BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021547
(311 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 158/272 (58%), Gaps = 6/272 (2%)
Query: 31 AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
AIV M+ V N + VI L GDP F T A+ D++ S +N YAP G
Sbjct: 18 AIVDNMK-VKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYL 76
Query: 91 LARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE 149
+R VA Y + + P L A D+ +T GC +A+E+ L V+ G NIL+PRPG+ Y
Sbjct: 77 SSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQ-NILIPRPGFSLYR 133
Query: 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKI 209
+ A+ IEV+ ++LLPE+ WE+DL+ +E+L DE TA +V+ NP NPCG+V + +HLQKI
Sbjct: 134 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 193
Query: 210 AETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
A + + ++ADE+YG + F Y PM + VP+++ G ++ RW+VPGWR GW+
Sbjct: 194 LAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWIL 253
Query: 270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
+D + G +K + GP T++Q
Sbjct: 254 IHDRRDIFGNEIRDGLVKLSQRIL-GPCTIVQ 284
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 159/272 (58%), Gaps = 6/272 (2%)
Query: 31 AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
AIV M+ V N + +I L GDP F T A+ D++ S +N YAP G
Sbjct: 41 AIVDNMK-VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFL 99
Query: 91 LARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE 149
+R +A Y + + P L A D+ +T GC +A+++ L V+ G NIL+PRPG+ Y+
Sbjct: 100 SSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQ-NILVPRPGFSLYK 156
Query: 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKI 209
+ A+ IEV+ ++LLPE+ WE+DL+ +E L DE TA +++ NP NPCG+V + +HLQKI
Sbjct: 157 TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKI 216
Query: 210 AETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
A + + ++ADE+YG + F Y P+ + VP+++ G ++KRW+VPGWR GW+
Sbjct: 217 LAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL 276
Query: 270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
+D + G +K + GP T++Q
Sbjct: 277 IHDRRDIFGNEIRDGLVKLSQRIL-GPCTIVQ 307
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 13/277 (4%)
Query: 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
P+P+I L GDP T+A + +++ S N Y P G P AR AVA +
Sbjct: 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 104 LPYK------LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI 157
+K + D++ + G + + +T I G L+P+PG+P YE+ K I
Sbjct: 92 FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDY-ALVPQPGFPHYETVCKAYGI 150
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
+ ++ PE WE DL+ + L D+ T +++ NP NPCG+ + +H++ I A +L
Sbjct: 151 GMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELR 210
Query: 218 ILVIADEVYGHLAF-GSTP---YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
+ + +DE+Y + F G P + + F + VP + LG + +VPGWR GWL DP
Sbjct: 211 LPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDP 270
Query: 274 NGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
+G + +K + GP T++Q L+N
Sbjct: 271 HG--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLN 305
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
VI L GDP F F+ ++A +++ N Y GLP R+A+ E R
Sbjct: 40 VIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
++ DD+ +T EA+++I + G IL+P P +P Y K + + +
Sbjct: 98 DITPDDVRVTAAVTEALQLIFGALLDPGD-EILVPGPSYPPYTGLVKFYGGKPVEYRTIE 156
Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
E W+ D++ + + T AI +INP NP G + + L++I A + I VI+DE+Y
Sbjct: 157 EEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY 216
Query: 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
+ + +I G VPVI + +SK + GWR G++ DP L S + +I
Sbjct: 217 DLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL--SEVREAI 273
Query: 287 KACLGVRSGPSTLIQVC 303
+R P+T Q
Sbjct: 274 DRLARIRLCPNTPAQFA 290
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 71 IVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT 128
++++VR ++ + YAP GLP R A+AE + + + + +T G EA+ ++L
Sbjct: 43 LLEAVRRALGRQDQYAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQ 96
Query: 129 VITRLGAANILLPRPGWPFYE-----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183
+ G ++L PF++ +F + DL PE G+ +DL A+E
Sbjct: 97 SLVGPGDEVVVL----EPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTP 151
Query: 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-----YIP 238
T A+++ P NP G V + L+ IA AR + +I+DEVY L +G P + P
Sbjct: 152 RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAP 211
Query: 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
F T+GS KR G+R GW+
Sbjct: 212 ERTF-------TVGSAGKRLEATGYRVGWI 234
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
+ VI LG G+P A++A+ Y P GL R A+AE L +
Sbjct: 26 KDVISLGIGEPDFDTPQHIKEYAKEAL-----DKGLTHYGPNIGLLELREAIAEKLKKQ- 79
Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIE 158
+ AD +I + LG +A + L+ + G +L+P P + Y A +E
Sbjct: 80 -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGE-EVLIPTPAFVSYAPAVILAGGKPVE 137
Query: 159 VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
V ++ E + ++++ ++ + T A++I +PCNP G VLT + L++IA+ + +
Sbjct: 138 VPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDL 194
Query: 219 LVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
+VI+DEVY H + + + G IT+ SK + + GWR G++A P+ ++
Sbjct: 195 IVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWII 252
Query: 278 QKSGIVGSIKACLGVRSGPSTLIQ 301
++ +K + + P T IQ
Sbjct: 253 ER-----MVKFQMYNATCPVTFIQ 271
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
+ VI LG G+P A++A+ Y P GL R A+AE L +
Sbjct: 25 KDVISLGIGEPDFDTPQHIKEYAKEAL-----DKGLTHYGPNIGLLELREAIAEKLKKQ- 78
Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIE 158
+ AD +I + LG +A + L+ + G +L+P P + Y A +E
Sbjct: 79 -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGE-EVLIPTPAFVSYAPAVILAGGKPVE 136
Query: 159 VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
V ++ E + ++++ ++ + T A++I +PCNP G VLT + L++IA+ + +
Sbjct: 137 VPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDL 193
Query: 219 LVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
+VI+DEVY H + + + G IT+ SK + + GWR G++A P+ ++
Sbjct: 194 IVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWII 251
Query: 278 QKSGIVGSIKACLGVRSGPSTLIQ 301
++ +K + + P T IQ
Sbjct: 252 ER-----MVKFQMYNATCPVTFIQ 270
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V S + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V S + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
YAP G+P R A+AE R+ ++ ++ +T+G +A+ + I G I+L
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y + V + LPE G+ D E V T A+V+ +P NP G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
+ L+ +A A + +++DE+Y HL + + P G + P +T+ + + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
GWR G+ P V++ V S + P T+ Q + L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 35/277 (12%)
Query: 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
R +I LG G F + A ++ M N Y+P G P ++ + +
Sbjct: 57 RELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112
Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF--------AKRNH 156
+L A+++ +T G E + L + G I+ PF++ + K +
Sbjct: 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFE----PFFDQYIPNIELCGGKVVY 168
Query: 157 IEV---RHFDLLPERG--WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
+ + + D RG W +D E E T A++I P NP G V T + L +
Sbjct: 169 VPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGN 228
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFG 266
K +++I+DEVY HL F + ++ P +T+GS + GWR G
Sbjct: 229 ICVKHNVVIISDEVYEHLYFTDS----FTRIATLSPEIGQLTLTVGSAGXSFAATGWRIG 284
Query: 267 WLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVC 303
W+ + N L + C + PS L + C
Sbjct: 285 WVLS--LNAELLSYAAKAHTRICF---ASPSPLQEAC 316
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
Y+ G+ R A A Y R + +++ +T G EA+ VI G IL+
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGD-EILVLE 133
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P + Y +FAK +++ E G+ + + +E+ +E T IV+ NPCNP G V
Sbjct: 134 PFYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYG 192
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-----PVITLGSISKR 257
+ + E A + G+ +I DEVY + F G F S + V+ + S+S +
Sbjct: 193 KDEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXK 245
Query: 258 WIVPGWRFGWLATND 272
+ G R G L T +
Sbjct: 246 FSACGARVGCLITRN 260
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVITRLGAANIL 139
N Y FG P +A+++ ++ + ++ ++ +T+G EA+ + G I+
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVII 191
+ P + YE K R L P + W +D +EAL +E T I+I
Sbjct: 131 I-EPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN 189
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVIT 250
P NP G V+ L+ +A +K +L ++DEVY H+ F +I + G IT
Sbjct: 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT 249
Query: 251 LGSISKRWIVPGWRFGW 267
+GS K + + GW+ GW
Sbjct: 250 IGSAGKTFSLTGWKIGW 266
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
Y P G P R A+A+ L RD AD+I +T G +++ ++ + G +++P
Sbjct: 63 YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGD-EVIIPA 121
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
P W Y K E ++V E + T +V P NP G V T
Sbjct: 122 PFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT 181
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIV 260
++ IA+ A + G+ V++DE+Y + + ++ +G + + +K + +
Sbjct: 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241
Query: 261 PGWRFGWLA 269
GWR G+LA
Sbjct: 242 TGWRVGFLA 250
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH---FDLLPE- 167
++ +T+G EA+ + + G+ +L+ PFY+S++ + H L+P+
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGSEVLLIE----PFYDSYSPVVAMAGAHRVTVPLVPDG 143
Query: 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
RG+ +D +A+ T A++I +P NP G VL+ L IAE A ++VI DEVY
Sbjct: 144 RGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE 203
Query: 228 HLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGW 267
HL F ++P+ F + IT+ S + + GW+ GW
Sbjct: 204 HLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW 244
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVITRLGAANIL 139
N Y FG P +A+++ ++ + ++ ++ +T+G EA+ + G I+
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVII 191
+ P + YE K R L P + W +D +EAL +E T I+I
Sbjct: 131 I-EPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN 189
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVIT 250
P NP G V+ L+ +A +K +L ++DEVY H+ F +I + G IT
Sbjct: 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT 249
Query: 251 LGSISKRWIVPGWRFGW 267
+GS + + GW+ GW
Sbjct: 250 IGSAGXTFSLTGWKIGW 266
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANIL 139
N YAPM G+ R A+A+ R Y+ AD DI +T G EA+ +T + R G I
Sbjct: 61 NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 140 LPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196
P Y+S+A + V+ L P + VD + AL E T +++ P NP
Sbjct: 121 FD----PSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNP 175
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSIS 255
V + + I VI+DEVY H+ F + + + + + S
Sbjct: 176 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFG 235
Query: 256 KRWIVPGWRFGWLATNDP 273
K + + GW+ G+ P
Sbjct: 236 KTYHMTGWKVGYCVAPAP 253
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
Y+ G+ R A+A + + +ADDI++T G V +++ ++ R IL+P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP 196
P +P Y + + + + L GW ++ V+ ++ N A+V+INP NP
Sbjct: 190 PQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVY------GHLAFGSTPYI--PMGVFGSIVPV 248
G VL ++ I + + G++++ADEVY + F S I +G +P+
Sbjct: 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPL 309
Query: 249 ITLGSISKRWIVP-GWRFGWL 268
++ S+SK + G R G+
Sbjct: 310 VSYQSVSKGYYGECGKRGGYF 330
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 71 IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
+V S + Y G R A+AE+LN +AD++Y T G ++ I +
Sbjct: 60 LVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRAL 119
Query: 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIV 189
T + P +P Y+ F N R ++ + +++D +A+E + +T ++
Sbjct: 120 TSDAYDEFITIAPYFPEYKVFV--NAAGARLVEVPADTEHFQIDFDALEERINAHTRGVI 177
Query: 190 IINPCNPCGNVLTYQHLQKIAE----TARKLG--ILVIADEVYGHLAFG--STPYIPMGV 241
I +P NP G V + + ++K+++ ++++G I +IADE Y + + P++
Sbjct: 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY 237
Query: 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
++V S SK +PG R G++ P+ V K+ + ++
Sbjct: 238 DNTLVCY----SYSKSLSLPGERIGYVLV--PDEVYDKAELYAAV 276
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 43 DPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101
DP V+ LG G P + P + +++ A +D++ N Y FG P +A++
Sbjct: 22 DPS-VVNLGQGFPDISPPSYVKEELSKAAFIDNM-----NQYTRGFGHPALVKALSCLYG 75
Query: 102 RDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
+ ++ ++I + +G ++ + + G I++ PFY+ + +
Sbjct: 76 KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMV----PFYDCYEPMVRMAGA 131
Query: 161 HFDLLPERG------------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
+P R W D +E+ T AI++ P NP G V T Q LQ
Sbjct: 132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQV 191
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
IA+ K L I+DEVY L + ++ + G IT+GS K + V GW+ GW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGW 251
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
V+ LG G FP F A +A +V M N Y FG P + +A + L
Sbjct: 30 VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
++ ++ +T+G A+ + G I++ PF++ + +
Sbjct: 86 QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
+++ +L W++D + T A+V+ P NP G V + + L+ +A
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
++ ++ I DEVY + + +I + G +T+GS K + GW+ GW+
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG 261
Query: 271 ND 272
D
Sbjct: 262 PD 263
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 25/240 (10%)
Query: 43 DPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101
DP V+ LG G P + P + +++ A +D++ N Y FG P +A++
Sbjct: 22 DPS-VVNLGQGFPDISPPSYVKEELSKAAFIDNM-----NQYTRGFGHPALVKALSCLYG 75
Query: 102 RDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
+ ++ ++I + +G ++ + + G I++ PFY+ + +
Sbjct: 76 KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMV----PFYDCYEPMVRMAGA 131
Query: 161 HFDLLPERG------------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
+P R W D +E+ T AI++ P NP G V T Q LQ
Sbjct: 132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQV 191
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
IA+ K L I+DEVY L + ++ + G IT+GS + V GW+ GW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGW 251
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
V+ LG G FP F A +A +V M N Y FG P + +A + L
Sbjct: 30 VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
++ ++ +T+G A+ + G I++ PF++ + +
Sbjct: 86 QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
+++ +L W++D + T A+V+ P NP G V + + L+ +A
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
++ ++ I DEVY + + +I + G +T+GS + GW+ GW+
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 271 ND 272
D
Sbjct: 262 PD 263
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
V+ LG G FP F A +A +V M N Y FG P + +A + L
Sbjct: 30 VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
++ ++ +T+G A+ + G I++ PF++ + +
Sbjct: 86 QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
+++ +L W++D + T A+V+ P NP G V + + L+ +A
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
++ ++ I DEVY + + +I + G +T+GS + GW+ GW+
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 271 ND 272
D
Sbjct: 262 PD 263
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
+ GLP ++A+ +++ K++ D + +T G A E + + G A +L+
Sbjct: 65 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 123
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
P P +P ++ K R +E+ G+++ A+E E +++ NP
Sbjct: 124 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 183
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIV--PVIT 250
NP G +T L + GI +I+DE+Y AF S +I M V V V
Sbjct: 184 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHV 243
Query: 251 LGSISKRWI-VPGWRFGWLATND 272
+ S+S + + +PG+R G + +ND
Sbjct: 244 VYSLSXKDLGLPGFRVGAIYSND 266
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
+ GLP ++A+ +++ K++ D + +T G A E + + G A +L+
Sbjct: 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 140
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
P P +P ++ K R +E+ G+++ A+E E +++ NP
Sbjct: 141 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 200
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
NP G +T L + GI +I+DE+Y AF S +I M V
Sbjct: 201 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 260
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
V + S+SK +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
+ GLP ++A+ +++ K++ D + +T G A E + + G A +L+
Sbjct: 80 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 138
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
P P +P ++ K R +E+ G+++ A+E E +++ NP
Sbjct: 139 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 198
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
NP G +T L + GI +I+DE+Y AF S +I M V
Sbjct: 199 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 258
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
V + S+SK +PG+R G + +ND
Sbjct: 259 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 287
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
+ GLP ++A+ +++ K++ D + +T G A E + + G A +L+
Sbjct: 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 140
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
P P +P ++ K R +E+ G+++ A+E E +++ NP
Sbjct: 141 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 200
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
NP G +T L + GI +I+DE+Y AF S +I M V
Sbjct: 201 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 260
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
V + S+SK +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
+AV ++ ++ Y + +DI G + A+ I L + G A ++ +PF +
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRL 162
Query: 154 RNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
+H V + + +E+D E +E + D N ++ +P NP G V L KIAE
Sbjct: 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAEL 222
Query: 213 ARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWR 264
+K G+++++DE++ LA FG+T + + S I L S +K + + G +
Sbjct: 223 CKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK 276
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 54 DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR-DLPYKLSADD 112
D +FP A I+ + + Y+ G+ R VA Y+ R D D+
Sbjct: 98 DSPSFP--EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDN 155
Query: 113 IYITLGCMEAVEIILTVITRLGAAN---ILLPRPGWPFYES-FAKRNHIEVRHFDLLPER 168
IY+T G + + IL ++ G + +++P P +P Y + ++ + I+V ++ L E
Sbjct: 156 IYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYY-LDEEN 214
Query: 169 GWEVDL----EAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
W +++ AV+ D + + IINP NP G V + + ++ + A + + ++AD
Sbjct: 215 CWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLAD 274
Query: 224 EVYGH---------LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWL 268
EVY +F Y + S V + + S SK ++ G+R G++
Sbjct: 275 EVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYM 329
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
EV + + E GW DLE + L T I I N NP G V +L+++ E A ++G
Sbjct: 128 EVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVG 187
Query: 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPV----ITLGSISKRWIVPGWRFGWLATN 271
+++DEVY + P SI+ V I + S+S + +PG R GW+A N
Sbjct: 188 AYILSDEVYRSFSELDVP--------SIIEVYDKGIAVNSLSXTYSLPGIRIGWVAAN 237
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP-Y 106
+PL G+P T V DA+ S+ Y GLP R+A A +L R
Sbjct: 33 VPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLKRRYDGL 86
Query: 107 KLSAD-DIYITLGCMEA----VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
+ AD +I LG EA V+ +L ++ I+ P P + YE E+ H
Sbjct: 87 TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEI-H 145
Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
F P + D ++ + T + + +P NP G+VL +++ + K G ++
Sbjct: 146 FANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIA 205
Query: 222 ADEVYGHLAFGSTPYIPMGVFG-------SIVPVITLGSISKRWIVPGWRFGWLATN 271
+DE Y + F P+G S ++ S+S R VPG R G++A +
Sbjct: 206 SDECYSEIYFDGNK--PLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGD 260
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 32 IVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91
I++L + ++ ++ + VI L G+P F T D + S++ + Y G+
Sbjct: 17 ILALAQKLE-SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEGKTH-YTDSRGILE 70
Query: 92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF 151
R ++E + D+I IT G + L+ I G +L+ P +P Y++F
Sbjct: 71 LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDE-VLIQNPCYPCYKNF 129
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
+R P + +E++E + T AI+I +P NP G V+ ++I E
Sbjct: 130 -------IRFLGAKP-VFCDFTVESLEEALSDKTKAIIINSPSNPLGEVID----REIYE 177
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
A + +I+DE+Y L + Y + ++ I + S + + GWR G++ +N
Sbjct: 178 FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISN 237
Query: 272 D 272
D
Sbjct: 238 D 238
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 51 GHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA 110
G DP P +A++ + +S M Y P G+P R +A +L + ++S
Sbjct: 42 GDPDPELIPRAVLGEIAKEVLEKEPKSVM---YTPANGIPELREELAAFLKKYDHLEVSP 98
Query: 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-----PFYESFAKRNHIEVRH---- 161
++I IT+G A++++ V+ G ++ P + F + AK + V +
Sbjct: 99 ENIVITIGGTGALDLLGRVLIDPGDV-VITENPSYINTLLAFEQLGAKIEGVPVDNDGMR 157
Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
DLL E+ ++ ++A + I NP G ++ + + + E A K +L+I
Sbjct: 158 VDLLEEK-----IKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLII 212
Query: 222 ADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
D Y + + +P+ + VI G++SK + G+R GW+
Sbjct: 213 EDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSK-VLGTGFRIGWI 258
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
+AV ++ + Y +DI G + A+ I + T+ G A +L+ P +P + +
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEA-VLINSPVYPPFARSVR 131
Query: 154 RNHIEVRHFDLLPERG-WEVDLEAVEALADENTAAIVII-NPCNPCGNVLTYQHLQKIAE 211
N+ ++ L E G +++D E +E EN + ++ NP NP G V + L++I
Sbjct: 132 LNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGH 191
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFG 266
+K +++++DE++ L ++ F ++ P + L S +K + + G +
Sbjct: 192 LCQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNS 248
Query: 267 WLATNDP 273
+ +P
Sbjct: 249 YAIIENP 255
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF 147
G+ R +A+ + +S D + +T G +A+ + G I+ P W
Sbjct: 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS-PVWVS 137
Query: 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207
Y V + + ++ LE VE L T A++I +P NP G V + L+
Sbjct: 138 YIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLE 197
Query: 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
+ A+K +I+DEVY L + + V ++ + SK + GWR G+
Sbjct: 198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 257
Query: 268 LATND 272
L +++
Sbjct: 258 LISSE 262
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182
E I TV + L ++ PG+ Y ++ E+R + L GW++ +EAL
Sbjct: 86 TESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT- 144
Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242
+ + + P NP G + LQ IA+ + L I +I DE + T +IP
Sbjct: 145 PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--AL 202
Query: 243 GSIVPVITLGSISKRWIVPGWRFGWLATND 272
+ L S++K + +PG R G+L +D
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYLVNSD 232
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 32 IVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMF 87
+ L++ V+ +D +I L G +P FP + D +V+ + Y
Sbjct: 21 VRELLKLVETSD---IISLAGGLPNPKTFP----KEIIRDILVEIMEKYADKALQYGTTK 73
Query: 88 GLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLG------AANILL 140
G R + ++L + Y +S D DI IT G +A+++I V G A L
Sbjct: 74 GFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLA 131
Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL--EAVEALADENTAAIVIIN-PC--N 195
+ FYE +I++ L + G +V++ E ++ L + V+ P N
Sbjct: 132 ALQAFNFYEP----QYIQIP----LDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 183
Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255
P G + + + E A + +V+ D+ YG L + P + + VI LG+ S
Sbjct: 184 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFS 243
Query: 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIKACLGV 292
K + PG+R GW+ DP G+++K I S C V
Sbjct: 244 K-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNV 278
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 32 IVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMF 87
+ L++ V+ +D +I L G +P FP + D +V+ + Y
Sbjct: 66 VRELLKLVETSD---IISLAGGLPNPKTFP----KEIIRDILVEIMEKYADKALQYGTTK 118
Query: 88 GLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLG------AANILL 140
G R + ++L + Y +S D DI IT G +A+++I V G A L
Sbjct: 119 GFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLA 176
Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL--EAVEALADENTAAIVIIN-PC--N 195
+ FYE +I++ L + G +V++ E ++ L + V+ P N
Sbjct: 177 ALQAFNFYEP----QYIQIP----LDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228
Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255
P G + + + E A + +V+ D+ YG L + P + + VI LG+ S
Sbjct: 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFS 288
Query: 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIKACLGV 292
K + PG+R GW+ DP G+++K I S C V
Sbjct: 289 K-ILAPGFRIGWM-VGDP-GIIRKMEIAKQSTDLCTNV 323
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 32/273 (11%)
Query: 32 IVSLMESVDKNDPRPVIPLGHGDPA--AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL 89
+ L++ V+ +D VI L G PA FP +A + + + ++ Y G
Sbjct: 31 VRELLKLVETSD---VISLAGGLPAPETFPVETIKKIAVEVLEEHADKAL--QYGTTKGF 85
Query: 90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG------AANILLPRP 143
R A+A ++ + +S +I G +A+++I V G A L
Sbjct: 86 TPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQ 145
Query: 144 GWPFYESFAKRNHIEVRHFDLLP--ERGWEVDLEAVEALADENTAAIVII-----NPCNP 196
+ +Y+ F +P ++G VDL + V I NP
Sbjct: 146 AFKYYDP----------EFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP 195
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256
G ++ +K+ E A + L++ D Y L + P P+ F VI LG+ SK
Sbjct: 196 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK 255
Query: 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289
+ PG+R GW+A + P+ + + SI C
Sbjct: 256 -ILAPGFRIGWVAAH-PHLIRKMEIAKQSIDLC 286
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 81 NCYAPMFGLPLARRAVAE-YLNRDLPYKLSAD---DIYITLGCMEAVEIILTVITRLGAA 136
+ Y+ G+P RRA++ Y +R Y + D + +T+G E + ++ G
Sbjct: 69 HGYSTSRGIPRLRRAISHWYRDR---YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGD- 124
Query: 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196
IL+P P +P + A +VR L+P + +LE + +++ P NP
Sbjct: 125 TILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNP 184
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSI 254
+ +++ A++ ++V+ D Y + + P I M V G+ + ++
Sbjct: 185 TAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSI-MQVPGAKDIAVEFFTL 243
Query: 255 SKRWIVPGWRFGWLATN 271
SK + + GWR G++ N
Sbjct: 244 SKSYNMAGWRIGFMVGN 260
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 45 RPVIPLGHGDPAAFPCFRT------AAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRA 95
+PV LG G+PA A+ D SS Y+ G A
Sbjct: 32 QPVNXLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISXANYSNPQGDSAFIDA 91
Query: 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-------------TRLGAANILLPR 142
+ + NR + L++++I +T G A + + ++ +ILLP
Sbjct: 92 LVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151
Query: 143 PGWPFYESFAKRNHIEVRHFD-LLP---------ERG---WEVDLEAVE---ALADENTA 186
P Y ++ H+E +HF +LP E G + VD EA+E AL +
Sbjct: 152 T--PEYIGYSDV-HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIG 208
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
AI P NP GNVLT + +AE A++ I +I D YG
Sbjct: 209 AICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYG 249
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Query: 93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
++ V +++ + + D I T G + AV + T+ G I++ +PF+ +
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAI- 130
Query: 153 KRNHIEVRHFDLLPERGW-EVDLEAVEALA-DENTAAIVIINPCNPCGNVLTYQHLQKIA 210
K ++ +LL + G+ +D + +E L+ D+N A++ +P NP G V LQKI
Sbjct: 131 KNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-----VPVITLGSISKRWIVPGWRF 265
+ K +++ +DE++ L P VF SI IT + SK + + G
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIM---PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247
Query: 266 GWLATNDPN 274
+ +P+
Sbjct: 248 SNIIIKNPD 256
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 95 AVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR 154
++ +L R +K+ ++ + + G + A+ +++ +T+ I++ P + + S K
Sbjct: 75 SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDK-IMIQEPVYSPFNSVVKN 133
Query: 155 NHIE--VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
N+ E + L + +D E +E ++ ++ NP NP G V T L+K+ +
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMG 240
K + +I+DE++ + +IPM
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMA 220
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-GILVIADEV 225
+ WE++ +E L D + A++++NP NP L I + K + +I+DEV
Sbjct: 227 KNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEV 286
Query: 226 YGHLAFGSTPYIP-MGVFGSIVPVIT--LGSISKRWIVPGWRFGWLATNDPN 274
YG ++P S+VP T + S S + GWR G +A N+ N
Sbjct: 287 YG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCTGWRLGVIALNEKN 331
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 100 LNRDLPYKLSADDIYITLG--CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI 157
LN+ + L DI I LG E +E+ +++ + IL+ P + YE AK++ +
Sbjct: 66 LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK-----ILIIVPSYAEYEINAKKHGV 120
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ---HLQKIAETAR 214
V F L E +D E + + D+ +++I NP NP G ++ + H+ K+AE +
Sbjct: 121 SVV-FSYLDENMC-IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 177
Query: 215 KLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
K +I DE + + F P +G + + + +++K + +PG RFG+ TN+
Sbjct: 178 KT---IIIDEAF--IEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIV 72
K L + + VA FR +N VI L GD P A+VAE A
Sbjct: 11 TKNYLFADLQKRVAQFRL----------ENPQHTVINLSIGDTTQ-PL--NASVAE-AFA 56
Query: 73 DSVR--SSMFNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT 128
S+ SS C Y P FGLP R+ ++E R + A +I+I+ G A +
Sbjct: 57 SSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF---VDAKEIFISDG---AKVDLFR 110
Query: 129 VITRLGA-ANILLPRPGWPFYESFAKRNHI-EVRHFDLLPERGWEVDLEAVEALADENTA 186
+++ G + + P +P Y A+ E+ L E + + D +
Sbjct: 111 LLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----DTHID 165
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---G 243
+ + +P NP G VL L+ I A + IL++ D Y F S P +P +F
Sbjct: 166 ILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPD 223
Query: 244 SIVPVITLGSISKRWIVPGWRFGW 267
+ I + S SK G R GW
Sbjct: 224 ARFCAIEINSFSKPLGFAGIRLGW 247
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 146 PFYESFAKRNHIEVRHFDLLP------ERGWEVDLEAVEA-LADENTAAIVIINPCNPCG 198
P Y++F K IE ++P GW D+ +EA LA +++ +P NP G
Sbjct: 119 PAYDAFYKA--IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTG 176
Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
V T L+ +A+ + G+ VI+DE++ + +G P+IP
Sbjct: 177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP 216
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 28/258 (10%)
Query: 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107
+ LG G+P F T +DA+ + S N Y R A + R +
Sbjct: 26 LDLGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIE 79
Query: 108 LSADDIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
L +++ TLG E + V+ I P P + YE AK ++ LL
Sbjct: 80 LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKF----IKAKSLLX 135
Query: 167 ERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
E D + +VI+N P NP G L+ + L + A K ++I DE
Sbjct: 136 PLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 226 YGHLAFGSTPYIPMGVF--------GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
Y + + +TP P + + V+ + S+SKR PG R G++A + + +L
Sbjct: 196 YSEI-YENTP--PPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD--SRLL 250
Query: 278 QKSGIVGSIKACLGVRSG 295
+K + +A LG S
Sbjct: 251 EK---YKAFRAYLGYTSA 265
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 12/236 (5%)
Query: 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
F T AI D+V+ F Y P L +A AE+ Y+ + I+ +
Sbjct: 35 FSTCPAVLQAITDAVQREAFG-YQP--DGSLLSQATAEFYADRYGYQARPEWIFPIPDVV 91
Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
+ I + T + +++P P +P + E D ++L VE
Sbjct: 92 RGLYIAIDHFTP-AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKG 146
Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
+I++ NP NP G V + L ++ + A + V+ DE++ L F + G
Sbjct: 147 FQAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAG 206
Query: 241 VFGSIVPV-ITLGSISKRWIVPGWRFGWLATNDPNGV---LQKSGIVGSIKACLGV 292
V + V IT+ + S W + G + + ++P+ Q S ++ + LG+
Sbjct: 207 VSDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGL 262
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL--GCMEAVEIILTVITRLGAANILL 140
+ GLP R+A+A+++ + ++ D + + G A E I+ + G A L+
Sbjct: 79 FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA-FLV 137
Query: 141 PRPGWP-FYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAI-----VIINP 193
P P +P F R +++ +++ +AV EA + + I ++ NP
Sbjct: 138 PSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNP 197
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG--------VFGSI 245
NP G L L+ + + I ++ DE+Y F + ++ + + +
Sbjct: 198 SNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNK 257
Query: 246 VPVITLGSISKRWIVPGWRFG 266
V + S+SK +PG+R G
Sbjct: 258 DLVHIVYSLSKDMGLPGFRVG 278
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
+AVA++ + + D G + A+ + T G IL+ P + + S +
Sbjct: 69 KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGD-QILVQEPVYNXFYSVIE 127
Query: 154 RNHIEVRHFDLLPERG-----WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
N V DL+ E W DLE E LA + V NP NP G + + +++
Sbjct: 128 GNGRRVISSDLIYENSKYSVNW-ADLE--EKLATPSVRXXVFCNPHNPIGYAWSEEEVKR 184
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV 260
IAE K +L+I+DE++G L I P T+ +K W+V
Sbjct: 185 IAELCAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
R+ VA++ Y+L +++ T G E +E++ V+ N + P + Y A
Sbjct: 73 RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDT-TTNTVXATPTFVQYRQNA 125
Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
EVR LL + E DLE DE T + I NP NP GN + +Q +
Sbjct: 126 LIEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 213 ARKLGILVIADEVY 226
+LV+ DE Y
Sbjct: 184 VPS-DVLVVLDEAY 196
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 45 RPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102
+ I G G DP FP A +A++ I ++ Y+ G P+ ++ + + L R
Sbjct: 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTL--QYSTTEGDPVLKQQILKLLER 100
Query: 103 DLPYK-LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
L D++ T+G +A+++I + + +L P Y + +
Sbjct: 101 XYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVL----DDPAYLGAINAFRQYLAN 156
Query: 162 FDLLPERGWEVDLEAVE---ALADENTAA------IVIINPCNPCGNVLTYQHLQKIAET 212
F ++P DL +E + D+N V+ N NP G + + + + E
Sbjct: 157 FVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEI 216
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
A K + ++ D+ YG L + P+ G V+ L + SK + PG R G +A
Sbjct: 217 AEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-VLAPGLRIGXVA 272
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 16/205 (7%)
Query: 67 AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
A +A+ S+ + Y GLP R+ +A L + IT G +
Sbjct: 49 AVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLA 107
Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP---ERGWEVDLEAVEA-LAD 182
T + G + + PG+P Y +R L+P E L+ V A A
Sbjct: 108 FTALFDSGD-RVGIGAPGYPSYRQI-------LRALGLVPVDLPTAPENRLQPVPADFAG 159
Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242
+ A + + +P NP G L + + E A+ G I+DE+Y + + + + +
Sbjct: 160 LDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELT 219
Query: 243 GSIVPVITLGSISKRWIVPGWRFGW 267
+ S SK + GWR GW
Sbjct: 220 DE---CYVINSFSKYFSXTGWRVGW 241
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 85 PMFGLPLARRAVAE----YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
P+FG L + + + + + + + I + G + A+ + T+ + ++
Sbjct: 53 PIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQ 112
Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLP----ERGWEVDLEAVEALADENTAAIVIINPCNP 196
P PF+E N R + P + +D E +E + ++ +P NP
Sbjct: 113 PPIYPPFFEXVTTNN----RQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNP 168
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
G V + L K+ K ++V+ADE++ + + + P
Sbjct: 169 IGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFA 212
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 24/258 (9%)
Query: 31 AIVSLMESVDKNDPRP-VIPLGHGDPAAFPCFRT--AAVAEDAIVDSVRSSMFNCYAPMF 87
I L E ++ P I LG G+PA P + + D + + Y
Sbjct: 16 GITRLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQTLLTDXVESGKAADALCNYDGPQ 75
Query: 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGW 145
G A+A L L + + +I +T G A + + R + + P
Sbjct: 76 GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLA 135
Query: 146 PFYESFAKRN-----HIEVR-HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
P Y +A + R + +LLPE ++ ++ E T I + P NP GN
Sbjct: 136 PEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGN 195
Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSI 254
V+T + L K+ A + I ++ D YG P+ P +F P +I S+
Sbjct: 196 VITDEELXKLDRLANQHNIPLVIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSL 248
Query: 255 SKRWIVPGWRFGWLATND 272
SK + PG R G + ND
Sbjct: 249 SKLGL-PGSRCGIIIAND 265
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLE 175
+G E + +L +T +LLP +P Y F +R F L+P R DL+
Sbjct: 94 IGSQEGLAHLLLALTE-PEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLREDGLADLK 149
Query: 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235
AV +++ P NP G V + + ++ ARK G+ +I D Y +
Sbjct: 150 AVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEA 209
Query: 236 YIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
P+ + G+ V+ L S+SK + + G+R G+
Sbjct: 210 PSPLALPGAKERVVELFSLSKSYNLAGFRLGF 241
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 47 VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
VI LG GD P T+A+A+ A S ++ Y G R A+A+ L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
+ DD++++ G +I + I + P +P Y
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
K +IE + PE G+ DL V T I +P NP G T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
A+K G +++ D Y P + G+ + S SK G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGW 281
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE--TARKLGILVIAD 223
P+ GW+ ++ L D + +NP NP + + L ++ ++ +L++ D
Sbjct: 226 PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTD 285
Query: 224 EVYGHLA--FGSTPYIPMGVFGSIVPVITL--GSISKRWIVPGWRFGWLATNDPN 274
+VYG A F S S+ P TL S SK + GWR G +A + N
Sbjct: 286 DVYGTFADEFQS--------LFSVCPRNTLLVYSFSKYFGATGWRLGVIAAHKDN 332
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 111 DDIYITLGCMEAVEI-ILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP--- 166
D + IT G A+ + + + R I+ P + FA R +E + +P
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQP-------DYFANRKLVEFFEGEXVPVQL 155
Query: 167 ------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
E +DL +E + NP NP G V + + + +IA A + G V
Sbjct: 156 DYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATV 215
Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFG 266
IAD++Y L + Y + ++ V+T+ S + G+R G
Sbjct: 216 IADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 47 VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
VI LG GD P T+A+A+ A S ++ Y G R A+A+ L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
+ DD++++ G +I + I + P +P Y
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
K +IE + PE G+ DL V T I +P NP G T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
A+K G +++ D Y P + G+ + S S+ G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGW 281
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 27/236 (11%)
Query: 47 VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
VI LG GD P T+A A+ A S ++ Y G R A+A+ L
Sbjct: 58 VISLGIGDTTEPIPEVITSAXAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
+ DD++++ G +I + I + P +P Y
Sbjct: 116 -GIGDDDVFVSDGAK--CDISRLQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
K +IE + PE G+ DL V T I +P NP G T + L ++ E
Sbjct: 173 QKYGNIE--YXRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
A+K G +++ D Y P + G+ S SK G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGW 281
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F S ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F S ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 27/236 (11%)
Query: 47 VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
VI LG GD P T+A+A+ A S ++ Y G R A+A+ L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
+ DD++++ G +I + I + P +P Y
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
K +IE + PE G+ DL V T I +P NP G T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
A+K G +++ D Y P + G+ + S S G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGW 281
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 70 AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTV 129
A VD + + + N Y + L R +A Y+ + ++ D+++ G E ++ +L
Sbjct: 54 ATVDKIATEL-NRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111
Query: 130 ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG--WEVDLE-AVEALADENTA 186
G + +P + + AK H E + RG + +D++ A+E + +
Sbjct: 112 FGGPGRTALGF-QPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPD 166
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
+ + P NP G+V + +++I A +VI DE Y F +P +
Sbjct: 167 IVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPT 221
Query: 247 PVITLGSISKRWIVPGWRFGWLATN 271
++ ++SK + G R G+ N
Sbjct: 222 KLVVSRTMSKAFDFAGGRLGYFVAN 246
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 70 AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTV 129
A VD + + + N Y + L R +A Y+ + ++ D+++ G E ++ +L
Sbjct: 51 ATVDKIATEL-NRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 108
Query: 130 ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG--WEVDLE-AVEALADENTA 186
G + +P + + AK H E + RG + +D++ A+E + +
Sbjct: 109 FGGPGRTALGF-QPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPD 163
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
+ + P NP G+V + +++I A +VI DE Y F +P +
Sbjct: 164 IVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPT 218
Query: 247 PVITLGSISKRWIVPGWRFGWLATN 271
++ ++SK + G R G+ N
Sbjct: 219 KLVVSRTMSKAFDFAGGRLGYFVAN 243
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F ++ M V G ++
Sbjct: 201 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 260
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 261 DSFSXI----ISSGLRIGFLTGPKP 281
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
N NP GN LT + ++I E ARK L+I D+ Y L F ++ M V G ++
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
+ I I G R G+L P
Sbjct: 259 DSFSXI----ISSGLRIGFLTGPKP 279
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE--TARKLGILVIAD 223
P W+ ++ L D +NP NP + + L+++ + + ++++ D
Sbjct: 227 PALNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTD 286
Query: 224 EVYGHLAFGSTPYIPMGVFGSIVPVITL--GSISKRWIVPGWRFGWLATNDPN 274
+VYG A G +I P TL S SK + GWR G +A + N
Sbjct: 287 DVYGTFADGFQSLF------AICPANTLLVYSFSKYFGATGWRLGVVAAHKEN 333
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
Y+P G R VAE++ + +++ IT G +A++++ V G+ +L
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLL--- 120
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC--NPCGNV 200
P Y + ++ F +P DL+A+E + + + P NP G +
Sbjct: 121 -EAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGL 179
Query: 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGST---PYIPMGVFGSIVPVITLGSISKR 257
+++ + + G++V+ D+ Y L FG + VI LGS SK
Sbjct: 180 TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK- 238
Query: 258 WIVPGWRFGWLATNDPNGVLQK 279
+ PG R + A P LQK
Sbjct: 239 VLSPGLRVAF-AVAHPE-ALQK 258
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 70 AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTV 129
A VD + + + N Y + L R +A Y+ + ++ D+++ G E ++ +L
Sbjct: 54 ATVDKIATEL-NRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111
Query: 130 ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG--WEVDLE-AVEALADENTA 186
G + +P + + AK H E + RG + +D++ A+E + +
Sbjct: 112 FGGPGRTALGF-QPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPD 166
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
+ + P NP G+V + +++I A +VI DE Y F +P +
Sbjct: 167 IVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPT 221
Query: 247 PVITLGSISKRWIVPGWRFGWLATN 271
++ ++S + G R G+ N
Sbjct: 222 KLVVSRTMSXAFDFAGGRLGYFVAN 246
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 5/159 (3%)
Query: 72 VDSVRSSMFNCYAPMFGLPL----ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127
+ +R + + Y + GLP A R ++N D+P + + GC + ++
Sbjct: 67 IQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSXQGCFVSF-LVA 125
Query: 128 TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187
+ L PG+ + + + FDL RG ++ + L +
Sbjct: 126 NRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCS 185
Query: 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
I+ NP NP T + L+ I E A K ++VI D Y
Sbjct: 186 IIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 5/191 (2%)
Query: 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCMEAVEIILTVITRLGAANILLP 141
Y G ++A+ ++ R L +D + I G + + T + G +LLP
Sbjct: 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDY-VLLP 139
Query: 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
PG+ Y + + +L P + D V++ + T I + P NP G+
Sbjct: 140 DPGYTDYLAGVLLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTA 198
Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVFGSIVPVITLGSISKRWIV 260
T + + + ++ D YG F + P I G V I + S+SK +
Sbjct: 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSLSKGYNX 257
Query: 261 PGWRFGWLATN 271
G+R G+ N
Sbjct: 258 SGFRVGFAVGN 268
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + PGWP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + PGWP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + PGWP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 36/217 (16%)
Query: 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121
+ A A DA+V + N YA L L + A + ++ A I +T G E
Sbjct: 33 KAQAAARDAVVKA------NRYAKNEILXLGNKLAAHH-------QVEAPSILLTAGSSE 79
Query: 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL- 180
+ + L A +++P + E FAK +V L W D+E ++A
Sbjct: 80 GIRAAIEAYASL-EAQLVIPELTYGDGEHFAKIAGXKVTKVKXL--DNWAFDIEGLKAAV 136
Query: 181 -ADENTAAIVIINPCNPCGNVLTYQHLQK-IAETARKLGILVIADEVYGHLAFGSTPYIP 238
A + + ++NP NP G + ++ IA ++ I DE Y F + P
Sbjct: 137 AAYSGPSIVYLVNPNNPTGTITPADVIEPWIA--SKPANTXFIVDEAYAE--FVNDPR-- 190
Query: 239 MGVFGSIVPVITLG--------SISKRWIVPGWRFGW 267
F SI P IT G + SK G R G+
Sbjct: 191 ---FRSISPXITQGAENIILLKTFSKIHAXAGXRVGY 224
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE--TARKLGILVIAD 223
P W+ ++ L D +NP NP + + L+++ + ++++ D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 224 EVYGHLA--FGSTPYIPMGVFGSIVPVITL--GSISKRWIVPGWRFGWLATNDPN 274
+VYG A F S +I P TL S SK + GWR G +A + N
Sbjct: 287 DVYGTFADDFQS--------LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE--TARKLGILVIAD 223
P W+ ++ L D +NP NP + + L+++ + ++++ D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 224 EVYGHLA--FGSTPYIPMGVFGSIVPVITL--GSISKRWIVPGWRFGWLATNDPN 274
+VYG A F S +I P TL S SK + GWR G +A + N
Sbjct: 287 DVYGTFADDFQS--------LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 193 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 230
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 32/137 (23%)
Query: 117 LGCMEAVEIILTVITRLGAANILL---PRPG-------WPFYESFAKRNH------IEVR 160
+ +E E L + + +GA L RPG + +FA +H +++R
Sbjct: 74 MASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGHTFAFLHHGIGEFGVKLR 133
Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
H D+ DL+A+EA T I +P NP + + +A+ ARK G V
Sbjct: 134 HVDM-------ADLQALEAAMTPATRVIYFESPANPN---MHMADIAGVAKIARKHGATV 183
Query: 221 IADEVYGHLAFGSTPYI 237
+ D Y TPY+
Sbjct: 184 VVDNTY------CTPYL 194
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG 230
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG 230
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 26/242 (10%)
Query: 40 DKNDPRPVIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAE 98
+KN +I LG GD P + A+A+ A + R ++ Y G R AVA
Sbjct: 64 EKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREG-YSGYGAEQGQGALREAVAS 122
Query: 99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE 158
+AD+I+I+ G + I + + + P +P Y + +
Sbjct: 123 TFYGHA--GRAADEIFISDGSKCDIARIQMMFGS--KPTVAVQDPSYPVYVDTSVMMGMT 178
Query: 159 VRH----FDLL------PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
H FD + P+ + DL + T I +P NP G T L +
Sbjct: 179 GDHNGTGFDGIEYMVCNPDNHFFPDLSKAK-----RTDIIFFCSPNNPTGAAATRAQLTE 233
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVPGWRF 265
+ ARK G +++ D Y + S P P ++ G+ I S SK G R
Sbjct: 234 LVNFARKNGSILVYDAAYA--LYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRL 291
Query: 266 GW 267
GW
Sbjct: 292 GW 293
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG 230
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D + A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG 220
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216
+++RH D+ DL+A+EA T I +P NP + + +A+ ARK
Sbjct: 130 VKLRHVDM-------ADLQALEAAMTPATRVIYFESPANPN---MHMADIAGVAKIARKH 179
Query: 217 GILVIADEVYGHLAFGSTPYI 237
G V+ D Y TPY+
Sbjct: 180 GATVVVDNTY------CTPYL 194
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216
+++RH D+ DL+A+EA T I +P NP + + +A+ ARK
Sbjct: 130 VKLRHVDM-------ADLQALEAAMTPATRVIYFESPANPN---MHMADIAGVAKIARKH 179
Query: 217 GILVIADEVYGHLAFGSTPYI 237
G V+ D Y TPY+
Sbjct: 180 GATVVVDNTY------CTPYL 194
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG 230
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG 230
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP +++ +EVR + +D +A + +L + +V+ + C
Sbjct: 133 VWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 192
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y G
Sbjct: 193 NPTGIDPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG 230
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
P G T + Q +A+ + + G L + D Y A G
Sbjct: 183 APTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIAD 223
NP G T + Q +A+ + + G L + D
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFD 211
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIAD 223
NP G T + Q +A+ + + G L + D
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFD 211
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
P G T + Q +A+ + + G L + D Y A G
Sbjct: 183 APTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
P G T + Q +A+ + + G L + D Y A G
Sbjct: 183 APTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
P G T + Q +A+ + + G L + D Y A G
Sbjct: 183 APTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
N G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII--NPC- 194
+ + P WP ++S +EVR + +D +A+ +E A V++ C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGSCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 170 WEVDLEAVEALADENTAAIVIINPCNP----CGNVLTYQHLQKIAETARKLGILVIADEV 225
W VD +A+ A ADE AA+ + +P C V Y K+AE A++LG+ V+
Sbjct: 201 WPVDRDALAACADEVLAAMR--SATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVT-TF 257
Query: 226 YGHLAFGSTPYIPMGVF 242
G P P+G +
Sbjct: 258 MGRGLLADAPTPPLGTY 274
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFARG 220
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 145 WPFYESFAKRNHIE-VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203
WP ++ + R + +RHF++ +D + ++ ++ +V+ NP NP G L+
Sbjct: 97 WPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDC--VVLANPSNPTGQALSA 154
Query: 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV-FGSIVPVITLGSISKRWIVPG 262
L ++ + A KL I DE Y + + G+ +G + S SK + + G
Sbjct: 155 GELDQLRQRAGKLLI----DETY----VDYSSFRARGLAYGE--NELVFRSFSKSYGLAG 204
Query: 263 WRFGWL 268
R G L
Sbjct: 205 LRLGAL 210
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 29/180 (16%)
Query: 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRN 155
+ YL+ D LS +++ + G E + +++ + R ++ P P + Y FAK
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR----SVFFP-PTYSCYRIFAK-- 126
Query: 156 HIEVRHFDLLPERGWEVDLEAVEALADENTA---AIVIINPCNPCGNVLTYQHLQKIAET 212
+ + EV L + + N + I NP NP G+V + +++I +T
Sbjct: 127 --------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKT 178
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
G V DE Y F Y+ + + + SK + + R G++ ++
Sbjct: 179 ----GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 230
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 29/180 (16%)
Query: 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRN 155
+ YL+ D LS +++ + G E + +++ + R ++ P P + Y FAK
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR----SVFFP-PTYSCYRIFAK-- 114
Query: 156 HIEVRHFDLLPERGWEVDLEAVEALADENTA---AIVIINPCNPCGNVLTYQHLQKIAET 212
+ + EV L + + N + I NP NP G+V + +++I +T
Sbjct: 115 --------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKT 166
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
G V DE Y F Y+ + + + SK + + R G++ ++
Sbjct: 167 ----GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII--NPC- 194
+ + P WP ++S +EVR + +D +A+ +E A V++ C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGYCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINP-C- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGWCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINP-C- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGFCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
NP G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + P WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
P G T + Q +A+ + + G L + D + A G
Sbjct: 183 APTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG 220
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP 247
+ I NP NP G+V + +++I +T G V DE Y F Y+
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKT----GAFVALDEAY--YEFHGESYVDF--LKKYEN 193
Query: 248 VITLGSISKRWIVPGWRFGWLATND 272
+ + + SK + + R G++ ++
Sbjct: 194 LAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|1VEF|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1VEF|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKG|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKG|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKH|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKH|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
Length = 395
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 173 DLEAVEALADENTAAIVIINPCNPCGNV--LTYQHLQKIAETARKLGILVIADEV 225
D+EA++ DE TAA VI+ P G V T + L+ E ++ G L+I DE+
Sbjct: 174 DVEALKRAVDEETAA-VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEI 227
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG-W 170
++ + G E + + R GA + P PG+ Y A+ +E F +P R +
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGA-KVXAPVPGFVXYAXSAQFAGLE---FVGVPLRADF 142
Query: 171 EVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARK--LGILVIADEVYG 227
+D A A E+ AIV + P NP GN+ + I A+ LV+ DE Y
Sbjct: 143 TLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQ 202
Query: 228 HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274
A S + FG+++ T+ + + G R G++A DP
Sbjct: 203 PFAQESW-XSRLTDFGNLLVXRTVSKLG----LAGIRLGYVA-GDPQ 243
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
+ + WP ++S +EVR + +D +A + +L + +V+ + C
Sbjct: 123 VWVSNASWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182
Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
N G T + Q +A+ + + G L + D Y A G
Sbjct: 183 NATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG 220
>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
pdb|2EH6|B Chain B, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
Length = 375
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 173 DLEAVEALADENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEV 225
D+++V L DE TA I+I G N + L K+ E ++ +L+I DEV
Sbjct: 161 DIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEV 214
>pdb|3LVJ|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVJ|B Chain B, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVK|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 2)
pdb|3LVL|B Chain B, Crystal Structure Of E.Coli Iscs-Iscu Complex
pdb|3LVM|A Chain A, Crystal Structure Of E.Coli Iscs
pdb|3LVM|B Chain B, Crystal Structure Of E.Coli Iscs
Length = 423
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
L P+R +DL+ +EA ++T + I++ N G V Q + I E R GI+ D
Sbjct: 143 LAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV---QDIAAIGEMCRARGIIYHVD 199
>pdb|1P3W|B Chain B, X-Ray Crystal Structure Of E. Coli Iscs
pdb|1P3W|A Chain A, X-Ray Crystal Structure Of E. Coli Iscs
Length = 404
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
L P+R +DL+ +EA ++T + I++ N G V Q + I E R GI+ D
Sbjct: 124 LAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV---QDIAAIGEMCRARGIIYHVD 180
>pdb|3IKM|A Chain A, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
pdb|3IKM|D Chain D, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
Length = 1172
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 236 YIPMGVFGSIVP-VITLGSISKRWIVPGW 263
Y G++G+I+P V+T G+I++R + P W
Sbjct: 764 YDEEGLYGAILPQVVTAGTITRRAVEPTW 792
>pdb|2OS0|A Chain A, Structures Of Actinonin Bound Peptide Deformylases From E.
Faecalis And S. Pyogenes
Length = 188
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
PG+ + N I V +FD+ E+ +V L+ N AIV+ + + ++
Sbjct: 122 PGY-----VVRHNKITVSYFDMAGEK-HKVRLK--------NYEAIVVQHEIDHINGIMF 167
Query: 203 YQHLQKIAETARKLGILVI 221
Y H+ K A K G+LVI
Sbjct: 168 YDHINKENPFALKEGVLVI 186
>pdb|2OS1|A Chain A, Structures Of Actinonin Bound Peptide Deformylases From E.
Faecalis And S. Pyogenes
Length = 188
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
PG+ + N I V +FD+ E+ +V L+ N AIV+ + + ++
Sbjct: 122 PGY-----VVRHNKITVSYFDMAGEK-HKVRLK--------NYEAIVVQHEIDHINGIMF 167
Query: 203 YQHLQKIAETARKLGILVI 221
Y H+ K A K G+LVI
Sbjct: 168 YDHINKENPFALKEGVLVI 186
>pdb|2E7U|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde
2,1-Aminomutase From Thermus Thermophilus Hb8
Length = 424
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG--HLAFGSTPYIPMG 240
E AAI+ G ++ + K A+ G+L+IADEV LAFG +
Sbjct: 198 EEIAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGFRLAFGGATEL--- 254
Query: 241 VFGSIVPVITLGSI 254
G ++TLG I
Sbjct: 255 -LGLKPDLVTLGKI 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,145,197
Number of Sequences: 62578
Number of extensions: 372533
Number of successful extensions: 996
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 147
length of query: 311
length of database: 14,973,337
effective HSP length: 99
effective length of query: 212
effective length of database: 8,778,115
effective search space: 1860960380
effective search space used: 1860960380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)