ 2170 (3089)
T 3zen_D 2139 AVVT-GASKGSIAASVVGQLLDGGATVIATTSR 2170 (3089)
T ss_dssp EEEE-SCCTTSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEe-CCChhHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 7777779999999999999998887554
No 278
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=47.09 E-value=1.2e+02 Score=25.12 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=33.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
+++..|+ +|.-|+++|..-.+.|.+.+++.+..... ......++..|.++..+.-
T Consensus 13 ~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~ 67 (255)
T 1fmc_A 13 CAIITGA-GAGIGKEIAITFATAGASVVVSDINADAA-------NHVVDEIQQLGGQAFACRC 67 (255)
T ss_dssp EEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHH-------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHHHHHhCCceEEEEc
Confidence 3443454 58899999999999999877776542210 1112344556777766543
No 279
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=46.86 E-value=1.3e+02 Score=25.32 Aligned_cols=31 Identities=13% Similarity=0.047 Sum_probs=22.4
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
+++..|+ +|--|+++|....+.|.+++++.+
T Consensus 16 ~vlITGa-sggiG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 16 TVLVTGG-TKGIGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 578999999988888988776654
No 280
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=46.81 E-value=42 Score=30.57 Aligned_cols=49 Identities=16% Similarity=0.054 Sum_probs=34.5
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |.-|++++..|+.+|.+-++.+... ..++.+++.+||+.+.
T Consensus 193 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 193 STCAVFG-L-GGVGFSAIVGCKAAGASRIIGVGTH----------KDKFPKAIELGATECL 241 (373)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEECSC----------GGGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEECCC----------HHHHHHHHHcCCcEEE
Confidence 4565566 3 7899999999999998544444322 1357788899997543
No 281
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=46.68 E-value=21 Score=28.93 Aligned_cols=24 Identities=25% Similarity=0.094 Sum_probs=21.0
Q ss_pred eCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 97 IGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 97 ~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
.|| |=.|.++|...++.|++++||
T Consensus 8 IGa--GpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 8 IGT--GIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred ECc--CHHHHHHHHHHHHCCCCEEEE
Confidence 454 778999999999999998887
No 282
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=46.67 E-value=1.5e+02 Score=26.36 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=22.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|--|+++|....+.|.+++++.
T Consensus 48 ~~lVT-Ga-s~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 48 VALVT-GA-AKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEc
Confidence 34454 54 47899999999999999877765
No 283
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=46.63 E-value=1.3e+02 Score=25.17 Aligned_cols=36 Identities=14% Similarity=0.067 Sum_probs=26.9
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEecc
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~ 252 (311)
..+|.|| +.+...+.|+..++++.+. ++.|+|++-.
T Consensus 179 ~~~~ai~--~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 218 (276)
T 2h0a_A 179 SPPLNVF--AGADQVALGVLEEAVRLGLTPGRDVRVLGFDGH 218 (276)
T ss_dssp CSSEEEE--CSSHHHHHHHHHHHHTTSCTTTTSEEEEEESCC
T ss_pred CCCCEEE--ECCcHHHHHHHHHHHHcCCCCCCCeEEEEeCCC
Confidence 3588888 4577888999999998774 4567877643
No 284
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=46.53 E-value=31 Score=31.58 Aligned_cols=49 Identities=12% Similarity=0.020 Sum_probs=34.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|.+++.+|+.+|.+-++.+.... .++.+++.+||+.+.
T Consensus 195 ~~VlV~Ga--G~vG~~a~q~a~~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 195 SNVAIFGL--GTVGLAVAEGAKTAGASRIIGIDIDS----------KKYETAKKFGVNEFV 243 (378)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHHTCSCEEEECSCT----------THHHHHHTTTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHcCCcEEE
Confidence 44554564 78999999999999995444443221 368889999998654
No 285
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=46.52 E-value=26 Score=32.01 Aligned_cols=49 Identities=6% Similarity=-0.029 Sum_probs=35.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+. ..++..++.+|++.+.
T Consensus 165 ~~VlV~Ga-~G~iG~~~~q~a~~~Ga~Vi~~~~~-----------~~~~~~~~~~Ga~~~~ 213 (362)
T 2c0c_A 165 KKVLVTAA-AGGTGQFAMQLSKKAKCHVIGTCSS-----------DEKSAFLKSLGCDRPI 213 (362)
T ss_dssp CEEEETTT-TBTTHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEeCC-CcHHHHHHHHHHHhCCCEEEEEECC-----------HHHHHHHHHcCCcEEE
Confidence 45665653 4789999999999999976555432 1357778889998654
No 286
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=46.01 E-value=1.4e+02 Score=25.66 Aligned_cols=57 Identities=12% Similarity=-0.013 Sum_probs=36.5
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
|...||| |+ +|--|+++|....+.|.+++++-+.... .......++..|.++..+.-
T Consensus 33 gk~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 33 GRTALVT-GS-SRGIGAAIAEGLAGAGAHVILHGVKPGS-------TAAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp TCEEEET-TC-SSHHHHHHHHHHHHTTCEEEEEESSTTT-------THHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHhcCCeEEEEEe
Confidence 3334454 54 4788999999999999988777654321 11234455667888776654
No 287
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=45.82 E-value=1.4e+02 Score=25.27 Aligned_cols=32 Identities=6% Similarity=0.010 Sum_probs=22.1
Q ss_pred CEEEEeCCccch--HHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GN--hg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |++ |. -|+++|....+.|.+++++.+.
T Consensus 9 ~vlVT-Gas-g~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 9 NIVVM-GVA-NKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEEE-CCC-STTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEE-cCC-CCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 34555 544 44 8889998888889887666543
No 288
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=45.69 E-value=49 Score=30.10 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=34.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |--|++++..|+.+|.+-++.+... ..++.+++.+||+.+.
T Consensus 197 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 197 STCAVFG-L-GCVGLSAIIGCKIAGASRIIAIDIN----------GEKFPKAKALGATDCL 245 (376)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSC----------GGGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCC----------HHHHHHHHHhCCcEEE
Confidence 4565566 3 7899999999999998544444322 1357788899997544
No 289
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=45.63 E-value=41 Score=28.08 Aligned_cols=46 Identities=13% Similarity=0.106 Sum_probs=34.0
Q ss_pred CCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCchhhHHHHHHhH
Q 021545 217 FDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 266 (311)
Q Consensus 217 ~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~~~~~~i~~~~ 266 (311)
+++|++..|.-+.+.|+..++- ...||||.+..+..........++
T Consensus 63 ~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~daLlS~v 108 (174)
T 3lp6_A 63 LEVIIAGAGGAAHLPGMVAAAT----PLPVIGVPVPLGRLDGLDSLLSIV 108 (174)
T ss_dssp CCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCSSGGGHHHHHHHH
T ss_pred CCEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHh
Confidence 6789999999999999999974 568999998765433434344343
No 290
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=45.61 E-value=36 Score=30.87 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=34.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+..|.+.+++.+.. .++..++.+|++.+.
T Consensus 172 ~~vlV~Ga-sggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 172 ESVLVHGA-SGGVGLAACQIARAYGLKILGTAGTE-----------EGQKIVLQNGAHEVF 220 (351)
T ss_dssp CEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCh-----------hHHHHHHHcCCCEEE
Confidence 45555554 57899999999999999766554321 356678889997543
No 291
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=45.47 E-value=32 Score=28.02 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=32.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..|+ +|.-|++++..++..|.+.+++.+.. .+....+.+|++.+
T Consensus 40 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~ 87 (198)
T 1pqw_A 40 ERVLIHSA-TGGVGMAAVSIAKMIGARIYTTAGSD-----------AKREMLSRLGVEYV 87 (198)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHTTCCSEE
T ss_pred CEEEEeeC-CChHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCCEE
Confidence 45555554 47899999999999998766554321 24555667887644
No 292
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=45.44 E-value=40 Score=30.73 Aligned_cols=48 Identities=13% Similarity=0.116 Sum_probs=34.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++. . . .+...++.+|++.+.
T Consensus 185 ~~VlV~Ga-~G~vG~~~~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~v~ 232 (375)
T 2vn8_A 185 KRVLILGA-SGGVGTFAIQVMKAWDAHVTAVC-S-Q----------DASELVRKLGADDVI 232 (375)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHhCCCEEEEEe-C-h----------HHHHHHHHcCCCEEE
Confidence 45555554 47899999999999998765543 2 1 246677899998654
No 293
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=45.14 E-value=1.3e+02 Score=28.89 Aligned_cols=23 Identities=4% Similarity=-0.110 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHcCCcEEEEEc
Q 021545 102 SNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 102 GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|+.|.++|...+..|++++++-+
T Consensus 13 G~MG~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 13 AVMGQNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECS
T ss_pred hHHHHHHHHHHHHCCCEEEEEeC
Confidence 89999999999999998887743
No 294
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=44.85 E-value=1.3e+02 Score=25.65 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=33.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|.-|.++|....+.|.+++++.+..... ......++.+|.++..+.
T Consensus 37 vlIT-Ga-sggIG~~la~~L~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~ 89 (279)
T 3ctm_A 37 ASVT-GS-SGGIGWAVAEAYAQAGADVAIWYNSHPAD-------EKAEHLQKTYGVHSKAYK 89 (279)
T ss_dssp EEET-TT-TSSHHHHHHHHHHHHTCEEEEEESSSCCH-------HHHHHHHHHHCSCEEEEE
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcceEEE
Confidence 3454 54 57899999999999999987776543210 111233444577776554
No 295
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=44.73 E-value=1.7e+02 Score=25.95 Aligned_cols=142 Identities=12% Similarity=0.093 Sum_probs=74.4
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCC--CC-------Cc----cchHHHHHHCCC
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------GL----IGNLLVERLVGA 148 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~--~~-------~~----~~n~~~~~~~GA 148 (311)
+.++++ ++++.|| |...+....+++-.+.+.+++.+............ .| .. ..-...+..+|.
T Consensus 65 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 142 (379)
T 3n0w_A 65 AREWFDRDGVDAIF--DVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGY 142 (379)
T ss_dssp HHHHHHHSCCCEEE--ECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCceEEE--cCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCC
Confidence 444444 7888777 44556788889999999999887653222111000 01 00 011233444576
Q ss_pred E-EEEEc-CccccccCcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021545 149 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 223 (311)
Q Consensus 149 e-V~~v~-~~~~~~~~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~ 223 (311)
+ |..+. +..|.. ...+...+.+++.|... ..+|.+..+. .....+|.+ ..+|.||++
T Consensus 143 ~~vaii~~~~~~g~----~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~i~~--------~~~d~v~~~ 204 (379)
T 3n0w_A 143 KTWFLMLPDAAYGD----LMNAAIRRELTAGGGQIVGSVRFPFETQDF------SSYLLQAKA--------SGAQLIVST 204 (379)
T ss_dssp CEEEEEEESSHHHH----HHHHHHHHHHHHHTCEEEEEEEECTTCCCC------HHHHHHHHH--------HTCSEEEEC
T ss_pred cEEEEEecccchhH----HHHHHHHHHHHHcCCEEEEEEeCCCCCCCH------HHHHHHHHH--------CCCCEEEEe
Confidence 5 44443 222211 12344444555545332 1234433222 122334432 248888875
Q ss_pred CCcchhHHHHHHHHhhCCCCCe
Q 021545 224 CGSGGTIAGLSLGSWLGTLKAK 245 (311)
Q Consensus 224 vGtGGt~aGl~~~~~~~~~~~r 245 (311)
+.+..+.++...++..+.+.+
T Consensus 205 -~~~~~~~~~~~~~~~~g~~~~ 225 (379)
T 3n0w_A 205 -SGGAANINIMKQAREFGLPSK 225 (379)
T ss_dssp -CCHHHHHHHHHHHHHTTCSCS
T ss_pred -cccchHHHHHHHHHHcCCCCC
Confidence 556778888999988887665
No 296
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=44.72 E-value=32 Score=31.20 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=34.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+..|.+.+++.+.. .++..++.+|++.+.
T Consensus 164 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 164 DYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQ-----------KKLQMAEKLGAAAGF 212 (354)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCcEEE
Confidence 45555554 47899999999999999766654321 356667888997554
No 297
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=44.62 E-value=1.4e+02 Score=25.13 Aligned_cols=35 Identities=9% Similarity=0.011 Sum_probs=26.7
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC-CCeEEEEec
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFSV 251 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~-~~rVigV~~ 251 (311)
..+|.||+. +..++.|+..++++.+. ++.|+|++-
T Consensus 190 ~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d~ 225 (290)
T 2fn9_A 190 PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFDG 225 (290)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCBC
T ss_pred CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeCC
Confidence 358999874 56678899999998875 777877653
No 298
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=44.57 E-value=31 Score=31.12 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=34.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 150 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV 150 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++ ... .++..++.+|++.
T Consensus 152 ~~VlV~Ga-~g~iG~~~~q~a~~~Ga~Vi~~-~~~-----------~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 152 QTVLIQGG-GGGVGHVAIQIALARGARVFAT-ARG-----------SDLEYVRDLGATP 197 (343)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEE-ECH-----------HHHHHHHHHTSEE
T ss_pred CEEEEecC-CCHHHHHHHHHHHHCCCEEEEE-eCH-----------HHHHHHHHcCCCE
Confidence 45655554 4789999999999999986665 321 3577888999998
No 299
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.43 E-value=37 Score=27.33 Aligned_cols=30 Identities=10% Similarity=-0.119 Sum_probs=23.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHc-CCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYL-NLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~ 124 (311)
+|+.+|. |..|..+|...... |.+++++-+
T Consensus 41 ~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 41 QVLILGM--GRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp SEEEECC--SHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cEEEECC--CHHHHHHHHHHHhccCCeEEEEEC
Confidence 4555664 89999999999888 988777643
No 300
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=44.40 E-value=1.4e+02 Score=25.25 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 10 ALVT-GA-AQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CCcHHHHHHHHHHHCCCEEEEEECC
Confidence 4555 54 4789999999999999887776543
No 301
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=44.20 E-value=1.6e+02 Score=25.58 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=22.8
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|...||| |+ +|--|+++|..-.+.|.+++++.+
T Consensus 49 ~k~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 49 DRKALVT-GG-DSGIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp TCEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3344565 54 467888998888888888766543
No 302
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=44.14 E-value=1.5e+02 Score=27.55 Aligned_cols=76 Identities=14% Similarity=0.094 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchh--HHHHHHHHhh------
Q 021545 168 NILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT--IAGLSLGSWL------ 239 (311)
Q Consensus 168 ~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt--~aGl~~~~~~------ 239 (311)
+++.+.|++.+-...+++..-.||.- ....++.+++.+ ..+| +|+++|+|.. +++.+.....
T Consensus 62 ~~v~~~L~~~g~~~~~f~~v~~~p~~-----~~v~~~~~~~~~----~~~D-~IIavGGGsviD~AK~iA~~~~~~~~~~ 131 (407)
T 1vlj_A 62 DQVVDSLKKHGIEWVEVSGVKPNPVL-----SKVHEAVEVAKK----EKVE-AVLGVGGGSVVDSAKAVAAGALYEGDIW 131 (407)
T ss_dssp HHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCS-EEEEEESHHHHHHHHHHHHHTTCSSCGG
T ss_pred HHHHHHHHHcCCeEEEecCccCCCCH-----HHHHHHHHHHHh----cCCC-EEEEeCChhHHHHHHHHHHHHhCCCCHH
Confidence 45556666544333334433345431 233455555543 2465 5678888765 3444443321
Q ss_pred --------CCCCCeEEEEeccC
Q 021545 240 --------GTLKAKVHAFSVCD 253 (311)
Q Consensus 240 --------~~~~~rVigV~~~g 253 (311)
..+..++|.|..--
T Consensus 132 d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 132 DAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp GGGGTSCCCCCCCCEEEEECSC
T ss_pred HHhcccccCCCCCCEEEEeCCC
Confidence 02567888887763
No 303
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=44.04 E-value=1.4e+02 Score=24.94 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=26.3
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
.+|.||+. +...+.|+..++++.+. ++.|+|++-
T Consensus 177 ~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~ 214 (277)
T 3e61_A 177 SIDSIICS--NDLLAINVLGIVQRYHFKVPAEIQIIGYDN 214 (277)
T ss_dssp TCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeCC
Confidence 58999875 56778899999998764 567877764
No 304
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=44.03 E-value=57 Score=29.64 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=34.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |--|.+++..|+.+|.+-++.+... ..++.+++.+|++.+.
T Consensus 194 ~~VlV~G-a-G~vG~~a~qla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 194 STCAVFG-L-GAVGLAAVMGCHSAGAKRIIAVDLN----------PDKFEKAKVFGATDFV 242 (374)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSC----------GGGHHHHHHTTCCEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCC----------HHHHHHHHHhCCceEE
Confidence 4555566 3 7899999999999999544444322 1357788899997543
No 305
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=43.86 E-value=62 Score=26.86 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=26.7
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
|.+.+|| |+ +|.-|+++|......|.+++++.+..
T Consensus 21 ~~~ilVt-Ga-tG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVV-GA-NGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEE-CC-CChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3334554 54 58999999999999999998887653
No 306
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.74 E-value=1.1e+02 Score=26.13 Aligned_cols=31 Identities=29% Similarity=0.220 Sum_probs=22.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 9 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 9 AIIT-GS-SNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEe-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 54 4789999999988999887776543
No 307
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=43.73 E-value=1.2e+02 Score=26.52 Aligned_cols=85 Identities=11% Similarity=0.013 Sum_probs=45.1
Q ss_pred CcEEecCCCCchh-HHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc---
Q 021545 180 RPYVIPVGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP--- 255 (311)
Q Consensus 180 ~~y~ip~g~~n~~-~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~--- 255 (311)
+.+++|....+.. ........+.+..+++- +.+ -++++|+|.|+..++..+......-.+.-|+..|..
T Consensus 28 ~v~Vvp~~~~~~~~~~~~lg~~aA~~L~~~l------~~~-~vIGv~wG~Tl~~v~~~l~~~~~~~~~~~V~l~Gg~~~~ 100 (266)
T 3efb_A 28 DVVVVSGNDEDEETQLAMMGLHGAQLLDRLL------EPG-DIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGK 100 (266)
T ss_dssp EEEEECCCSCCHHHHHHHHHHHHHHHHHHHC------CTT-CEEEECCSHHHHHHHHTCCCCSSCCCCEEEESBCBCTTS
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHHHHHhC------CCC-CEEEEcccHHHHHHHHhcCccCCCCCeEEEEcCCCCCCC
Confidence 4678886433322 21222233344444432 223 367889999999999887543222245556666651
Q ss_pred ---hhhH-HHHHHhHhhhCC
Q 021545 256 ---DYFY-DYTQGLLDGLNA 271 (311)
Q Consensus 256 ---~~~~-~~i~~~~~g~~~ 271 (311)
.+.. .-+.++++.++.
T Consensus 101 ~~~~~~~n~i~~~lA~~~~~ 120 (266)
T 3efb_A 101 LESRYHVNTLTYSAAAKLKG 120 (266)
T ss_dssp SCGGGCHHHHHHHHHHHTTC
T ss_pred CccccCHHHHHHHHHHHhCC
Confidence 1222 224557777775
No 308
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=43.67 E-value=1.6e+02 Score=25.36 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=22.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 25 ~~lVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 25 AAVVT-GA-AKRIGRAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEe-CC-CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34554 54 4778889888888888876666543
No 309
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=43.02 E-value=1.5e+02 Score=24.89 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=32.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchH-HHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNL-LVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~-~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.... +. ..++.+|.++..+.
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 10 AVIT-GG-ANGIGRAIAERFAVEGADIAIADLVPAP----------EAEAAIRNLGRRVLTVK 60 (249)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSCCH----------HHHHHHHHTTCCEEEEE
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEcCCchh----------HHHHHHHhcCCcEEEEE
Confidence 4555 54 4789999999999999987776543311 11 13455677766554
No 310
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=42.91 E-value=58 Score=29.59 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=34.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |.-|.+++..|+.+|.+-++.+... ..++.+++.+|++.+.
T Consensus 193 ~~VlV~G-a-G~vG~~a~qla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 193 STCAVFG-L-GGVGLSVIMGCKAAGAARIIGVDIN----------KDKFAKAKEVGATECV 241 (374)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSC----------GGGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCC----------HHHHHHHHHhCCceEe
Confidence 4555566 3 7899999999999998544444322 1357788899997543
No 311
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=42.57 E-value=45 Score=29.69 Aligned_cols=49 Identities=6% Similarity=0.041 Sum_probs=33.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..++..|.+.+++.+.. .++..++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 147 ETVLVSAA-AGAVGSVVGQIAKLKGCKVVGAAGSD-----------EKIAYLKQIGFDAAF 195 (333)
T ss_dssp CEEEEEST-TBHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEecC-CCcHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCcEEE
Confidence 44554554 47899999999999999766654321 245566888986543
No 312
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=42.41 E-value=1e+02 Score=26.16 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=44.0
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. +. .+++.+++.+.+.+..+++.+-+++... ..+..++.++ . .+|.
T Consensus 24 a~~l~~~G~~V~~~~r~~-~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v---~~~~~~~~~~-g------~id~ 86 (252)
T 3h7a_A 24 AKKFAAEGFTVFAGRRNG-EK------LAPLVAEIEAAGGRIVARSLDARNEDEV---TAFLNAADAH-A------PLEV 86 (252)
T ss_dssp HHHHHHTTCEEEEEESSG-GG------GHHHHHHHHHTTCEEEEEECCTTCHHHH---HHHHHHHHHH-S------CEEE
T ss_pred HHHHHHCCCEEEEEeCCH-HH------HHHHHHHHHhcCCeEEEEECcCCCHHHH---HHHHHHHHhh-C------CceE
Confidence 344555799999987642 11 1344556666565566676665565443 3455666554 3 5899
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
+|...|.+
T Consensus 87 lv~nAg~~ 94 (252)
T 3h7a_A 87 TIFNVGAN 94 (252)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99998854
No 313
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=42.29 E-value=30 Score=31.17 Aligned_cols=48 Identities=19% Similarity=0.028 Sum_probs=33.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHc--CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~--Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+ |.+.+++.+. ..++.+++.+||+.+.
T Consensus 172 ~~VlV~Ga--G~vG~~aiqlak~~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi 221 (344)
T 2h6e_A 172 PVVIVNGI--GGLAVYTIQILKALMKNITIVGISRS-----------KKHRDFALELGADYVS 221 (344)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCTTCEEEEECSC-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHhcCCCEEEEEeCC-----------HHHHHHHHHhCCCEEe
Confidence 45555664 78999999999999 9874443322 1367778889997543
No 314
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=42.26 E-value=1.5e+02 Score=24.76 Aligned_cols=31 Identities=19% Similarity=0.052 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|+++|....+.|.+.+++.+.
T Consensus 10 vlIT-Ga-sggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 10 ALVT-GA-GSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 54 4789999999999999887776543
No 315
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=42.17 E-value=1.3e+02 Score=23.80 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=33.8
Q ss_pred hHHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 021545 139 NLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 218 (311)
Q Consensus 139 n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D 218 (311)
....+...|++|++..+...+.... ....+.+++.|...+.+|.+.+++. ......+..++.++. +. |
T Consensus 32 ~a~~La~~Ga~vvi~~r~~~e~~~~----~~~~~~~~~~G~~~~~i~~Dv~~~~-~~~v~~~~~~i~~~~------G~-d 99 (157)
T 3gxh_A 32 QFSLLKQAGVDVVINLMPDSSKDAH----PDEGKLVTQAGMDYVYIPVDWQNPK-VEDVEAFFAAMDQHK------GK-D 99 (157)
T ss_dssp HHHHHHHTTCCEEEECSCTTSTTSC----TTHHHHHHHTTCEEEECCCCTTSCC-HHHHHHHHHHHHHTT------TS-C
T ss_pred HHHHHHHcCCCEEEECCCccccccc----ccHHHHHHHcCCeEEEecCCCCCCC-HHHHHHHHHHHHhcC------CC-C
Confidence 3445556677766653321110000 0112233444545556776554441 122223444444432 34 7
Q ss_pred eEEEeCCc
Q 021545 219 DIVVACGS 226 (311)
Q Consensus 219 ~ivv~vGt 226 (311)
.+|-+.|+
T Consensus 100 VLVnnAgg 107 (157)
T 3gxh_A 100 VLVHCLAN 107 (157)
T ss_dssp EEEECSBS
T ss_pred EEEECCCC
Confidence 77777764
No 316
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=41.97 E-value=42 Score=30.20 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=33.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..++.. |.+.+++.+.. .++..++.+|++.+.
T Consensus 172 ~~vlV~Ga-gg~iG~~~~~~a~~~~Ga~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 172 KTLLVVGA-GGGLGTMAVQIAKAVSGATIIGVDVRE-----------EAVEAAKRAGADYVI 221 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHHTCCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CccHHHHHHHHHHHcCCCeEEEEcCCH-----------HHHHHHHHhCCCEEe
Confidence 45555554 468999999999999 99855544321 356667788987554
No 317
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=41.93 E-value=1.6e+02 Score=24.90 Aligned_cols=32 Identities=19% Similarity=0.113 Sum_probs=23.4
Q ss_pred EEEEeCCc-cchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s-~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |++ +|.-|+++|....+.|.+++++.+.
T Consensus 11 vlVT-Gas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 11 ALVM-GVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp EEEE-SCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred EEEE-CCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 4555 654 2789999999888889887766543
No 318
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=41.83 E-value=30 Score=31.16 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=34.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCC-cEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl-~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|. +.+++.+. ..++..++.+|++.+.
T Consensus 169 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~-----------~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 169 KSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPS-----------DFRRELAKKVGADYVI 217 (348)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSC-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC-----------HHHHHHHHHhCCCEEE
Confidence 34544554 7899999999999998 66555432 1357778889997543
No 319
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=41.81 E-value=40 Score=30.19 Aligned_cols=49 Identities=6% Similarity=-0.031 Sum_probs=33.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHH-HCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~-~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++ .+|++.+.
T Consensus 157 ~~vlI~Ga-~g~iG~~~~~~a~~~G~~V~~~~~~~-----------~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 157 ETVYVSAA-SGAVGQLVGQLAKMMGCYVVGSAGSK-----------EKVDLLKTKFGFDDAF 206 (345)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTSCCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHHcCCceEE
Confidence 45555554 57899999999999998755554321 3566666 68987543
No 320
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=41.53 E-value=1.5e+02 Score=25.12 Aligned_cols=32 Identities=13% Similarity=0.057 Sum_probs=23.7
Q ss_pred EEEEeCCcc-chHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~-GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+++ |--|+++|....+.|.+++++.+.
T Consensus 12 vlVT-Gas~~~gIG~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 12 ILVT-GVASKLSIAYGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp EEEC-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEE-CCCCCCCHHHHHHHHHHHCCCEEEEEcCc
Confidence 4554 6542 789999999999999987776543
No 321
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=41.29 E-value=40 Score=28.57 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=30.9
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..
T Consensus 105 ~~~gi~~lvi~G-~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 145 (211)
T 3oqp_A 105 AARQIDTLTVTG-YMTHNCDASTINHAVHSGLAVEFLHDATG 145 (211)
T ss_dssp HTTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEe-eccCHHHHHHHHHHHHCCCeEEEechhee
Confidence 457899999886 445555 5788899999999999876543
No 322
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=41.14 E-value=36 Score=30.25 Aligned_cols=49 Identities=14% Similarity=-0.029 Sum_probs=34.2
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+..|.+.+++.+.. .++..++.+|++.+.
T Consensus 142 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 142 EQFLFHAA-AGGVGLIACQWAKALGAKLIGTVGTA-----------QKAQSALKAGAWQVI 190 (327)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCCEEE
Confidence 45555554 47899999999999999766654321 246666778987543
No 323
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=41.10 E-value=31 Score=31.00 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=34.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
++|+..|+ +|.-|++++..++.+|.+.+++.+.. .++..++.+|++.+
T Consensus 168 ~~vlV~Ga-sg~iG~~~~~~a~~~G~~Vi~~~~~~-----------~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 168 DDVLVMAA-GSGVSVAAIQIAKLFGARVIATAGSE-----------DKLRRAKALGADET 215 (343)
T ss_dssp CEEEECST-TSTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCCEE
Confidence 45555554 57899999999999999766654321 35666778898754
No 324
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=41.06 E-value=41 Score=27.82 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=30.0
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++.+-..
T Consensus 109 ~~~gi~~lii~G~-~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (190)
T 3lqy_A 109 DDAGIKKLVIVGA-MTHMAIDAVTRAAEDLGYECAVAHDACA 149 (190)
T ss_dssp HHC-CCEEEEEEE-CTTTHHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEec-CcChHHHHHHHHHHHCCCEEEEechhhc
Confidence 4578999998874 44555 5788889999999999876544
No 325
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=40.65 E-value=59 Score=29.87 Aligned_cols=57 Identities=16% Similarity=0.065 Sum_probs=35.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccch--HHHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN--LLVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n--~~~~~~~GAeV~~v~~~ 156 (311)
++|+|+|- |....++-..|.+.|.++.+|+.+..|. .+|. ...+...|-.+.++.+.
T Consensus 143 ~~ILTh~~--S~tvl~~l~~A~~~gk~~~V~v~EtRP~------~qGrltA~eL~~~GI~vtlI~Ds 201 (338)
T 3a11_A 143 DVIMTHCH--SKAAISVMKTAWEQGKDIKVIVTETRPK------WQGKITAKELASYGIPVIYVVDS 201 (338)
T ss_dssp CEEEECSC--CHHHHHHHHHHHHTTCCCEEEEECCTTT------THHHHHHHHHHHTTCCEEEECGG
T ss_pred CEEEEeCC--cHHHHHHHHHHHHCCCeEEEEEeCCCCc------hhhHHHHHHHHhCCCCEEEEehH
Confidence 56777753 2344455555777888888888887653 2342 22344568888887753
No 326
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=40.61 E-value=93 Score=28.74 Aligned_cols=62 Identities=15% Similarity=0.026 Sum_probs=40.1
Q ss_pred HhHHHHHHHHHH-cCC-----CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEE
Q 021545 77 RKLEFLMADAVA-QGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 150 (311)
Q Consensus 77 Rkl~~ll~~a~~-~G~-----~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV 150 (311)
|+..+.+.++++ .|. ++|+..|. ||-|+.+|..++.+|.+++ +.+... ......+.+|++.
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~GktV~I~G~--GnVG~~~A~~l~~~GakVv-vsD~~~----------~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLTVLVQGL--GAVGGSLASLAAEAGAQLL-VADTDT----------ERVAHAVALGHTA 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEE-EECSCH----------HHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEECc--CHHHHHHHHHHHHCCCEEE-EEeCCc----------cHHHHHHhcCCEE
Confidence 455566666554 343 46666663 9999999999999999887 544321 1133445578764
Q ss_pred E
Q 021545 151 E 151 (311)
Q Consensus 151 ~ 151 (311)
+
T Consensus 222 v 222 (355)
T 1c1d_A 222 V 222 (355)
T ss_dssp C
T ss_pred e
Confidence 4
No 327
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=40.58 E-value=45 Score=30.55 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=34.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcC-CcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~G-l~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| .|.-|++++..|+.+| .+.+++.+.. .++.+++.+||+.+.
T Consensus 197 ~~VlV~G--aG~vG~~aiqlak~~Ga~~Vi~~~~~~-----------~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 197 KTVVIQG--AGPLGLFGVVIARSLGAENVIVIAGSP-----------NRLKLAEEIGADLTL 245 (380)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHHTTBSEEEEEESCH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEEC--cCHHHHHHHHHHHHcCCceEEEEcCCH-----------HHHHHHHHcCCcEEE
Confidence 4566566 4789999999999999 4666655332 367788899997554
No 328
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=40.46 E-value=49 Score=30.99 Aligned_cols=47 Identities=21% Similarity=0.054 Sum_probs=32.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
.+|+..|+ |+.|+++|..++.+|.+.+++ +... .++..++.+|++.+
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~V~v~-D~~~----------~~~~~~~~lGa~~~ 219 (401)
T 1x13_A 173 AKVMVIGA--GVAGLAAIGAANSLGAIVRAF-DTRP----------EVKEQVQSMGAEFL 219 (401)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSCG----------GGHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCEEE
Confidence 45555664 899999999999999864433 3221 24555677899865
No 329
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=40.42 E-value=1.7e+02 Score=24.82 Aligned_cols=31 Identities=19% Similarity=0.108 Sum_probs=22.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
..||| |+ +|--|+++|....+.|.+++++-+
T Consensus 10 ~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 10 VAVVT-GG-SSGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 467899999888888988666644
No 330
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=40.30 E-value=1.9e+02 Score=25.35 Aligned_cols=153 Identities=11% Similarity=0.016 Sum_probs=78.1
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCC-----C-ccc-hH-----HHHHHCC
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDP-----G-LIG-NL-----LVERLVG 147 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~-----~-~~~-n~-----~~~~~~G 147 (311)
..+..+.+++++.||..+... .-++..+++.+ +++++++-...... .+. . ..+ .+ ..+-..|
T Consensus 53 ~~l~~l~~~~~dgIi~~~~~~---~~~~~~~a~~~p~~p~v~id~~~~~~--~~~~~v~~d~~~~~~lag~~a~~l~~~G 127 (318)
T 2fqx_A 53 PSLSAFADENMGLVVACGSFL---VEAVIETSARFPKQKFLVIDAVVQDR--DNVVSAVFGQNEGSFLVGVAAALKAKEA 127 (318)
T ss_dssp HHHHHHHHTTCSEEEEESTTT---HHHHHHHHHHCTTSCEEEESSCCCSC--TTEEEEEECHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECChhH---HHHHHHHHHHCCCCEEEEEcCccCCC--CCEEEEEechHHHHHHHHHHHHHHhccC
Confidence 346777788999998764322 22344445553 88887764321100 010 0 011 11 1233457
Q ss_pred C--EEEEEcCccccccCcHHHHHHHHHHHHHcCCCc--EEecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021545 148 A--HIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 222 (311)
Q Consensus 148 A--eV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~--y~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv 222 (311)
. +|-.+...... ...++.+...+.+++.++.. .++-.+ ..++. .|+ .++.++.++ .+|.||+
T Consensus 128 h~r~Ig~i~g~~~~--~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~a~~ll~~--------~~daI~~ 194 (318)
T 2fqx_A 128 GKSAVGFIVGMELG--MMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQ--KGQ-ALAAKLYDS--------GVNVIFQ 194 (318)
T ss_dssp TCCEEEEEESCCST--TTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHH--HHH-HHHHHHHHT--------TCCEEEE
T ss_pred CCcEEEEEeCcccH--HHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHH--HHH-HHHHHHHHC--------CCcEEEE
Confidence 5 78777542211 12223344444455545432 222222 22332 344 345555442 3899887
Q ss_pred eCCcchhHHHHHHHHhhCC---CCCeEEEEeccC
Q 021545 223 ACGSGGTIAGLSLGSWLGT---LKAKVHAFSVCD 253 (311)
Q Consensus 223 ~vGtGGt~aGl~~~~~~~~---~~~rVigV~~~g 253 (311)
.. +.+..|+..++++.+ .++.|||++-..
T Consensus 195 ~~--d~~a~Gv~~a~~e~g~~P~dv~viG~D~~~ 226 (318)
T 2fqx_A 195 VA--GGTGNGVIKEARDRRLNGQDVWVIGVDRDQ 226 (318)
T ss_dssp EC--GGGHHHHHHHHHHHHHTTCCCEEEEEESCC
T ss_pred CC--CCCchHHHHHHHhhhhccCCcEEEEEecch
Confidence 65 456778888887632 478999998753
No 331
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=40.06 E-value=43 Score=30.40 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=35.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
++|+..| + |.-|++++..|+.+|.+-++.+... ..++.+++.+|++.+.-
T Consensus 192 ~~VlV~G-a-G~vG~~a~qlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 192 SSFVTWG-A-GAVGLSALLAAKVCGASIIIAVDIV----------ESRLELAKQLGATHVIN 241 (371)
T ss_dssp CEEEEES-C-SHHHHHHHHHHHHHTCSEEEEEESC----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEECCC----------HHHHHHHHHcCCCEEec
Confidence 4565566 3 7899999999999999644444322 13677888999986543
No 332
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=39.89 E-value=32 Score=30.75 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=34.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..++..|.+.+++.+.. .++..++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 147 DYVLIHAA-AGGMGHIMVPWARHLGATVIGTVSTE-----------EKAETARKLGCHHTI 195 (333)
T ss_dssp CEEEETTT-TSTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEE
Confidence 45555554 47899999999999999766654331 246667778987544
No 333
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=39.83 E-value=46 Score=27.77 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=30.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..
T Consensus 109 ~~~gi~~lvi~G-~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (198)
T 3mcw_A 109 RANGWLELVVAG-VSTSNSVEATVRMAGNLGFAVCLAEDGCF 149 (198)
T ss_dssp HHHTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HcCCCCeEEEEE-cCcChHHHHHHHHHHHCCCEEEEeCcccc
Confidence 346899999886 445655 5788889999999998876544
No 334
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=39.81 E-value=1.6e+02 Score=24.37 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=42.0
Q ss_pred HHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Q 021545 142 VERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 221 (311)
Q Consensus 142 ~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~iv 221 (311)
.+...|++|+.+.+.. + ..+.+.+++.+.+.+..++..+-+++.. ...+..++.++. +.+|.||
T Consensus 30 ~l~~~G~~V~~~~r~~-~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~------~~~d~vi 93 (255)
T 1fmc_A 30 TFATAGASVVVSDINA-D------AANHVVDEIQQLGGQAFACRCDITSEQE---LSALADFAISKL------GKVDILV 93 (255)
T ss_dssp HHHTTTCEEEEEESCH-H------HHHHHHHHHHHTTCCEEEEECCTTCHHH---HHHHHHHHHHHH------SSCCEEE
T ss_pred HHHHCCCEEEEEcCCH-H------HHHHHHHHHHHhCCceEEEEcCCCCHHH---HHHHHHHHHHhc------CCCCEEE
Confidence 3444699999887632 1 1233445555545455566655455543 334566676665 3599999
Q ss_pred EeCCcc
Q 021545 222 VACGSG 227 (311)
Q Consensus 222 v~vGtG 227 (311)
..+|..
T Consensus 94 ~~Ag~~ 99 (255)
T 1fmc_A 94 NNAGGG 99 (255)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 988864
No 335
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=39.67 E-value=2.1e+02 Score=25.70 Aligned_cols=40 Identities=13% Similarity=-0.258 Sum_probs=28.0
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
.+|.||++.-.+..+..+...++..+.+..+++.....++
T Consensus 219 ~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 258 (419)
T 3h5l_A 219 PPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQYGASLA 258 (419)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEECSGGGSH
T ss_pred CCCEEEEccccCchHHHHHHHHHHcCCCceEEecCCCCcH
Confidence 5899888754455677788888888877777765444333
No 336
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=39.57 E-value=17 Score=34.67 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=26.5
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDD 254 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~ 254 (311)
..+|+|||..|++| +..+.++. .+..+|.-+|..+.
T Consensus 16 ~~yD~IIVGsG~aG----~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAG----SLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHH----HHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHH----HHHHHHHHhCCCCeEEEEcCCCC
Confidence 35899999777654 56666765 47889999998764
No 337
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=39.55 E-value=1.2e+02 Score=27.40 Aligned_cols=83 Identities=11% Similarity=0.096 Sum_probs=49.1
Q ss_pred HHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc----CCCCCccchHHHHHHCCCEEEEEcCccc
Q 021545 83 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV----DQDPGLIGNLLVERLVGAHIELISKEEY 158 (311)
Q Consensus 83 l~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~----~~~~~~~~n~~~~~~~GAeV~~v~~~~~ 158 (311)
-..+.+.|.+.||. ++ . -++..-+..|-.+.+|+|.-.+.- ++. +..+...+...||+++.+++.-|
T Consensus 164 A~~a~~~G~dGvV~-s~-~-----E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~--Rv~t~~~a~~aGAd~iVvGr~I~ 234 (303)
T 3ru6_A 164 SKISYENGLDGMVC-SV-F-----ESKKIKEHTSSNFLTLTPGIRPFGETNDDQK--RVANLAMARENLSDYIVVGRPIY 234 (303)
T ss_dssp HHHHHHTTCSEEEC-CT-T-----THHHHHHHSCTTSEEEECCCCTTC----------CCSHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHcCCCEEEE-CH-H-----HHHHHHHhCCCccEEECCCcCcccCCccccc--ccCCHHHHHHcCCCEEEEChHHh
Confidence 33466778899883 22 1 245555668888899999865421 110 12367677789999999998655
Q ss_pred cccCcHHHHHHHHHHH
Q 021545 159 SKIGSVTLTNILKEKL 174 (311)
Q Consensus 159 ~~~~~~~~~~~~~~~l 174 (311)
...+..+.++++.+++
T Consensus 235 ~a~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 235 KNENPRAVCEKILNKI 250 (303)
T ss_dssp TSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4322223334444333
No 338
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.44 E-value=41 Score=28.19 Aligned_cols=39 Identities=13% Similarity=0.126 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
++..+.++.++|++.|| |+ .-+.-.|+++|++++++..+
T Consensus 131 ~~~~i~~l~~~G~~vvV--G~------~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 131 ITTLISKVKTENIKIVV--SG------KTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHHHHTTCCEEE--EC------HHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHCCCeEEE--CC------HHHHHHHHHcCCcEEEEecC
Confidence 45568888889988877 32 23467788899988887643
No 339
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=39.41 E-value=59 Score=29.41 Aligned_cols=48 Identities=13% Similarity=-0.043 Sum_probs=33.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHH-HCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~-~~GAeV~~ 152 (311)
++|+..| + |--|++++..|+.+|.+.+++.+.. .++..++ .+|++.+.
T Consensus 182 ~~VlV~G-a-G~vG~~a~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 182 LRGGILG-L-GGVGHMGVKIAKAMGHHVTVISSSN-----------KKREEALQDLGADDYV 230 (357)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCEEEEEESST-----------THHHHHHTTSCCSCEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHHHHcCCceee
Confidence 4555456 3 7899999999999999755554322 2455666 89997543
No 340
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=39.31 E-value=1.8e+02 Score=24.80 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=25.1
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
+...||| |+ +|--|.++|..-.+.|.+++++.+..
T Consensus 12 ~k~vlIT-Ga-s~GIG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 12 RRCAVVT-GG-NKGIGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp CCEEEES-SC-SSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEe-cC-CchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3334554 54 46789999999999999887776553
No 341
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=39.22 E-value=1.1e+02 Score=26.00 Aligned_cols=62 Identities=8% Similarity=-0.070 Sum_probs=27.0
Q ss_pred HHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc
Q 021545 83 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE 156 (311)
Q Consensus 83 l~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~ 156 (311)
...|.+.|.+.+| |+++ ...-++..-+..|- +.++.|.-.+. -++.......|++++.+++.
T Consensus 121 a~~a~~~G~~GvV-~sat---~~~e~~~ir~~~~~-f~~v~pGI~~~-------g~~~~~a~~~Gad~iVvGr~ 182 (215)
T 3ve9_A 121 REVARRVNPKGFV-APAT---RPSMISRVKGDFPD-KLVISPGVGTQ-------GAKPGIALCHGADYEIVGRS 182 (215)
T ss_dssp HHHHHHHCCSEEE-CCTT---SHHHHHHHHHHCTT-SEEEECCTTST-------TCCTTHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCcee-eCCC---CHHHHHHHHHhCCC-cEEEcCCCCcC-------cCCHHHHHHcCCCEEEeCHH
Confidence 3444555666665 2221 12233333334454 55555554321 01122233456666666653
No 342
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=39.06 E-value=56 Score=29.64 Aligned_cols=49 Identities=10% Similarity=0.064 Sum_probs=34.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..| + |.-|++++..|+.+|.+-++.+... ..++.+++.+|++.+.
T Consensus 192 ~~VlV~G-a-G~vG~~avqla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 192 SVCAVFG-L-GGVGLAVIMGCKVAGASRIIGVDIN----------KDKFARAKEFGATECI 240 (373)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEECSC----------GGGHHHHHHHTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCC----------HHHHHHHHHcCCceEe
Confidence 4555566 3 7899999999999998544444322 1357778889997543
No 343
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=38.90 E-value=74 Score=28.85 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=32.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHH-HCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~-~~GAeV~~ 152 (311)
++|+..| + |--|++++..|+.+|.+.+++.+.. .++..++ .+|++.+.
T Consensus 189 ~~VlV~G-a-G~vG~~~~q~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 189 KHIGIVG-L-GGLGHVAVKFAKAFGSKVTVISTSP-----------SKKEEALKNFGADSFL 237 (366)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCEEEEEESCG-----------GGHHHHHHTSCCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHhcCCceEE
Confidence 4555456 3 7899999999999999765554332 2354544 89997543
No 344
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=38.86 E-value=2e+02 Score=25.27 Aligned_cols=34 Identities=21% Similarity=-0.002 Sum_probs=25.2
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEe
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 250 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~ 250 (311)
..||.||+ .+...+.|+..++++.+. ++.|+|++
T Consensus 249 ~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 249 PDTDCIFC--VSDMPAFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp TTCCEEEE--SSHHHHHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred CCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 35899886 456778899999888763 66777765
No 345
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=38.63 E-value=1.6e+02 Score=24.16 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=21.7
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
++..|+ +|--|+++|....+.|.+.++..
T Consensus 4 vlVTGa-sggiG~~la~~l~~~G~~v~~~~ 32 (244)
T 1edo_A 4 VVVTGA-SRGIGKAIALSLGKAGCKVLVNY 32 (244)
T ss_dssp EEETTC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 333454 47899999999999998877754
No 346
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=38.50 E-value=55 Score=29.46 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=33.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCC-cEEEEEcCCCcccCCCCCccchHHHHHH-CCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl-~~~ivv~~~~~~~~~~~~~~~n~~~~~~-~GAeV~~ 152 (311)
++|+..|+ +|.-|++++..|+..|. +.+++.+.. .++..++. +|++.+.
T Consensus 162 ~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 162 KTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTH-----------EKCILLTSELGFDAAI 212 (357)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCH-----------HHHHHHHHTSCCSEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCH-----------HHHHHHHHHcCCceEE
Confidence 45555554 58899999999999999 666554321 24566665 8987543
No 347
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=38.25 E-value=49 Score=27.61 Aligned_cols=40 Identities=23% Similarity=0.239 Sum_probs=30.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..
T Consensus 119 ~~~gi~~lvi~G-~~T~~CV~~Ta~da~~~Gy~V~vv~Da~a 159 (197)
T 4h17_A 119 QELGHLDLIVCG-FMSHSSVSTTVRRAKDYGYRCTLVEDASA 159 (197)
T ss_dssp HHHTCSEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhcCCCEEEEEe-eCcCHHHHHHHHHHHHCCCEEEEeCcccc
Confidence 356899999886 455666 5788888999999998876544
No 348
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=37.73 E-value=69 Score=23.00 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=21.8
Q ss_pred EEEEeCCccchHHHHHHHHHHHcC-CcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~G-l~~~ivv~ 124 (311)
+|+..|+ |..|.+++......| .+.+++-+
T Consensus 7 ~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 7 NICVVGA--GKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp EEEEECC--SHHHHHHHHHHHHCSSEEEEEEES
T ss_pred eEEEECC--CHHHHHHHHHHHhCCCceEEEEeC
Confidence 3444564 899999999999999 66555543
No 349
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=37.72 E-value=1.8e+02 Score=24.77 Aligned_cols=72 Identities=14% Similarity=0.072 Sum_probs=43.6
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCC-CcEEecCCCCch-hHHHHHHHHHHHHHHHHhcCCCCCCC
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR-RPYVIPVGGSNS-IGTWGYIEAIKEIEQQLQTGTGGVKF 217 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~-~~y~ip~g~~n~-~~~~Gy~t~a~EI~~Q~~~~~~~~~~ 217 (311)
.+.+...|++|+.+.+.. + ..+++.+++.+.++ +..+++.+-+++ .. ...+..++.++. +.+
T Consensus 29 a~~L~~~G~~V~~~~r~~-~------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~---v~~~~~~~~~~~------g~i 92 (311)
T 3o26_A 29 CKQLSSNGIMVVLTCRDV-T------KGHEAVEKLKNSNHENVVFHQLDVTDPIAT---MSSLADFIKTHF------GKL 92 (311)
T ss_dssp HHHHHHTTCEEEEEESCH-H------HHHHHHHHHHTTTCCSEEEEECCTTSCHHH---HHHHHHHHHHHH------SSC
T ss_pred HHHHHHCCCEEEEEeCCH-H------HHHHHHHHHHhcCCCceEEEEccCCCcHHH---HHHHHHHHHHhC------CCC
Confidence 334455799999987742 1 12344555655432 445566555555 33 234556666665 359
Q ss_pred CeEEEeCCcc
Q 021545 218 DDIVVACGSG 227 (311)
Q Consensus 218 D~ivv~vGtG 227 (311)
|.||..+|..
T Consensus 93 D~lv~nAg~~ 102 (311)
T 3o26_A 93 DILVNNAGVA 102 (311)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCccc
Confidence 9999999975
No 350
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=37.27 E-value=1.9e+02 Score=24.37 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=16.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYL 121 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~i 121 (311)
.||| |+ +|--|+++|....+.|..+.+
T Consensus 5 ~lVT-Ga-s~GIG~aia~~l~~~g~~~~v 31 (254)
T 3kzv_A 5 ILVT-GV-SRGIGKSIVDVLFSLDKDTVV 31 (254)
T ss_dssp EEEC-ST-TSHHHHHHHHHHHHHCSSCEE
T ss_pred EEEE-CC-CchHHHHHHHHHHhcCCCeEE
Confidence 3554 54 467888888777777643333
No 351
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=37.22 E-value=89 Score=25.72 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC-CCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT-SKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~-~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.+.+..+.+.|++.|+........+...+...|+.+|+++.+-+.. .++ ...+..+...|++.+.+..
T Consensus 67 ~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~--------~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 67 HFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDL--------PARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSH--------HHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHHcCCCEEEEcC
Confidence 3457888889999887654332245577788888899988763321 111 1235566678898877653
No 352
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=37.22 E-value=35 Score=30.85 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=24.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
++|+..|| |-.|+.+|.+|+++|++++++-+.
T Consensus 2 K~I~ilGg--g~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGG--KLQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555565 568999999999999999988543
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=37.16 E-value=44 Score=30.46 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=33.8
Q ss_pred EEEEeCCccchHHHHHHHHHHH-cCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~-~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
+|+..|+ .|.-|++++..|+. .|.+.+++.+. ..++.+++.+||+.+.
T Consensus 174 ~VlV~Ga-~G~vG~~a~qlak~~~g~~Vi~~~~~-----------~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 174 AILIVGG-AGGVGSIAVQIARQRTDLTVIATASR-----------PETQEWVKSLGAHHVI 222 (363)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCSEEEEECSS-----------HHHHHHHHHTTCSEEE
T ss_pred EEEEECC-CCHHHHHHHHHHHHhcCCEEEEEeCC-----------HHHHHHHHHcCCCEEE
Confidence 4555553 47899999999998 58776555432 2367788899998665
No 354
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=36.98 E-value=1.8e+02 Score=24.00 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=22.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
+++..|+ +|.-|+++|....+.|.+.+++.+
T Consensus 9 ~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 9 VSLVTGS-TRGIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3333454 578999999988889988777654
No 355
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=36.70 E-value=67 Score=29.09 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=39.7
Q ss_pred CEEEEeCC-ccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~-s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.+|..+|- ..+|.+.+++.+++++ |++++++.|..-.. | ..-+..++..|+++..+.+
T Consensus 152 lkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~----~--~~~~~~~~~~g~~~~~~~d 211 (306)
T 4ekn_B 152 IKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRL----P--KDIIEDLKAKNIKFYEKES 211 (306)
T ss_dssp CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC----C--HHHHHHHHHTTCCEEEESC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCccccc----C--HHHHHHHHHcCCEEEEEcC
Confidence 35555663 3489999999999999 99999999875311 1 1123445667888766543
No 356
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=36.51 E-value=1.9e+02 Score=24.24 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=32.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|....+.|.+++++-+... .-....+.+|.++..+.-
T Consensus 8 ~vlVT-Ga-s~gIG~a~a~~l~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 59 (247)
T 3rwb_A 8 TALVT-GA-AQGIGKAIAARLAADGATVIVSDINAE----------GAKAAAASIGKKARAIAA 59 (247)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEECSCHH----------HHHHHHHHHCTTEEECCC
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCCHH----------HHHHHHHHhCCceEEEEc
Confidence 34555 54 468899999999999998776543321 112233445777776653
No 357
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.50 E-value=1.9e+02 Score=24.26 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=22.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 17 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 17 ALVT-AS-TDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3454 54 4788999999999999887766543
No 358
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=36.45 E-value=1.1e+02 Score=26.11 Aligned_cols=77 Identities=17% Similarity=0.076 Sum_probs=45.8
Q ss_pred cEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccC-----Cc
Q 021545 181 PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCD-----DP 255 (311)
Q Consensus 181 ~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g-----~~ 255 (311)
.||--.|-.|.. -...++.|=.+++ .+++||+++-+|-|+.=++..+ .+.+||.|.=.- ..
T Consensus 18 ~YF~~~G~eNT~---~tl~la~era~e~-------~Ik~iVVAS~sG~TA~k~~e~~----~~i~lVvVTh~~GF~~pg~ 83 (201)
T 1vp8_A 18 VYFNKPGRENTE---ETLRLAVERAKEL-------GIKHLVVASSYGDTAMKALEMA----EGLEVVVVTYHTGFVREGE 83 (201)
T ss_dssp EEESSCSGGGHH---HHHHHHHHHHHHH-------TCCEEEEECSSSHHHHHHHHHC----TTCEEEEEECCTTSSSTTC
T ss_pred EEecCCCcccHH---HHHHHHHHHHHHc-------CCCEEEEEeCCChHHHHHHHHh----cCCeEEEEeCcCCCCCCCC
Confidence 355444544443 3345666666655 3889999999999986555544 457888887321 11
Q ss_pred hhhHHHHHHhHhhhCC
Q 021545 256 DYFYDYTQGLLDGLNA 271 (311)
Q Consensus 256 ~~~~~~i~~~~~g~~~ 271 (311)
..+.+...+.+...|.
T Consensus 84 ~e~~~e~~~~L~~~G~ 99 (201)
T 1vp8_A 84 NTMPPEVEEELRKRGA 99 (201)
T ss_dssp CSSCHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHhCCC
Confidence 1233455556666665
No 359
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=36.41 E-value=46 Score=28.31 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=27.3
Q ss_pred CeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCc
Q 021545 218 DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 255 (311)
Q Consensus 218 D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~ 255 (311)
.++=+++|+|....-++...+..++..+|+||+.....
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR 121 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH
Confidence 35667788887777666654445678899999997654
No 360
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=36.33 E-value=2.1e+02 Score=24.73 Aligned_cols=161 Identities=10% Similarity=-0.008 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcc-----cCCCCCccch---HHHHHHC-CCE-
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLV-GAH- 149 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~-----~~~~~~~~~n---~~~~~~~-GAe- 149 (311)
...+....+++++.||..+ ...+........+...|++++++-...... +..+....+. ..+++.+ |..
T Consensus 52 ~~~i~~l~~~~vdgiIi~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~~G~~~ 130 (325)
T 2x7x_A 52 AEDVHYFMDEGVDLLIISA-NEAAPMTPIVEEAYQKGIPVILVDRKILSDKYTAYIGADNYEIGRSVGNYIASSLKGKGN 130 (325)
T ss_dssp HHHHHHHHHTTCSEEEECC-SSHHHHHHHHHHHHHTTCCEEEESSCCSSSCSSEEEEECHHHHHHHHHHHHHHHTTTEEE
T ss_pred HHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEEecCHHHHHHHHHHHHHHHcCCCce
Confidence 3446666778899998764 333332333444567899987764322110 0000000011 1122322 543
Q ss_pred EEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcch
Q 021545 150 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 228 (311)
Q Consensus 150 V~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 228 (311)
|..+... ... ....+.+...+.+++. +..-+.+....+.....|+ ..+.++.++- ..+|.||+. +..
T Consensus 131 I~~i~~~~~~~--~~~~R~~Gf~~al~~~-pg~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~aI~~~--nd~ 198 (325)
T 2x7x_A 131 IVELTGLSGST--PAMERHQGFMAAISKF-PDIKLIDKADAAWERGPAE-IEMDSMLRRH------PKIDAVYAH--NDR 198 (325)
T ss_dssp EEEEESCTTSH--HHHHHHHHHHHHHHTC-TEEEEEEEEECTTSHHHHH-HHHHHHHHHC------SCCCEEEES--STT
T ss_pred EEEEECCCCCc--cHHHHHHHHHHHHHhC-CCCEEEeeecCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC--CCc
Confidence 4444321 111 0112233344445443 1111111100111112333 2344554432 358999864 456
Q ss_pred hHHHHHHHHhhCCC--CCeEEEEeccC
Q 021545 229 TIAGLSLGSWLGTL--KAKVHAFSVCD 253 (311)
Q Consensus 229 t~aGl~~~~~~~~~--~~rVigV~~~g 253 (311)
.+.|+..++++.+. ++.|+|++-..
T Consensus 199 ~A~g~~~al~~~Gip~dv~vig~D~~~ 225 (325)
T 2x7x_A 199 IAPGAYQAAKMAGREKEMIFVGIDALP 225 (325)
T ss_dssp HHHHHHHHHHHTTCTTSSEEEEEECCC
T ss_pred hHHHHHHHHHHcCCCCCeEEEEECCCc
Confidence 78899999988763 68899998654
No 361
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=36.23 E-value=1.8e+02 Score=23.88 Aligned_cols=29 Identities=14% Similarity=0.056 Sum_probs=21.3
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
++..|+ +|.-|.++|....+.|.+.+++.
T Consensus 4 vlITGa-sggiG~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 4 ALITGA-SRGIGRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp EEETTT-TSHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEeCC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 333454 57899999998888898776663
No 362
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=36.03 E-value=1.7e+02 Score=25.22 Aligned_cols=53 Identities=9% Similarity=0.013 Sum_probs=31.8
Q ss_pred eEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCC-----chhhHHHHHHhHhhhCC
Q 021545 219 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD-----PDYFYDYTQGLLDGLNA 271 (311)
Q Consensus 219 ~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~-----~~~~~~~i~~~~~g~~~ 271 (311)
.-++++++|.|..+++..+........+..|...|. ..+...-..+|++.++.
T Consensus 57 ~~viGla~G~T~~~~~~~l~~~~~~~~v~~v~L~ggl~~~~~~~~~~~~~~la~~~~~ 114 (255)
T 2okg_A 57 KNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASG 114 (255)
T ss_dssp EEEEEECCSHHHHHHHHHCCCCTTCCEEEEEESEEECC---CCHHHHHHHHHHHHHTC
T ss_pred CCEEEECCcHHHHHHHHhhccccCCCCCEEEECCCCCCCCcccCHHHHHHHHHHHHCC
Confidence 457889999999999999865312234444444432 11222234556777665
No 363
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=35.89 E-value=2.1e+02 Score=24.48 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=23.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
..+|| |+ +|--|.++|......|.+++++.+.
T Consensus 30 ~vlIT-Ga-sggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 30 KVIVT-GA-SKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp EEEES-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 34554 54 4788999999999999887776553
No 364
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=35.86 E-value=2.1e+02 Score=24.56 Aligned_cols=30 Identities=33% Similarity=0.188 Sum_probs=20.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|--|+++|....+.|.+++++-
T Consensus 30 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~ 59 (272)
T 4dyv_A 30 IAIVT-GA-GSGVGRAVAVALAGAGYGVALAG 59 (272)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEE
Confidence 33454 54 46788888888888888765553
No 365
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=35.25 E-value=73 Score=28.03 Aligned_cols=64 Identities=16% Similarity=0.034 Sum_probs=39.0
Q ss_pred hhHHhHHHHHHHHHHc-C----CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCC
Q 021545 74 NKVRKLEFLMADAVAQ-G----ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGA 148 (311)
Q Consensus 74 nK~Rkl~~ll~~a~~~-G----~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GA 148 (311)
|-.-.+++.+..+++. + -++|...|. |+-|+++|..++.+|++.+++-+.. .+....+.+|+
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~dr~~-----------~~~~~~~~~g~ 199 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGL--GRVGMSVARKFAALGAKVKVGARES-----------DLLARIAEMGM 199 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTS
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEee--CHHHHHHHHHHHhCCCEEEEEECCH-----------HHHHHHHHCCC
Confidence 4444455555554432 2 145655664 8999999999999999766554321 12334456787
Q ss_pred EE
Q 021545 149 HI 150 (311)
Q Consensus 149 eV 150 (311)
++
T Consensus 200 ~~ 201 (293)
T 3d4o_A 200 EP 201 (293)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 366
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=35.21 E-value=53 Score=25.97 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.1
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
|+..|| |-.|..+|...+++|++++++-+..
T Consensus 4 vvIIGg--G~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 4 VIVVGG--GPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred EEEECC--CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 444565 7899999999999999999887543
No 367
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=34.53 E-value=40 Score=28.37 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=25.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
+.+| .|+ |..|..+|...++.|++++++-+.
T Consensus 5 dVvV-VGg--G~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 5 QVLI-VGA--GFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp SEEE-ECC--SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCCEEEEecC
Confidence 4344 565 889999999999999999988654
No 368
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=34.34 E-value=1.3e+02 Score=26.10 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=27.0
Q ss_pred CCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 71 LSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 71 ~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
+|+.+-=+. .+.....++|++.++ ++ .....+..++......|.+++.+.
T Consensus 15 TGas~GIG~-aia~~la~~Ga~Vvi-~~-~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 15 TGSARGLGF-AYAEGLAAAGARVIL-ND-IRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp TTCSSHHHH-HHHHHHHHTTCEEEE-CC-SCHHHHHHHHHHHHHTTCCEEECC
T ss_pred eCCCcHHHH-HHHHHHHHCCCEEEE-EE-CCHHHHHHHHHHHHhcCCcEEEEE
Confidence 455532222 233334467776444 33 344455566666777788877654
No 369
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.19 E-value=2.1e+02 Score=24.04 Aligned_cols=71 Identities=13% Similarity=0.057 Sum_probs=0.0
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
...+...|++|+.+.+.. +..+.+.+++.+.+.+..+++.+-+++..... +..++.++.. +.+|.
T Consensus 26 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~~~~~~~~-----g~id~ 90 (260)
T 2ae2_A 26 VEELASLGASVYTCSRNQ-------KELNDCLTQWRSKGFKVEASVCDLSSRSERQE---LMNTVANHFH-----GKLNI 90 (260)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH---HHHHHHHHTT-----TCCCE
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH---HHHHHHHHcC-----CCCCE
Q ss_pred EEEeCC
Q 021545 220 IVVACG 225 (311)
Q Consensus 220 ivv~vG 225 (311)
+|...|
T Consensus 91 lv~~Ag 96 (260)
T 2ae2_A 91 LVNNAG 96 (260)
T ss_dssp EEECCC
T ss_pred EEECCC
No 370
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=34.19 E-value=61 Score=27.64 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=30.7
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+.|+++||.+| ...|.| .++|.-|..+|++++++.+-..
T Consensus 147 ~~~gi~~lii~G-~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 187 (226)
T 3kl2_A 147 RSKGVDTIVLGG-FLTNCCVESTMRTGYERGFRVITLTDCVA 187 (226)
T ss_dssp HHHTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred hCCCCCcEEEec-cCcchHHHHHHHHHHHCCCEEEEechhhc
Confidence 356899999886 445655 5788888999999998876544
No 371
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=34.03 E-value=2.2e+02 Score=25.92 Aligned_cols=91 Identities=15% Similarity=0.147 Sum_probs=45.4
Q ss_pred CCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCc--EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 147 GAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 147 GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~--y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
|-++..+.+.... ....+++.+.+.+. -.. +++|.+-.|+. . ....++++++.+. +..=..+++++
T Consensus 34 ~~k~liVtd~~v~----~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~-~----~~v~~~~~~~~~~--~~~r~d~iIal 101 (368)
T 2gru_A 34 FDQYIMISDSGVP----DSIVHYAAEYFGKL-APVHILRFQGGEEYKT-L----STVTNLQERAIAL--GANRRTAIVAV 101 (368)
T ss_dssp CSEEEEEEETTSC----HHHHHHHHHHHTTT-SCEEEEEECCSGGGCS-H----HHHHHHHHHHHHT--TCCTTEEEEEE
T ss_pred CCEEEEEECCcHH----HHHHHHHHHHHHhc-cceeEEEeCCCCCCCC-H----HHHHHHHHHHHhc--CCCCCcEEEEE
Confidence 4466555432211 11334455555432 122 45666544442 1 2334555555431 11114677888
Q ss_pred Ccchh--HHHHHHHHhhCCCCCeEEEEec
Q 021545 225 GSGGT--IAGLSLGSWLGTLKAKVHAFSV 251 (311)
Q Consensus 225 GtGGt--~aGl~~~~~~~~~~~rVigV~~ 251 (311)
|+|.. ++|.+.+.+. ..+++|.|..
T Consensus 102 GGGsv~D~ak~~Aa~~~--rgip~i~IPT 128 (368)
T 2gru_A 102 GGGLTGNVAGVAAGMMF--RGIALIHVPT 128 (368)
T ss_dssp ESHHHHHHHHHHHHHBT--TCCEEEEEEC
T ss_pred CChHHHHHHHHHHHHhc--CCCCEEEECC
Confidence 88766 5666655432 4577888777
No 372
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=33.98 E-value=61 Score=29.60 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCCCCCCC--eEEEeCCcchh--HHHHHHHHhhCCCCCeEEEEeccC
Q 021545 200 AIKEIEQQLQTGTGGVKFD--DIVVACGSGGT--IAGLSLGSWLGTLKAKVHAFSVCD 253 (311)
Q Consensus 200 ~a~EI~~Q~~~~~~~~~~D--~ivv~vGtGGt--~aGl~~~~~~~~~~~rVigV~~~g 253 (311)
...++.+++.+ ..+| .+++++|+|.. ++|.+.... .+.+++|.|..--
T Consensus 75 ~v~~~~~~~~~----~~~~r~d~iIavGGGsv~D~ak~vA~~~--~rgip~i~IPTT~ 126 (354)
T 1xah_A 75 QYQETLEYILS----HHVTRNTAIIAVGGGATGDFAGFVAATL--LRGVHFIQVPTTI 126 (354)
T ss_dssp HHHHHHHHHHT----TCCCTTCEEEEEESHHHHHHHHHHHHHB--TTCCEEEEEECST
T ss_pred HHHHHHHHHHH----cCCCCCceEEEECChHHHHHHHHHHHHh--ccCCCEEEECCcc
Confidence 34455565553 2343 67778887765 555555443 3567888887753
No 373
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=33.90 E-value=1.1e+02 Score=27.95 Aligned_cols=157 Identities=10% Similarity=-0.021 Sum_probs=71.7
Q ss_pred HHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCc--------ccCCCCCccch--HHHHHHCCCE-EE
Q 021545 83 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV--------LVDQDPGLIGN--LLVERLVGAH-IE 151 (311)
Q Consensus 83 l~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~--------~~~~~~~~~~n--~~~~~~~GAe-V~ 151 (311)
+....+++++.||... . + ..+...+...|++++++-..... .+..+....+. ...+...|.+ +.
T Consensus 69 i~~l~~~~vDGiIi~~--~-~--~~~~~~l~~~~iPvV~i~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~r~I~ 143 (412)
T 4fe7_A 69 IDKIKDWLGDGVIADF--D-D--KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 143 (412)
T ss_dssp ------CCCSEEEEET--T-C--HHHHHHHTTCCSCEEEEEECCSSGGGSCSSEEEEECHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhHhcCCCCEEEEec--C-C--hHHHHHHhhCCCCEEEecCCccccccCCCCCEEEeCHHHHHHHHHHHHHHcCCceEE
Confidence 4445567788888631 1 1 23344556679998877543211 00000000011 1223335653 55
Q ss_pred EEcCcccccc-CcHHHHHHHHHHHHHcCCCcEEecCCCCch-hHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchh
Q 021545 152 LISKEEYSKI-GSVTLTNILKEKLLKEGRRPYVIPVGGSNS-IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 229 (311)
Q Consensus 152 ~v~~~~~~~~-~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~-~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt 229 (311)
.+........ ...++.+...+.+++.+....++....... ....++ ....++.++. .++|.||+. +...
T Consensus 144 ~i~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~aI~~~--nD~~ 214 (412)
T 4fe7_A 144 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQ-NRLADWLQTL------PPQTGIIAV--TDAR 214 (412)
T ss_dssp EECCCTTSCCHHHHHHHHHHHHHHTTSSSCCEEECCSCSSCSSHHHHH-HHHHHHHHHS------CTTEEEEES--SHHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHcCCCccccccccccccchhhHH-HHHHHHHHhC------CCCeEEEEE--ecHH
Confidence 5543211100 012233444445555443333333221111 111333 2333444332 468998864 5677
Q ss_pred HHHHHHHHhhCCC----CCeEEEEeccC
Q 021545 230 IAGLSLGSWLGTL----KAKVHAFSVCD 253 (311)
Q Consensus 230 ~aGl~~~~~~~~~----~~rVigV~~~g 253 (311)
+.|+..++++.+. ++.|+|++-..
T Consensus 215 A~g~~~al~~~G~~vP~disvig~D~~~ 242 (412)
T 4fe7_A 215 ARHILQVCEHLHIPVPEKLCVIGIDNEE 242 (412)
T ss_dssp HHHHHHHHHHHTCCTTTTSEEEESSCCS
T ss_pred HHHHHHHHHHcCCCCCceEEEEeecchh
Confidence 8899999988663 68899987543
No 374
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=33.71 E-value=2.2e+02 Score=24.21 Aligned_cols=52 Identities=13% Similarity=0.011 Sum_probs=33.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|....+.|.+++++-+... .-....+.+|.++..+.-
T Consensus 29 ~vlVT-Ga-s~gIG~aia~~la~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 80 (266)
T 3grp_A 29 KALVT-GA-TGGIGEAIARCFHAQGAIVGLHGTRED----------KLKEIAADLGKDVFVFSA 80 (266)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEEEESCHH----------HHHHHHHHHCSSEEEEEC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCCHH----------HHHHHHHHhCCceEEEEe
Confidence 34554 54 467899999999999998777654321 112234556877766653
No 375
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=33.68 E-value=74 Score=30.85 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=32.7
Q ss_pred CEEEEeCCccchHH-HHHH--HHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 92 DCIITIGGIQSNHC-RAAA--VAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 92 ~~vVt~g~s~GNhg-~AlA--~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
+-+|.|| . ||.| -+++ ..-+..|+++.+|+.... . ++....++...+.+|..+.
T Consensus 54 ~v~VlcG-~-GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~---~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCG-G-GNNGGDGFVVARNLLGVVKDVLVVFLGKK-K---TPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEEC-S-SHHHHHHHHHHHHHTTTSSEEEEEECCSS-C---CHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEEC-C-CCCHHHHHHHHHHHHHCCCeEEEEEECCC-C---CHHHHHHHHHHHhCCCcee
Confidence 3455665 3 5554 4444 445557999999987653 1 1112346777888887765
No 376
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=33.66 E-value=3.1e+02 Score=25.78 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=53.0
Q ss_pred EEEEeCCccchHHHHHHHHHHH-cCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCccccccCcHHHHHHHH
Q 021545 93 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILK 171 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~-~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~ 171 (311)
.||| |++ +.-|+|+|...+. .|.+++++-....... . ..| ...|.. .+.+.
T Consensus 50 aLVT-Gas-~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~--------~-----~~~-------~~gwyn------~~~~~ 101 (405)
T 3zu3_A 50 VLVI-GAS-TGYGLAARITAAFGCGADTLGVFFERPGEE--------G-----KPG-------TSGWYN------SAAFH 101 (405)
T ss_dssp EEEE-SCS-SHHHHHHHHHHHHHHCCEEEEEECCCCCBT--------T-----BCC-------CHHHHH------HHHHH
T ss_pred EEEe-Ccc-hHHHHHHHHHHHHhcCCEEEEEeCCchhhh--------h-----hcc-------cccchh------HHHHH
Confidence 3454 544 6788999888888 8988776644322100 0 000 011211 01122
Q ss_pred HHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 172 EKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 172 ~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
+.+++.+.....+..+-+++.. ...+..++.+.+ +.+|.+|-..|.+
T Consensus 102 ~~~~~~G~~a~~i~~Dvtd~~~---v~~~v~~i~~~~------G~IDiLVNNAG~~ 148 (405)
T 3zu3_A 102 KFAAQKGLYAKSINGDAFSDEI---KQLTIDAIKQDL------GQVDQVIYSLASP 148 (405)
T ss_dssp HHHHHTTCCEEEEESCTTSHHH---HHHHHHHHHHHT------SCEEEEEECCCCS
T ss_pred HHHHhcCCceEEEECCCCCHHH---HHHHHHHHHHHc------CCCCEEEEcCccc
Confidence 2344445555556555455543 334666777665 4689999988874
No 377
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=33.60 E-value=21 Score=35.33 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=26.6
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g 253 (311)
..+|+|||..|++ |++.+.++. .+..+|.-+|..+
T Consensus 18 ~~yDyIIVGgG~A----G~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLT----GLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHH----HHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHH----HHHHHHHHHhCCCCcEEEEecCC
Confidence 3589999976654 566667765 5789999999887
No 378
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=33.59 E-value=2.1e+02 Score=23.95 Aligned_cols=12 Identities=8% Similarity=0.027 Sum_probs=8.8
Q ss_pred CCCeEEEEeccC
Q 021545 242 LKAKVHAFSVCD 253 (311)
Q Consensus 242 ~~~rVigV~~~g 253 (311)
..++|..|.|..
T Consensus 185 ~gi~v~~v~Pg~ 196 (260)
T 2zat_A 185 RNIRVNCLAPGL 196 (260)
T ss_dssp GTEEEEEEEECS
T ss_pred cCeEEEEEEECc
Confidence 368888888764
No 379
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=33.38 E-value=2.1e+02 Score=24.10 Aligned_cols=30 Identities=23% Similarity=0.083 Sum_probs=21.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
..||| |+ +|--|+++|....+.|.+++++-
T Consensus 10 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 10 SALIT-GS-ARGIGRAFAEAYVREGATVAIAD 39 (259)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEe
Confidence 34555 54 47889999998889998866653
No 380
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=32.95 E-value=1.2e+02 Score=25.79 Aligned_cols=17 Identities=0% Similarity=-0.046 Sum_probs=11.3
Q ss_pred HHHHHHHHHcCCcEEEE
Q 021545 106 RAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 106 ~AlA~~a~~~Gl~~~iv 122 (311)
..+|..++..|+.-+++
T Consensus 125 ~~~a~~a~~~g~~GvV~ 141 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVV 141 (222)
T ss_dssp HHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 56777777778665443
No 381
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=32.83 E-value=80 Score=29.22 Aligned_cols=77 Identities=16% Similarity=0.042 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhH--HHHHHHHhhC----
Q 021545 167 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI--AGLSLGSWLG---- 240 (311)
Q Consensus 167 ~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~--aGl~~~~~~~---- 240 (311)
.+++.+.|++.+-...+++....||.- ....|+.+++.+ ..+| +|+++|+|..+ ++.+......
T Consensus 48 ~~~v~~~L~~~gi~~~~~~~v~~~p~~-----~~v~~~~~~~~~----~~~D-~IIavGGGsv~D~aK~ia~~~~~~~~~ 117 (383)
T 3ox4_A 48 VKQVADLLKAQGINSAVYDGVMPNPTV-----TAVLEGLKILKD----NNSD-FVISLGGGSPHDCAKAIALVATNGGEV 117 (383)
T ss_dssp HHHHHHHHHTTTCEEEEEEEECSSCBH-----HHHHHHHHHHHH----HTCS-EEEEEESHHHHHHHHHHHHHHHSCSSG
T ss_pred HHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-EEEEeCCcHHHHHHHHHHHHHhCCCCH
Confidence 355566676654333233322334431 223344444432 2366 56889988763 4444443311
Q ss_pred ----------CCCCeEEEEeccC
Q 021545 241 ----------TLKAKVHAFSVCD 253 (311)
Q Consensus 241 ----------~~~~rVigV~~~g 253 (311)
.+..++|.|..--
T Consensus 118 ~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 118 KDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp GGGCEESCCSSCCSCEEEEECSS
T ss_pred HHHhcccccccCCCCEEEEeCCC
Confidence 2356788887654
No 382
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=32.73 E-value=53 Score=26.43 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=29.3
Q ss_pred HHcCCCEEEEeCCccchHH-HHHHHHHHHcCCcEEEEEcCC
Q 021545 87 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 87 ~~~G~~~vVt~g~s~GNhg-~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
.+.|.++||.+| ...|.| .++|.-|..+|++++++.+-.
T Consensus 97 ~~~gi~~lvv~G-~~T~~CV~~Ta~da~~~Gy~v~v~~Da~ 136 (167)
T 2a67_A 97 TEQAVQTLEIAG-VQTEFCVDTTIRMAHGLGYTCLMTPKTT 136 (167)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEECTTCE
T ss_pred HHCCCCEEEEEe-cccChHHHHHHHHHHHCCCEEEEechhh
Confidence 357899999886 455666 478888888999988776544
No 383
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=32.33 E-value=1.3e+02 Score=24.98 Aligned_cols=55 Identities=15% Similarity=-0.026 Sum_probs=35.8
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.||| |++ |--|+++|....+.|.+.+++....... .......++..|.++..+.-
T Consensus 10 vlIT-Gas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 64 (255)
T 3icc_A 10 ALVT-GAS-RGIGRAIAKRLANDGALVAIHYGNRKEE------AEETVYEIQSNGGSAFSIGA 64 (255)
T ss_dssp EEET-TCS-SHHHHHHHHHHHHTTCEEEEEESSCSHH------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEE-CCC-ChHHHHHHHHHHHCCCeEEEEeCCchHH------HHHHHHHHHhcCCceEEEec
Confidence 3454 544 6789999999999999888765544321 01234455667888776654
No 384
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=32.22 E-value=1.2e+02 Score=26.60 Aligned_cols=87 Identities=10% Similarity=0.047 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCC--ccchHHHHHHCCCEEEEEcCccc
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG--LIGNLLVERLVGAHIELISKEEY 158 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~--~~~n~~~~~~~GAeV~~v~~~~~ 158 (311)
.+-..+.+.|++.||+ + ..-++..=+..|-.+.+|+|.-.+.-...-+ +.-+...+...||+++.+++.-|
T Consensus 148 ~~A~~a~~~G~dGvV~--s-----~~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~ 220 (259)
T 3tfx_A 148 SLAKMAKHSGADGVIC--S-----PLEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPIT 220 (259)
T ss_dssp HHHHHHHHTTCCEEEC--C-----GGGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHhCCCEEEE--C-----HHHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHh
Confidence 3445566779999993 2 1334555556788888999986542100000 11246667789999999998655
Q ss_pred cccCcHHHHHHHHHHH
Q 021545 159 SKIGSVTLTNILKEKL 174 (311)
Q Consensus 159 ~~~~~~~~~~~~~~~l 174 (311)
...+..+.++++.+++
T Consensus 221 ~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 221 LASDPKAAYEAIKKEF 236 (259)
T ss_dssp TSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4323233334444443
No 385
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=32.04 E-value=67 Score=28.95 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=31.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
++|+..|+ |.-|++++..|+.+|.+.++++.... .++.+++.++.+++.
T Consensus 181 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~l~~~~~~ 229 (363)
T 3m6i_A 181 DPVLICGA--GPIGLITMLCAKAAGACPLVITDIDE----------GRLKFAKEICPEVVT 229 (363)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEEESCH----------HHHHHHHHHCTTCEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCH----------HHHHHHHHhchhccc
Confidence 34444553 78999999999999998555543321 356667777445443
No 386
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=31.98 E-value=89 Score=27.54 Aligned_cols=31 Identities=13% Similarity=0.025 Sum_probs=24.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
++|...|. |+.|+++|..++.+|++.+++-+
T Consensus 158 ~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGL--GRTGMTIARTFAALGANVKVGAR 188 (300)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcc--cHHHHHHHHHHHHCCCEEEEEEC
Confidence 45655664 89999999999999997666543
No 387
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=31.95 E-value=2.3e+02 Score=23.74 Aligned_cols=69 Identities=13% Similarity=0.026 Sum_probs=41.7
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. + ..+++.+++ +.+..++..+-+++.. ...+..++.++. +.+|.
T Consensus 23 a~~l~~~G~~V~~~~r~~-~------~~~~~~~~~---~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~------g~id~ 83 (247)
T 3rwb_A 23 AARLAADGATVIVSDINA-E------GAKAAAASI---GKKARAIAADISDPGS---VKALFAEIQALT------GGIDI 83 (247)
T ss_dssp HHHHHHTTCEEEEECSCH-H------HHHHHHHHH---CTTEEECCCCTTCHHH---HHHHHHHHHHHH------SCCSE
T ss_pred HHHHHHCCCEEEEEeCCH-H------HHHHHHHHh---CCceEEEEcCCCCHHH---HHHHHHHHHHHC------CCCCE
Confidence 344556799999887642 1 123333333 4455666665555543 334666777665 36999
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
+|...|..
T Consensus 84 lv~nAg~~ 91 (247)
T 3rwb_A 84 LVNNASIV 91 (247)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99988853
No 388
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=31.59 E-value=83 Score=26.58 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=33.1
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|....+.|.+++++-+.... -....+.++.++..+.-
T Consensus 11 ~vlIT-Ga-s~gIG~~~a~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~ 62 (261)
T 3n74_A 11 VALIT-GA-GSGFGEGMAKRFAKGGAKVVIVDRDKAG----------AERVAGEIGDAALAVAA 62 (261)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHHHCTTEEEEEC
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCHHH----------HHHHHHHhCCceEEEEe
Confidence 34555 54 4788999999999999997776543221 12233455777766543
No 389
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=31.58 E-value=2.4e+02 Score=23.98 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=33.6
Q ss_pred EEEEeCCccchHHHHHHHHHHHcC-CcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~G-l~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
+|+..|+ +|+-|.+++......| .+++++.+.... .....+...|.+++..
T Consensus 7 ~ilVtGa-tG~iG~~l~~~L~~~g~~~V~~~~R~~~~---------~~~~~l~~~~~~~~~~ 58 (299)
T 2wm3_A 7 LVVVFGG-TGAQGGSVARTLLEDGTFKVRVVTRNPRK---------KAAKELRLQGAEVVQG 58 (299)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHHCSSEEEEEESCTTS---------HHHHHHHHTTCEEEEC
T ss_pred EEEEECC-CchHHHHHHHHHHhcCCceEEEEEcCCCC---------HHHHHHHHCCCEEEEe
Confidence 3444454 5899999999888888 898888765321 1223344567777654
No 390
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=31.52 E-value=2.9e+02 Score=24.79 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=25.6
Q ss_pred HHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEE
Q 021545 85 DAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCY 120 (311)
Q Consensus 85 ~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ 120 (311)
+.+++++..|| |...+....+++-.+...+++.+
T Consensus 64 ~li~~~V~aii--G~~~S~~~~a~~~i~~~~~iP~I 97 (389)
T 3o21_A 64 SQFSRGVYAIF--GFYDQMSMNTLTSFCGALHTSFV 97 (389)
T ss_dssp HHHTTTCSCEE--ECCCTTTHHHHHHHHHHHTCCEE
T ss_pred HHHhcCcEEEE--eCCChhHHHHHHHHhccCCCcee
Confidence 34455766666 55667788899999999999876
No 391
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=31.17 E-value=1.1e+02 Score=26.61 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=25.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
.+|| |+ +|+-|.+++......|.+++++.+..
T Consensus 14 ilVt-Ga-tG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 14 ILIF-GG-TGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp EEEE-TT-TSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCcEEEEECCC
Confidence 3454 54 58999999999999999998888764
No 392
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=31.09 E-value=74 Score=24.42 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=21.4
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
.++|...|+ |+.|.++|...+..|.+ +.+.
T Consensus 21 ~~~v~iiG~--G~iG~~~a~~l~~~g~~-v~v~ 50 (144)
T 3oj0_A 21 GNKILLVGN--GMLASEIAPYFSYPQYK-VTVA 50 (144)
T ss_dssp CCEEEEECC--SHHHHHHGGGCCTTTCE-EEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCE-EEEE
Confidence 455655664 89999998888888887 4443
No 393
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=30.89 E-value=73 Score=29.84 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=35.0
Q ss_pred CCCeEEEeCC-cchhHHHHHHH----HhhCCCCCeEEEEeccCCchhhHHH---HHHhHhhhCC-CCCCCCeEEeccCCc
Q 021545 216 KFDDIVVACG-SGGTIAGLSLG----SWLGTLKAKVHAFSVCDDPDYFYDY---TQGLLDGLNA-GVDSRDIVNIQNVSV 286 (311)
Q Consensus 216 ~~D~ivv~vG-tGGt~aGl~~~----~~~~~~~~rVigV~~~g~~~~~~~~---i~~~~~g~~~-~~~~~dvv~v~e~~~ 286 (311)
..|.||+.+| +|||=+|.+-. .|+. ...+++|.......-.... ..+-+..+.. ...+|-+|.|++.+.
T Consensus 111 ~~d~vfi~ag~GGGTGtGa~pvia~~~ke~--~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l 188 (389)
T 4ei7_A 111 DRDFIWITCGLGGGTGTGALLKAIEMLYEH--DYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKL 188 (389)
T ss_dssp TCSEEEEEEETTSSHHHHHHHHHHHHHHHT--TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHH
T ss_pred CccEEEEEecCCCCCccccHHHHHHHHHHc--CCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHH
Confidence 4788877766 56665665443 3444 3456666655433222211 1222223321 123677888887643
No 394
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=30.84 E-value=2e+02 Score=24.94 Aligned_cols=49 Identities=8% Similarity=0.089 Sum_probs=29.4
Q ss_pred EEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCCc-----hhh-HHHHHHhHhhhCC
Q 021545 221 VVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDP-----DYF-YDYTQGLLDGLNA 271 (311)
Q Consensus 221 vv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~~-----~~~-~~~i~~~~~g~~~ 271 (311)
++++++|.|..+++..+... .++++++ ...|.. ... ..-..+|.+.++.
T Consensus 60 viGla~G~T~~~~~~~l~~~~~~~v~~v--~L~ggl~~~~~~~~~~~~~~~la~~~~~ 115 (266)
T 2gnp_A 60 KIGFSWGKSLSNLVDLIHSKSVRNVHFY--PLAGGPSHIHAKYHVNTLIYEMSRKFHG 115 (266)
T ss_dssp EEEECCSHHHHHHHHHCCCCCCSSCEEE--ESBCCCTTSCGGGSHHHHHHHHHHHHTC
T ss_pred EEEECChHHHHHHHHhccccCCCCCEEE--ECCCCCCCCccccCHHHHHHHHHHHhCC
Confidence 57889999999999998653 2445554 444431 122 2223456666665
No 395
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=30.72 E-value=1.4e+02 Score=27.11 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=28.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
+|..+|-. +|.+++++.+++++|++++++.|..-
T Consensus 157 ~va~vGD~-~rva~Sl~~~~~~~g~~v~~~~P~~~ 190 (315)
T 1pvv_A 157 KVVYVGDG-NNVAHSLMIAGTKLGADVVVATPEGY 190 (315)
T ss_dssp EEEEESCC-CHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred EEEEECCC-cchHHHHHHHHHHCCCEEEEECCccc
Confidence 45556643 89999999999999999999998764
No 396
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=30.66 E-value=2.7e+02 Score=24.20 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=26.6
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
..||.||+ .+...+.|+..++++.+. ++.|+|++-
T Consensus 238 ~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvvgfD~ 276 (339)
T 3h5o_A 238 PDCDALFC--CNDDLAIGALARSQQLGIAVPERLAIAGFND 276 (339)
T ss_dssp TTCCEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CCCcEEEE--CChHHHHHHHHHHHHcCCCCCCCEEEEEECC
Confidence 35899886 456778899999988763 577888763
No 397
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=30.54 E-value=2.4e+02 Score=26.11 Aligned_cols=60 Identities=17% Similarity=0.024 Sum_probs=37.9
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccc-hHHHHHHCCCEEEE
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIG-NLLVERLVGAHIEL 152 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~-n~~~~~~~GAeV~~ 152 (311)
..+|+..|+ |+.|.-+|...+++|.+++++.+........++.... -...++..|.+++.
T Consensus 147 ~~~vvViGg--G~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~ 207 (437)
T 4eqs_A 147 VDKVLVVGA--GYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRL 207 (437)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEE
T ss_pred CcEEEEECC--ccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEe
Confidence 356666675 8999999999999999999998665321111111111 13345566766543
No 398
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=30.44 E-value=2.5e+02 Score=23.77 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=26.1
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
..+|.||+. +...+.|+..++++.+. ++.|+|++-
T Consensus 196 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~ 234 (301)
T 3miz_A 196 DRPTAIMSG--NDEMAIQIYIAAMALGLRIPQDVSIVGFDD 234 (301)
T ss_dssp TCCSEEEES--SHHHHHHHHHHHHTTTCCHHHHCEEECSBC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCCeeEEEeCC
Confidence 468998874 55678899999998875 466777763
No 399
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=30.38 E-value=2.4e+02 Score=23.62 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=22.6
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 10 AVVT-AG-SSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3555 54 478999999999999988776654
No 400
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=30.35 E-value=2.5e+02 Score=23.84 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=41.5
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. + ..+++.+++ +.+..++..+-+++.. ...+..++.++.. .+|.
T Consensus 44 a~~la~~G~~V~~~~r~~-~------~~~~~~~~~---~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g------~iD~ 104 (266)
T 3grp_A 44 ARCFHAQGAIVGLHGTRE-D------KLKEIAADL---GKDVFVFSANLSDRKS---IKQLAEVAEREME------GIDI 104 (266)
T ss_dssp HHHHHHTTCEEEEEESCH-H------HHHHHHHHH---CSSEEEEECCTTSHHH---HHHHHHHHHHHHT------SCCE
T ss_pred HHHHHHCCCEEEEEeCCH-H------HHHHHHHHh---CCceEEEEeecCCHHH---HHHHHHHHHHHcC------CCCE
Confidence 334555799998887631 1 123333222 4456667665555543 3346667777663 5999
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
||..+|..
T Consensus 105 lvnnAg~~ 112 (266)
T 3grp_A 105 LVNNAGIT 112 (266)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999865
No 401
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=30.33 E-value=1.3e+02 Score=26.25 Aligned_cols=33 Identities=18% Similarity=0.124 Sum_probs=20.8
Q ss_pred cCCCEEEEeCCccchHHHHHHHHHHHcCC---cEEEEE
Q 021545 89 QGADCIITIGGIQSNHCRAAAVAAKYLNL---DCYLIL 123 (311)
Q Consensus 89 ~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl---~~~ivv 123 (311)
+|...||| |+ +|--|+++|....+.|. +++++-
T Consensus 32 ~~k~~lVT-Ga-s~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 32 AKKTVLIT-GA-SAGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp TTCEEEEE-ST-TSHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEe-cC-CChHHHHHHHHHHHcCCCCceEEEEE
Confidence 34445665 54 46788888877777776 555443
No 402
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=30.26 E-value=2.7e+02 Score=24.07 Aligned_cols=159 Identities=9% Similarity=-0.018 Sum_probs=76.1
Q ss_pred HHHHHHHHcC--CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCc------------ccCCCCCccch---HHHH
Q 021545 81 FLMADAVAQG--ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV------------LVDQDPGLIGN---LLVE 143 (311)
Q Consensus 81 ~ll~~a~~~G--~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~------------~~~~~~~~~~n---~~~~ 143 (311)
..+..+.+++ ++.||..+. ..+........++..|++++++-..... .+..+....+. ..+.
T Consensus 52 ~~i~~l~~~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~ 130 (332)
T 2rjo_A 52 ADIRALLQKTGGNLVLNVDPN-DSADARVIVEACSKAGAYVTTIWNKPKDLHPWDYNPNYVAHLSYDGVAYGEETATQLF 130 (332)
T ss_dssp HHHHHHHHHTTTCEEEEECCS-SHHHHHHHHHHHHHHTCEEEEESCCCTTCCGGGGTTTEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEEeCC-CHHHHHHHHHHHHHCCCeEEEECCCCCcccchhcccceeEEEccChHHHHHHHHHHHH
Confidence 4466666778 898886543 2232223344456679998776432111 00000000011 1122
Q ss_pred HH-CCCE-EEEEcCc-cccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021545 144 RL-VGAH-IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 220 (311)
Q Consensus 144 ~~-~GAe-V~~v~~~-~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~i 220 (311)
+. .|.+ |..+... ... ....+.+...+.+++. +..-+.+....+.....|+ ..+.+++++.. ..+|.|
T Consensus 131 ~~~~G~~~I~~i~g~~~~~--~~~~R~~Gf~~al~~~-pgi~~~~~~~~~~~~~~~~-~~~~~ll~~~~-----~~~~aI 201 (332)
T 2rjo_A 131 KSMGGKGGVVALGGIFSNV--PAIERKAGLDAALKKF-PGIQLLDFQVADWNSQKAF-PIMQAWMTRFN-----SKIKGV 201 (332)
T ss_dssp HHTTTCEEEEEEECCTTCH--HHHHHHHHHHHHHHTC-TTEEEEEEEECTTCHHHHH-HHHHHHHHHHG-----GGEEEE
T ss_pred HHcCCCCeEEEEECCCCCc--cHHHHHHHHHHHHHhC-CCcEEEeeccCCCCHHHHH-HHHHHHHHhcC-----CCeeEE
Confidence 32 4654 5455321 111 1112334444455543 1211111100111122343 34456655411 248888
Q ss_pred EEeCCcchhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 221 VVACGSGGTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 221 vv~vGtGGt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
|+ .+..++.|+..++++.+. ++.|+|++-
T Consensus 202 ~~--~nd~~A~g~~~al~~~G~~~di~vvg~D~ 232 (332)
T 2rjo_A 202 WA--ANDDMALGAIEALRAEGLAGQIPVTGMDG 232 (332)
T ss_dssp EE--SSHHHHHHHHHHHHHTTCBTTBCEECSBC
T ss_pred EE--CCCchHHHHHHHHHHcCCCCCCEEEeecC
Confidence 86 456788999999998775 678887764
No 403
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=30.15 E-value=1.6e+02 Score=24.76 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=26.6
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEecc
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~ 252 (311)
++|.||+ .+...+.|+..++++.+. ++.|+|++-.
T Consensus 178 ~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~d~~ 216 (277)
T 3hs3_A 178 QFDAIIT--VNDLYAAEIIKEAKRRNLKIPDDFQLVGYDNN 216 (277)
T ss_dssp GCSEEEC--SSHHHHHHHHHHHHHTTCCTTTTCEEECSBCC
T ss_pred CCCEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeeCCc
Confidence 5899886 456778899999998774 6778877643
No 404
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=30.13 E-value=1.7e+02 Score=25.83 Aligned_cols=50 Identities=18% Similarity=0.186 Sum_probs=30.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHH-cCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~-~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
++|+..|+ |--|...+..++. .|.+.+.+.+. ..++.+.+.+||+.+.-.
T Consensus 165 ~~VlV~Ga--G~~g~~a~~~a~~~~g~~Vi~~~~~-----------~~r~~~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 165 DWQVIFGA--GGLGNLAIQYAKNVFGAKVIAVDIN-----------QDKLNLAKKIGADVTINS 215 (348)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTSCCEEEEEESC-----------HHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcC--CCccHHHHHHHHHhCCCEEEEEECc-----------HHHhhhhhhcCCeEEEeC
Confidence 55555564 4455555666665 46665555432 236888999999876543
No 405
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=30.04 E-value=2.4e+02 Score=23.50 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=42.1
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. + ..+++.+++ +.+..+++.+-+++.. ...+..++.++.. .+|.
T Consensus 26 a~~l~~~G~~V~~~~r~~-~------~~~~~~~~~---~~~~~~~~~D~~~~~~---~~~~~~~~~~~~g------~id~ 86 (261)
T 3n74_A 26 AKRFAKGGAKVVIVDRDK-A------GAERVAGEI---GDAALAVAADISKEAD---VDAAVEAALSKFG------KVDI 86 (261)
T ss_dssp HHHHHHTTCEEEEEESCH-H------HHHHHHHHH---CTTEEEEECCTTSHHH---HHHHHHHHHHHHS------CCCE
T ss_pred HHHHHHCCCEEEEEcCCH-H------HHHHHHHHh---CCceEEEEecCCCHHH---HHHHHHHHHHhcC------CCCE
Confidence 334455799999987642 1 123333333 3345566665555543 3456677777763 5999
Q ss_pred EEEeCCcch
Q 021545 220 IVVACGSGG 228 (311)
Q Consensus 220 ivv~vGtGG 228 (311)
+|..+|.+.
T Consensus 87 li~~Ag~~~ 95 (261)
T 3n74_A 87 LVNNAGIGH 95 (261)
T ss_dssp EEECCCCCC
T ss_pred EEECCccCC
Confidence 999998643
No 406
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=29.88 E-value=75 Score=27.74 Aligned_cols=33 Identities=9% Similarity=-0.149 Sum_probs=26.2
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhCCCCCeEEEEecc
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVC 252 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~ 252 (311)
.+|.||+. ++.+..|+..++++.+ +.|||++-.
T Consensus 181 ~~daI~~~--~D~~a~Gv~~a~~e~G--v~viG~D~~ 213 (296)
T 2hqb_A 181 QVDVFYPA--GDGYHVPVVEAIKDQG--DFAIGYVGD 213 (296)
T ss_dssp TCCEEECC--CTTTHHHHHHHHHHHT--CEEEEEESC
T ss_pred CCcEEEEC--CCCCCHHHHHHHHHcC--CEEEEEecc
Confidence 38988864 5567789999998876 899999873
No 407
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=29.85 E-value=90 Score=26.70 Aligned_cols=12 Identities=0% Similarity=-0.100 Sum_probs=9.0
Q ss_pred CCCeEEEEeccC
Q 021545 242 LKAKVHAFSVCD 253 (311)
Q Consensus 242 ~~~rVigV~~~g 253 (311)
..++|..|.|..
T Consensus 192 ~gI~vn~v~PG~ 203 (266)
T 4egf_A 192 HGIRANSVCPTV 203 (266)
T ss_dssp GTEEEEEEEESC
T ss_pred hCeEEEEEEeCC
Confidence 368888888764
No 408
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=29.71 E-value=1.7e+02 Score=27.47 Aligned_cols=55 Identities=4% Similarity=-0.103 Sum_probs=35.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHc------C---------CcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~------G---------l~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.+++.|||.+|...-+|+.-+.+ | -+.+++++.... ......++..|++++.++-
T Consensus 148 g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H--------~s~~~~~~~~g~~~~~v~~ 217 (481)
T 4e1o_A 148 GVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAH--------SSVEKAGLISLVKMKFLPV 217 (481)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred eEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcch--------HHHHHHHHhCCCceEEEEc
Confidence 47788888888865554433211 1 246778776542 2345556778999999974
No 409
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=29.69 E-value=85 Score=29.37 Aligned_cols=48 Identities=19% Similarity=-0.005 Sum_probs=34.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 152 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~ 152 (311)
.+|+..|+ |..|..+|..++.+|.+.+++ +... .++..++.+|++.+.
T Consensus 185 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~lGa~~~~ 232 (381)
T 3p2y_A 185 ASALVLGV--GVAGLQALATAKRLGAKTTGY-DVRP----------EVAEQVRSVGAQWLD 232 (381)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHHTCEEEEE-CSSG----------GGHHHHHHTTCEECC
T ss_pred CEEEEECc--hHHHHHHHHHHHHCCCEEEEE-eCCH----------HHHHHHHHcCCeEEe
Confidence 35555665 899999999999999975544 3221 356677789998654
No 410
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=29.63 E-value=94 Score=28.26 Aligned_cols=57 Identities=12% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchH--HHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNL--LVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~--~~~~~~GAeV~~v~~~ 156 (311)
++|+|+|.| -...++-..|++.|.++.+++.+..|. .+|.. ..+...|-.+.++.+.
T Consensus 123 ~~ILTh~~S--~tv~~~l~~A~~~gk~~~V~v~EsrP~------~qG~~la~~L~~~gI~vtli~Ds 181 (315)
T 3ecs_A 123 ATILTHAYS--RVVLRVLEAAVAAKKRFSVYVTESQPD------LSGKKMAKALCHLNVPVTVVLDA 181 (315)
T ss_dssp EEEEECSCC--HHHHHHHHHHHTTTCCEEEEEECCTTT------THHHHHHHHHHTTTCCEEEECGG
T ss_pred CEEEEcCCc--HHHHHHHHHHHHcCCeEEEEEecCCCc------chHHHHHHHHHHcCCCEEEEehh
Confidence 567787532 355555556667899999999887653 13332 3445568888888753
No 411
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.56 E-value=53 Score=29.43 Aligned_cols=28 Identities=11% Similarity=0.043 Sum_probs=23.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
+|+..|+ |=.|.++|..-++.|++++||
T Consensus 3 ~V~IVGa--GpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 3 HVGIIGA--GIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECc--CHHHHHHHHHHHhCCCCEEEE
Confidence 3555565 778999999999999998887
No 412
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=29.40 E-value=79 Score=30.62 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=32.0
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 150 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV 150 (311)
++|+..|. |+-|..+|..++.+|.+++++-+. ..+....+.+|+++
T Consensus 275 ktV~IiG~--G~IG~~~A~~lka~Ga~Viv~d~~-----------~~~~~~A~~~Ga~~ 320 (494)
T 3ce6_A 275 KKVLICGY--GDVGKGCAEAMKGQGARVSVTEID-----------PINALQAMMEGFDV 320 (494)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSC-----------HHHHHHHHHTTCEE
T ss_pred CEEEEEcc--CHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHcCCEE
Confidence 56666664 999999999999999865544221 12455667788864
No 413
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=29.35 E-value=2.7e+02 Score=23.88 Aligned_cols=15 Identities=7% Similarity=-0.290 Sum_probs=11.6
Q ss_pred hCCCCCeEEEEeccC
Q 021545 239 LGTLKAKVHAFSVCD 253 (311)
Q Consensus 239 ~~~~~~rVigV~~~g 253 (311)
++++++||-+|.|.-
T Consensus 163 ela~~IrVN~I~PG~ 177 (247)
T 3ged_A 163 SLGPDVLVNCIAPGW 177 (247)
T ss_dssp HHTTTSEEEEEEECS
T ss_pred HHCCCCEEEEEecCc
Confidence 356789999998864
No 414
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=29.33 E-value=1.1e+02 Score=26.66 Aligned_cols=54 Identities=7% Similarity=-0.047 Sum_probs=30.6
Q ss_pred EEEEeCCccchHH---HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEE
Q 021545 93 CIITIGGIQSNHC---RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 151 (311)
Q Consensus 93 ~vVt~g~s~GNhg---~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~ 151 (311)
-+|.|| . ||.| ..+|..-+..|+++.+|++... .. ++....++...+.+|..+.
T Consensus 61 v~VlcG-~-GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~~--~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 61 VFVIAG-P-GNNGGDGLVCARHLKLFGYNPVVFYPKRS-ER--TEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp EEEEEC-S-SHHHHHHHHHHHHHHHTTCCEEEECCCCC-TT--CHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEC-C-CCCHHHHHHHHHHHHHCCCeEEEEEcCCC-CC--CHHHHHHHHHHHHcCCcEE
Confidence 345665 4 5554 4555555668999999876532 11 1112334666677786653
No 415
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=29.33 E-value=3e+02 Score=25.80 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=26.5
Q ss_pred HHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcc
Q 021545 175 LKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 227 (311)
Q Consensus 175 ~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 227 (311)
.+.+.....++.+-+++... ..+..++.++. +.+|.+|-.+|.+
T Consensus 119 ~~~g~~~~~~~~Dvtd~~~v---~~~v~~i~~~~------G~IDiLVnNAG~~ 162 (418)
T 4eue_A 119 KKKGLVAKNFIEDAFSNETK---DKVIKYIKDEF------GKIDLFVYSLAAP 162 (418)
T ss_dssp HHTTCCEEEEESCTTCHHHH---HHHHHHHHHTT------CCEEEEEECCCCS
T ss_pred HHcCCcEEEEEeeCCCHHHH---HHHHHHHHHHc------CCCCEEEECCccc
Confidence 33354555566554555433 34556666654 4689999888875
No 416
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=29.10 E-value=46 Score=28.77 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=22.2
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
||..|| |=.|.+.|..++++|+++++|=
T Consensus 7 vvIIG~--GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 7 VVIIGS--GPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEe
Confidence 333465 6789999999999999988873
No 417
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=29.05 E-value=2.5e+02 Score=23.38 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=20.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
.||| |+ +|--|+++|....+.|.+++++
T Consensus 5 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~ 32 (247)
T 3dii_A 5 VIVT-GG-GHGIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEE-ST-TSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEE
Confidence 3555 54 3678899998888888876665
No 418
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=29.01 E-value=1.8e+02 Score=26.79 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=29.8
Q ss_pred EEEeCCccchHHHHHHHHHHHc--CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~--Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
++|.| ++.+..+++.+-.. . +.+++- ... .......++..|++++.++-
T Consensus 101 ~~t~G---~~~al~~~~~~l~~~~~-d~Vlv~-~P~--------y~~~~~~~~~~g~~~~~v~~ 151 (405)
T 3k7y_A 101 IQCIG---GTGAIFVLLEFLKMLNV-ETLYVT-NPP--------YINHVNMIESRGFNLKYINF 151 (405)
T ss_dssp EEEEH---HHHHHHHHHHHHHTTTC-CEEEEE-SSC--------CHHHHHHHHTTTCEEEEECC
T ss_pred EEcCc---hHHHHHHHHHHHHhcCC-CEEEEe-CCC--------CHhHHHHHHHcCCeEEEEec
Confidence 56655 45666666554443 5 555443 221 23457788999999998863
No 419
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=29.01 E-value=3e+02 Score=24.26 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=74.2
Q ss_pred HHHHHH-cCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCccc--CCCC-------C--c--cchHHHHHHCCC
Q 021545 83 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV--DQDP-------G--L--IGNLLVERLVGA 148 (311)
Q Consensus 83 l~~a~~-~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~--~~~~-------~--~--~~n~~~~~~~GA 148 (311)
+.+.++ .+++.|| |..++....+++-.|...+++.+.+........ ...+ . . ..-...+..+|.
T Consensus 65 ~~~li~~~~v~aii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 142 (387)
T 3i45_A 65 AQELLTRHGVHALA--GTFLSHVGLAVSDFARQRKVLFMASEPLTDALTWEKGNRYTYRLRPSTYMQAAMLAAEAAKLPI 142 (387)
T ss_dssp HHHHHHHHCCSEEE--ECCSHHHHHHHHHHHHHHTCCEEECSCCCGGGTTTTCCTTEEECSCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHhcCCEEEE--CCcchHHHHHHHHHHHHcCceEEecCCCchhhhhccCCCCEEEeCCChHHHHHHHHHHHHHcCC
Confidence 334444 4888777 445566778888999999999876543221100 0011 0 0 011223333565
Q ss_pred E-EEEEcC-ccccccCcHHHHHHHHHHHHHcCCCcEE-----ecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Q 021545 149 H-IELISK-EEYSKIGSVTLTNILKEKLLKEGRRPYV-----IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 221 (311)
Q Consensus 149 e-V~~v~~-~~~~~~~~~~~~~~~~~~l~~~g~~~y~-----ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~iv 221 (311)
+ |..+.. ..|. ....+.+.+.+++.+...-+ ++.+..+ +.....+|.+ ..+|.||
T Consensus 143 ~~vaii~~~~~~g----~~~~~~~~~~l~~~~~g~~vv~~~~~~~~~~d------~~~~~~~i~~--------~~~d~v~ 204 (387)
T 3i45_A 143 TRWATIAPNYEYG----QSAVARFKELLLAARPEVTFVAEQWPALYKLD------AGPTVQALQQ--------AEPEGLF 204 (387)
T ss_dssp CEEEEECCSSHHH----HHHHHHHHHHHHHHCTTCEEEEEECCCTTCCC------HHHHHHHHHH--------TCCSEEE
T ss_pred CeEEEEeCCchHh----HHHHHHHHHHHHHhCCCcEEEeeecCCCCCcC------HHHHHHHHHh--------CCCCEEE
Confidence 4 544432 2232 12234445555554211111 2222211 2223333322 2588888
Q ss_pred EeCCcchhHHHHHHHHhhCCC--CCeEEEEec
Q 021545 222 VACGSGGTIAGLSLGSWLGTL--KAKVHAFSV 251 (311)
Q Consensus 222 v~vGtGGt~aGl~~~~~~~~~--~~rVigV~~ 251 (311)
+.+ .+..+.++...++..+. +..|++...
T Consensus 205 ~~~-~~~~~~~~~~~~~~~g~~~~~~i~~~~~ 235 (387)
T 3i45_A 205 NVL-FGADLPKFVREGRVRGLFAGRQVVSMLT 235 (387)
T ss_dssp ECC-CTTHHHHHHHHHHHHTSSTTCEEEEEEE
T ss_pred EcC-ccHHHHHHHHHHHHcCCCCCCeEEeecC
Confidence 754 55677888888877663 577777643
No 420
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=28.97 E-value=1.1e+02 Score=26.52 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=38.4
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
|...||| |+ ++--|+++|..-++.|.++++.-+... ......++..|.++..+.-
T Consensus 9 GKvalVT-Ga-s~GIG~aiA~~la~~Ga~Vvi~~r~~~---------~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVT-GA-NTGLGQAIAVGLAAAGAEVVCAARRAP---------DETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEET-TT-TSHHHHHHHHHHHHTTCEEEEEESSCC---------HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEe-Cc-CCHHHHHHHHHHHHcCCEEEEEeCCcH---------HHHHHHHHHhCCcEEEEEc
Confidence 4445665 54 467899999999999999877654321 1346678888988766643
No 421
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.94 E-value=2.5e+02 Score=23.31 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHCCCEEEEEcC-ccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 021545 140 LLVERLVGAHIELISK-EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 218 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~-~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D 218 (311)
...+...|++|+.+.+ .. ...+.+.+.+.+.+.+..++..+-+++..... +..++.++. +.+|
T Consensus 24 a~~l~~~G~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~---~~~~~~~~~------g~id 87 (261)
T 1gee_A 24 AIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGGEAIAVKGDVTVESDVIN---LVQSAIKEF------GKLD 87 (261)
T ss_dssp HHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH---HHHHHHHHH------SCCC
T ss_pred HHHHHHCCCEEEEEcCCCh-------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHH---HHHHHHHHc------CCCC
Q ss_pred eEEEeCC
Q 021545 219 DIVVACG 225 (311)
Q Consensus 219 ~ivv~vG 225 (311)
.||..+|
T Consensus 88 ~li~~Ag 94 (261)
T 1gee_A 88 VMINNAG 94 (261)
T ss_dssp EEEECCC
T ss_pred EEEECCC
No 422
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=28.89 E-value=28 Score=34.34 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDD 254 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~ 254 (311)
..+|+|||..|++| ++.+.++. .++.+|.-+|..+.
T Consensus 5 ~~yDyIVVGgG~AG----~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAG----NTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHH----HHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHH----HHHHHHHHhCCCCcEEEEecCCC
Confidence 45899999766654 55566553 45689999998876
No 423
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.77 E-value=2.8e+02 Score=23.76 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. +.+.+...+.+.+..+++.+-+++..... +..++.++. +.+|.
T Consensus 44 a~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~---~~~~~~~~~------g~iD~ 104 (277)
T 4dqx_A 44 AELFAKNGAYVVVADVNE----------DAAVRVANEIGSKAFGVRVDVSSAKDAES---MVEKTTAKW------GRVDV 104 (277)
T ss_dssp HHHHHHTTCEEEEEESSH----------HHHHHHHHHHCTTEEEEECCTTCHHHHHH---HHHHHHHHH------SCCCE
T ss_pred HHHHHHCCCEEEEEeCCH----------HHHHHHHHHhCCceEEEEecCCCHHHHHH---HHHHHHHHc------CCCCE
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
+|..+|.+
T Consensus 105 lv~nAg~~ 112 (277)
T 4dqx_A 105 LVNNAGFG 112 (277)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
No 424
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.43 E-value=68 Score=27.61 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=24.0
Q ss_pred HHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 79 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 79 l~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
++..+.++.++|++.|| |+ .-+.-.|+++|++++++.
T Consensus 143 ~~~~i~~l~~~G~~vVV--G~------~~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 143 ARGQINELKANGTEAVV--GA------GLITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHTTCCEEE--ES------HHHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHCCCCEEE--CC------HHHHHHHHHcCCcEEEEC
Confidence 44567777777877766 32 234566777887777765
No 425
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.39 E-value=1.3e+02 Score=25.87 Aligned_cols=12 Identities=8% Similarity=-0.050 Sum_probs=9.2
Q ss_pred CCCeEEEEeccC
Q 021545 242 LKAKVHAFSVCD 253 (311)
Q Consensus 242 ~~~rVigV~~~g 253 (311)
..++|..|.|..
T Consensus 196 ~gI~vn~v~PG~ 207 (271)
T 4ibo_A 196 YGIQANAIGPGY 207 (271)
T ss_dssp GTEEEEEEEECS
T ss_pred hCeEEEEEEecc
Confidence 468999988864
No 426
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=28.32 E-value=2.8e+02 Score=23.73 Aligned_cols=34 Identities=18% Similarity=0.005 Sum_probs=24.6
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 29 gk~vlVT-Ga-s~gIG~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVT-GA-GAGIGLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEET-TT-TSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334554 54 4779999999999999988777543
No 427
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=28.23 E-value=1e+02 Score=28.01 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=38.5
Q ss_pred EEEEeCCc-cchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGI-QSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s-~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
+|..+|-. .+|.+++++.+++++ |++++++.|+.-.. + ..-+..++..|+++..+.
T Consensus 156 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~----~--~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAM----P--QYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC----C--HHHHHHHHHTTCCEEECS
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCccccc----C--HHHHHHHHHcCCeEEEEc
Confidence 45555632 479999999999999 99999999876421 0 112345566787765554
No 428
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=28.20 E-value=60 Score=28.56 Aligned_cols=30 Identities=20% Similarity=0.020 Sum_probs=23.7
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
||..|| |=.|.++|+.+++.|++++++=..
T Consensus 7 vvIIG~--G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 7 CIVIGA--GVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444565 788999999999999998887543
No 429
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=28.19 E-value=72 Score=29.16 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=25.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
++|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 13 ~~IlIlG~--G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGG--GQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEECC
Confidence 34554565 678999999999999999888654
No 430
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=28.17 E-value=2.8e+02 Score=23.71 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=41.8
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. + ..+.+.+++ +.+..++..+-+++.. ...+..++.++.+ .+|.
T Consensus 46 a~~la~~G~~V~~~~r~~-~------~~~~~~~~~---~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g------~iD~ 106 (277)
T 3gvc_A 46 ARRLADEGCHVLCADIDG-D------AADAAATKI---GCGAAACRVDVSDEQQ---IIAMVDACVAAFG------GVDK 106 (277)
T ss_dssp HHHHHHTTCEEEEEESSH-H------HHHHHHHHH---CSSCEEEECCTTCHHH---HHHHHHHHHHHHS------SCCE
T ss_pred HHHHHHCCCEEEEEeCCH-H------HHHHHHHHc---CCcceEEEecCCCHHH---HHHHHHHHHHHcC------CCCE
Confidence 344555799999887632 1 123333333 4455666665555543 3346677777763 5999
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
+|...|..
T Consensus 107 lvnnAg~~ 114 (277)
T 3gvc_A 107 LVANAGVV 114 (277)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99998864
No 431
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=28.13 E-value=2.6e+02 Score=23.85 Aligned_cols=68 Identities=13% Similarity=0.057 Sum_probs=40.3
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. + ..+++.+. .+.+..++..+-+++.. ...+..++.++. +.+|.
T Consensus 22 a~~la~~G~~V~~~~r~~-~------~~~~~~~~---~~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~------g~iD~ 82 (281)
T 3zv4_A 22 VDRFVAEGARVAVLDKSA-E------RLRELEVA---HGGNAVGVVGDVRSLQD---QKRAAERCLAAF------GKIDT 82 (281)
T ss_dssp HHHHHHTTCEEEEEESCH-H------HHHHHHHH---TBTTEEEEECCTTCHHH---HHHHHHHHHHHH------SCCCE
T ss_pred HHHHHHCcCEEEEEeCCH-H------HHHHHHHH---cCCcEEEEEcCCCCHHH---HHHHHHHHHHhc------CCCCE
Confidence 344555799999987632 1 12222222 23355566655555543 345667777765 36999
Q ss_pred EEEeCCc
Q 021545 220 IVVACGS 226 (311)
Q Consensus 220 ivv~vGt 226 (311)
+|...|.
T Consensus 83 lvnnAg~ 89 (281)
T 3zv4_A 83 LIPNAGI 89 (281)
T ss_dssp EECCCCC
T ss_pred EEECCCc
Confidence 9999885
No 432
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=28.09 E-value=1.3e+02 Score=26.50 Aligned_cols=57 Identities=25% Similarity=0.120 Sum_probs=38.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchH--HHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNL--LVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~--~~~~~~GAeV~~v~~~ 156 (311)
++|+|++. |-+..++...++..|.++++|+.+..|. .+|.. ..+...|-++.++.+.
T Consensus 111 ~~IlT~~~--s~Tv~~~l~~a~~~~~~~~V~v~etrP~------~qG~~~a~~L~~~gI~vtli~ds 169 (276)
T 1vb5_A 111 DVIITHSF--SSTVLEIIRTAKERKKRFKVILTESSPD------YEGLHLARELEFSGIEFEVITDA 169 (276)
T ss_dssp EEEECCSC--CHHHHHHHHHHHHTTCCEEEEEECCTTT------THHHHHHHHHHHTTCCEEEECGG
T ss_pred CEEEEeCC--ChHHHHHHHHHHHcCCeEEEEEeCCCcc------hhhHHHHHHHHHCCCCEEEEcHH
Confidence 56777764 3467777888888899999999877653 23322 2333379999988853
No 433
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=28.01 E-value=55 Score=29.61 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=22.8
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
||..|+ |=.|.++|+.+++.|++++++=.
T Consensus 7 VvIIGa--G~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 7 VVVVGG--GPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHHCCCeEEEEeC
Confidence 343565 78999999999999999777643
No 434
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=27.99 E-value=56 Score=28.99 Aligned_cols=29 Identities=28% Similarity=0.373 Sum_probs=22.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
|.+| .|| |=.|.++|...++.|++++++=
T Consensus 6 DViI-VGa--GpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 6 DVLV-VGG--GPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCcEEEEe
Confidence 3344 454 6789999999999999988873
No 435
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=27.98 E-value=1.4e+02 Score=27.99 Aligned_cols=55 Identities=13% Similarity=-0.045 Sum_probs=35.1
Q ss_pred EEEEeCCccchHHHHHHHHHHHc------C---------CcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~------G---------l~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
.+++.|||.+|+..-+++.-+.+ | =+.+++++.... ......++..|++++.++-
T Consensus 142 gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H--------~s~~~~~~~~g~~~~~v~~ 211 (475)
T 3k40_A 142 GVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH--------SSVERAGLLGGVKLRSVQS 211 (475)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred eEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch--------HHHHHHHHHcCCceEEEEC
Confidence 57788888888765544422211 1 136777776542 2345667789999999875
No 436
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=27.97 E-value=2.5e+02 Score=23.06 Aligned_cols=31 Identities=19% Similarity=0.037 Sum_probs=22.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
+++..|+ +|.-|.++|..-.+.|.+++++.+
T Consensus 8 ~vlVtGa-sggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 8 VAIITGG-TLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 578999999888888988776654
No 437
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=27.89 E-value=58 Score=28.31 Aligned_cols=28 Identities=39% Similarity=0.388 Sum_probs=22.3
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
|-|| .|| |=.|.+.|..++++|+++++|
T Consensus 8 DvvI-IG~--GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 8 DIAI-IGA--GPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 3344 464 678999999999999999888
No 438
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=27.79 E-value=2.7e+02 Score=24.27 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=26.9
Q ss_pred CCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEecc
Q 021545 217 FDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 252 (311)
Q Consensus 217 ~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~ 252 (311)
||.||+ .+...+.|+..++++.+. ++.|+|++-.
T Consensus 232 ~~ai~~--~nd~~A~g~~~al~~~G~~vP~disvig~D~~ 269 (333)
T 3jvd_A 232 PDALIV--ASPRLMAGVMRAFTRLNVRVPHDVVIGGYDDP 269 (333)
T ss_dssp CSEEEE--CCHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEEECCh
Confidence 899987 456778899999998774 6789998744
No 439
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=27.79 E-value=1e+02 Score=30.02 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=37.4
Q ss_pred HhHHHHHHHHHHcCCC----EEEEeCCccc--hHHHHHHHHHHHcCCc---EEEEEcCCC
Q 021545 77 RKLEFLMADAVAQGAD----CIITIGGIQS--NHCRAAAVAAKYLNLD---CYLILRTSK 127 (311)
Q Consensus 77 Rkl~~ll~~a~~~G~~----~vVt~g~s~G--Nhg~AlA~~a~~~Gl~---~~ivv~~~~ 127 (311)
-.+..++..+.+.|.. .+++-||..| +|..++.-.|++.|++ .|+|++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~H~~gl~sdggvhsh~~hl~~l~~~a~~~g~~~v~~H~~~dGrD 154 (511)
T 1o98_A 95 ETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRD 154 (511)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCCEEEEEEECSSS
T ss_pred HHHHHHHHHHHhcCCeEEEEEeccCCCCccHHHHHHHHHHHHHHCCCCeEEEEEEccCCC
Confidence 3455667777765532 3556666655 9999999999999996 588998764
No 440
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=27.77 E-value=1.4e+02 Score=27.28 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=37.8
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHH----HHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLL----VERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~----~~~~~GAeV~~v~ 154 (311)
+|..+|-..+|.+.+++.+++++|++++++.|..-.. . ..-+. ..+..|+++..+.
T Consensus 157 ~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p---~---~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 157 TLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWP---E---AALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCC---C---HHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCC---C---HHHHHHHHHHHHHcCCeEEEEE
Confidence 5555664347999999999999999999999876421 0 01112 2236788877654
No 441
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=27.77 E-value=3.3e+02 Score=24.36 Aligned_cols=14 Identities=14% Similarity=-0.197 Sum_probs=10.5
Q ss_pred CCCCCeEEEEeccC
Q 021545 240 GTLKAKVHAFSVCD 253 (311)
Q Consensus 240 ~~~~~rVigV~~~g 253 (311)
+...++|..|.+..
T Consensus 221 ~~~gIrvn~v~PG~ 234 (346)
T 3kvo_A 221 FKGEIAVNALWPKT 234 (346)
T ss_dssp TTTTCEEEEEECSB
T ss_pred hcCCcEEEEEeCCC
Confidence 34679999998863
No 442
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=27.64 E-value=3.5e+02 Score=24.53 Aligned_cols=150 Identities=13% Similarity=-0.086 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCCcccCCCC-Cc-cchHHHHHHC---------C
Q 021545 80 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDP-GL-IGNLLVERLV---------G 147 (311)
Q Consensus 80 ~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~~~~~~~~-~~-~~n~~~~~~~---------G 147 (311)
+..+..+.++|++-||+.| ..+.-++.-+|.++ +++++++- ..... ++- .. ..+.....+. -
T Consensus 76 ~~~l~~l~~~g~d~Ii~~g---~~~~~~~~~vA~~~Pdv~fv~id-~~~~~--~Nv~sv~~~~~eg~ylaG~~A~~~tk~ 149 (356)
T 3s99_A 76 ERSIKRIARAGNKLIFTTS---FGYMDPTVKVAKKFPDVKFEHAT-GYKTA--DNMSAYNARFYEGRYVQGVIAAKMSKK 149 (356)
T ss_dssp HHHHHHHHHTTCSEEEECS---GGGHHHHHHHHTTCTTSEEEEES-CCCCB--TTEEEEEECHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHCCCCEEEECC---HHHHHHHHHHHHHCCCCEEEEEe-ccccC--CcEEEEEechhHHHHHHHHHHHHhcCC
Confidence 4557778889999888653 34556666666665 67777652 22110 110 00 0011111111 1
Q ss_pred CEEEEEcCccccccCcHHHHHHHHHHHHHcCCCc--EEecCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021545 148 AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 224 (311)
Q Consensus 148 AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~--y~ip~g-~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~v 224 (311)
-+|=.+....... ..++.....+-++..+++. .+.-.+ ..++. .|+ .++.++.++ .+|.||.+.
T Consensus 150 ~kIGfVgg~~~p~--v~~~~~GF~~G~k~~np~i~v~~~~~g~~~d~~--kg~-~~a~~l~~~--------G~DvIf~~~ 216 (356)
T 3s99_A 150 GIAGYIGSVPVPE--VVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPG--KEA-DAAKALIDQ--------GVDIITQHT 216 (356)
T ss_dssp CEEEEEECCCCHH--HHHHHHHHHHHHHTTCTTCEEEEEECSSSCCHH--HHH-HHHHHHHHT--------TCSEEEESS
T ss_pred CEEEEECCCccHH--HHHHHHHHHHHHHHHCCCCEEEEEECCCCCChH--HHH-HHHHHHHhC--------CCcEEEECC
Confidence 2454554311111 1112222333333334442 111122 23333 343 344555443 379999887
Q ss_pred CcchhHHHHHHHHhhCCCCCeEEEEeccCC
Q 021545 225 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 254 (311)
Q Consensus 225 GtGGt~aGl~~~~~~~~~~~rVigV~~~g~ 254 (311)
|+- |+..+.++.+ ..+||++...+
T Consensus 217 d~~----Gv~~aa~e~G--v~vIG~D~dq~ 240 (356)
T 3s99_A 217 DST----AAIQVAHDRG--IKAFGQASDMI 240 (356)
T ss_dssp SSS----HHHHHHHHTT--CEEEEEESCCG
T ss_pred Cch----HHHHHHHHcC--CEEEEEcCchh
Confidence 652 8888888754 69999987743
No 443
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=27.51 E-value=1.4e+02 Score=26.80 Aligned_cols=53 Identities=8% Similarity=-0.017 Sum_probs=28.5
Q ss_pred EEEEeCCccchHH---HHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEE
Q 021545 93 CIITIGGIQSNHC---RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 150 (311)
Q Consensus 93 ~vVt~g~s~GNhg---~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV 150 (311)
.+|.|| . ||.| ..+|..-+..|+++.++++..... ......++...+..|..+
T Consensus 135 vlVlcG-~-GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~---~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 135 VALLCG-P-HVKGAQGISCGRHLANHDVQVILFLPNFVKM---LESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEC-S-SHHHHHHHHHHHHHHHTTCEEEEECCCCSSC---CHHHHHHHHHHHTSSCEE
T ss_pred EEEEEC-C-CCCHHHHHHHHHHHHHCCCcEEEEEecCCCC---CHHHHHHHHHHHHcCCcc
Confidence 355665 3 4544 455555566899999987653211 001123455555566554
No 444
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=27.51 E-value=1.1e+02 Score=26.51 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=21.2
Q ss_pred eEEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCC
Q 021545 219 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 254 (311)
Q Consensus 219 ~ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~ 254 (311)
.+=++||+|..+.-++..+ ..+..+|+||+....
T Consensus 74 vLDlGcGtG~~~~~la~~~--~~~~~~v~gvD~s~~ 107 (261)
T 4gek_A 74 VYDLGCSLGAATLSVRRNI--HHDNCKIIAIDNSPA 107 (261)
T ss_dssp EEEETCTTTHHHHHHHHTC--CSSSCEEEEEESCHH
T ss_pred EEEEeCCCCHHHHHHHHhc--CCCCCEEEEEECCHH
Confidence 4556666666554443332 346789999998653
No 445
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=27.38 E-value=1.6e+02 Score=25.71 Aligned_cols=51 Identities=14% Similarity=0.123 Sum_probs=31.3
Q ss_pred EEEeCCcchhHHHHHHHHhhCCCCCeEEEEeccCCch------hhHHHHHHhHhhhCC
Q 021545 220 IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD------YFYDYTQGLLDGLNA 271 (311)
Q Consensus 220 ivv~vGtGGt~aGl~~~~~~~~~~~rVigV~~~g~~~------~~~~~i~~~~~g~~~ 271 (311)
-++++++|.|+..++..+... +...+.-|+..|... +...-..++++.++.
T Consensus 57 ~vIGv~wG~Tl~~v~~~l~~~-~~~~~~~V~l~GG~~~~~~~~~~~~i~~~lA~~~~~ 113 (267)
T 3kv1_A 57 MAVAVGQGQNVAAVADHAGIV-TQRNARFVSAIGGTHRSGDIINADHICRRLAKKYGG 113 (267)
T ss_dssp CEEEECCSHHHHHHHHCCCCC-CCCCCEEEESBCBCC----CCCHHHHHHHHHHHHTC
T ss_pred CEEEECchHHHHHHHHhcccc-CCCCCEEEeCCCCCCCCccccCHHHHHHHHHHHhCC
Confidence 367889999999998887543 223344556666321 222334567777775
No 446
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=27.30 E-value=1.4e+02 Score=27.93 Aligned_cols=59 Identities=12% Similarity=-0.065 Sum_probs=39.2
Q ss_pred CEEEEeCCcc------chHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccch---HHHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQ------SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~------GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n---~~~~~~~GAeV~~v~~~ 156 (311)
++|+|++-+. ..+..++-..|.+.|.++.+|+.+..|. .+|. ...+...|-.+.++.+.
T Consensus 179 ~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~------~qGarltA~eL~~~GIpvtlI~Ds 246 (383)
T 2a0u_A 179 VSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPW------NQGARLTVYECVQEDIPCTLICDG 246 (383)
T ss_dssp EEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTT------THHHHTHHHHHHHTTCCEEEECGG
T ss_pred CEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCc------cchHHHHHHHHHHcCCCEEEEehh
Confidence 5677765221 1245666677888999999999887753 2342 34556678888888753
No 447
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=27.27 E-value=2.7e+02 Score=23.22 Aligned_cols=33 Identities=15% Similarity=-0.023 Sum_probs=24.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
..||| |+ +|--|+++|..-.+.|.+++++-+..
T Consensus 9 ~~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 9 VFIVT-GA-SSGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34555 54 46789999999999999987776543
No 448
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=27.11 E-value=61 Score=28.19 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=22.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
|.|| .|| |=.|.+.|..++++|+++++|=
T Consensus 8 DVvI-IGa--GpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 8 DCAV-IGA--GPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCCEEEEe
Confidence 4445 454 6788999999999999988873
No 449
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=27.09 E-value=1.4e+02 Score=27.32 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=28.6
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
+|..+|-..+|.+.+++.+++++|++++++.|..-
T Consensus 157 ~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (335)
T 1dxh_A 157 SYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKAL 191 (335)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred EEEEecCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 45556643479999999999999999999998764
No 450
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=27.01 E-value=2.5e+02 Score=26.65 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=28.8
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 91 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 91 ~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.++|+..|+ |+.|.-+|...+++|.+++++.+...
T Consensus 151 ~~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGG--GFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEECC--CHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 356666675 89999999999999999999987653
No 451
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=26.94 E-value=75 Score=29.01 Aligned_cols=31 Identities=32% Similarity=0.305 Sum_probs=24.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
+|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 16 ~IlIlG~--G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 16 TIGIIGG--GQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4544564 678999999999999999888654
No 452
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=26.85 E-value=1.2e+02 Score=28.54 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=34.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 153 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v 153 (311)
.+|+..|+ |..|.++|..++.+|.+.+++ +... .++..++.+|++.+.+
T Consensus 191 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 191 AKIFVMGA--GVAGLQAIATARRLGAVVSAT-DVRP----------AAKEQVASLGAKFIAV 239 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSST----------THHHHHHHTTCEECCC
T ss_pred CEEEEECC--cHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCceeec
Confidence 35665665 899999999999999975543 3221 2466777799986443
No 453
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.51 E-value=3e+02 Score=23.45 Aligned_cols=54 Identities=19% Similarity=0.023 Sum_probs=33.7
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 155 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~ 155 (311)
..||| |+ +|--|+++|....+.|.+++++-+... .......++..|.++..+.-
T Consensus 33 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 33 TAVVT-GA-GSGIGRAIAHGYARAGAHVLAWGRTDG--------VKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSTH--------HHHHHHHHHTTTCEEEEEEC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEcCHHH--------HHHHHHHHHhcCCcEEEEEe
Confidence 34555 54 467899999999999998776653211 01223445556777766643
No 454
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.42 E-value=93 Score=26.45 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=24.9
Q ss_pred CCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 90 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 90 G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 8 gk~~lVT-Ga-s~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVI-GG-THGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344555 54 4689999999999999987777543
No 455
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=26.38 E-value=65 Score=29.01 Aligned_cols=31 Identities=26% Similarity=0.142 Sum_probs=24.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.|+..|+ |=.|.++|...++.|++++++=+.
T Consensus 13 dVvIVGa--G~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 13 RAEVAGG--GFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECC--CHHHHHHHHHHHHCCCCEEEEecC
Confidence 3554565 788999999999999998887443
No 456
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=26.37 E-value=2.8e+02 Score=23.07 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=24.3
Q ss_pred EEEEeCCccchHHHHHHHHHHHcC---CcEEEEEcCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLN---LDCYLILRTS 126 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~G---l~~~ivv~~~ 126 (311)
.||| |+ +|--|+++|....+.| .+++++.+..
T Consensus 24 vlIT-Ga-sggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 24 ILIT-GC-NRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp EEES-CC-SSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred EEEE-CC-CCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 3454 54 5789999999999999 8888777653
No 457
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=26.18 E-value=1.5e+02 Score=27.11 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=28.5
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
+|..+|-..+|.+++++.+++++|++++++.|+.-
T Consensus 169 ~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 203 (325)
T 1vlv_A 169 KVVFMGDTRNNVATSLMIACAKMGMNFVACGPEEL 203 (325)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 55556643479999999999999999999988754
No 458
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=26.06 E-value=2.1e+02 Score=26.41 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHc------CCCc--EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCC--CC--eEEEeCCcchh--HH
Q 021545 166 LTNILKEKLLKE------GRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVK--FD--DIVVACGSGGT--IA 231 (311)
Q Consensus 166 ~~~~~~~~l~~~------g~~~--y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~--~D--~ivv~vGtGGt--~a 231 (311)
..+++.+.+.+. +-.. +.+|.+-.|+.- ....++.+++.+ .. +| .+++++|+|.. ++
T Consensus 51 ~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~-----~~v~~~~~~~~~----~~~~~~r~d~iIalGGGsv~D~a 121 (393)
T 1sg6_A 51 YTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSR-----QTKADIEDWMLS----QNPPCGRDTVVIALGGGVIGDLT 121 (393)
T ss_dssp HHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSH-----HHHHHHHHHHHT----SSSCCCTTCEEEEEESHHHHHHH
T ss_pred HHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCH-----HHHHHHHHHHHH----cCCCCCCCCEEEEECCcHHHHHH
Q ss_pred HHHHHHhhCCCCCeEEEEec
Q 021545 232 GLSLGSWLGTLKAKVHAFSV 251 (311)
Q Consensus 232 Gl~~~~~~~~~~~rVigV~~ 251 (311)
|.+.+... +.+++|.|..
T Consensus 122 k~~Aa~~~--rgip~i~IPT 139 (393)
T 1sg6_A 122 GFVASTYM--RGVRYVQVPT 139 (393)
T ss_dssp HHHHHHGG--GCCEEEEEEC
T ss_pred HHHHHHhc--CCCCEEEECC
No 459
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=25.98 E-value=1.7e+02 Score=26.46 Aligned_cols=35 Identities=6% Similarity=-0.010 Sum_probs=28.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
+|..+|-..+|.+++++.+++++|++++++.|+.-
T Consensus 150 ~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 184 (307)
T 2i6u_A 150 RLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGF 184 (307)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 55556643479999999999999999999998764
No 460
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=25.97 E-value=3.3e+02 Score=25.81 Aligned_cols=139 Identities=13% Similarity=0.001 Sum_probs=70.5
Q ss_pred eCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCC--CC-------C----ccchHHHHHHCCCE-EEEE-cCcccccc
Q 021545 97 IGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------G----LIGNLLVERLVGAH-IELI-SKEEYSKI 161 (311)
Q Consensus 97 ~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~--~~-------~----~~~n~~~~~~~GAe-V~~v-~~~~~~~~ 161 (311)
.|+.++....++|-.+..++++.+-+........+. .| . ...-..+++.+|-+ |-++ .++.|..
T Consensus 122 iG~~~S~~s~~va~~~~~~~iP~Is~~a~~~~lsd~~~~p~~fr~~p~d~~~~~a~~~ll~~fgw~~V~ii~~d~~~g~- 200 (555)
T 2e4u_A 122 IGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGE- 200 (555)
T ss_dssp EECSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTHH-
T ss_pred ECCCCcHHHHHHHHHHhCcCCceEeCCcCCCccCCcccCCCceeeCCChHHHHHHHHHHHHHcCCeEEEEEEeeChHHH-
Confidence 466778889999999999999886554322111110 01 0 01224566678865 4333 3333422
Q ss_pred CcHHHHHHHHHHHHHcCCCc---EEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHh
Q 021545 162 GSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSW 238 (311)
Q Consensus 162 ~~~~~~~~~~~~l~~~g~~~---y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~ 238 (311)
...+.+.+.+++.|-.. ..+|.... . .-+. ++.+++.. ...+|+||+. |.+..+..+...++
T Consensus 201 ---~~~~~~~~~~~~~gi~v~~~~~~~~~~~-~---~~~~----~~l~~i~~---~s~a~vIi~~-~~~~~~~~~~~~~~ 265 (555)
T 2e4u_A 201 ---TGIEAFEQEARLRNICIATAEKVGRSNI-R---KSYD----SVIRELLQ---KPNARVVVLF-MRSDDSRELIAAAN 265 (555)
T ss_dssp ---HHHHHHHHHHHTTTCEEEEEEEECTTCC-H---HHHH----HHHHHHHT---CTTCCEEEEE-CCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHCCccEEEEEEeCCCCC-h---HHHH----HHHHHHhc---cCCCCEEEEE-cCHHHHHHHHHHHH
Confidence 23344555566554322 12332111 1 1122 23344321 0247887774 56666667777777
Q ss_pred hCCCCCeEEEEec
Q 021545 239 LGTLKAKVHAFSV 251 (311)
Q Consensus 239 ~~~~~~rVigV~~ 251 (311)
..+.+...|+.+.
T Consensus 266 ~~g~~~~~i~s~~ 278 (555)
T 2e4u_A 266 RVNASFTWVASDG 278 (555)
T ss_dssp HTTCCCEEEECTT
T ss_pred HhcCCeEEEEecc
Confidence 7665444455443
No 461
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=25.83 E-value=68 Score=29.04 Aligned_cols=30 Identities=7% Similarity=-0.058 Sum_probs=23.9
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|+..|| |=.|.++|...++.|++++++=+.
T Consensus 9 VvIVGa--G~aGl~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 9 VLINGC--GIGGAMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444565 778999999999999998887543
No 462
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=25.81 E-value=1.9e+02 Score=25.45 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=28.2
Q ss_pred CCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEeccC
Q 021545 215 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 253 (311)
Q Consensus 215 ~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~~g 253 (311)
..||.||+. +...+.|+..++++.+. ++.|+|++-..
T Consensus 237 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvGfD~~~ 277 (349)
T 1jye_A 237 IVPTAMLVA--NDQMALGAMRAITESGLRVGADISVVGYDDTE 277 (349)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEECSBCCG
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCcEEEEEECCcH
Confidence 468999975 56778999999998774 56788876543
No 463
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=25.80 E-value=67 Score=29.21 Aligned_cols=30 Identities=33% Similarity=0.340 Sum_probs=23.5
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
|+..|| |=.|.++|...++.|++++|+=+.
T Consensus 26 V~IVGa--G~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 26 AIVIGA--GIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 444565 778999999999999998887433
No 464
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=25.71 E-value=3e+02 Score=23.21 Aligned_cols=50 Identities=24% Similarity=0.076 Sum_probs=32.9
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
.||| |+ +|--|.++|....+.|.+++++.+.... -......++.++..+.
T Consensus 8 vlVT-Ga-s~gIG~~~a~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~ 57 (281)
T 3m1a_A 8 WLVT-GA-SSGFGRAIAEAAVAAGDTVIGTARRTEA----------LDDLVAAYPDRAEAIS 57 (281)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESSGGG----------GHHHHHHCTTTEEEEE
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHHHHhccCCceEEE
Confidence 3454 54 4789999999999999988877654321 1234455676666554
No 465
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=25.54 E-value=38 Score=33.27 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=26.1
Q ss_pred CCCeEEEeCCcchhHHHHHHHHhhC-CCCCeEEEEeccCCc
Q 021545 216 KFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDP 255 (311)
Q Consensus 216 ~~D~ivv~vGtGGt~aGl~~~~~~~-~~~~rVigV~~~g~~ 255 (311)
.+|+|||..|++| +..+.++. ++..+|.-+|..+..
T Consensus 2 ~yD~IIVG~G~aG----~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAG----NVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTH----HHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHH----HHHHHHHHhCcCCcEEEEecCCcc
Confidence 3899999877765 44555554 378999999987643
No 466
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=25.40 E-value=67 Score=27.98 Aligned_cols=28 Identities=25% Similarity=0.064 Sum_probs=22.4
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
|+..|| |=.|.++|...++.|++++++=
T Consensus 5 V~IIGa--G~~Gl~~A~~L~~~G~~V~vlE 32 (336)
T 1yvv_A 5 IAIIGT--GIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECC--cHHHHHHHHHHHHCCCcEEEEE
Confidence 333565 7889999999999999988773
No 467
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.33 E-value=60 Score=30.40 Aligned_cols=28 Identities=18% Similarity=0.131 Sum_probs=23.0
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEE
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 122 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~iv 122 (311)
+||..|| |-.|.+.|+.-++.|++++|+
T Consensus 3 ~VvVIGa--G~~GL~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 3 PTTVIGA--GFGGLALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECC--cHHHHHHHHHHHHCCCcEEEE
Confidence 3555675 889999999999999998876
No 468
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=25.26 E-value=2.7e+02 Score=24.77 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=23.4
Q ss_pred CCeEEEeCCcchhHHHHHHHHhhC--CCCCeEEEEeccCCch
Q 021545 217 FDDIVVACGSGGTIAGLSLGSWLG--TLKAKVHAFSVCDDPD 256 (311)
Q Consensus 217 ~D~ivv~vGtGGt~aGl~~~~~~~--~~~~rVigV~~~g~~~ 256 (311)
+|.|| .+|+=||+..++.++... +.++. +|+-+.|+..
T Consensus 83 ~d~vv-v~GGDGTl~~v~~~l~~~~~~~~~p-lgiiP~Gt~N 122 (332)
T 2bon_A 83 VATVI-AGGGDGTINEVSTALIQCEGDDIPA-LGILPLGTAN 122 (332)
T ss_dssp CSEEE-EEESHHHHHHHHHHHHHCCSSCCCE-EEEEECSSSC
T ss_pred CCEEE-EEccchHHHHHHHHHhhcccCCCCe-EEEecCcCHH
Confidence 55544 466667777777777643 23444 6777777654
No 469
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.19 E-value=75 Score=28.86 Aligned_cols=28 Identities=11% Similarity=0.018 Sum_probs=22.8
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
||..|| |-.|.+.|+..++.|++++++=
T Consensus 3 VvVIGa--GiaGLsaA~~La~~G~~V~vlE 30 (425)
T 3ka7_A 3 TVVIGA--GLGGLLSAARLSKAGHEVEVFE 30 (425)
T ss_dssp EEEECC--BHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCceEEEe
Confidence 444565 8899999999999999987774
No 470
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=25.17 E-value=2.7e+02 Score=22.44 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=24.2
Q ss_pred EEEeCCccchHHHHHHHHHH-HcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAK-YLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~-~~Gl~~~ivv~~ 125 (311)
|+..|+ +|.-|+++|.... ..|.+++++.+.
T Consensus 8 vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGA-AGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEST-TSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEeC-CcHHHHHHHHHHHhcCCceEEEEecC
Confidence 433454 5899999999988 899998888764
No 471
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=25.11 E-value=2.8e+02 Score=22.63 Aligned_cols=31 Identities=26% Similarity=0.174 Sum_probs=23.7
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |+ +|--|+++|....+.|.+++++-+.
T Consensus 4 vlVT-Ga-s~gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 4 IVIT-GA-SSGLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp EEEE-ST-TSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEe-cC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 54 4789999999999999997776553
No 472
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=25.07 E-value=72 Score=28.43 Aligned_cols=30 Identities=23% Similarity=0.102 Sum_probs=23.6
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
||..|| |=.|.++|+..++.|++++++=..
T Consensus 20 vvIIGg--G~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 20 AVVIGG--GIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444565 789999999999999998877543
No 473
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=25.07 E-value=3e+02 Score=23.94 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=43.5
Q ss_pred HHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC--CccchHHHHHHCCCEEEEEcCcccc
Q 021545 82 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP--GLIGNLLVERLVGAHIELISKEEYS 159 (311)
Q Consensus 82 ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~--~~~~n~~~~~~~GAeV~~v~~~~~~ 159 (311)
+...+.+.|.+.+| |+ +.-++..=+..|-.+.+|+|.-.+.-...- .+.-+...+...||+++.+++.-|.
T Consensus 167 ~A~~a~~aG~~GvV-~s------a~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~ 239 (255)
T 3ldv_A 167 LATLTKNAGLDGVV-CS------AQEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQ 239 (255)
T ss_dssp HHHHHHHTTCSEEE-CC------HHHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHcCCCEEE-EC------HHHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhC
Confidence 34445677889998 33 224555556678888889887654211000 0122355666789999999885454
No 474
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=24.90 E-value=64 Score=30.78 Aligned_cols=29 Identities=21% Similarity=0.223 Sum_probs=22.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
+.|| .|+ |-.|.+.|..+++.|++++++=
T Consensus 43 DVvV-VGa--G~AGl~AA~~aa~~G~~V~vlE 71 (510)
T 4at0_A 43 DVVV-AGY--GIAGVAASIEAARAGADVLVLE 71 (510)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCcEEEEe
Confidence 4444 565 8899999999999999977663
No 475
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.76 E-value=80 Score=27.53 Aligned_cols=30 Identities=7% Similarity=0.026 Sum_probs=23.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
++|...|+ |+.|.++|..++..|++++++-
T Consensus 5 ~kV~VIGa--G~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGT--GVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEe
Confidence 34544564 9999999999999999877763
No 476
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=24.53 E-value=1.1e+02 Score=27.81 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=37.5
Q ss_pred EEEEeCCc-cchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEc
Q 021545 93 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 154 (311)
Q Consensus 93 ~vVt~g~s-~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~ 154 (311)
+|..+|-. .||.+++++.+++++|++++++.|..-.. + ..-+..++..|+++..+.
T Consensus 157 ~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~----~--~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 157 KIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRM----P--RHIVEELREKGMKVVETT 213 (308)
T ss_dssp EEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCC----C--HHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccC----C--HHHHHHHHHcCCeEEEEc
Confidence 45555632 47999999999999999999999876421 0 112344556677765543
No 477
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=24.50 E-value=2.1e+02 Score=26.35 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=35.0
Q ss_pred CEEEEeCCcc------chHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccch---HHHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQ------SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~------GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n---~~~~~~~GAeV~~v~~~ 156 (311)
++|+|++-+. ..+..++-..|++.|.++.+|+.+..|. .+|. ...+...|-.+.++.+.
T Consensus 148 ~~ILThcnsg~lat~g~gtal~~l~~A~~~gk~~~V~v~EtRP~------~qG~rlta~eL~~~GI~vtlI~Ds 215 (351)
T 1t5o_A 148 DVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVIACETRPL------NQGSRLTCWELMEDGIDVTLITDS 215 (351)
T ss_dssp CEEEECSCCSSSSSSSSCSHHHHHHHHHHTTCCCEEEEECCTTT------THHHHTHHHHHHHTTCCEEEECGG
T ss_pred CEEEEecCCccccccCCChHHHHHHHHHHCCCEEEEEEeCCCcc------cccHHHHHHHHHhCCCCEEEEehh
Confidence 5677764221 1234455566777888888888777653 2342 34455568778777653
No 478
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=24.48 E-value=1.2e+02 Score=26.32 Aligned_cols=12 Identities=8% Similarity=-0.020 Sum_probs=9.0
Q ss_pred CCCeEEEEeccC
Q 021545 242 LKAKVHAFSVCD 253 (311)
Q Consensus 242 ~~~rVigV~~~g 253 (311)
..++|..|.+..
T Consensus 220 ~gI~vn~v~PG~ 231 (294)
T 3r3s_A 220 KGIRVNIVAPGP 231 (294)
T ss_dssp GTCEEEEEEECS
T ss_pred cCeEEEEEecCc
Confidence 368888888764
No 479
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=24.47 E-value=80 Score=26.73 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=23.7
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|+..|| |-.|.++|...++.|++++++=+
T Consensus 5 vvIIG~--G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 5 VIIIGG--SYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeC
Confidence 444565 78899999999999999888864
No 480
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=24.39 E-value=1.4e+02 Score=25.99 Aligned_cols=49 Identities=16% Similarity=-0.018 Sum_probs=28.1
Q ss_pred EEeCC-cchhHHHHHHHHhhCC--C-CCeEEEEeccCC----ch-hhHHHHHHhHhhhCC
Q 021545 221 VVACG-SGGTIAGLSLGSWLGT--L-KAKVHAFSVCDD----PD-YFYDYTQGLLDGLNA 271 (311)
Q Consensus 221 vv~vG-tGGt~aGl~~~~~~~~--~-~~rVigV~~~g~----~~-~~~~~i~~~~~g~~~ 271 (311)
+++++ +|.|..+++..+.... + +++++ ...|. +. +...-..+|++.++.
T Consensus 60 viGla~~G~T~~~~~~~l~~~~~~~~~v~~v--~L~ggl~~~~~~~~~~~~~~la~~~~~ 117 (264)
T 2r5f_A 60 HIGISSWSSTIRAMVSHMHPQPGKQSAQEVV--QLLGGVGNKGAFEATLLTQRLATLLNC 117 (264)
T ss_dssp EEEECTTCHHHHHHHHTCCC--CCCCCSEEE--ECEECCC--CHHHHHHHHHHHHHHHTS
T ss_pred EEEECcchHHHHHHHHhhccccCCCCCcEEE--ECCCCCCCccccCHHHHHHHHHHHhCC
Confidence 57889 9999999999886532 3 45544 33332 11 222223456666665
No 481
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=24.27 E-value=3.3e+02 Score=23.16 Aligned_cols=49 Identities=8% Similarity=0.028 Sum_probs=24.2
Q ss_pred CCchhHHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEE
Q 021545 71 LSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 123 (311)
Q Consensus 71 ~ggnK~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv 123 (311)
+|+..-=+ ..+.....++|.+ |+.++- ......++......|-++..+.
T Consensus 37 TGas~GIG-~aia~~la~~G~~-V~~~~r--~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 37 TGAGSGIG-RAIAHGYARAGAH-VLAWGR--TDGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp ETTTSHHH-HHHHHHHHHTTCE-EEEEES--STHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCCcHHH-HHHHHHHHHCCCE-EEEEcC--HHHHHHHHHHHHhcCCcEEEEE
Confidence 46553322 2344445577875 443332 2233444444555666666654
No 482
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=24.24 E-value=2e+02 Score=24.81 Aligned_cols=71 Identities=14% Similarity=0.151 Sum_probs=39.6
Q ss_pred HHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCC--CccchHHHHHHCCCEEEEEcCcccc
Q 021545 82 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP--GLIGNLLVERLVGAHIELISKEEYS 159 (311)
Q Consensus 82 ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~--~~~~n~~~~~~~GAeV~~v~~~~~~ 159 (311)
+-..+.+.|.+.+| |++ .-++..=+..|-.+.+++|.-.+.-...- .+.-+...+...||+++.+++.-|.
T Consensus 149 ~A~~a~~~g~~GvV-~s~------~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~ 221 (239)
T 3tr2_A 149 MATLAKSAGLDGVV-CSA------QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQ 221 (239)
T ss_dssp HHHHHHHHTCCEEE-CCH------HHHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHcCCCEEE-ECc------hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhC
Confidence 34445667899998 332 22333434467788888887654211000 0112355566689999999875443
No 483
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=24.16 E-value=77 Score=28.32 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=23.4
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
||..|| |=.|.++|+..++.|++++++=+.
T Consensus 7 VvIvG~--G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 7 VLVVGG--GPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc--CHHHHHHHHHHHHCCCCEEEEeCC
Confidence 444565 778999999999999998877544
No 484
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.03 E-value=2.9e+02 Score=22.49 Aligned_cols=31 Identities=6% Similarity=-0.053 Sum_probs=23.4
Q ss_pred EEEeCCccchHHHHHHHHHHHcC--CcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLN--LDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~G--l~~~ivv~~ 125 (311)
++..|+ +|--|+++|....+.| .+++++.+.
T Consensus 6 vlItGa-sggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 6 VVVTGA-NRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp EEESSC-SSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred EEEecC-CchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 333454 4788999999999999 888777654
No 485
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=23.88 E-value=69 Score=29.06 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=23.6
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
||..|| |=.|.++|+..++.|++++++=+.
T Consensus 8 VvIIGg--G~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 8 VLVIGA--GPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEECC--SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 444565 778999999999999998887544
No 486
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=23.75 E-value=3.4e+02 Score=23.11 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=41.2
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. +. .+.+.+++.+.+.+..++..+-+++.... .+..++.+. +.+|.
T Consensus 50 a~~la~~G~~V~~~~r~~-~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~---~~~~~~~~~-------g~iD~ 112 (275)
T 4imr_A 50 AEGLAGAGAHVILHGVKP-GS------TAAVQQRIIASGGTAQELAGDLSEAGAGT---DLIERAEAI-------APVDI 112 (275)
T ss_dssp HHHHHHTTCEEEEEESST-TT------THHHHHHHHHTTCCEEEEECCTTSTTHHH---HHHHHHHHH-------SCCCE
T ss_pred HHHHHHCCCEEEEEcCCH-HH------HHHHHHHHHhcCCeEEEEEecCCCHHHHH---HHHHHHHHh-------CCCCE
Confidence 344455799999887632 11 13344456555656666766655554433 344445433 25999
Q ss_pred EEEeCCc
Q 021545 220 IVVACGS 226 (311)
Q Consensus 220 ivv~vGt 226 (311)
+|...|.
T Consensus 113 lvnnAg~ 119 (275)
T 4imr_A 113 LVINASA 119 (275)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999885
No 487
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=23.69 E-value=2.8e+02 Score=23.46 Aligned_cols=69 Identities=16% Similarity=0.068 Sum_probs=41.7
Q ss_pred HHHHHHCCCEEEEEcCccccccCcHHHHHHHHHHHHHcCCCcEEecCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021545 140 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 219 (311)
Q Consensus 140 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~g~~~y~ip~g~~n~~~~~Gy~t~a~EI~~Q~~~~~~~~~~D~ 219 (311)
.+.+...|++|+.+.+.. +. .+.+.+++ +.+..++..+-+++.. ...+..++.++. +.+|.
T Consensus 28 a~~l~~~G~~V~~~~r~~-~~------~~~~~~~~---~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~------g~id~ 88 (271)
T 3tzq_B 28 SRVLARAGARVVLADLPE-TD------LAGAAASV---GRGAVHHVVDLTNEVS---VRALIDFTIDTF------GRLDI 88 (271)
T ss_dssp HHHHHHTTCEEEEEECTT-SC------HHHHHHHH---CTTCEEEECCTTCHHH---HHHHHHHHHHHH------SCCCE
T ss_pred HHHHHHCCCEEEEEcCCH-HH------HHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHHHc------CCCCE
Confidence 334555799999887642 11 12333333 3445566665555544 334666777766 35999
Q ss_pred EEEeCCcc
Q 021545 220 IVVACGSG 227 (311)
Q Consensus 220 ivv~vGtG 227 (311)
+|...|..
T Consensus 89 lv~nAg~~ 96 (271)
T 3tzq_B 89 VDNNAAHS 96 (271)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99998865
No 488
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=23.59 E-value=2.3e+02 Score=21.16 Aligned_cols=34 Identities=6% Similarity=0.044 Sum_probs=25.9
Q ss_pred CEEEEeCCccchHHHHHHHHHHHc-CCcEEEEEcCCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSK 127 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~-Gl~~~ivv~~~~ 127 (311)
+.++..|+ |.+|..++...+.. |++.+.|++...
T Consensus 5 ~~vlIiGa--G~~g~~l~~~l~~~~g~~vvg~~d~~~ 39 (141)
T 3nkl_A 5 KKVLIYGA--GSAGLQLANMLRQGKEFHPIAFIDDDR 39 (141)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHSSSEEEEEEECSCG
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCcEEEEEEECCc
Confidence 34555675 89999999887764 899999987653
No 489
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=23.48 E-value=1.3e+02 Score=25.71 Aligned_cols=32 Identities=19% Similarity=0.037 Sum_probs=24.1
Q ss_pred EEEEeCCc-cchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s-~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.||| |++ +|.-|+++|....+.|.+++++-+.
T Consensus 10 vlVT-Ga~~s~gIG~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 10 ILVS-GIITDSSIAFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp EEEC-CCSSTTSHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEE-CCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 4554 652 5789999999999999987776543
No 490
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=23.44 E-value=43 Score=31.38 Aligned_cols=48 Identities=6% Similarity=0.034 Sum_probs=35.6
Q ss_pred HHhHHHHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 76 VRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 76 ~Rkl~~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
...+...+.+. .+ ...|+.+|+ ||||+++|...+..|++.+.|++...
T Consensus 39 ~~~l~~~i~~i-~~-~~~v~IiGA--G~~G~~l~~~l~~~g~~ivgfiDdd~ 86 (409)
T 2py6_A 39 PANVREVIARR-GN-ATRLVILGT--KGFGAHLMNVRHERPCEVIAAVDDFR 86 (409)
T ss_dssp CHHHHHHHHHH-GG-GCEEEEECS--SSTHHHHHSCSSSCSSEEEEEECTTT
T ss_pred HHHHHHHHHHh-CC-CCeEEEEeC--CHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence 55555556655 33 345666776 89999999988888999999998743
No 491
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=23.39 E-value=1e+02 Score=25.62 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=28.4
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
+.|+.+|+ |.||+.++-..+..+++.+.|+++..
T Consensus 13 k~v~IiGA--Gg~g~~v~~~l~~~~~~~vgfiDd~~ 46 (220)
T 4ea9_A 13 GGVVIIGG--GGHAKVVIESLRACGETVAAIVDADP 46 (220)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCEEEEcC--CHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 34666776 78999999999999999999998764
No 492
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=23.32 E-value=3.8e+02 Score=23.48 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCCCCCeEEEeCCcchhHHHHHHHHhhCCC----CCeEEEEec
Q 021545 200 AIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 251 (311)
Q Consensus 200 ~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~~~~~~----~~rVigV~~ 251 (311)
.+.+++++- ..||.||+. +...+.|+..++++.+. ++.|+|++-
T Consensus 258 ~~~~ll~~~------~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~ 305 (366)
T 3h5t_A 258 VAKELLETH------PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDG 305 (366)
T ss_dssp HHHHHHHHC------TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHHHcCC------CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 445665542 469999984 56778899999998774 688999874
No 493
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=23.25 E-value=1.2e+02 Score=24.49 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=25.3
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcCC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 126 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~ 126 (311)
|+..|+ +|.-|.+++......|.+++++.+..
T Consensus 3 vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETT-TSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 333454 58999999999999999999888753
No 494
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=23.24 E-value=68 Score=28.91 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=22.8
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEc
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 124 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~ 124 (311)
|+..|| |=.|.++|...++.|++++++=.
T Consensus 5 V~IvGa--G~aGl~~A~~L~~~G~~v~v~E~ 33 (394)
T 1k0i_A 5 VAIIGA--GPSGLLLGQLLHKAGIDNVILER 33 (394)
T ss_dssp EEEECC--SHHHHHHHHHHHHHTCCEEEECS
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 333465 67899999999999999888743
No 495
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=23.20 E-value=2.6e+02 Score=22.96 Aligned_cols=65 Identities=11% Similarity=0.005 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccchHHHHHHCCCEEEEEcCc
Q 021545 81 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE 156 (311)
Q Consensus 81 ~ll~~a~~~G~~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n~~~~~~~GAeV~~v~~~ 156 (311)
.++..+.+-|.+.++. +.+. ...+...-+..+..+.++.+.-.+. .++...+...||+++.+++.
T Consensus 123 ~~~~~a~~~G~~G~~~-~~~~---~~~i~~lr~~~~~~~~iv~gGI~~~-------g~~~~~~~~aGad~vvvGr~ 187 (208)
T 2czd_A 123 RFIEVANEIEPFGVIA-PGTR---PERIGYIRDRLKEGIKILAPGIGAQ-------GGKAKDAVKAGADYIIVGRA 187 (208)
T ss_dssp HHHHHHHHHCCSEEEC-CCSS---THHHHHHHHHSCTTCEEEECCCCSS-------TTHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHhCCcEEEE-CCCC---hHHHHHHHHhCCCCeEEEECCCCCC-------CCCHHHHHHcCCCEEEEChH
Confidence 3344455566666553 2221 2233334444455555544433210 12454555567776666654
No 496
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=23.17 E-value=93 Score=28.64 Aligned_cols=35 Identities=6% Similarity=0.122 Sum_probs=28.6
Q ss_pred CEEEEeCCccchHHHHHHHHHHHcCCcEEEEEcCCC
Q 021545 92 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 127 (311)
Q Consensus 92 ~~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~~~ 127 (311)
.+|..+|=. +|.+.+++.+++++|++++++.|+.-
T Consensus 176 lkva~vGD~-~rva~Sl~~~~~~~G~~v~~~~P~~~ 210 (339)
T 4a8t_A 176 CKVVFVGDA-TQVCFSLGLITTKMGMNFVHFGPEGF 210 (339)
T ss_dssp CEEEEESSC-CHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CEEEEECCC-chhHHHHHHHHHHcCCEEEEECCccc
Confidence 356656644 89999999999999999999988754
No 497
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=23.17 E-value=81 Score=28.63 Aligned_cols=31 Identities=26% Similarity=0.269 Sum_probs=24.2
Q ss_pred EEEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 93 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 93 ~vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
.|+..|| |=.|.++|...++.|++++++=..
T Consensus 7 ~V~IVGa--G~aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 7 RIAVVGG--SISGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECC--CHHHHHHHHHHHhCCCCEEEEecC
Confidence 3444565 778999999999999998888443
No 498
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=23.16 E-value=86 Score=27.05 Aligned_cols=30 Identities=20% Similarity=0.106 Sum_probs=24.0
Q ss_pred EEEeCCccchHHHHHHHHHHHcCCcEEEEEcC
Q 021545 94 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 125 (311)
Q Consensus 94 vVt~g~s~GNhg~AlA~~a~~~Gl~~~ivv~~ 125 (311)
||..|| |-.|.++|..+++.|++++++=+.
T Consensus 10 vvIIG~--G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 10 ITIIGG--GPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEEcC
Confidence 444565 788999999999999998888553
No 499
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=23.09 E-value=78 Score=27.51 Aligned_cols=12 Identities=17% Similarity=0.052 Sum_probs=9.0
Q ss_pred CCCeEEEEeccC
Q 021545 242 LKAKVHAFSVCD 253 (311)
Q Consensus 242 ~~~rVigV~~~g 253 (311)
..++|..|.|..
T Consensus 180 ~gIrvn~v~PG~ 191 (280)
T 3tox_A 180 RGIRVNALLPGG 191 (280)
T ss_dssp TTEEEEEEEECS
T ss_pred cCeEEEEEEECC
Confidence 468888888754
No 500
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=23.06 E-value=2e+02 Score=26.34 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=37.9
Q ss_pred CEEEEeCCccc------hHHHHHHHHHHHcCCcEEEEEcCCCcccCCCCCccch---HHHHHHCCCEEEEEcCc
Q 021545 92 DCIITIGGIQS------NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISKE 156 (311)
Q Consensus 92 ~~vVt~g~s~G------Nhg~AlA~~a~~~Gl~~~ivv~~~~~~~~~~~~~~~n---~~~~~~~GAeV~~v~~~ 156 (311)
++|+|++-|.+ .+..++-..|++.|.++++++.+..|. .+|. ...+...|-.+.++.+.
T Consensus 150 ~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~~V~v~EtRP~------~qG~rlta~eL~~~GI~vtlI~Ds 217 (347)
T 1t9k_A 150 STILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPY------LQGARLTAWELMKDGIEVYVITDN 217 (347)
T ss_dssp EEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTT------THHHHTHHHHHHTTTCEEEEECGG
T ss_pred CEEEEecCCCccccCCccHHHHHHHHHHHCCCeEEEEEeCCCCc------cccHHHHHHHHHhCCCCEEEEehh
Confidence 56778753220 033455566778899999999887753 2342 34556678888888753
Done!