Query 021547
Match_columns 311
No_of_seqs 172 out of 1872
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 03:51:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 5.4E-51 1.2E-55 351.8 29.3 299 8-310 27-325 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 3.8E-48 8.1E-53 360.5 32.6 301 6-310 14-316 (430)
3 PLN02187 rooty/superroot1 100.0 3.4E-48 7.3E-53 363.2 32.2 301 3-310 27-330 (462)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-47 2.4E-52 351.4 29.4 253 45-310 28-284 (393)
5 PLN00143 tyrosine/nicotianamin 100.0 9.7E-46 2.1E-50 342.8 31.2 282 28-310 15-296 (409)
6 PLN02656 tyrosine transaminase 100.0 4.1E-45 8.8E-50 338.8 31.2 282 28-310 13-295 (409)
7 PRK13355 bifunctional HTH-doma 100.0 1.3E-43 2.8E-48 337.4 30.2 291 9-310 115-405 (517)
8 PTZ00433 tyrosine aminotransfe 100.0 3.6E-43 7.9E-48 326.1 30.4 293 8-310 3-301 (412)
9 PLN02368 alanine transaminase 100.0 3E-43 6.4E-48 324.2 27.0 262 43-310 36-341 (407)
10 TIGR01265 tyr_nico_aTase tyros 100.0 2.7E-42 5.9E-47 319.5 32.4 283 24-310 12-294 (403)
11 PRK06855 aminotransferase; Val 100.0 1.7E-42 3.6E-47 323.2 30.7 265 43-310 30-297 (433)
12 PLN00175 aminotransferase fami 100.0 2.3E-42 5E-47 320.4 30.4 265 23-310 39-306 (413)
13 PRK07681 aspartate aminotransf 100.0 6.3E-42 1.4E-46 316.7 30.7 271 24-310 13-286 (399)
14 KOG0257 Kynurenine aminotransf 100.0 1.7E-42 3.6E-47 304.0 24.2 247 50-309 36-291 (420)
15 PRK08068 transaminase; Reviewe 100.0 1.1E-41 2.5E-46 314.1 30.6 255 43-310 30-287 (389)
16 TIGR01264 tyr_amTase_E tyrosin 100.0 1.6E-41 3.5E-46 314.3 31.7 280 25-310 13-292 (401)
17 TIGR03540 DapC_direct LL-diami 100.0 1.5E-41 3.2E-46 312.8 30.3 255 43-310 27-284 (383)
18 PRK07366 succinyldiaminopimela 100.0 1.2E-41 2.7E-46 313.8 29.1 253 43-308 28-285 (388)
19 PRK06207 aspartate aminotransf 100.0 1.4E-41 2.9E-46 314.7 28.9 255 44-310 38-298 (405)
20 PRK05942 aspartate aminotransf 100.0 2.3E-41 5E-46 312.4 29.3 255 43-310 33-290 (394)
21 PRK09276 LL-diaminopimelate am 100.0 4.2E-41 9.1E-46 309.9 30.7 255 43-310 29-286 (385)
22 PRK08960 hypothetical protein; 100.0 4.2E-41 9E-46 310.1 30.7 269 23-310 12-281 (387)
23 PRK06290 aspartate aminotransf 100.0 3.3E-41 7.2E-46 312.0 30.0 253 43-310 42-298 (410)
24 PRK09147 succinyldiaminopimela 100.0 2.8E-41 6.2E-46 312.1 28.1 252 43-309 27-291 (396)
25 PRK06348 aspartate aminotransf 100.0 5.9E-41 1.3E-45 308.7 29.9 252 44-310 28-281 (384)
26 PTZ00377 alanine aminotransfer 100.0 3.2E-41 7E-46 318.5 28.3 261 43-310 44-349 (481)
27 PRK09148 aminotransferase; Val 100.0 9.9E-41 2.2E-45 309.0 30.3 255 43-310 28-285 (405)
28 PRK08636 aspartate aminotransf 100.0 1.1E-40 2.5E-45 308.6 30.3 254 43-309 31-294 (403)
29 PRK09265 aminotransferase AlaT 100.0 2.6E-40 5.5E-45 306.4 30.7 262 43-310 31-292 (404)
30 PRK12414 putative aminotransfe 100.0 3.4E-40 7.3E-45 303.6 29.3 252 44-310 28-282 (384)
31 PRK06107 aspartate aminotransf 100.0 4.5E-40 9.7E-45 304.6 29.8 254 43-310 31-288 (402)
32 PRK08361 aspartate aminotransf 100.0 4.4E-40 9.5E-45 303.7 28.4 277 10-310 7-284 (391)
33 PRK07337 aminotransferase; Val 100.0 8.4E-40 1.8E-44 301.5 29.8 268 24-310 11-279 (388)
34 PRK07683 aminotransferase A; V 100.0 1.5E-39 3.3E-44 299.6 31.0 272 14-310 6-280 (387)
35 PRK07550 hypothetical protein; 100.0 1.1E-39 2.3E-44 300.7 29.9 273 23-310 9-283 (386)
36 PRK08363 alanine aminotransfer 100.0 1.3E-39 2.8E-44 301.3 29.7 262 43-310 28-289 (398)
37 TIGR03538 DapC_gpp succinyldia 100.0 9.3E-40 2E-44 301.7 27.2 253 43-310 26-291 (393)
38 PRK08912 hypothetical protein; 100.0 2.7E-39 5.8E-44 298.1 29.6 251 44-309 25-278 (387)
39 PRK07682 hypothetical protein; 100.0 1E-39 2.2E-44 300.0 26.4 251 45-310 20-273 (378)
40 PRK07568 aspartate aminotransf 100.0 4.1E-39 9E-44 297.9 30.1 278 13-310 3-282 (397)
41 PLN02231 alanine transaminase 100.0 2.5E-39 5.4E-44 306.8 28.4 254 44-309 128-400 (534)
42 PRK05839 hypothetical protein; 100.0 3.7E-39 8.1E-44 295.6 28.8 249 43-310 22-279 (374)
43 PRK06108 aspartate aminotransf 100.0 5.1E-39 1.1E-43 295.7 29.5 253 44-310 23-279 (382)
44 PRK05957 aspartate aminotransf 100.0 7.3E-39 1.6E-43 295.3 30.5 252 44-310 26-280 (389)
45 PRK07590 L,L-diaminopimelate a 100.0 3.5E-39 7.6E-44 299.2 28.1 248 43-310 32-308 (409)
46 PRK09257 aromatic amino acid a 100.0 4.7E-40 1E-44 303.9 21.9 263 44-310 25-300 (396)
47 PRK07309 aromatic amino acid a 100.0 8.3E-39 1.8E-43 295.1 29.8 250 45-310 30-284 (391)
48 PRK05764 aspartate aminotransf 100.0 9.1E-39 2E-43 295.2 29.6 279 12-309 3-284 (393)
49 PRK07777 aminotransferase; Val 100.0 1.3E-38 2.8E-43 293.5 30.0 253 44-310 23-279 (387)
50 PRK09082 methionine aminotrans 100.0 6.2E-39 1.4E-43 295.5 27.2 251 44-309 29-282 (386)
51 TIGR03537 DapC succinyldiamino 100.0 8.7E-39 1.9E-43 290.8 27.3 248 46-309 1-252 (350)
52 PTZ00376 aspartate aminotransf 100.0 1.7E-39 3.7E-44 300.8 22.2 278 25-310 13-305 (404)
53 PLN02450 1-aminocyclopropane-1 100.0 5.9E-39 1.3E-43 301.3 23.8 253 44-310 37-318 (468)
54 COG1167 ARO8 Transcriptional r 100.0 1.6E-38 3.5E-43 297.0 25.6 251 45-310 89-345 (459)
55 PLN02607 1-aminocyclopropane-1 100.0 1E-38 2.3E-43 297.6 23.6 287 10-310 10-325 (447)
56 PRK07324 transaminase; Validat 100.0 1.5E-38 3.3E-43 291.4 24.0 245 43-310 24-269 (373)
57 COG1168 MalY Bifunctional PLP- 100.0 3.7E-38 8E-43 274.1 24.1 254 44-310 24-281 (388)
58 PRK08175 aminotransferase; Val 100.0 1E-37 2.2E-42 288.3 28.5 252 43-310 27-284 (395)
59 PLN02376 1-aminocyclopropane-1 100.0 2.7E-38 5.9E-43 297.9 24.9 288 12-310 11-325 (496)
60 PRK06836 aspartate aminotransf 100.0 5.6E-37 1.2E-41 283.2 30.0 276 25-310 13-298 (394)
61 PRK01533 histidinol-phosphate 100.0 3E-38 6.5E-43 288.4 20.8 241 43-310 27-267 (366)
62 PRK07865 N-succinyldiaminopime 100.0 3.7E-37 7.9E-42 281.7 27.1 240 43-310 25-270 (364)
63 TIGR03542 DAPAT_plant LL-diami 100.0 7.5E-37 1.6E-41 283.0 27.2 254 43-310 31-301 (402)
64 PRK02610 histidinol-phosphate 100.0 3.5E-37 7.6E-42 282.6 23.8 243 46-310 29-279 (374)
65 PRK06358 threonine-phosphate d 100.0 4.2E-37 9.2E-42 280.0 23.8 242 44-310 18-259 (354)
66 PRK09275 aspartate aminotransf 100.0 3.6E-37 7.7E-42 288.8 23.5 216 45-273 100-328 (527)
67 PF00155 Aminotran_1_2: Aminot 100.0 1.2E-37 2.6E-42 284.7 19.8 255 46-310 2-266 (363)
68 PRK15481 transcriptional regul 100.0 8.9E-37 1.9E-41 285.0 24.1 241 45-310 85-328 (431)
69 PRK03317 histidinol-phosphate 100.0 7.5E-37 1.6E-41 280.0 21.7 244 46-310 27-273 (368)
70 PLN02397 aspartate transaminas 100.0 1.9E-36 4E-41 281.6 24.5 279 23-310 30-323 (423)
71 PRK14809 histidinol-phosphate 100.0 1.5E-36 3.4E-41 276.8 23.3 240 43-310 28-267 (357)
72 PRK09440 avtA valine--pyruvate 100.0 7.9E-36 1.7E-40 277.5 27.3 265 26-310 14-295 (416)
73 PRK03158 histidinol-phosphate 100.0 1.3E-36 2.8E-41 277.6 21.1 240 44-310 28-267 (359)
74 TIGR03539 DapC_actino succinyl 100.0 1.9E-35 4.2E-40 269.6 27.6 240 43-310 19-264 (357)
75 PRK05166 histidinol-phosphate 100.0 3.2E-36 7E-41 276.0 20.7 243 43-310 34-277 (371)
76 TIGR03801 asp_4_decarbox aspar 100.0 1.6E-35 3.4E-40 277.4 24.8 216 45-273 94-327 (521)
77 PRK06225 aspartate aminotransf 100.0 4.5E-35 9.7E-40 269.4 26.5 243 44-309 27-270 (380)
78 PRK08056 threonine-phosphate d 100.0 1.3E-35 2.9E-40 270.5 22.8 241 43-310 18-258 (356)
79 COG0079 HisC Histidinol-phosph 100.0 4.5E-35 9.8E-40 264.1 22.8 237 44-310 21-257 (356)
80 PRK07392 threonine-phosphate d 100.0 1E-34 2.2E-39 265.1 24.4 239 43-310 20-261 (360)
81 PLN02672 methionine S-methyltr 100.0 1E-34 2.2E-39 287.6 25.5 248 43-308 695-954 (1082)
82 PRK09105 putative aminotransfe 100.0 8.1E-35 1.8E-39 266.3 22.5 236 44-310 42-277 (370)
83 PRK03321 putative aminotransfe 100.0 4.7E-35 1E-39 266.6 20.2 239 45-309 22-260 (352)
84 PRK14807 histidinol-phosphate 100.0 2.1E-34 4.7E-39 262.1 24.4 237 44-310 21-258 (351)
85 PLN03026 histidinol-phosphate 100.0 1.1E-34 2.4E-39 266.5 22.6 234 44-310 51-285 (380)
86 PRK08153 histidinol-phosphate 100.0 1.3E-34 2.8E-39 265.2 22.9 236 45-310 32-268 (369)
87 PRK08637 hypothetical protein; 100.0 2.9E-34 6.3E-39 264.6 24.5 241 66-310 20-284 (388)
88 PRK04870 histidinol-phosphate 100.0 1.4E-34 3.1E-39 263.8 21.7 237 44-310 25-262 (356)
89 PRK02731 histidinol-phosphate 100.0 2.2E-34 4.7E-39 263.7 22.3 241 43-310 30-270 (367)
90 PRK03967 histidinol-phosphate 100.0 4.4E-34 9.5E-39 258.5 23.3 233 44-310 17-249 (337)
91 PRK05387 histidinol-phosphate 100.0 2.3E-34 5E-39 262.1 21.6 234 44-310 23-258 (353)
92 PRK14808 histidinol-phosphate 100.0 2.4E-33 5.2E-38 253.4 22.8 231 43-310 17-247 (335)
93 TIGR01141 hisC histidinol-phos 100.0 2.9E-33 6.3E-38 254.2 21.2 239 43-310 17-255 (346)
94 PRK08354 putative aminotransfe 100.0 3.8E-32 8.1E-37 243.3 24.9 218 43-309 6-223 (311)
95 PRK00950 histidinol-phosphate 100.0 2E-32 4.4E-37 250.1 22.0 235 44-310 33-268 (361)
96 PRK05664 threonine-phosphate d 100.0 4.1E-32 8.9E-37 245.0 23.6 218 44-310 19-237 (330)
97 PRK01688 histidinol-phosphate 100.0 9.9E-33 2.2E-37 251.0 17.8 231 45-310 28-258 (351)
98 PRK04781 histidinol-phosphate 100.0 3.2E-32 7E-37 248.8 19.9 211 80-310 53-265 (364)
99 PRK07908 hypothetical protein; 100.0 4.5E-31 9.7E-36 240.2 24.6 229 43-309 20-248 (349)
100 KOG0256 1-aminocyclopropane-1- 100.0 7.5E-32 1.6E-36 235.3 18.1 223 80-311 114-350 (471)
101 PRK06959 putative threonine-ph 100.0 2.5E-31 5.4E-36 240.5 21.6 220 44-310 23-243 (339)
102 PRK04635 histidinol-phosphate 100.0 6.2E-32 1.3E-36 246.2 17.6 230 44-310 30-259 (354)
103 PRK06425 histidinol-phosphate 100.0 5.2E-31 1.1E-35 238.0 20.2 214 46-302 17-230 (332)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.6E-30 3.4E-35 234.7 22.3 224 43-310 15-239 (330)
105 COG3977 Alanine-alpha-ketoisov 100.0 2.9E-30 6.4E-35 217.1 21.4 270 23-310 11-295 (417)
106 cd00609 AAT_like Aspartate ami 100.0 1.1E-28 2.5E-33 223.6 26.8 251 48-310 1-252 (350)
107 KOG0634 Aromatic amino acid am 100.0 2.5E-29 5.3E-34 221.2 18.3 284 5-310 4-341 (472)
108 PRK13238 tnaA tryptophanase/L- 100.0 6.2E-27 1.3E-31 218.6 21.7 242 43-309 34-310 (460)
109 KOG0258 Alanine aminotransfera 99.9 1.9E-25 4.2E-30 194.1 18.0 271 30-307 34-343 (475)
110 COG1448 TyrB Aspartate/tyrosin 99.9 4.5E-25 9.8E-30 192.6 18.6 281 22-311 7-301 (396)
111 TIGR01822 2am3keto_CoA 2-amino 99.9 2.3E-24 5E-29 199.1 23.9 213 43-289 36-263 (393)
112 cd00617 Tnase_like Tryptophana 99.9 1.3E-24 2.8E-29 200.6 19.9 223 43-289 9-259 (431)
113 PRK05958 8-amino-7-oxononanoat 99.9 1.1E-23 2.4E-28 193.9 22.8 272 8-309 2-284 (385)
114 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.4E-23 3.1E-28 193.3 23.3 237 43-309 31-278 (385)
115 PRK06939 2-amino-3-ketobutyrat 99.9 2E-23 4.3E-28 193.0 22.8 218 43-289 40-267 (397)
116 TIGR00858 bioF 8-amino-7-oxono 99.9 2.9E-23 6.3E-28 189.3 22.8 233 43-308 14-261 (360)
117 cd06502 TA_like Low-specificit 99.9 8.4E-24 1.8E-28 191.4 18.3 221 61-310 8-243 (338)
118 PRK07049 methionine gamma-lyas 99.9 3.6E-23 7.8E-28 192.1 22.4 197 81-309 78-288 (427)
119 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.1E-22 2.4E-27 184.1 23.7 213 59-310 30-249 (346)
120 PLN02822 serine palmitoyltrans 99.9 2.5E-23 5.5E-28 195.9 19.9 241 43-309 107-361 (481)
121 PRK10874 cysteine sulfinate de 99.9 2.9E-22 6.2E-27 185.7 24.6 203 45-272 18-236 (401)
122 TIGR03392 FeS_syn_CsdA cystein 99.9 2.6E-22 5.6E-27 185.8 24.2 203 45-272 15-233 (398)
123 PRK02627 acetylornithine amino 99.9 1.1E-22 2.4E-27 188.1 21.3 245 43-309 37-296 (396)
124 PRK06234 methionine gamma-lyas 99.9 1.4E-22 3.1E-27 187.0 21.0 191 83-308 58-260 (400)
125 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3.3E-22 7.2E-27 182.7 23.2 201 61-289 11-225 (361)
126 KOG0633 Histidinol phosphate a 99.9 1.3E-23 2.7E-28 174.1 11.6 230 44-309 40-271 (375)
127 PLN02242 methionine gamma-lyas 99.9 2.1E-22 4.6E-27 186.3 20.4 187 86-308 75-271 (418)
128 TIGR00707 argD acetylornithine 99.9 2.6E-22 5.6E-27 184.6 20.6 243 43-309 25-284 (379)
129 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1E-21 2.3E-26 179.9 23.4 201 62-290 19-233 (370)
130 PRK13392 5-aminolevulinate syn 99.9 6.5E-22 1.4E-26 183.8 21.8 233 44-309 45-293 (410)
131 PRK08133 O-succinylhomoserine 99.9 1.2E-21 2.6E-26 180.3 22.6 186 87-306 61-251 (390)
132 PRK01278 argD acetylornithine 99.9 8.3E-22 1.8E-26 181.9 21.4 247 42-309 28-289 (389)
133 cd06454 KBL_like KBL_like; thi 99.9 1.7E-21 3.6E-26 177.1 22.6 229 46-308 2-246 (349)
134 TIGR01979 sufS cysteine desulf 99.9 3.1E-21 6.6E-26 178.9 24.7 204 43-272 15-235 (403)
135 PRK03244 argD acetylornithine 99.9 4.1E-22 9E-27 184.4 18.2 240 43-309 41-297 (398)
136 PRK09295 bifunctional cysteine 99.9 1.7E-21 3.6E-26 180.8 22.3 203 45-272 22-240 (406)
137 PRK07179 hypothetical protein; 99.9 2.9E-21 6.4E-26 179.2 23.7 204 43-271 52-263 (407)
138 TIGR02080 O_succ_thio_ly O-suc 99.9 2E-21 4.4E-26 178.1 21.3 194 80-308 45-244 (382)
139 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.9E-21 8.6E-26 177.1 23.1 205 44-272 17-235 (387)
140 PRK10534 L-threonine aldolase; 99.9 2.9E-22 6.2E-27 181.1 15.1 228 47-309 1-243 (333)
141 PRK07504 O-succinylhomoserine 99.9 3.7E-21 8E-26 177.4 22.6 188 87-307 65-257 (398)
142 PRK08045 cystathionine gamma-s 99.9 3E-21 6.6E-26 177.1 21.7 195 80-309 46-246 (386)
143 PLN02721 threonine aldolase 99.9 1.3E-21 2.8E-26 178.1 19.0 214 45-290 5-232 (353)
144 PRK02948 cysteine desulfurase; 99.9 3.6E-21 7.9E-26 177.1 22.1 232 48-309 2-249 (381)
145 PRK08776 cystathionine gamma-s 99.9 4.5E-21 9.8E-26 176.9 22.1 188 88-309 61-254 (405)
146 PLN02483 serine palmitoyltrans 99.9 5.9E-21 1.3E-25 180.2 22.7 213 44-289 99-333 (489)
147 PRK08249 cystathionine gamma-s 99.9 3.9E-21 8.4E-26 177.1 20.7 189 86-308 63-256 (398)
148 PRK07503 methionine gamma-lyas 99.9 5.4E-21 1.2E-25 176.6 21.4 188 87-309 65-260 (403)
149 TIGR01976 am_tr_V_VC1184 cyste 99.9 7.6E-21 1.7E-25 175.9 22.0 200 47-272 18-231 (397)
150 PRK07810 O-succinylhomoserine 99.9 5.1E-21 1.1E-25 176.5 20.7 195 80-309 64-264 (403)
151 TIGR01821 5aminolev_synth 5-am 99.9 1.2E-20 2.5E-25 175.0 22.9 233 44-309 44-292 (402)
152 PRK07811 cystathionine gamma-s 99.9 9.4E-21 2E-25 174.2 21.7 190 85-308 59-254 (388)
153 PLN02855 Bifunctional selenocy 99.9 1.5E-20 3.2E-25 175.4 23.4 204 44-272 30-249 (424)
154 PRK08861 cystathionine gamma-s 99.9 9.9E-21 2.2E-25 173.3 21.5 189 87-309 53-247 (388)
155 cd00613 GDC-P Glycine cleavage 99.9 1.4E-20 3E-25 174.2 22.2 206 44-272 19-240 (398)
156 PRK09064 5-aminolevulinate syn 99.9 2E-20 4.4E-25 173.6 23.2 232 44-308 45-292 (407)
157 PRK07050 cystathionine beta-ly 99.9 9.9E-21 2.1E-25 174.3 20.7 188 87-308 65-258 (394)
158 cd00614 CGS_like CGS_like: Cys 99.9 1.6E-20 3.4E-25 172.0 21.4 191 85-309 38-234 (369)
159 TIGR01328 met_gam_lyase methio 99.9 1.4E-20 3.1E-25 173.1 21.1 188 87-308 59-253 (391)
160 cd00378 SHMT Serine-glycine hy 99.9 2.1E-20 4.6E-25 173.2 22.2 217 45-290 19-249 (402)
161 PRK08247 cystathionine gamma-s 99.9 1.1E-20 2.3E-25 172.8 19.8 194 80-309 46-245 (366)
162 PRK08574 cystathionine gamma-s 99.9 1.8E-20 3.9E-25 172.0 20.8 188 86-308 52-245 (385)
163 PRK06460 hypothetical protein; 99.9 1.9E-20 4E-25 171.6 20.6 183 86-303 44-232 (376)
164 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 8.3E-21 1.8E-25 176.3 18.4 160 87-273 57-220 (418)
165 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.8E-20 8.3E-25 169.9 22.3 188 82-305 50-243 (380)
166 PRK06767 methionine gamma-lyas 99.9 3E-20 6.4E-25 171.0 21.7 189 86-309 60-255 (386)
167 cd06451 AGAT_like Alanine-glyo 99.9 1.4E-20 3.1E-25 171.6 19.1 190 61-272 8-201 (356)
168 cd06453 SufS_like Cysteine des 99.9 4.9E-20 1.1E-24 169.1 22.2 191 61-272 9-215 (373)
169 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.5E-20 7.7E-25 170.2 21.2 194 61-273 10-215 (376)
170 PRK02936 argD acetylornithine 99.9 6.3E-20 1.4E-24 168.7 21.9 247 42-309 26-281 (377)
171 TIGR01437 selA_rel uncharacter 99.9 1.1E-19 2.4E-24 165.8 23.3 197 43-271 6-222 (363)
172 PRK09028 cystathionine beta-ly 99.9 5.8E-20 1.3E-24 168.2 21.3 212 61-309 35-254 (394)
173 cd00610 OAT_like Acetyl ornith 99.9 4.8E-20 1E-24 171.4 20.5 247 43-309 34-307 (413)
174 PRK13393 5-aminolevulinate syn 99.9 1.4E-19 3E-24 167.9 23.2 232 44-309 44-292 (406)
175 PRK05093 argD bifunctional N-s 99.9 7.6E-20 1.6E-24 169.5 21.3 239 42-309 37-298 (403)
176 TIGR03403 nifS_epsilon cystein 99.8 3E-19 6.4E-24 164.5 23.2 228 61-309 9-251 (382)
177 PLN03227 serine palmitoyltrans 99.8 1E-19 2.2E-24 167.7 19.9 228 48-307 1-253 (392)
178 COG0520 csdA Selenocysteine ly 99.8 4.8E-19 1E-23 162.6 23.8 217 27-272 7-239 (405)
179 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.9E-19 4.2E-24 164.8 21.2 195 64-291 10-208 (376)
180 PLN02409 serine--glyoxylate am 99.8 1.3E-19 2.9E-24 167.7 20.2 193 61-272 18-216 (401)
181 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2E-19 4.3E-24 165.3 21.1 191 65-289 14-206 (379)
182 cd00615 Orn_deC_like Ornithine 99.8 5.8E-20 1.3E-24 163.2 16.8 167 88-271 60-233 (294)
183 COG0156 BioF 7-keto-8-aminopel 99.8 2.3E-19 5.1E-24 162.0 20.4 214 43-289 37-264 (388)
184 TIGR02006 IscS cysteine desulf 99.8 4E-19 8.7E-24 164.7 22.3 200 48-273 5-219 (402)
185 PRK07582 cystathionine gamma-l 99.8 1.8E-19 3.9E-24 164.6 19.6 191 80-309 45-241 (366)
186 PRK08248 O-acetylhomoserine am 99.8 5.2E-19 1.1E-23 164.3 22.5 160 87-273 64-227 (431)
187 PRK14012 cysteine desulfurase; 99.8 3.7E-19 8.1E-24 165.0 20.8 201 47-273 4-221 (404)
188 PRK06702 O-acetylhomoserine am 99.8 3.8E-19 8.1E-24 164.3 20.4 154 87-266 61-218 (432)
189 TIGR01329 cysta_beta_ly_E cyst 99.8 5E-19 1.1E-23 162.3 21.0 187 82-303 40-234 (378)
190 TIGR03235 DNA_S_dndA cysteine 99.8 1.4E-18 3.1E-23 158.3 22.6 193 61-273 8-215 (353)
191 TIGR03402 FeS_nifS cysteine de 99.8 1E-18 2.2E-23 160.8 21.6 191 61-272 9-212 (379)
192 PRK04073 rocD ornithine--oxo-a 99.8 6.1E-19 1.3E-23 163.1 20.2 240 42-309 37-301 (396)
193 TIGR01324 cysta_beta_ly_B cyst 99.8 1E-18 2.2E-23 159.9 21.2 186 88-308 51-242 (377)
194 TIGR00713 hemL glutamate-1-sem 99.8 4.5E-19 9.8E-24 165.4 19.1 243 42-309 45-311 (423)
195 PRK13520 L-tyrosine decarboxyl 99.8 2.5E-18 5.5E-23 157.6 23.3 202 61-273 30-236 (371)
196 PRK07269 cystathionine gamma-s 99.8 1.2E-18 2.6E-23 158.7 20.6 194 82-309 50-245 (364)
197 cd06450 DOPA_deC_like DOPA dec 99.8 1.9E-19 4.1E-24 163.4 15.0 198 64-270 12-229 (345)
198 cd01494 AAT_I Aspartate aminot 99.8 1.1E-18 2.3E-23 141.6 17.8 166 89-270 2-169 (170)
199 KOG1549 Cysteine desulfurase N 99.8 1.2E-18 2.5E-23 155.9 19.1 204 43-272 40-257 (428)
200 PRK05939 hypothetical protein; 99.8 1.8E-18 3.9E-23 159.2 21.1 156 90-272 50-208 (397)
201 PRK06084 O-acetylhomoserine am 99.8 2.4E-18 5.1E-23 159.8 21.8 160 87-273 58-221 (425)
202 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.6E-18 3.5E-23 157.7 20.4 190 61-272 8-202 (355)
203 PLN02651 cysteine desulfurase 99.8 4.6E-18 1E-22 155.6 23.3 199 49-273 2-215 (364)
204 PRK13479 2-aminoethylphosphona 99.8 2.8E-18 6.1E-23 157.2 21.5 190 61-272 14-208 (368)
205 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 4.7E-18 1E-22 156.0 22.8 191 65-289 11-205 (375)
206 PRK12381 bifunctional succinyl 99.8 2E-18 4.3E-23 160.1 20.4 244 42-309 36-297 (406)
207 PRK00854 rocD ornithine--oxo-a 99.8 2.3E-18 4.9E-23 159.6 20.8 239 43-309 39-302 (401)
208 PRK07671 cystathionine beta-ly 99.8 3.4E-18 7.3E-23 156.7 21.0 184 87-305 50-239 (377)
209 PRK08064 cystathionine beta-ly 99.8 4.1E-18 8.8E-23 156.9 20.5 180 88-302 55-240 (390)
210 PRK07505 hypothetical protein; 99.8 1.5E-17 3.4E-22 154.1 23.4 234 43-309 44-297 (402)
211 PRK05968 hypothetical protein; 99.8 9.1E-18 2E-22 154.5 21.5 186 88-309 64-256 (389)
212 TIGR03812 tyr_de_CO2_Arch tyro 99.8 4.2E-17 9E-22 149.7 25.8 195 64-273 33-241 (373)
213 PLN02955 8-amino-7-oxononanoat 99.8 2.2E-17 4.8E-22 152.6 23.8 213 44-289 101-341 (476)
214 TIGR02326 transamin_PhnW 2-ami 99.8 6.4E-18 1.4E-22 154.6 20.2 187 62-272 13-206 (363)
215 PRK05967 cystathionine beta-ly 99.8 6.9E-18 1.5E-22 154.4 20.0 190 88-308 61-256 (395)
216 PRK00011 glyA serine hydroxyme 99.8 9.9E-18 2.2E-22 156.1 21.6 218 44-291 24-254 (416)
217 PRK06176 cystathionine gamma-s 99.8 1.2E-17 2.7E-22 153.1 21.3 182 88-304 51-238 (380)
218 TIGR03246 arg_catab_astC succi 99.8 1.4E-17 3E-22 154.0 21.5 239 43-309 33-293 (397)
219 PRK05994 O-acetylhomoserine am 99.8 3.1E-17 6.8E-22 152.5 23.1 157 88-271 64-224 (427)
220 PRK00451 glycine dehydrogenase 99.8 1.8E-17 4E-22 155.7 21.3 201 46-272 69-284 (447)
221 KOG1412 Aspartate aminotransfe 99.8 8.2E-18 1.8E-22 142.8 16.7 282 23-310 12-307 (410)
222 PRK08134 O-acetylhomoserine am 99.8 2.9E-17 6.2E-22 152.7 21.8 158 87-271 64-225 (433)
223 PLN02509 cystathionine beta-ly 99.8 2.3E-17 5E-22 153.8 21.2 166 81-272 125-295 (464)
224 KOG1411 Aspartate aminotransfe 99.8 2.8E-18 6.2E-23 147.5 13.4 283 20-310 31-327 (427)
225 COG1104 NifS Cysteine sulfinat 99.8 2.5E-17 5.3E-22 146.8 19.5 198 47-270 2-215 (386)
226 TIGR03588 PseC UDP-4-keto-6-de 99.8 4.8E-17 1E-21 149.7 22.1 193 64-289 9-209 (380)
227 PF12897 Aminotran_MocR: Alani 99.8 1.7E-17 3.6E-22 145.8 17.8 214 79-310 60-300 (425)
228 PTZ00125 ornithine aminotransf 99.8 2.4E-17 5.3E-22 152.7 19.7 246 43-309 29-293 (400)
229 PRK04366 glycine dehydrogenase 99.8 4.2E-17 9E-22 154.0 21.4 205 50-272 73-291 (481)
230 PRK08088 4-aminobutyrate amino 99.8 3.3E-17 7.1E-22 152.8 20.1 252 42-310 38-314 (425)
231 PRK05937 8-amino-7-oxononanoat 99.8 1.2E-16 2.7E-21 146.4 22.5 197 44-264 3-220 (370)
232 cd00616 AHBA_syn 3-amino-5-hyd 99.8 7.3E-17 1.6E-21 146.8 20.4 185 69-288 3-191 (352)
233 PRK15407 lipopolysaccharide bi 99.8 2.4E-16 5.1E-21 147.0 23.9 207 49-290 27-246 (438)
234 PRK07812 O-acetylhomoserine am 99.8 1.7E-16 3.6E-21 147.5 22.3 160 87-272 69-232 (436)
235 PRK04260 acetylornithine amino 99.8 1.8E-16 3.9E-21 145.7 22.3 243 42-309 26-279 (375)
236 PF00266 Aminotran_5: Aminotra 99.7 4.9E-16 1.1E-20 142.6 23.8 191 61-272 9-215 (371)
237 PRK08114 cystathionine beta-ly 99.7 2E-16 4.3E-21 144.7 19.6 188 87-309 62-257 (395)
238 PRK04612 argD acetylornithine 99.7 6.1E-16 1.3E-20 143.1 22.1 248 42-309 37-301 (408)
239 COG0399 WecE Predicted pyridox 99.7 4.1E-16 8.9E-21 140.1 19.7 192 64-291 14-210 (374)
240 PF01041 DegT_DnrJ_EryC1: DegT 99.7 2.5E-16 5.4E-21 144.0 18.4 193 65-291 5-201 (363)
241 PRK00062 glutamate-1-semialdeh 99.7 1.8E-16 3.8E-21 147.8 17.6 245 42-309 47-313 (426)
242 PRK08360 4-aminobutyrate amino 99.7 1.5E-15 3.2E-20 141.9 23.6 251 41-309 37-318 (443)
243 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 7.3E-16 1.6E-20 140.7 20.9 188 89-308 57-250 (386)
244 PRK09792 4-aminobutyrate trans 99.7 9.1E-16 2E-20 142.7 21.8 250 41-308 36-311 (421)
245 PLN02624 ornithine-delta-amino 99.7 6.8E-16 1.5E-20 145.5 20.4 239 43-309 73-339 (474)
246 PLN00144 acetylornithine trans 99.7 8.8E-16 1.9E-20 141.1 20.1 245 42-308 12-280 (382)
247 TIGR03531 selenium_SpcS O-phos 99.7 1.5E-15 3.2E-20 140.4 20.9 205 89-308 103-316 (444)
248 TIGR01885 Orn_aminotrans ornit 99.7 1.2E-15 2.7E-20 141.3 20.3 239 43-309 35-301 (401)
249 PRK05613 O-acetylhomoserine am 99.7 2.2E-15 4.7E-20 140.1 21.8 158 88-271 70-231 (437)
250 TIGR00700 GABAtrnsam 4-aminobu 99.7 1.3E-15 2.9E-20 141.7 19.9 250 42-308 30-310 (420)
251 PRK06918 4-aminobutyrate amino 99.7 2.9E-15 6.3E-20 140.6 21.2 252 41-309 50-333 (451)
252 PRK04311 selenocysteine syntha 99.7 7.5E-15 1.6E-19 137.0 23.3 210 41-271 75-306 (464)
253 PRK06777 4-aminobutyrate amino 99.7 2.5E-15 5.4E-20 139.8 19.5 252 41-309 36-312 (421)
254 COG2008 GLY1 Threonine aldolas 99.7 1.7E-15 3.7E-20 132.4 16.5 212 48-289 2-223 (342)
255 TIGR01814 kynureninase kynuren 99.7 6.2E-15 1.3E-19 136.9 20.7 197 45-262 26-240 (406)
256 KOG0053 Cystathionine beta-lya 99.7 6.6E-15 1.4E-19 131.7 19.2 188 88-308 78-270 (409)
257 TIGR02618 tyr_phenol_ly tyrosi 99.7 5.5E-15 1.2E-19 135.2 19.1 198 65-289 50-277 (450)
258 COG4992 ArgD Ornithine/acetylo 99.7 3.9E-15 8.4E-20 132.8 16.7 240 41-309 38-298 (404)
259 COG0626 MetC Cystathionine bet 99.7 1.6E-14 3.6E-19 130.6 20.9 190 87-309 63-259 (396)
260 TIGR00474 selA seryl-tRNA(sec) 99.7 3.2E-14 6.9E-19 132.5 22.7 193 61-272 91-302 (454)
261 COG2873 MET17 O-acetylhomoseri 99.6 2E-14 4.4E-19 125.5 18.6 165 87-278 62-230 (426)
262 PRK13034 serine hydroxymethylt 99.6 7E-14 1.5E-18 129.9 23.3 216 24-272 12-245 (416)
263 PRK06434 cystathionine gamma-l 99.6 2.6E-14 5.6E-19 130.7 19.8 183 87-306 64-252 (384)
264 PRK08117 4-aminobutyrate amino 99.6 3.2E-14 6.9E-19 133.1 20.4 250 42-309 40-321 (433)
265 PRK02769 histidine decarboxyla 99.6 1E-13 2.2E-18 126.9 23.0 173 89-272 63-246 (380)
266 PRK07495 4-aminobutyrate amino 99.6 4.8E-14 1E-18 131.2 20.9 250 41-308 36-311 (425)
267 PF01212 Beta_elim_lyase: Beta 99.6 1.4E-15 2.9E-20 133.9 9.8 192 63-274 7-210 (290)
268 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 2.8E-15 6.1E-20 136.6 12.1 175 82-271 60-253 (417)
269 TIGR01788 Glu-decarb-GAD gluta 99.6 9.5E-14 2.1E-18 128.8 22.5 204 61-273 51-277 (431)
270 PRK03715 argD acetylornithine 99.6 8.5E-14 1.8E-18 128.5 21.7 246 43-309 34-292 (395)
271 PRK06058 4-aminobutyrate amino 99.6 1.6E-13 3.5E-18 128.5 22.3 251 42-309 53-333 (443)
272 PRK05964 adenosylmethionine--8 99.6 6.9E-14 1.5E-18 130.5 19.5 252 41-309 38-321 (423)
273 COG0076 GadB Glutamate decarbo 99.6 4.7E-13 1E-17 124.7 23.0 205 61-274 72-293 (460)
274 TIGR00709 dat 2,4-diaminobutyr 99.6 4E-13 8.7E-18 125.8 22.0 252 41-309 35-319 (442)
275 PRK13237 tyrosine phenol-lyase 99.6 2.1E-13 4.6E-18 125.2 19.5 184 82-289 73-284 (460)
276 COG0160 GabT 4-aminobutyrate a 99.6 4.6E-13 9.9E-18 122.7 20.8 252 41-309 52-335 (447)
277 PLN03032 serine decarboxylase; 99.6 1.1E-12 2.4E-17 119.3 22.9 194 66-272 38-249 (374)
278 PRK09264 diaminobutyrate--2-ox 99.6 5.9E-13 1.3E-17 124.1 21.1 251 42-308 36-311 (425)
279 PRK15029 arginine decarboxylas 99.5 2.7E-13 5.8E-18 132.1 18.1 173 82-270 199-398 (755)
280 KOG1368 Threonine aldolase [Am 99.5 7.5E-14 1.6E-18 118.4 12.0 212 45-289 21-248 (384)
281 TIGR02407 ectoine_ectB diamino 99.5 1.5E-12 3.2E-17 121.0 21.5 252 41-308 31-307 (412)
282 PRK08593 4-aminobutyrate amino 99.5 1.8E-12 4E-17 121.3 21.6 252 41-309 38-321 (445)
283 COG0075 Serine-pyruvate aminot 99.5 9E-13 1.9E-17 118.6 17.3 191 61-272 14-208 (383)
284 PRK04013 argD acetylornithine/ 99.5 1.3E-12 2.9E-17 118.9 18.6 241 42-309 21-271 (364)
285 PRK06541 hypothetical protein; 99.5 5.6E-12 1.2E-16 118.4 22.1 251 41-309 48-340 (460)
286 PLN02590 probable tyrosine dec 99.5 5.7E-12 1.2E-16 119.4 22.2 214 54-274 130-372 (539)
287 PRK05769 4-aminobutyrate amino 99.5 9.6E-12 2.1E-16 116.4 23.2 251 42-309 51-334 (441)
288 PLN02414 glycine dehydrogenase 99.5 2.3E-12 4.9E-17 129.0 19.6 177 80-272 554-749 (993)
289 PTZ00094 serine hydroxymethylt 99.5 9.3E-12 2E-16 117.1 22.4 216 25-272 19-259 (452)
290 PLN02880 tyrosine decarboxylas 99.5 1.5E-12 3.3E-17 122.9 16.9 186 82-273 113-323 (490)
291 PLN02263 serine decarboxylase 99.5 2.5E-11 5.4E-16 112.5 23.8 175 88-273 130-317 (470)
292 PRK13580 serine hydroxymethylt 99.4 1.9E-11 4.2E-16 113.6 21.6 223 25-271 34-299 (493)
293 TIGR03372 putres_am_tran putre 99.4 1.4E-11 3.1E-16 114.8 20.7 248 42-309 72-341 (442)
294 PLN02482 glutamate-1-semialdeh 99.4 2E-11 4.3E-16 114.8 21.4 245 42-309 96-362 (474)
295 COG1103 Archaea-specific pyrid 99.4 5.6E-12 1.2E-16 105.9 15.4 204 44-272 14-233 (382)
296 PF00282 Pyridoxal_deC: Pyrido 99.4 1.8E-11 3.8E-16 112.0 20.3 187 80-274 68-279 (373)
297 PLN02760 4-aminobutyrate:pyruv 99.4 2.6E-11 5.6E-16 114.9 21.6 252 42-309 86-382 (504)
298 PF04864 Alliinase_C: Allinase 99.4 2.6E-13 5.6E-18 118.1 6.7 191 89-309 45-241 (363)
299 PRK13578 ornithine decarboxyla 99.4 4.2E-12 9.1E-17 122.7 15.7 174 80-269 166-366 (720)
300 KOG1359 Glycine C-acetyltransf 99.4 2E-12 4.3E-17 109.7 11.7 207 44-289 66-286 (417)
301 KOG1360 5-aminolevulinate synt 99.4 9.9E-12 2.1E-16 109.5 16.3 213 45-290 171-396 (570)
302 PRK07482 hypothetical protein; 99.4 3.3E-11 7.2E-16 113.3 21.2 251 41-309 46-342 (461)
303 PLN03226 serine hydroxymethylt 99.4 6.6E-11 1.4E-15 111.4 23.0 221 24-272 18-260 (475)
304 TIGR03799 NOD_PanD_pyr putativ 99.4 3.6E-11 7.8E-16 114.0 21.1 184 81-273 119-349 (522)
305 PLN02271 serine hydroxymethylt 99.4 1.2E-10 2.5E-15 109.1 23.5 222 25-271 133-374 (586)
306 PLN02994 1-aminocyclopropane-1 99.4 3.7E-12 7.9E-17 101.3 11.0 128 13-147 9-153 (153)
307 PRK11522 putrescine--2-oxoglut 99.4 2.7E-11 5.9E-16 113.6 18.8 248 42-309 79-348 (459)
308 PRK05965 hypothetical protein; 99.4 8.3E-11 1.8E-15 110.6 21.9 251 41-309 42-337 (459)
309 cd00611 PSAT_like Phosphoserin 99.4 8.6E-12 1.9E-16 113.8 14.7 185 61-272 8-207 (355)
310 PRK07678 aminotransferase; Val 99.4 7.2E-11 1.6E-15 110.8 21.1 250 41-309 43-334 (451)
311 PLN02724 Molybdenum cofactor s 99.4 3.5E-11 7.5E-16 120.5 19.8 208 46-272 34-277 (805)
312 PRK06105 aminotransferase; Pro 99.4 7.9E-11 1.7E-15 110.8 21.1 252 41-309 44-340 (460)
313 PRK12389 glutamate-1-semialdeh 99.4 1.2E-10 2.5E-15 108.8 21.6 245 42-309 50-316 (428)
314 PRK06082 4-aminobutyrate amino 99.4 9.7E-11 2.1E-15 110.1 20.8 247 43-309 70-343 (459)
315 PRK12403 putative aminotransfe 99.4 9.8E-11 2.1E-15 110.1 20.7 250 42-309 51-341 (460)
316 PRK06943 adenosylmethionine--8 99.4 1.2E-10 2.6E-15 109.2 21.2 250 42-309 51-343 (453)
317 PRK13360 omega amino acid--pyr 99.4 1.9E-10 4.2E-15 107.6 21.9 251 41-309 42-337 (442)
318 PRK05639 4-aminobutyrate amino 99.4 1.3E-10 2.8E-15 109.2 20.6 248 42-309 50-335 (457)
319 PRK00615 glutamate-1-semialdeh 99.3 1.2E-10 2.7E-15 108.5 19.3 247 41-309 49-317 (433)
320 PRK07046 aminotransferase; Val 99.3 3.2E-10 6.9E-15 106.4 22.1 233 43-309 73-339 (453)
321 COG0001 HemL Glutamate-1-semia 99.3 2.6E-10 5.6E-15 103.2 20.1 238 41-309 49-316 (432)
322 PRK06062 hypothetical protein; 99.3 2.1E-10 4.6E-15 107.6 20.3 250 41-309 49-331 (451)
323 PRK06149 hypothetical protein; 99.3 2.7E-10 5.9E-15 116.1 22.4 244 43-309 583-860 (972)
324 PRK09221 beta alanine--pyruvat 99.3 2.9E-10 6.2E-15 106.6 20.8 252 41-309 45-340 (445)
325 PRK07481 hypothetical protein; 99.3 3.8E-10 8.3E-15 105.9 21.6 253 41-309 38-335 (449)
326 PRK07480 putative aminotransfe 99.3 2.9E-10 6.3E-15 106.8 20.8 252 41-309 46-338 (456)
327 PRK03080 phosphoserine aminotr 99.3 2.3E-11 4.9E-16 111.9 12.8 191 47-272 13-209 (378)
328 PF06838 Met_gamma_lyase: Meth 99.3 1.6E-10 3.6E-15 101.5 17.2 177 92-290 55-249 (403)
329 PF00202 Aminotran_3: Aminotra 99.3 3.2E-11 7E-16 109.1 13.4 250 42-309 13-291 (339)
330 PRK15399 lysine decarboxylase 99.3 4.2E-10 9.1E-15 109.0 21.3 171 82-270 189-379 (713)
331 PRK05630 adenosylmethionine--8 99.3 2.4E-10 5.2E-15 106.4 19.0 249 41-309 36-322 (422)
332 PRK06916 adenosylmethionine--8 99.3 4.4E-10 9.6E-15 105.7 20.7 250 42-309 53-346 (460)
333 TIGR00461 gcvP glycine dehydro 99.3 3.1E-10 6.8E-15 112.6 20.5 179 80-272 516-711 (939)
334 PRK06917 hypothetical protein; 99.3 5.1E-10 1.1E-14 104.9 20.9 250 42-309 28-319 (447)
335 PRK08742 adenosylmethionine--8 99.3 7.2E-10 1.6E-14 104.4 21.6 253 41-309 60-358 (472)
336 PRK07030 adenosylmethionine--8 99.3 5.9E-10 1.3E-14 104.9 20.7 251 41-309 43-337 (466)
337 PRK07986 adenosylmethionine--8 99.3 3.1E-10 6.7E-15 105.7 18.7 250 42-309 40-325 (428)
338 PRK07036 hypothetical protein; 99.3 7.3E-10 1.6E-14 104.4 21.1 251 41-309 47-343 (466)
339 PRK15400 lysine decarboxylase 99.3 8E-11 1.7E-15 113.9 14.7 171 82-269 189-378 (714)
340 PRK06938 diaminobutyrate--2-ox 99.3 7.8E-10 1.7E-14 104.1 21.1 251 42-309 60-344 (464)
341 PRK07483 hypothetical protein; 99.3 4.7E-10 1E-14 105.0 19.3 250 42-309 27-319 (443)
342 COG0112 GlyA Glycine/serine hy 99.3 6.9E-10 1.5E-14 98.3 19.0 248 24-306 10-270 (413)
343 PRK05367 glycine dehydrogenase 99.3 5E-10 1.1E-14 112.7 20.5 170 87-271 538-722 (954)
344 TIGR00508 bioA adenosylmethion 99.3 4.5E-10 9.7E-15 104.8 18.9 246 43-309 43-328 (427)
345 PRK06173 adenosylmethionine--8 99.3 4.8E-10 1E-14 104.5 18.3 251 41-309 40-327 (429)
346 PRK06148 hypothetical protein; 99.2 5.9E-10 1.3E-14 113.9 20.3 245 43-309 622-900 (1013)
347 TIGR01364 serC_1 phosphoserine 99.2 3E-10 6.5E-15 103.2 16.4 186 63-272 3-199 (349)
348 COG1982 LdcC Arginine/lysine/o 99.2 2.3E-10 4.9E-15 106.8 15.5 188 66-269 41-243 (557)
349 PF00464 SHMT: Serine hydroxym 99.2 2.1E-10 4.5E-15 104.4 14.2 240 25-291 5-271 (399)
350 PRK05355 3-phosphoserine/phosp 99.2 4.9E-10 1.1E-14 102.2 16.4 189 61-272 12-210 (360)
351 TIGR02617 tnaA_trp_ase tryptop 99.2 6.6E-10 1.4E-14 101.3 16.3 206 44-272 40-280 (467)
352 PRK06931 diaminobutyrate--2-ox 99.2 2.7E-09 6E-14 100.3 20.9 251 42-309 55-338 (459)
353 PRK06209 glutamate-1-semialdeh 99.1 1.8E-09 4E-14 100.9 16.6 235 42-308 45-303 (431)
354 COG0161 BioA Adenosylmethionin 99.1 1.4E-09 3E-14 99.6 15.3 228 64-309 62-335 (449)
355 TIGR03811 tyr_de_CO2_Ent tyros 99.1 8.3E-09 1.8E-13 99.1 20.9 161 65-229 97-325 (608)
356 PRK12566 glycine dehydrogenase 99.1 4.8E-09 1.1E-13 103.8 18.8 175 81-270 530-722 (954)
357 KOG2862 Alanine-glyoxylate ami 99.1 2.5E-09 5.5E-14 91.7 14.4 150 109-272 67-220 (385)
358 KOG1358 Serine palmitoyltransf 99.1 4.3E-09 9.3E-14 92.9 15.1 204 43-271 92-316 (467)
359 KOG1401 Acetylornithine aminot 99.1 1.5E-08 3.2E-13 90.2 17.9 248 42-309 53-323 (433)
360 KOG1357 Serine palmitoyltransf 99.1 6.7E-10 1.4E-14 99.5 9.4 232 45-306 136-390 (519)
361 TIGR01366 serC_3 phosphoserine 99.0 3.5E-09 7.6E-14 96.8 12.2 181 61-271 12-199 (361)
362 COG1921 SelA Selenocysteine sy 99.0 1E-07 2.2E-12 85.6 20.9 222 62-309 38-267 (395)
363 TIGR00699 GABAtrns_euk 4-amino 99.0 2.6E-08 5.6E-13 93.4 16.3 247 42-309 55-363 (464)
364 PLN02974 adenosylmethionine-8- 99.0 7.4E-08 1.6E-12 95.7 20.3 231 63-309 383-706 (817)
365 KOG1402 Ornithine aminotransfe 99.0 1.2E-08 2.6E-13 88.3 12.2 236 44-309 58-322 (427)
366 PRK08297 L-lysine aminotransfe 98.9 6.4E-08 1.4E-12 90.7 18.1 251 43-309 43-340 (443)
367 TIGR03251 LAT_fam L-lysine 6-t 98.9 1.3E-07 2.7E-12 88.6 20.0 250 43-309 36-333 (431)
368 KOG1404 Alanine-glyoxylate ami 98.9 1.9E-08 4.2E-13 88.9 13.3 250 39-309 44-327 (442)
369 PRK12462 phosphoserine aminotr 98.9 2E-07 4.3E-12 84.5 18.2 198 46-272 4-212 (364)
370 COG4100 Cystathionine beta-lya 98.9 1E-07 2.2E-12 81.6 15.1 174 82-270 59-248 (416)
371 PLN02452 phosphoserine transam 98.8 1.5E-07 3.3E-12 85.8 16.3 199 45-272 6-214 (365)
372 TIGR01365 serC_2 phosphoserine 98.8 1E-07 2.2E-12 87.1 14.2 178 67-272 19-200 (374)
373 PRK05367 glycine dehydrogenase 98.7 1.6E-06 3.5E-11 87.7 20.5 150 91-272 125-286 (954)
374 PF03841 SelA: L-seryl-tRNA se 98.7 5E-08 1.1E-12 86.9 7.3 227 62-309 17-257 (367)
375 KOG1383 Glutamate decarboxylas 98.6 2.8E-06 6.1E-11 77.1 17.0 181 87-274 116-306 (491)
376 COG1003 GcvP Glycine cleavage 98.6 3.3E-06 7.2E-11 76.1 17.1 175 80-270 95-285 (496)
377 PLN02414 glycine dehydrogenase 98.6 1.8E-06 3.8E-11 87.3 16.8 183 62-272 116-314 (993)
378 COG3844 Kynureninase [Amino ac 98.6 6.2E-06 1.3E-10 71.7 16.4 205 43-272 28-244 (407)
379 KOG0629 Glutamate decarboxylas 98.3 2.2E-05 4.8E-10 70.6 14.7 196 68-272 119-336 (510)
380 KOG0628 Aromatic-L-amino-acid/ 98.3 1.1E-05 2.3E-10 73.3 12.7 173 54-230 73-278 (511)
381 COG3033 TnaA Tryptophanase [Am 98.2 1.8E-05 4E-10 69.7 10.8 138 82-227 74-229 (471)
382 PF05889 SLA_LP_auto_ag: Solub 98.1 3E-05 6.5E-10 69.9 10.6 183 92-290 57-249 (389)
383 PF02347 GDC-P: Glycine cleava 98.0 0.00046 1E-08 63.7 16.5 153 91-272 114-277 (429)
384 TIGR00461 gcvP glycine dehydro 97.8 0.0022 4.8E-08 64.8 19.5 139 62-225 77-231 (939)
385 KOG2467 Glycine/serine hydroxy 97.8 0.00086 1.9E-08 59.5 14.1 194 63-271 52-265 (477)
386 PLN02672 methionine S-methyltr 97.7 0.00077 1.7E-08 69.0 14.3 219 67-306 406-644 (1082)
387 KOG1403 Predicted alanine-glyo 97.7 0.00016 3.4E-09 62.4 7.6 226 62-309 61-326 (452)
388 COG1932 SerC Phosphoserine ami 97.2 0.0098 2.1E-07 53.1 13.4 201 45-272 4-214 (365)
389 COG0403 GcvP Glycine cleavage 97.1 0.089 1.9E-06 48.1 17.9 142 111-272 138-291 (450)
390 PRK12566 glycine dehydrogenase 95.9 0.56 1.2E-05 47.9 16.9 92 112-221 143-241 (954)
391 KOG3846 L-kynurenine hydrolase 95.6 0.33 7.2E-06 42.6 12.2 208 44-273 65-293 (465)
392 KOG2040 Glycine dehydrogenase 95.4 0.29 6.2E-06 47.2 11.9 134 86-228 577-721 (1001)
393 KOG3843 Predicted serine hydro 95.1 0.15 3.3E-06 43.7 8.5 178 103-290 69-251 (432)
394 KOG2790 Phosphoserine aminotra 94.4 1.6 3.5E-05 38.0 12.9 199 44-265 5-214 (370)
395 KOG1405 4-aminobutyrate aminot 94.1 0.17 3.6E-06 45.3 6.7 74 185-262 271-348 (484)
396 COG2102 Predicted ATPases of P 87.7 8.1 0.00017 32.5 9.9 100 112-221 3-116 (223)
397 TIGR01470 cysG_Nterm siroheme 85.6 17 0.00037 30.3 11.1 97 108-226 7-104 (205)
398 PF05368 NmrA: NmrA-like famil 85.3 12 0.00026 31.5 10.4 88 124-222 12-99 (233)
399 CHL00200 trpA tryptophan synth 82.5 32 0.0007 30.0 16.2 96 122-222 107-207 (263)
400 PLN02591 tryptophan synthase 82.2 32 0.0007 29.7 16.9 157 43-222 28-194 (250)
401 KOG2040 Glycine dehydrogenase 80.7 51 0.0011 32.6 13.0 76 131-222 202-281 (1001)
402 PF00290 Trp_syntA: Tryptophan 78.2 45 0.00098 29.0 16.6 156 44-221 37-202 (259)
403 KOG1467 Translation initiation 77.5 50 0.0011 31.3 11.6 129 85-223 323-467 (556)
404 PRK10595 SOS cell division inh 77.5 36 0.00077 27.4 10.5 83 132-219 54-136 (164)
405 KOG1201 Hydroxysteroid 17-beta 76.2 48 0.001 29.4 10.7 99 107-212 35-144 (300)
406 cd06568 GH20_SpHex_like A subg 76.2 7.8 0.00017 35.0 6.2 70 149-222 24-93 (329)
407 COG1648 CysG Siroheme synthase 76.0 38 0.00083 28.4 9.9 91 107-220 9-100 (210)
408 TIGR00623 sula cell division i 75.5 41 0.00089 27.1 9.6 82 132-219 58-140 (168)
409 COG1184 GCD2 Translation initi 74.8 58 0.0012 29.0 10.9 172 109-304 118-296 (301)
410 PF13460 NAD_binding_10: NADH( 74.1 35 0.00076 27.2 9.2 94 113-222 1-94 (183)
411 cd02742 GH20_hexosaminidase Be 72.2 9.6 0.00021 33.9 5.8 69 149-222 22-90 (303)
412 COG1105 FruK Fructose-1-phosph 70.6 57 0.0012 29.2 10.0 58 169-229 108-171 (310)
413 cd06562 GH20_HexA_HexB-like Be 70.5 9 0.0002 34.9 5.3 65 149-222 24-88 (348)
414 COG0552 FtsY Signal recognitio 69.4 43 0.00092 30.2 8.9 108 116-228 149-271 (340)
415 TIGR03573 WbuX N-acetyl sugar 69.1 73 0.0016 28.9 10.8 108 110-232 60-175 (343)
416 PF01408 GFO_IDH_MocA: Oxidore 68.8 44 0.00095 24.6 9.4 21 202-222 98-118 (120)
417 TIGR00262 trpA tryptophan synt 68.7 78 0.0017 27.4 19.0 158 44-223 37-204 (256)
418 cd06570 GH20_chitobiase-like_1 68.0 15 0.00032 32.9 6.0 63 149-222 24-86 (311)
419 PRK10886 DnaA initiator-associ 66.1 57 0.0012 27.0 8.7 41 176-223 102-142 (196)
420 TIGR00290 MJ0570_dom MJ0570-re 65.7 72 0.0016 27.1 9.3 98 113-221 4-115 (223)
421 PRK05678 succinyl-CoA syntheta 65.5 89 0.0019 27.7 10.3 76 143-230 52-129 (291)
422 PF02662 FlpD: Methyl-viologen 65.2 22 0.00048 27.0 5.7 48 170-217 38-90 (124)
423 TIGR00289 conserved hypothetic 65.1 86 0.0019 26.6 10.1 98 113-221 4-115 (222)
424 TIGR00064 ftsY signal recognit 62.5 1.1E+02 0.0023 26.8 11.8 106 120-227 86-203 (272)
425 TIGR02717 AcCoA-syn-alpha acet 61.9 46 0.00099 31.5 8.3 113 173-287 77-199 (447)
426 PF02603 Hpr_kinase_N: HPr Ser 61.8 15 0.00033 28.0 4.3 39 175-222 72-110 (127)
427 PRK04296 thymidine kinase; Pro 61.7 43 0.00094 27.4 7.3 94 121-228 18-117 (190)
428 COG0156 BioF 7-keto-8-aminopel 60.7 1.4E+02 0.0031 27.7 13.4 130 81-228 47-183 (388)
429 COG4221 Short-chain alcohol de 60.7 56 0.0012 28.1 7.7 95 112-212 7-111 (246)
430 COG0031 CysK Cysteine synthase 60.3 1.1E+02 0.0025 27.2 9.9 90 108-199 59-154 (300)
431 COG0296 GlgB 1,4-alpha-glucan 59.7 15 0.00033 36.1 4.8 32 202-233 212-243 (628)
432 KOG1465 Translation initiation 59.0 1.3E+02 0.0029 26.7 12.7 148 70-227 105-274 (353)
433 PF04392 ABC_sub_bind: ABC tra 58.7 53 0.0011 28.9 7.8 142 65-221 14-164 (294)
434 PF13407 Peripla_BP_4: Peripla 58.4 30 0.00065 29.3 6.1 66 148-222 20-85 (257)
435 smart00642 Aamy Alpha-amylase 58.3 14 0.0003 29.7 3.7 29 202-230 68-96 (166)
436 COG0373 HemA Glutamyl-tRNA red 58.1 1.6E+02 0.0035 27.5 11.3 113 92-225 161-274 (414)
437 TIGR02990 ectoine_eutA ectoine 57.8 1.2E+02 0.0027 26.0 10.2 94 119-223 107-212 (239)
438 PRK11889 flhF flagellar biosyn 56.7 1.5E+02 0.0032 27.9 10.2 97 118-227 253-363 (436)
439 PF04273 DUF442: Putative phos 56.6 33 0.00071 25.5 5.1 64 128-194 21-96 (110)
440 COG0159 TrpA Tryptophan syntha 55.6 1.4E+02 0.0031 26.0 19.2 97 120-221 108-209 (265)
441 PRK13125 trpA tryptophan synth 54.1 1.4E+02 0.003 25.5 10.6 95 122-223 89-191 (244)
442 PF14258 DUF4350: Domain of un 53.8 63 0.0014 21.4 6.5 61 147-223 9-70 (70)
443 PF04002 RadC: RadC-like JAB d 53.7 29 0.00063 26.3 4.6 49 171-220 50-103 (123)
444 PRK08265 short chain dehydroge 53.6 1.4E+02 0.0031 25.4 10.4 54 110-164 6-59 (261)
445 PLN02955 8-amino-7-oxononanoat 52.9 2.2E+02 0.0047 27.3 12.0 131 82-228 111-261 (476)
446 cd06569 GH20_Sm-chitobiase-lik 52.7 34 0.00074 32.3 5.8 74 149-222 28-115 (445)
447 cd06563 GH20_chitobiase-like T 51.9 31 0.00068 31.5 5.3 74 149-222 24-104 (357)
448 PF00128 Alpha-amylase: Alpha 51.9 14 0.0003 32.3 3.0 28 203-230 51-78 (316)
449 TIGR02873 spore_ylxY probable 49.4 1.8E+02 0.0039 25.4 12.7 69 148-221 191-261 (268)
450 COG0505 CarA Carbamoylphosphat 49.4 56 0.0012 29.7 6.2 53 136-197 180-234 (368)
451 PF02702 KdpD: Osmosensitive K 49.2 71 0.0015 26.7 6.3 102 116-222 15-121 (211)
452 PF03786 UxuA: D-mannonate deh 49.1 31 0.00068 31.3 4.7 50 173-222 13-63 (351)
453 COG0352 ThiE Thiamine monophos 48.9 66 0.0014 27.0 6.3 53 174-228 24-76 (211)
454 PTZ00323 NAD+ synthase; Provis 48.8 1.9E+02 0.0041 25.7 9.5 98 60-165 4-114 (294)
455 cd00951 KDGDH 5-dehydro-4-deox 48.5 70 0.0015 28.2 6.8 54 168-222 14-74 (289)
456 PF01902 ATP_bind_4: ATP-bindi 48.5 1.7E+02 0.0036 24.8 10.4 98 113-221 4-115 (218)
457 PRK08535 translation initiatio 48.4 2E+02 0.0044 25.7 10.8 104 109-223 119-228 (310)
458 TIGR00160 MGSA methylglyoxal s 48.1 90 0.0019 24.4 6.4 45 184-231 73-118 (143)
459 TIGR00649 MG423 conserved hypo 47.1 1.5E+02 0.0032 27.7 9.2 95 111-218 287-401 (422)
460 PF00150 Cellulase: Cellulase 46.8 70 0.0015 27.5 6.6 24 204-227 62-85 (281)
461 PF01008 IF-2B: Initiation fac 46.8 1.2E+02 0.0025 26.6 8.0 119 91-223 92-216 (282)
462 COG1088 RfbB dTDP-D-glucose 4, 46.6 2.2E+02 0.0047 25.6 11.2 117 112-233 2-137 (340)
463 PRK03906 mannonate dehydratase 46.1 53 0.0012 30.4 5.8 50 173-222 12-61 (385)
464 KOG2741 Dimeric dihydrodiol de 45.9 2.3E+02 0.0051 25.7 9.6 92 122-228 42-133 (351)
465 COG0826 Collagenase and relate 45.2 61 0.0013 29.5 6.0 46 173-218 15-63 (347)
466 PRK09441 cytoplasmic alpha-amy 45.1 25 0.00054 33.5 3.7 29 202-230 79-107 (479)
467 PLN00191 enolase 44.0 1.2E+02 0.0026 28.9 7.9 100 118-225 296-396 (457)
468 TIGR02012 tigrfam_recA protein 43.7 82 0.0018 28.4 6.5 96 131-227 80-193 (321)
469 cd06320 PBP1_allose_binding Pe 43.6 69 0.0015 27.3 6.0 68 149-224 22-89 (275)
470 KOG1209 1-Acyl dihydroxyaceton 43.2 1.2E+02 0.0026 25.8 6.8 56 109-165 6-62 (289)
471 PRK09354 recA recombinase A; P 42.9 1.3E+02 0.0028 27.5 7.7 90 132-222 86-192 (349)
472 cd00532 MGS-like MGS-like doma 42.7 1.4E+02 0.0029 22.0 10.4 97 119-225 10-107 (112)
473 PF02571 CbiJ: Precorrin-6x re 42.5 2.2E+02 0.0049 24.5 8.9 99 109-214 129-248 (249)
474 TIGR00524 eIF-2B_rel eIF-2B al 42.3 2.5E+02 0.0054 25.0 11.4 104 110-223 118-237 (303)
475 TIGR00695 uxuA mannonate dehyd 42.2 66 0.0014 29.8 5.7 48 172-222 14-61 (394)
476 TIGR00511 ribulose_e2b2 ribose 41.8 2.5E+02 0.0055 24.9 10.7 104 109-223 114-223 (301)
477 PF03460 NIR_SIR_ferr: Nitrite 41.4 23 0.00051 23.4 2.1 30 187-217 8-37 (69)
478 KOG2774 NAD dependent epimeras 41.2 2.3E+02 0.0051 24.4 9.3 114 108-232 42-166 (366)
479 PF04748 Polysacc_deac_2: Dive 41.2 2E+02 0.0044 24.1 8.2 119 89-221 73-206 (213)
480 COG2984 ABC-type uncharacteriz 40.4 2.8E+02 0.006 25.0 10.5 126 82-227 66-198 (322)
481 PRK13111 trpA tryptophan synth 39.9 2.5E+02 0.0054 24.4 18.0 96 122-222 105-205 (258)
482 PLN03244 alpha-amylase; Provis 39.6 53 0.0012 33.4 5.0 36 196-231 433-468 (872)
483 COG1587 HemD Uroporphyrinogen- 39.4 2.4E+02 0.0053 24.0 8.9 90 116-216 105-197 (248)
484 KOG0630 Predicted pyridoxal-de 39.2 67 0.0014 30.7 5.2 72 149-223 246-329 (838)
485 PRK14974 cell division protein 39.0 1.7E+02 0.0037 26.5 7.9 104 117-227 151-265 (336)
486 PF07085 DRTGG: DRTGG domain; 39.0 94 0.002 22.5 5.3 41 173-222 50-90 (105)
487 COG1312 UxuA D-mannonate dehyd 38.3 61 0.0013 29.2 4.7 46 172-220 14-59 (362)
488 PRK05562 precorrin-2 dehydroge 38.2 2.5E+02 0.0054 23.8 11.1 94 109-225 24-119 (223)
489 PF00728 Glyco_hydro_20: Glyco 38.1 33 0.00072 30.9 3.3 68 149-222 24-91 (351)
490 COG1606 ATP-utilizing enzymes 37.9 2.7E+02 0.0059 24.2 8.4 96 113-228 21-124 (269)
491 PLN00196 alpha-amylase; Provis 37.8 39 0.00085 31.8 3.7 29 202-230 90-118 (428)
492 PRK10416 signal recognition pa 37.7 3E+02 0.0066 24.7 12.6 106 120-228 128-246 (318)
493 TIGR03815 CpaE_hom_Actino heli 37.7 3E+02 0.0064 24.5 11.9 56 171-227 160-215 (322)
494 TIGR00608 radc DNA repair prot 37.2 82 0.0018 26.6 5.2 48 172-220 146-198 (218)
495 PF11802 CENP-K: Centromere-as 37.2 2.3E+02 0.0051 24.7 7.9 54 120-177 212-266 (268)
496 PRK11070 ssDNA exonuclease Rec 37.2 4.2E+02 0.0091 26.1 11.5 100 117-227 53-161 (575)
497 TIGR02313 HpaI-NOT-DapA 2,4-di 36.8 2E+02 0.0044 25.4 7.9 35 112-147 71-108 (294)
498 PRK13937 phosphoheptose isomer 36.6 2.3E+02 0.005 23.0 8.2 36 180-222 103-138 (188)
499 PLN00125 Succinyl-CoA ligase [ 36.2 3.2E+02 0.0068 24.4 9.9 80 139-230 52-134 (300)
500 TIGR02402 trehalose_TreZ malto 36.1 67 0.0015 31.3 5.1 29 202-230 158-186 (542)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-51 Score=351.78 Aligned_cols=299 Identities=56% Similarity=0.993 Sum_probs=286.6
Q ss_pred cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547 8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87 (311)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~ 87 (311)
.|+.+-|..+++ +....||.++..+.......+.+++|.+++|+|..|+++++.++..+|+.+++.++.+++|+|+.
T Consensus 27 ~W~f~gs~~a~k---a~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~ 103 (447)
T KOG0259|consen 27 VWRFKGSDAAKK---AASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSV 103 (447)
T ss_pred ceeeccchhhhh---hccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCcc
Confidence 499999988888 89999999999988777655567999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 167 (311)
|+...|+++|+|+++...-.+++++|++|+|.++|+++++.+|.+|| ..||+|+|+|+-|...+...|+++..+++.++
T Consensus 104 G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~-aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe 182 (447)
T KOG0259|consen 104 GILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPG-ANILLPRPGFPLYDTRAIYSGLEVRYYDLLPE 182 (447)
T ss_pred ccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCC-CceecCCCCCchHHHhhhhcCceeEeecccCc
Confidence 99999999999999988888999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC
Q 021547 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP 247 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~ 247 (311)
.+|.+|++.+|.+++++|.++++.||+||+|.+++.+.|++|+++|++++++||.||+|+.+.|++.++.++..+....+
T Consensus 183 ~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP 262 (447)
T KOG0259|consen 183 KDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP 262 (447)
T ss_pred ccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 248 VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 248 ~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+|.++|+||.|-.||||+||++.+|+..+++..++++.++.+.+....++++.|.|+-.+|+.
T Consensus 263 VitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 263 VITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK 325 (447)
T ss_pred eEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh
Confidence 999999999999999999999999999999988888999999988899999999999998864
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-48 Score=360.46 Aligned_cols=301 Identities=61% Similarity=1.087 Sum_probs=263.2
Q ss_pred cccccccchHH-hhHHHHhhhhhHHHHHHHHHhhhccCC-CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC
Q 021547 6 EKKWGFEVKQE-LNREREAEVAAFRYAIVSLMESVDKND-PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY 83 (311)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y 83 (311)
.+.|....++. ... .....++..+..+.+.+.+.. +.++|+|++|+|..++.+++++.+.+++.+.+..+....|
T Consensus 14 ~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y 90 (430)
T PLN00145 14 TARWRFERANAALAA---AGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSY 90 (430)
T ss_pred cccccccCchhhHHH---hcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCC
Confidence 58899999875 333 444568888877777765553 7899999999999998899999999999999887666689
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547 84 APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163 (311)
Q Consensus 84 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 163 (311)
++..|.+++|+++++++++.+|.++++++|++|+|+++++.+++.++.++| |+|+++.|+|+.|...+...|.+++.++
T Consensus 91 ~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~~~ 169 (430)
T PLN00145 91 STCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPG-ANILLPRPGYPLYEARAVFSGLEVRHFD 169 (430)
T ss_pred CCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEee
Confidence 998999999999999999988999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
+.++++|.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++.++.++..+.
T Consensus 170 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 170 LLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 87777899999999999999999999999999999999999999999999999999999999999998776666766666
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
...++|+++||||.|++||+|+||++++++..+++..+++..++.+.....+++.+.|.++..+|++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred ccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 6678999999999999999999999987765444333445666666665567789999999999874
No 3
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.4e-48 Score=363.22 Aligned_cols=301 Identities=50% Similarity=0.924 Sum_probs=261.9
Q ss_pred ccccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC
Q 021547 3 NEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82 (311)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~ 82 (311)
++..+.|+...++.++. .....||.+...+++...++..+++|+|++|+|+.+|.+.+++.+.+++.+.+..+....
T Consensus 27 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~ 103 (462)
T PLN02187 27 NGQSSVWRFGGSDKAAK---ASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNS 103 (462)
T ss_pred cccccccccCcchhhhh---hhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Confidence 44556799999988888 776789999888877777677899999999999988888899999999999887666668
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEe
Q 021547 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162 (311)
Q Consensus 83 Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~ 162 (311)
|.+..|.+++|+++++++++.+++++++++|++|+|+++++.+++.+++++| |+|+++.|+|+.|...++..|.+++.+
T Consensus 104 Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~~ 182 (462)
T PLN02187 104 YGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPN-ANILLPRPGFPHYDARAAYSGLEVRKF 182 (462)
T ss_pred CCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCC-CEEEEeCCCCccHHHHHHHcCCEEEEE
Confidence 9999999999999999999888999999999999999999999999999999 999999999999999999999999999
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
++.+++++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++.++.++..+
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~ 262 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKF 262 (462)
T ss_pred eCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHh
Confidence 98666789999999999998899999999999999999999999999999999999999999999999977666566666
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh---hhccccCCCchhHHHHHhhhhc
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA---CLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
....++|+++||||.|++||+|+||+++++++..+ ++++.+.. ..+.+.+++.++|.+++++|++
T Consensus 263 ~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~ 330 (462)
T PLN02187 263 ASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEK 330 (462)
T ss_pred ccCCcEEEEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence 55567999999999999999999999987654222 12233333 3333446689999999999864
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-47 Score=351.43 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=229.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~ 123 (311)
.++|+|++|+|+ +++|+.+.+++.+++..+.. .|.+..|.++||+++++++.+++|..+.+++ |++|+|+++|+
T Consensus 28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 689999999975 78899999999999886644 6779999999999999999999999898877 99999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |+|++++|.|+.|...++..|.+++.+++... ++|.+|.+.|++.+++++|++++++||||||.+++
T Consensus 103 ~~~~~a~~~pG-DeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~ 181 (393)
T COG0436 103 FLAFLALLNPG-DEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYS 181 (393)
T ss_pred HHHHHHhcCCC-CEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCC
Confidence 99999999999 99999999999999999999999999997655 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
++++++|+++|++||++||.||+|..+.|++..+.++..+.. .+++|++.||||.|+++|||+||++++++ .
T Consensus 182 ~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~-------~ 254 (393)
T COG0436 182 KEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE-------E 254 (393)
T ss_pred HHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChH-------H
Confidence 999999999999999999999999999999865566555554 46899999999999999999999998753 3
Q ss_pred HHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.+.... ....+++.++|.++.++|+.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~ 284 (393)
T COG0436 255 LIAALRKLKSYLTSCAPTPAQYAAIAALNG 284 (393)
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence 777777554 45679999999999999985
No 5
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.7e-46 Score=342.81 Aligned_cols=282 Identities=61% Similarity=1.049 Sum_probs=240.2
Q ss_pred HHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC
Q 021547 28 FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107 (311)
Q Consensus 28 i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~ 107 (311)
|+..+..+.+.+....++++|+|+.|+|+.|..+++++.+.+++.+.+.......|.++.|.+++|+++++++++++|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 44444444444555678999999999988666689999999999998876666679998999999999999999988999
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+++++|++|+|+++++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++.+++++.+|++.+++++++++++
T Consensus 95 ~~~~~I~it~G~~~al~~~~~~l~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 173 (409)
T PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPE-ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIA 173 (409)
T ss_pred CCHhhEEEecChHHHHHHHHHHHcCCC-CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEE
Confidence 999999999999999999999999999 9999999999999999999999999998865667889999999988888999
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
+++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++.++.++..++...++|+++||||.|++||+|+||
T Consensus 174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence 99999999999999999999999999999999999999999998765555555565566899999999999999999999
Q ss_pred EEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 268 LATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++++...+..++++.+........+++.++|.+++++|++
T Consensus 254 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 296 (409)
T PLN00143 254 LVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEK 296 (409)
T ss_pred EEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhc
Confidence 9986654333222234555544433345688999999998864
No 6
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=4.1e-45 Score=338.77 Aligned_cols=282 Identities=62% Similarity=1.087 Sum_probs=243.8
Q ss_pred HHHHHHHHHhhh-ccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCC
Q 021547 28 FRYAIVSLMESV-DKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106 (311)
Q Consensus 28 i~~~~~~~~~~~-~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~ 106 (311)
++..+..+++.+ .+.+++++|+|+.|+|+..+.+++++.+.+++.+++..+...+|.+..|.+++|+++++++++.+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 92 (409)
T PLN02656 13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY 92 (409)
T ss_pred hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 555555555444 3346899999999999866668899999999999888766678999999999999999999998899
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 186 (311)
.+++++|++|+|+++++..++.+++++| |+|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.++++++
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPG-ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV 171 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCC-CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence 9999999999999999999999999999 999999999999999999999999999986666788999999999988999
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
++++++|+||||.+++.+++++|+++|+++|++||+|++|..+.|++.++.++..++...++|+++||||.|++||+|+|
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG 251 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG 251 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence 99999999999999999999999999999999999999999999987655565555556689999999999999999999
Q ss_pred EEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 267 WLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+++++++..+..++++++++.......+++.++|.+++++|++
T Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 295 (409)
T PLN02656 252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQ 295 (409)
T ss_pred EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhc
Confidence 99997543332223577887776554456789999999999864
No 7
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.3e-43 Score=337.44 Aligned_cols=291 Identities=21% Similarity=0.369 Sum_probs=239.1
Q ss_pred ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 021547 9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88 (311)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g 88 (311)
|...+|++.+. -..+.++.+.. .++.++ ..+.++|+|+.|+|..+ .+++|+.+.+++.+.+.. ..+|++..|
T Consensus 115 ~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~-~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G 186 (517)
T PRK13355 115 RTFKKSHKLDN---VLYDVRGPVVD-EANRME-AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKG 186 (517)
T ss_pred cCCChhHHhhc---cCccHHHHHHH-HHHHHH-HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcC
Confidence 66667777666 34443333433 233332 24789999999998644 367789999999887753 347999999
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER 168 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (311)
..+||++++++++.+.+.++++++|++|+|+++++.+++.+++++| |+|+++.|+|+.|...++..|.+++.++++.++
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~G-d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~ 265 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDG-DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQS 265 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCC-CEEEEcCCCCcCHHHHHHHCCCEEEEeecCccc
Confidence 9999999999998877667899999999999999999999999999 999999999999999999999999999887777
Q ss_pred CcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 169 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
+|.+|++++++.++++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.|++.++.++..+..+..+
T Consensus 266 ~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~v 345 (517)
T PRK13355 266 EWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFC 345 (517)
T ss_pred CCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeE
Confidence 89999999999999899999999999999999999999999999999999999999999999987666666666554467
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+++||||.|+++|+|+||++++.+.... .++++.+........+++.++|.++.++|++
T Consensus 346 i~~~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~ 405 (517)
T PRK13355 346 VTFSGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGG 405 (517)
T ss_pred EEEecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcC
Confidence 88999999999999999999976443221 1245555444444457889999999988853
No 8
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-43 Score=326.12 Aligned_cols=293 Identities=31% Similarity=0.593 Sum_probs=240.2
Q ss_pred cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547 8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87 (311)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~ 87 (311)
+|..+-+++...--.+....+++++. ...++++|+|+.|.|...+.+.+++.+.+++.+.+......+|+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~ 75 (412)
T PTZ00433 3 FWDVSMSKHAGRVFNPLRTVTDNAKP-------SPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTV 75 (412)
T ss_pred cccccccHHHHhhhccHHHHHHhhcc-------CCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCC
Confidence 56666665555511122333333322 12578999999999875444667899999999888765566899989
Q ss_pred CcHHHHHHHHHHHhhcC------CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547 88 GLPLARRAVAEYLNRDL------PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~------g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~ 161 (311)
|.++||+++++++++.+ |..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|.+++.
T Consensus 76 G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~ 154 (412)
T PTZ00433 76 GSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEG-DNILVPAPGFPHYETVCKAYGIEMRF 154 (412)
T ss_pred CcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCC-CEEEEccCCcccHHHHHHHcCCEEEE
Confidence 99999999999998754 467889999999999999999999999999 99999999999999999999999999
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
+++..+.++++|++++++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.|++..+.++..
T Consensus 155 i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 234 (412)
T PTZ00433 155 YNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVAD 234 (412)
T ss_pred EecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhh
Confidence 99876667899999999988888999999999999999999999999999999999999999999999887655555666
Q ss_pred cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++...++|+++||||.|++||+|+||++++++.... +++++.++.......++++++|.+++++|++
T Consensus 235 ~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 235 FDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG--GDFLDGMKRLGMLVCGPCSVVQAALGEALLN 301 (412)
T ss_pred ccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccH--HHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence 655557899999999999999999999985442211 2367777666544457899999999988864
No 9
>PLN02368 alanine transaminase
Probab=100.00 E-value=3e-43 Score=324.19 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=217.6
Q ss_pred CCCCeeecCCCCCCC-------CC-------------------CCCCcHHHHHHHHHHHh-cCCCCCCCCCCCcHHHHHH
Q 021547 43 DPRPVIPLGHGDPAA-------FP-------------------CFRTAAVAEDAIVDSVR-SSMFNCYAPMFGLPLARRA 95 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~-------~~-------------------~~~~~~~~~~a~~~~~~-~~~~~~Y~~~~g~~~lr~~ 95 (311)
.+.++|+|++|+|+. ++ .+.+++.+.+++..... .....+|++..|.++||++
T Consensus 36 ~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a 115 (407)
T PLN02368 36 EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE 115 (407)
T ss_pred HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence 478999999999862 10 01256666666654322 2345689999999999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL 174 (311)
Q Consensus 96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 174 (311)
+++|+++++|+.+++++|++|+|+++++..++.+++ ++| |.|++++|+|+.|...++..|.+++.+++..+++|.+|+
T Consensus 116 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pG-d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~ 194 (407)
T PLN02368 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEK-DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDV 194 (407)
T ss_pred HHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCC-CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 999999988998999999999999999999999997 699 999999999999999999999999999987777789999
Q ss_pred HHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCccccc----C
Q 021547 175 EAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVF----G 243 (311)
Q Consensus 175 ~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~----~ 243 (311)
+.+++.+++ +++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++. ++.++..+ +
T Consensus 195 ~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~ 274 (407)
T PLN02368 195 NNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMG 274 (407)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhc
Confidence 999998763 689999999999999999999999999999999999999999999999764 44443222 1
Q ss_pred ----CCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 244 ----SIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 244 ----~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
..+++|+++||||.| +++|+|+||+++.+.. +++++.+.......+++|.++|+++.++|++
T Consensus 275 ~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-----~~li~~~~~~~~~~~~~~~~~Q~aa~~~l~~ 341 (407)
T PLN02368 275 PPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-----PKTVEEIYKVASIALSPNVSGQIFMGLMVNP 341 (407)
T ss_pred ccccccceEEEEecCCcccccCCccceEEEEEeCCC-----HHHHHHHHHHhcccCCCCcHHHHHHHHHhCC
Confidence 245899999999998 8999999999962110 2477777776544567899999999998863
No 10
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.7e-42 Score=319.46 Aligned_cols=283 Identities=52% Similarity=0.937 Sum_probs=241.6
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 103 (311)
....|+++.+.+.+.. ..+.++|+|+.|+|..+|.+++++.+.+++.+.+.......|.+..|..++|++++++++..
T Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 89 (403)
T TIGR01265 12 TVNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD 89 (403)
T ss_pred HHHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 4456777776654431 24689999999999877788999999999999887655568988899999999999999987
Q ss_pred CCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+++.+.+++|++|+|+++++.+++.+++.+| |+|+++.|+|..+...++..|.+++.+++.+.+++.+|++.+++.+++
T Consensus 90 ~~~~~~~~~ii~t~G~t~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 168 (403)
T TIGR01265 90 LPGKLTADDVVLTSGCSQAIEICIEALANPG-ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE 168 (403)
T ss_pred cCCCCCHHHEEEecChHHHHHHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc
Confidence 8888899999999999999999999999999 999999999999999999999999999876666788999999999888
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+++++++++|+||||.+++.+++++|+++|+++|++||+|++|+++.+++.++.++..++...++|+++||||.|++||+
T Consensus 169 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 248 (403)
T TIGR01265 169 KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW 248 (403)
T ss_pred CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcc
Confidence 89999999999999999999999999999999999999999999999877665666667666689999999999999999
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||+++++++..+. +++++.++.+.....+++.++|.+++.+|++
T Consensus 249 RiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 294 (403)
T TIGR01265 249 RLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILEN 294 (403)
T ss_pred eEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Confidence 999999976532221 1245556555444457899999999998863
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.7e-42 Score=323.19 Aligned_cols=265 Identities=25% Similarity=0.339 Sum_probs=219.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++++|+.|+|..+ .+++|+.+.+++.+.+......+|.+..|.++||+++++|+++++|+.+++++|++|+|++++
T Consensus 30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 4678999999998543 478899999999988765556689999999999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCcc
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESF-AKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGN 199 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~ 199 (311)
+..++. ++.+| |.|+++.|+|+.|... ....|.+++.++++++++|.+|+++|++.++ ++++++++++|+||||.
T Consensus 109 l~~~~~-l~~~G-d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~ 186 (433)
T PRK06855 109 IAKIYG-LLRRE-ARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA 186 (433)
T ss_pred HHHHHH-hcCCC-CeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence 999985 78899 9999999999998754 3456888898888666778899999999886 46789999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+++.+++++|+++|++||++||+||+|..+.|++.++.++..+..+.++|+++||||.|++||+|+||+++++....-..
T Consensus 187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~ 266 (433)
T PRK06855 187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF 266 (433)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence 99999999999999999999999999999998776556666655445689999999999999999999998642100000
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
..+++.+........+++.++|.+++++|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~ 297 (433)
T PRK06855 267 KKYINSILNAKMIEVCSTTLPQMAIPRIMSH 297 (433)
T ss_pred HHHHHHHHHhhccccCCChHHHHHHHHhhcC
Confidence 1234444444333456789999999999875
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.3e-42 Score=320.38 Aligned_cols=265 Identities=25% Similarity=0.415 Sum_probs=228.0
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
...+.++++.... ...++|+|+.|.|+ +++++.+.+++.+.+..+ ..+|+++.|.++||+++++++++
T Consensus 39 ~~~~~~~~~~~~~-------~~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~ 106 (413)
T PLN00175 39 FKTTIFTQMSSLA-------IKHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKK 106 (413)
T ss_pred CCCCHHHHHHHHh-------hcCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHH
Confidence 4555566655432 24589999999976 566889999999888753 45899999999999999999999
Q ss_pred cCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 103 DLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 103 ~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
.+|+.++++ +|++|+|+++++..++.+++++| |+|++++|+|..|...++..|.+++.+++.++ ++.+|++.|++.+
T Consensus 107 ~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~ 184 (413)
T PLN00175 107 DTGLVVDPEKEVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAF 184 (413)
T ss_pred HhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhc
Confidence 889888887 79999999999999999999999 99999999999999999999999999998543 4789999999999
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCC
Q 021547 182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIV 260 (311)
Q Consensus 182 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~ 260 (311)
.++++++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.|++. +.++..++. .+++|+++||||.|++
T Consensus 185 ~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~ 263 (413)
T PLN00175 185 TSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSL 263 (413)
T ss_pred CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccC
Confidence 88999999999999999999999999999999999999999999999988653 335555543 4689999999999999
Q ss_pred CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 261 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
||+|+||++++. ++++.+..... ...++|.++|.+++++|++
T Consensus 264 ~G~RiG~~v~~~--------~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~ 306 (413)
T PLN00175 264 TGWKIGWAIAPP--------HLTWGVRQAHSFLTFATATPMQWAAVAALRA 306 (413)
T ss_pred cchheeeeEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 999999999853 47777776643 4578899999999999875
No 13
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-42 Score=316.72 Aligned_cols=271 Identities=21% Similarity=0.289 Sum_probs=228.1
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 103 (311)
..+.++++.....+. +..++++|+|+.|+|. +++++.+.+++.+.+......+|. +.|..++|++++++++++
T Consensus 13 ~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~ 85 (399)
T PRK07681 13 QSSIFSELGAYKKEK--IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNT 85 (399)
T ss_pred CccHHHHHHHHHHHh--hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHH
Confidence 444555554433221 1246789999999965 566888999998877543333455 479999999999999998
Q ss_pred CCCCCCC-CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 104 LPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 104 ~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
+|+.+++ ++|++|+|+++++..++.+++++| |+|+++.|+|+.|...++..|.+++.++++.++++.+|++.+++.+.
T Consensus 86 ~g~~~~~~~~I~it~G~~~al~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 164 (399)
T PRK07681 86 HNVILNADKEVLLLMGSQDGLVHLPMVYANPG-DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA 164 (399)
T ss_pred hCCCCCCCCeEEECCCcHHHHHHHHHHhCCCC-CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 9999998 899999999999999999999999 99999999999999999999999999998666678899999999888
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~ 261 (311)
++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++.++.++..++. .+++|+++||||.|++|
T Consensus 165 ~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (399)
T PRK07681 165 DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLA 244 (399)
T ss_pred ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 88999999999999999999999999999999999999999999999887655555555543 35799999999999999
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+|+||++++. ++++.+..... ..++++.++|.++.++|++
T Consensus 245 GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 286 (399)
T PRK07681 245 GSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRN 286 (399)
T ss_pred cceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 99999998743 47888877654 4568899999999999875
No 14
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=304.00 Aligned_cols=247 Identities=27% Similarity=0.417 Sum_probs=221.4
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHH
Q 021547 50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILT 128 (311)
Q Consensus 50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~ 128 (311)
|+.|.|+ +++|..+.++++.+......++|.+..|+++|++++++.+...+|....+ ++|++|.|+.+++..++.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999854 89999999999999988778899999999999999999999978765555 569999999999999999
Q ss_pred HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc------CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 129 VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL------PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 129 ~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+++++| |+|++.+|.|..|....+..|...+.+++. ..++|.+|.++++..+++++|+|++++||||||.+++
T Consensus 112 ~l~~~G-DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfs 190 (420)
T KOG0257|consen 112 GLLNPG-DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFS 190 (420)
T ss_pred HHcCCC-CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccC
Confidence 999999 999999999999999999999999999987 4577999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
+++|++|+++|++||+++|+||+|..+.|++..+..+..+.. .+++|.++|+||+|++.|||+||++++. .
T Consensus 191 ReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~ 262 (420)
T KOG0257|consen 191 REELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------H 262 (420)
T ss_pred HHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------H
Confidence 999999999999999999999999999999887777776633 4489999999999999999999999833 2
Q ss_pred HHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 282 IVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++..+... .+....+++..|.|.++.+.
T Consensus 263 L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 263 LYSALFPVHQNFVFTCPTPIQEASAAAFA 291 (420)
T ss_pred hhhhHHHHhhccccccCcHHHHHHHHHHh
Confidence 55665555 45667788888999887765
No 15
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.1e-41 Score=314.06 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=217.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++|+|+.|+|+ ++.++.+.+++.+.+.......|++..|.++||+++++++++.+|.+++++ +|++|+|+++
T Consensus 30 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~ 105 (389)
T PRK08068 30 EGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKA 105 (389)
T ss_pred cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 35789999999875 456778899998887655566899889999999999999998889888888 8999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |.|++++|+|..|...++..|.+++.++++.+.++.+|.+++++.++++++++++++||||||.++
T Consensus 106 ~l~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 106 GLVELPQCLMNPG-DTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVA 184 (389)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcC
Confidence 9999999999999 999999999999999999999999999986556788999999998888899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc-cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV-FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|+++|++||+||+|+.+.|++..+.++.. .+..+++|+++||||.|++||+|+||++++.
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-------- 256 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE-------- 256 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH--------
Confidence 9999999999999999999999999998887543333322 2334578999999999999999999999743
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++++.|.+++++|.+
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 287 (389)
T PRK08068 257 SVIEAINLLQDHLFVSLFGAIQDAAIEALLS 287 (389)
T ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence 47788777654 3345566678888877753
No 16
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.6e-41 Score=314.27 Aligned_cols=280 Identities=37% Similarity=0.729 Sum_probs=232.2
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 104 (311)
...++.++.... ... ..++++++|+.|.|..+..+++++.+.+++.+.+.......|.+..|..++|+++++++.+ .
T Consensus 13 ~~~~~~~~~~~~-~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~ 89 (401)
T TIGR01264 13 VNPIRAIVDNMK-VKP-NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-P 89 (401)
T ss_pred hhHHHHHHHHHH-hhh-hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-c
Confidence 334666554322 211 1347889999999864445788999999999988765556799989999999999999987 4
Q ss_pred CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
+..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|++++.+++..++++++|++.+++.++++
T Consensus 90 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~ 168 (401)
T TIGR01264 90 DGPIEADDVVLCSGCSHAIEMCIAALANAG-QNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK 168 (401)
T ss_pred CCCCCHHHEEECcChHHHHHHHHHHhCCCC-CEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC
Confidence 557889999999999999999999999999 9999999999999999999999999998866667889999999988888
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+....++|+++||||.|++||+|
T Consensus 169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 169 TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccce
Confidence 99999999999999999999999999999999999999999999998765556666665555699999999999999999
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+||++++++...+ .++++.++.......++++++|.+++++|++
T Consensus 249 iG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 292 (401)
T TIGR01264 249 LGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLR 292 (401)
T ss_pred EEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHh
Confidence 9999987543111 1255555555433456789999999999864
No 17
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.5e-41 Score=312.76 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=222.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++++|+.|+|. +++++.+.+++.+.+......+|+++.|.+++|+++++|+++.+|+++.++ +|++|+|+++
T Consensus 27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 36899999999965 566888999998877654556899999999999999999998888888776 6999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++|+||||.++
T Consensus 103 ~l~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~ 181 (383)
T TIGR03540 103 GIAHIPLAFVNPG-DIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVA 181 (383)
T ss_pred HHHHHHHHhCCCC-CEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccC
Confidence 9999999999999 999999999999999999999999999987666788899999998888999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|++||++||+||+|..+.|++..+.++..++. ..++|+++||||.||+||+|+||++++.
T Consensus 182 ~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~-------- 253 (383)
T TIGR03540 182 PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA-------- 253 (383)
T ss_pred CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------
Confidence 9999999999999999999999999999887655556555543 3578999999999999999999998743
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++++..... ...+++.+.|.+++++|++
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (383)
T TIGR03540 254 DLIAGLGKVKTNVDSGVFQAIQYAAIAALNG 284 (383)
T ss_pred HHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 47777776643 3456788899999998865
No 18
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.2e-41 Score=313.75 Aligned_cols=253 Identities=16% Similarity=0.214 Sum_probs=214.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.+.++|+|+.|+|. +++++.+.+++.+.+......+|++..|.++||+++++++.+.+|++++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~ 103 (388)
T PRK07366 28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence 47789999999864 677889999999887655556899989999999999999999889999998 6999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++||||||.++
T Consensus 104 al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~ 182 (388)
T PRK07366 104 GTAHLPLAVLNPG-DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIA 182 (388)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccC
Confidence 9999999999999 999999999999999999999999999987666788899999887777899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC-CCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-YIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~-~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+.+++++|+++|++||++||+||+|..+.|++.. ..++..++.. .++|+++||||.||+||+|+||++++.
T Consensus 183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~------- 255 (388)
T PRK07366 183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA------- 255 (388)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH-------
Confidence 9999999999999999999999999999887643 4445555443 468999999999999999999999743
Q ss_pred hhHHHHHhhhhcc-ccCC-CchhHHHHHhhh
Q 021547 280 SGIVGSIKACLGV-RSGP-STLIQVCEMFLL 308 (311)
Q Consensus 280 ~~~~~~~~~~~~~-~~~~-~~~~q~~~~~~l 308 (311)
++++++...... ..+. +.+.|.+++.+.
T Consensus 256 -~li~~l~~~~~~~~~~~~~~~~~~a~~~l~ 285 (388)
T PRK07366 256 -QLIQALRQVKAVVDFNQYRGILNGAIAALT 285 (388)
T ss_pred -HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 477887776542 2233 334455555543
No 19
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-41 Score=314.72 Aligned_cols=255 Identities=21% Similarity=0.269 Sum_probs=221.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a 122 (311)
+.+.|+|++|+|.. +++++.+.+++.+.+.......|++..|.++||+++++++++.+|+.+++ ++|++|+|++++
T Consensus 38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 57889999999762 35667888888888765555689999999999999999999988988888 899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc---CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL---PERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~ 199 (311)
+..++.+++++| |+|+++.|+|+.+...++..|.+++.++++ .+.++.+|++.|++.++++++++++++|+||||.
T Consensus 115 l~~~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~ 193 (405)
T PRK06207 115 LFLAVAATVARG-DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGV 193 (405)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCc
Confidence 999999999999 999999999999999999999999999875 2346889999999998888999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
+++.+++++|+++|+++|++||+||+|..+.|++.++.++..+. ..+++|+++||||.|++||+|+||++++.
T Consensus 194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~------ 267 (405)
T PRK06207 194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP------ 267 (405)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH------
Confidence 99999999999999999999999999999998776555544443 24689999999999999999999998753
Q ss_pred hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++++..... ...+.+.++|.++.++|++
T Consensus 268 --~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 298 (405)
T PRK06207 268 --AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE 298 (405)
T ss_pred --HHHHHHHHHHhHhccCCCHHHHHHHHHHHhC
Confidence 47787777644 3456788999999999864
No 20
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-41 Score=312.45 Aligned_cols=255 Identities=20% Similarity=0.322 Sum_probs=219.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++++|+.|+|. .+.++.+.+++.+.+.......|+++.|.++||+++++|+++++|++++++ +|++|+|+++
T Consensus 33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 46779999999875 345676777777666554556899999999999999999998888888888 4899999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.++
T Consensus 109 al~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~ 187 (394)
T PRK05942 109 GLTHLALAYVNPG-DVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATA 187 (394)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcC
Confidence 9999999999999 999999999999998889999999999986666788999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++|+++||||.|++||+|+||++++.
T Consensus 188 s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~-------- 259 (394)
T PRK05942 188 PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR-------- 259 (394)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------
Confidence 9999999999999999999999999999887655555554543 3467999999999999999999998743
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++.... ...+++.++|.++..+|+.
T Consensus 260 ~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 290 (394)
T PRK05942 260 HIIQGLRTLKTNLDYGIFSALQKAAETALQL 290 (394)
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 47888887653 3457788999999998863
No 21
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-41 Score=309.94 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=221.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++++|+.|+|. +++++.+.+++.+.+.......|++..|.+++|+++++|+++.+|+.++++ +|++|+|+++
T Consensus 29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 36789999999865 566788999999887654556899999999999999999998888888887 5999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++|+||||.++
T Consensus 105 ~i~~~~~~~~~~g-d~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~ 183 (385)
T PRK09276 105 GIAHIPLAFVNPG-DVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVA 183 (385)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCC
Confidence 9999999999999 999999999999999999999999999986666788999999988888899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|++||++||+||+|..+.|++....++..++. .+++|+++||||.||+||+|+||++++.
T Consensus 184 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~-------- 255 (385)
T PRK09276 184 DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA-------- 255 (385)
T ss_pred CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------
Confidence 9999999999999999999999999999887655555555543 3578999999999999999999999753
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++.+.|.+++++|++
T Consensus 256 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 286 (385)
T PRK09276 256 DLIAGLGKVKSNVDSGVFQAIQEAGIAALNG 286 (385)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHcC
Confidence 37777776643 3456777889999988864
No 22
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=310.09 Aligned_cols=269 Identities=22% Similarity=0.330 Sum_probs=229.0
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
.....+.++.....+.. ..++++++|+.|.|. +++++.+.+++.+.+.... ..|.++.|.+++|+++++++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 12 IEPFHVMALLARANELE--AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAGFYAQ 84 (387)
T ss_pred CCchHHHHHHHHHHHHH--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHHHHHH
Confidence 45556666665443321 246789999999964 6678999999998887443 4798889999999999999999
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
++|+++++++|++|+|+++++..++.+++++| |+|++++|+|+.+...++..|.+++.++++.+.++.+|++.+++.++
T Consensus 85 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 163 (387)
T PRK08960 85 RYGVDVDPERILVTPGGSGALLLASSLLVDPG-KHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN 163 (387)
T ss_pred HhCCCCChhhEEEccCcHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC
Confidence 88999999999999999999999999999999 99999999999999999999999999998666678899999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++. ..++... .+++|+++||||.||++|
T Consensus 164 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 164 ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecccccCCcc
Confidence 8899999999999999999999999999999999999999999999888643 3333333 458999999999999999
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+||+++++ ++++.+..... ...++|.+.|.++.+++++
T Consensus 241 lRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 241 WRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred cEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 9999999864 47777776643 4567899999999888863
No 23
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-41 Score=312.04 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=217.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSAD-DIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~-~v~~t~g~~ 120 (311)
.+.++|+|+.|+|. +++++.+.+++.+.+.......|++ .|..+||+++++++++.+|+. ++++ +|++|+|++
T Consensus 42 ~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~ 116 (410)
T PRK06290 42 PDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116 (410)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence 56789999999965 5567888998887765444456875 899999999999999888987 8886 799999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
+++..++.+++++| |.|+++.|+|+.|...++..|.+++.++++.+.++.+|++.+++.++++++++++++|+||||.+
T Consensus 117 ~al~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v 195 (410)
T PRK06290 117 PALAMLPSCFINPG-DVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV 195 (410)
T ss_pred HHHHHHHHHhCCCC-CEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence 99999999999999 99999999999999999999999999998766678889999999888889999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
++.+++++|+++|++||++||+||+|..+.|++. +.++..+.. .+++|+++||||.|++||+|+||++++.
T Consensus 196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~------- 267 (410)
T PRK06290 196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE------- 267 (410)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence 9999999999999999999999999999888653 234333332 3468999999999999999999999753
Q ss_pred hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++.++|.++.++|++
T Consensus 268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 298 (410)
T PRK06290 268 -LIVKAFATVKDNNDSGQFIAIQKAGIYALDH 298 (410)
T ss_pred -HHHHHHHHHHhccccCCcHHHHHHHHHHhhC
Confidence 37777776644 3456677899999999875
No 24
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.8e-41 Score=312.10 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=216.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSAD-DIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~-~v~~t~g~~ 120 (311)
.++++|+|+.|+|. +++++.+.+++.+.+. ...+|++..|.++||+++++++++++|+. ++++ +|++|+|++
T Consensus 27 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~ 100 (396)
T PRK09147 27 ADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR 100 (396)
T ss_pred cCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence 57899999999965 5667889999888764 34589999999999999999999988988 8885 899999999
Q ss_pred HHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC
Q 021547 121 EAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197 (311)
Q Consensus 121 ~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 197 (311)
+++..++.+++++ | |.|+++.|+|..|...++..|.+++.+|+..+++|.+|++.+++.+.++++++++++|||||
T Consensus 101 ~al~~~~~~l~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPT 179 (396)
T PRK09147 101 EALFAFAQTVIDRDGPG-PLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPT 179 (396)
T ss_pred HHHHHHHHHHcCCCCCC-CEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCc
Confidence 9999999999999 8 99999999999999999999999999998766678999999988777789999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCc-ccc---cC--CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIP-MGV---FG--SIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~-~~~---~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
|.+++.+++++|+++|++||++||+||+|..+.|++. ++.+ +.. ++ ..+++|+++||||.|++||+|+||+++
T Consensus 180 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~ 259 (396)
T PRK09147 180 GAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAG 259 (396)
T ss_pred CccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecC
Confidence 9999999999999999999999999999999988653 2211 111 11 236899999999999999999999997
Q ss_pred eCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++++..... ...++++++|.++.+.+.
T Consensus 260 ~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 260 DA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred CH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 53 47777776654 346788899999776664
No 25
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-41 Score=308.74 Aligned_cols=252 Identities=23% Similarity=0.407 Sum_probs=217.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+++++|+.|+|. +++++.+.+++...... ....|+++.|.+++|+++++++.+++|+.+++++|++|+|+++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al 102 (384)
T PRK06348 28 FPDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGM 102 (384)
T ss_pred cCCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHH
Confidence 3578999999975 45567777766555443 345899999999999999999998899999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+++++| |+|+++.|+|..|...++..|.+++.++..+.+++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 103 ~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 181 (384)
T PRK06348 103 YLALQSILDPG-DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK 181 (384)
T ss_pred HHHHHHhcCCC-CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCH
Confidence 99999999999 99999999999999999999999999987655678899999999988899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
+++++|+++|+++|++||+||+|+++.|++ .+.++..++. .+++|+++||||.|++||+|+||+++++ ++
T Consensus 182 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~ 252 (384)
T PRK06348 182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YI 252 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HH
Confidence 999999999999999999999999998865 3334444442 4589999999999999999999999863 47
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... ...++++++|.+++.+|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 281 (384)
T PRK06348 253 IETAKIINEGICFSAPTISQRAAIYALKH 281 (384)
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhC
Confidence 777777654 3467899999999988864
No 26
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-41 Score=318.49 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=217.8
Q ss_pred CCCCeeecCCCCCCCCCC------------CCC-------------cHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHH
Q 021547 43 DPRPVIPLGHGDPAAFPC------------FRT-------------AAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRA 95 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~------------~~~-------------~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ 95 (311)
.+.++|+|++|+|+-... +.. |..+.+++.+.+... ....|+++.|.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 568999999999841000 222 456777777666532 34579999999999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL 174 (311)
Q Consensus 96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 174 (311)
+++++++++|+.+++++|++|+|+++++..++.+++ ++| |.|+++.|+|+.|...++..|.+++.+++..+++|.+|+
T Consensus 124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~g-D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~ 202 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPS-DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQ 202 (481)
T ss_pred HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCC-CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCH
Confidence 999999989999999999999999999999999998 799 999999999999999999999999999987777889999
Q ss_pred HHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccc----ccC
Q 021547 175 EAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMG----VFG 243 (311)
Q Consensus 175 ~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~----~~~ 243 (311)
+.|++.+++ +++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++ .++.++. .++
T Consensus 203 ~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~ 282 (481)
T PTZ00377 203 EELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELP 282 (481)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhc
Confidence 999998764 78999999999999999999999999999999999999999999999853 3444432 222
Q ss_pred CC----CCeEEEecCccc-CCCCcceeeEEEeeC-CCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 244 SI----VPVITLGSISKR-WIVPGWRFGWLATND-PNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 244 ~~----~~~i~i~s~sK~-~~~~G~r~G~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
.. .++|+++||||. +++||+|+||+++.+ + +++++++........++++++|.+++.+|++
T Consensus 283 ~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p------~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 283 AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP------PEVREQIYKLASINLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC------HHHHHHHHHHhheecCCChHHHHHHHHHhCC
Confidence 22 368999999997 588999999998732 2 2478888777654557899999999999853
No 27
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=9.9e-41 Score=309.05 Aligned_cols=255 Identities=24% Similarity=0.359 Sum_probs=215.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++|+|+.|+|. +++++.+.+++.+.+......+|+++.|.+++|+++++++++++|+.++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~ 103 (405)
T PRK09148 28 AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE 103 (405)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 46789999999865 566788888888877555556899999999999999999998889888887 8999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..+.++..+++.+.+...++++++++++|+||||.++
T Consensus 104 al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~ 182 (405)
T PRK09148 104 GFANMAQAITAPG-DVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVA 182 (405)
T ss_pred HHHHHHHHhcCCC-CEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCC
Confidence 9999999999999 999999999999999999999999999986555544455554444456889999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|++||++||+||+|..+.|++.++.++..++. .+++|+++||||.|++||+|+||++++.
T Consensus 183 s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~-------- 254 (405)
T PRK09148 183 DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE-------- 254 (405)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--------
Confidence 9999999999999999999999999999887654445544433 3468899999999999999999999743
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...++++++|.+++.+|++
T Consensus 255 ~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~ 285 (405)
T PRK09148 255 RLIAALTRVKSYLDYGAFTPIQVAATAALNG 285 (405)
T ss_pred HHHHHHHHHHHHhccCCChHHHHHHHHHHhC
Confidence 47888877754 3467789999999999975
No 28
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=308.63 Aligned_cols=254 Identities=20% Similarity=0.310 Sum_probs=213.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++++|+.|+|. .+.++.+.+++.+.........|++..|..++|+++++|+++.+|+.++++ +|++|+|+++
T Consensus 31 ~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~ 106 (403)
T PRK08636 31 AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE 106 (403)
T ss_pred cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH
Confidence 36789999999876 334666777777665544456899999999999999999999889988887 7999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH----HhhcC---CCccEEEEeCCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV----EALAD---ENTAAIVIINPC 194 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l----~~~l~---~~~~~i~i~~p~ 194 (311)
++.+++.+++++| |.|++++|+|+.+...++..|.+++.+++..++++++|++.+ +++++ .+++++++++||
T Consensus 107 al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~ 185 (403)
T PRK08636 107 GYVHLVQAITNPG-DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPH 185 (403)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCC
Confidence 9999999999999 999999999999999999999999999875455678887754 55553 478899999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
||||.++|.+++++|+++|++|+++||+||+|+.+.|++.++.++..++.. +++|+++||||.|++||+|+||++++.
T Consensus 186 NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~- 264 (403)
T PRK08636 186 NPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK- 264 (403)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH-
Confidence 999999999999999999999999999999999998876555566665442 467889999999999999999998753
Q ss_pred CCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 274 NGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++++.+..... ...++++++|.++..+++
T Consensus 265 -------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~ 294 (403)
T PRK08636 265 -------KLVGALKKIKSWLDYGMFTPIQVAATIALD 294 (403)
T ss_pred -------HHHHHHHHHHHHhcccCChHHHHHHHHHHh
Confidence 47777776654 245677888998887764
No 29
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.6e-40 Score=306.45 Aligned_cols=262 Identities=25% Similarity=0.444 Sum_probs=220.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++++++|+.|+|..+ .+++++.+.+++.+.+. ....|+++.|.++||+++++++......++++++|++|+|++++
T Consensus 31 ~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~ 107 (404)
T PRK09265 31 EGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLP--TAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSEL 107 (404)
T ss_pred cCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhh--cCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHH
Confidence 5789999999998754 36678888888887654 23589999999999999999998655557889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|..+...++..|.+++.++.+.++++.+|.+++++.++++++++++++|+||||.+++
T Consensus 108 l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 108 IVMAMQALLNNG-DEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred HHHHHHHhCCCC-CEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCC
Confidence 999999999999 9999999999999999999999999888755556789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|++||+||+|.++.|++.++.++..++.+.++|+++||||.|++||+|+||++++.+.... +++
T Consensus 187 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~ 264 (404)
T PRK09265 187 KELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGY 264 (404)
T ss_pred HHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHH
Confidence 999999999999999999999999999887655556655555557999999999999999999999985433111 124
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.......++|.++|.++.++|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 292 (404)
T PRK09265 265 IEGLDMLASMRLCANVPAQHAIQTALGG 292 (404)
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHhcC
Confidence 5555443333467899999999998854
No 30
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.4e-40 Score=303.64 Aligned_cols=252 Identities=21% Similarity=0.378 Sum_probs=219.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a 122 (311)
.+++|+|+.|.|. +++++.+.+++.+.+... ..+|.+..|.+++|+++++++++.+|..+++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 4679999999975 567889999998877643 3579999999999999999999988887765 689999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++.+| |+|+++.|+|..|...++..|.+++.++++. +++.+|++.+++.++++++++++++|+||||.+++
T Consensus 103 l~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s 180 (384)
T PRK12414 103 LYAAISALVHPG-DEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFS 180 (384)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCC
Confidence 999999999999 9999999999999999999999999998743 45789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|++||++||+||+|..+.|++.+..++..++. .+++|+++||||.|++||+|+||+++++ +
T Consensus 181 ~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~ 252 (384)
T PRK12414 181 AADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------E 252 (384)
T ss_pred HHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------H
Confidence 999999999999999999999999999887654445544433 4589999999999999999999999864 3
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.+..... ...++|.++|.+++++|++
T Consensus 253 l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~ 282 (384)
T PRK12414 253 LMDEIRKVHQFMVFSADTPMQHAFAEALAE 282 (384)
T ss_pred HHHHHHHHHhheecCCCcHHHHHHHHHhcC
Confidence 7777777653 3567899999999999875
No 31
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-40 Score=304.58 Aligned_cols=254 Identities=24% Similarity=0.403 Sum_probs=222.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++++|+.|.|. +++++.+.+++.+.+.... .+|.+..|.+++|+++++++++.+|..+.+++|++|+|+++|
T Consensus 31 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 105 (402)
T PRK06107 31 AGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA 105 (402)
T ss_pred ccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 36789999999965 5567889999998886543 479999999999999999999888988899999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |.|+++.|+|..|...+...+..++.+++..++++.++++.+++.++++++++++++|+||||.+++
T Consensus 106 l~~~~~~~~~~g-d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s 184 (402)
T PRK06107 106 IFLALMATLEAG-DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYS 184 (402)
T ss_pred HHHHHHHhcCCC-CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcC
Confidence 999999999999 9999999999999998899998888888754567889999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 203 YQHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 203 ~~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
.+++++|+++|+++ ++++|+||+|+.+.|++.++.++..+.. .+++|+++||||.|++||+|+||++++.
T Consensus 185 ~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~------- 257 (402)
T PRK06107 185 RAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA------- 257 (402)
T ss_pred HHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-------
Confidence 99999999999998 9999999999999887655555555533 3589999999999999999999999753
Q ss_pred hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++.++|++++++|++
T Consensus 258 -~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 288 (402)
T PRK06107 258 -DLIAAINKLQSQSSSCPSSISQAAAAAALNG 288 (402)
T ss_pred -HHHHHHHHHHHhcccCCChHHHHHHHHHhcC
Confidence 47888887754 4578999999999999864
No 32
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-40 Score=303.69 Aligned_cols=277 Identities=23% Similarity=0.399 Sum_probs=232.1
Q ss_pred cccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 021547 10 GFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL 89 (311)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~ 89 (311)
+..++++... .....++++.+.. + ..+++|+|+.|+|. +++++.+.+++.+.+... ..+|.+..|.
T Consensus 7 ~~~~~~~~~~---~~~~~~~~~~~~~-~-----~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~ 72 (391)
T PRK08361 7 KYFIAGRINL---IQRSKIRELFERA-S-----KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGI 72 (391)
T ss_pred ccchhHHHHh---CCccHHHHHHHHH-H-----hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCc
Confidence 3444655555 5555666666532 1 13578999999975 556788999998887653 3479888999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC
Q 021547 90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG 169 (311)
Q Consensus 90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (311)
++||+++++++++.+|.++++++|++|+|+++++.+++.+++++| |+|++++|+|..+...++..|.+++.++++.+.+
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 151 (391)
T PRK08361 73 PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEG-DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENE 151 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccC
Confidence 999999999999888888999999999999999999999999999 9999999999999999999999999999876667
Q ss_pred cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
+.+|++++++.++++++++++++|+||||.+++.+++++|+++|++++++||+||+|+.+.+++....++..++ .+++|
T Consensus 152 ~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i 230 (391)
T PRK08361 152 FQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTI 230 (391)
T ss_pred CCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEE
Confidence 88999999999988999999999999999999999999999999999999999999999888654444544443 34789
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++|+||.|+++|+|+||++++. ++++.+..... ...+++.+.|.++..+|++
T Consensus 231 ~~~s~SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK08361 231 LANSFSKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRS 284 (391)
T ss_pred EEecCchhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcC
Confidence 99999999999999999999853 36777666543 3467888999999998865
No 33
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=8.4e-40 Score=301.55 Aligned_cols=268 Identities=24% Similarity=0.415 Sum_probs=225.4
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 103 (311)
....++++..... .+. ..++++++|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|+++++++++.
T Consensus 11 ~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~ 83 (388)
T PRK07337 11 EPFYVMELAKEAQ-ALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARR 83 (388)
T ss_pred CchHHHHHHHHHH-HHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3444555444332 222 246889999999965 556788899998887643 457998889999999999999998
Q ss_pred CCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+|+.+++++|++|+|+++++..++.+++++| |+|+++.|+|..+...++..|.+++.++++.++++.+|++++++.+++
T Consensus 84 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (388)
T PRK07337 84 FGLDVAPERIVVTAGASAALLLACLALVERG-DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE 162 (388)
T ss_pred hCCCCChHhEEEecCcHHHHHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc
Confidence 8998999999999999999999999999999 999999999999999999999999999986666789999999999988
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+++.. .+...+ .+++|+++|+||.|++||+
T Consensus 163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~~~G~ 239 (388)
T PRK07337 163 RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFNMTGW 239 (388)
T ss_pred cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcCCchh
Confidence 9999999999999999999999999999999999999999999998876542 222222 3578999999999999999
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||+++++ ++++++..... ...++++++|.++..++++
T Consensus 240 RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 279 (388)
T PRK07337 240 RLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEP 279 (388)
T ss_pred heeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhcc
Confidence 999999863 37777776643 3457899999999888863
No 34
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.5e-39 Score=299.56 Aligned_cols=272 Identities=24% Similarity=0.411 Sum_probs=228.0
Q ss_pred hHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 021547 14 KQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR 93 (311)
Q Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr 93 (311)
+.+.+. .....+++.+..+ + ..+++|+|+.|.|. +++++.+.+++.+.+... ...|++..|..++|
T Consensus 6 ~~~~~~---~~~~~~~~~~~~~-~-----~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr 71 (387)
T PRK07683 6 NPRVKD---IQISGIRQFSNMV-Q-----NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELR 71 (387)
T ss_pred hHHHHh---CCccHHHHHHHHH-H-----hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence 444444 5666677766532 1 13678999999965 566788999999888653 35899889999999
Q ss_pred HHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCccc
Q 021547 94 RAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV 172 (311)
Q Consensus 94 ~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 172 (311)
+++++++++++|+.++++ +|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|++++.++.+ .+++.+
T Consensus 72 ~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~ 149 (387)
T PRK07683 72 KAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPG-TEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRL 149 (387)
T ss_pred HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCC-CEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCC
Confidence 999999998889888888 99999999999999999999999 999999999999999999999999999874 356778
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEE
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITL 251 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i 251 (311)
|.+++++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++. ..++..+ +..+++|++
T Consensus 150 ~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~ 228 (387)
T PRK07683 150 TAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVI 228 (387)
T ss_pred CHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEE
Confidence 89999999888899999999999999999999999999999999999999999999887653 3344444 334579999
Q ss_pred ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHHHhhhhc
Q 021547 252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 310 (311)
+||||.|++||+|+||++++. ++++++...... ..+++.++|.++.++|++
T Consensus 229 ~s~SK~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 280 (387)
T PRK07683 229 NGLSKSHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTA 280 (387)
T ss_pred eeccccccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhC
Confidence 999999999999999999853 367777665432 356788999999999864
No 35
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=300.70 Aligned_cols=273 Identities=23% Similarity=0.263 Sum_probs=228.6
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
..+..++.+.+.+.+.. ..+.+.++|+.|+|. +++++.+.+++.+.+.......|.+..|.++||+++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 9 LFPPPIPEVRAWLAGYD--GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred cCChHHHHHHHHHHHHh--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 34456666666533222 246779999999975 456788999998887655556798889999999999999999
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+|..+++++|++|+|+++++..++.+++++| |+|+++.|+|..+...++..|.+++.++++.+.++.+|.+++++.++
T Consensus 83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAG-DEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred HhCCCCCcceEEEecCcHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence 88988999999999999999999999999999 99999999999999999999999999998655677889999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~ 261 (311)
++++++++++|+||||.+++.+++++|+++|+++|++||+|++|+.+.+++....++... +...++|+++||||.|+++
T Consensus 162 ~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 241 (386)
T PRK07550 162 PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALT 241 (386)
T ss_pred ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCc
Confidence 899999999999999999999999999999999999999999999887654322222222 2345799999999999999
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+|+||++++. ++++.+..... ...++|.++|.+++++|++
T Consensus 242 G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 283 (386)
T PRK07550 242 GHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN 283 (386)
T ss_pred ccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc
Confidence 99999999853 36777776644 4567899999999998864
No 36
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.3e-39 Score=301.28 Aligned_cols=262 Identities=29% Similarity=0.510 Sum_probs=218.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++|+|+.|.|... .+++++.+.+++.+.+... ...|+++.|..+||++++++++..+|+++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 105 (398)
T PRK08363 28 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105 (398)
T ss_pred cCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 4689999999998521 3677899999999887654 3479888999999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |.|+++.|+|..+...++..|.+++.++...++++.+|.+.+++.++++++++++++|+||||.+++
T Consensus 106 l~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 106 LQLIFGALLDPG-DEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence 999999999999 9999999999999999999999988884334456789999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|++||+|++|..+.|++. +.++..++...++|+++||||.|++||+|+||+++.++.... +.+
T Consensus 185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~--~~l 261 (398)
T PRK08363 185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKL--AEV 261 (398)
T ss_pred HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHH--HHH
Confidence 99999999999999999999999999888653 334445555668999999999999999999999983322111 112
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
...+........++|.++|.+++++|++
T Consensus 262 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 289 (398)
T PRK08363 262 REAIDKLARIRLCPNTPAQFAAIAGLTG 289 (398)
T ss_pred HHHHHHHhcccccCChHHHHHHHHHHhC
Confidence 2333322223457899999999988864
No 37
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=9.3e-40 Score=301.69 Aligned_cols=253 Identities=24% Similarity=0.386 Sum_probs=215.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCC-CEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK--LSAD-DIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~--~~~~-~v~~t~g~ 119 (311)
.+.++++|+.|+|. +++++.+.+++.+.+. ....|+++.|.+++|+++++++++.+|++ ++++ +|++|+|+
T Consensus 26 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 26 ASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred cCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 46899999999965 5678899999988764 34589999999999999999999988875 6775 79999999
Q ss_pred HHHHHHHHHHHhcCCCCE--EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC
Q 021547 120 MEAVEIILTVITRLGAAN--ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 197 (311)
++++..++.+++++| |. |+++.|+|..|...++..|.+++.+++..++++.+|.+++++.+.++++++++++|+|||
T Consensus 100 ~~al~~~~~~l~~~g-d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPt 178 (393)
T TIGR03538 100 REALFAFAQAVINPG-QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPT 178 (393)
T ss_pred HHHHHHHHHHHcCCC-CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCc
Confidence 999999999999999 86 999999999999999999999999998666678899999998887789999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCc-ccc---c--CCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIP-MGV---F--GSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~-~~~---~--~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
|.+++.+++++|+++|++||++||+||+|..+.+++. ++.+ +.. . +..+++|+++||||.|++||+|+||+++
T Consensus 179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~ 258 (393)
T TIGR03538 179 GAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG 258 (393)
T ss_pred CcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec
Confidence 9999999999999999999999999999999887642 2222 111 1 1245899999999999999999999987
Q ss_pred eCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 271 NDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+. ++++++..... ...+++++.|.++.+.+.+
T Consensus 259 ~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 259 DA--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred CH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 53 47777776654 3457788999998777643
No 38
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=298.11 Aligned_cols=251 Identities=25% Similarity=0.396 Sum_probs=215.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a 122 (311)
..++|+|+.|.|. .+.++.+.+++.+.+... ..+|++..|.+++|+++++++++.+|+.++++ +|++|+|++++
T Consensus 25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 99 (387)
T PRK08912 25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA 99 (387)
T ss_pred hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence 3578999999976 345677888887776543 45799999999999999999998889888998 99999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |+|+++.|+|..|...++..|.+++.+++.+ +++.+|++.+++.++++++++++++|+||||.+++
T Consensus 100 l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s 177 (387)
T PRK08912 100 LAAALLALVEPG-DEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFP 177 (387)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccC
Confidence 999999999999 9999999999999999999999999998743 45789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|+++|++||+||+|+.+.|++.++.++..+.. .+++|+++|+||.|+++|+|+||++++. +
T Consensus 178 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~ 249 (387)
T PRK08912 178 REELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------P 249 (387)
T ss_pred HHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------H
Confidence 999999999999999999999999998887654445444433 4589999999999999999999999853 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+++.+..... ..+++++..|.+++..|.
T Consensus 250 ~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 278 (387)
T PRK08912 250 LLRVLAKAHQFLTFTTPPNLQAAVAYGLG 278 (387)
T ss_pred HHHHHHHHHhhccccCChHHHHHHHHHHh
Confidence 7777776644 335677778888887764
No 39
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1e-39 Score=300.01 Aligned_cols=251 Identities=24% Similarity=0.406 Sum_probs=217.3
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~ 123 (311)
+++|+|+.|+|. +++++.+.+++.+.+.. ...+|.+..|.+++|+++++++++.+|+.++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 578999999975 45567788888887764 345799889999999999999999889888876 799999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
.+++.+++++| |+|++++|+|+.|...++..|.+++.++...++++.+|++.+++.+.++++++++++|+||||.+++.
T Consensus 95 ~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~ 173 (378)
T PRK07682 95 DVAMRAIINPG-DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNK 173 (378)
T ss_pred HHHHHHhCCCC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCH
Confidence 99999999999 99999999999999999999999999987655678899999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
+++++|+++|++|++++|+||+|..+.|++. +.++..+.. .+++|+++||||.|++||+|+||++++. ++
T Consensus 174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~ 244 (378)
T PRK07682 174 SELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YF 244 (378)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HH
Confidence 9999999999999999999999999988753 333333332 3589999999999999999999999853 47
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++.+..... ...+++.++|.+++++|++
T Consensus 245 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 273 (378)
T PRK07682 245 SEAMLKIHQYSMMCAPTMAQFAALEALRA 273 (378)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHhC
Confidence 787776643 3467889999999999865
No 40
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-39 Score=297.85 Aligned_cols=278 Identities=28% Similarity=0.391 Sum_probs=226.9
Q ss_pred chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547 13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA 92 (311)
Q Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l 92 (311)
++++... .....++++.....+. . ..+.++++|+.|.|. ++.++.+.+++.+... ....|.+..|.+++
T Consensus 3 ~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~l 71 (397)
T PRK07568 3 ISKRVLN---MPASPIRKLVPYADEA-K-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPEL 71 (397)
T ss_pred hhhHhhh---CCcchHHHHHHHHHHH-H-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHH
Confidence 3444444 3455666666543221 1 124679999999965 5567889999887653 34579999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCccc
Q 021547 93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV 172 (311)
Q Consensus 93 r~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 172 (311)
|+++++++. .+|+++++++|++|+|+++++..++.+++++| |+|++++|+|..+...++..|.+++.++.+.+.++..
T Consensus 72 r~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~ 149 (397)
T PRK07568 72 REAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPG-DEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHL 149 (397)
T ss_pred HHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCC-CEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCC
Confidence 999999998 47888899999999999999999999999999 9999999999999999999999999998754445443
Q ss_pred -CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEE
Q 021547 173 -DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVIT 250 (311)
Q Consensus 173 -d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~ 250 (311)
+++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+|++|..+.|++.++.++..++. .+++|+
T Consensus 150 ~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 229 (397)
T PRK07568 150 PSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVII 229 (397)
T ss_pred CCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEE
Confidence 679999999889999999999999999999999999999999999999999999999887655555555544 568999
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++|+||.|++||+|+||++++++ ++++.+........++|.++|.+++.+|++
T Consensus 230 ~~S~SK~~~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 282 (397)
T PRK07568 230 IDSVSKRYSACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDT 282 (397)
T ss_pred EecchhhccCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhC
Confidence 99999999999999999998643 366666555433467899999999999864
No 41
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.5e-39 Score=306.77 Aligned_cols=254 Identities=20% Similarity=0.328 Sum_probs=210.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--S-MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++|+|+.+.+. +|. .+++...+.+.. + ....|+++.|.+++|++|++|+.+++|+++++++|++|+|++
T Consensus 128 ~p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~ 201 (534)
T PLN02231 128 HPSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS 201 (534)
T ss_pred CCccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence 4688888865532 332 444444455543 2 356799999999999999999999889999999999999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCC
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p 193 (311)
+++..++.+++. +| |.|+++.|+|+.|...++..|.+++.++++.+++|.+|+++|++.+++ +++++++++|
T Consensus 202 ~ai~~~~~~l~~~~g-d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP 280 (534)
T PLN02231 202 PAVHMMMQLLIRSEK-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINP 280 (534)
T ss_pred HHHHHHHHHhccCCC-CEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCC
Confidence 999999999985 79 999999999999999999999999999987667799999999998754 6889999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccC-------CCCCeEEEecCcccC-CCCcce
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFG-------SIVPVITLGSISKRW-IVPGWR 264 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~-------~~~~~i~i~s~sK~~-~~~G~r 264 (311)
+||||.+++.+++++|+++|+++|++||+||+|..+.|+ +.++.++..+. .+.++|+++|+||.| +++|+|
T Consensus 281 ~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlR 360 (534)
T PLN02231 281 GNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKR 360 (534)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccc
Confidence 999999999999999999999999999999999999995 44555554432 123699999999975 789999
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+||+++++.. +++++.+........+++.+.|.++..+++
T Consensus 361 iGy~~~~~~~-----~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~ 400 (534)
T PLN02231 361 GGYMEVTGFT-----SDVREQIYKVASVNLCSNISGQILASLVMS 400 (534)
T ss_pred eEEEEEecCC-----HHHHHHHHHHHhhhcCCChHHHHHHHHHhC
Confidence 9999875311 247777766655556778889998888875
No 42
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=295.63 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=207.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++.++++|+.|+|. +++++.+.+++.+... ....|+++.|..+||+++++++++++|+++++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a 95 (374)
T PRK05839 22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV 95 (374)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 36799999999965 5667888888887653 35589999999999999999999988988999999999999999
Q ss_pred HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
+..++.+++ ++| |.|+++.|+|+.|...++..|++++.++.+.++++.+|.++.+ + ++++++++++||||||.+
T Consensus 96 l~~~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~ 171 (374)
T PRK05839 96 LFNFPQFVLFDKQN-PTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRT 171 (374)
T ss_pred HHHHHHHHhcCCCC-CEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcc
Confidence 999988875 478 9999999999999999999999999999866666777765432 2 468999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc------CCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF------GSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~------~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
++.+++++|+++|+++|++||+||+|..+.+++ ++.++... ...+++|+++||||.|++||+|+||++++.
T Consensus 172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~-- 248 (374)
T PRK05839 172 LSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA-- 248 (374)
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH--
Confidence 999999999999999999999999999976543 33332211 123589999999999999999999999842
Q ss_pred CccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 275 GVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++++.... ...+++.++|.++..++.+
T Consensus 249 ------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (374)
T PRK05839 249 ------SILKKYKAYRTYLGCASPLPLQKAAAVAWLD 279 (374)
T ss_pred ------HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence 47788777643 3467888899998876643
No 43
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-39 Score=295.75 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=218.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+++|+|+.|+|. +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al 97 (382)
T PRK06108 23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL 97 (382)
T ss_pred cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence 3578999999965 6778999999998876543 4699999999999999999998889888999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |+|+++.|+|..+...++..|.+++.+++..+ .+|.+|++.+++.++++++++++++|+||||.+++
T Consensus 98 ~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~ 176 (382)
T PRK06108 98 MLAAQALVGPG-DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTAS 176 (382)
T ss_pred HHHHHHhcCCC-CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccC
Confidence 99999999999 99999999999999999999999999998653 45779999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
.+++++|+++|+++|+++|+||+|+.+.++ +....++..+. ..+++|+++||||.|+++|+|+||++++.
T Consensus 177 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-------- 248 (382)
T PRK06108 177 RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-------- 248 (382)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------
Confidence 999999999999999999999999999886 33333333332 34589999999999999999999999853
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++++.|.++..+|++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 279 (382)
T PRK06108 249 ALGQVLEKLIEYNTSCVAQFVQRAAVAALDE 279 (382)
T ss_pred HHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 47777766543 3467899999999988865
No 44
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-39 Score=295.25 Aligned_cols=252 Identities=24% Similarity=0.297 Sum_probs=218.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~~a 122 (311)
.+++++|+.|.|. +++++.+.+++.+.+.......|.+..|.+++|+++++++.+.+|..++ +++|++|+|++++
T Consensus 26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~ 101 (389)
T PRK05957 26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA 101 (389)
T ss_pred CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence 3578999999965 5678899999998876555557999999999999999999988888777 7789999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|++++|+|..+...++..|++++.++.+ .++.+|++++++.++++++++++++|+||||.+++
T Consensus 102 l~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~ 178 (389)
T PRK05957 102 FMNAILAITDPG-DEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYP 178 (389)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcC
Confidence 999999999999 999999999999988889999999999863 46789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|+++|++||+||+|+.+.|++.+..++..+ +...++|+++||||.|++||+|+||+++++ +
T Consensus 179 ~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~ 250 (389)
T PRK05957 179 EALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------H 250 (389)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------H
Confidence 9999999999999999999999999998875443333333 445589999999999999999999999853 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++..... ...+++.++|.++..+|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 280 (389)
T PRK05957 251 LLEAIKKIQDTILICPPVVSQYAALGALQV 280 (389)
T ss_pred HHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence 7888887754 3467788999999988865
No 45
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.5e-39 Score=299.24 Aligned_cols=248 Identities=22% Similarity=0.248 Sum_probs=203.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.++++++|+.|+|. +++++.+.+++.+.+.. ....+|.++.|.++||+++++++.+.+|+++++++|++|+|
T Consensus 32 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G 107 (409)
T PRK07590 32 PEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDG 107 (409)
T ss_pred CCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC
Confidence 46789999999965 56778888988887764 24458999899999999999999888899999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE-----------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE-----------VRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+++++.+++ .++.+| |+|++++|+|+.|...++..|.+ ++.++++.++++.++.+ .+++++
T Consensus 108 a~~al~~l~-~~~~~g-d~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~ 179 (409)
T PRK07590 108 AKCDTGNIL-DIFGPD-NTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDI 179 (409)
T ss_pred HHHHHHHHH-HhcCCC-CEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceE
Confidence 999999865 456899 99999999999999999999987 88888754445555432 257899
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G 266 (311)
+++++|+||||.+++.+++++|+++|++||++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+|
T Consensus 180 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG 259 (409)
T PRK07590 180 IYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCA 259 (409)
T ss_pred EEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeE
Confidence 999999999999999999999999999999999999999998886644445555543 3479999999999999999999
Q ss_pred EEEeeCCCCccchhhHHHH------------Hhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 267 WLATNDPNGVLQKSGIVGS------------IKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+++++ +++++ +..... ...++|.++|.+++.++++
T Consensus 260 ~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 260 YTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred EEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 999864 24441 122222 2236789999999888763
No 46
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.7e-40 Score=303.89 Aligned_cols=263 Identities=20% Similarity=0.224 Sum_probs=206.7
Q ss_pred CCCeeecCCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChH
Q 021547 44 PRPVIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~-~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~ 120 (311)
.+++|+|+.|.|.. ...++..+.+.+++.+.+..+...+|++..|.++||+++++|+.+..+..+++++| ++|+|++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~ 104 (396)
T PRK09257 25 RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT 104 (396)
T ss_pred CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence 46889999996421 01123347888998887765555589999999999999999998766655678887 9999999
Q ss_pred HHHHHHHHHH--hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCC
Q 021547 121 EAVEIILTVI--TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCN 195 (311)
Q Consensus 121 ~a~~~~~~~l--~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~n 195 (311)
+++.+++.++ +++| |+|++++|+|+.|...++..|++++.+++...+++++|++.+++.++ .++.++++++|||
T Consensus 105 ~al~~~~~~l~~~~pG-d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~N 183 (396)
T PRK09257 105 GALRVGADFLKRAFPD-AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHN 183 (396)
T ss_pred HHHHHHHHHHHHhCCC-CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 9999998776 4799 99999999999999999999999999987444567899999998765 2345666789999
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe--e
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT--N 271 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~--~ 271 (311)
|||.+++.+++++|+++|++||++||+||+|..+.++ +..+.++..+.. .+++|+++||||.|+++|+|+||+++ +
T Consensus 184 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~ 263 (396)
T PRK09257 184 PTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAE 263 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeC
Confidence 9999999999999999999999999999999998875 222334433332 35799999999999999999999985 2
Q ss_pred CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 272 DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++ .. .+++.+++... ....+++.++|.+++++|++
T Consensus 264 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 300 (396)
T PRK09257 264 DAE-EA--DRVLSQLKATIRTNYSNPPAHGAAIVATILND 300 (396)
T ss_pred CHH-HH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCC
Confidence 221 00 02445554443 33456789999999998864
No 47
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=8.3e-39 Score=295.05 Aligned_cols=250 Identities=25% Similarity=0.443 Sum_probs=214.9
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~ 123 (311)
+++|+|+.|.|. +++++.+.+++.+.+... ...|.+..|.+++|++++++++..+|+.+.+ ++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 679999999975 455788889988877643 3479988999999999999999888887764 7999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNV 200 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~ 200 (311)
.+++.+++++| |+|++++|+|..+...++..|.+++.++.+ ..++.+|.+.+++.++. +++++++++|+||||.+
T Consensus 105 ~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 105 SASLTAILEPG-DKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT 182 (391)
T ss_pred HHHHHHhcCCC-CEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence 99999999999 999999999999999999999999999864 34578999999988753 68899999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
++.+++++|+++|++||+++|+|++|..+.|++.++.++..+. .+++|+++|+||.|++||+|+||++++.
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~~v~~~-------- 253 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGLIFAPA-------- 253 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEEEEeCH--------
Confidence 9999999999999999999999999999998665544544443 3589999999999999999999999853
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...++++++|.++.++|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK07309 254 EFTAQLIKSHQYLVTAATTMAQFAAVEALTN 284 (391)
T ss_pred HHHHHHHHHHhhcccCCChHHHHHHHHHHhC
Confidence 47777776533 3457899999999999875
No 48
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-39 Score=295.21 Aligned_cols=279 Identities=24% Similarity=0.421 Sum_probs=235.3
Q ss_pred cchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 021547 12 EVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91 (311)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~ 91 (311)
++|++.+. ..++.++++..... .+.+ .++++++|+.|+|. +++++.+.+++.+.+.... ..|.+..|..+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~ 72 (393)
T PRK05764 3 KLSKRVSR---VTPSATLAVTAKAK-ELKA-QGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPE 72 (393)
T ss_pred chhhhhhh---cCchHHHHHHHHHH-HHHh-ccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHH
Confidence 35666666 56677766665432 2222 36789999999975 5667899999988876543 36999899999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547 92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE 171 (311)
Q Consensus 92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (311)
||+++++++.+.+|..+.+++|++|+|+++++..++.+++++| |.|+++.|+|..+...++..|.+++.++.+.+.++.
T Consensus 73 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 73 LREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPG-DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCC-CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 9999999999888888889999999999999999999999999 999999999999999999999999999986566788
Q ss_pred cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc--CCCCCeE
Q 021547 172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF--GSIVPVI 249 (311)
Q Consensus 172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~--~~~~~~i 249 (311)
+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++..+.++..+ +..+++|
T Consensus 152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 231 (393)
T PRK05764 152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI 231 (393)
T ss_pred CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence 99999999998889999999999999999999999999999999999999999999988866544444443 2345899
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+++||||.|+++|+|+||++++. +++++++.... ...++++++|+++.++|+
T Consensus 232 ~~~s~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 284 (393)
T PRK05764 232 TVNGFSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALN 284 (393)
T ss_pred EEecCcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence 99999999999999999999642 47788877754 356889999999998886
No 49
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.3e-38 Score=293.52 Aligned_cols=253 Identities=27% Similarity=0.443 Sum_probs=216.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a 122 (311)
..++++|+.|.|+ .+.++.+.+++.+.+... ..+|.+..|.+++|+++++++.+.+|++.+++ +|++|+|++++
T Consensus 23 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 97 (387)
T PRK07777 23 RTGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA 97 (387)
T ss_pred hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 3588999999976 334566788877777643 35799989999999999999998889888776 79999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
+.+++.+++++| |+|+++.|+|..|...++..|.+++.+++.+. .++.+|++.+++.++++++++++++|+||||.++
T Consensus 98 l~~~~~~~~~~g-d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~ 176 (387)
T PRK07777 98 IAAAVLGLVEPG-DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVL 176 (387)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccC
Confidence 999999999999 99999999999999999999999999988665 3678999999999888899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|+++++++|+||+|.++.|++..+.++..++. .+++|+++||||.|++||+|+||++++.
T Consensus 177 ~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-------- 248 (387)
T PRK07777 177 TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-------- 248 (387)
T ss_pred CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------
Confidence 9999999999999999999999999999887655555555443 4579999999999999999999999753
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++++.|.+++.++++
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (387)
T PRK07777 249 PLIAAVRAAKQYLTYVGGAPFQPAVAHALDH 279 (387)
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHhC
Confidence 36777776643 3456788889998888764
No 50
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.2e-39 Score=295.47 Aligned_cols=251 Identities=22% Similarity=0.321 Sum_probs=218.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a 122 (311)
..++|+|+.|.|+ ++.++.+.+++.+.+... ...|.+..|.+++|+++++++.+.+|....++ +|++|+|++++
T Consensus 29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a 103 (386)
T PRK09082 29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA 103 (386)
T ss_pred hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence 3578999999865 556788999998887643 35799989999999999999998888877765 89999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|..+...++..|.+++.++... .++.+|++.+++.++++++++++++|+||||.+++
T Consensus 104 l~~~~~~~~~~g-d~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 104 LFAAILALVRPG-DEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWS 181 (386)
T ss_pred HHHHHHHHcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCC
Confidence 999999999999 9999999999999999999999999999753 46889999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|++||+++|+|++|+.+.|++.+..++..+.. .+++|+++||||.|+++|+|+||++++. +
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~ 253 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------A 253 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------H
Confidence 999999999999999999999999999887655555544443 4689999999999999999999999853 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+++.++.... ...+++.++|.+++++|+
T Consensus 254 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 282 (386)
T PRK09082 254 LSAEFRKVHQYNTFTVNTPAQLALADYLR 282 (386)
T ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHh
Confidence 7788777643 356789999999999986
No 51
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=8.7e-39 Score=290.84 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=211.1
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVE 124 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~ 124 (311)
.+++|+.|+|. +++++.+.+++.+... ....|+++.|..+||+++++++++.+|++++++ +|++|+|+++++.
T Consensus 1 ~~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~ 74 (350)
T TIGR03537 1 RLFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF 74 (350)
T ss_pred CeEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 36899999965 6678899999988754 355899989999999999999999889999998 9999999999999
Q ss_pred HHHHHHhcCCC--CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 125 IILTVITRLGA--ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 125 ~~~~~l~~~g~--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
.++.+++++|. |+|+++.|+|..|...++..|.+++.+++..++++.+|++.++++++++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 75 HFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAP 154 (350)
T ss_pred HHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccC
Confidence 99999998761 5999999999999999999999999999865667889999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|++||+||+|+.+.+++ +..++..++ .+++|+++|+||.||++|+|+||++++. ++
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~ 224 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KL 224 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HH
Confidence 9999999999999999999999999887654 333333333 3589999999999999999999998642 47
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++.++.... ...++++++|.++.+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 252 (350)
T TIGR03537 225 ISFLRKLRANFGVASPDFVQAAAKAAWS 252 (350)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence 777776643 344566678888766654
No 52
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-39 Score=300.77 Aligned_cols=278 Identities=16% Similarity=0.186 Sum_probs=208.0
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 103 (311)
...++.+.+.. ++...+++|+|+.|.|. ..+.....+.+.+++.+....+...+|.++.|.+++|+++++|+.+.
T Consensus 13 ~~~~~~~~~~~----~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~ 88 (404)
T PTZ00376 13 PDPILGLAAAF----KADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGE 88 (404)
T ss_pred CChHHHHHHHH----hhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 34566655543 12234688999999852 21212223444555444333344568999999999999999999776
Q ss_pred CCCCCCCCCEE--EeCChHHHHHHHHH---HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547 104 LPYKLSADDIY--ITLGCMEAVEIILT---VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 104 ~g~~~~~~~v~--~t~g~~~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 178 (311)
.+..+++++|+ .|.|+++++..++. +++++| |+|++++|+|+.|...++..|++++.+++.+++++++|.+.++
T Consensus 89 ~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~ 167 (404)
T PTZ00376 89 ASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAG-TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGML 167 (404)
T ss_pred CccccccCeEEEeeccCcchHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHH
Confidence 66667888998 48999999988775 667899 9999999999999999999999999999855556899999999
Q ss_pred hhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCcccccCC-CCCeEEEe
Q 021547 179 ALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVFGS-IVPVITLG 252 (311)
Q Consensus 179 ~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~~~-~~~~i~i~ 252 (311)
+.++ ++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++. .+.++..+.. .+++|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 247 (404)
T PTZ00376 168 EDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQ 247 (404)
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 9874 3456778899999999999999999999999999999999999999988641 2223333322 34799999
Q ss_pred cCcccCCCCcceeeEEEe--eCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 253 SISKRWIVPGWRFGWLAT--NDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
||||.|+++|+|+||+++ .+++ .. ..+++.++... ....++++++|.+++++|++
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 305 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKE-EA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSD 305 (404)
T ss_pred eCCCcccccccccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCC
Confidence 999999999999999853 2221 00 01344444432 33345688999999998865
No 53
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.9e-39 Score=301.29 Aligned_cols=253 Identities=22% Similarity=0.343 Sum_probs=205.9
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCcHHHHHHHHHHHhhcCCC--CCCC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-----------SMFNCYAPMFGLPLARRAVAEYLNRDLPY--KLSA 110 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~--~~~~ 110 (311)
+.++|+|+.+.+. ++. +.+.+.+...... .....|++..|.++||+++++++++.+|. .+++
T Consensus 37 p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 37 PSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 5689999999743 222 5555555443110 12345998899999999999999987774 4789
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCcccCHHHHHhhcCC------
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------ 183 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 183 (311)
++|++|+|+++++..++.+++++| |.|+++.|+|+.|...+. ..|.+++.+++..++++.++.+.+++.+.+
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~pG-d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~ 190 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEPG-DAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNL 190 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCCC-CEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999 999999999999988777 589999999886667888999999887643
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc---------CCCCCeEEEecC
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---------GSIVPVITLGSI 254 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~---------~~~~~~i~i~s~ 254 (311)
+++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++.++.++... +..+++++++||
T Consensus 191 ~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~ 270 (468)
T PLN02450 191 KVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSL 270 (468)
T ss_pred CeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEec
Confidence 78999999999999999999999999999999999999999999988876544443211 134689999999
Q ss_pred cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
||.|++||+|+||++++++ .+++.+..... ..++|.++|.+++.+|++
T Consensus 271 SK~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~ 318 (468)
T PLN02450 271 SKDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSD 318 (468)
T ss_pred cccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCC
Confidence 9999999999999998643 24555554433 235789999999999976
No 54
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=297.02 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=221.8
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--CC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SM-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+.+++|+.|.|+. .+.+.....+++.+.++. .. ...|.++.|..+||+++++++....|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 8899999998763 355667888888887752 23 558888899999999999999988999999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEe-CCCCCCcc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVII-NPCNPCGN 199 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~-~p~nptG~ 199 (311)
|++++++.++++| |.|++++|+|......++..|++++.+|++ ..++|+|.|++.++. ++|+++++ +.+||||.
T Consensus 167 al~l~~~~l~~pG-d~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~ 242 (459)
T COG1167 167 ALDLLLRLLLDPG-DTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence 9999999999999 999999999999999999999999999885 446999999998876 57776555 44899999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
++|.++.++|+++|++||++||+||.|+.+.|++.+..++..++..++|||++||||+ .+||+|+||++++.
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~------- 314 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP------- 314 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence 9999999999999999999999999999999998888788899988999999999999 69999999999974
Q ss_pred hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
.+++++.+... ....++.++|.+++..|.+
T Consensus 315 -~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~ 345 (459)
T COG1167 315 -ELIEKLLRLKQAADLGPSSLSQAALAAFLLS 345 (459)
T ss_pred -HHHHHHHHHHHHhcCCCChHHHHHHHHHHHc
Confidence 47888777744 5688999999999998874
No 55
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1e-38 Score=297.59 Aligned_cols=287 Identities=20% Similarity=0.310 Sum_probs=224.7
Q ss_pred cccchHHhhHHHHhhhhhHHHHHHHHHh-hhcc-CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh------c----
Q 021547 10 GFEVKQELNREREAEVAAFRYAIVSLME-SVDK-NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR------S---- 77 (311)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~------~---- 77 (311)
+..+|++++.......+.+....+.... .+.. ..+.++|+|+.+.. .-....+.+.+..... .
T Consensus 10 ~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~ 84 (447)
T PLN02607 10 AVGLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPG 84 (447)
T ss_pred hhhhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccc
Confidence 4456766666333344555554433333 2333 35677999999973 3345666666655432 0
Q ss_pred -CCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-
Q 021547 78 -SMFNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK- 153 (311)
Q Consensus 78 -~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~- 153 (311)
.....|.+..|.++||+++|+++++.+| .++++++|++|+|+++++++++.+++++| |.|+++.|+|+.|...+.
T Consensus 85 ~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pG-D~Vlv~~P~Y~~f~~~~~~ 163 (447)
T PLN02607 85 FRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRW 163 (447)
T ss_pred cchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHh
Confidence 1233588888999999999999998776 36889999999999999999999999999 999999999999987766
Q ss_pred HcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 154 RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 154 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
..|.+++.++....++|.++.+.+++++++ +++++++++|+||||.+++.+++++|+++|+++|++||+||+|+
T Consensus 164 ~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa 243 (447)
T PLN02607 164 RTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYS 243 (447)
T ss_pred cCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 589999999886667788999999987753 78999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCccccc----C--C-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchh
Q 021547 228 HLAFGSTPYIPMGVF----G--S-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300 (311)
Q Consensus 228 ~~~~~~~~~~~~~~~----~--~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (311)
.+.|++.++.++..+ + + .+++++++|+||.||++|+|+||+++.++ .++..++.... ...+|.++
T Consensus 244 ~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~ 315 (447)
T PLN02607 244 GSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQT 315 (447)
T ss_pred ccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHH
Confidence 988876555554332 1 1 45899999999999999999999998543 36666665543 23568889
Q ss_pred HHHHHhhhhc
Q 021547 301 QVCEMFLLVN 310 (311)
Q Consensus 301 q~~~~~~l~~ 310 (311)
|.+++.+|++
T Consensus 316 q~~~~~~L~d 325 (447)
T PLN02607 316 QHLLASMLSD 325 (447)
T ss_pred HHHHHHHhCC
Confidence 9999999987
No 56
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.5e-38 Score=291.36 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=211.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++++|+.|+|. ++.++.+ +++.+++..... +|++..|.++||+++++++. .+++++|++|+|++++
T Consensus 24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA 92 (373)
T ss_pred ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence 47899999999975 4555666 777777765544 89999999999999999985 2578899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |+|+++.|+|..+...++..|.+++.+++..++++.+|++.+++.++++++++++++|+||||.+++
T Consensus 93 l~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~ 171 (373)
T PRK07324 93 NFLVLYALVEPG-DHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMD 171 (373)
T ss_pred HHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCC
Confidence 999999999999 9999999999999999999999999999877677889999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|++||++||+||+|..+.+++. +.++... .+++|+++||||.|+++|+|+||++++ + ++
T Consensus 172 ~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~-~-------~l 240 (373)
T PRK07324 172 RAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAAN-E-------EV 240 (373)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecC-H-------HH
Confidence 99999999999999999999999999888653 3333322 347899999999999999999999984 2 47
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++.... .+.+++.++|.++..+|++
T Consensus 241 i~~~~~~~~~~~~~~~~~~q~~a~~~l~~ 269 (373)
T PRK07324 241 IDILRKYRDYTMICAGVFDDMLASLALEH 269 (373)
T ss_pred HHHHHHHhCcEEecCChHHHHHHHHHHcC
Confidence 888888765 3467889999998888753
No 57
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=274.09 Aligned_cols=254 Identities=23% Similarity=0.375 Sum_probs=223.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..+++.|...+ +.++++|.+++++.+.++.+.+ +|+ .+-.++.+++++|.++++++...++.|++++|...++
T Consensus 24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 47999999998 5699999999999999987765 787 4678899999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~ 201 (311)
..++++|.++| |.|++..|.|+++....+..|.+++..|+.. .+.|.+|.+.||+.+.+ +++++++||||||||.++
T Consensus 97 ~~~I~~~T~~g-d~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw 175 (388)
T COG1168 97 SLAIRALTKPG-DGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW 175 (388)
T ss_pred HHHHHHhCcCC-CeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence 99999999999 9999999999999999999999999999874 45588899999998765 579999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC--CCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI--VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~--~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+.++|.+|.++|.+||+.||+||+|+.+++.|+++.++..++.. ++.|++.|.||+|+.+|+++++++.++++. +
T Consensus 176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l---r 252 (388)
T COG1168 176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL---R 252 (388)
T ss_pred cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH---H
Confidence 99999999999999999999999999999999888888877654 689999999999999999999999988641 1
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
.++.+++++. ....+|.++-.|...+.++
T Consensus 253 ~~~~~~l~~~--~~~~~n~lg~~A~~aAY~~ 281 (388)
T COG1168 253 AKFLKRLKRN--GLHGPSALGIIATEAAYNQ 281 (388)
T ss_pred HHHHHHHHHh--cCCCCchHHHHHHHHHHHh
Confidence 1334444433 2457888888887766543
No 58
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1e-37 Score=288.31 Aligned_cols=252 Identities=18% Similarity=0.323 Sum_probs=211.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++++|+.|+|. ...++.+.+++.+.+.......|+++.|.+++|+++++++++.+|+.++++ ++++|+|+++
T Consensus 27 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 27 RGEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 36889999999876 344667777777776555566899999999999999999998889888887 8999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCG 198 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG 198 (311)
++..++..++++| |+|++++|+|+.+...++..|.+++.++++.+.. ..+++++.++ ++++++++++|+||||
T Consensus 103 ~l~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG 178 (395)
T PRK08175 103 GLAHLMLATLDHG-DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTA 178 (395)
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 9999999999999 9999999999999988899999999998754433 4677777665 4788999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
.+++.+++++|+++|+++|++||+||+|..+.|++....++..++. .+++|+++||||.||+||+|+||++++.
T Consensus 179 ~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~----- 253 (395)
T PRK08175 179 QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP----- 253 (395)
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH-----
Confidence 9999999999999999999999999999999887655555544432 3568999999999999999999998743
Q ss_pred chhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++++.... ...++++++|.++..+|++
T Consensus 254 ---~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (395)
T PRK08175 254 ---ELVSALARIKSYHDYGTFTPLQVAAIAALEG 284 (395)
T ss_pred ---HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence 47888777654 3456788899988888764
No 59
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.7e-38 Score=297.93 Aligned_cols=288 Identities=16% Similarity=0.290 Sum_probs=218.0
Q ss_pred cchHHhhHHHHhhhhhHHHHHHHHHhh-hccC-CCCCeeecCCCCCCCCCCCCC-cHHHHHHHHHHHh-------cCCCC
Q 021547 12 EVKQELNREREAEVAAFRYAIVSLMES-VDKN-DPRPVIPLGHGDPAAFPCFRT-AAVAEDAIVDSVR-------SSMFN 81 (311)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~~~~i~~~~g~p~~~~~~~~-~~~~~~a~~~~~~-------~~~~~ 81 (311)
.+|+.+.-...-+++..+...+..... +... .+.++|+|+.+...+ .+.. ++.+++.....+. -....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (496)
T PLN02376 11 ILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIA 88 (496)
T ss_pred hhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhh
Confidence 445444443334555666555544332 2222 345799999996321 0111 3333333222110 01233
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcE
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIE 158 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~ 158 (311)
.|.+..|.++||+++++|+++.+| +.+++++|++|+|++++++.++.+|+++| |.|++++|+|+.|...++ ..|.+
T Consensus 89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pG-D~Vlv~~P~Y~~~~~~~~~~~G~~ 167 (496)
T PLN02376 89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPG-DVFLIPSPYYAAFDRDLRWRTGVE 167 (496)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCC-CEEEECCCCccchHHHHHhhCCCE
Confidence 688889999999999999998887 56899999999999999999999999999 999999999999998777 58999
Q ss_pred EEEeeccCCCCcccCHHHHHhhc------CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC
Q 021547 159 VRHFDLLPERGWEVDLEAVEALA------DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232 (311)
Q Consensus 159 ~~~~~~~~~~~~~~d~~~l~~~l------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~ 232 (311)
++.+++...++++++++.+++++ ..+++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|+
T Consensus 168 vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~ 247 (496)
T PLN02376 168 IIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA 247 (496)
T ss_pred EEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence 99999866667899999987643 247899999999999999999999999999999999999999999999887
Q ss_pred CCCCCcccccCC--------CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHH
Q 021547 233 STPYIPMGVFGS--------IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCE 304 (311)
Q Consensus 233 ~~~~~~~~~~~~--------~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 304 (311)
+.++.++..+.. ..++++++||||.|++||+|+||++++++ .+++.++.... ...+|.+.|+++
T Consensus 248 ~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~ 319 (496)
T PLN02376 248 GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLML 319 (496)
T ss_pred CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHH
Confidence 766666544411 13577899999999999999999998643 25555544443 335889999999
Q ss_pred Hhhhhc
Q 021547 305 MFLLVN 310 (311)
Q Consensus 305 ~~~l~~ 310 (311)
+++|++
T Consensus 320 ~~~L~d 325 (496)
T PLN02376 320 ASMLSD 325 (496)
T ss_pred HHHhCC
Confidence 999976
No 60
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-37 Score=283.19 Aligned_cols=276 Identities=23% Similarity=0.282 Sum_probs=220.1
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
...++++++....-..+.+.+++++|+.|+|. +++++.+.+++.+.+... ....|.+..|.+++|+++++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 88 (394)
T PRK06836 13 SSWIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNR 88 (394)
T ss_pred ccHHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHH
Confidence 34455555432211112245788999999864 567889999998877532 245798889999999999999998
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.++..+++++|++|+|+++++..++.+++++| |.|++++|+|..+...++..|++++.+++++ +++.+|++++++.++
T Consensus 89 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~~~ 166 (394)
T PRK06836 89 RFGTPLTADHIVMTCGAAGALNVALKAILNPG-DEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT-DTFQPDLDALEAAIT 166 (394)
T ss_pred HhCCCCCcCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEEecCC-ccCcCCHHHHHhhcC
Confidence 88888999999999999999999999999999 9999999999999999999999999999754 347899999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH------hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK------LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~------~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 256 (311)
++++++++++|+||||.+++.+++++|+++|++ ||++||+|++|.++.+++.+...+.. ..+++|+++|+||
T Consensus 167 ~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK 244 (394)
T PRK06836 167 PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSK 244 (394)
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchh
Confidence 899999999999999999999999999999999 89999999999999887644333222 2347999999999
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 310 (311)
.|++||+|+||+++++.. .....++..+..... ...+++++.|.+++.++++
T Consensus 245 ~~~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 298 (394)
T PRK06836 245 SLSLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA 298 (394)
T ss_pred hccCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC
Confidence 999999999999986431 100012222222211 1246788899999998865
No 61
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3e-38 Score=288.44 Aligned_cols=241 Identities=20% Similarity=0.293 Sum_probs=204.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+..++|+|+.|.+. +++++.+++++.+.+.. ...| ++.|..+||+++++++ ++++++|++|+|++++
T Consensus 27 ~~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~ 93 (366)
T PRK01533 27 GDHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL------HVKMEQVLCGSGLDEV 93 (366)
T ss_pred CCCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 35689999999854 78889999999877643 2246 4578999999999998 4688999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|+.|...++..|.+++.+++. ++.+|++.+++.++++++++++++||||||.+++
T Consensus 94 i~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~ 169 (366)
T PRK01533 94 IQIISRAVLKAG-DNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVN 169 (366)
T ss_pred HHHHHHHhcCCC-CEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcC
Confidence 999999999999 999999999999999999999999999873 4468999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|++++ ++|+||+|..+.+.+.....+..++..+++|+++||||.|++||+|+||++++. ++
T Consensus 170 ~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~ 240 (366)
T PRK01533 170 DRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------EL 240 (366)
T ss_pred HHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HH
Confidence 999999999998866 677899999877654222233334455689999999999999999999999752 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++|.++|.++.++|++
T Consensus 241 ~~~l~~~~~-~~~~~~~~q~aa~~~l~~ 267 (366)
T PRK01533 241 IEKLNVVRL-PFNVSSLAQKAATIAFGD 267 (366)
T ss_pred HHHHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence 888877654 478999999999999865
No 62
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.7e-37 Score=281.67 Aligned_cols=240 Identities=24% Similarity=0.363 Sum_probs=198.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~~ 121 (311)
.+.++++|+.|+|. .+.++.+.+++..... ..+|+++.|.+++|+++++++.+.+|++ +++++|++|+|+++
T Consensus 25 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~ 97 (364)
T PRK07865 25 HPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKE 97 (364)
T ss_pred cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHH
Confidence 46679999999864 4557888888876543 2379998999999999999999988986 89999999999999
Q ss_pred HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
++..++.++ +++| |.|+++.|+|+.|...++..|.+++.++ +.+.++ ..+++++++++|+||||.+
T Consensus 98 ~i~~~~~~l~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~---~~~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 98 LVAWLPTLLGLGPG-DVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELG---PQRPALIWLNSPSNPTGRV 164 (364)
T ss_pred HHHHHHHHHcCCCC-CEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCC---cccceEEEEcCCCCCCCcc
Confidence 999988888 7999 9999999999999999999999988774 122222 2578999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc---CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~---~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
++.+++++|+++|+++|++||+||+|..+.+++.....+... ...+++|+++||||.|++||+|+||++++.
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~----- 239 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP----- 239 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH-----
Confidence 999999999999999999999999999988865332222111 123579999999999999999999998753
Q ss_pred chhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 278 QKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 278 ~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++... ....+++.+.|.++.++|++
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 270 (364)
T PRK07865 240 ---ALVAELLEVRKHAGMMVPAPVQAAMVAALGD 270 (364)
T ss_pred ---HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC
Confidence 4777777653 34567899999999998865
No 63
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=7.5e-37 Score=283.04 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=197.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.+.++++|+.|+|. +++++.+.+++.+.+.+. ....|.+..|.++||+++++++.+. .+++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G 103 (402)
T TIGR03542 31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG 103 (402)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence 46789999999864 577888999998877642 2357988899999999999987432 378899999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCc-----------EEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI-----------EVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+++++..++ .++.+| |+|+++.|+|..|...++..|. +++.++...++++..+.+. .+++++
T Consensus 104 a~~al~~l~-~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~ 176 (402)
T TIGR03542 104 AKCDVFRLQ-SLFGSD-NTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDI 176 (402)
T ss_pred cHHHHHHHH-HhcCCC-CEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceE
Confidence 999999865 455789 9999999999999999999999 8888887544455555321 257899
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G 266 (311)
+++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++..++. .+++|+++||||.||+||+|+|
T Consensus 177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG 256 (402)
T TIGR03542 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG 256 (402)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence 999999999999999999999999999999999999999998876543344444443 3578999999999999999999
Q ss_pred EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|++++.+........+...+... .....++|.++|.+++.++++
T Consensus 257 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 301 (402)
T TIGR03542 257 WTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAG 301 (402)
T ss_pred EEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcC
Confidence 99986421000000011333222 222346788999998888764
No 64
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-37 Score=282.63 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=203.8
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhcC--CCCCCCCCEEEeCChHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPLARRAVAEYLNRDL--PYKLSADDIYITLGCMEA 122 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~--g~~~~~~~v~~t~g~~~a 122 (311)
.+++|+.|.|. +++++.+.+++.+.+..+. ...|++ .|..+||+++++|+++.+ |+.+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 58999999864 7788999999998776542 346855 699999999999998876 567899999999999999
Q ss_pred HHHHHHHHhcCCCC-EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCC
Q 021547 123 VEIILTVITRLGAA-NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPC 197 (311)
Q Consensus 123 ~~~~~~~l~~~g~d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~npt 197 (311)
+..++.+++.+| | +|+++.|+|..|...++..|++++.++++ .+++++|++++++.++ .+++++++++|||||
T Consensus 104 l~~~~~~~~~~g-~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPT 181 (374)
T PRK02610 104 IRSLLIATCLGG-EGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPT 181 (374)
T ss_pred HHHHHHHHcCCC-CCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCC
Confidence 998888888777 6 89999999999999999999999999864 3458899999998876 488999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
|.+++.+++++++++|+ +++||+||+|..+.+. . .+..+....++|+++||||.||+||+|+||++++.
T Consensus 182 G~~~s~~~l~~l~~~~~--~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~----- 250 (374)
T PRK02610 182 GNPLTAAELEWLRSLPE--DILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP----- 250 (374)
T ss_pred CCCCCHHHHHHHHhccC--CcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecCH-----
Confidence 99999999999998873 9999999999987542 1 12233344578999999999999999999999743
Q ss_pred chhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 278 QKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... .+++|.++|.++..++++
T Consensus 251 ---~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~ 279 (374)
T PRK02610 251 ---ELIAVLEKVRL-PYNLPSFSQLAAQLALEH 279 (374)
T ss_pred ---HHHHHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence 47777776653 356789999999988864
No 65
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.2e-37 Score=280.02 Aligned_cols=242 Identities=18% Similarity=0.278 Sum_probs=203.2
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..++++|+.|.+. .++++.+.+++.+.+. ...+|++ .+..+||+++++++ ++++++|++|+|+++++
T Consensus 18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~--~~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 84 (354)
T PRK06358 18 KNMILDFSANINP----LGVPESLKQAITENLD--KLVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELI 84 (354)
T ss_pred ccceEEecCCCCC----CCCCHHHHHHHHHHHH--hhhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 3458999998753 4567899999988764 3457865 46899999999998 46889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.++ .+ +.|+++.|+|+.|...++..|.+++.+++..++++.+| +++.+.+..+++++++++|+||||.+++.
T Consensus 85 ~~~~~~~--~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~ 160 (354)
T PRK06358 85 FNIVKVT--KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISK 160 (354)
T ss_pred HHHHHHh--CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCH
Confidence 9999987 34 58999999999999999999999999998656677889 66666566679999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++++|+++|+++|++||+||+|..+.+++.+...+..++..+++|+++||||.|++||+|+||++++++ .++
T Consensus 161 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~ 233 (354)
T PRK06358 161 EEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLA 233 (354)
T ss_pred HHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence 9999999999999999999999999988764443444455567899999999999999999999998653 367
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+.+..... .++++.++|.++..+|++
T Consensus 234 ~~~~~~~~-~~~~~~~~q~~~~~~l~~ 259 (354)
T PRK06358 234 EKLLQMRE-PWSINTFADLAGQTLLDD 259 (354)
T ss_pred HHHHHhCC-CCcchHHHHHHHHHHhcc
Confidence 77777654 467899999999998864
No 66
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-37 Score=288.78 Aligned_cols=216 Identities=20% Similarity=0.319 Sum_probs=176.8
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc-CCCCC-C--CCCEEEeCChH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD-LPYKL-S--ADDIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~-~g~~~-~--~~~v~~t~g~~ 120 (311)
.++|+|+.|.|+ +++++.+.++. +.+.. .+|+++.|.+++|+++++++.++ ++... . .++|++|+|++
T Consensus 100 ~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~ 171 (527)
T PRK09275 100 RDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGT 171 (527)
T ss_pred HHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 357999999965 67788888854 44432 26999999999999999966543 33222 2 34899999999
Q ss_pred HHHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHcCcE--EEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 121 EAVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRNHIE--VRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 121 ~a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
+++..++.+ ++++| |+|++++|+|+.|...++..|.. ++.++...+++|.+|.++++++++++++++++++|
T Consensus 172 ~al~~~~~aL~~~~ll~pG-D~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP 250 (527)
T PRK09275 172 AAMCYIFDSLKENGLLKAG-DKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNP 250 (527)
T ss_pred HHHHHHHHHHhhhhcCCCC-CEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCC
Confidence 999999886 67899 99999999999999998888654 45555445567999999999999999999999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 194 CNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+||||.+++.+++++|+++|++ +|++||+||+|..+.+. +.++... ...++|++.||||.|+++|||+||++++
T Consensus 251 ~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 251 SNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 9999999999999999999965 49999999999997642 2333222 2358999999999999999999999987
Q ss_pred CC
Q 021547 272 DP 273 (311)
Q Consensus 272 ~~ 273 (311)
..
T Consensus 327 ~~ 328 (527)
T PRK09275 327 ED 328 (527)
T ss_pred ch
Confidence 54
No 67
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.2e-37 Score=284.69 Aligned_cols=255 Identities=30% Similarity=0.486 Sum_probs=214.3
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV 123 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~ 123 (311)
++|+|+.|++......+++++..+++.+ .........|++..|.+++|+++++++++..|+..+++ +|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999987643223355666666555 33445567999999999999999999997788888899 999999999999
Q ss_pred HHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCC
Q 021547 124 EIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP 196 (311)
Q Consensus 124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~np 196 (311)
..++..+ ..+| |+|+++.|+|+.|...++..|++++.+++...+++.+|++.|++.+++ +++++++++|+||
T Consensus 82 ~~~~~~~~~~~~-~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP 160 (363)
T PF00155_consen 82 FLLLRLLKINPG-DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP 160 (363)
T ss_dssp HHHHHHHHSSTT-SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred hhhhhccccccc-ccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccc
Confidence 9999999 7899 999999999999999999999999999987778899999999998876 5789999999999
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCC
Q 021547 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNG 275 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~ 275 (311)
||..++.+++++|+++|+++|++||+||+|+.+.++...+.+ ...++...++|+++|+||.||++|+|+||++++.
T Consensus 161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~--- 237 (363)
T PF00155_consen 161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP--- 237 (363)
T ss_dssp TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH---
T ss_pred cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh---
Confidence 999999999999999999999999999999999987543322 3444555569999999999999999999999943
Q ss_pred ccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 276 VLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++........ +.+.|.++++++.+
T Consensus 238 -----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~ 266 (363)
T PF00155_consen 238 -----ELIERLRRFQRSGLS-SSPMQAAAAAALSD 266 (363)
T ss_dssp -----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHH
T ss_pred -----hhhhhhhhccccccc-cchhhHHHHHhhhc
Confidence 488888888664333 88889888888764
No 68
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=8.9e-37 Score=284.99 Aligned_cols=241 Identities=18% Similarity=0.208 Sum_probs=200.2
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
..+++|+.|.|. .+++|.+.+++.+.... ...|+++.|..+||+++++++....+ .+++|++|+|+++++.
T Consensus 85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence 357889999864 44556677887775542 34799999999999999999976322 3469999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe-CCCCCCccCCCH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII-NPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~ 203 (311)
.++.+++++| |.|++++|+|..|...++..|++++.++++. + ++|++.+++++++++++++++ +||||||.+++.
T Consensus 156 ~~~~~l~~pg-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~ 231 (431)
T PRK15481 156 RLLCAHLLPG-DSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA 231 (431)
T ss_pred HHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence 9999999999 9999999999999999999999999998742 2 489999999888788998887 999999999999
Q ss_pred HHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
+++++|+++|+++ +++||+||+|..+.+++. ...+. . ..+++|+++||||.|+ ||+|+||++++. ++
T Consensus 232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~~-~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~ 299 (431)
T PRK15481 232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVIP-Q-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT 299 (431)
T ss_pred HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCCc-C-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence 9999999999999 999999999999876532 12222 1 2358999999999999 999999999853 37
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++..... ...++|.++|.+++.+|++
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 328 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLVYACLTD 328 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHhC
Confidence 777765533 3356899999999999976
No 69
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-37 Score=280.01 Aligned_cols=244 Identities=19% Similarity=0.285 Sum_probs=205.1
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..++|+.|.|. +++++.+++++.+.+.. .....|++ .|.++||+++++|+++.+|+++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 56999999854 68899999999988753 23457865 5889999999999999889999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |.|+++.|+|..|...++..|.+++.++. .+++++|++.+++.++ .+++++++++|+||||.+++
T Consensus 102 ~~~~~~~~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~ 178 (368)
T PRK03317 102 QQLLQAFGGPG-RTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALP 178 (368)
T ss_pred HHHHHHhcCCC-CEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence 99999999999 99999999999999999999999888765 3467899999999886 47889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++| +++||+||+|..+.+++.. ..+...+..+++|+++||||.||++|+|+||++++. ++
T Consensus 179 ~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~ 246 (368)
T PRK03317 179 LDDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AV 246 (368)
T ss_pred HHHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HH
Confidence 88888887766 7999999999998766532 222222334589999999999999999999999743 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.+..... .+++|+++|+++.++|++
T Consensus 247 ~~~l~~~~~-~~~~s~~~~~a~~~~l~~ 273 (368)
T PRK03317 247 VDALRLVRL-PYHLSAVTQAAARAALRH 273 (368)
T ss_pred HHHHHhcCC-CCCCCHHHHHHHHHHhhC
Confidence 777776553 567899999999888864
No 70
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.9e-36 Score=281.60 Aligned_cols=279 Identities=15% Similarity=0.143 Sum_probs=197.3
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCC-CCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGD-PAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~-p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
...+.|+.+.+.. +....+..++|+.|. |... .. ..-+.+.+++...+..+...+|.+..|.++||+++++++
T Consensus 30 ~~~~~i~~~~~~~----~~~~~~~~l~l~~g~~p~~~-~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~ 104 (423)
T PLN02397 30 APPDPILGVTEAF----LADPSPVKLNLGVGAYRTEE-GKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLA 104 (423)
T ss_pred CCCChHHHHHHHH----hhCCCcceEecccceeeCCC-CCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHH
Confidence 3444566655432 223467889999996 4421 11 123456666555444444557999999999999999999
Q ss_pred hhcCCCCCCCCCEEE--eCChHHH--HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHH
Q 021547 101 NRDLPYKLSADDIYI--TLGCMEA--VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA 176 (311)
Q Consensus 101 ~~~~g~~~~~~~v~~--t~g~~~a--~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 176 (311)
.+..+.....++|.. +.+++++ +...+..++.+| |+|++++|+|+.|...++..|.+++.+++...+++++|++.
T Consensus 105 ~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~ 183 (423)
T PLN02397 105 YGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPG-STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG 183 (423)
T ss_pred cCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCC-CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHH
Confidence 765443333344421 2233333 444444445699 99999999999999999999999999987544557899998
Q ss_pred HHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccCC-CCCeEE
Q 021547 177 VEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFGS-IVPVIT 250 (311)
Q Consensus 177 l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~~-~~~~i~ 250 (311)
+++.+. ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++ .++.++..+.. ..++|+
T Consensus 184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~ 263 (423)
T PLN02397 184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV 263 (423)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence 877664 467788888999999999999999999999999999999999999999864 12233333322 347999
Q ss_pred EecCcccCCCCcceeeEEE--eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 251 LGSISKRWIVPGWRFGWLA--TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++||||.|+++|+|+||++ +++++ .. ..+.+.++.... ...+++.+.|.+++++|++
T Consensus 264 ~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~ 323 (423)
T PLN02397 264 AQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGD 323 (423)
T ss_pred EEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence 9999999999999999986 32221 10 013344444432 3456788999999998865
No 71
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-36 Score=276.83 Aligned_cols=240 Identities=20% Similarity=0.346 Sum_probs=201.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++|+|+.|++. +++++.+.+++.+.+.. ...|++ .|.++||+++++++ ++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~a 94 (357)
T PRK14809 28 DPDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGA 94 (357)
T ss_pred CccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 36789999999854 66778888998887652 447864 68999999999998 4688999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |.|++++|+|..|...++..|.+++.+++..++++.++.+.+.+.. ++++++++++|+||||.+++
T Consensus 95 l~~~~~~~~~~g-d~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s 172 (357)
T PRK14809 95 LDYLARAMLDPG-DTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIP 172 (357)
T ss_pred HHHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCC
Confidence 999999999999 9999999999999888999999999998865567788888887765 36899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|++ +++||+||+|..+.+++ . .+..+...+++|+++||||.|++||+|+||+++++ ++
T Consensus 173 ~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-~--~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~ 240 (357)
T PRK14809 173 LDEVEALAERTDE-ETLVVVDEAYGEFAERP-S--AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EW 240 (357)
T ss_pred HHHHHHHHHhCcc-CcEEEEechhhhccCCc-h--hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HH
Confidence 9999999999875 78999999999987643 2 12223345689999999999999999999999864 37
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++..... ..+++.++|.++.++|++
T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~a~~~l~~ 267 (357)
T PRK14809 241 ADAYARVNT-PFAASELACRAGLAALDD 267 (357)
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHhCC
Confidence 777777654 457789999998888754
No 72
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.9e-36 Score=277.55 Aligned_cols=265 Identities=25% Similarity=0.313 Sum_probs=201.4
Q ss_pred hhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHh
Q 021547 26 AAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLN 101 (311)
Q Consensus 26 ~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~ 101 (311)
..+...+..+.+.. ..+++|+|+.|+|... .++.+.+.+++.+.+... ....|+++.|.++||++++++++
T Consensus 14 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~ 88 (416)
T PRK09440 14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLN 88 (416)
T ss_pred hcHHHHHHHHHHHh---cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence 34444444443333 3467899999998632 122356777777766532 33579999999999999999999
Q ss_pred hcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----CCCCEEEe-cCCCCcchHHHHHHcCc----EEEEeeccCCC--C
Q 021547 102 RDLPYKLSADDIYITLGCMEAVEIILTVITR-----LGAANILL-PRPGWPFYESFAKRNHI----EVRHFDLLPER--G 169 (311)
Q Consensus 102 ~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----~g~d~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~ 169 (311)
+.+|+++++++|++|+|+++++.+++.+++. +| |.|++ ..|+|+.|...+...+. ....+++ ..+ +
T Consensus 89 ~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~g-d~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~ 166 (416)
T PRK09440 89 ERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSL-KKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFK 166 (416)
T ss_pred HHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCC-CeEEEecCCCchhhHHHhhccCceeecccccccc-cccccc
Confidence 9899999999999999999999999999985 58 99999 79999999876654442 2222232 222 4
Q ss_pred cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
+.+|++.++ +.++++++++++||||||.+++.+++++|+++|+++|++||+||+|+.+... ........ ...+++|
T Consensus 167 ~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~-~~~~~vI 242 (416)
T PRK09440 167 YHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-IIFSEATP-LWNPNII 242 (416)
T ss_pred cCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-cchhhcCc-cccCCeE
Confidence 678999887 3567899999999999999999999999999999999999999999853211 11111111 1146899
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++||||. ++||+|+||++++. ++++++..... ...++|.++|.+++++|++
T Consensus 243 ~~~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 295 (416)
T PRK09440 243 LCMSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIES 295 (416)
T ss_pred EEeccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhcc
Confidence 99999996 99999999999753 47777777654 3457899999999999875
No 73
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-36 Score=277.63 Aligned_cols=240 Identities=20% Similarity=0.282 Sum_probs=203.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..++++|+.|.+. +++++.+.+++.+.+.. . .|.+..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 4589999999864 55688899999887653 2 5666679999999999999 35778999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+++++| |+|++++|+|+.|...+...|.+++.+++. ++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 95 ~~~~~~~~~~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~ 170 (359)
T PRK03158 95 QMISRALLNPG-TNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNH 170 (359)
T ss_pred HHHHHHHhCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999 999999999999999999999999999874 45789999999888899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++.++++.|+ +|++||+||+|..+.+++.....+...+..+++|+++||||.|+++|+|+||++++. +++
T Consensus 171 ~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~ 241 (359)
T PRK03158 171 EELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELI 241 (359)
T ss_pred HHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHH
Confidence 98888888774 699999999999988765333333333445689999999999999999999999753 477
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++..... .+++|+++|.+++++|++
T Consensus 242 ~~~~~~~~-~~~~~~~~q~~~~~~l~~ 267 (359)
T PRK03158 242 EKLNIARP-PFNTTRIAQYAAIAALED 267 (359)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence 88877655 357899999999999864
No 74
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.9e-35 Score=269.55 Aligned_cols=240 Identities=23% Similarity=0.344 Sum_probs=198.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~~ 121 (311)
.++.+++|+.|+|. .+.++.+.+++++... ...|+++.|.++||+++++++.+++|++ +++++|++|+|+++
T Consensus 19 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~ 91 (357)
T TIGR03539 19 HPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKE 91 (357)
T ss_pred CCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHH
Confidence 46789999999864 5567888888887653 3479999999999999999999988986 99999999999999
Q ss_pred HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
++..++..+ +++| |.|+++.|+|+.|...++..|.+++.++ +.+.+. .++++++++++|+||||.+
T Consensus 92 ~i~~~~~~l~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~ 158 (357)
T TIGR03539 92 LVAWLPTLLGLGPG-DTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV 158 (357)
T ss_pred HHHHHHHHHcCCCC-CEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence 999999888 6899 9999999999999999999999888763 222222 3578999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc--c-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV--F-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~--~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
++.+++++|+++|+++|++||+||+|..+.|++.+...+.. . ....++|+++||||.|+++|+|+||++++.
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~----- 233 (357)
T TIGR03539 159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP----- 233 (357)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence 99999999999999999999999999988876533222211 0 113479999999999999999999998642
Q ss_pred chhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...+++.++|.++.++|++
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 264 (357)
T TIGR03539 234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD 264 (357)
T ss_pred ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC
Confidence 47777766543 3467899999999998864
No 75
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=276.05 Aligned_cols=243 Identities=21% Similarity=0.340 Sum_probs=200.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|.|. +.+++.+.+++.+... ...+|++..| .++|+++++++ ++++++|++|+|++++
T Consensus 34 ~~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 100 (371)
T PRK05166 34 GVPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDL 100 (371)
T ss_pred CCcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46789999999764 4567888888887543 2457998888 59999999998 3578899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |.|+++.|+|..+...++..|++++.++.. .++++|++++++.++++++++++++|+||||.+++
T Consensus 101 l~~~~~~~~~~g-d~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 177 (371)
T PRK05166 101 IAVICRAVLRPG-DRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLT 177 (371)
T ss_pred HHHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 999999999999 999999999999999999999999999874 34678999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|++ +++||+||+|..+.+++..+..+..+. ..+++|+++||||.|+++|+|+||++++++ +
T Consensus 178 ~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~ 249 (371)
T PRK05166 178 ADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------E 249 (371)
T ss_pred HHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------H
Confidence 9999999999875 899999999999886542222222222 235799999999999999999999887653 3
Q ss_pred HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.++.... ..++|.++|.++..++.+
T Consensus 250 l~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 277 (371)
T PRK05166 250 LVGLLDRVRT-PFNVNGAAQAAALAALDD 277 (371)
T ss_pred HHHHHHHhcc-CCCCCHHHHHHHHHHhcC
Confidence 7777766554 456899999887777653
No 76
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.6e-35 Score=277.39 Aligned_cols=216 Identities=20% Similarity=0.308 Sum_probs=172.6
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH-HHHhhcCCCC-CCCC--CEEEeCChH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVA-EYLNRDLPYK-LSAD--DIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~l~~~~g~~-~~~~--~v~~t~g~~ 120 (311)
.++|+|+.|+|+ +++++.+ .++.+..... +|+++.|..+++++++ +|+.+.++.. ...+ +|++|+|++
T Consensus 94 ~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat 165 (521)
T TIGR03801 94 RDIISYVIDQLG----FDPDAFL-YEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT 165 (521)
T ss_pred HHHHhhcCCCCC----CCCCHHH-HHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 457999999976 5555444 5555554322 6877677777777777 5666655433 3333 899999999
Q ss_pred HHHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHc--CcEEEEeeccCCCC-----cccCHHHHHhhcCCCccEE
Q 021547 121 EAVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRN--HIEVRHFDLLPERG-----WEVDLEAVEALADENTAAI 188 (311)
Q Consensus 121 ~a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~-----~~~d~~~l~~~l~~~~~~i 188 (311)
+++..++.+ ++++| |+|+++.|+|++|...++.. |.+++.++.....+ |.+|.++++++++++++++
T Consensus 166 ~al~~~~~~l~~~~ll~pG-D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai 244 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKG-DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKAL 244 (521)
T ss_pred HHHHHHHHHHhHhhcCCCC-CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEE
Confidence 999999887 67899 99999999999999988776 56777777644333 8899999999888899999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
++++|+||||.+++.+++++|+++|++| |++||+||+|+.+.+ .+.++... ..+++|+++||||.|+++|||+|
T Consensus 245 ~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG 320 (521)
T TIGR03801 245 FVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE-LPYNTIGVYSFSKYFGATGWRLG 320 (521)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh-CCCCEEEEEcchhhccCchhhhh
Confidence 9999999999999999999999999987 999999999998775 22333332 23489999999999999999999
Q ss_pred EEEeeCC
Q 021547 267 WLATNDP 273 (311)
Q Consensus 267 ~i~~~~~ 273 (311)
|++++..
T Consensus 321 ~i~~~~~ 327 (521)
T TIGR03801 321 TIALHKD 327 (521)
T ss_pred hhhcCch
Confidence 9998653
No 77
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-35 Score=269.37 Aligned_cols=243 Identities=23% Similarity=0.357 Sum_probs=206.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+.++|+|+.+.+. +++++.+.+++.+.+.......|.++.|.+++|+++++++ ++++++|++|+|+++++
T Consensus 27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al 96 (380)
T PRK06225 27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL 96 (380)
T ss_pred cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence 4689999999753 6788999999999987655667988889999999999998 35778999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++.+| |+|++++|+|..+...++..|.+++.+++.. .+++.+|++.+++.++++++++++++|+||||.+++
T Consensus 97 ~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~ 175 (380)
T PRK06225 97 YLVMRAFLSPG-DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYT 175 (380)
T ss_pred HHHHHHhcCCC-CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCC
Confidence 99999999999 9999999999999889999999999998743 345789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|+++|+||+|..+..+. . +...++ .++++++.||||.||++|+|+||++++. ++
T Consensus 176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l 243 (380)
T PRK06225 176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DL 243 (380)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HH
Confidence 9999999999999999999999998765422 1 112222 3578999999999999999999999853 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++.++.......+++.++|.++...++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~a~~~l~ 270 (380)
T PRK06225 244 IEVVKSIVINDLGTNVIAQEAAIAGLK 270 (380)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 777776644356778899999877765
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-35 Score=270.49 Aligned_cols=241 Identities=20% Similarity=0.337 Sum_probs=198.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++.++++|+.|.+. +++|+.+++++.+.+.. ...|++ .+..++|+++++++ ++++++|++|+|++++
T Consensus 18 ~~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 18 SPDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES 84 (356)
T ss_pred ChhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 36789999999754 67889999999887653 236765 46899999999998 4578999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.++ .+| + +++..|+|..|...++..|.+++.+++..++++.+| +++.+.+.++++++++++|+||||.+++
T Consensus 85 l~~~~~~l-~~g-~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~ 160 (356)
T PRK08056 85 IFAVVSGL-KPR-R-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPE 160 (356)
T ss_pred HHHHHHHh-CCC-C-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCC
Confidence 99999987 567 6 677899999999999999999999998666667777 4455556788999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|++++++||+||+|.++.+++..+.+. +...+++|+++||||.|+++|+|+||++++++ ++
T Consensus 161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~ 231 (356)
T PRK08056 161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AA 231 (356)
T ss_pred HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HH
Confidence 9999999999999999999999999987765333222 22345899999999999999999999998543 36
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .++++.++|+++..++++
T Consensus 232 ~~~l~~~~~-~~~~~~~~~~~a~~~l~~ 258 (356)
T PRK08056 232 VARMRRQQM-PWSINAFAALAGEVILQD 258 (356)
T ss_pred HHHHHHhCC-CCchhHHHHHHHHHHhCC
Confidence 677766543 457788999998888753
No 79
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-35 Score=264.06 Aligned_cols=237 Identities=22% Similarity=0.362 Sum_probs=206.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+++++|+.+... +++++.+.+++.+.+. ..+.|+++ ...++++++++++.. .++++|++++|+++.+
T Consensus 21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i 88 (356)
T COG0079 21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELI 88 (356)
T ss_pred CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHH
Confidence 3469999999632 6778999999988776 45578876 789999999999952 5788999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++++++.+| |+|+++.|+|..|...++..|.+++.++..+ |.+|++.+.+.+.++++++++||||||||..++.
T Consensus 89 ~~l~~~~~~~g-d~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~ 164 (356)
T COG0079 89 ELLVRAFVEPG-DTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPR 164 (356)
T ss_pred HHHHHHhhcCC-CEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999 9999999999999999999999999998753 8899999999888899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
++++++++.+.+ +.+||+||+|.+|.- ..... .....+|+|+++||||.||++|+|+||++++. +++
T Consensus 165 ~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~~~--l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i 231 (356)
T COG0079 165 EELRALLEALPE-GGLVVIDEAYIEFSP--ESSLE--LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELI 231 (356)
T ss_pred HHHHHHHHhCCC-CcEEEEeCchhhcCC--chhhh--hccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHH
Confidence 999999999998 999999999999763 22222 22245579999999999999999999988743 589
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+.+.+.+. .+++|.++|+++.++|++
T Consensus 232 ~~l~~vr~-p~~v~~~a~~aa~aal~~ 257 (356)
T COG0079 232 AALNKVRP-PFNVSSPALAAAIAALRD 257 (356)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHccc
Confidence 99999987 568999999999998875
No 80
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1e-34 Score=265.15 Aligned_cols=239 Identities=15% Similarity=0.198 Sum_probs=191.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+..++|+|+.+.+. +++++.+.+++.+.+.. ...|+++ +..+||+++++++ ++++++|++|+|++++
T Consensus 20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~ 86 (360)
T PRK07392 20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL 86 (360)
T ss_pred CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 45678999999643 67788999998877653 4578875 5689999999999 4688999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCc---ccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGW---EVDLEAVEALADENTAAIVIINPCNPCGN 199 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~i~i~~p~nptG~ 199 (311)
+.+++.++. +| |.|+++.|+|..|...++..|.+++.++++.+.++ ..+++.+++.. .+++++++++||||||.
T Consensus 87 i~~~~~~l~-~g-~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~ 163 (360)
T PRK07392 87 LTWAGRELA-QL-RAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGK 163 (360)
T ss_pred HHHHHHHhC-CC-CeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCC
Confidence 999999875 68 89999999999999999999999999998655443 34666666543 46889999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+++.++ |.++++++++ +|+||+|..+.+++.....+..++..+++|+++||||.|++||+|+||++++.
T Consensus 164 ~~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~------- 232 (360)
T PRK07392 164 LWSREA---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP------- 232 (360)
T ss_pred CcCHHH---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-------
Confidence 999555 5555667775 67799999988765332223334445689999999999999999999999853
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... .+++|.++|.++.++|++
T Consensus 233 -~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~ 261 (360)
T PRK07392 233 -DRLQRWQQWRD-PWPVNGLAAAAAIAALAD 261 (360)
T ss_pred -HHHHHHHhhCC-CCCCCHHHHHHHHHHhcc
Confidence 36777766553 467899999999999875
No 81
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1e-34 Score=287.65 Aligned_cols=248 Identities=17% Similarity=0.282 Sum_probs=203.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~ 121 (311)
++.++|+|+.|++. +++|+.+++++.+.+... ++ ..|.+++|+++++++.+.+|++.++ ++|++|+|+++
T Consensus 695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 46799999999964 788999999999877532 22 3467789999999999999988864 58999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCC-CCCcc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPC-NPCGN 199 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~-nptG~ 199 (311)
++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++..++++.+|.+.+++.+++ +.+++++++|+ ||||.
T Consensus 766 lL~lll~aLl~pG-D~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~ 844 (1082)
T PLN02672 766 LFNKLVLCCVQEG-GTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL 844 (1082)
T ss_pred HHHHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence 9999999999999 999999999999999999999999999986667899999999998876 45689999997 99999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC--Cccc----ccCC---CCCeEEEecCcccCCCCcceeeEEEe
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY--IPMG----VFGS---IVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~--~~~~----~~~~---~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+++.+++++|+++|++||++||+||+|+.+.|++.+. .++. .++. ..++|+++||||.|+++|+|+||+++
T Consensus 845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa 924 (1082)
T PLN02672 845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL 924 (1082)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence 9999999999999999999999999999998875431 1111 1221 23799999999999999999999998
Q ss_pred eCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 308 (311)
+++ .+++.+...... ..+...+|.+++.++
T Consensus 925 p~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaaal 954 (1082)
T PLN02672 925 NDS-------VLIDAFHSAPGL-SRPHSTLKYTIKKLL 954 (1082)
T ss_pred CCH-------HHHHHHHHhhhh-cCCCcHHHHHHHHHH
Confidence 653 377777765332 233344565555443
No 82
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=8.1e-35 Score=266.32 Aligned_cols=236 Identities=20% Similarity=0.218 Sum_probs=194.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+++++|+.|.+. +++++.+.+++.+.... ...|+++ +..+||+++++++ ++++++|++|+|+++++
T Consensus 42 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai 108 (370)
T PRK09105 42 AEGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPL 108 (370)
T ss_pred CCCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHH
Confidence 4678999999853 67889999999887653 2368765 4899999999987 46889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+++++| |+|++++|+|..|...++..|.+++.++... ++.+|.+.+++. .++++++++++||||||.+++.
T Consensus 109 ~~~~~~l~~~g-d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~ 184 (370)
T PRK09105 109 NYAVLAFTSPT-AGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPR 184 (370)
T ss_pred HHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCH
Confidence 99999999999 9999999999999999999999999998743 567899999876 4678999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
++++++++.++ ++++||+||+|..+.. .+ ......+..+++|+++||||.||++|+|+||++++. +++
T Consensus 185 ~~l~~l~~~~~-~~~~lIvDEaY~~f~~--~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i 252 (370)
T PRK09105 185 ADIEWLLANKP-AGSVLLVDEAYIHFSD--AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLL 252 (370)
T ss_pred HHHHHHHHhCC-CCcEEEEECchHHhcc--Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHH
Confidence 99999998754 5999999999987542 11 112222335689999999999999999999999753 377
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++... . ...++.++|.++.++|++
T Consensus 253 ~~l~~~-~-~~~~~~~~~~aa~~~L~~ 277 (370)
T PRK09105 253 AKLARF-G-HNPLPVPAAAAGLASLRD 277 (370)
T ss_pred HHHHhc-C-CCCcCHHHHHHHHHHHhC
Confidence 777766 2 345788888888887764
No 83
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4.7e-35 Score=266.57 Aligned_cols=239 Identities=20% Similarity=0.292 Sum_probs=200.6
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+.+|+|+.+.+. +++++.+.+++.+.+. ....|+ ..|..++|++++++++ +++++|++|+|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~-~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAA--GVNRYP-DMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHH--hcCcCC-CCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHH
Confidence 578999999865 5667889999988765 234675 4799999999999994 57789999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
.++..++++| |+|+++.|+|..|...++..|.+++.++..+ ++.++++.+++.++++++++++++|+||||.+++.+
T Consensus 89 ~~~~~~~~~g-d~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 165 (352)
T PRK03321 89 QLVQATAGPG-DEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA 165 (352)
T ss_pred HHHHHhcCCC-CEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence 9999999999 9999999999999999999999999998753 367899999999988999999999999999999988
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG 284 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 284 (311)
++.++++.+ +++++||+||+|..+.+++....++..++..+++++++||||.|++||+|+||++++. ++++
T Consensus 166 ~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 236 (352)
T PRK03321 166 ELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIA 236 (352)
T ss_pred HHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHH
Confidence 777777765 4699999999999988865433344444455689999999999999999999999853 4788
Q ss_pred HHhhhhccccCCCchhHHHHHhhhh
Q 021547 285 SIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+..... ..++|.++|.++.+.|+
T Consensus 237 ~~~~~~~-~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 237 ALRKVAV-PFSVNSLAQAAAIASLA 260 (352)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHhc
Confidence 8776643 56789999998877764
No 84
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-34 Score=262.07 Aligned_cols=237 Identities=20% Similarity=0.329 Sum_probs=195.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+..++|+.|.+. +++|+.+.+++.+.+.......|++. +..++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l 89 (351)
T PRK14807 21 IPYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII 89 (351)
T ss_pred CCceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence 3467999999864 78889999999988765555678764 5789999999998 45789999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |+|++++|+|..+...++..|++++.++.+ +++.+|++.+++.+++ +++++++++|+||||.+++
T Consensus 90 ~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~ 166 (351)
T PRK14807 90 HLIMLAFINKG-DVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIE 166 (351)
T ss_pred HHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC
Confidence 99999999999 999999999999999999999999999874 3467999999998865 8999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++.++ |++++.++|+||+|..+. +....++ ++..+++|+++||||.|++||+|+||++++. ++
T Consensus 167 ~~~l~~l---~~~~~~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~ 231 (351)
T PRK14807 167 REDIIKI---IEKSRGIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NI 231 (351)
T ss_pred HHHHHHH---HHhCCCEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--------HH
Confidence 6666555 456678899999998763 3222222 2334689999999999999999999999743 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .++++.++|.++.++|++
T Consensus 232 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 258 (351)
T PRK14807 232 LKYLNLVKS-PYNINSLSQVIALKVLRT 258 (351)
T ss_pred HHHHHHccC-CCCcCHHHHHHHHHHHhH
Confidence 787776654 356789999999998864
No 85
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=266.46 Aligned_cols=234 Identities=21% Similarity=0.264 Sum_probs=194.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+.++|+|+.|.+. ++++|.+.+++.... ....|++ .+..+||++++++++ +++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDSG------LESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHhC------cChhhEEEcCCHHHHH
Confidence 5689999999753 567788888876531 2235765 478999999999983 5789999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |+|+++.|+|..|...++..|.+++.++.. .++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus 117 ~~~~~~~~~~g-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~ 193 (380)
T PLN03026 117 DLLMRCVLDPG-DKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIIS 193 (380)
T ss_pred HHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Confidence 99999999999 999999999999999999999999999864 45789999999988 678999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|++.+ ++||+||+|..+.+.+. . ...+...+++|+++||||.||++|+|+||++++. ++
T Consensus 194 ~~~l~~l~~~~----~~vi~DeaY~~~~~~~~-~--~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~ 258 (380)
T PLN03026 194 DDDLLKILELP----ILVVLDEAYIEFSTQES-R--MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SI 258 (380)
T ss_pred HHHHHHHHhcC----CEEEEECcchhhcCCcc-h--HHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HH
Confidence 88888887653 89999999998876432 1 1223345689999999999999999999999853 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.+..... .++++.++|.++.++|++
T Consensus 259 i~~l~~~~~-~~~~~~~~q~aa~~aL~~ 285 (380)
T PLN03026 259 IEYLWRAKQ-PYNVSVAAEVAACAALSN 285 (380)
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHhhC
Confidence 888877765 357899999999998864
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-34 Score=265.15 Aligned_cols=236 Identities=17% Similarity=0.210 Sum_probs=197.7
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+..++|+.|++. +++++.+.+++.+... ....|+++ +..+||+++++++ ++++++|++|+|+++++.
T Consensus 32 ~~~~~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~ 98 (369)
T PRK08153 32 PFRARIGANESG----FGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLG 98 (369)
T ss_pred cceeEecCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 445799999854 7888999999988764 23468875 5899999999998 467899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~ 203 (311)
.++.+++++| |.|+++.|+|+.+...++..|.+++.++.+. ..+|++.+++.+ +.+++++++++|+||||.+++.
T Consensus 99 ~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~ 174 (369)
T PRK08153 99 LIVRLYVEPG-DPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPA 174 (369)
T ss_pred HHHHHhcCCC-CEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCH
Confidence 9999999999 9999999999999988899999999998632 257888887755 4688999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++++++++|++ +++||+||+|..+.+++. ..++.. ..+++|+++||||.|++||+|+||++++. +++
T Consensus 175 ~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~ 242 (369)
T PRK08153 175 ADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTI 242 (369)
T ss_pred HHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHH
Confidence 999999998874 999999999999877542 223322 24589999999999999999999999853 477
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+.+..... .+++|+++|+++.++|++
T Consensus 243 ~~l~~~~~-~~~~s~~~q~~~~~~l~~ 268 (369)
T PRK08153 243 KAFDKVRN-HFGMNRIAQAAALAALKD 268 (369)
T ss_pred HHHHHhhc-CCCCCHHHHHHHHHHhcC
Confidence 77777654 357899999999999864
No 87
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=264.57 Aligned_cols=241 Identities=17% Similarity=0.246 Sum_probs=184.3
Q ss_pred HHHHHHHHHHh---cCCCCCCCCCCCcHHHHHHHHHHHhhcCCC-CC-CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 66 VAEDAIVDSVR---SSMFNCYAPMFGLPLARRAVAEYLNRDLPY-KL-SADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 66 ~~~~a~~~~~~---~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~-~~-~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
.+.+++.+... .....+|.++.|.++||+++++++.+..+. .. ..++|++|+|+++++.+++.+++++| |.|++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~g-d~Vlv 98 (388)
T PRK08637 20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQG-DTVLL 98 (388)
T ss_pred chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCC-CEEEE
Confidence 34444444443 234568999999999999999999875432 11 23689999999999999999999999 99999
Q ss_pred cCCCCcchHHHH-HHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 141 PRPGWPFYESFA-KRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 141 ~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
++|+|+.|...+ ...|.+++.+++.. +++++|++.+++.++ +...++++++||||||.+++.+++++|+++|++
T Consensus 99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~ 177 (388)
T PRK08637 99 PDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKE 177 (388)
T ss_pred cCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999998875 46899999998732 334689999988776 455567788999999999999999999999875
Q ss_pred -----hCCEEEEeccccCCccCCCCCCcc-ccc-CCCCCe--EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH
Q 021547 216 -----LGILVIADEVYGHLAFGSTPYIPM-GVF-GSIVPV--ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286 (311)
Q Consensus 216 -----~~~~li~D~ay~~~~~~~~~~~~~-~~~-~~~~~~--i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~ 286 (311)
|+++||+||+|.++.|++.+..++ ..+ +..+++ ++++|+||.|++||+|+||++++.++.. .+.+++.+
T Consensus 178 ~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~--~~~l~~~~ 255 (388)
T PRK08637 178 LADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGS--SQTVKEAL 255 (388)
T ss_pred HHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCC--cHHHHHHH
Confidence 899999999999999877544332 222 233464 5567999999999999999997641000 12355555
Q ss_pred hhh-----hccccCCCchhHHHHHhhhhc
Q 021547 287 KAC-----LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 287 ~~~-----~~~~~~~~~~~q~~~~~~l~~ 310 (311)
... .....++|.++|.++..+|++
T Consensus 256 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 284 (388)
T PRK08637 256 EKKVKGLIRSNISNGPHPSQSAVLRALNS 284 (388)
T ss_pred HHHHHHHhhcccCCCCcHHHHHHHHHhCC
Confidence 431 122357899999999999875
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=263.82 Aligned_cols=237 Identities=22% Similarity=0.352 Sum_probs=198.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+.++|+|+.|.+. +++++.+++++.+.+.......|++ .|..++|++++++++. . ..++|++|+|+++++
T Consensus 25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~----~-~~~~I~~t~G~~~~i 94 (356)
T PRK04870 25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGV----P-AGADVLLGNGSDELI 94 (356)
T ss_pred CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCc----C-CCCcEEEcCCHHHHH
Confidence 5689999999853 7889999999998886555567887 5889999999999942 1 235899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.+++++| |+|+++.|+|..|...++..|.+++.++++ +++.+|++.+++.+. .+++++++++|+||||.+++
T Consensus 95 ~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 95 QLLALACAKPG-ATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHhcCCC-CEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 99999999999 999999999999999999999999999875 357899999999885 48999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++| ++++|+||+|..+.+. ...+ .+...+++|+++|||| +++||+|+||++++. ++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGD--SWLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCc--chHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence 99999999988 7899999999987543 2111 1233457999999999 799999999999753 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++.... .++++.++|.++..++++
T Consensus 236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~ 262 (356)
T PRK04870 236 IAELDKVRP-PYNVNVLTQATALFALEH 262 (356)
T ss_pred HHHHHHccC-CCcCCHHHHHHHHHHHhC
Confidence 777776653 456888999998888754
No 89
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-34 Score=263.66 Aligned_cols=241 Identities=18% Similarity=0.236 Sum_probs=201.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++++|+.+.+. +++++.+.+++.+.... ...|++.. ..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 96 (367)
T PRK02731 30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI 96 (367)
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46789999999754 45678899999887753 44787654 479999999998 3577899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |.|+++.|+|..|...++..|.+++.++. +++.+|++.+++.++++++++++++|+||||.+++
T Consensus 97 l~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 172 (367)
T PRK02731 97 LELLARAYLGPG-DEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLP 172 (367)
T ss_pred HHHHHHHhcCCC-CEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCC
Confidence 999999999999 99999999999998888999999999876 45788999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++.++++.|+ +|+++|+||+|..+.+++.....+..++..+++|+++|+||.||++|+|+||++++. ++
T Consensus 173 ~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~ 243 (367)
T PRK02731 173 AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EI 243 (367)
T ss_pred HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HH
Confidence 999988888875 599999999999887755333333333345689999999999999999999999853 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .++.++++|.++.++|++
T Consensus 244 ~~~l~~~~~-~~~~~~~~~~~a~~~l~~ 270 (367)
T PRK02731 244 IDALNRVRQ-PFNVNSLALAAAVAALDD 270 (367)
T ss_pred HHHHHHccC-CCCCCHHHHHHHHHHhCC
Confidence 777776654 346788999999998864
No 90
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-34 Score=258.52 Aligned_cols=233 Identities=24% Similarity=0.350 Sum_probs=191.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+.++|+|+.+.+. +++++.+.+++.+.+.......|++ .|.+++|++++++++ +++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFYG------LDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHhC------cCcceEEEcCCHHHHH
Confidence 4578999999854 5778899999988876444557864 699999999999994 6789999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++..+ +| |+|+++.|+|..|...++..|.+++.+++. .++.+|++.+++.+ ++++++++++|+||||.+++.
T Consensus 86 ~~~~~~~--~g-d~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~ 159 (337)
T PRK03967 86 SYLVKLF--EG-KHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPE 159 (337)
T ss_pred HHHHHHh--CC-CeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCH
Confidence 9988877 78 999999999999999899999999999875 34789999998865 578899999999999999997
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++.++ + ++++++|+||+|..+.. .+..++ ....+++|+++||||.|++||+|+||+++++ +++
T Consensus 160 ~~l~~i---~-~~~~~ii~De~y~~~~~--~~~~~~--~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i 223 (337)
T PRK03967 160 EEILKV---L-ETGKPVVLDEAYAEFSG--KSLIGL--IDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EII 223 (337)
T ss_pred HHHHHH---H-hcCCEEEEECchhhhcc--cchHHH--HhhCCCEEEEecchHhhcchhhhheeeecCH--------HHH
Confidence 666655 4 46999999999998652 222222 2234579999999999999999999999853 478
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+.++.... .+++|.++|.++..+|++
T Consensus 224 ~~~~~~~~-~~~~~~~~q~~~~~~l~~ 249 (337)
T PRK03967 224 DALYRIKP-PFSLNILTMKIVRLALDH 249 (337)
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHHhC
Confidence 88887765 357789999999998864
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-34 Score=262.12 Aligned_cols=234 Identities=18% Similarity=0.318 Sum_probs=192.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..++|+|+.|.+. +++++.+.+++.+.+... ...|++. |..++|+++++++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4678999999864 666889999998876643 3478654 6799999999999 36889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+++++| |+|+++.|+|+.|...++..|++++.++++ +++.+|++.+++ .++++++++|+||||.+++.
T Consensus 91 ~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~ 163 (353)
T PRK05387 91 AHAFLAFFNHD-RPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPL 163 (353)
T ss_pred HHHHHHhcCCC-CEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCH
Confidence 99999999999 999999999999999999999999999874 357789998864 45788999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++++|+++++ ++++|+||+|..+ .+.+..++ ....+++|+++||||.|+++|+|+||++++. +++
T Consensus 164 ~~~~~l~~~~~--~~~livDe~y~~~--~~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~ 229 (353)
T PRK05387 164 AEIERILAANP--DSVVVIDEAYVDF--GGESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELI 229 (353)
T ss_pred HHHHHHHHhCC--CcEEEEeCccccc--CCcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHH
Confidence 99999888654 9999999999874 33332222 2334579999999999999999999999743 477
Q ss_pred HHHhhhhcc--ccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGV--RSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 310 (311)
++++..... .++++.++|.++.++|++
T Consensus 230 ~~l~~~~~~~~~~~~~~~~q~~~~~~l~~ 258 (353)
T PRK05387 230 EALNRVKNSFNSYPLDRLAQAGAIAAIED 258 (353)
T ss_pred HHHHHhhccCCCCCcCHHHHHHHHHHhcC
Confidence 777776532 356789999999888864
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-33 Score=253.36 Aligned_cols=231 Identities=18% Similarity=0.278 Sum_probs=186.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++|+|+.|++. +++++.+.+++.+.+..+....|+++ |.++||+++++++++.+ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 46799999999864 78899999999887765444457654 89999999999997642 678999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.++ |.|+++.|+|+.|...++..|.+++.++++. ++.++... + ..++++++++||||||.+++
T Consensus 89 i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s 156 (335)
T PRK14808 89 IYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFE 156 (335)
T ss_pred HHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcC
Confidence 99999988 5799999999999999999999999998753 33344322 2 35689999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+ +++++||+||+|..+. +....++ +...+++|+++||||.|+++|+|+||++++. ++
T Consensus 157 ~~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~ 220 (335)
T PRK14808 157 REEIERIL----KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KF 220 (335)
T ss_pred HHHHHHHH----hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeCH--------HH
Confidence 88888876 4799999999999864 2222221 2233589999999999999999999999863 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.+..... .++++.++|.++..++++
T Consensus 221 ~~~l~~~~~-~~~~~~~~q~a~~~~l~~ 247 (335)
T PRK14808 221 IDAYNRVRL-PFNVSYVSQMFAKVALDH 247 (335)
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHHhC
Confidence 788877653 357789999998888753
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.9e-33 Score=254.21 Aligned_cols=239 Identities=23% Similarity=0.397 Sum_probs=198.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++.++|+|+.|++. ++++|.+.+++.+... ....|+++.+ .++|++++++++ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNENP----FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEI 83 (346)
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHH
Confidence 45789999999864 6778999999998764 2347877665 899999999994 567899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|+.+...++..|.+++.+++.. ++.+|++.+++.+.++++++++++|+||||.+++
T Consensus 84 l~~~~~~l~~~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~ 160 (346)
T TIGR01141 84 IELLIRAFLEPG-DAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLS 160 (346)
T ss_pred HHHHHHHhcCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCC
Confidence 999999999999 9999999999999889999999999998753 3678999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++.++++.++ +|+++|+|++|+.+.+.+. ...+ ....+++|+++|+||.|+++|+|+||++++. ++
T Consensus 161 ~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~~--~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~ 228 (346)
T TIGR01141 161 RSDIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLPL--LAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EI 228 (346)
T ss_pred HHHHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHHH--HhhCCCEEEEehhhHhhhchhhhceeeecCH--------HH
Confidence 888888888877 7999999999997664321 1111 1223468999999999999999999999742 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++++.... .++.++++|.++.+++++
T Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 255 (346)
T TIGR01141 229 IDALNKVRA-PFNLSRLAQAAAIAALRD 255 (346)
T ss_pred HHHHHhccC-CCCCCHHHHHHHHHHhCC
Confidence 777776654 356789999999888764
No 94
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=3.8e-32 Score=243.31 Aligned_cols=218 Identities=17% Similarity=0.240 Sum_probs=175.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+.++|+|+.+.+. ++ |+.+.+++.+.+.. ...|+. ...+|+++++++. ++|++|+|++++
T Consensus 6 ~~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~a 66 (311)
T PRK08354 6 REEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEA 66 (311)
T ss_pred CccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHH
Confidence 45779999999532 33 47888888877653 336753 4679999998883 379999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++..+ .+| |+|+++.|+|..|...++..|.+++.++ +|++.+++.++ +++.+++++|+||||.+++
T Consensus 67 l~~~~~~~-~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~ 135 (311)
T PRK08354 67 LYLIGILA-LRD-RKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYN 135 (311)
T ss_pred HHHHHHhh-CCC-CeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccC
Confidence 99888655 489 9999999999999999999999997653 47888888776 5678999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|+++|+||+|.++.+++... ..+++|+++||||.|++||+|+||+++ +
T Consensus 136 ~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~ 197 (311)
T PRK08354 136 FKELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------F 197 (311)
T ss_pred HHHHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------h
Confidence 9999999999999999999999999988764211 145899999999999999999999997 2
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+.++.... .+..+.++|.++..+++
T Consensus 198 ~~~l~~~~~-~~~~~~~~~~~~~~~~~ 223 (311)
T PRK08354 198 EEAFRSVRM-PWSIGSTGYAFLEFLIE 223 (311)
T ss_pred HHHHHHcCC-CccCCHHHHHHHHHHHH
Confidence 344554443 33456677777777665
No 95
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-32 Score=250.07 Aligned_cols=235 Identities=22% Similarity=0.344 Sum_probs=190.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~a 122 (311)
+.++|+|+.+++. ++++|.+.+++.+.... ...|+++. ..++|+++++++ ++++++|++ |+|++++
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 4589999999753 56788888888877653 34677654 499999999998 457889999 7899999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|..+...++..|++++.++. ..++.+|++.+++.++++++++++++|+||||.+++
T Consensus 100 i~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~ 176 (361)
T PRK00950 100 IDTLMRTFIDPG-DEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIP 176 (361)
T ss_pred HHHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcC
Confidence 999999999999 99999999999998889999999998874 345789999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+ ++.++|+++|+++|+|++|..+. +.+...+ ....+++++++||||.||+||+|+||++++. ++
T Consensus 177 ~~---~l~~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~ 241 (361)
T PRK00950 177 EE---DIRKILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WL 241 (361)
T ss_pred HH---HHHHHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HH
Confidence 55 55556678899999999999865 2222222 1233578999999999999999999999753 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... ..+.++++|+++..++++
T Consensus 242 ~~~~~~~~~-~~~~~~~~~~~a~~~l~~ 268 (361)
T PRK00950 242 IDYYMRAKT-PFSLTRLSQAAAIAALSD 268 (361)
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence 777777654 345788999988888764
No 96
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=4.1e-32 Score=244.97 Aligned_cols=218 Identities=19% Similarity=0.204 Sum_probs=171.7
Q ss_pred CCCeeecCCC-CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 44 PRPVIPLGHG-DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
..++|+|+.+ +|. .+.++.+.+ ..+ ..|+. +..+||+++++++. .++|++|+|++++
T Consensus 19 ~~~~i~l~~ne~p~----~~~~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~it~Gs~~a 76 (330)
T PRK05664 19 LADWLDLSTGIAPW----PWPVPAIPA---DAW-----ARLPE--TDDGLEAAARAYYG--------APQLLPVAGSQAA 76 (330)
T ss_pred HHHheeecCCcCCC----CCCCcccCH---HHH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEECcCHHHH
Confidence 3468999999 432 112122221 122 14754 33899999999993 4799999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++. +.+| |+|++++|+|+.|...++..|.+++.++. +++++.++ +++++++++||||||.+++
T Consensus 77 l~~~~~--~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s 142 (330)
T PRK05664 77 IQALPR--LRAP-GRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFD 142 (330)
T ss_pred HHHHHH--ccCC-CEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccC
Confidence 998753 5799 99999999999999999999999998865 23444443 6788999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|+++|++||+||+|..+. +..++..+...+++|+++||||.|++||+|+||++++. ++
T Consensus 143 ~~~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l 210 (330)
T PRK05664 143 PARLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------AL 210 (330)
T ss_pred HHHHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HH
Confidence 9999999999999999999999998653 21234445555689999999999999999999999853 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.+..... .++.+.++|.++.++|++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~L~~ 237 (330)
T PRK05664 211 LRALAELLG-PWTVSGPTRWLAQAALAD 237 (330)
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHHhC
Confidence 888877654 346788999999998865
No 97
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-33 Score=251.03 Aligned_cols=231 Identities=20% Similarity=0.322 Sum_probs=185.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
...++|+.+.+. +++++.+ .......|+.. ...++++++++++ ++++++|++|+|+++++.
T Consensus 28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~ 88 (351)
T PRK01688 28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIE 88 (351)
T ss_pred CCceEecCCCCC----CCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 356999998743 4445432 11234467664 4578999999887 468899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
.++.+++++|.|.|+++.|+|..|...++..|++++.+++. .++.+|++.+++.+ ++++++++++||||||..++.+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~ 165 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ 165 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence 99999988854899999999999999999999999999874 35789999999887 5899999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG 284 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 284 (311)
++++|++.|++ +.+||+||+|..+.... .. ...+...+++|+++||||.||++|+|+||++++. ++++
T Consensus 166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~-s~--~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~ 233 (351)
T PRK01688 166 DLRTLLELTRG-KAIVVADEAYIEFCPQA-SL--AGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN 233 (351)
T ss_pred HHHHHHHhCCC-CcEEEEECchhhcCCCC-Ch--HHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence 99999999986 68999999999876321 11 1222345689999999999999999999999743 4778
Q ss_pred HHhhhhccccCCCchhHHHHHhhhhc
Q 021547 285 SIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
.++.... .++++.++|.++.++|++
T Consensus 234 ~l~~~~~-~~~v~~~~~~~a~~~L~~ 258 (351)
T PRK01688 234 LLLKVIA-PYPLSTPVADIAAQALSP 258 (351)
T ss_pred HHHhccC-CCCCCHHHHHHHHHHHhc
Confidence 7777654 356788888888888764
No 98
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-32 Score=248.80 Aligned_cols=211 Identities=19% Similarity=0.332 Sum_probs=175.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEE
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEV 159 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~ 159 (311)
...|+++ +..+||+++++++ ++++++|++|+|+++++.+++.+++.+|.|.|+++.|+|..|...++..|.++
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 3468765 4799999999998 35789999999999999999999988874589999999999999899999999
Q ss_pred EEeeccC-CCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547 160 RHFDLLP-ERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI 237 (311)
Q Consensus 160 ~~~~~~~-~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~ 237 (311)
+.+++.. .+++.+|++.+.+ ..+++++++++++|+||||.+++.+++++++++|+ ++++||+||+|..+.+.. .
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~-~-- 201 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP-S-- 201 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc-c--
Confidence 9999743 3456788888765 44678999999999999999999999999999886 489999999999987532 1
Q ss_pred cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
.+...+..+++|+++||||.|++||+|+||++++. ++++.+..... .++.+.++|.++..+|++
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~~~l~~~~~-~~~~~~~~~~~a~~~l~~ 265 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELIAVLRRCQA-PYPVPTPCAALAEQALSA 265 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhc
Confidence 12223345689999999999999999999999753 47888887765 457789999999888865
No 99
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-31 Score=240.16 Aligned_cols=229 Identities=17% Similarity=0.221 Sum_probs=183.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++++|+.+.+. +++++.+++++.+.+.. ...|++..|..++|+++++++ ++++++|++|+|++++
T Consensus 20 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~a 87 (349)
T PRK07908 20 AGPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEG 87 (349)
T ss_pred CCCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 36889999999854 66788899999887653 347988889999999999998 3578999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++. + .+| .+++..|+|..+...++..|.+++.++++. ++.+|.+.+ +++++++++++|+||||.+++
T Consensus 88 l~~~~~-l-~~~--~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~ 157 (349)
T PRK07908 88 FALLAR-L-RPR--RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHP 157 (349)
T ss_pred HHHHHh-c-CCC--eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcC
Confidence 999888 4 555 567789999999999999999999998753 367888754 457889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++ .++|+ ++.++|+||+|..+.+ +. ..++... ..+++|+++||||.|+++|+|+||++++. ++
T Consensus 158 ~~~l---~~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~ 222 (349)
T PRK07908 158 AEQL---LALRR-PGRILVVDEAFADAVP-GE-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DV 222 (349)
T ss_pred HHHH---HHHHh-cCCEEEEECcchhhcc-CC-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HH
Confidence 6654 55565 4889999999998754 32 3344333 23479999999999999999999999753 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++.+..... .+..+++.|.++..+++
T Consensus 223 ~~~~~~~~~-~~~~~~~~~~a~~~~~~ 248 (349)
T PRK07908 223 LARLTRGRA-HWPVGTLQLEAIAACCA 248 (349)
T ss_pred HHHHHhcCC-CCCccHHHHHHHHHHhc
Confidence 787776644 35677888888887765
No 100
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-32 Score=235.32 Aligned_cols=223 Identities=25% Similarity=0.398 Sum_probs=194.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcC
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNH 156 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g 156 (311)
...|.+-.|++++|+++|+++.+..| ...+++++++++|+|+++++++.+|++|| |.-|+|.|.|+++..-++ +.|
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpg-dafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPG-DAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCC-ceeeecCCCCCcccccceeccC
Confidence 33688888999999999999987554 46689999999999999999999999999 999999999999865443 578
Q ss_pred cEEEEeeccCCCCcccCHHHHHhhcC------CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 157 IEVRHFDLLPERGWEVDLEAVEALAD------ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++.....+++.++.+.||++++ .+.++++++||+||.|.+++++++..|++++.++|+.+|+||+|+.-+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 89999999888999999999998764 378999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccC-----CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHH
Q 021547 231 FGSTPYIPMGVFG-----SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEM 305 (311)
Q Consensus 231 ~~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 305 (311)
|+...+.++..+. ..+++-++.|+||-||+||+|+|.|...+. ++++..+.+..+ ..+|+..|+.++
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmssf-~~vSs~tQ~~la 344 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSSF-GLVSSQTQYLLA 344 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhhc-cCCcHHHHHHHH
Confidence 9877777754442 344689999999999999999999987664 477777777664 468999999999
Q ss_pred hhhhcC
Q 021547 306 FLLVNK 311 (311)
Q Consensus 306 ~~l~~~ 311 (311)
.+|+|+
T Consensus 345 ~LLSD~ 350 (471)
T KOG0256|consen 345 SLLSDE 350 (471)
T ss_pred HHhchH
Confidence 999873
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.5e-31 Score=240.52 Aligned_cols=220 Identities=15% Similarity=0.175 Sum_probs=170.6
Q ss_pred CCCeeecCCCCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTA-AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~-~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
...+++|+.+... ++++ +.+. . ..+ ..|+.+ . .+||++++++++- ..+++|++|+|++++
T Consensus 23 ~~~~i~ls~Nenp----~~~~~~~~~-~--~~~-----~~Yp~~-~-~~L~~~ia~~~~~-----~~~~~I~i~~Gs~e~ 83 (339)
T PRK06959 23 YDAWLDLSTGINP----HGYPVPPVP-A--DAW-----RRLPED-D-DGLAACAARYYGA-----PDAAHVLPVAGSQAA 83 (339)
T ss_pred hhhhceeccCCCC----CCCCCCCCC-H--HHH-----HhCCCc-h-HHHHHHHHHHhCC-----CCcccEEECcCHHHH
Confidence 3568999999632 2222 1111 1 122 258764 3 8999999999942 135899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.++.. ++++| + |+++.|+|+.|...++..|.+++.++.+. +. +.+..+.+++++||||||.+++
T Consensus 84 i~~l~~-~~~~g-~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~----~~~~~~~v~l~nPnNPTG~~~s 148 (339)
T PRK06959 84 IRALPA-LLPRG-R-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DT----LPAALTHLIVVNPNNPTAERLP 148 (339)
T ss_pred HHHHHH-hcCCC-e-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hh----ccccCCEEEEeCCCCCCCCCCC
Confidence 997765 46777 6 88999999999999999999999886531 22 2234578999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|++.|.+++.++|+||+|.++.+. .++..+...+++|+++||||.|++||+|+||++++. ++
T Consensus 149 ~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~l 216 (339)
T PRK06959 149 AARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------AL 216 (339)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HH
Confidence 999999999999999999999999987642 223333334679999999999999999999999853 48
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++|.++|.++.++|++
T Consensus 217 i~~l~~~~~-~~~vs~~~q~a~~~~L~~ 243 (339)
T PRK06959 217 LAALRDALG-AWTVSGPARHAVRAAFAD 243 (339)
T ss_pred HHHHHHhcC-CCCCcHHHHHHHHHHhCc
Confidence 888888765 456799999999999875
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-32 Score=246.18 Aligned_cols=230 Identities=19% Similarity=0.316 Sum_probs=182.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+...++|+.+.+. +++++.+ . .. ....|++. +..+||+++++++ ++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~ne~~----~~~~~~~-----~-~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i 90 (354)
T PRK04635 30 GRGDIWINANESP----FNNEYKL-----D-LA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI 90 (354)
T ss_pred CCCcEEeeCCCCC----CCCChhh-----h-hH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 3567999999754 4444432 1 11 23468775 5899999999987 46889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+++++|.|+|+++.|+|..|...++..|.+++.+++. .++.+|.+.++. + ++++++++++|+||||.+++.
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~ 166 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR 166 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence 999999998775789999999999999999999999999874 346788888874 3 689999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++++|++.|+ +++||+||+|..+... .....+ ....+++|+++||||.|+++|+|+||++++. +++
T Consensus 167 ~~l~~l~~~~~--~~~vivDeay~~~~~~-~s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~ 233 (354)
T PRK04635 167 ADIEQLIEMTP--DAIVVVDEAYIEFCPE-YSVADL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELI 233 (354)
T ss_pred HHHHHHHHhCC--CcEEEEeCchHhhccC-cchHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHH
Confidence 99999998876 4999999999987532 111112 2234689999999999999999999998753 477
Q ss_pred HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 284 GSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+.+..... .++.+.+.|.++.++|++
T Consensus 234 ~~l~~~~~-~~~~~~~~~~~a~~~l~~ 259 (354)
T PRK04635 234 EILMRVIA-PYPVPLPVSEIATQALSE 259 (354)
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHHhc
Confidence 77776544 356777888888887754
No 103
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.98 E-value=5.2e-31 Score=238.02 Aligned_cols=214 Identities=20% Similarity=0.229 Sum_probs=166.3
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
.+|+|+.+... ++. ......|+. ....+||+++++++ ++.+++|++|+|+++++..
T Consensus 17 ~~i~l~~Nenp----~~~-------------~~~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~ 72 (332)
T PRK06425 17 RIIDFSANIND----FMD-------------IGDISIYPE-ISYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR 72 (332)
T ss_pred CEEEeccccCC----CcC-------------hhhcccCcC-cCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 68999999632 110 012346865 35799999999999 4578899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547 126 ILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 126 ~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~ 205 (311)
++.. +++| + |+++.|+|..|...++..|.+++.++++. +..+.+.+++ .+++++++++||||||.+++.++
T Consensus 73 ~~~~-~~~~-~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~ 143 (332)
T PRK06425 73 LLSY-INVG-N-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDS 143 (332)
T ss_pred HHHH-hCCC-c-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHH
Confidence 9974 5667 5 66779999999999999999999998753 3456555543 47899999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS 285 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 285 (311)
+++|+++|+++|++||+||+|.++.+++.+ .........+++|+++||||.|++||+|+||++++. ++++.
T Consensus 144 ~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~ 214 (332)
T PRK06425 144 LLTISEICRKKGALLFIDEAFIDFVPNRAE-EDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKI 214 (332)
T ss_pred HHHHHHHHHHcCCEEEEecchhccccccch-hHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHH
Confidence 999999999999999999999998875421 112222334689999999999999999999999853 47777
Q ss_pred HhhhhccccCCCchhHH
Q 021547 286 IKACLGVRSGPSTLIQV 302 (311)
Q Consensus 286 ~~~~~~~~~~~~~~~q~ 302 (311)
++.... .+..+.+++.
T Consensus 215 l~~~~~-~~~~~~~~~~ 230 (332)
T PRK06425 215 SRKITE-PWSVCDPAID 230 (332)
T ss_pred HHHcCC-CCccCHHHHH
Confidence 776544 2334444433
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.97 E-value=1.6e-30 Score=234.73 Aligned_cols=224 Identities=20% Similarity=0.291 Sum_probs=180.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
..+++++|+.|.+.. +++ ..+... ....+|+++.+ +++|++++++++ +++++|++|+|++++
T Consensus 15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~G~~~~ 76 (330)
T TIGR01140 15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYYG------LPAASVLPVNGAQEA 76 (330)
T ss_pred ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHhC------CChhhEEECCCHHHH
Confidence 367899999997542 222 122111 12347887665 999999999983 568899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.++ .+| .|++++|+|..|...++..|++++.++ |++.+++.+ ++++++++++|+||||.+++
T Consensus 77 i~~~~~~l-~~g--~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~ 143 (330)
T TIGR01140 77 IYLLPRLL-APG--RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL-EELDVLVLCNPNNPTGRLIP 143 (330)
T ss_pred HHHHHHHh-CCC--eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCC
Confidence 99987764 566 599999999999999999999998875 778888887 46789999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|+++|++||+|++|..+.+.. ++..+ +..+++|+++|+||.||++|+|+||++++. +
T Consensus 144 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~ 211 (330)
T TIGR01140 144 PETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------A 211 (330)
T ss_pred HHHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------H
Confidence 9999999999999999999999999876531 22222 234679999999999999999999999853 4
Q ss_pred HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.+..... ..++|+++|.++.++|++
T Consensus 212 ~~~~l~~~~~-~~~~s~~~q~~~~~~l~~ 239 (330)
T TIGR01140 212 LLARLREALG-PWTVNGPARAAGRAALAD 239 (330)
T ss_pred HHHHHHhcCC-CCCchHHHHHHHHHHHhc
Confidence 7777777654 456789999999999875
No 105
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.9e-30 Score=217.12 Aligned_cols=270 Identities=26% Similarity=0.375 Sum_probs=205.9
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAE 98 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 98 (311)
..-++|+++++++.+.+ +.++.|+++.|+|...|. ......+...+.+.++ ...+|..++|...|.++++.
T Consensus 11 t~~sGi~~lMdDl~d~L---rt~g~imLggGNPa~iPe--m~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~ 85 (417)
T COG3977 11 TRHSGITQLMDDLNDGL---RTPGAIMLGGGNPARIPE--MDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAK 85 (417)
T ss_pred hhhhhHHHHHHHHHhhc---cCCCceeeCCCCcccChh--HHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHH
Confidence 66789999999999998 567799999999875432 1233344445555543 24489999999999999999
Q ss_pred HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc---CC-CCEEEec-CCCCcchHHHHHHcCcEEEE---eeccCCCC-
Q 021547 99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITR---LG-AANILLP-RPGWPFYESFAKRNHIEVRH---FDLLPERG- 169 (311)
Q Consensus 99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~---~g-~d~Vl~~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~- 169 (311)
++++++||+++++||.+|+|++.+++.++..+.. .| ..+|++| .|.|.+|..+.-.-.+-+.. +++.+...
T Consensus 86 ~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~F 165 (417)
T COG3977 86 MLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQF 165 (417)
T ss_pred HHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccce
Confidence 9999999999999999999999999999999954 22 1467776 79999986543322222111 11122222
Q ss_pred -cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 170 -WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 170 -~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
+.+|.+.|+ +.+++.+++++.|.||||.+++++++.+|.+++++||+.+++|++|+. .|.+-.+..+. +.-.+|+
T Consensus 166 KY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~-~~w~~Ni 241 (417)
T COG3977 166 KYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDAT-PLWNENI 241 (417)
T ss_pred eeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceeccccc-ccCCCCE
Confidence 445655554 357899999999999999999999999999999999999999999995 12222222211 2236689
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|.|.|+||. |+||.|+|.+++.. ++++.+..+.+ .+..++.+.|++++++|++
T Consensus 242 ilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~ 295 (417)
T COG3977 242 ILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIES 295 (417)
T ss_pred EEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhc
Confidence 999999998 99999999999853 58888888865 5778999999999999875
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.97 E-value=1.1e-28 Score=223.56 Aligned_cols=251 Identities=33% Similarity=0.513 Sum_probs=201.6
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~ 127 (311)
|||+.|++. +..++.+...+...........|.+..|..++++.+++++...++.....+++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888854 3445555555544222334457888899999999999999988777667889999999999999999
Q ss_pred HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547 128 TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 128 ~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
.++.++| |+|+++.++|.++...++..|.+++.++.........+.+.++....++++++++++++||||..++.++++
T Consensus 77 ~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 77 RALLNPG-DEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred HHhCCCC-CEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHH
Confidence 9999999 999999999999999999999999999875443332223666767778999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK 287 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~ 287 (311)
+|+++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|++|.++.+|.|+||++++++ ++.+.++
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~ 228 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLK 228 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHH
Confidence 999999999999999999998877654332222334455689999999999889999999998642 3677777
Q ss_pred hhhc-cccCCCchhHHHHHhhhhc
Q 021547 288 ACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 288 ~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
.... ...+++..+|.++..+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~l~~ 252 (350)
T cd00609 229 KLLPYTTSGPSTLSQAAAAAALDD 252 (350)
T ss_pred HHHHhcccCCChHHHHHHHHHHhC
Confidence 7644 3468889999998888764
No 107
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.97 E-value=2.5e-29 Score=221.25 Aligned_cols=284 Identities=21% Similarity=0.267 Sum_probs=211.5
Q ss_pred ccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHH---------------
Q 021547 5 AEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAED--------------- 69 (311)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~--------------- 69 (311)
.+++.++.++.+.+. ...+.++.+.....+ .+.++|+|+.|-|... .++......+
T Consensus 4 ~~~dys~~ls~es~s---rk~~p~~~~~~~~s~-----~~i~~i~lagGlPnp~-~fp~~~~s~~p~~~~~~e~~~~~~~ 74 (472)
T KOG0634|consen 4 PPKDYSHHLSKESAS---RKLSPLRALGDIKSA-----SPISIISLAGGLPNPD-YFPIRSDSIKPQGSWKKENGKKLNN 74 (472)
T ss_pred CcccHHHHhcccccc---cccChHHHhhhHhhc-----CCCceEEecCCCCCCC-cccccccccccccCccccccccccc
Confidence 456677777755555 666677766653322 3455899999955411 1333222222
Q ss_pred ---HHHHHHhc-----CCCCCCCCCCCcHHHHHHHHHHHh-hcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 70 ---AIVDSVRS-----SMFNCYAPMFGLPLARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 70 ---a~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~l~-~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
++.....+ ....+|++..|.++|+..+.+... ..+......-+|++|+|.+.+++.+++.+++.| |.|++
T Consensus 75 ~~~~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~g-d~vli 153 (472)
T KOG0634|consen 75 VTFAFENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRG-DHVLI 153 (472)
T ss_pred eeeeccccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCC-CceEE
Confidence 00000011 124589999999999999999655 222333344589999999999999999999999 99999
Q ss_pred cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---C-----ccEEEEeCC--CCCCccCCCHHHHHHHH
Q 021547 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---N-----TAAIVIINP--CNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~-----~~~i~i~~p--~nptG~~~~~~~l~~l~ 210 (311)
..++|++-....+..|++++.|++ +..++++|.|++.+.. . ...|+.+-| +||||..++.+..++|.
T Consensus 154 e~~ty~~AL~s~~a~gv~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy 230 (472)
T KOG0634|consen 154 EEYTYPSALQSMEALGVKIIPVKM---DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIY 230 (472)
T ss_pred ecccchHHHHhccccCceEEeccc---cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHH
Confidence 999999999999999988888876 3457899999997653 1 134566655 79999999999999999
Q ss_pred HHHHHhCCEEEEeccccCCccCC--------CC-----------CCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 211 ETARKLGILVIADEVYGHLAFGS--------TP-----------YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~~~~~~--------~~-----------~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
++|++|+++||+||.|..+.|+. .+ ..++..+|.++|||...||||. .+||+|+||+.++
T Consensus 231 ~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~ 309 (472)
T KOG0634|consen 231 QLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGN 309 (472)
T ss_pred HHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecC
Confidence 99999999999999999988862 11 2234556778999999999999 5899999999986
Q ss_pred CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
.. +++++-+..+ .+.++|.++|.++.++|+.
T Consensus 310 ~~--------~l~ril~~ae~~t~~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 310 SL--------FLKRILDLAEVATSGPSGFSQGIVYAMLKR 341 (472)
T ss_pred HH--------HHHHHhhhcceeecCcccccHHHHHHHHHH
Confidence 52 6777766644 4577999999999988763
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=6.2e-27 Score=218.65 Aligned_cols=242 Identities=17% Similarity=0.114 Sum_probs=181.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAA---VAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~---~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.+.++|+|+.|+|. +.+.+++ .+.+++.+++..+. .+|.+..|..+||++++++++ .+++++|+|+
T Consensus 34 ~g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~gg 102 (460)
T PRK13238 34 AGYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQG 102 (460)
T ss_pred cCCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCH
Confidence 48899999999983 1244444 67888777776544 479999999999999999994 3579999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC------CCcc--cCHHHHHhhcCC----CccE
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE------RGWE--VDLEAVEALADE----NTAA 187 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~d~~~l~~~l~~----~~~~ 187 (311)
++|+.+++.+++++| | |+++.|.|..|...++..|.+++.+++... ++|. +|++.|++.+++ ++++
T Consensus 103 t~A~~~~~~all~pG-D-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~ 180 (460)
T PRK13238 103 RAAEQILFPVLIKKG-D-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPF 180 (460)
T ss_pred HHHHHHHHHHhCCCC-C-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeE
Confidence 999999999999999 9 999999999999999999999999988542 3444 999999999873 6899
Q ss_pred EEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEecccc--CCccCC-----CCCCcccccCCCCCeEEEecCcccCC
Q 021547 188 IVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYG--HLAFGS-----TPYIPMGVFGSIVPVITLGSISKRWI 259 (311)
Q Consensus 188 i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~--~~~~~~-----~~~~~~~~~~~~~~~i~i~s~sK~~~ 259 (311)
+++++|+||+| .+++.+++++|.++|++||++||+|+++. ...|.. ....++..+ ++.++|++|.+.
T Consensus 181 Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~ 255 (460)
T PRK13238 181 IVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLT 255 (460)
T ss_pred EEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEE
Confidence 99999999997 99999999999999999999999999773 243421 122222211 123345555555
Q ss_pred CCccee------eEEEeeCCCCccchhhHHHHHhhhh----c-cccCC-CchhHHHHHhhhh
Q 021547 260 VPGWRF------GWLATNDPNGVLQKSGIVGSIKACL----G-VRSGP-STLIQVCEMFLLV 309 (311)
Q Consensus 260 ~~G~r~------G~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~q~~~~~~l~ 309 (311)
++|+|+ |+++++++ ++.++++... + .+.+. +...|.+++..|+
T Consensus 256 ~Sg~K~g~~~~GG~i~~~d~-------~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~ 310 (460)
T PRK13238 256 MSAKKDAMVNIGGLLCFRDE-------DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLY 310 (460)
T ss_pred EecccCCCCcceeEEEcChH-------HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHH
Confidence 555554 35555432 4777776653 2 23333 4444777776554
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.9e-25 Score=194.06 Aligned_cols=271 Identities=24% Similarity=0.362 Sum_probs=209.3
Q ss_pred HHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCC---------------------cHHHHHHHHHHHh--cCCCCCCCCC
Q 021547 30 YAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRT---------------------AAVAEDAIVDSVR--SSMFNCYAPM 86 (311)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~---------------------~~~~~~a~~~~~~--~~~~~~Y~~~ 86 (311)
++-+++... .+..-+.+|+-++|+|..-.+.|. |..+++...+.+. .+..-.|+.+
T Consensus 34 El~~eL~~~-~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gGs~GaYS~S 112 (475)
T KOG0258|consen 34 ELEKELKKG-VKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGGSLGAYSDS 112 (475)
T ss_pred HHHHHHHhc-ccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCCcccccccc
Confidence 444444443 333457788888888753222211 1122222233333 2345579999
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 165 (311)
.|++-+|+.||+|+.++.|.+.++++|++|+|++.|+..++..++. +. +.|++|.|.|+-|...+..+|...+.+-++
T Consensus 113 qGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~-~GvliPiPQYPLYsAti~l~~~~~v~YyLd 191 (475)
T KOG0258|consen 113 QGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKK-TGVLIPIPQYPLYSATISLLGGTQVPYYLD 191 (475)
T ss_pred cCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCC-CceEeecCCCchhHHHHHHhCCcccceeec
Confidence 9999999999999999999999999999999999999999999985 55 899999999999999999999999999999
Q ss_pred CCCCcccCHHHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcc
Q 021547 166 PERGWEVDLEAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPM 239 (311)
Q Consensus 166 ~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~ 239 (311)
.+.+|.+|.++|++.+.+ +++++++.||.||||.+++.+.+++|+.+|.+++++++.||+|....|.+ .++.++
T Consensus 192 Ee~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSf 271 (475)
T KOG0258|consen 192 EESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSF 271 (475)
T ss_pred cccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhH
Confidence 999999999999987653 78899999999999999999999999999999999999999999988864 355554
Q ss_pred ccc----C----CCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhh
Q 021547 240 GVF----G----SIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFL 307 (311)
Q Consensus 240 ~~~----~----~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 307 (311)
... . +..-++..+|.||.+-. .|.|-||+-+-+.. ++..+.+....+...|++...|..+-..
T Consensus 272 KKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~Kl~si~lc~~V~GQ~~vdl~ 343 (475)
T KOG0258|consen 272 KKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIKKLASIKLCPQVSGQKLVDLV 343 (475)
T ss_pred HHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHHHHHhhhhcCCccchhhhcee
Confidence 322 1 12237899999998644 68999998775532 3466666666555567777777765443
No 110
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.5e-25 Score=192.64 Aligned_cols=281 Identities=19% Similarity=0.207 Sum_probs=212.9
Q ss_pred HhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547 22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
+++...|..+.+. +.+...++.||+++|.. +.....|.-+.|.++-+.........+|-+-.|.+++++.+++++
T Consensus 7 ~~p~DpIlgL~e~----f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll 82 (396)
T COG1448 7 AAPADPILGLKEA----FKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL 82 (396)
T ss_pred cCCCCchhHHHHH----HhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh
Confidence 3566777777765 33346789999999932 222346677888888777777777778999999999999999999
Q ss_pred hhcCCCC---CCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547 101 NRDLPYK---LSADDI--YITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD 173 (311)
Q Consensus 101 ~~~~g~~---~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 173 (311)
+|.+ +..+++ +-|.|||+|+......+.. +. .+|.+++|+|+++..+++..|.++..+|..+..+..+|
T Consensus 83 ---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~-~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~d 158 (396)
T COG1448 83 ---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPD-ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLD 158 (396)
T ss_pred ---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCC-ceEEeCCCCcHhHHHHHHhcCCceeeeecccccccccc
Confidence 5533 344555 5589999999999998865 44 57999999999999999999999999999877777899
Q ss_pred HHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccCCCC-Ce
Q 021547 174 LEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFGSIV-PV 248 (311)
Q Consensus 174 ~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~~~~-~~ 248 (311)
.+.+.+.++. +...++-..+|||||.-++.++|++|+++.++.+++.+.|-+|++|.-+-. ....+..+.... .+
T Consensus 159 f~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~ 238 (396)
T COG1448 159 FDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPEL 238 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcE
Confidence 8888776653 333334444599999999999999999999999999999999999754311 111222222222 38
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhcC
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVNK 311 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~ 311 (311)
++..|+||+||+.|.|+|.+.+..++... ...+.++++.. ++..++|+.-...+++.+|+|.
T Consensus 239 lva~S~SKnfgLYgERVGa~~vva~~~~~-a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p 301 (396)
T COG1448 239 LVASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNP 301 (396)
T ss_pred EEEehhhhhhhhhhhccceeEEEeCCHHH-HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCH
Confidence 99999999999999999997765443222 12355566655 4556788899999999998873
No 111
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=2.3e-24 Score=199.13 Aligned_cols=213 Identities=16% Similarity=0.145 Sum_probs=163.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---Cc----HHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---GL----PLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
+++++|+|+.|++ ++++.+|.+++++.+.+..... +|+.+. |. .++|++++++++ .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 4788999999984 4678899999999998875322 565555 65 788999999884 257888
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEE
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIV 189 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~ 189 (311)
++|+++|+..++.+++++| |.|+++.|.|+.+...++..+.+.+.++ ..|++++++.+++ ++++++
T Consensus 104 ~~~~~~a~~~~~~~l~~~g-d~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~ 175 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAE-DAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIA 175 (393)
T ss_pred ECchHHHHHHHHHHhCCCC-CEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEE
Confidence 8899999999999999999 9999999999999988888887665442 2688888887764 677888
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
+.+++||||.+.+ +++|+++|++||++||+|++|+...++ +........+. .+..++++|+||.+ +|+|+||
T Consensus 176 ~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~ 249 (393)
T TIGR01822 176 TDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGF 249 (393)
T ss_pred EeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEE
Confidence 8888999999988 999999999999999999999643222 11111111111 23469999999985 4789999
Q ss_pred EEeeCCCCccchhhHHHHHhhh
Q 021547 268 LATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++++. ++++.++..
T Consensus 250 ~~~~~--------~~~~~l~~~ 263 (393)
T TIGR01822 250 TTARK--------EVVELLRQR 263 (393)
T ss_pred EEeCH--------HHHHHHHHh
Confidence 88753 366666553
No 112
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.93 E-value=1.3e-24 Score=200.59 Aligned_cols=223 Identities=17% Similarity=0.117 Sum_probs=173.7
Q ss_pred CCCCeeecCCCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDP--AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+.+++.|..+++ ++.....+ ..+.+++..++..+.. .|.++.|..+||+++++++. .+++++|+|++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt 78 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGR 78 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHH
Confidence 4899999999998 53322222 4666666666655443 69999999999999999994 35899999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC--------CcccCHHHHHhhcCCC----ccEE
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADEN----TAAI 188 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~----~~~i 188 (311)
+|+.+++.+++++| |.| ++.|.|..+...+...|.+++.+++.... .+.+|++.|++.++++ +++|
T Consensus 79 ~Al~la~~al~~pG-D~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 79 GAENILFSILLKPG-RTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHhCCCC-CEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 99999999999999 977 68999999999999999999999986543 2459999999998865 7889
Q ss_pred EEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--Ccc-----CCCCCCcccccCCCCCeEEEecCcccCCC
Q 021547 189 VIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--LAF-----GSTPYIPMGVFGSIVPVITLGSISKRWIV 260 (311)
Q Consensus 189 ~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~-----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 260 (311)
++++|+||+ |+.++.++++++.++|++||++||+|+++.. ..| ++....++.. .++.++|++|.+.+
T Consensus 157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m 231 (431)
T cd00617 157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM 231 (431)
T ss_pred EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence 999999998 9999999999999999999999999999542 222 1222222221 13456677777777
Q ss_pred Ccce------eeEEEeeCCCCccchhhHHHHHhhh
Q 021547 261 PGWR------FGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 261 ~G~r------~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
.|+| .||++++++ +++++++.+
T Consensus 232 S~~K~~~~~~GG~i~~~d~-------~l~~~~~~~ 259 (431)
T cd00617 232 SAKKDGLVNIGGFLALRDD-------ELYEEARQR 259 (431)
T ss_pred EeecCCCCccceEEEeCcH-------HHHHHHHHh
Confidence 7776 468888653 377777753
No 113
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=1.1e-23 Score=193.91 Aligned_cols=272 Identities=17% Similarity=0.129 Sum_probs=179.5
Q ss_pred cccccchHHhhHHHHhhhhh-HHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCC
Q 021547 8 KWGFEVKQELNREREAEVAA-FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYA 84 (311)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~ 84 (311)
+|..+++...+++|.++.-+ ++-+.+.--.++. .+++++|+|+.+++ +++.++|.+++++.+.+.... ...|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~ 77 (385)
T PRK05958 2 SWLDRLEAALAQRRAAGLYRSLRPREGGAGRWLV-VDGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSR 77 (385)
T ss_pred cHHHHHHHHHHHHHHcCCCccccccccCCCceeE-eCCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcC
Confidence 58888877777766655332 2222222223333 36899999999863 245678899999999886421 11233
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
...|...+++.+++.+.+.++ . ++.++++++++++..++..++++| |.|+++.|.|+.+...++..|.+++.++.
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~---~-~~~i~~~~g~~~~~~~l~~~~~~g-d~V~~~~~~~~~~~~~~~~~g~~~~~~~~ 152 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFG---A-ERALLFSSGYAANLAVLTALAGKG-DLIVSDKLNHASLIDGARLSRARVRRYPH 152 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhC---C-CcEEEECcHHHHHHHHHHHhCCCC-CEEEEeCccCHHHHHHHHhcCCceEEeCC
Confidence 333444444444444444333 2 345555556667777778889999 99999999999999888999998888764
Q ss_pred cCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcc
Q 021547 165 LPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPM 239 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~ 239 (311)
.|++.+++.+++ ++.++++.+++|++|...+ +++|.++|++||+++|+||+|+...++ +......
T Consensus 153 -------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~ 222 (385)
T PRK05958 153 -------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE 222 (385)
T ss_pred -------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence 378888887764 2444555567899999887 999999999999999999999765443 3222221
Q ss_pred cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
..++..+++|++.|+||.|+.+| ||++++. ++++.+.... ..+..++++.++++.+.|+
T Consensus 223 ~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 223 AGLAGEPDVILVGTLGKALGSSG---AAVLGSE--------TLIDYLINRARPFIFTTALPPAQAAAARAALR 284 (385)
T ss_pred hCCCCCCceEEEEechhhcccCC---cEEEcCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHH
Confidence 22334557899999999998877 9987642 3555554321 1223355555555544443
No 114
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.92 E-value=1.4e-23 Score=193.29 Aligned_cols=237 Identities=15% Similarity=0.159 Sum_probs=176.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++++++|+.|++ +.++++|.+.+++.+.+... ....|....|..++++.+++++.+.+|. ++.+++++| +
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~ 103 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F 103 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence 5789999999863 35778899999999988632 2335777789999999999999987762 356777777 5
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNP 196 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~np 196 (311)
+++..++.+++++| |.|+++.|.|..+...+...|.+++.++ .+|.+++++.+++ +++++++.+++||
T Consensus 104 ~a~~~a~~~~~~~g-d~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~ 175 (385)
T TIGR01825 104 NTNQGVLSALLRKG-DIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSM 175 (385)
T ss_pred HHHHHHHHHhCCCC-CEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence 66778888889999 9999999999998888888888776653 3577777776543 6778888888999
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
||...+ +++|.++|++||+++|+||+|+.+.++ +........+. .+.+|++.|+||.|+++| ||++++.
T Consensus 176 tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~-- 246 (385)
T TIGR01825 176 DGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK-- 246 (385)
T ss_pred CCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH--
Confidence 999988 899999999999999999999876553 22111111122 346899999999998776 9988643
Q ss_pred CccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547 275 GVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~ 309 (311)
++++.+..... .+...++..|+++.+.|+
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 278 (385)
T TIGR01825 247 ------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVD 278 (385)
T ss_pred ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHH
Confidence 36666654321 223345666777666553
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=2e-23 Score=193.01 Aligned_cols=218 Identities=15% Similarity=0.075 Sum_probs=164.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++++|+|+.|++ +.+++++.+.+++.+.+..... ..|....|..++++++++++.+.+|. +++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence 5788999999873 3577899999999998865322 12333468889999999999887773 367888887 7
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPC 194 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~ 194 (311)
+++..++.+++++| |.|+++.|+|+.+...++..+.+++.++. .|++++++.+++ ++++++..+..
T Consensus 113 ~a~~~~~~~l~~~g-d~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 184 (397)
T PRK06939 113 DANGGLFETLLGKE-DAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVF 184 (397)
T ss_pred HHHHHHHHHhCCCC-CEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCc
Confidence 78888999999999 99999999999999899999988877653 377888776653 56677766678
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|++|...+ +++|.++|+++|++||+||+|....+ .+........+. ...+|+++|+||.++ |+|+||++++.
T Consensus 185 ~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~--g~r~G~v~~~~ 258 (397)
T PRK06939 185 SMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALG--GASGGYTAGRK 258 (397)
T ss_pred CCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhC--ccCceEEEeCH
Confidence 99998766 99999999999999999999963222 222111111221 234699999999973 56999999753
Q ss_pred CCCccchhhHHHHHhhh
Q 021547 273 PNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~ 289 (311)
++++.+...
T Consensus 259 --------~~~~~l~~~ 267 (397)
T PRK06939 259 --------EVIDWLRQR 267 (397)
T ss_pred --------HHHHHHHHh
Confidence 366776654
No 116
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=2.9e-23 Score=189.29 Aligned_cols=233 Identities=14% Similarity=0.133 Sum_probs=166.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMF----GLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~----g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++.++|+|+.|+| .+++.++.+++++.+.+.... ...|.... ...+++++++++++ .+++++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 5889999999964 245677999999999886411 11222222 34557777777773 24567777
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeC
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIIN 192 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~ 192 (311)
+|+ +++..++.+++++| |+|+++.|+|..+...++..|.+++.++. +|.+.+++.++. +++++++.+
T Consensus 84 ~G~-~~~~~~l~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~ 154 (360)
T TIGR00858 84 SGY-LANVGVISALVGKG-DLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDG 154 (360)
T ss_pred chH-HHHHHHHHHhCCCC-CEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeC
Confidence 775 55556778888999 99999999999999999999998887753 478888887754 467778888
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
++||+|...+ +++|.++|+++|++||+||+|....++.. +......+..++++|+++|+||.|+++| ||+++
T Consensus 155 ~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~ 228 (360)
T TIGR00858 155 VFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAG 228 (360)
T ss_pred CccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEc
Confidence 8999999888 89999999999999999999986555432 2222222334567899999999998877 99887
Q ss_pred eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l 308 (311)
+. ++++.++.... .....++..++++.+.+
T Consensus 229 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 261 (360)
T TIGR00858 229 SQ--------ALIDYLINRARTLIFSTALPPAVAAAALAAL 261 (360)
T ss_pred CH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHH
Confidence 43 36666654321 12234455444544444
No 117
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=8.4e-24 Score=191.41 Aligned_cols=221 Identities=13% Similarity=0.077 Sum_probs=163.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
+++++.+++++.+..... ..|.+..+..++++.++++++ ++++++++|+++++..++.+++++| |+|++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~~~g-d~v~~ 76 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHTQPG-GSVIC 76 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhcCCC-CeEEE
Confidence 568899999998865432 257666677888888888873 4578888888999999999999999 99999
Q ss_pred cCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547 141 PRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIVIINPCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 141 ~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~ 210 (311)
+.|+|..+.. .....|.+++.++.. .+.+|++.+++++++ +++++++++|+|| |..++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999976432 355689999988753 357899999998864 6889999999997 6677999999999
Q ss_pred HHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547 211 ETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 288 (311)
++|+++|+++|+|++|.... ..+. .+..+....+ +++.|+||+|+++| |++++.++ +++++++.
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~-------~~~~~~~~ 218 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGV---ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR-------DFIARARR 218 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCC---CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH-------HHHHHHHH
Confidence 99999999999999986432 1122 2222211223 56889999999887 66554433 36666665
Q ss_pred hhc---cccCCCchhHHHHHhhhhc
Q 021547 289 CLG---VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 289 ~~~---~~~~~~~~~q~~~~~~l~~ 310 (311)
... .....+++.|+++...|++
T Consensus 219 ~~~~~~~~~~~~~~~~~a~~~~L~~ 243 (338)
T cd06502 219 RRKQAGGGMRQSGFLAAAGLAALEN 243 (338)
T ss_pred HHHHhCCChhhHHHHHHHHHHHhcC
Confidence 431 2334567778887777654
No 118
>PRK07049 methionine gamma-lyase; Validated
Probab=99.92 E-value=3.6e-23 Score=192.07 Aligned_cols=197 Identities=15% Similarity=0.147 Sum_probs=152.5
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcC
Q 021547 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNH 156 (311)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g 156 (311)
.+|+. +....|++.++++.. .+++++++||++++..++.+++++| |.|+++.|.|..+...+ +..|
T Consensus 78 ~R~~~-Pt~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~G-d~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 78 SRFNH-PNSEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPG-DVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred cCCCC-cCHHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCC-CEEEEcCCCcccHHHHHHHHHHhcC
Confidence 44554 456899999999883 4578999999999999999999999 99999999999986653 5678
Q ss_pred cEEEEeeccCCCCcccCHHHHHhhcC-----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH---hCCEEEEeccccC
Q 021547 157 IEVRHFDLLPERGWEVDLEAVEALAD-----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK---LGILVIADEVYGH 228 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~---~~~~li~D~ay~~ 228 (311)
++++.++. ..|.+.+++.+. ++++++++++|+||||.+++.+++.+|++.|.. +++++|+|++|..
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 88766642 146666765542 578999999999999999998888888887654 6899999999875
Q ss_pred CccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHh
Q 021547 229 LAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMF 306 (311)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~ 306 (311)
..+. .++. .++.|+++|+||.|+ .+|+|+||++++. ++++.++.... .+.+.+++.|+++.+
T Consensus 222 ~~~~----~pl~----~g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 222 PVFQ----KPLE----HGADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred cccC----Cccc----cCCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 4321 1221 124589999999999 5999999998642 36777766643 456789999999887
Q ss_pred hhh
Q 021547 307 LLV 309 (311)
Q Consensus 307 ~l~ 309 (311)
.|+
T Consensus 286 ~L~ 288 (427)
T PRK07049 286 SLE 288 (427)
T ss_pred CCC
Confidence 765
No 119
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=1.1e-22 Score=184.05 Aligned_cols=213 Identities=16% Similarity=0.168 Sum_probs=157.4
Q ss_pred CCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547 59 PCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN 137 (311)
Q Consensus 59 ~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~ 137 (311)
.++..+|.++++..+.++. |. ...-..++++.+++++ | ++++++++++|+++++..++.+++++| |.
T Consensus 30 lgl~~~~~~~~~~~~~~~~-----~~g~~~~~~~Le~~lA~~~----g--~~~e~ilv~~gg~~a~~~~~~al~~~g-d~ 97 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLET-----YVGPAIFEEKVQELGREHL----G--GPEEKILVFNRTSSAILATILALEPPG-RK 97 (346)
T ss_pred ccCCCChhHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHc----C--CCcceEEEECCHHHHHHHHHHHhCCCC-CE
Confidence 3456678888888888762 31 1223445555666555 3 467899999999999999999999999 99
Q ss_pred EEec---CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 138 ILLP---RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 138 Vl~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
|+++ .|.|..|...++..|.++..+ .+++.++. .+++++++++ +++++|.+++.+++++|+++|+
T Consensus 98 Vli~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~ 165 (346)
T TIGR03576 98 VVHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAK 165 (346)
T ss_pred EEECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHH
Confidence 9974 579999999999999876432 14454433 2456777764 5789999999999999999999
Q ss_pred HhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-
Q 021547 215 KLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG- 291 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~- 291 (311)
++|+++++||+|+.+..+ +.. +...+. ..+++.|+|| +++|+|+||++++. ++++.++....
T Consensus 166 ~~~~~livDEAy~~~~~~~~~~~--~~~~~~---~divv~s~SK--alaG~r~G~v~~~~--------~li~~l~~~~~~ 230 (346)
T TIGR03576 166 SKEAIVLVDDASGARVRRLYGQP--PALDLG---ADLVVTSTDK--LMDGPRGGLLAGRK--------ELVDKIKSVGEQ 230 (346)
T ss_pred HcCCEEEEECCccccccccCCCC--CHHHcC---CcEEEeccch--hccccceEEEEeCH--------HHHHHHHHhhcC
Confidence 999999999999976432 221 111221 2277889999 47899999999853 47888887744
Q ss_pred cccCCCchhHHHHHhhhhc
Q 021547 292 VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 292 ~~~~~~~~~q~~~~~~l~~ 310 (311)
...+.+++.|+++.+.|+.
T Consensus 231 ~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred cccCccHHHHHHHHHHHhh
Confidence 3345688899998888753
No 120
>PLN02822 serine palmitoyltransferase
Probab=99.91 E-value=2.5e-23 Score=195.88 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=173.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++++++||+.+++ +++..+|.+++++.++++.... ..|.+..+..+|++++++++. .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4788999999974 4567799999999999875211 135566678999999999995 34678888
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCc-cEEEEeCC
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENT-AAIVIINP 193 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~-~~i~i~~p 193 (311)
+|.+ ++..++.+++++| |.|++....|..+...+...+.+++.++..+.+++..+++.+++.. .+++ +++++..+
T Consensus 177 ~G~~-a~~sai~a~~~~g-d~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i 254 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKG-DIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAI 254 (481)
T ss_pred CHHH-HHHHHHHHhCCCC-CEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecC
Confidence 8777 6788999999999 9999998888888788888999999887643222333333333221 1234 57777788
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc--CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF--GSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~--~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
++++|.+.+ +++|.++|++||+++|+||+|+...++.........+ ......|++.||||.|+++| ||++++
T Consensus 255 ~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~ 328 (481)
T PLN02822 255 YQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS 328 (481)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC
Confidence 899999999 8999999999999999999999766652211111122 11245699999999999999 999875
Q ss_pred CCCCccchhhHHHHHhhh-hcccc--CCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKAC-LGVRS--GPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~q~~~~~~l~ 309 (311)
. ++++.++.. ....+ +.+++.|+++.+.|+
T Consensus 329 ~--------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~ 361 (481)
T PLN02822 329 A--------RVVDHQRLSSSGYVFSASLPPYLASAAITAID 361 (481)
T ss_pred H--------HHHHHHHhcCCceeeccccCHHHHHHHHHHHH
Confidence 3 367766643 22233 334666777665553
No 121
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.91 E-value=2.9e-22 Score=185.68 Aligned_cols=203 Identities=18% Similarity=0.144 Sum_probs=156.1
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAP------MFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++.+.|+++.- .+.++.+.+++.+.+...... .... ...+.++|+.++++++. .++++|++|
T Consensus 18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~i~~~ 87 (401)
T PRK10874 18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA-----PDAKNIVWT 87 (401)
T ss_pred CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC-----CCCCEEEEE
Confidence 45789999873 356788999998887532110 0000 11256788888888732 167899999
Q ss_pred CChHHHHHHHHHHHh----cCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547 117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i 188 (311)
+|+++++..++.++. ++| |+|+++++.|++ +...++..|.+++.++.. .++.+|++++++.++++++++
T Consensus 88 ~~~t~~i~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 88 RGTTESINLVAQSYARPRLQPG-DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred CCHHHHHHHHHHHhhhccCCCc-CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcCcCcEEE
Confidence 999999999999983 689 999999999864 456678899999999874 356789999999999999999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
++++|+||||..++ +++|+++|+++|+++|+|++|+...+ ...+..+ +..+++.|++|.||.+| +||+
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQAL---DIDFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhc---CCCEEEEecccccCCCc--cEEE
Confidence 99999999999998 88999999999999999999974222 1222222 23488899999887777 5888
Q ss_pred EeeC
Q 021547 269 ATND 272 (311)
Q Consensus 269 ~~~~ 272 (311)
+++.
T Consensus 233 ~~~~ 236 (401)
T PRK10874 233 YGKS 236 (401)
T ss_pred EEch
Confidence 7653
No 122
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=2.6e-22 Score=185.80 Aligned_cols=203 Identities=18% Similarity=0.147 Sum_probs=156.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++++.|+++.- .+.|+.+.+++.+.+..... ..+... ..+.++|+.++++++. .++++|++|
T Consensus 15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~i~~t 84 (398)
T TIGR03392 15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA-----PDAENIVWT 84 (398)
T ss_pred CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC-----CCCCeEEEe
Confidence 36899999873 35678899999888752211 112221 1245688889988843 146799999
Q ss_pred CChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547 117 LGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188 (311)
Q Consensus 117 ~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i 188 (311)
+|++++++.++.++ .++| |+|+++.|.|++ +...++..|.+++.++.. .++.+|++.+++.++++++++
T Consensus 85 ~g~t~~l~~~~~~~~~~~~~~g-d~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 85 RGTTESINLVAQSYARPRLQPG-DEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred CChHHHHHHHHHHhhhccCCCC-CEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhccCceEE
Confidence 99999999999998 3689 999999999865 456678899999999874 335689999999999999999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
++++|+||||.+++ +++|+++|+++|+++++|++|+...+ ...+..++ ..+++.|++|.++.+| +||+
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALD---IDFYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcC---CCEEEEecccccCCCc--eEEE
Confidence 99999999999998 88899999999999999999975322 12222222 2378889999887666 8999
Q ss_pred EeeC
Q 021547 269 ATND 272 (311)
Q Consensus 269 ~~~~ 272 (311)
+++.
T Consensus 230 ~~~~ 233 (398)
T TIGR03392 230 YGKT 233 (398)
T ss_pred EEcH
Confidence 8753
No 123
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=188.12 Aligned_cols=245 Identities=17% Similarity=0.160 Sum_probs=175.2
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++..+|||..|.+... ++ .+|.+.+++.+.+..... ....+..++++.+++++.+..+ .+++++|+|+++
T Consensus 37 dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHH
Confidence 5788999998854422 33 368999999998864311 1112335788888888887543 379999999999
Q ss_pred HHHHHHHHHhcCCC------CEEEecCCCCcchHHHHHHcCcEE-EEeeccC-CCCc----ccCHHHHHhhcCCCccEEE
Q 021547 122 AVEIILTVITRLGA------ANILLPRPGWPFYESFAKRNHIEV-RHFDLLP-ERGW----EVDLEAVEALADENTAAIV 189 (311)
Q Consensus 122 a~~~~~~~l~~~g~------d~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~i~ 189 (311)
|+.++++.+...+. ++|++..+.|.++.......+... ......+ ..++ ..|++.+++.+.+++++++
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi 187 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM 187 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence 99999998765331 579999999987765444433221 1111111 0111 1288999999988899999
Q ss_pred EeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 190 IINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 190 i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
+..++||+| ..++++.+++|.++|++||+++|+||+|.++.+.|. +..+......+++ .+|||.++ +|+|+||+
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~~~pdi---~t~sK~~~-~G~rig~~ 262 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGIEPDI---MTLAKGLG-GGVPIGAV 262 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence 998899999 688999999999999999999999999998866653 2222223222333 37999988 89999999
Q ss_pred EeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 269 ATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9853 366766543 33467889999999988875
No 124
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=1.4e-22 Score=186.96 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=149.3
Q ss_pred CC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcC
Q 021547 83 YA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNH 156 (311)
Q Consensus 83 Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g 156 (311)
|. +.++..+|+++++++++ .+++++++|+++|+..++.+++++| |+|+++.|.|..+.. .++..|
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~G-d~Vl~~~~~y~~~~~~~~~~~~~~G 128 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAG-DHVVASDTLYGCTFALLNHGLTRYG 128 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCC-CEEEEecCccchHHHHHHHHHhhCC
Confidence 55 55688999999999994 3468899999999999999999999 999999999976543 457789
Q ss_pred cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCC
Q 021547 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGST 234 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~ 234 (311)
++++.++.. |++++++.++++++++++++|+||||.+.+ +++|.++|+++ |+++|+|++|+...+. .
T Consensus 129 ~~v~~vd~~-------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~-~ 197 (400)
T PRK06234 129 VEVTFVDTS-------NLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ-R 197 (400)
T ss_pred eEEEEECCC-------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC-C
Confidence 999888642 789999999889999999999999999998 89999999997 9999999999875432 1
Q ss_pred CCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhh--h-ccccCCCchhHHHHHhhh
Q 021547 235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKAC--L-GVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~q~~~~~~l 308 (311)
++. . +..|+++|+||.++++|+++ ||++++. +++++++.. . ..+...+++..+.+.+-|
T Consensus 198 ---~l~-~---g~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 198 ---PLQ-L---GADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred ---chh-h---CCcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 221 1 23499999999999999876 8888753 356665532 1 223455666655555444
No 125
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=3.3e-22 Score=182.74 Aligned_cols=201 Identities=16% Similarity=0.147 Sum_probs=155.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC
Q 021547 61 FRTAAVAEDAIVDSVRSSMFN-------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL 133 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~ 133 (311)
-+..+++.+++.+........ .+...+-+.++++.++++++ + +++++|+|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 467788999988876421110 11112345788888888883 2 78999999999999999999999
Q ss_pred CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CCccEEEEeCCCCCCccCCCHHHH
Q 021547 134 GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------ENTAAIVIINPCNPCGNVLTYQHL 206 (311)
Q Consensus 134 g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p~nptG~~~~~~~l 206 (311)
| |+|+++.+.|......++..|++++.++.+...++.+|++.+++.++ ++++++++++|+||||...+ +
T Consensus 83 g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~ 158 (361)
T cd06452 83 G-DWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A 158 (361)
T ss_pred C-CEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence 9 99999999988777788999999999987654456899999998775 36889999999999999877 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH
Q 021547 207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286 (311)
Q Consensus 207 ~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~ 286 (311)
++|.++|+++|+++|+|++|+.... + .....+ +..++++|+||++++ +.|+||++++. ++++++
T Consensus 159 ~~i~~~~~~~~~~vivD~a~~~g~~---~-~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~~--------~~~~~l 222 (361)
T cd06452 159 KKIAKVCHEYGVPLLLNGAYTVGRM---P-VSGKEL---GADFIVGSGHKSMAA-SAPIGVLATTE--------EWADIV 222 (361)
T ss_pred HHHHHHHHHcCCeEEEECCcccCCc---C-CCHHHc---CCCEEEecCCccccC-CCCeEEEEECH--------HHHHHH
Confidence 8999999999999999999985211 1 122222 234999999999874 55999999853 366666
Q ss_pred hhh
Q 021547 287 KAC 289 (311)
Q Consensus 287 ~~~ 289 (311)
...
T Consensus 223 ~~~ 225 (361)
T cd06452 223 FRT 225 (361)
T ss_pred hcc
Confidence 543
No 126
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.3e-23 Score=174.06 Aligned_cols=230 Identities=21% Similarity=0.298 Sum_probs=173.9
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
|++++.++..+... +|.|.+ .+. .. .|.+. -..+++.+++.- -+.++++++++.|+-+.+
T Consensus 40 G~~iv~ld~~e~~r---yPdP~q-~ef--------k~-~~~d~-rnk~ls~a~~~d------kpLt~dnic~GvGsDE~I 99 (375)
T KOG0633|consen 40 GRDIVKLDANENPR---YPDPEQ-MEF--------KY-VYPDP-RNKRLSDALAQD------KPLTSDNICVGVGSDELI 99 (375)
T ss_pred CCCceEeccccCCC---CcCHHH-ccc--------cc-ccCCc-ccchhhhhcccC------CCCCccceEEecCcHHHH
Confidence 67888888776432 344433 111 11 23332 224445444432 378999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCccCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~ 201 (311)
.+++++.|.||+++|+...|+|.-|...+...+++++.+|+.+ +|.++.|.+.+.++ ..+|.+|+++|+||||..+
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i 177 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII 177 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence 9999999999999999999999999888899999999999865 78899999988765 3789999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
..+++.++.+.-. |.++++||+|-.|.-. ...+....+.+|++++.+|||.||++|+|+||..++-+
T Consensus 178 k~~di~KiLe~p~--nglVVvDEAYidFsg~---~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~-------- 244 (375)
T KOG0633|consen 178 KEDDILKILEMPD--NGLVVVDEAYIDFSGV---ESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLS-------- 244 (375)
T ss_pred cHHHHHHHHhCCC--CcEEEEeeeeEeeccc---cccchHhHhCCceeehhhhhhhcCcceeEeecccccHH--------
Confidence 9888888887444 8999999999987632 12333345677999999999999999999999988643
Q ss_pred HHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 282 IVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++..+.+... ..+.|.....++.++|+
T Consensus 245 ia~iln~~Ka-PYNiS~~~s~~AL~Als 271 (375)
T KOG0633|consen 245 IAEILNRAKA-PYNISVAGSVAALAALS 271 (375)
T ss_pred HHHHHHhccC-CccccchhHHHHHHhcC
Confidence 5555655555 23455555555555554
No 127
>PLN02242 methionine gamma-lyase
Probab=99.90 E-value=2.1e-22 Score=186.33 Aligned_cols=187 Identities=18% Similarity=0.188 Sum_probs=145.5
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH-----HHcCcEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA-----KRNHIEVR 160 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~-----~~~g~~~~ 160 (311)
.+...+|++.+++++ ..+.+++++|+++|+..++.+++++| |+|+++.|.|..+...+ +..|.+++
T Consensus 75 ~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~G-D~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 75 NPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSG-GHVVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred ChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCC-CEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 456788999999988 34578899999999999999999999 99999999998876654 34677777
Q ss_pred EeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547 161 HFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM 239 (311)
Q Consensus 161 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~ 239 (311)
.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+.. .
T Consensus 146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~---~-- 210 (418)
T PLN02242 146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP---A-- 210 (418)
T ss_pred EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH---H--
Confidence 6654 288999999988 5999999999999999987 9999999999999999999998655421 1
Q ss_pred cccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l 308 (311)
.+ +..|+++|+||.++++|.++ ||++++. ++++.++.... ...+++...|.+...++
T Consensus 211 -~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~ 271 (418)
T PLN02242 211 -RL---GADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSE 271 (418)
T ss_pred -Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHc
Confidence 11 24599999999999999885 8887643 36666665522 12344555566655443
No 128
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.90 E-value=2.6e-22 Score=184.56 Aligned_cols=243 Identities=16% Similarity=0.149 Sum_probs=167.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
++.++|||..|.+..+.+ ..+|.+.+++.+.+.... ...|. . +.++.+++.+.+.+| .+++++++|++
T Consensus 25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~-~----~~~~~l~~~la~~~g----~~~~~~~~sg~ 94 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYY-T----EPQEELAEKLVEHSG----ADRVFFCNSGA 94 (379)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccC-C----HHHHHHHHHHHhhCC----CCEEEEeCCcH
Confidence 578899999873322222 356899999998886432 11232 2 334444444444443 24899999999
Q ss_pred HHHHHHHHHHh---c----CCCCEEEecCCCCcchHHHHHHcCcEEEE----eeccCCCCcc--cCHHHHHhhcCCCccE
Q 021547 121 EAVEIILTVIT---R----LGAANILLPRPGWPFYESFAKRNHIEVRH----FDLLPERGWE--VDLEAVEALADENTAA 187 (311)
Q Consensus 121 ~a~~~~~~~l~---~----~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~--~d~~~l~~~l~~~~~~ 187 (311)
+++..+++.+. . ++ |+|+++.|+|..+...+...+..... .++..+..+. .|++.+++.+++++++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~-~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 173 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEK-KKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAA 173 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCC-CeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeE
Confidence 99999888663 2 36 99999999998877666555543221 1211111111 1789999988888889
Q ss_pred EEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547 188 IVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 188 i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
++++.++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+.. .++.......+++ ++||.++ +|+|+|
T Consensus 174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG 248 (379)
T TIGR00707 174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIG 248 (379)
T ss_pred EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccE
Confidence 8887667778864 68999999999999999999999999987665532 2222222223333 7899998 999999
Q ss_pred EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|++++. ++++.+... .....+.++++|+++.+.|+
T Consensus 249 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~ 284 (379)
T TIGR00707 249 ATLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLE 284 (379)
T ss_pred EEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999853 377777654 33456789999999987764
No 129
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=1e-21 Score=179.95 Aligned_cols=201 Identities=15% Similarity=0.126 Sum_probs=150.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC-------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCC
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAP-------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG 134 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g 134 (311)
.+...+.+++.+...+....++.. ..-+.++++.++++++ .+.+++++|+++++..++.+++++|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALCKEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhhCCC
Confidence 456677777776643211111111 1134677888888883 3467889999999999999999999
Q ss_pred CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEEEeCCCCCCccCCCHHHHH
Q 021547 135 AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 135 ~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
|.|+++.+.|.+....++..|.+++.++...+.++.+|+++|++.+++ +++++++++|+||+|...+ ++
T Consensus 91 -d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~ 166 (370)
T TIGR02539 91 -DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AG 166 (370)
T ss_pred -CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HH
Confidence 999999888766667889999999999875445678999999998752 6789999999999999888 88
Q ss_pred HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK 287 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~ 287 (311)
+|.++|+++|+++|+|++|+.... ....... +..++++|+||+|+ +|.|+||++++. ++++.++
T Consensus 167 ~i~~la~~~~~~livDea~~~g~~----~~~~~~~---~~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~ 230 (370)
T TIGR02539 167 KVAKVCREKGVPLLLNCAYTVGRM----PVSAKEI---GADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVL 230 (370)
T ss_pred HHHHHHHHcCCeEEEECccccCCc----CCCHHHc---CCCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhc
Confidence 999999999999999999996321 1111111 23477899999987 577899999853 3666666
Q ss_pred hhh
Q 021547 288 ACL 290 (311)
Q Consensus 288 ~~~ 290 (311)
...
T Consensus 231 ~~~ 233 (370)
T TIGR02539 231 RKS 233 (370)
T ss_pred ccc
Confidence 543
No 130
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=6.5e-22 Score=183.77 Aligned_cols=233 Identities=16% Similarity=0.163 Sum_probs=161.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
+++.++|+..+ |..+..+|.+++++.+.+..... ..|.......+|++.+++++. .++.+++++
T Consensus 45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS 114 (410)
T ss_pred CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence 46689999987 34678899999999988764221 123332246788888888883 234566666
Q ss_pred ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc----CCCccEEEEe
Q 021547 118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA----DENTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l----~~~~~~i~i~ 191 (311)
| ++++..++..+.. +| +.|+++...|..+...++..|.++..++. + |.+.+++.+ .+++++++++
T Consensus 115 G-~~a~~~~i~~l~~~~~g-~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~ 185 (410)
T PRK13392 115 G-YVSNDAALSTLGKLLPG-CVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFE 185 (410)
T ss_pred H-HHHHHHHHHHHhcCCCC-CEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEe
Confidence 5 6778777877754 78 98888888888877788888988776642 1 333444433 3578899999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+|+||||.+++ +++|.++|+++|+++|+||+|....++............ +...++++|+||.|+++| ||+++
T Consensus 186 ~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~ 259 (410)
T PRK13392 186 SVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAA 259 (410)
T ss_pred CCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhc
Confidence 99999999998 999999999999999999999944443211111111111 112388999999999998 99876
Q ss_pred eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++.++.+.. ++...++++|+++.+.|+
T Consensus 260 ~~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~ 293 (410)
T PRK13392 260 SA--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIR 293 (410)
T ss_pred CH--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHH
Confidence 42 36776665532 234456677887777664
No 131
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=1.2e-21 Score=180.28 Aligned_cols=186 Identities=18% Similarity=0.195 Sum_probs=142.5
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~ 162 (311)
+...++++.+++++ ..+++++++|+++|+..++.+++++| |+|+++.+.|.+.. ..++..|++++.+
T Consensus 61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~G-d~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v 131 (390)
T PRK08133 61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAG-DHVVSSRSLFGSTVSLFEKIFARFGIETTFV 131 (390)
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCC-CEEEEccCcchhHHHHHHHHHHHcCcEEEEE
Confidence 34678889999888 33578999999999999999999999 99999999987643 3566789999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++.+++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|....+. .++. +
T Consensus 132 d~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl~-~ 196 (390)
T PRK08133 132 DLT-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPLK-L 196 (390)
T ss_pred CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchh-h
Confidence 752 789999999999999999999999999998 899999999999999999999754321 1121 1
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHh
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMF 306 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~ 306 (311)
+..+++.|+||.++.+|.++|++++.++ ++++++... .......+++.++.+.+
T Consensus 197 ---g~Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~~l~ 251 (390)
T PRK08133 197 ---GADVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWVFLK 251 (390)
T ss_pred ---CCcEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHHHHc
Confidence 1238899999999999999965554433 245555544 22334455555555433
No 132
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.89 E-value=8.3e-22 Score=181.88 Aligned_cols=247 Identities=17% Similarity=0.137 Sum_probs=169.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-..+.+. .+|.+.+++.+++..... ... ....+....+++.+.+.. ..+++++++|+++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGse 99 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAE 99 (389)
T ss_pred CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence 35888999988632222334 688999999999864211 111 112233444555554422 2468999999999
Q ss_pred HHHHHHHHHh----cCC---CCEEEecCCCCcchHHHHHHcCcEEEEeec-cC-CCCcc----cCHHHHHhhcCCCccEE
Q 021547 122 AVEIILTVIT----RLG---AANILLPRPGWPFYESFAKRNHIEVRHFDL-LP-ERGWE----VDLEAVEALADENTAAI 188 (311)
Q Consensus 122 a~~~~~~~l~----~~g---~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~l~~~~~~i 188 (311)
|++.+++++. .+| .++|++.++.|+++...+...+......+. .+ ..++. .|++.+++.++++++++
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av 179 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI 179 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence 9999988873 455 138999999999886655554433222110 00 11111 48899999998888899
Q ss_pred EEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 189 VIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 189 ~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
++..++||+| ..++.+.+++|.++|++||+++|+||+|.++.+.|..+ ....+.-.++ +.++||.++ +|+|+||
T Consensus 180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~ 254 (389)
T PRK01278 180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGA 254 (389)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEE
Confidence 9888788998 78899999999999999999999999999876665422 2222222222 348999986 8999999
Q ss_pred EEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 268 LATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++++ ++++.+... ...+++.++++|+++.+.|+
T Consensus 255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 289 (389)
T PRK01278 255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLD 289 (389)
T ss_pred EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 99864 356666544 33456789999999866654
No 133
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=1.7e-21 Score=177.08 Aligned_cols=229 Identities=14% Similarity=0.131 Sum_probs=159.0
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.+++|+..+ |.+.+.+|++.+++++.+..... ..|.. .....++++.+++++ |. ++.++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~----~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----GK----EAALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----CC----CCEEEeccH
Confidence 578898887 34677789999999999874221 11222 223356666666665 31 245666666
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----CccEEEEeCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-----NTAAIVIINPC 194 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~ 194 (311)
++++.+++.+++++| |+|+++.|.|.++...++..|.+++.++. +|.+++++.+++ +++++++++++
T Consensus 71 ~~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~ 142 (349)
T cd06454 71 YAANDGVLSTLAGKG-DLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVY 142 (349)
T ss_pred HHHHHHHHHHhcCCC-CEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccc
Confidence 788888888999999 99999999999988888999999887752 366777777653 46777888999
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
||||...+ +++|.++|+++|+++|+|++|+...+. +... ........+++++++|+||.++.+| ||++.++
T Consensus 143 ~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~ 215 (349)
T cd06454 143 SMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK 215 (349)
T ss_pred cCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccC---CEEECCH
Confidence 99999987 899999999999999999999743222 1111 1111123456799999999988766 9988643
Q ss_pred CCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547 273 PNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l 308 (311)
++++.++.... .+...++..++++.+.|
T Consensus 216 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 246 (349)
T cd06454 216 --------ELIDYLRSYARGFIFSTSLPPAVAAAALAAL 246 (349)
T ss_pred --------HHHHHHHHhchhhhccCCCCHHHHHHHHHHH
Confidence 35555544321 12345555555555544
No 134
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.89 E-value=3.1e-21 Score=178.92 Aligned_cols=204 Identities=20% Similarity=0.248 Sum_probs=157.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC----CC----CCCCcHHHHHHHHHHHhhcCCCCCC-CCCE
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC----YA----PMFGLPLARRAVAEYLNRDLPYKLS-ADDI 113 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~----~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v 113 (311)
.+.+++.|+++.. .++++.+.+++.+.+....... +. ....+.++|+.++++++. + +++|
T Consensus 15 ~~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~------~~~~~v 83 (403)
T TIGR01979 15 NGKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINA------ASDEEI 83 (403)
T ss_pred CCCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc------CCCCeE
Confidence 3668899999983 2567888899887765321100 10 012456888999998843 4 5789
Q ss_pred EEeCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547 114 YITLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT 185 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 185 (311)
++|+|+++++.+++.++ .++| |+|+++.+.|++. ...++..|.+++.++.. .++.++++.+++.+++++
T Consensus 84 ~~~~g~t~~l~~~~~~~~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 84 VFTRGTTESINLVAYSWGDSNLKAG-DEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKT 160 (403)
T ss_pred EEeCCHHHHHHHHHHHhhhhcCCCC-CEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCC
Confidence 99999999999998876 4689 9999999988753 45667889999999865 446789999999999999
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
+++++++++||||..++ +++|.++|+++|+++|+|++|+... .+..+.. .+..+++.|++|.+|.+| +
T Consensus 161 ~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~---~~~d~~~~s~~K~~gp~G--~ 228 (403)
T TIGR01979 161 KLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQA---LDCDFYVFSGHKMYGPTG--I 228 (403)
T ss_pred eEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccc---cCCCEEEEecccccCCCC--c
Confidence 99999999999999999 8899999999999999999997522 2222222 234589999999887666 8
Q ss_pred eEEEeeC
Q 021547 266 GWLATND 272 (311)
Q Consensus 266 G~i~~~~ 272 (311)
|+++++.
T Consensus 229 g~l~~~~ 235 (403)
T TIGR01979 229 GVLYGKE 235 (403)
T ss_pred eEEEEch
Confidence 8888753
No 135
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=4.1e-22 Score=184.43 Aligned_cols=240 Identities=18% Similarity=0.126 Sum_probs=168.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
++++++||..|.+....+ +.+|.+.+++.++++... ...|..+.+ . .+++++.+.++.. ..+++++++|++
T Consensus 41 dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~----~la~~l~~~~~~~-~~~~v~~~~sgs 113 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEPQ-I----ALAERLVELLGAP-EGGRVFFCNSGA 113 (398)
T ss_pred CCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHHH-H----HHHHHHHHhCCCC-CCCEEEEeCchH
Confidence 578899999874432212 247999999999887422 224554322 3 4444444444422 347899999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcE------------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIE------------VRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+++..+++.+..+|.+.|+...++|+++...+.. .+.. +..++. .|++.+++.+.+++++
T Consensus 114 ea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~a 186 (398)
T PRK03244 114 EANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAA 186 (398)
T ss_pred HHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEE
Confidence 9999999987777656788888888876443332 2211 111211 3788999988778889
Q ss_pred EEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547 188 IVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
++++.++||+|.++++++ +++|.++|++||+++|+||+|.++.+.|..+ .+......+++ .+|||.++ +|+|+|
T Consensus 187 viiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig 261 (398)
T PRK03244 187 VFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIG 261 (398)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccE
Confidence 999888999999987665 9999999999999999999998876655422 22222222333 38899987 899999
Q ss_pred EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 262 ~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 297 (398)
T PRK03244 262 ACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLD 297 (398)
T ss_pred EEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence 999864 366666543 33467889999999998865
No 136
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.89 E-value=1.7e-21 Score=180.82 Aligned_cols=203 Identities=20% Similarity=0.209 Sum_probs=155.7
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--------MFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.+++.|+.+. ..+.++.+.+++.+.+.....+.... .....++|+.++++++. .++++|++|
T Consensus 22 ~~~iYld~a~-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAA-----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCcc-----cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 4689999987 24678889999988875321111110 11245788888888842 156799999
Q ss_pred CChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547 117 LGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188 (311)
Q Consensus 117 ~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i 188 (311)
+|+++++..++.++ +++| |+|+++.+.|++ +...++..|++++.++.. .++.+|+++|++.++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv 168 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAG-DNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDERTRLL 168 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCc-CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCCCcEEE
Confidence 99999999998874 5789 999999988864 455677889999999874 345689999999999899999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
++++|+||||.++| +++|.++|+++|+++++|++|+... ....+... +..+++.|++|.+|.+| +||+
T Consensus 169 ~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l 236 (406)
T PRK09295 169 AITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGIL 236 (406)
T ss_pred EEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhc---CCCEEEeehhhccCCCC--cEEE
Confidence 99999999999999 8889999999999999999997532 22233322 23488999999877666 7998
Q ss_pred EeeC
Q 021547 269 ATND 272 (311)
Q Consensus 269 ~~~~ 272 (311)
+++.
T Consensus 237 ~~~~ 240 (406)
T PRK09295 237 YVKE 240 (406)
T ss_pred EEch
Confidence 8754
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=2.9e-21 Score=179.23 Aligned_cols=204 Identities=13% Similarity=0.121 Sum_probs=154.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---M--FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~--~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.+..+++|+..+ |..+..+|.+++++.+++..- . ...+. ......+|++.+++++. .+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEE
Confidence 467889999988 457888999999999998631 1 11121 12245678888888872 3567889
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN 195 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n 195 (311)
+|+++|+..++.++..+| |.|++..+.|..+...++..|.+++.++. .|++.+++.+++ +++++++.+++|
T Consensus 121 ~sG~~An~~~l~~l~~~g-~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n 192 (407)
T PRK07179 121 QSGWAANVGLLQTIADPN-TPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYS 192 (407)
T ss_pred CCHHHHHHHHHHHhCCCC-CEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCC
Confidence 999999999999999999 99999999998888888888888766542 488999998865 477888889999
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCCCCcceeeEEEee
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|||.+.+ +++|.++|+++|+++|+||+|....++......+..++... ..+++.|+||.++ .|+||++++
T Consensus 193 ~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~ 263 (407)
T PRK07179 193 TTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP 263 (407)
T ss_pred CCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC
Confidence 9999999 88999999999999999999985433211111122222112 2488999999975 368999875
No 138
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=2e-21 Score=178.08 Aligned_cols=194 Identities=19% Similarity=0.205 Sum_probs=147.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHc
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRN 155 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~ 155 (311)
+.+|+. +...+|+++++++.+ .+++++++|+++++.+++.+++++| |+|+++.|+|..+...+ ...
T Consensus 45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~G-D~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPD-DLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCC-CEEEEcCCCcHHHHHHHHHHHhhc
Confidence 445544 457889999999883 4689999999999999999999999 99999999998644332 333
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
+.++..++. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 115 ~~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~--- 181 (382)
T TIGR02080 115 CFRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ--- 181 (382)
T ss_pred CeEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 455554431 3789999999889999999999999999999 888999999999999999999864321
Q ss_pred CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.++. +. ..++++|+||.++. +|++.|++++.++ +++++++.... .+.+.+++.++.+.+-+
T Consensus 182 -~pl~-~g---aDivv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~lr~l 244 (382)
T TIGR02080 182 -NPLA-LG---ADLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLTLRGL 244 (382)
T ss_pred -Cchh-hC---CCEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHHHccc
Confidence 1221 11 23899999999864 6789999887654 36677766543 35677888777665443
No 139
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.89 E-value=3.9e-21 Score=177.13 Aligned_cols=205 Identities=18% Similarity=0.113 Sum_probs=157.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
....||++--. . .-|+++++.+++.+....... ..+.....+.++|+.++++++ .++++++
T Consensus 17 ~~~~~~~~~~~---~-~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~ 84 (387)
T PRK09331 17 EEEFINLDPIQ---R-GGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT 84 (387)
T ss_pred cccccccChhh---c-CCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence 35667776332 1 246788999999988743111 111223357889999999983 3568899
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEE
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIV 189 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~ 189 (311)
+|+++++.+++.+++++| |+|+++.++|......++..|++++.++...+.++.+|++.+++.+++ ++++++
T Consensus 85 ~g~t~a~~~al~~l~~~g-d~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~ 163 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKG-DYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALAL 163 (387)
T ss_pred CCHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEE
Confidence 999999999999999999 999999999988877889999999999873234677999999998753 688999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++|+|++|...+ +++|.++|+++|+++|+|++|+.-. -+.....+ +..+++.|++|++++ +.|+||++
T Consensus 164 l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~---g~D~~~~s~~K~l~~-~~~~G~l~ 232 (387)
T PRK09331 164 LTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKL---GADFIVGSGHKSMAA-SAPSGVLA 232 (387)
T ss_pred EECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHc---CCCEEEeeCcccccC-CCCEEEEE
Confidence 9999999999888 9999999999999999999998521 11122222 234889999999764 56999988
Q ss_pred eeC
Q 021547 270 TND 272 (311)
Q Consensus 270 ~~~ 272 (311)
++.
T Consensus 233 ~~~ 235 (387)
T PRK09331 233 TTE 235 (387)
T ss_pred ECH
Confidence 753
No 140
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=2.9e-22 Score=181.15 Aligned_cols=228 Identities=15% Similarity=0.109 Sum_probs=157.7
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~ 126 (311)
+|+|+.... ..++|.+.+++.+... ....|.+..+..+|+++++++++ .+.+++++|+++++.++
T Consensus 1 ~~~~~~~~~-----~~p~~~~~~a~~~~~~--~~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~ 65 (333)
T PRK10534 1 MIDLRSDTV-----TRPSRAMLEAMMAAPV--GDDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVA 65 (333)
T ss_pred CcccccccC-----CCCCHHHHHHHHhccC--CCcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHH
Confidence 467887752 2267888899876543 23478777789999999999983 34557888888888888
Q ss_pred HHHHhcCCCCEEEecCCCCcc-hHHH-HHHcC-cEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCC
Q 021547 127 LTVITRLGAANILLPRPGWPF-YESF-AKRNH-IEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPC 197 (311)
Q Consensus 127 ~~~l~~~g~d~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~npt 197 (311)
+.+++.+| |+|+++.|.|.. |... ....+ .+++.++.. .++.+|+++|++.+++ +++++++++|+ +
T Consensus 66 l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~ 140 (333)
T PRK10534 66 LLSHCERG-EEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--N 140 (333)
T ss_pred HHHhcCCC-CeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--C
Confidence 88889999 999999888853 3221 23333 566766653 4678999999998865 58899999766 5
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceee-EEEeeCCC
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG-WLATNDPN 274 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~i~~~~~~ 274 (311)
|.+++.+++++|+++|++++++|++||+|..... .+... ..+....+.+ +.||||.|+++ +| |+++ ++
T Consensus 141 G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~---~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~-~~- 211 (333)
T PRK10534 141 GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL---KEITQYCDSF-TICLSKGLGTP---VGSLLVG-NR- 211 (333)
T ss_pred CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH---HHHHhcCCEE-EEEeEcCCCCc---ccceEEc-CH-
Confidence 9999999999999999999999999999873211 12111 1111111222 34899998764 78 5655 33
Q ss_pred CccchhhHHHHHhhhhccc---cCCCchhHHHHHhhhh
Q 021547 275 GVLQKSGIVGSIKACLGVR---SGPSTLIQVCEMFLLV 309 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~ 309 (311)
++++.++.+.... ...+.++|+++...|+
T Consensus 212 ------~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 243 (333)
T PRK10534 212 ------DYIKRARRWRKMTGGGMRQAGILAAAGLYALK 243 (333)
T ss_pred ------HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 4777777665422 2233455666665554
No 141
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.89 E-value=3.7e-21 Score=177.40 Aligned_cols=188 Identities=19% Similarity=0.197 Sum_probs=139.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~ 162 (311)
+...+|++.++++++ .+..+++++|+.++..++.+++++| |+|+++.+.|..+... +...|++++.+
T Consensus 65 p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~G-d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 135 (398)
T PRK07504 65 PTVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAG-DHVVAARALFGSCRYVVETLLPRYGIESTLV 135 (398)
T ss_pred chHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCC-CEEEEcCCchhHHHHHHHHHHhhcCeEEEEE
Confidence 457899999999883 2344567788899988888888999 9999999999875433 45678888877
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+ .+|++.+++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|....+. .++ .+
T Consensus 136 d-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~ 200 (398)
T PRK07504 136 D-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-EL 200 (398)
T ss_pred C-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hh
Confidence 4 26899999999999999999999999999999 899999999999999999999864331 111 11
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhh
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFL 307 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~ 307 (311)
+..+++.|+||.++++|+++|++++.+.+ .+.+.++.. .......+++.++.+.+-
T Consensus 201 ---gaDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~ 257 (398)
T PRK07504 201 ---GAHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKG 257 (398)
T ss_pred ---CCCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 23489999999999999999765554432 122334433 222334555555544443
No 142
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3e-21 Score=177.08 Aligned_cols=195 Identities=21% Similarity=0.236 Sum_probs=148.9
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHc
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRN 155 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~ 155 (311)
+.+|+. +....|+++++++.+ .+++++++|+++++..++.+++++| |+|+++.|.|.+.... ....
T Consensus 46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~G-D~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPG-DLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCC-CEEEEcCCCcHHHHHHHHHHHhhC
Confidence 334544 467889999999883 2469999999999999999999999 9999999999863332 2233
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
+.++..++ ..|.+.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|.....
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~---- 181 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL---- 181 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence 44555543 24889999999889999999999999999999 88899999999999999999986432
Q ss_pred CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
..++. +.. .++++|+||.++. ++.+.|++++.++ ++++++... ...+.+.+++.++.+.+.|+
T Consensus 182 ~~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~ 246 (386)
T PRK08045 182 QNPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_pred CCchh-hCC---CEEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence 12222 111 2899999999874 5688999987554 366666544 33456789999998877765
No 143
>PLN02721 threonine aldolase
Probab=99.88 E-value=1.3e-21 Score=178.10 Aligned_cols=214 Identities=15% Similarity=0.107 Sum_probs=150.2
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
..+++|+.+.+. . +++.+.+++.+.........|.+ ...++|++++++++. +.+++++++++++.
T Consensus 5 ~~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~ 69 (353)
T PLN02721 5 SRVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL 69 (353)
T ss_pred hhhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence 357899999864 2 46788888876411122223333 478999999999953 23566666676777
Q ss_pred HHHHHHhc-CCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CCccEEEEeCC
Q 021547 125 IILTVITR-LGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------ENTAAIVIINP 193 (311)
Q Consensus 125 ~~~~~l~~-~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p 193 (311)
.++.++++ +| |+|++++|+|..... .+...|.+++.++.+ .++.+|++.+++.++ +++++++++++
T Consensus 70 ~~l~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~ 146 (353)
T PLN02721 70 ISVLVHCDVRG-SEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENT 146 (353)
T ss_pred HHHHHHccCCC-CeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecc
Confidence 78887777 89 999999999865443 577889999988753 446789999999887 57889999875
Q ss_pred -CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 194 -CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 194 -~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+||+|..++.+++++|.++|+++|+++|+|++|....+ .+... ..+... ...++.|+||+|++ ++||+++
T Consensus 147 ~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~---~~~~~~-~d~~~~s~sK~l~~---~~G~~~~ 219 (353)
T PLN02721 147 HANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV---HRLVKA-ADSVSVCLSKGLGA---PVGSVIV 219 (353)
T ss_pred ccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH---HHHhhh-CCEEEEecccccCC---ceeeEEe
Confidence 78999999999999999999999999999999863211 12111 111111 12445589999764 3677544
Q ss_pred eCCCCccchhhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (311)
.++ ++++.+....
T Consensus 220 ~~~-------~~~~~~~~~~ 232 (353)
T PLN02721 220 GSK-------SFIRKAKRLR 232 (353)
T ss_pred cCH-------HHHHhHHHHH
Confidence 443 3666655543
No 144
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=3.6e-21 Score=177.13 Aligned_cols=232 Identities=13% Similarity=0.017 Sum_probs=161.9
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--C------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--P------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+.|+.+.. .+.++.+.+++.+.+..... ++. . ..-+.++|+.++++++ .++++|++|+|+
T Consensus 2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~~~g~ 69 (381)
T PRK02948 2 IYLDYAAT-----TPMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQGIYFTSGG 69 (381)
T ss_pred EeccCCCC-----CCCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcH
Confidence 56777762 35678899999887753211 111 0 0123466677777773 467899999999
Q ss_pred HHHHHHHHHHHh----cCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 120 MEAVEIILTVIT----RLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 120 ~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
++++..++.+++ ++| +.|++....|+.+. ..++..|.+++.++++ .++.+|++++++.++++++++++++
T Consensus 70 t~a~~~~~~~~~~~~~~~g-~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~ 146 (381)
T PRK02948 70 TESNYLAIQSLLNALPQNK-KHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITPDTVLASIQH 146 (381)
T ss_pred HHHHHHHHHHHHHhccCCC-CEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCCCCEEEEEEC
Confidence 999999888886 468 99999987776543 4567789999999864 3457899999999988899999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|+||||.+++ +++|.++|+++|+++|+|+++... .....+.. .+..+++.|+||.+|.+| +|+++++.
T Consensus 147 ~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g----~~~~~~~~---~~~d~~~~s~~K~~gp~G--~G~l~~~~ 214 (381)
T PRK02948 147 ANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFG----KLPIDVFE---MGIDSLSVSAHKIYGPKG--VGAVYINP 214 (381)
T ss_pred CcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhcc----ccccCccc---CCCCEEEecHHhcCCCCc--EEEEEEcC
Confidence 9999999998 888999999999999999876541 11122222 234588999999998888 78887754
Q ss_pred CCCccchhhHH-HHHhhhhccccCCCchhHHHHHhhhh
Q 021547 273 PNGVLQKSGIV-GSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 273 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.. .+.. .. ..........++++.+++.++...++
T Consensus 215 ~~-~~~~--~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 249 (381)
T PRK02948 215 QV-RWKP--VFPGTTHEKGFRPGTVNVPGIAAFLTAAE 249 (381)
T ss_pred CC-CCCC--cccCCCCCCCcCCCCccHHHHHHHHHHHH
Confidence 31 1110 00 00000001235677777777777664
No 145
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=4.5e-21 Score=176.91 Aligned_cols=188 Identities=21% Similarity=0.251 Sum_probs=142.8
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF----YESFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~ 163 (311)
....|++.++++.+ ..+ .+++++|++++.+++.+++++| |+|+++.|.|.+ +...++..|.+++.++
T Consensus 61 ~~~~Le~~lA~l~g-------~~~-~v~~~sG~~Ai~~~l~all~pG-D~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~ 131 (405)
T PRK08776 61 TRDLLGEALAELEG-------GAG-GVITATGMGAINLVLNALLQPG-DTLVVPHDAYGGSWRLFNALAKKGHFALITAD 131 (405)
T ss_pred HHHHHHHHHHHHhC-------CCc-eEEEcCHHHHHHHHHHHHhCCC-CEEEEccCCchHHHHHHHHHHHhcCcEEEEEC
Confidence 35677777777663 123 4556666899999999999999 999999999987 4455666788888776
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
. .|.+.+++.++++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.... .+.++. +.
T Consensus 132 ~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~g 196 (405)
T PRK08776 132 L-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-FG 196 (405)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cCCccc-cc
Confidence 4 3789999998889999999999999999977 9999999999999999999998522 122322 22
Q ss_pred CCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
..+++.|++|.++.+ ++..|++++.++ ++.+++..... ...+.+++.++++.+.++
T Consensus 197 ---aDivv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~ 254 (405)
T PRK08776 197 ---ADLVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLRGLR 254 (405)
T ss_pred ---CCEEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhC
Confidence 228999999999877 478899887654 36666654432 344678888888776554
No 146
>PLN02483 serine palmitoyltransferase
Probab=99.88 E-value=5.9e-21 Score=180.25 Aligned_cols=213 Identities=17% Similarity=0.147 Sum_probs=152.1
Q ss_pred CCCeeecCCCCCCCCCCCC-----CcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 44 PRPVIPLGHGDPAAFPCFR-----TAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~-----~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.++++||+..+. .++. +.+.+.+++.+.-.+ ..-..|+...+..++++++|++++ .++.++++
T Consensus 99 ~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~ 168 (489)
T PLN02483 99 TRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFG 168 (489)
T ss_pred CceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEEC
Confidence 577899999884 3443 234555555443211 112237777788999999999995 24456666
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CC-----
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------EN----- 184 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~----- 184 (311)
+| ..+...++.+++++| |.|+++.|+|..+...++..|++++.++.. |.+++++.++ ++
T Consensus 169 ~G-~~an~~~i~al~~~G-d~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 169 MG-YATNSTIIPALIGKG-GLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred CH-HHHHHHHHHHhCCCC-CEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence 65 556667888899999 999999999999999999999999998753 4455544332 22
Q ss_pred ccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 185 TAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 185 ~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
.++++++.+ .|++|...+ +++|+++|++||++||+||+|+...++ |.........+..+.+|+++||||+|+++
T Consensus 240 ~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~ 316 (489)
T PLN02483 240 KKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC 316 (489)
T ss_pred ceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence 255655554 689999988 999999999999999999999843332 22222222333345679999999999988
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
| ||++++. ++++.++..
T Consensus 317 G---G~i~~~~--------~li~~l~~~ 333 (489)
T PLN02483 317 G---GYIAGSK--------ELIQYLKRT 333 (489)
T ss_pred c---eEEEcCH--------HHHHHHHHh
Confidence 8 9998643 477887765
No 147
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.9e-21 Score=177.08 Aligned_cols=189 Identities=15% Similarity=0.160 Sum_probs=145.8
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRH 161 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~ 161 (311)
.+...++++.++++++ .+..++++++++|+..++.+++++| |+|+++.|.|.+.. ..+...|++++.
T Consensus 63 ~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~G-D~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 63 NPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPG-DRVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred ChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 3467889999999883 3457777888999999999999999 99999999998754 345677888877
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... . ++.
T Consensus 134 vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~---~l~- 198 (398)
T PRK08249 134 CET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N---PLA- 198 (398)
T ss_pred cCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C---chh-
Confidence 653 4889999999999999999999999999999 888999999999999999999964322 1 221
Q ss_pred cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
+. ..++++|+||.++.+|.++|++++.++ +++++++.... .....+++.++.+.+-+
T Consensus 199 ~~---~Divv~S~sK~l~g~~~~~gG~vv~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~l~~l 256 (398)
T PRK08249 199 LG---ADLVIHSATKFLSGHADALGGVVCGSK-------ELMEQVYHYREINGATMDPMSAYLILRGM 256 (398)
T ss_pred hC---CCEEeccCceecCCCCCceEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhCc
Confidence 11 228889999999988888755454432 36777766543 34566777777665544
No 148
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=5.4e-21 Score=176.61 Aligned_cols=188 Identities=19% Similarity=0.189 Sum_probs=144.5
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+...+|++.++++++ .+..+++++++.++.+++.+++++| |+|+++.|.|... ...++..|++++.+
T Consensus 65 p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~G-d~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v 135 (403)
T PRK07503 65 PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPG-DEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV 135 (403)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCC-CEEEEccCccchHHHHHHHHHhhCCEEEEEe
Confidence 457889999999884 2345677788899999999999999 9999999998653 34456789998888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++.+++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.... +. ++. +
T Consensus 136 d~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~-~~---~l~-~ 200 (403)
T PRK07503 136 DLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL-QR---PLE-L 200 (403)
T ss_pred CCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chh-h
Confidence 752 789999999889999999999999999998 89999999999999999999986432 22 221 1
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh--hc-cccCCCchhHHHHHhhhh
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC--LG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+..++++|+||.++.+| .+.|+++. ++ +++++++.. .. .+...+++.++.+.+-|+
T Consensus 201 ---g~Di~v~S~tK~l~g~gd~~gG~v~~-~~-------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~ 260 (403)
T PRK07503 201 ---GADLVVHSATKYLGGHGDITAGLVVG-GK-------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK 260 (403)
T ss_pred ---CCCEEEccccccccCCCceeEEEEEc-CH-------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc
Confidence 22399999999999876 67788774 33 366766532 22 345677777776665543
No 149
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=7.6e-21 Score=175.90 Aligned_cols=200 Identities=18% Similarity=0.171 Sum_probs=152.0
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
++.|+++.+ .++++.+++++.+.+..... ..|....+ ..++|+.++++++ ...++|++++|+
T Consensus 18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA 86 (397)
T ss_pred eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence 689998874 35678899999888753221 13443333 3577777777773 345579999999
Q ss_pred HHHHHHHHHHH---hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 120 MEAVEIILTVI---TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 120 ~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
++++..++.++ .++| |+|++..+.|.+. ...++..|.+++.++... +++.++++++++.++++++++++++
T Consensus 87 t~~l~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~lv~i~~ 164 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPG-DEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE-ATGELHPDDLASLLSPRTRLVAVTA 164 (397)
T ss_pred HHHHHHHHHHHHhcCCCC-CEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc-cCCCcCHHHHHHhcCCCceEEEEeC
Confidence 99998877776 5789 9999999998654 355677899999998753 2467899999999998999999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|+||||..++ +++|.++|+++|+++++|+++.. +.....+.. .+..+++.|++|.+ |.|+|+++++.
T Consensus 165 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~---~~~d~~~~s~~K~~---g~~~G~l~~~~ 231 (397)
T TIGR01976 165 ASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQA---TGADFLTCSAYKFF---GPHMGILWGRP 231 (397)
T ss_pred CCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHH---cCCCEEEEechhhc---CCceEEEEEcH
Confidence 9999999998 99999999999999999999853 212222222 22337778999986 45789998854
No 150
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.88 E-value=5.1e-21 Score=176.55 Aligned_cols=195 Identities=17% Similarity=0.163 Sum_probs=148.8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----chHHHHHHc
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----FYESFAKRN 155 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----~~~~~~~~~ 155 (311)
+.+|+. +...+|++.++++.+ .++.+++++++.++..++.+++++| |+|+++...|. .+...++..
T Consensus 64 Y~r~~~-p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 64 YSRYGN-PTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAG-DRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCC-CEEEEccCCcchHHHHHHHHHHHc
Confidence 334444 457899999999983 3578888888999999999999999 99999886653 345567788
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
|++++.++. .|++.+++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+...+..
T Consensus 134 G~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~-- 201 (403)
T PRK07810 134 GVETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR-- 201 (403)
T ss_pred CcEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 999998864 2889999999999999999999999999998 9999999999999999999998643321
Q ss_pred CCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++. + +..+++.|++|.++.+|.++ |++++++. .+.++++.+ .......+++.++.+.+-|+
T Consensus 202 --~~~-~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 202 --GLP-L---GADVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred --hhh-c---CCcEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 111 1 23489999999999999998 66665432 122334433 33445778888887766554
No 151
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.88 E-value=1.2e-20 Score=174.95 Aligned_cols=233 Identities=15% Similarity=0.112 Sum_probs=163.2
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++++|+.++ |.++..+|.+++++.++++..... .|.......+|++.+++++. .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~ 112 (402)
T TIGR01821 44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT 112 (402)
T ss_pred CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence 47789999998 567899999999999988742211 12222345678888888773 23456666
Q ss_pred ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---C-CccEEEEe
Q 021547 118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---E-NTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~-~~~~i~i~ 191 (311)
+|++++..++..+.. ++ +.|+.....|......++..|.++..++. .|.+++++.++ + ++++++++
T Consensus 113 sG~~an~~ai~~l~~~~~~-~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e 184 (402)
T TIGR01821 113 SGYVANDATLATLAKIIPG-CVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFE 184 (402)
T ss_pred chHHHHHHHHHHhhCCCCC-CEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence 668899988888865 67 77777777777777777888887765542 26666766654 2 57889999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+|+||+|.+.+ +++|.++|+++|+++|+||+|+...++..........+- ....|+++||||.|+++| ||+++
T Consensus 185 ~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~ 258 (402)
T TIGR01821 185 SVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAA 258 (402)
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeec
Confidence 99999999998 899999999999999999999843332111111111111 123588899999999988 99876
Q ss_pred eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++.+.... .++.+.++.+++++.+.|+
T Consensus 259 ~~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~ 292 (402)
T TIGR01821 259 SR--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIR 292 (402)
T ss_pred CH--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHH
Confidence 43 3667666432 2234567777777766654
No 152
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=9.4e-21 Score=174.23 Aligned_cols=190 Identities=20% Similarity=0.161 Sum_probs=141.7
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEE
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVR 160 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~ 160 (311)
+.+...+|+++++++++. +..++++++++|+.+++.+++++| |+|+++.|.|......+ +..|++++
T Consensus 59 ~~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~y~~t~~~~~~~~~~~gi~~~ 129 (388)
T PRK07811 59 GNPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPG-DHIVIPNDAYGGTFRLIDKVFTRWGVEYT 129 (388)
T ss_pred CCccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCC-CEEEEcCCCchHHHHHHHHhCcCCCeEEE
Confidence 346788999999999943 234555667899999999999999 99999999998543332 23577777
Q ss_pred EeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 161 ~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
.++. .|++.+++.+++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+..... .++.
T Consensus 130 ~~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~ 195 (388)
T PRK07811 130 PVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPLA 195 (388)
T ss_pred EeCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cchh
Confidence 6653 3889999999889999999999999999877 999999999999999999999864321 1221
Q ss_pred ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
. +..+++.|++|.++.+| .+.||++++++ ++.++++.... .....+++.++.+..-|
T Consensus 196 -~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L 254 (388)
T PRK07811 196 -L---GADVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGL 254 (388)
T ss_pred -h---CCcEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 1 12399999999998865 57799887654 35666655533 23455666555444433
No 153
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.88 E-value=1.5e-20 Score=175.44 Aligned_cols=204 Identities=20% Similarity=0.251 Sum_probs=154.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--C---YAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~---Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
+.+++.|+++.. .+.++.+.+++.+.+...... . |.. ...+.++|+.++++++. -.+++|++
T Consensus 30 ~~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~ 99 (424)
T PLN02855 30 GSKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA-----STSREIVF 99 (424)
T ss_pred CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC-----CCCCEEEE
Confidence 457899999874 356788999988876522110 1 110 11245888899988843 13579999
Q ss_pred eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
|+|+++++..++.++ +++| |+|+++.+.|++ +...++..|.+++.+++.. ++.++++.+++.+++++++
T Consensus 100 t~g~t~al~~i~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~l 176 (424)
T PLN02855 100 TRNATEAINLVAYTWGLANLKPG-DEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP--DEVLDVEQLKELLSEKTKL 176 (424)
T ss_pred eCCHHHHHHHHHHHhhhhcCCCc-CEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC--CCCcCHHHHHHHhccCceE
Confidence 999999999998864 5789 999999998874 4556678899999998753 3458999999999889999
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
+++++++||||..+| +++|.++|+++|+++++|++|+. +.....+..+. ..+++.|++|.+|.+| +||
T Consensus 177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~---~d~~~~s~~K~~gp~G--~G~ 244 (424)
T PLN02855 177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLG---ADFLVASSHKMCGPTG--IGF 244 (424)
T ss_pred EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcC---CCEEEeecccccCCCc--cEE
Confidence 999999999999999 78999999999999999999964 22222232222 3488999999776555 899
Q ss_pred EEeeC
Q 021547 268 LATND 272 (311)
Q Consensus 268 i~~~~ 272 (311)
++++.
T Consensus 245 l~~~~ 249 (424)
T PLN02855 245 LWGKS 249 (424)
T ss_pred EEEch
Confidence 98754
No 154
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=9.9e-21 Score=173.33 Aligned_cols=189 Identities=16% Similarity=0.155 Sum_probs=147.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~ 162 (311)
+....|+++++++. ..+++++++|+++++.+++.+++++| |+|+++.|.|..... .....|++++.+
T Consensus 53 pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~G-d~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v 123 (388)
T PRK08861 53 PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPD-DLIVAPHDCYGGTYRLFNTRANKGDFKVQFV 123 (388)
T ss_pred chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCC-CEEEEcCCchHHHHHHHHHHHhcCCeEEEEE
Confidence 46788999999998 35799999999999999999999999 999999999986433 233456777776
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .++. +
T Consensus 124 d~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~pl~-~ 188 (388)
T PRK08861 124 DQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KPLE-L 188 (388)
T ss_pred CC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CCcc-c
Confidence 42 4889999999889999999999999999999 788999999999999999999864322 1221 1
Q ss_pred CCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 243 GSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
. -.++++|++|.++.+ +...|++++.++ ++.++++.... .+...+|+..+.+.+-|+
T Consensus 189 G---aDivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~ 247 (388)
T PRK08861 189 G---ADFVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYMTLRGIR 247 (388)
T ss_pred C---CCEEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHHHHhcCC
Confidence 2 238999999998875 478899887543 35666665533 356677887776665554
No 155
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=1.4e-20 Score=174.22 Aligned_cols=206 Identities=24% Similarity=0.276 Sum_probs=156.1
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
+..+++++.|.|+ ++.|+.+.+++.+. . ....|.+ ..|..++++++++++.+.+|.+ .++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceeccCc
Confidence 4567999999965 66777777766655 2 2234555 6799999999999999987753 346766664
Q ss_pred hH-HHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcC----cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547 119 CM-EAVEIILTVITRL--GAANILLPRPGWPFYESFAKRNH----IEVRHFDLLPERGWEVDLEAVEALADENTAAIVII 191 (311)
Q Consensus 119 ~~-~a~~~~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 191 (311)
++ ++..+++.++..+ | |+|+++.+.|+.+...+...+ .+++.++.. +++.+|++++++.+.+++++++++
T Consensus 90 g~~~~~~~~~~~~~~~~~g-d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~t~~viv~ 166 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKR-NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSEEVAALMVQ 166 (398)
T ss_pred hHHHHHHHHHHHHhcccCC-CEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCCCeEEEEEE
Confidence 44 4555556666665 8 999999999999988888777 888888764 345689999999998899999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeE
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGW 267 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~ 267 (311)
+|+ |+|.+.+ .+++|.++|+++|+++|+|++|...... ..... .+..+++.|++|++ +| |+++||
T Consensus 167 ~~~-~~G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~~----~~~~~---~~~d~~~~s~~K~~-~p~g~Ggp~~g~ 235 (398)
T cd00613 167 YPN-TLGVFED--LIKEIADIAHSAGALVYVDGDNLNLTGL----KPPGE---YGADIVVGNLQKTG-VPHGGGGPGAGF 235 (398)
T ss_pred CCC-CCceecc--hHHHHHHHHHhcCCEEEEEeccccccCC----CChHH---cCCCEEEeeccccC-CCCCCCCCceeE
Confidence 985 8999853 4699999999999999999987642211 11111 12459999999997 66 799999
Q ss_pred EEeeC
Q 021547 268 LATND 272 (311)
Q Consensus 268 i~~~~ 272 (311)
+.++.
T Consensus 236 l~~~~ 240 (398)
T cd00613 236 FAVKK 240 (398)
T ss_pred EEEhh
Confidence 99854
No 156
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.87 E-value=2e-20 Score=173.63 Aligned_cols=232 Identities=15% Similarity=0.137 Sum_probs=159.6
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++++|+..+ |.++..+|.+.+++.+.+..... ..|.+.....+|++.+++++. .+ ..++.+
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~-~~~~~~ 113 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KE-AALVFT 113 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CC-cEEEEC
Confidence 47799999998 45788899999999988764221 113333456678888888772 23 344444
Q ss_pred ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547 118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~ 191 (311)
+|+++...++..+.. ++ +.|+.....|......++..+.+...++. .|++++++.++ +++++++++
T Consensus 114 sG~~an~~ai~~l~~~~~~-~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~ 185 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPD-CVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFE 185 (407)
T ss_pred cHHHHHHHHHHHHhCCCCC-CEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEe
Confidence 556787777777764 67 77777777777777777778877665543 26677777664 467899999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+++||+|...+ +++|.++|+++|+++|+||+|+...++..........+. ....|+++||||.||++| ||+++
T Consensus 186 ~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~ 259 (407)
T PRK09064 186 SVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAG 259 (407)
T ss_pred CCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEec
Confidence 99999999998 999999999999999999999843332111111111111 223688999999999888 99887
Q ss_pred eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l 308 (311)
+. ++++.+..... ++.+.++.+++++.+.|
T Consensus 260 ~~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al 292 (407)
T PRK09064 260 SA--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASI 292 (407)
T ss_pred CH--------HHHHHHHHhCccccccCcCCHHHHHHHHHHH
Confidence 43 36666654422 23455666666665554
No 157
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=9.9e-21 Score=174.26 Aligned_cols=188 Identities=18% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~ 162 (311)
+...+|++.++++. ..+++++++|+++|+.+++.+++++| |+|+++.|.|..+.. .+...|++++.+
T Consensus 65 pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~G-D~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v 135 (394)
T PRK07050 65 PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAG-DDVLIPDNAYGPNRDHGEWLARDFGITVRFY 135 (394)
T ss_pred HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCC-CEEEEecCCcccHHHHHHHHHHhcCeEEEEE
Confidence 45678888888887 34689999999999999999999999 999999999998663 567789998887
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. +.+.+++.+++++++|++++|+||+|.. .++++|.++|+++|+++|+|++|....+ ..++.
T Consensus 136 d~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~~~l~-- 199 (394)
T PRK07050 136 DPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----FKPFE-- 199 (394)
T ss_pred CCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----cCHHH--
Confidence 531 4577888999999999999999999754 4599999999999999999999976322 11111
Q ss_pred CCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 243 GSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.+..|++.|+||.++. .+.+.|++++.++ +++++++..+. .+.+.+++..+.+.+.|
T Consensus 200 --~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~lr~l 258 (394)
T PRK07050 200 --HGVDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSLVLRGL 258 (394)
T ss_pred --cCCeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence 1234999999999864 3467899887654 36777766543 45567777766655443
No 158
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.87 E-value=1.6e-20 Score=171.99 Aligned_cols=191 Identities=17% Similarity=0.147 Sum_probs=149.4
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEE
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVR 160 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~ 160 (311)
..+...+|++.+++++. .++.++++++++|+..++.+++++| |+|+++.+.|.+... .++..|.++.
T Consensus 38 ~~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~ 108 (369)
T cd00614 38 GNPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAG-DHVVASDDLYGGTYRLFERLLPKLGIEVT 108 (369)
T ss_pred CChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCC-CEEEECCCCcchHHHHHHHHHhhcCeEEE
Confidence 34567889999998883 3567888888999999999999999 999999999987543 3557788888
Q ss_pred EeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 161 ~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
.++.. +++.+++.+++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++|+...+. .++.
T Consensus 109 ~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~~ 174 (369)
T cd00614 109 FVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPLE 174 (369)
T ss_pred EeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chhh
Confidence 87642 688999999889999999999999999998 899999999999999999999864331 1111
Q ss_pred ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547 241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~ 309 (311)
.+..+++.|+||.++.+| .+.||++++++ +++++++... ..+...+++.++++.+.|+
T Consensus 175 ----~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 234 (369)
T cd00614 175 ----LGADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLLLRGLK 234 (369)
T ss_pred ----hCCcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence 123489999999998877 88999997542 3666666553 2445677777776655543
No 159
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=1.4e-20 Score=173.14 Aligned_cols=188 Identities=17% Similarity=0.151 Sum_probs=142.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+...+|++.++++++ .+..++++++++++.+++.+++++| |+|+++.|.|... ...+...|++++.+
T Consensus 59 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~G-d~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v 129 (391)
T TIGR01328 59 PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAG-DHLISDECLYGCTFALLEHALTKFGIQVDFI 129 (391)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEecCcchHHHHHHHHHHhcCCeEEEEE
Confidence 356789999999994 3457888888999999999999999 9999999988643 34556688888888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
++. |++.+++.+++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ +. ++..
T Consensus 130 d~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~---~~~~- 194 (391)
T TIGR01328 130 NMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TN---PVAL- 194 (391)
T ss_pred CCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CC---chhc-
Confidence 752 789999999889999999999999999998 88999999999999999999985332 11 1211
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh--c-cccCCCchhHHHHHhhh
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL--G-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~q~~~~~~l 308 (311)
+..+++.|+||.++.+|.++|.+++.++ +++++++... . .+...+++..+.+.+-|
T Consensus 195 ---g~Divv~S~sK~lgg~g~~~gG~v~~~~-------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L 253 (391)
T TIGR01328 195 ---GVDVVVHSATKYIGGHGDVVAGLICGKA-------ELLQQIRMVGIKDMTGSVISPFDAWLILRGL 253 (391)
T ss_pred ---CCCEEEccccccccCCCCceEEEEEcCH-------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCc
Confidence 2238899999999999988655444443 3666666431 1 23355666555555444
No 160
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=2.1e-20 Score=173.24 Aligned_cols=217 Identities=14% Similarity=0.076 Sum_probs=157.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
...++|..+. ...++.+++++...+.. +....|....+..++++..++++.+.+|.+ ...|++++
T Consensus 19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s- 89 (402)
T cd00378 19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS- 89 (402)
T ss_pred HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-
Confidence 4578887775 24578999999876521 112245556677788887777776666643 34555554
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-----HHHcCcEEEEeeccCC-CCcccCHHHHHhhcC-CCccEEEEe
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESF-----AKRNHIEVRHFDLLPE-RGWEVDLEAVEALAD-ENTAAIVII 191 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~i~i~ 191 (311)
+++++..++.+++++| |+|+++.|.|..+... ++..|.+++.+++..+ +++.+|++.+++.+. .++++++++
T Consensus 90 gt~a~~~~l~~l~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~ 168 (402)
T cd00378 90 GSQANLAVYFALLEPG-DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG 168 (402)
T ss_pred cHHHHHHHHHHhcCCC-CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence 5799999999999999 9999999999866433 6667877777776443 267899999999884 588999988
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY-GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay-~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+++||+ ..+ +++|+++|+++|+++|+|++| .++.+.|....++. . ..++++|+||++ +|+|.||+++
T Consensus 169 ~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~---~dv~~~s~sK~l--~G~~gg~i~~ 236 (402)
T cd00378 169 ASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G---ADVVTTTTHKTL--RGPRGGLILT 236 (402)
T ss_pred CcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C---CcEEEeccccCC--CCCCceEEEe
Confidence 888764 334 899999999999999999996 44555443222332 1 127899999985 8899999998
Q ss_pred eCCCCccchhhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (311)
+++ ++++++....
T Consensus 237 ~~~-------~~~~~l~~~~ 249 (402)
T cd00378 237 RKG-------ELAKKINSAV 249 (402)
T ss_pred ccH-------HHHHHHHHHh
Confidence 653 3667766543
No 161
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.87 E-value=1.1e-20 Score=172.84 Aligned_cols=194 Identities=18% Similarity=0.175 Sum_probs=146.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHc
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRN 155 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~ 155 (311)
+.+|+. +...+|++.++++.+. +..++++|+++++.+++ .++++| |+|+++.|.|.+. ...++..
T Consensus 46 y~r~~~-pt~~~le~~la~l~g~--------~~~~~~~sG~~ai~~~~-~ll~~G-d~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 46 YSRTGN-PTRGVLEQAIADLEGG--------DQGFACSSGMAAIQLVM-SLFRSG-DELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred ccCCCC-chHHHHHHHHHHHhCC--------CcEEEEcCHHHHHHHHH-HHhCCC-CEEEEecCCcCcHHHHHHHHhhcc
Confidence 334444 4578899999999842 34577888899999876 567899 9999999999864 3455668
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
|++++.++. .|++.+++.++++++++++++|+||+|. ..++++|+++|+++|+++|+|++|...... .
T Consensus 115 G~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-~- 182 (366)
T PRK08247 115 NVRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-R- 182 (366)
T ss_pred CceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc-C-
Confidence 999888864 3889999999889999999999999865 456999999999999999999999642221 1
Q ss_pred CCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++. .+..|+++|+||.++.+ +++.|+++++++ .++++++..+. ...+.+++.|+++.+.|+
T Consensus 183 --p~~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 183 --PLE----EGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred --chh----cCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 111 23459999999998765 569999887543 36666665543 345678888888766553
No 162
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.8e-20 Score=172.01 Aligned_cols=188 Identities=15% Similarity=0.131 Sum_probs=142.9
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH---HHcCcEEEEe
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA---KRNHIEVRHF 162 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~ 162 (311)
.+...+|++.+++++. .+++++++|+++|+..++.+++++| |+|+++.+.|..+...+ +..|+++..+
T Consensus 52 np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~G-D~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~ 122 (385)
T PRK08574 52 NPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAG-DRVVLPMEAYGTTLRLLKSLEKFGVKVVLA 122 (385)
T ss_pred CccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence 3467899999999993 4578889999999999999999999 99999999999876655 4457666654
Q ss_pred eccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 163 DLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
+ ++.+.+++.+++ +++++++.+|+||||.+++ +++|+++|+++|+++|+|++|+.... ..++.
T Consensus 123 ~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~l~- 186 (385)
T PRK08574 123 Y--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRPLR- 186 (385)
T ss_pred C--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CChhh-
Confidence 3 367899999987 8999999999999999999 88999999999999999999974221 11121
Q ss_pred cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.+..+++.|+||.++.+|-.+ |++++.++ +++++++.... .+...+++..+.+.+-|
T Consensus 187 ---~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~~a~l~l~~l 245 (385)
T PRK08574 187 ---HGADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPFEAYLVLRGL 245 (385)
T ss_pred ---hCCcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHccc
Confidence 123499999999998888765 66776543 36666665533 34455666555544433
No 163
>PRK06460 hypothetical protein; Provisional
Probab=99.87 E-value=1.9e-20 Score=171.59 Aligned_cols=183 Identities=14% Similarity=0.151 Sum_probs=133.6
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----chHHHHHHcCcEEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----FYESFAKRNHIEVRH 161 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----~~~~~~~~~g~~~~~ 161 (311)
.+...+|+++++++++. . ..+++ +++++++..++.+++++| |+|+++.+.|. .|...++..|+++..
T Consensus 44 ~p~~~~L~~~lA~l~g~------~-~~v~~-~sG~~ai~~~l~al~~~G-d~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 44 NPTVLELTKKIVELENA------E-MGVAF-SSGMGAISTTALALLKPG-NSVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred CccHHHHHHHHHHHhCC------C-cEEEe-CCHHHHHHHHHHHHhCCC-CEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 45788999999999842 2 24444 555789999999999999 99999976553 455678889999888
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
++.. +.+.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|+... . ..++
T Consensus 115 ~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~-~---~~~l-- 178 (376)
T PRK06460 115 SNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI-N---QKPL-- 178 (376)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc-c---CChh--
Confidence 7642 234456666778999999999999999999 6778999999999999999998531 1 1111
Q ss_pred cCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHH
Q 021547 242 FGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVC 303 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 303 (311)
..+..|++.|+||.|+.+ |.++||++++. +++++++.... .+.+.++...+.
T Consensus 179 --~~~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~ 232 (376)
T PRK06460 179 --ELGADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPHAAYL 232 (376)
T ss_pred --hcCCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHHHHHH
Confidence 112459999999998644 37899988642 36777765533 333445544443
No 164
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=8.3e-21 Score=176.26 Aligned_cols=160 Identities=23% Similarity=0.185 Sum_probs=133.1
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+...+|++.++++++ .+..+++++++.++..++.+++++| |+|+++.+.|.+. ...++..|++++.+
T Consensus 57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~G-d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v 127 (418)
T TIGR01326 57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAG-DNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV 127 (418)
T ss_pred hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCC-CEEEEECCCcHHHHHHHHHHHHHcCcEEEEE
Confidence 456788999998883 3568899999999999999999999 9999999998653 34567789999888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++.++++++++++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ ..++
T Consensus 128 ~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~~~l--- 190 (418)
T TIGR01326 128 DPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----CRPI--- 190 (418)
T ss_pred CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----CCch---
Confidence 641 789999999989999999999999999998 89999999999999999999974211 1121
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
..+..|++.|+||.++.+|+|+||++++..
T Consensus 191 -~~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 191 -DHGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred -hcCCeEEEECccccccCCccceEEEEEecc
Confidence 123569999999999999999999998653
No 165
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=3.8e-20 Score=169.92 Aligned_cols=188 Identities=22% Similarity=0.281 Sum_probs=142.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCc
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHI 157 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~ 157 (311)
+|.. +...++++.++++++ .+++++++++++++.+++.+++++| |+|+++.+.|.+. ...++..|.
T Consensus 50 r~~~-p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~G-d~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 50 RYAN-PTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAG-DHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred cCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEecCCcchHHHHHHHHHHHhCC
Confidence 4443 457889999999883 3578889999999999999999999 9999999888653 346677899
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI 237 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~ 237 (311)
+++.++.. |++.+++.+++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|....+. .
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~-~--- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ-Q--- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-C---
Confidence 98888652 788999988889999999999999999998 899999999999999999999864321 1
Q ss_pred cccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHH
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEM 305 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~ 305 (311)
++. + +..|++.|+||.++.+|.++ |++++ ++ ++++.++... ..+...+++..+.+.
T Consensus 186 pl~-~---g~Divv~S~sK~l~g~g~~~gG~vv~-~~-------~~~~~l~~~~~~~g~~~~p~~a~~~l 243 (380)
T TIGR01325 186 PLK-L---GADVVVYSATKHIDGQGRVMGGVIAG-SE-------ELMAEVAVYLRHTGPAMSPFNAWVLL 243 (380)
T ss_pred chh-h---CCCEEEeeccceecCCCCeEEEEEEe-CH-------HHHHHHHHHHHhhCCCCCHHHHHHHH
Confidence 111 1 23488899999999999888 55554 32 3566666553 223344555444443
No 166
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3e-20 Score=170.99 Aligned_cols=189 Identities=16% Similarity=0.119 Sum_probs=137.9
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRH 161 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~ 161 (311)
.+...+|++.++++++ .++.+++++++.++..++.+++++| |+|+++.|.|...... .+..|+++..
T Consensus 60 ~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~G-d~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~ 130 (386)
T PRK06767 60 NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAG-DHIICSNGLYGCTYGFLEVLEEKFMITHSF 130 (386)
T ss_pred CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence 3457899999999984 2345666666789999999999999 9999999988865443 3344555555
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+ +. ++.
T Consensus 131 ~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~~---pl~- 195 (386)
T PRK06767 131 CDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-QR---PLE- 195 (386)
T ss_pred eCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chh-
Confidence 432 3789999999889999999999999999999 89999999999999999999975322 11 121
Q ss_pred cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHh-hhh-ccccCCCchhHHHHHhhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIK-ACL-GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~q~~~~~~l~ 309 (311)
. +..+++.|+||.++.+|.++ ||+++++ +++.++. ... ......+++.++++.+.|+
T Consensus 196 ~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 196 L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK 255 (386)
T ss_pred c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 1 12388899999999999986 8887754 2444432 222 2233456776666555443
No 167
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=1.4e-20 Score=171.61 Aligned_cols=190 Identities=15% Similarity=0.108 Sum_probs=140.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL 139 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl 139 (311)
.++++.+.+++.+.+. ...|... .-..++++.+++++ |.+ ..+.+++++|+++++..++.+++++| |+|+
T Consensus 8 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~~~~~~~~t~al~~~~~~~~~~g-~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVF----QTE-NGLTFLLSGSGTGAMEAALSNLLEPG-DKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHh----cCC-CCCEEEEecCcHHHHHHHHHHhCCCC-CEEE
Confidence 4677888888864432 1122211 11335556666665 321 33457888888999999999999999 9999
Q ss_pred ecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 140 LPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 140 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
++.++|.+ +...++..|.+++.++.++ ++.+|.+.+++.+++ +++++++++|+||+|..++ +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99888765 5677888999999998653 357899999999887 8999999999999999998 88899999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|+++++|++|+. +. ....+... +..+++.|++|+++.| .++||+++++
T Consensus 154 ~~~li~D~~~~~---g~-~~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~ 201 (356)
T cd06451 154 DALLIVDAVSSL---GG-EPFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE 201 (356)
T ss_pred CCEEEEeeehhc---cC-cccccccc---CccEEEecCchhccCC-CCcceeEECH
Confidence 999999999873 11 12222222 2236678999998765 3689998854
No 168
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=4.9e-20 Score=169.11 Aligned_cols=191 Identities=22% Similarity=0.191 Sum_probs=145.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCC-CC-----C--CCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChHHHHHHHHHHHh
Q 021547 61 FRTAAVAEDAIVDSVRSSMFN-CY-----A--PMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVIT 131 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~-~Y-----~--~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l~ 131 (311)
-++++.+.+++.+.+.....+ .. . ......++|+.++++++ .. ++++++|+|+++++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 356788889988776422110 00 0 01234567788888884 23 6789999999999999999998
Q ss_pred c---CCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 132 R---LGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 132 ~---~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
. +| |+|+++.+.|++. ...++..|++++.++.+ .++.+|++++++.+.++++++++++++||||...+
T Consensus 83 ~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~-- 157 (373)
T cd06453 83 RANKPG-DEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP-- 157 (373)
T ss_pred hcCCCC-CEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC--
Confidence 7 88 9999999999874 34556789999999874 45679999999999889999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++|.++|+++|++|++|++|+... ....+... +..+++.|++|.++. .++|++++++
T Consensus 158 -~~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~ 215 (373)
T cd06453 158 -VKEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE 215 (373)
T ss_pred -HHHHHHHHHHcCCEEEEEhhhhcCc----eeeecccc---CCCEEEeccccccCC--CCcEEEEEch
Confidence 8899999999999999999997522 11122222 223777899999765 5689988854
No 169
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=3.5e-20 Score=170.19 Aligned_cols=194 Identities=18% Similarity=0.159 Sum_probs=148.6
Q ss_pred CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc
Q 021547 61 FRTAAVAEDAIVDSVRSSM----FNCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR 132 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~ 132 (311)
+++|+.+.+++.+.+.... ...|.. ..+..++|+.++++++. . ..++|++|+|+++++..++.++++
T Consensus 10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA----P-SSAHVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc----C-CCCeEEEeCCHHHHHHHHHHhccC
Confidence 5778899999988876432 112322 24567888888888842 1 335899999999999999999989
Q ss_pred CCCCEEEecCCCCcchH----HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHH
Q 021547 133 LGAANILLPRPGWPFYE----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208 (311)
Q Consensus 133 ~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~ 208 (311)
+| |+|+++.+.|..+. ..++..|.+++.++.. .++.+|++++++.++++++++++++|+||||..++ +++
T Consensus 85 ~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~ 158 (376)
T TIGR01977 85 EG-DHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE 158 (376)
T ss_pred CC-CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence 99 99999999998754 3556669999988764 34678999999999889999999999999999999 788
Q ss_pred HHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 209 l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
|.++|+++|+++|+|++++... ....+.. .+..+++.|++|+++.|. .+|.+++.+.
T Consensus 159 i~~l~~~~~~~livD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~l~~p~-g~g~l~~~~~ 215 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGV----IPIDMTE---LAIDMLAFTGHKGLLGPQ-GTGGLYIREG 215 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCc----cCCCchh---cCCCEEEecccccccCCC-CceEEEEcCC
Confidence 9999999999999999998522 1112221 223488999999876553 3566666554
No 170
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=6.3e-20 Score=168.66 Aligned_cols=247 Identities=17% Similarity=0.153 Sum_probs=172.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-..+.+. .+|.+.+++.++++... ... .....+++..+++++.+..+ .+.+++++++++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~ 97 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE 97 (377)
T ss_pred CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence 35889999998864333344 77899999999987432 122 23456889999999987543 257999999999
Q ss_pred HHHHHHHHHh-cCCCCEEEecCCCCcchH-HHHHHcCcEEE---EeeccCCCCc--ccCHHHHHhhcCCCccEEEEeCCC
Q 021547 122 AVEIILTVIT-RLGAANILLPRPGWPFYE-SFAKRNHIEVR---HFDLLPERGW--EVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 122 a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
|+..+++... -+|.++|++.++.|++.. ......+.... ..+..+...+ ..|++.+++.+.++++++++..++
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~ 177 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence 9999998643 245367999988887543 22222222110 0111100000 117899999888888888988889
Q ss_pred CCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 195 NPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 195 nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+++|.. .+++.+++|.++|++||+++|+||+|.++.+.|..+ .+..+...+++ .++||.++ +|+|+||++++.
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~- 251 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK- 251 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence 999886 578999999999999999999999999877666432 22223222233 37999988 899999998753
Q ss_pred CCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 274 NGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++.+... ...+.+.++++|+++.+.|+
T Consensus 252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 281 (377)
T PRK02936 252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQ 281 (377)
T ss_pred -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 366766544 33456789999999988875
No 171
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.86 E-value=1.1e-19 Score=165.85 Aligned_cols=197 Identities=18% Similarity=0.159 Sum_probs=151.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+-+++||-+.--..+ ....+++++.++|.+... .|. +..++++++.+++.+.+| .+++++|+|+++|
T Consensus 6 ~~~~~ina~g~~t~~-g~s~~~~~v~~a~~~~~~-----~~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~a 72 (363)
T TIGR01437 6 GLKKVINASGKMTIL-GVSTVSDEVADAQKRGAQ-----NYF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAG 72 (363)
T ss_pred CCceEEECCcEeecC-CCCCCCHHHHHHHHHHHh-----cCC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHH
Confidence 457778776543211 234578999999999864 243 356777777777777655 3478999999999
Q ss_pred HHHHHHHHhcCCCC---------------EEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 123 VEIILTVITRLGAA---------------NILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 123 ~~~~~~~l~~~g~d---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+.+++.+++++| | +|+++.|.|..| ...+...|.+++.++. ++.+|++++++++++
T Consensus 73 l~~al~al~~~G-d~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~ 147 (363)
T TIGR01437 73 IAQSVAAVITRG-NRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITE 147 (363)
T ss_pred HHHHHHHHhcCC-CcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcCh
Confidence 999999999998 8 999999888766 5677889999998875 245899999999999
Q ss_pred CccEEE-EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 184 NTAAIV-IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 184 ~~~~i~-i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
++++++ +++|+||+|...+ +++|.++|++||+++|+|++|+. ....+..+. ..+++.|+||.+ .|
T Consensus 148 ~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~------~~~~~~~~g---~D~~~~S~~K~l--~g 213 (363)
T TIGR01437 148 KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE------DLQKYYRLG---ADLVIYSGAKAI--EG 213 (363)
T ss_pred hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC------chHHHHHcC---CCEEEEeCCccc--CC
Confidence 999776 5678999999999 78899999999999999999972 111111121 238889999974 57
Q ss_pred ceeeEEEee
Q 021547 263 WRFGWLATN 271 (311)
Q Consensus 263 ~r~G~i~~~ 271 (311)
++.|+++.+
T Consensus 214 p~~G~l~~~ 222 (363)
T TIGR01437 214 PTSGLVLGK 222 (363)
T ss_pred CceEEEEEc
Confidence 789998863
No 172
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=5.8e-20 Score=168.21 Aligned_cols=212 Identities=15% Similarity=0.098 Sum_probs=152.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI 138 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V 138 (311)
++.++.+.+++..... .. ..|.. .++...|+++++++.. .+++++++|+++|+..++.+++++| |+|
T Consensus 35 ~~~~~~~~~~~~~~~~-~~-~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~G-D~V 103 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN-GE-MFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAG-DHL 103 (394)
T ss_pred cCCHHHHHHHhccCcc-CC-ceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEE
Confidence 4455555555432211 11 24655 3456799999998862 3578999999999999999999999 999
Q ss_pred EecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 139 LLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 139 l~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
++++|.|.++.. .++..|+++..++.. +.+.+++.+++++++|++++|+||||.+.+ +++|+++|+
T Consensus 104 vv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~ 173 (394)
T PRK09028 104 LMVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAH 173 (394)
T ss_pred EEECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHH
Confidence 999999987764 335577777766431 557899999999999999999999988755 999999999
Q ss_pred HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hcc
Q 021547 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGV 292 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~ 292 (311)
++|+++++|++|+... ...++. .+-.|++.|.+|+++.+| +..|+++ .++ ++.++++.. ...
T Consensus 174 ~~g~~lvvD~t~a~p~----~~~Pl~----~GaDivv~S~tK~l~Gh~d~~~G~~~-~~~-------~~~~~l~~~~~~~ 237 (394)
T PRK09028 174 EHDIVVMLDNTWASPI----NSRPFE----MGVDISIQAATKYIVGHSDVMLGTAT-ANE-------KHWDQLREHSYLM 237 (394)
T ss_pred HcCCEEEEECCccccc----cCCccc----cCceEEEEeCCeEecCCCCEEEEEEE-CCH-------HHHHHHHHHHHhc
Confidence 9999999999998522 122221 223499999999997774 6667654 332 245555543 224
Q ss_pred ccCCCchhHHHHHhhhh
Q 021547 293 RSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 293 ~~~~~~~~q~~~~~~l~ 309 (311)
..+.+++..+.+.+-|+
T Consensus 238 G~~~~p~~a~l~~rgl~ 254 (394)
T PRK09028 238 GQCTSPDDVYLAMRGLR 254 (394)
T ss_pred CCCCCHHHHHHHHcccC
Confidence 56778887776665543
No 173
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.86 E-value=4.8e-20 Score=171.40 Aligned_cols=247 Identities=21% Similarity=0.171 Sum_probs=166.7
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++..+|||..|.... .++ .+|.+.+++.+.+... ..|....+..+....+++.+.+.++. ..+++++++|+++
T Consensus 34 dG~~~id~~~~~~~~--~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVL--NLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhh--ccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHH
Confidence 588999999873321 133 7889999999998643 24444323455666666666665543 5689999999999
Q ss_pred HHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcC-------------cEEEEeeccCC----CCcccCHHHHHhhcC
Q 021547 122 AVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNH-------------IEVRHFDLLPE----RGWEVDLEAVEALAD 182 (311)
Q Consensus 122 a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~l~ 182 (311)
|+..+++.+. .++ ++|++.++.|.++........ .+++.++.... ..+..|++.|++.++
T Consensus 108 a~~~al~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 186 (413)
T cd00610 108 AVEAALKLARAYTGR-KKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALE 186 (413)
T ss_pred HHHHHHHHHHHHcCC-CeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHh
Confidence 9999999885 456 999999999988654433322 12344443210 124458889998876
Q ss_pred C--CccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547 183 E--NTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 183 ~--~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
. +...++++.| ++++|..+ +.+.+++|.++|++||+++|+||+|.++...+.. .....+....+ +.|+||.+
T Consensus 187 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~-~~~~~~~~~~d---~~t~sK~l 262 (413)
T cd00610 187 EHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM-FAFEHFGVEPD---IVTLGKGL 262 (413)
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hhHhhcCCCCC---eEEEcccc
Confidence 5 3344455555 67779876 6777999999999999999999999976444432 11222221222 34889998
Q ss_pred CCCcceeeEEEeeCCCCccchhhHHHHH--hhh-hccccCCCchhHHHHHhhhh
Q 021547 259 IVPGWRFGWLATNDPNGVLQKSGIVGSI--KAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+. |+|+||++++. ++++.+ ... ...+.+.++++|+++.+.|+
T Consensus 263 ~~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~ 307 (413)
T cd00610 263 GG-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLE 307 (413)
T ss_pred cC-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 76 89999998742 366764 333 23456788888888876653
No 174
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=1.4e-19 Score=167.93 Aligned_cols=232 Identities=14% Similarity=0.124 Sum_probs=161.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++++|+.++ |.++..+|++++++.++++..... .+....-..++++.+++++. .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 46899999998 457788999999999998743210 01111134567777777772 24556655
Q ss_pred ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547 118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~ 191 (311)
++++++..++.++.. +| |.|++....|..+...+...|.+++.++. .|++.+++.++ +++++++++
T Consensus 113 SG~~An~~ai~~l~~~~~g-~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~ 184 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPG-CVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFE 184 (406)
T ss_pred CcHHHHHHHHHHhhcCCCC-CEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEc
Confidence 566789999987765 67 88888888888888888888887766653 25666666553 356788899
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++|++|.+.+ +++|.++|+++|+++|+||+|+...++ |........+. ....|+++||||.|+++| ||++
T Consensus 185 ~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~G---G~~~ 257 (406)
T PRK13393 185 SVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMG---GYIT 257 (406)
T ss_pred CCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccC---ceee
Confidence 99999999999 999999999999999999999843333 22111111111 123588899999999988 9987
Q ss_pred eeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547 270 TNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~ 309 (311)
++. ++++.++.... ++.+.++.+++++.+.|+
T Consensus 258 ~~~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~ 292 (406)
T PRK13393 258 GSA--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVR 292 (406)
T ss_pred CCH--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHH
Confidence 642 36666665532 234556666776666554
No 175
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.85 E-value=7.6e-20 Score=169.51 Aligned_cols=239 Identities=18% Similarity=0.170 Sum_probs=158.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-..+.+. .+|.+.+++.+.+.... .+... ...+....+++.+.+.. ..+.++++++|++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~sGse 108 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNV-FTNEPALRLAKKLIDAT----FAERVFFANSGAE 108 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCchHH
Confidence 35788999987722222234 78999999999886421 11111 11122334455554422 2368999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCc------------EEEEeeccCCCCcccCHHHHHhhc
Q 021547 122 AVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHI------------EVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
|+..+++.... .+.++|+..+..|.+....+ ...+. +++.++. -|++.+++.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 181 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVI 181 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHh
Confidence 99999986632 23367888887777643322 21111 1122211 2789999988
Q ss_pred CCCccEEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC
Q 021547 182 DENTAAIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI 259 (311)
Q Consensus 182 ~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~ 259 (311)
.++++++++. |.||+|-.+ +.+.+++|.++|++||+++|+||+|.++.++|.. .+...+...+. +.||||.++
T Consensus 182 ~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd---i~s~sK~l~ 256 (403)
T PRK05093 182 DDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYMHYGVTPD---ILTSAKALG 256 (403)
T ss_pred cCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhhcCCCCC---EEEeccccc
Confidence 7777777777 777777654 8899999999999999999999999988777653 22222222222 459999987
Q ss_pred CCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 260 VPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+|+|+||++++. ++++.+... ...+++.+++.|+++.+.|+
T Consensus 257 -~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~ 298 (403)
T PRK05093 257 -GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFD 298 (403)
T ss_pred -CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 899999999864 477777653 44456789999999888553
No 176
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.85 E-value=3e-19 Score=164.49 Aligned_cols=228 Identities=15% Similarity=0.073 Sum_probs=158.4
Q ss_pred CCCcHHHHHHHHHHHhcCCC-----CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh----
Q 021547 61 FRTAAVAEDAIVDSVRSSMF-----NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---- 131 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~-----~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---- 131 (311)
.++++.+.+++.+.+..... +.|+ ..+...+++++++++.. .+. .++++|++|+|+++++..++.++.
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~ 85 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI 85 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence 45678899999887753211 1222 23556788888888753 221 257899999999999999998763
Q ss_pred -cCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547 132 -RLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 132 -~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
+++.++|++....|+.+.. .++..|.+++.++++ .++.+|++.+++.++++++++++++|+||||..++ ++
T Consensus 86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~ 160 (382)
T TIGR03403 86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK 160 (382)
T ss_pred ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence 4532789999877776543 456789999999875 34578999999999989999999999999999999 78
Q ss_pred HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH--HH
Q 021547 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV--GS 285 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~--~~ 285 (311)
+|.++|+++|+++++|+++... .-+..+... +..+++.|++|.+|.+| +|++.+.... .+. +.+. ..
T Consensus 161 ~I~~la~~~g~~~ivD~a~~~g----~~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~-p~~~g~~~ 229 (382)
T TIGR03403 161 EIGEICKERGVLFHTDAVQAIG----KIPVDVQKA---GVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELT-PLFHGGEH 229 (382)
T ss_pred HHHHHHHHcCCEEEEechhhcC----CCccCcccc---CCCEEEEcchhhCCCCc--eEEEEECCCC-CCC-CcccCCCC
Confidence 8999999999999999998742 111222221 22388899999887777 5777665432 111 1111 11
Q ss_pred HhhhhccccCCCchhHHHHHhhhh
Q 021547 286 IKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 286 ~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+... ..+.++.++++++++.++
T Consensus 230 ~~~~--~~gt~~~~~~~al~~al~ 251 (382)
T TIGR03403 230 MGGR--RSGTLNVPYIVAMGEAMR 251 (382)
T ss_pred CCCc--ccCCcChHHHHHHHHHHH
Confidence 1111 134567777766666553
No 177
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.85 E-value=1e-19 Score=167.72 Aligned_cols=228 Identities=13% Similarity=0.139 Sum_probs=156.0
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+||+..+ |.++..+|.+++++.++++. ... .|+...+..+|++++++++.. .+.+++++|.+
T Consensus 1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~ 69 (392)
T PLN03227 1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAS 69 (392)
T ss_pred CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHH
Confidence 4788887 45788999999999999864 222 377666889999999999942 24566666655
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-----------CCccEEE
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-----------ENTAAIV 189 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~~i~ 189 (311)
. ...++.+++++| |.|+++.+.|.++...+...+.+++.++..+. -+++.+.+.+. +++++|+
T Consensus 70 a-~~~~i~~l~~~G-D~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi 143 (392)
T PLN03227 70 T-TSSTVAAFAKRG-DLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLV 143 (392)
T ss_pred H-HHHHHHHhCCCC-CEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEE
Confidence 4 447777889999 99999999999998887888888777754211 12333332332 3577888
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC-CCccccc--C-CCCCeEEEecCcccCCCCccee
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-YIPMGVF--G-SIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~-~~~~~~~--~-~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
+.++.||+|.+.+ ++++.++|++||+++|+||+|+ +...|.. ......+ . ..+..|++.|+||.++..|
T Consensus 144 ~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g--- 216 (392)
T PLN03227 144 VEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG--- 216 (392)
T ss_pred EcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---
Confidence 8899999999999 8899999999999999999998 3322211 0111111 1 1233688999999876444
Q ss_pred eEEEeeCCCCccchhhHHHHHhhh-hc--cccCCCchhHHHHHhh
Q 021547 266 GWLATNDPNGVLQKSGIVGSIKAC-LG--VRSGPSTLIQVCEMFL 307 (311)
Q Consensus 266 G~i~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~q~~~~~~ 307 (311)
|+++++. ++++.++.. .. ++.+.+++.++++...
T Consensus 217 g~v~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~a 253 (392)
T PLN03227 217 GMTVGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATA 253 (392)
T ss_pred cEEecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHH
Confidence 8887642 356555433 22 2233346555555543
No 178
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=4.8e-19 Score=162.62 Aligned_cols=217 Identities=25% Similarity=0.279 Sum_probs=168.7
Q ss_pred hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC--CCCC----CCCcHHHHHHHHH
Q 021547 27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFN--CYAP----MFGLPLARRAVAE 98 (311)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~--~Y~~----~~g~~~lr~~ia~ 98 (311)
.+|+.+..+.+.. +.+++.|+.+. ..+.|..+.+++.+..... ..+ .|.. ..-+++.|+.+++
T Consensus 7 ~~r~~fp~l~~~~----~~~~vylD~aa-----~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~ 77 (405)
T COG0520 7 AVRADFPALKREV----GKPLVYLDNAA-----TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVAR 77 (405)
T ss_pred HHHhhCHHHhhcc----CCCeEEecCcc-----cccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHH
Confidence 3666666654442 56788888876 2346889999999876421 111 1211 1245678999999
Q ss_pred HHhhcCCCCCC-CCCEEEeCChHHHHHHHHHHH---hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCc
Q 021547 99 YLNRDLPYKLS-ADDIYITLGCMEAVEIILTVI---TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGW 170 (311)
Q Consensus 99 ~l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~ 170 (311)
+++. + .++|++|.|+|++++.+..++ ..+| |+|++....|++ +....+..|++++.+++. +++
T Consensus 78 ~~~a------~~~~eIvft~~tT~aln~va~~l~~~~~~g-deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g 148 (405)
T COG0520 78 FLNA------DSSDEIVFTRGTTEALNLVARGLGRSLKPG-DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDG 148 (405)
T ss_pred HhCC------CCCCeEEEeCChhHHHHHHHHHhhhhhcCC-CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCC
Confidence 9954 5 589999999999999999999 5899 999999999874 567777889999999976 566
Q ss_pred ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
.++++.++..++++|+++.+++.+|.||.+.| +++|+++|+++|+++++|.+++. ++-+..+..++. .++
T Consensus 149 ~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~---Df~ 218 (405)
T COG0520 149 LLDLDALEKLITPKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGC---DFL 218 (405)
T ss_pred CcCHHHHHHhcCCCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCC---CEE
Confidence 89999999999999999999999999999999 99999999999999999999986 333344444443 399
Q ss_pred EecCcccCCCCcceeeEEEeeC
Q 021547 251 LGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+.|.+|+++.| ..+|.+.+..
T Consensus 219 afsgHKwl~gP-~GiGvLy~r~ 239 (405)
T COG0520 219 AFSGHKWLLGP-TGIGVLYVRK 239 (405)
T ss_pred EEcccccccCC-CceEEEEEch
Confidence 99999965666 3467777653
No 179
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=1.9e-19 Score=164.82 Aligned_cols=195 Identities=17% Similarity=0.255 Sum_probs=147.0
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR 142 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~ 142 (311)
.+...+++.+.+.++.. +.. .++++.+.+++.+.+ ..+++++|+|+++++.+++.++ .++| |+|+++.
T Consensus 10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pG-d~Viv~~ 78 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPG-DEVIMPS 78 (376)
T ss_pred CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCc-CEEEECC
Confidence 45567888888876543 211 234555555555433 3468999999999999999888 7899 9999999
Q ss_pred CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
++|..+...+...|++++.+++++ +++.+|++.+++.+++++++|+ |+||+|...+ +++|.++|+++|++||+
T Consensus 79 ~t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIe 151 (376)
T TIGR02379 79 YTFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIE 151 (376)
T ss_pred CCcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEE
Confidence 999999999999999999999854 4578999999999998899886 5678999888 88999999999999999
Q ss_pred eccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547 223 DEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 223 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 291 (311)
|++|+... +++.+..++. .+.+.|| +|.+ .+|.+.|+++++++ ++.++++.+..
T Consensus 152 Daa~~~g~~~~~~~~g~~~-------~~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~ 208 (376)
T TIGR02379 152 DAAQGVMSTYKGRALGSIG-------HLGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIRE 208 (376)
T ss_pred ECccccCCccCCcccCCCC-------CEEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHH
Confidence 99998754 5554332221 1333343 3764 56778899998764 36777666543
No 180
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=1.3e-19 Score=167.70 Aligned_cols=193 Identities=15% Similarity=0.097 Sum_probs=145.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
...++.++++|.... . +|. ..+..++++.+.+.+.+.+|.+ ..+.+++++++++++..++..+.++| |+|++
T Consensus 18 ~~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~G-d~Vlv 89 (401)
T PLN02409 18 VNIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPG-DKVVS 89 (401)
T ss_pred CCCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCC-CEEEE
Confidence 356778888775432 1 222 3467888888888888877753 23467888999999999999999999 99999
Q ss_pred cCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 141 PRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 141 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
..+.|.+. ...++..|.+++.++... +..++++++++.+++ ++++++++++.||||.++|.+++.++++ |+
T Consensus 90 ~~~~~~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~ 166 (401)
T PLN02409 90 FRIGQFSLLWIDQMQRLNFDVDVVESPW--GQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CA 166 (401)
T ss_pred eCCCchhHHHHHHHHHcCCceEEEECCC--CCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hh
Confidence 99998765 467788999999998643 234789999998875 7899999999999999999555544444 99
Q ss_pred HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++|+++|+|++++. |..+..+..+ +..+++.|.+|++++|. ++||++++.
T Consensus 167 ~~g~~~vvD~v~s~----g~~~id~~~~---~~D~~~~s~~K~l~~P~-G~G~l~~~~ 216 (401)
T PLN02409 167 QHPALLLVDGVSSI----GALDFRMDEW---GVDVALTGSQKALSLPT-GLGIVCASP 216 (401)
T ss_pred ccCcEEEEEccccc----CCcccccccc---CccEEEEcCccccCcCC-CcceeEECH
Confidence 99999999999884 2222222222 22378888899986653 699999854
No 181
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=2e-19 Score=165.27 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP 143 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p 143 (311)
+.-.+++.+.+.++.. .+ .+...+|+++++++++ .+++++++|+++|+.+++.++ +++| |+|+++.+
T Consensus 14 ~~e~~~~~~~l~~~~~-~~--g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~G-d~Viv~~~ 81 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-TT--GPKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPG-DEVITPSL 81 (379)
T ss_pred HHHHHHHHHHHHcCCc-cC--CHhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCC-CEEEECCC
Confidence 5557788888776533 22 3468899999999994 246888999999999999999 7899 99999999
Q ss_pred CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+|..+...+...|++++.+++++ +++.+|++.+++.+++++++++ |.|++|...+ +++|.++|+++|++||+|
T Consensus 82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED 154 (379)
T ss_pred cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence 99999999999999999998753 4567899999999998899877 5567899887 889999999999999999
Q ss_pred ccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 224 EVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 224 ~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++|+. ..+.+... .. .+ +.+.||++...+++.+.|+++..++ ++.++++..
T Consensus 155 ~a~a~g~~~~~~~~---g~---~g--~~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~ 206 (379)
T PRK11658 155 AAHAVGTYYKGRHI---GA---RG--TAIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSL 206 (379)
T ss_pred CCCccCCeECCeec---CC---CC--CEEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHH
Confidence 99984 44444321 11 11 2345666555567778898887654 366666654
No 182
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=5.8e-20 Score=163.20 Aligned_cols=167 Identities=18% Similarity=0.147 Sum_probs=132.7
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 167 (311)
-+.++++.++++++. .+.+++++|+++++.+++.+++++| |+|+++.++|.++...+...|.+++.++....
T Consensus 60 ~i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~g-d~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGPG-DKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCCC-CEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 367889999998842 2344559999999999999999999 99999999999999999999999998876543
Q ss_pred CC----cccCHHHHHhhcC--CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCccc
Q 021547 168 RG----WEVDLEAVEALAD--ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMG 240 (311)
Q Consensus 168 ~~----~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~ 240 (311)
.+ ..+|++.+++.++ ++++++++++| |++|.+++ +++|+++|+++|+++|+|++|+. +.|.+..+...
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~- 206 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA- 206 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch-
Confidence 33 3689999999885 46889999998 78999998 89999999999999999999975 34433211111
Q ss_pred ccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
...+..+++.|++|+ ++|++.|+++..
T Consensus 207 --~~~~~div~~S~hK~--l~g~~~~~~l~~ 233 (294)
T cd00615 207 --AMAGADIVVQSTHKT--LPALTQGSMIHV 233 (294)
T ss_pred --hhcCCcEEEEchhcc--cchHhHHHHHHh
Confidence 123456999999997 578887665543
No 183
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.84 E-value=2.3e-19 Score=162.05 Aligned_cols=214 Identities=19% Similarity=0.190 Sum_probs=168.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++++++||+.+| |.++..+|.+++++.+.++.... .-++...-+.+|++.+|+|+ ..+..++.
T Consensus 37 ~~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f 105 (388)
T COG0156 37 DGRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLF 105 (388)
T ss_pred CCceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEE
Confidence 368899999999 56889999999999998874210 01334445678999999999 34567776
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEE
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVI 190 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i 190 (311)
+++-.|+..++.+|++++ |.|+...-.|.+....++..+.+.+.+.. .|++.||+.+++ +.+.|+.
T Consensus 106 ~SGy~AN~~~i~~l~~~~-dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivt 177 (388)
T COG0156 106 SSGFVANLGLLSALLKKG-DLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVT 177 (388)
T ss_pred cccchhHHHHHHHhcCCC-cEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEE
Confidence 777889999999999999 99999999999999999999999998865 388999998865 2455666
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc--cCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV--FGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~--~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
...-...|.+.| |++|++++++|+.++++||+|+.-+++....-.... +......|.++||||+||..| ||+
T Consensus 178 egVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v 251 (388)
T COG0156 178 EGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYI 251 (388)
T ss_pred eccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---cee
Confidence 677889999998 999999999999999999999987776332222222 233445799999999999999 999
Q ss_pred EeeCCCCccchhhHHHHHhhh
Q 021547 269 ATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~ 289 (311)
.++. .+++.++..
T Consensus 252 ~g~~--------~~~d~L~~~ 264 (388)
T COG0156 252 AGSA--------ALIDYLRNR 264 (388)
T ss_pred eCcH--------HHHHHHHHh
Confidence 8754 356665554
No 184
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.84 E-value=4e-19 Score=164.68 Aligned_cols=200 Identities=18% Similarity=0.142 Sum_probs=149.8
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY--AP------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+.|+.+.+ .+.++.+.+++.+.+........ .. ...+.++|+.+++++ +.++++|++|+|+
T Consensus 5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~ 73 (402)
T TIGR02006 5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA 73 (402)
T ss_pred EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence 67777763 36788999999887642211111 11 123456677788877 3467899999999
Q ss_pred HHHHHHHHHHHh----cCCCCEEEecCCCCcchHHH---HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 120 MEAVEIILTVIT----RLGAANILLPRPGWPFYESF---AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 120 ~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
++++..++.++. ++| |+|++..+.|..+... ++..|.+++.+++. .++.+|++.+++.++++++++++++
T Consensus 74 t~a~~~~l~~l~~~~~~~g-~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 74 TESNNLAIKGIAHFYKSKG-NHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHHHHhhcCCC-CEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence 999999887764 578 9999999999876543 34569999998764 4467899999999988999999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++||||...+ +++|.++|+++|+++++|++++... .+..+... +..+++.|.+|.+|.+| +|++++.+
T Consensus 151 ~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNEL---KVDLMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccc---CCCEEEEehhhhcCCCc--eEEEEEcc
Confidence 9999999998 8899999999999999999998521 22222222 23488899999876446 78887764
Q ss_pred C
Q 021547 273 P 273 (311)
Q Consensus 273 ~ 273 (311)
.
T Consensus 219 ~ 219 (402)
T TIGR02006 219 K 219 (402)
T ss_pred C
Confidence 3
No 185
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=1.8e-19 Score=164.58 Aligned_cols=191 Identities=18% Similarity=0.223 Sum_probs=141.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHc
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRN 155 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~ 155 (311)
+.+|+ .+...+|+++++++. . ++.++++++++++..++.+++++| |+|+++.|.|..+...+ +..
T Consensus 45 y~ry~-~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 45 YGRAS-NPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPG-DTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred eECCC-CccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHHHhcC
Confidence 33444 457899999999987 1 346666667789999999999999 99999999998876544 457
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
|++++.++.... .+ .+.++++++++++|+||+|.+.+ +++|+++|+++|+++|+|++|... + +..
T Consensus 114 G~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~-~-~~~ 178 (366)
T PRK07582 114 GVTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP-L-GQR 178 (366)
T ss_pred eEEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc-c-ccC
Confidence 888888875311 11 23357899999999999998877 999999999999999999999642 1 222
Q ss_pred CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++. +. ..++++|+||.++. +|+|+||++++++ +++++++.... ...+++++.++.+.+.|+
T Consensus 179 --p~~-~g---~Divv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 179 --PLE-LG---ADLVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred --chh-cC---CcEEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 221 21 22889999999855 6799999987543 36666665533 345677888777766654
No 186
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=5.2e-19 Score=164.29 Aligned_cols=160 Identities=19% Similarity=0.158 Sum_probs=132.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+....|++.++++. ..+..++++|+++|+.+++.+++++| |+|+++.+.|.+. ...++..|++++.+
T Consensus 64 p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~G-D~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v 134 (431)
T PRK08248 64 PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAG-DEIVSSSSLYGGTYNLFAHTLPKLGITVKFV 134 (431)
T ss_pred chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCC-CEEEEccCchhhHHHHHHHHHHhCCEEEEEE
Confidence 34677888888888 34678899999999999999999999 9999999988753 34567799999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .|++.+++.+++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..- ....++
T Consensus 135 d~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~----~~~~pl--- 197 (431)
T PRK08248 135 DP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP----YLLRPI--- 197 (431)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc----ccCChh---
Confidence 75 3889999999989999999999999999999 889999999999999999998731 111222
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
..+..+++.|++|.++.+|.++|++++...
T Consensus 198 -~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 198 -EHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred -HcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 123448999999999999999999888544
No 187
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=3.7e-19 Score=165.01 Aligned_cols=201 Identities=18% Similarity=0.199 Sum_probs=150.0
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCCC--------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVR--SSMFNCYA--------PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y~--------~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.|.|+.+.. .+.++.+.+++.+.+. ....+... ......++|+.++++++ .++++++++
T Consensus 4 ~iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~~v~~~ 72 (404)
T PRK14012 4 PIYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG------ADPREIVFT 72 (404)
T ss_pred eEEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcCeEEEe
Confidence 367777763 3678889999988774 21111110 01234566777877773 466789999
Q ss_pred CChHHHHHHHHHHHh----cCCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
+|+++++.+++.++. ++| |+|+++.++|+.+...+ +..|++++.++.+ .++.+|++.|++.+++++++++
T Consensus 73 ~g~t~al~~~l~~l~~~~~~~g-d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~~t~lv~ 149 (404)
T PRK14012 73 SGATESDNLAIKGAAHFYQKKG-KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRDDTILVS 149 (404)
T ss_pred CCHHHHHHHHHHHHHHhhcCCC-CEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEE
Confidence 999999999888774 688 99999999998764433 4469999998765 3567899999999999999999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++++||||..++ +++|.++|+++|+++|+|++++. |..+..+.... ..+++.|++|.++ |+ ++|+++
T Consensus 150 ~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~g-p~-g~G~l~ 217 (404)
T PRK14012 150 IMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLK---VDLMSFSAHKIYG-PK-GIGALY 217 (404)
T ss_pred EECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCC---CCEEEEehhhccC-CC-ceEEEE
Confidence 9999999999998 88999999999999999999985 21222222222 2378889999754 44 689988
Q ss_pred eeCC
Q 021547 270 TNDP 273 (311)
Q Consensus 270 ~~~~ 273 (311)
+++.
T Consensus 218 ~~~~ 221 (404)
T PRK14012 218 VRRK 221 (404)
T ss_pred EecC
Confidence 8754
No 188
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=3.8e-19 Score=164.31 Aligned_cols=154 Identities=18% Similarity=0.180 Sum_probs=124.1
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~ 162 (311)
+....|++.++++.. .+..++++++++|+.+++.+++++| |+||++.+.|.+.... +...|+++..+
T Consensus 61 Ptv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~G-D~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v 131 (432)
T PRK06702 61 PTLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSG-DHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF 131 (432)
T ss_pred cHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHHHHHCCCEEEEE
Confidence 356788899998883 3468889999999999999999999 9999999999866554 68899999888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .+|++.+++++++++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-.+ ..++
T Consensus 132 d~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----~~pl--- 195 (432)
T PRK06702 132 NP------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----CQAF--- 195 (432)
T ss_pred CC------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh----CChh---
Confidence 54 36889999999999999999999999999999 99999999999999999999863110 1111
Q ss_pred CCCCCeEEEecCcccCCCCcceee
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
..+-.|+++|+||.++.++--+|
T Consensus 196 -~~GADIvv~S~TKy~~Ghsd~l~ 218 (432)
T PRK06702 196 -EHGANIIVHSTTKYIDGHASSLG 218 (432)
T ss_pred -hcCCCEEEEccccccCCCcceec
Confidence 12233999999995544443333
No 189
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=5e-19 Score=162.26 Aligned_cols=187 Identities=20% Similarity=0.183 Sum_probs=138.2
Q ss_pred CCCCCC--CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHc
Q 021547 82 CYAPMF--GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRN 155 (311)
Q Consensus 82 ~Y~~~~--g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~ 155 (311)
.|.... ...++++.+++++ | .++++++++++.++.+++. ++++| |+|+++.+.|.++.. .++..
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll~~G-d~Vl~~~~~y~~~~~~~~~~~~~~ 109 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LLNNG-DEIIAGDDLYGGTDRLLTQVVPRS 109 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-HhCCC-CEEEEcCCCchHHHHHHHHHHHHc
Confidence 566431 2456666666665 2 2567777778889988776 77999 999999999987654 45668
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
|++++.++. .|++.+++.++++++++++++|+||+|.+.+ +++|+++|+++|+++|+|++|.... .
T Consensus 110 G~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~ 175 (378)
T TIGR01329 110 GVVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----L 175 (378)
T ss_pred CcEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----c
Confidence 999998875 2789999999999999999999999999998 9999999999999999999986422 1
Q ss_pred CCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHH
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVC 303 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 303 (311)
..++. + +-.++++|++|.++.+ +++.|++++.++ .+.++++.... .....+++..+.
T Consensus 176 ~~~l~-~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l 234 (378)
T TIGR01329 176 CNPLE-L---GADIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWL 234 (378)
T ss_pred CChhh-c---CCcEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHH
Confidence 22222 1 1239999999988765 478999987553 25566665543 334455554443
No 190
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=1.4e-18 Score=158.26 Aligned_cols=193 Identities=17% Similarity=0.150 Sum_probs=142.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCC--CCCCC------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc
Q 021547 61 FRTAAVAEDAIVDSVRSSMFN--CYAPM------FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR 132 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~--~Y~~~------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~ 132 (311)
.+.++.+++++.+.+...... ..... .-+.++|+.++++++ .++++|++|+|+++++..++.++..
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG------ADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 467889999998877431111 10111 114567778887773 4678999999999999999988863
Q ss_pred ----CCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547 133 ----LGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 133 ----~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~ 205 (311)
+|.+.|++....|+.+. ..++..|++++.++.. .++.+|++.+++.++++++++++++++||||.+++
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~--- 156 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP--- 156 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence 44367888877777553 3455679999998864 34678999999999888999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+++|.++|+++|+++|+|++++... ....+.. .+..+++.|.+|.++.+| +|++++++.
T Consensus 157 ~~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~~gp~g--~g~l~~~~~ 215 (353)
T TIGR03235 157 IREIAEVLEAHEAFFHVDAAQVVGK----ITVDLSA---DRIDLISCSGHKIYGPKG--IGALVIRKR 215 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhcCC----ccccccc---cCCCEEEeehhhcCCCCc--eEEEEEccC
Confidence 8999999999999999999988522 2222222 223388889999876555 888888654
No 191
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.83 E-value=1e-18 Score=160.79 Aligned_cols=191 Identities=20% Similarity=0.161 Sum_probs=140.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-- 131 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-- 131 (311)
.+.++.+.+++.+.+.....+.+... .-+.++|+.++++++ .++++|++|+|+++++..++.++.
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~t~~~t~a~~~al~~~~~~ 82 (379)
T TIGR03402 9 TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLG------AEPDEIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence 46678999999887753211111111 113456666666663 357889999999999999988774
Q ss_pred -cCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547 132 -RLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 132 -~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
.+| +.|++....|+.+.. .++..|.+++.++.. .++.+|.+.+++.++++++++++++++||||..+| ++
T Consensus 83 ~~~~-~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~ 156 (379)
T TIGR03402 83 QPEK-RHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE 156 (379)
T ss_pred cCCC-CeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence 356 899999988876643 344579999998764 34568999999999989999999999999999999 77
Q ss_pred HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+|.++|+++|+++++|++++. |..+..+.... -.+++.|.+|.++.+| +|++.+..
T Consensus 157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~v~~ 212 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMN---IDMLSLSGHKLHGPKG--VGALYIRK 212 (379)
T ss_pred HHHHHHHHcCCEEEEECcccc----cccccCcccCC---CCEEEEcHHHcCCCCc--eEEEEECC
Confidence 899999999999999999985 22223333222 2388889999766566 66766653
No 192
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.83 E-value=6.1e-19 Score=163.11 Aligned_cols=240 Identities=18% Similarity=0.088 Sum_probs=160.5
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.++||..|--... .--.+|.+.+++.++++..... .+.......+|.+.++++. ..+.++++++|+
T Consensus 37 ~~G~~~lD~~~g~~~~~-lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs 107 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVN-QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGA 107 (396)
T ss_pred CCCCEEEEcCCCHHhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChH
Confidence 35888899876632111 1236789999999988743211 1111112234444444432 236899999999
Q ss_pred HHHHHHHHHHhc---------CCCCEEEecCCCCcchH-HHHHHcCcE------------EEEeeccCCCCcccCHHHHH
Q 021547 121 EAVEIILTVITR---------LGAANILLPRPGWPFYE-SFAKRNHIE------------VRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 121 ~a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~ 178 (311)
+|++.+++.... +|+++|+.....|.+.. ......+.. +..++. .|++.++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 180 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK 180 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence 999998887742 34467888877776543 333222211 111211 2788999
Q ss_pred hhcCCCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547 179 ALADENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257 (311)
Q Consensus 179 ~~l~~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 257 (311)
+.++++++++++..++||+|..++++ .+++|.++|++||+++|+||+|.++.+.|..+ .........++ .++||.
T Consensus 181 ~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~pdi---~~~sK~ 256 (396)
T PRK04073 181 AAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPDM---YILGKA 256 (396)
T ss_pred HhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-HhhhcCCCCCE---EEeccc
Confidence 98888888888888899999998765 69999999999999999999999876655322 11222222233 368999
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++|+|+||++++. ++++.+... ...++++++++|+++.+.|+
T Consensus 257 lg~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 257 LGGGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALE 301 (396)
T ss_pred ccCCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999853 467766543 33456789999999888875
No 193
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=1e-18 Score=159.89 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=139.3
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 163 (311)
....|++.++++. ..+++++++|+++|+..++.+++++| |+|+++++.|.+.... .+..|+++..++
T Consensus 51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~G-D~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d 121 (377)
T TIGR01324 51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAG-DHVLMVDSAYEPTRYFCDIVLKRMGVDITYYD 121 (377)
T ss_pred cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCC-CEEEEcCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence 3468999999888 34689999999999999999999999 9999999999876543 456788877764
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.. +.+.+++.+++++++|++.+|+||+|...+ +++|+++|+++|+++|+|++|+.-... .++
T Consensus 122 ~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~----~pl---- 183 (377)
T TIGR01324 122 PL-------IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF----KPL---- 183 (377)
T ss_pred CC-------CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc----Ccc----
Confidence 31 237899999999999999999999988765 999999999999999999999863221 122
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
..+..|+++|++|.++.++ ...|++++++ +.+++++.. ...+...++...+.+.+.+
T Consensus 184 ~~gaDivv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl 242 (377)
T TIGR01324 184 EHGVDISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGL 242 (377)
T ss_pred ccCceEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhh
Confidence 1223499999999998664 6788877643 244544433 2334455666555544433
No 194
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.83 E-value=4.5e-19 Score=165.41 Aligned_cols=243 Identities=15% Similarity=0.092 Sum_probs=166.3
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.++||..|..... .-..+|.+.+++.+++.... .|. +..+..+|++++++++.. .++|++++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGs 114 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGT 114 (423)
T ss_pred CCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHH
Confidence 35889999988854321 12467999999999987543 343 556788999999988732 26899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCC-------CCc---ccCHHHHHhhcC---C
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPE-------RGW---EVDLEAVEALAD---E 183 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~d~~~l~~~l~---~ 183 (311)
+|++.+++.... .|.++|+...++|.++...+.. .+......+..+. ... ..|++.+++.+. +
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 999998886543 2338999999999987543332 1111000010000 000 027888888775 4
Q ss_pred CccEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 184 NTAAIVII-NPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 184 ~~~~i~i~-~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
+++++++. .++| +|.+.+ ++.+++|.++|++||+++|+||+|.++.++ ... ....+...+++ .+|||.++ +
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~~~-~~~~~~~~pDi---~t~sK~l~-~ 267 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-LGG-AQEYFGVEPDL---TTLGKIIG-G 267 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-cch-hHHHhCCCcch---hhhhhhhc-C
Confidence 66777775 5667 788877 688999999999999999999999887543 211 11112222232 37999987 8
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+|+||++++. ++++.+.. . ...+++.++++|+++.+.|+
T Consensus 268 G~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 268 GLPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred CCceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence 99999999853 47777753 2 23456889999999877765
No 195
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.82 E-value=2.5e-18 Score=157.56 Aligned_cols=202 Identities=21% Similarity=0.164 Sum_probs=145.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc----CCCC
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR----LGAA 136 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~----~g~d 136 (311)
.++.|.+.+++.+.+....... ....+..++.+.+.+++.+.+| ...+++++++|+++++..++.++.. ++ +
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~-~ 105 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDP-GLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK-P 105 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCc-ccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC-c
Confidence 4567888899988876421111 1012344444445555554444 3455788999999999998887754 46 8
Q ss_pred EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 137 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
+|++..+.|..+...++..|.+++.++.. .++.+|++.|++.++++++.+++++++|+||...+ +++|.++|+++
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~ 180 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN 180 (371)
T ss_pred eEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc
Confidence 99999999999999999999999998764 35578999999999888888888888999999998 99999999999
Q ss_pred CCEEEEeccccCCccC-CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 217 GILVIADEVYGHLAFG-STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
|+++++|++|+.+... ......+ .+...+-..+..|.+|. +++|.++|++++.++
T Consensus 181 g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 181 GIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE 236 (371)
T ss_pred CCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH
Confidence 9999999999865421 0111011 11111122555688895 778899999887653
No 196
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=1.2e-18 Score=158.72 Aligned_cols=194 Identities=20% Similarity=0.144 Sum_probs=140.8
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~ 161 (311)
+|+. +...+|+++++++. ..+++++++|+++|+.+++. ++++| |+|+++.+.|......+....... .
T Consensus 50 R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~G-D~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 50 RTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVG-SKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCC-CEEEEecCCcCchHHHHHHHHhcC-c
Confidence 3443 46789999999998 45789999999999999985 56899 999999999976554433221110 0
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
+.. .+..|++.+++.+++++++|++++|+||+|...+ +++|+++|+++|+++|+|++|..-.+ .. ++..
T Consensus 118 ~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~-~~---pl~~ 186 (364)
T PRK07269 118 FHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY-QR---PIEL 186 (364)
T ss_pred EEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chhh
Confidence 111 1235889999999999999999999999999887 99999999999999999999864222 11 2221
Q ss_pred cCCCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+-.|+++|++|.++.+|- =.|+|++.++ ++.++++.... .+...+++..+.+..-|+
T Consensus 187 ----gaDivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~ 245 (364)
T PRK07269 187 ----GADIVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYLLMRGLK 245 (364)
T ss_pred ----CCcEEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 123999999999887653 4577776553 36666665442 345667877776665554
No 197
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.82 E-value=1.9e-19 Score=163.44 Aligned_cols=198 Identities=16% Similarity=0.038 Sum_probs=150.9
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----------
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR----------- 132 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~----------- 132 (311)
+..+.+.+...+..+. ..|....+..++++++++++.+.+|.+...+++++|+|+++++..++.+++.
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 3445555555544333 3588888999999999999999888764556899999999999999988853
Q ss_pred -CC-CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHH
Q 021547 133 -LG-AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 133 -~g-~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~ 204 (311)
++ .+.|+++.++|..+...++..|.+++.++.++ ++.+|++.|++.+++ +++++++++++||||...+
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~-- 166 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP-- 166 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC--
Confidence 22 14788999999999888888899999998753 347999999998876 7788899999999999877
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+++|.++|+++|+++++|++|+.+.+....... ...+ ..-..+..|++|+ +.++.++|++++
T Consensus 167 -~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~-l~~p~g~g~~~~ 229 (345)
T cd06450 167 -LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGI--ERVDSISVDPHKY-GLVPLGCSAVLV 229 (345)
T ss_pred -HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCc--cccCEEEEchhHh-hCCCcchHHHHH
Confidence 999999999999999999999876542111111 0111 1123567799996 456678888754
No 198
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=1.1e-18 Score=141.65 Aligned_cols=166 Identities=19% Similarity=0.102 Sum_probs=131.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH-HHHHHcCcEEEEeeccCC
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-SFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~ 167 (311)
+.++++.++++++ .+.+++++++|+++++.+++.++..++ ++|+++.+.|.+.. ..++..|.++..++....
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPG-DEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCC-CEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence 3578889998884 466789999999999999999998888 99999999999988 888999999999987544
Q ss_pred CCcccCHHHHHhh-cCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 168 RGWEVDLEAVEAL-ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 168 ~~~~~d~~~l~~~-l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
.....+.+.+++. ..++++++++++++|++|...+ +++|.++|+++|+++|+|++|..+...... .. ....+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~ 147 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGG 147 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-cc---ccccc
Confidence 3333333355443 3568889999999999999998 588999999999999999999986654211 01 11223
Q ss_pred CeEEEecCcccCCCCcceeeEEEe
Q 021547 247 PVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
..+++.|++|.|+. .++|++++
T Consensus 148 ~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 148 ADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CCEEEEEcccccCC--CceEEEEe
Confidence 45888999999765 78999876
No 199
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.82 E-value=1.2e-18 Score=155.88 Aligned_cols=204 Identities=19% Similarity=0.204 Sum_probs=167.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.+.+.+.++.+. ..|.++.|.++|...+.. ++...|. ...+.++.|+.||++++. ++++|++|
T Consensus 40 ~~~~~vyld~~a-----t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInA------d~~dIiFt 108 (428)
T KOG1549|consen 40 HGTRPVYLDNQA-----TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINA------DPSDIVFT 108 (428)
T ss_pred CCCccEEEecCc-----CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCC------CCCcEEEe
Confidence 466788888887 357889999999987652 2222233 334578899999999964 77779999
Q ss_pred CChHHHHHHHHHHHhc-CCCC----EEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547 117 LGCMEAVEIILTVITR-LGAA----NILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~-~g~d----~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i 188 (311)
+|+|+++++++..+.. .+ | .|++.+..|+... ...+..|++++.+|+. +++..|.+.+++.++++|+++
T Consensus 109 s~ATEs~Nlvl~~v~~~~~-~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv 185 (428)
T KOG1549|consen 109 SGATESNNLVLKGVARFFG-DKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV 185 (428)
T ss_pred CCchHHHHHHHHHhhcccc-ccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence 9999999999999864 34 5 8998888888654 4667788999999876 556789999999999999999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
.+.+.+|.+|+.+| +++|+++|+++++.+++|.+++- |+-...+..++.+ +...|.+|+||.+| +|++
T Consensus 186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL 253 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL 253 (428)
T ss_pred EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence 99999999999999 99999999999999999999996 5555566655544 78889999999999 8888
Q ss_pred EeeC
Q 021547 269 ATND 272 (311)
Q Consensus 269 ~~~~ 272 (311)
.+..
T Consensus 254 Yvr~ 257 (428)
T KOG1549|consen 254 YVRR 257 (428)
T ss_pred EEcc
Confidence 8763
No 200
>PRK05939 hypothetical protein; Provisional
Probab=99.82 E-value=1.8e-18 Score=159.23 Aligned_cols=156 Identities=18% Similarity=0.197 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccC
Q 021547 90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLP 166 (311)
Q Consensus 90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~ 166 (311)
..|++.++++.. .+..++++++++|+..++.+++++| |+|+++.+.|..+. ..++..|++++.++.
T Consensus 50 ~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~G-d~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-- 118 (397)
T PRK05939 50 AALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAG-DHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-- 118 (397)
T ss_pred HHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCC-CEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence 488888888873 3345666666999999999999999 99999999997543 356778999988875
Q ss_pred CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
.|++++++.++++++++++++|+||+|.+.+ +++|+++|+++|+++|+|++|+... ...+. ..+
T Consensus 119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~~----~~g 182 (397)
T PRK05939 119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRPK----DVG 182 (397)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCcc----ccC
Confidence 2789999999999999999999999999865 9999999999999999999987421 11111 123
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeC
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
..+++.|+||.++.+|.++|++++.+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecC
Confidence 45999999999999999999988753
No 201
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.4e-18 Score=159.75 Aligned_cols=160 Identities=23% Similarity=0.233 Sum_probs=127.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH----cCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR----NHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~ 162 (311)
+...+|++.++++.. .+..+++++|++|+.+++.+++++| |+|+++.+.|.+....+.. .|+++..+
T Consensus 58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~G-d~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~ 128 (425)
T PRK06084 58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAG-DNIVSVAKLYGGTYNLLAHTLPRIGIETRFA 128 (425)
T ss_pred chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCC-CEEEEeCCCcchHHHHHHHhcccceeEEEEE
Confidence 456788888888873 3456788888999999999999999 9999999999855444332 45566555
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .|++.+++.+++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+.... ..++. +
T Consensus 129 d~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~~-~ 193 (425)
T PRK06084 129 AH-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPFE-H 193 (425)
T ss_pred CC-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChhh-c
Confidence 42 3889999999889999999999999999999 89999999999999999999985321 11221 1
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+..|++.|++|.++.+|.++|.+++.+.
T Consensus 194 ---gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 194 ---GADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred ---CCCEEEECchhcccccccceeEEEEeCC
Confidence 2339999999999999999999888543
No 202
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.82 E-value=1.6e-18 Score=157.75 Aligned_cols=190 Identities=16% Similarity=0.137 Sum_probs=134.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
..+++.+++++....... ...|. .-..++|+.++++++ .+-+...|++++|+++++..++..++.++ |+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~la~~~~----~~~~~~~i~~~~~gt~~l~~~~~~~~~~~-~~vi~ 79 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCHW-DSEFN--DVTDQVRDRLLALAG----GDDNHTCVLLQGSGTFAVEATIGSLVPRD-GKLLV 79 (355)
T ss_pred CCCCHHHHHHhhhhccCC-CHHHH--HHHHHHHHHHHHHhc----CCCCCcEEEEeCCcHHHHHHHHHhccCCC-CeEEE
Confidence 456788888887633211 01122 234556666666663 23222368889999999999999998888 87776
Q ss_pred cCCC-Ccc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 141 PRPG-WPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 141 ~~p~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
..+. |.. +...++..|.+++.++.. .++.+|.+.+++.+++ +.+.+++++++||||...+ +++|+++|++|
T Consensus 80 ~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~ 154 (355)
T TIGR03301 80 LINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH 154 (355)
T ss_pred ECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc
Confidence 5554 443 456788899999998764 3467899999998864 4567778889999999988 89999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~ 272 (311)
|+++|+|++++.. .. ...+..+ +..+++.|++|++ +.+| +||++++.
T Consensus 155 ~~~livD~~~s~g---~~-~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~ 202 (355)
T TIGR03301 155 GAVLIVDAMSSFG---AI-PIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR 202 (355)
T ss_pred CCEEEEEeccccC---Cc-ccchhhc---CccEEEecCCcccccCCc--eeEEEECH
Confidence 9999999887642 21 2223322 3348899999985 4456 69999864
No 203
>PLN02651 cysteine desulfurase
Probab=99.82 E-value=4.6e-18 Score=155.59 Aligned_cols=199 Identities=17% Similarity=0.112 Sum_probs=144.2
Q ss_pred ecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------C--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 49 PLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA------P--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 49 ~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.|+.+.+ .+.++.+.+++.+.+.....+... . ..-+.++|+.++++++ .++++|++|+|++
T Consensus 2 Yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~t~~~t 70 (364)
T PLN02651 2 YLDMQAT-----TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG------ADPKEIIFTSGAT 70 (364)
T ss_pred cccCcCC-----CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHH
Confidence 4555553 357788999998876432111110 0 1113456666776663 4567999999999
Q ss_pred HHHHHHHHHH----hcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 121 EAVEIILTVI----TRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 121 ~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
++++.++..+ .++| |+|++....|+.+.. .++..|.+++.++.. .++.+|++++++.+++++++++++++
T Consensus 71 ~a~~~~l~~~~~~~~~~g-~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~ 147 (364)
T PLN02651 71 ESNNLAIKGVMHFYKDKK-KHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAV 147 (364)
T ss_pred HHHHHHHHHHHHhccCCC-CEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECC
Confidence 9988877665 3678 999999988876543 334578888888764 34678999999999999999999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+|+||...| +++|.++|+++|+++++|.+++.. .-+..+..++ ..+++.|.+|. +.| ..+|++++.++
T Consensus 148 ~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g----~~~~~~~~~~---~D~~~~s~hK~-~gp-~G~g~l~v~~~ 215 (364)
T PLN02651 148 NNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVG----KIPVDVDDLG---VDLMSISGHKI-YGP-KGVGALYVRRR 215 (364)
T ss_pred CCCceeccc---HHHHHHHHHHcCCEEEEEcchhhC----CcccCcccCC---CCEEEechhhh-CCC-CceEEEEEcCC
Confidence 999999999 889999999999999999999852 1222233322 34899999996 433 45888887653
No 204
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.81 E-value=2.8e-18 Score=157.22 Aligned_cols=190 Identities=18% Similarity=0.156 Sum_probs=138.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
.++++.++++|...+.. ....|. ....++|+.++++++ .+-..+.+++++|++.++..++.++..+| |.|++
T Consensus 14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~-~~vlv 85 (368)
T PRK13479 14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRD-GKVLV 85 (368)
T ss_pred CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCC-CeEEE
Confidence 45678888887665421 111122 245567777777663 22223568899999999999999999999 99999
Q ss_pred cCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 141 PRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 141 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
..++|.+. ...++..|.+++.++.. .++.+|++++++.+++ +++++++++|+||||...| +++|.++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~ 160 (368)
T PRK13479 86 PDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH 160 (368)
T ss_pred EeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc
Confidence 88887665 47788899999999864 3456899999998754 4668899999999999999 88999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~ 272 (311)
|+++|+|+++.. +. ....+..++ ..+++.|++|.+ +.+| +||++++.
T Consensus 161 ~~~livDa~~~~---g~-~~~~~~~~~---~d~~v~s~~K~l~g~~G--~G~l~~~~ 208 (368)
T PRK13479 161 GKRLIVDAMSSF---GA-IPIDIAELG---IDALISSANKCIEGVPG--FGFVIARR 208 (368)
T ss_pred CCEEEEEccccc---CC-ccccccccC---ceEEEecCccccccCCC--ceEEEECH
Confidence 999999966543 22 223333322 237788999975 5677 69999864
No 205
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.81 E-value=4.7e-18 Score=156.01 Aligned_cols=191 Identities=19% Similarity=0.289 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP 143 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p 143 (311)
+.-.+++.+.+.++.. |+ ..++++++++++.+.+| .+++++++|+++|+.+++.++ +++| |+|+++.+
T Consensus 11 ~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~G-d~Viv~~~ 79 (375)
T PRK11706 11 GTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPG-DEVIMPSY 79 (375)
T ss_pred HHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCC-CEEEECCC
Confidence 4446777777765432 32 23456666666655433 368999999999999887766 6899 99999999
Q ss_pred CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+|..+...+...|++++.+++++ +++.+|++++++.++++++++++++ ++|...+ +++|.++|+++|++||+|
T Consensus 80 t~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~~~i~vIeD 152 (375)
T PRK11706 80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKKHNLFVVED 152 (375)
T ss_pred CcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHHcCCEEEEE
Confidence 99999999999999999998754 4578999999999988999988764 6898776 889999999999999999
Q ss_pred ccccCCc-cCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 224 EVYGHLA-FGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 224 ~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++|+... +++.+. ..+. .+.+.||+ |.++ +|.+.++++ .++ ++.++++..
T Consensus 153 ~a~a~g~~~~~~~~---g~~~----~~~~~Sf~~~K~l~-~g~gG~~~~-~~~-------~~~~~~~~~ 205 (375)
T PRK11706 153 AAQGVMSTYKGRAL---GTIG----HIGCFSFHETKNYT-AGEGGALLI-NDP-------ALIERAEII 205 (375)
T ss_pred CccccccccCCeee---ecCc----CEEEEeCCCCcccc-ccCCeEEEE-CCH-------HHHHHHHHH
Confidence 9999765 444332 2221 14455655 9974 487766665 332 356655544
No 206
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.81 E-value=2e-18 Score=160.10 Aligned_cols=244 Identities=17% Similarity=0.159 Sum_probs=160.3
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.++..++||..|--..+.+.. +|.+.+++.+++.... ...|.. ....++.+.++++. ..+.+++++++
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sG 105 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG 105 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCc
Confidence 357889999876222223344 8899999999986321 111211 12234444444432 23689999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcEEEE----eeccC--CCCcccCHHHHHhhcCCCcc
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIEVRH----FDLLP--ERGWEVDLEAVEALADENTA 186 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~--~~~~~~d~~~l~~~l~~~~~ 186 (311)
++|++.+++.... +++.+|+.....|.+....+...+..... .++.+ ......|++.+++.+.+++.
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a 185 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC 185 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence 9999999988632 23378999899898765433332211100 00000 00012378899998877766
Q ss_pred EEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 187 AIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 187 ~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
++++ .|.+++|-++ +.+.+++|.++|++||+++|+||+|.++.+.|.. .....+...++ +.++||.++ +|+|
T Consensus 186 avii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD---i~t~sK~l~-gG~~ 259 (406)
T PRK12381 186 AVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL-YAYMHYGVTPD---VLTTAKALG-GGFP 259 (406)
T ss_pred EEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch-hhhHhhCCCCC---EEEehhhhh-CCCc
Confidence 6666 6888887654 7899999999999999999999999887666643 22222222222 359999986 7999
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+||++++. ++++.+... ...+++.+++.|+++.+.|+
T Consensus 260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~ 297 (406)
T PRK12381 260 IGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_pred eEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999853 477777653 33456789999999888553
No 207
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.81 E-value=2.3e-18 Score=159.62 Aligned_cols=239 Identities=17% Similarity=0.069 Sum_probs=159.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++++++||..|.-.. +.--.+|.+.+++.++++..... .+.......++.+.++++. + .+.+++++++++
T Consensus 39 ~g~~~lD~~~~~~~~-~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAV-NQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhc-cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHH
Confidence 478889987763211 11124788999999998753221 1112223445666666554 2 358999999999
Q ss_pred HHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHh
Q 021547 122 AVEIILTVITR---------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
|++.++..+.. +|.++|++....|.+....+...+. ++..++ ..|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 99999998853 2436788887777664333322221 122221 137899999
Q ss_pred hcCCCccEEEEeCCCCCCccCCCH-HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547 180 LADENTAAIVIINPCNPCGNVLTY-QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 180 ~l~~~~~~i~i~~p~nptG~~~~~-~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
.+.+++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|.++.+.|..+ .........+++ + ++|.+
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D~~-~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEADVT-L--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCCEE-E--ecccc
Confidence 998899999999999999999974 459999999999999999999998766554311 111111122223 3 36998
Q ss_pred CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+...+|+||++++. ++++.+... ...+++.+++.|+++.+.|+
T Consensus 259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 302 (401)
T PRK00854 259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALK 302 (401)
T ss_pred cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 76558999999854 356666533 33355679999998888774
No 208
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=3.4e-18 Score=156.69 Aligned_cols=184 Identities=20% Similarity=0.205 Sum_probs=133.0
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hH---HHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YE---SFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~---~~~~~~g~~~~~~ 162 (311)
+...+|++.++++.+ .+..+++++++.++.+++ .++++| |+|+++.|.|.+ |. ..++..|++++.+
T Consensus 50 p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~G-d~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v 119 (377)
T PRK07671 50 PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSG-DHVILTDDVYGGTYRVMTKVLNRFGIEHTFV 119 (377)
T ss_pred hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCC-CEEEECCCccchHHHHHHHHHhcCCeEEEEE
Confidence 346788888888883 223455555577887765 467899 999999999984 33 2445578888888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .|++.+++++++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+...+. . ++. +
T Consensus 120 ~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~~-~ 184 (377)
T PRK07671 120 DT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PIS-L 184 (377)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-C---hhh-h
Confidence 63 3889999999999999999999999999987 999999999999999999999753322 1 111 1
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHHH
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCEM 305 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~ 305 (311)
+..|++.|+||.++.++ .-.|++++.++ +++++++..+.. ....++...+.+.
T Consensus 185 ---g~Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~~g~~~~~~~a~l~~ 239 (377)
T PRK07671 185 ---GADIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNSTGGILGPQDSWLLL 239 (377)
T ss_pred ---CCeEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 22499999999998765 34566666543 366666665432 3445555444443
No 209
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=4.1e-18 Score=156.90 Aligned_cols=180 Identities=16% Similarity=0.129 Sum_probs=132.8
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 163 (311)
...++++.++++++. . +.++ +++|+.++.+++. ++++| |+|+++.+.|.+.. ..++..|++++.++
T Consensus 55 ~~~~le~~lA~l~g~------~-~~v~-~~sG~~ai~~~l~-~l~~G-d~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 55 TREALEDIIAELEGG------T-KGFA-FASGMAAISTAFL-LLSKG-DHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred hHHHHHHHHHHHhCC------C-CeEE-ECCHHHHHHHHHH-HhCCC-CEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 467888899888842 2 3444 4555778888886 67899 99999999997432 45667899999887
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.. |++.+++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ .+
T Consensus 125 ~~-------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~- 188 (390)
T PRK08064 125 MT-------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL- 188 (390)
T ss_pred CC-------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh-
Confidence 52 789999999999999999999999999988 889999999999999999999863321 111 11
Q ss_pred CCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHH
Q 021547 244 SIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQV 302 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 302 (311)
+..+++.|+||.++.+ |...|++++.++ +++++++.... .....++...+
T Consensus 189 --g~Divv~S~tK~~~G~~~~laG~~v~~~~-------~~~~~l~~~~~~~g~~~~~~~a~ 240 (390)
T PRK08064 189 --GADVVLHSATKFLAGHSDVLAGLAVVKDE-------ELAQKLYFLQNSFGAVLGVQDCW 240 (390)
T ss_pred --CCcEEEeecceeccCCccceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHH
Confidence 2348999999998754 456788776543 36777776644 23333444333
No 210
>PRK07505 hypothetical protein; Provisional
Probab=99.80 E-value=1.5e-17 Score=154.07 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=148.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAP-----MFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
+++.++||+.+++ .++..+|++.+++.++++... ...+.. .....++++.+++++ + . +.+++
T Consensus 44 ~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~---~~~~~ 111 (402)
T PRK07505 44 DGHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A---SVLTF 111 (402)
T ss_pred CCceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C---CEEEE
Confidence 4788999987652 344778999999999987421 111111 122345566666555 2 2 44544
Q ss_pred CChHHHHHHHHHHHh----cCCCCEEEecCCCCcc-hH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPF-YE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
++++++...++..+. .+|...|++.+..|.+ +. ......+.+++.++. .|++.+++.+++++++++
T Consensus 112 ~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~v 184 (402)
T PRK07505 112 TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAY 184 (402)
T ss_pred CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEE
Confidence 455667777765543 2232346565544433 21 112223456666654 388999998877789999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccC--CCCCeEEEecCcccCCCCccee
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFG--SIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
+++|+||+|.+++ +++|.++|+++|+++|+||+|+...++ |... ....+. ..+++|+++|+||.|+.+|
T Consensus 185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~-~~~~~~~~~~d~~i~~~s~sK~~~~~G--- 257 (402)
T PRK07505 185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGY-VRSELDYRLNERTIIAASLGKAFGASG--- 257 (402)
T ss_pred EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHHHcCCCCCCCeEEEEechhhhhccC---
Confidence 9999999999999 888889999999999999999654443 2221 112222 2456899999999999887
Q ss_pred eEEEeeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547 266 GWLATNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 266 G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~ 309 (311)
||++++++ ++++.+..... ++.++++++++++.+.++
T Consensus 258 g~~~~~~~-------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 258 GVIMLGDA-------EQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred eEEEeCCH-------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 88876443 36676665433 222345566666655543
No 211
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=9.1e-18 Score=154.54 Aligned_cols=186 Identities=19% Similarity=0.130 Sum_probs=136.0
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 163 (311)
...+|++.++++++. +..+++++++.|+.+++.+++++| |+|+++.+.|.+. ...++..|++++.++
T Consensus 64 ~~~~le~~lA~l~g~--------~~av~~~sG~~Ai~~al~al~~~G-d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd 134 (389)
T PRK05968 64 TVRAFEEMLAKLEGA--------EDARGFASGMAAISSTVLSFVEPG-DRIVAVRHVYPDAFRLFETILKRMGVEVDYVD 134 (389)
T ss_pred hHHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCceEEEeC
Confidence 467899999998842 345556677889999999999999 9999999999863 356677899998886
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
. .|++.+++.+ ++++++++++|+|+++ +..++++|.++|+++|+++|+|++|+...+.. + +. +
T Consensus 135 ~-------~d~~~l~~~i-~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p---~~-~- 197 (389)
T PRK05968 135 G-------RDEEAVAKAL-PGAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQR-P---IT-L- 197 (389)
T ss_pred C-------CCHHHHHHhc-ccCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccC-c---hh-c-
Confidence 4 2788998887 5789999987777664 55669999999999999999999998644321 1 11 1
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh--ccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL--GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~ 309 (311)
+..+++.|+||.++.+| .+.|+++.+. +++++++... ......+++.++.+...|+
T Consensus 198 --g~Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~ 256 (389)
T PRK05968 198 --GVDLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLR 256 (389)
T ss_pred --CCcEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccC
Confidence 12388899999998876 5788877532 3566665432 1234566676666555443
No 212
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.80 E-value=4.2e-17 Score=149.67 Aligned_cols=195 Identities=21% Similarity=0.191 Sum_probs=135.7
Q ss_pred cHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh------cCCC
Q 021547 64 AAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT------RLGA 135 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~------~~g~ 135 (311)
.+.+.+++....... ....|+ +..++.+.+.+.+.+.+| ++.+++++++|+++++..++.++. .+|
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g- 106 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT- 106 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC-
Confidence 355566666664421 111132 333333344444443333 356678899999999988877764 367
Q ss_pred CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 136 ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 136 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
|+|+++.++|..+...++..|++++.++.. .++.+|++++++.+++++..+++..|+||||...+ +++|.++|++
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~ 181 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE 181 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence 899999999999999999999999999864 45678999999998877766666668999999988 8899999999
Q ss_pred hCCEEEEeccccCCccC------CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 216 LGILVIADEVYGHLAFG------STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 216 ~~~~li~D~ay~~~~~~------~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+|+++|+|++|+.+... +.....+.. .+-..+..|.+| |++++.|+|++++.++
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~---~~~d~~~~s~~K-~~~~~~~~G~~~~~~~ 241 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSL---PGVQSITIDPHK-MGLSPIPAGGILFRSK 241 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccC---CCCCEEEECccc-cCCCcCCceEEEEeCH
Confidence 99999999999864321 001111111 111245568889 5788889998776543
No 213
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.80 E-value=2.2e-17 Score=152.62 Aligned_cols=213 Identities=13% Similarity=0.148 Sum_probs=156.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
.+++++|+.++ |.++..+|.++++..+.++..... -++...-..+|++.+++++ ..+..++.+
T Consensus 101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s 169 (476)
T PLN02955 101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP 169 (476)
T ss_pred CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence 46899999999 568899999999999988742211 1112223478999999999 456788888
Q ss_pred ChHHHHHHHHHHHh--------------cCCCCEEEecCCCCcchHHHHHHc----CcEEEEeeccCCCCcccCHHHHHh
Q 021547 118 GCMEAVEIILTVIT--------------RLGAANILLPRPGWPFYESFAKRN----HIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 118 g~~~a~~~~~~~l~--------------~~g~d~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
++..|...++.+|. .++ |.|++..-.|......++.. +.++..++. -|++.|++
T Consensus 170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~-d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~ 241 (476)
T PLN02955 170 TGFAANMAAMVAIGSVASLLAASGKPLKNEK-VAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNS 241 (476)
T ss_pred ChHHHHHHHHHHHhhccccccccccccCCCC-cEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHH
Confidence 88889888888873 355 78889999999988888876 466666653 28888888
Q ss_pred hcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCc
Q 021547 180 LADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSIS 255 (311)
Q Consensus 180 ~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~s 255 (311)
.++. +.+.|++....++.|.+.+ +++|.++|++||.++|+||+|+...++.........+. ..+..|+++|||
T Consensus 242 ~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLs 318 (476)
T PLN02955 242 LLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLS 318 (476)
T ss_pred HHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCc
Confidence 7643 3445555556899999999 99999999999999999999998776532111122221 134569999999
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
|.+|+.| |+++++. ++++.++..
T Consensus 319 KA~G~~G---Gfi~gs~--------~~~~~l~~~ 341 (476)
T PLN02955 319 KAAGCHG---GFIACSK--------KWKQLIQSR 341 (476)
T ss_pred cchhccC---ceeecHH--------HHHHHHHHh
Confidence 9998887 9988753 366766654
No 214
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.80 E-value=6.4e-18 Score=154.56 Aligned_cols=187 Identities=17% Similarity=0.147 Sum_probs=133.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL 139 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl 139 (311)
..++.+.+++...+. ++.+ ..-+.++|+.++++++ .+-..+.|++|+|++++++.++.++..+| |.++
T Consensus 13 ~~~~~v~~~~~~~~~-----~~~~~~~~~~~~~r~~la~l~~----~~~~~~~i~~t~~~t~al~~~~~~l~~~~-~~vl 82 (363)
T TIGR02326 13 TTSRTVKEAMLFDWC-----TWDSDYNIVVEQIRQQLLALAT----AEEGYTSVLLQGSGTFAVEAVIGSAVPKD-GKLL 82 (363)
T ss_pred CCCHHHHHHhCCCCC-----CCChHHHHHHHHHHHHHHHHhC----CCCCceEEEEcCCCHHHHHHHHHhcCCCC-CeEE
Confidence 456677766654432 2221 1123455666666663 22123479999999999999999998888 8777
Q ss_pred ecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 140 LPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 140 ~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
+..+.+.+. ...++..|.+++.++.. .++.+|++.+++.+++ +++.+.++++.||||..+| +++|+++|++
T Consensus 83 v~~~~~~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~ 157 (363)
T TIGR02326 83 VVINGAYGARIVQIAEYLGIPHHVVDTG--EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHR 157 (363)
T ss_pred EEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHH
Confidence 766555443 46678899999998864 3557899999998864 4577888899999999999 8999999999
Q ss_pred hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND 272 (311)
Q Consensus 216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~ 272 (311)
+|+++|+|++++. +. .+..+..++ ..+++.|++|+++ .+| +||++++.
T Consensus 158 ~g~~livD~~~~~---g~-~~~~~~~~~---~D~~~~s~~K~l~~p~G--~G~l~~~~ 206 (363)
T TIGR02326 158 HGKVTIVDAMSSF---GG-IPIDIAELH---IDYLISSANKCIQGVPG--FGFVIARQ 206 (363)
T ss_pred cCCEEEEEccccc---cC-cccchhhcC---ccEEEecCccccccCCc--ceEEEECH
Confidence 9999999998763 22 223344333 2388999999863 345 79998864
No 215
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=6.9e-18 Score=154.35 Aligned_cols=190 Identities=15% Similarity=0.096 Sum_probs=134.6
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 163 (311)
+..+.++.+++.+....+ .+..++++++++|+..++.+++++| |+|+++.|.|.++.. .++..|+++..++
T Consensus 61 ~gnPt~~~Le~~la~le~----~~~~v~~sSG~aAi~~~l~all~~G-D~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 61 RGTPTTDALCKAIDALEG----SAGTILVPSGLAAVTVPFLGFLSPG-DHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred CCChHHHHHHHHHHHHhC----CCCEEEECcHHHHHHHHHHHhcCCC-CEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 334455555555543222 2344566667999999999999999 999999999998764 5688899988875
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.. +.+.+++++++++++|++++|+||++.. .++++|+++|+++|+++|+|++|....+ ..++. +
T Consensus 136 ~~-------~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl~-~- 199 (395)
T PRK05967 136 PE-------IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPLD-F- 199 (395)
T ss_pred CC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChhH-c-
Confidence 31 4577999999999999999999998654 4599999999999999999999986322 12222 2
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
+..|++.|++|.++..| ...|+++. ++ ++.++++.. .....+.+++..+.+.+-|
T Consensus 200 --GaDivv~S~tKy~~Gh~d~~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~da~l~~rgl 256 (395)
T PRK05967 200 --GVDISIHAATKYPSGHSDILLGTVSA-NE-------KCWPQLLEAHGTLGLCAGPDDTYQILRGL 256 (395)
T ss_pred --CCCEEEEecccccCCCCCeeEEEEEc-CH-------HHHHHHHHHHHHcCCCCCHHHHHHHHcCc
Confidence 22399999999977644 66675554 32 244555433 2344566777666555444
No 216
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=9.9e-18 Score=156.08 Aligned_cols=218 Identities=14% Similarity=0.058 Sum_probs=142.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
.+..++|..++ -+.++.+++++...+.... ...|. ...-...+.+...+.+.+.+|. +..+|++++
T Consensus 24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~s 95 (416)
T PRK00011 24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHS 95 (416)
T ss_pred HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCC
Confidence 46779999886 2368899999876643110 00111 1111223333122234433343 344566655
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH-----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEe
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYES-----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~ 191 (311)
+++++..++.+++++| |+|+++.|+|..+.. .....|.+++.++++. +++.+|++++++.+++ ++++++++
T Consensus 96 -gt~al~~~l~~l~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~ 172 (416)
T PRK00011 96 -GSQANAAVYFALLKPG-DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAG 172 (416)
T ss_pred -chHHHHHHHHHhcCCC-CEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEEC
Confidence 4779999999999999 999999999975422 1233456777776542 3467999999998865 78888887
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
.++++ ...+ +++|.++|+++|+++|+|++|.. +.+.|..+..+. ...+++.|+||++ +|.|.||+++
T Consensus 173 ~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~ 240 (416)
T PRK00011 173 ASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILT 240 (416)
T ss_pred CCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEe
Confidence 65554 4445 89999999999999999999853 333332222222 1238899999974 7899999998
Q ss_pred eCCCCccchhhHHHHHhhhhc
Q 021547 271 NDPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~ 291 (311)
+++ +++++++....
T Consensus 241 ~~~-------~~~~~l~~~~~ 254 (416)
T PRK00011 241 NDE-------ELAKKINSAVF 254 (416)
T ss_pred CCH-------HHHHHHHHHhC
Confidence 653 36777765543
No 217
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=1.2e-17 Score=153.07 Aligned_cols=182 Identities=16% Similarity=0.143 Sum_probs=132.1
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 163 (311)
....|++.++++.+ .+..+++++|+.|+.+++. ++++| |+|+++.|.|.+.. ..++..|++++.++
T Consensus 51 ~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l~-~l~pG-d~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd 120 (380)
T PRK06176 51 TRFALEELIADLEG--------GVKGFAFASGLAGIHAVFS-LFQSG-DHVLLGDDVYGGTFRLFDKVLVKNGLSCTIID 120 (380)
T ss_pred hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHHH-HcCCC-CEEEEcCCChhHHHHHHHHHHHhcCeEEEEcC
Confidence 46788888888873 2345566666789987774 66899 99999999997543 45567888888776
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
. .|++.+++.+++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+. .+ +. +
T Consensus 121 ~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~p---~~-~- 184 (380)
T PRK06176 121 T-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-NP---LL-L- 184 (380)
T ss_pred C-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-Cc---cc-c-
Confidence 4 3889999999999999999999999999998 889999999999999999999864322 22 21 1
Q ss_pred CCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHH
Q 021547 244 SIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCE 304 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~ 304 (311)
+..+++.|++|.++.+|- -.|+++..++ ++.++++..+.. ....++...+.+
T Consensus 185 --gaDivv~S~tK~l~g~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~~~l~ 238 (380)
T PRK06176 185 --GADIVVHSGTKYLGGHSDVVAGLVTTNNE-------ALAQEIAFFQNAIGGVLGPQDSWLL 238 (380)
T ss_pred --CCCEEEecCceeccCCccceeeEEEecHH-------HHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 123999999999988774 4555655432 355666554332 233455444433
No 218
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.79 E-value=1.4e-17 Score=154.00 Aligned_cols=239 Identities=18% Similarity=0.132 Sum_probs=157.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++++++||..|.-..+.+. .+|.+.+++.++++... ..... ...+....+++.+.+.. ..+.++++++|++|
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~la~~L~~~~----~~~~~~f~~SGseA 104 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLW--HIGNG-YTNEPVLRLAKKLVDAT----FADKVFFCNSGAEA 104 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcc--cccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCCcHHH
Confidence 5889999988632222334 58999999999987421 11110 11223344444444322 23689999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcC
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
++.+++.... +|+++|+..+..|.+... .....+.. +..++. .|++.+++.+.
T Consensus 105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 177 (397)
T TIGR03246 105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALIS 177 (397)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhc
Confidence 9999987731 344678887777766532 33323211 111211 27899999888
Q ss_pred CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
++++++++..++++.|... +.+.+++|.++|++||+++|+||+|.++...|.-+ ....++-..++ .+++|.++ .
T Consensus 178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pDi---~t~~K~lg-g 252 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDI---LTSAKALG-G 252 (397)
T ss_pred cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCCE---EEeehhhh-C
Confidence 7888888776666777654 88999999999999999999999998775555322 22223222233 38999986 7
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+|+||++++. ++++.+... ...+++.++++++++.+.|+
T Consensus 253 G~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 253 GFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLD 293 (397)
T ss_pred CcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999999853 366666544 33456678899888877764
No 219
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=3.1e-17 Score=152.53 Aligned_cols=157 Identities=20% Similarity=0.165 Sum_probs=128.5
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 163 (311)
....|++.++++.. .+..+++++|++|+.+++.+++++| |+|+++.+.|.+. ...+...|++++.++
T Consensus 64 ~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pG-d~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd 134 (427)
T PRK05994 64 TNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPG-DEFIAARKLYGGSINQFGHAFKSFGWQVRWAD 134 (427)
T ss_pred cHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCC-CEEEEecCcchhHHHHHHHHHHhcCcEEEEEC
Confidence 45678888888873 3457888999999999999999999 9999999999854 344677899988886
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
. .|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|.... ...++. +
T Consensus 135 ~-------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl~-~- 198 (427)
T PRK05994 135 A-------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPIE-H- 198 (427)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCccc-c-
Confidence 4 2789999999989999999999999999998 8999999999999999999998522 112221 1
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+..+++.|++|.++.+|-.+|.+++.
T Consensus 199 --gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 199 --GADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred --CCcEEEEcCccccCCCCCcEEEEEEe
Confidence 22399999999999888888877764
No 220
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.78 E-value=1.8e-17 Score=155.67 Aligned_cols=201 Identities=27% Similarity=0.294 Sum_probs=142.2
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHH---HHHhhcCCCCCCCCCEEEeCChH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVA---EYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia---~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..++++.|.|+ +..+..+.++....- ....|.+. .-....++++. +++.+.+|. +.+++.+|+|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEecCcHH
Confidence 67788888754 445556655543221 11234430 11233555555 344665664 456899999999
Q ss_pred HHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547 121 EAVEIILTVIT-RLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN 195 (311)
Q Consensus 121 ~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n 195 (311)
+++.+++.++. .+| |+|+++.+.|+.+...++. .|.+++.++.++ + .+|++++++.++++++++++++| |
T Consensus 140 ~~~~~~~~a~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n 214 (447)
T PRK00451 140 ALAEAALMAVRITKR-KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-N 214 (447)
T ss_pred HHHHHHHHHHHhcCC-CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-C
Confidence 99999998885 688 9999999999988766554 689999998643 3 78999999999999999999998 8
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEE--eccccCCccCCCCCCcccccCCCCCeEEEe---cCcccCCCCcceeeEEEe
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIA--DEVYGHLAFGSTPYIPMGVFGSIVPVITLG---SISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~--D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~---s~sK~~~~~G~r~G~i~~ 270 (311)
|||.+.+ +++|.++|+++|+++++ |....... . ....+ +..+++. ++||.+.+.|+++||+.+
T Consensus 215 ~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~----~--~~~~~---~~D~~~~s~~k~~~~~~~~Gpg~G~l~~ 282 (447)
T PRK00451 215 FFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL----K--PPGEY---GADIVVGEGQPLGIPLSFGGPYLGFFAT 282 (447)
T ss_pred CCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC----C--CcccC---CCCEEEECCCcCCCCCCCCCCCchHHHh
Confidence 9999987 99999999999999998 54332111 0 11111 2235555 677778888999999987
Q ss_pred eC
Q 021547 271 ND 272 (311)
Q Consensus 271 ~~ 272 (311)
+.
T Consensus 283 ~~ 284 (447)
T PRK00451 283 RK 284 (447)
T ss_pred hH
Confidence 53
No 221
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.78 E-value=8.2e-18 Score=142.85 Aligned_cols=282 Identities=18% Similarity=0.168 Sum_probs=199.0
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCC-cHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRT-AAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~-~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
+.+..++.+-.. +.+...+..+|++.|.....-+-|+ -|.|+++-...... ...+.|.|-.|++.++++-++.+
T Consensus 12 a~p~~vf~~~~~----y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~ 87 (410)
T KOG1412|consen 12 APPIEVFKLNAS----YGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELL 87 (410)
T ss_pred CChHHHHhhHHH----hcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHh
Confidence 555666665543 4444578889999996553333332 24444333322222 23457999999999999999999
Q ss_pred hhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcC-cEEEEeeccCCCCcccCHH
Q 021547 101 NRDLPYKLSADDI--YITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNH-IEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 101 ~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~ 175 (311)
.......+..+++ +-+-|||+|+.+....|.. .. ..|.+..|+|.+....++..| ..+..++....++-++|++
T Consensus 88 lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~-~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e 166 (410)
T KOG1412|consen 88 LGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNK-NTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLE 166 (410)
T ss_pred cCCCchhhhhccccceeeccccchhhhhHHHHHHhccc-ceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHH
Confidence 6554445556665 4467778898887777743 34 689999999999999999999 5677788777777789999
Q ss_pred HHHhhcCCCc-cEEEEe-CC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC--CcccccCCC-CCeE
Q 021547 176 AVEALADENT-AAIVII-NP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY--IPMGVFGSI-VPVI 249 (311)
Q Consensus 176 ~l~~~l~~~~-~~i~i~-~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~--~~~~~~~~~-~~~i 249 (311)
.+...++..+ +.+++. .+ +||||.-.+.|++..|++..++.+.+.+.|-+|+++.-++... ..+..+... ..++
T Consensus 167 ~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~f 246 (410)
T KOG1412|consen 167 GFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELF 246 (410)
T ss_pred HHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEE
Confidence 8888776433 333333 34 8999999999999999999999999999999999987654221 122222223 3489
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.||+|.||+.+.|+|.+.+-.++.-. .+.+..++... +.-.++|+.....+++++|++
T Consensus 247 v~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t 307 (410)
T KOG1412|consen 247 VCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST 307 (410)
T ss_pred EEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC
Confidence 9999999999999999997654332111 23455665555 344578888899999998875
No 222
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=2.9e-17 Score=152.67 Aligned_cols=158 Identities=17% Similarity=0.162 Sum_probs=130.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~ 162 (311)
+...++++.+++++. .+..++|+++++|+.+++.+++++| |+|+++...|...... ++..|++++.+
T Consensus 64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~G-d~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v 134 (433)
T PRK08134 64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAG-SHIVASSALYGGSHNLLHYTLRRFGIETTFV 134 (433)
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCccHHHHHHHHHHHhhCCeEEEEE
Confidence 346788999998883 2357889999999999999999999 9999999999865443 35589999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
++. |++.+++.+++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.++..-.. ..++ .+
T Consensus 135 d~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~ 199 (433)
T PRK08134 135 KPG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EH 199 (433)
T ss_pred CCC-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hc
Confidence 752 789999999999999999999999999999 99999999999999999999975221 1222 12
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
. -.+++.|.+|.++.+|..+|.+++.
T Consensus 200 G---aD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 200 G---ADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred C---CCEEEeccccccCCCCCceEEEEEe
Confidence 2 2399999999999999888887764
No 223
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=2.3e-17 Score=153.77 Aligned_cols=166 Identities=23% Similarity=0.262 Sum_probs=125.3
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcC
Q 021547 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNH 156 (311)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g 156 (311)
..|... |.+ .++++.+++.+..| .++.++++|+++++.+++ .++++| |+|+++.+.|..+. ..+...|
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~G-D~VI~~~~~y~~t~~ll~~~l~~~G 196 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNG-EEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCC-CEEEEcCCchhhHHHHHHHHHHHCC
Confidence 357654 554 56777777766433 456777788888987666 567899 99999999999876 3455789
Q ss_pred cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC
Q 021547 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY 236 (311)
Q Consensus 157 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~ 236 (311)
++++.++. .|++++++.+++++++|++++|+||+|...+ +++|+++|+++|+++|+|++|+.... +.
T Consensus 197 ~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~-~~-- 263 (464)
T PLN02509 197 VVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVL-SR-- 263 (464)
T ss_pred eEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCcccccc-CC--
Confidence 88887753 3689999999999999999999999999755 99999999999999999999875332 21
Q ss_pred CcccccCCCCCeEEEecCcccCCCCcc-eeeEEEeeC
Q 021547 237 IPMGVFGSIVPVITLGSISKRWIVPGW-RFGWLATND 272 (311)
Q Consensus 237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~ 272 (311)
++. + +..++++|++|.++.+|- -.|.+++.+
T Consensus 264 -pl~-~---gaDivv~S~tK~l~G~gdv~gG~v~~~~ 295 (464)
T PLN02509 264 -PLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_pred -hhh-c---CCcEEEecCcccccCCCccceeEEEecc
Confidence 111 1 223999999999887653 456666544
No 224
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.78 E-value=2.8e-18 Score=147.50 Aligned_cols=283 Identities=18% Similarity=0.181 Sum_probs=203.1
Q ss_pred HHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHH
Q 021547 20 EREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAF-PCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAE 98 (311)
Q Consensus 20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 98 (311)
-++++++.|-.+.+.+ .+...+..||++.|...-. ...-.-+.|++|-++.........|.|-.|++++.+..++
T Consensus 31 V~maPpDpILGVTeAf----k~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sak 106 (427)
T KOG1411|consen 31 VEMAPPDPILGVTEAF----KKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAK 106 (427)
T ss_pred CCCCCCCCcccHHHHH----hcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHH
Confidence 3457888888888764 3336788899999954311 1122457777777766655555689999999999999999
Q ss_pred HHhhcCCCCCCCCCEEE--eCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547 99 YLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL 174 (311)
Q Consensus 99 ~l~~~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 174 (311)
+........+..++|+. |-+||+++......|.. ++ ..|.++.|+|.+.....+..|+.+..++.......++|.
T Consensus 107 La~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~-~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~ 185 (427)
T KOG1411|consen 107 LALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS-RDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDF 185 (427)
T ss_pred HhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc-cceeecCCcccccCccccccCcceeeeeeccccccccch
Confidence 99553333334456644 56678888877766643 67 889999999999999999999999998887767778888
Q ss_pred HHHHhhcCCCc-cEEEEeC--CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC--CCcccccC-CCCCe
Q 021547 175 EAVEALADENT-AAIVIIN--PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP--YIPMGVFG-SIVPV 248 (311)
Q Consensus 175 ~~l~~~l~~~~-~~i~i~~--p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~--~~~~~~~~-~~~~~ 248 (311)
+.+.+-+.+-+ ..+++.+ .+||||+-.+.|++++|.++.++.+.+-+.|.+|.+|..++.. -..+..+. ...++
T Consensus 186 ~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~ 265 (427)
T KOG1411|consen 186 KGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEI 265 (427)
T ss_pred HHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCce
Confidence 87655554322 2234443 4999999999999999999999999999999999997654321 11122222 24468
Q ss_pred EEEecCcccCCCCcceeeEE--EeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 249 ITLGSISKRWIVPGWRFGWL--ATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.|+.|.+|+.|.|+|.+ ++.+.+ .. ..+..+++... ....+++-=...+++.+|+|
T Consensus 266 ~laQSyAKNMGLYgERvGa~svvc~~ad--~A-~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d 327 (427)
T KOG1411|consen 266 LLAQSYAKNMGLYGERVGALSVVCKDAD--EA-KRVESQLKILIRPMYSNPPLHGARIVATILSD 327 (427)
T ss_pred EeehhhhhhcchhhhccceeEEEecCHH--HH-HHHHHHHHHHhcccccCCCccchhhhhhccCC
Confidence 99999999999999999996 333322 11 13556666663 34456666677777777765
No 225
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.78 E-value=2.5e-17 Score=146.83 Aligned_cols=198 Identities=20% Similarity=0.205 Sum_probs=156.1
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+|.|+... ..|..|++.++|...+.... .+.|+ ....+++.|+.|++.+ ++++++|++|+|+
T Consensus 2 miYlD~~A-----TTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~ 70 (386)
T COG1104 2 MIYLDNAA-----TTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGA 70 (386)
T ss_pred cccccccc-----cCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCC
Confidence 35555554 35778999999998876421 12222 1233577889999999 4577999999999
Q ss_pred HHHHHHHHHHH--hc----CCCCEEEecCCCCcchHHHHHHc---CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547 120 MEAVEIILTVI--TR----LGAANILLPRPGWPFYESFAKRN---HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190 (311)
Q Consensus 120 ~~a~~~~~~~l--~~----~g~d~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i 190 (311)
|++.++++... .. .| ..|+++.-.|+...+.++.+ |+++.+++++ .++.+|+++|++++++++.+|.+
T Consensus 71 TEsnNlaI~g~~~a~~~~~~~-~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~--~~G~v~~e~L~~al~~~T~LVSi 147 (386)
T COG1104 71 TESNNLAIKGAALAYRNAQKG-KHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD--SNGLVDLEQLEEALRPDTILVSI 147 (386)
T ss_pred cHHHHHHHHhhHHhhhcccCC-CeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC--CCCeEcHHHHHHhcCCCceEEEE
Confidence 99999988873 21 45 89999999999887766666 9999999875 36789999999999999999999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
...||.+|++.| +++|.++|+++++++++|.+++. |+-+..+..+.- .+...|-+|.+|..| +|.+.+
T Consensus 148 m~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~v---D~ls~SaHK~~GpkG--iGaLyv 215 (386)
T COG1104 148 MHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGV---DLLSFSAHKFGGPKG--IGALYV 215 (386)
T ss_pred EecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCc---ceEEeehhhccCCCc--eEEEEE
Confidence 999999999999 99999999999999999999986 555555544332 266779999988888 566665
No 226
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.78 E-value=4.8e-17 Score=149.72 Aligned_cols=193 Identities=21% Similarity=0.206 Sum_probs=145.4
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR 142 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~ 142 (311)
.+.-.+++.+.+.++. |.......++|++++++++. ++.++++|+++|+.+++.++ +++| |+|+++.
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~G-d~Viv~~ 76 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPG-DRVWTTP 76 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCC-CEEEeCC
Confidence 3455778888776543 33345678999999999943 34566778899999999999 7899 9999999
Q ss_pred CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
++|..+...++..|++++.+++++ +++.+|++++++.++ +++++++++ |++|...+ +++|.++|+++|+
T Consensus 77 ~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~ 149 (380)
T TIGR03588 77 ITFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGL 149 (380)
T ss_pred cchHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCC
Confidence 999999999999999999999754 356799999999998 688888754 46888877 8999999999999
Q ss_pred EEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 219 LVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 219 ~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
+||+|++|+.. .+++.+.... .+. .+.+.|++ |.++.+ .-|+++..++ ++.++++..
T Consensus 150 ~lI~D~a~a~g~~~~~~~~g~~-~~~----d~~~~S~~~~K~~~~~--~GG~v~~~~~-------~~~~~~~~~ 209 (380)
T TIGR03588 150 KIIEDASHALGAEYGGKPVGNC-RYA----DATVFSFHPVKIITTA--EGGAVTTNDE-------ELAERMRLL 209 (380)
T ss_pred EEEEECCCcccCccCCEeCCCc-ccc----ceEEEecCCCCccccc--CceEEEECCH-------HHHHHHHHH
Confidence 99999999863 3444322210 011 27777776 876543 4577777654 356655543
No 227
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.78 E-value=1.7e-17 Score=145.80 Aligned_cols=214 Identities=19% Similarity=0.252 Sum_probs=136.4
Q ss_pred CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH-H-HHHHHHh-----------cCCCCEEEecCCC
Q 021547 79 MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV-E-IILTVIT-----------RLGAANILLPRPG 144 (311)
Q Consensus 79 ~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~-~-~~~~~l~-----------~~g~d~Vl~~~p~ 144 (311)
+..+| +...|++++|+-+++.+ ++.+++|++..+++-.+ + .+..+++ +.+.-+.|||.|+
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG 133 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG 133 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred cccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence 35589 88899999999999999 67899999976665443 3 3333332 1112589999999
Q ss_pred CcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEE
Q 021547 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILV 220 (311)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~l 220 (311)
|.....+++.+|++.+.||+..+ ++|+|.+++++. +..|+++.+ .-+||||.++|+|.+++|+++- ...+..|
T Consensus 134 YDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI 210 (425)
T PF12897_consen 134 YDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI 210 (425)
T ss_dssp -HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred chHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence 99999999999999999998643 689999999873 466776543 2389999999999999999983 3569999
Q ss_pred EEeccccCCccC-CCCCCc-ccc------cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hc
Q 021547 221 IADEVYGHLAFG-STPYIP-MGV------FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LG 291 (311)
Q Consensus 221 i~D~ay~~~~~~-~~~~~~-~~~------~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~ 291 (311)
+.|++|....+. ..+... +.- -...++++.+.|.||. ..||-+++++.++.. -++.++.. ..
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~~--------Nl~~~~~~~~~ 281 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASEA--------NLAWIKKHLSV 281 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-HH--------HHHHHHHHHHH
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCHH--------HHHHHHHHhcC
Confidence 999999976663 222111 111 1345679999999999 899999999988653 35555544 33
Q ss_pred cccCCCchhHHHHHhhhhc
Q 021547 292 VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 292 ~~~~~~~~~q~~~~~~l~~ 310 (311)
.+.++..++|..-.+++.+
T Consensus 282 ~tIgpdKvNQLRHvrff~d 300 (425)
T PF12897_consen 282 QTIGPDKVNQLRHVRFFKD 300 (425)
T ss_dssp H-S---HHHHHHHHHHHHS
T ss_pred ceeCccHHHHHHHHHHhcC
Confidence 4678999999999998876
No 228
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.77 E-value=2.4e-17 Score=152.70 Aligned_cols=246 Identities=16% Similarity=0.071 Sum_probs=155.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||..|.-.. ..--.+|.+.+++.+.++.... .... -..+..+.+.+.+.+..+ .+.++++++|++|
T Consensus 29 dg~~~lD~~~~~~~~-~~Gh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A 100 (400)
T PTZ00125 29 EGKKYYDFLSAYSAV-NQGHCHPKILAALINQAQKLTL--TSRA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAEA 100 (400)
T ss_pred CCCEEEEcccCHhhc-cCCcCCHHHHHHHHHHHHhccc--cccc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence 578899998763211 1112578999999998763221 1110 012233444444443322 3689999999999
Q ss_pred HHHHHHHHhc----------CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCC--CCcccCHHHHHhhcC-CCc
Q 021547 123 VEIILTVITR----------LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPE--RGWEVDLEAVEALAD-ENT 185 (311)
Q Consensus 123 ~~~~~~~l~~----------~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~l~-~~~ 185 (311)
++.++..+.. .+ ++|++.+-.|.+....... .+..... .+..+. .-...|++.+++.++ +++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~-~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 179 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQ-AKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV 179 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCC-CeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence 9999987742 23 6788888877765433222 2211100 000000 000138899999886 578
Q ss_pred cEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 186 AAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
+++++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|..+ ........++++ ++||.++.+++|
T Consensus 180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd~~---~~sK~l~~g~~~ 255 (400)
T PTZ00125 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPDIV---LLGKALSGGLYP 255 (400)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCCEE---EEcccccCCCcC
Confidence 88888888999999886 4569999999999999999999998776655422 111111122233 478998765569
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+||++++. ++++.+... ...+.+.+++.|+++.+.|+
T Consensus 256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 293 (400)
T PTZ00125 256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALE 293 (400)
T ss_pred cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999854 366666543 33456778888888876553
No 229
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=4.2e-17 Score=154.03 Aligned_cols=205 Identities=17% Similarity=0.144 Sum_probs=148.5
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547 50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY---APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126 (311)
Q Consensus 50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~ 126 (311)
.+.|.+. +..+|.+.+++.+...-..++.| ....|..+++..+.+++.+.+|.+ ...+..++|+.+.+..+
T Consensus 73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l 146 (481)
T PRK04366 73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGL 146 (481)
T ss_pred ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHH
Confidence 4455533 56678888888765211244577 356788999999999999888853 23344445555444422
Q ss_pred --HH-HHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547 127 --LT-VITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199 (311)
Q Consensus 127 --~~-~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~ 199 (311)
++ .+.++| | +|+++.|.|+.+...++..|++++.+++. .++.+|++.|++.++++++++++++|+ |||.
T Consensus 147 ~~~r~~~~~~G-d~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~ 222 (481)
T PRK04366 147 LMIRAYHEARG-DTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGL 222 (481)
T ss_pred HHHHHHhhccC-cCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Cccc
Confidence 22 334566 5 99999999999999999999999999874 456899999999999899999999988 9996
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND 272 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~ 272 (311)
. ..++++|+++|+++|.++++|.++..-.. +. .....+ +-.++++|.+|.|+.| |..+|++.+.+
T Consensus 223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~ 291 (481)
T PRK04366 223 F--ERNILEIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE 291 (481)
T ss_pred c--chHHHHHHHHHHHcCCEEEEEecChhhhc-cc--CCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence 4 34699999999999999999999863211 11 111222 2348999999998765 45677776643
No 230
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.77 E-value=3.3e-17 Score=152.81 Aligned_cols=252 Identities=14% Similarity=0.115 Sum_probs=160.3
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|...... --.+|.+.+++.+++..... .+....+.+ ....+++++....+.+.. +.++++++|++
T Consensus 38 ~dG~~~lD~~~g~~~~~l-Gh~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGse 113 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNT-GHLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSE 113 (425)
T ss_pred CCCCEEEEcCCchhhcCC-CCCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHH
Confidence 358889999877433221 23578899999999875332 222212233 344777777765543332 46777777788
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEE--------------EeeccC-CCCccc--CHHHHHhhcC-
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVR--------------HFDLLP-ERGWEV--DLEAVEALAD- 182 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~--------------~~~~~~-~~~~~~--d~~~l~~~l~- 182 (311)
|++.+++.... .+..+|+...++|.+....+...+.... .++... ..+... +++.+++.+.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 193 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKN 193 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHh
Confidence 88877766542 2225677779999887655554432211 111100 011101 1445777664
Q ss_pred ----CCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547 183 ----ENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257 (311)
Q Consensus 183 ----~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 257 (311)
++..++++... +++.....+++.+++|.++|++||+++|+||+|.++.+.+. ...+... +.+..|.||||.
T Consensus 194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~~~~---~~~pdi~s~sK~ 269 (425)
T PRK08088 194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQM---GVAADLTTFAKS 269 (425)
T ss_pred ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhHHhhc---CCCCCEEEEecc
Confidence 23344444433 57777788999999999999999999999999998765543 2222222 223557899999
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++ +|+|+||++++. ++++.+... ...+++.+++.|+++.++|+.
T Consensus 270 l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 270 IA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred cc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 86 899999999853 467776654 345678899999999998863
No 231
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=1.2e-16 Score=146.41 Aligned_cols=197 Identities=16% Similarity=0.090 Sum_probs=134.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCC--CCC----CCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-------MFN--CYA----PMFGLPLARRAVAEYLNRDLPYKLSA 110 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-------~~~--~Y~----~~~g~~~lr~~ia~~l~~~~g~~~~~ 110 (311)
..++++|+.++ |..+..++.+.+++.+.+... ... +.. ...-+.++|+.++++++. +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-------~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-------P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------C
Confidence 46799999998 567888888888888877532 111 111 222356788888888842 2
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------C
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------N 184 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 184 (311)
+.+++++|. .++..++..+.++| |.|++..-.|......++......+.++ ..|+++|++.++. +
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~-d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVT-DYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCC-CEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCC
Confidence 235555555 56666666666778 8888888888877777666543333332 2478888887752 3
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
++++++++++|++|.+.| +++|.++|+++|+++++|++|+...++ +.... ..+......+.+.|+||.+|..|
T Consensus 144 ~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~--~~~~~~~~~~~~~tlsK~~g~~G 218 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC--HSLGYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchH--HhhCCCCCcEEEEechhhhhcCc
Confidence 556678899999999999 899999999999999999999863332 21110 11111112367889999998878
Q ss_pred ce
Q 021547 263 WR 264 (311)
Q Consensus 263 ~r 264 (311)
.+
T Consensus 219 ~~ 220 (370)
T PRK05937 219 AA 220 (370)
T ss_pred eE
Confidence 33
No 232
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.76 E-value=7.3e-17 Score=146.80 Aligned_cols=185 Identities=19% Similarity=0.202 Sum_probs=140.0
Q ss_pred HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCCCCcc
Q 021547 69 DAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRPGWPF 147 (311)
Q Consensus 69 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~ 147 (311)
+++.+.+.++. |.......++++.++++++ .+++++++|+++++..++.++ .++| |+|+++.++|..
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~g-d~vl~~~~~~~~ 70 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPG-DEVIVPSFTFVA 70 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCC-CEEEeCCcchHH
Confidence 45566665543 3333467899999999993 356888889999999999998 5899 999999999999
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+...+...|.+++.+++.. .++.+|++.+++.++++++++++++ ++|...+ +++|.++|+++|+++|+|++|+
T Consensus 71 ~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~ 143 (352)
T cd00616 71 TANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQA 143 (352)
T ss_pred HHHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCC
Confidence 9999999999999998753 3678899999999988899888764 6898877 8889999999999999999998
Q ss_pred CC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547 228 HL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288 (311)
Q Consensus 228 ~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 288 (311)
.. .+.+. .+..+ ..+.+.|++ |.+ ++.+.|+++..++ ++.++++.
T Consensus 144 ~g~~~~~~---~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~ 191 (352)
T cd00616 144 LGATYKGR---KVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARL 191 (352)
T ss_pred CCCeECCE---EcccC----cceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHH
Confidence 53 22221 11111 126677766 876 4445688887653 35555554
No 233
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.76 E-value=2.4e-16 Score=146.97 Aligned_cols=207 Identities=19% Similarity=0.186 Sum_probs=146.2
Q ss_pred ecCCCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547 49 PLGHGDPAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127 (311)
Q Consensus 49 ~~~~g~p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~ 127 (311)
.|+.|.|...... ..++.-.+++.+.+.+... .+++ ...+|++++++++. .+++++++|+++++.+++
T Consensus 27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL 95 (438)
T PRK15407 27 PFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLAF 95 (438)
T ss_pred cccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHH
Confidence 3688876532211 1223333444444443222 2222 35789999999994 346999999999999988
Q ss_pred HHH---------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 128 TVI---------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 128 ~~l---------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
.++ +++| |+|+++.++|..+...+...|++++.+++++ .++.+|++.+++.+++++++|+++++ +|
T Consensus 96 ~al~~~~~~~~~~~pG-d~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G 170 (438)
T PRK15407 96 SALTSPKLGDRALKPG-DEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG 170 (438)
T ss_pred HHHhhccccccCCCCC-CEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence 876 3689 9999999999999999999999999998754 46789999999999989999998875 34
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCC
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNG 275 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~ 275 (311)
... ++++|.++|+++|++||+|++|+.. .++|....+ +.+ +.+.||+ |.+.. |- -|++++++++
T Consensus 171 ~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~---~gd----~~~fSf~~~k~~~~-ge-GG~l~t~d~~- 237 (438)
T PRK15407 171 NPF---DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT---FGD----IATLSFYPAHHITM-GE-GGAVFTNDPL- 237 (438)
T ss_pred Chh---hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeec---cCc----eEEEeCCCCCCccc-cC-ceEEEECCHH-
Confidence 433 4899999999999999999999853 345543322 221 5566665 55432 33 4898887653
Q ss_pred ccchhhHHHHHhhhh
Q 021547 276 VLQKSGIVGSIKACL 290 (311)
Q Consensus 276 ~~~~~~~~~~~~~~~ 290 (311)
+.++++.+.
T Consensus 238 ------l~~~~~~~~ 246 (438)
T PRK15407 238 ------LKKIIESFR 246 (438)
T ss_pred ------HHHHHHHHH
Confidence 555555543
No 234
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.7e-16 Score=147.48 Aligned_cols=160 Identities=19% Similarity=0.127 Sum_probs=126.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~ 162 (311)
+....|++.++++.+ .+..+++++|+.|+.+++.+++++| |+|+++...|.+... .+...|++++.+
T Consensus 69 p~~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~G-d~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v 139 (436)
T PRK07812 69 PTQDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAG-DHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV 139 (436)
T ss_pred chHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCC-CEEEEeCCcchHHHHHHHHHhhcCeEEEEEE
Confidence 345678888888873 3457888888999999999999999 999999988887543 344577777776
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+ +. .|++.+++.+++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.-. ...++. +
T Consensus 140 d-d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~----~~~pl~-~ 205 (436)
T PRK07812 140 E-DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPY----LIRPLE-H 205 (436)
T ss_pred C-CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc----cCCchh-c
Confidence 4 11 2889999999999999999999999999999 9999999999999999999987421 112221 1
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+-.+++.|++|.++.+|--+|++++..
T Consensus 206 ---GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 206 ---GADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred ---CCCEEEEecccccCCCCCeEEEEEEcC
Confidence 223888999999999988888888753
No 235
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.8e-16 Score=145.67 Aligned_cols=243 Identities=17% Similarity=0.143 Sum_probs=163.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~ 120 (311)
.+++.++||..|.-. ..++.+|.+.+++.+++.... .+. .....++++.+++.+.. ..+ .++++++++
T Consensus 26 ~dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~------~~~~~~~~~~SGs 94 (375)
T PRK04260 26 TDGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG------DKDYLAFFCNSGA 94 (375)
T ss_pred CCCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc------CcCCEEEEcCccH
Confidence 357889999877321 234557889999999886422 222 22346788899988743 123 468899999
Q ss_pred HHHHHHHHHHh--cCCCCEEEecCCCCcchH-HHHHHcCcEEEE--e--eccCCC-CcccCHHHHHhhcCCCccEEEEeC
Q 021547 121 EAVEIILTVIT--RLGAANILLPRPGWPFYE-SFAKRNHIEVRH--F--DLLPER-GWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 121 ~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~--~--~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
+++..+++... ..+ ++|++....|.+.. ......+.+... . .+.... ....|++.+++.+++++.++++..
T Consensus 95 eA~~~Al~~ar~~~~~-~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~ 173 (375)
T PRK04260 95 EANEAAIKIARKATGK-QEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLEL 173 (375)
T ss_pred HHHHHHHHHHHHhcCC-CeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECC
Confidence 99998888764 234 78998888877532 333222221100 0 000000 001378999998877888888889
Q ss_pred CCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
++|++|...+ .+.++++.++|+++|+++|+||+|.++...|..+ ........++ +.||||.++ +|+|+||++++
T Consensus 174 v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~ 248 (375)
T PRK04260 174 VQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAK 248 (375)
T ss_pred eECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEc
Confidence 9999999754 5679999999999999999999998876555322 2112222223 338999975 79999999996
Q ss_pred CCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
. ++.+.+... ...++..++++|+++.+.|+
T Consensus 249 ~--------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~ 279 (375)
T PRK04260 249 S--------SLGGAFGYGSHGSTFGGNKLSMAAASATLD 279 (375)
T ss_pred H--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 4 366666543 33456779999999988874
No 236
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.75 E-value=4.9e-16 Score=142.56 Aligned_cols=191 Identities=25% Similarity=0.264 Sum_probs=145.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCC----CCCC----CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHHHH-
Q 021547 61 FRTAAVAEDAIVDSVRSSMFN----CYAP----MFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILTVI- 130 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l- 130 (311)
.+.|+.+.+++.+.+...... .+.. ..-+.++|+.++++++ +++ ++|++++|++.+++.++.++
T Consensus 9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccccchhhhhhhhccc
Confidence 367889999999887532111 1111 1123467788888884 455 78999999999999999999
Q ss_pred --hcCCCCEEEecCCCCcchH----HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 131 --TRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 131 --~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
.++| ++|++....|++.. ...+..|+++..++... +..+|++.+++.++++++++++++..|.+|...|
T Consensus 83 ~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~--~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p-- 157 (371)
T PF00266_consen 83 NPLKPG-DEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP--GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP-- 157 (371)
T ss_dssp HHGTTT-CEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT--TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS--
T ss_pred cccccc-cccccccccccccccccccccccchhhhccccccc--cchhhhhhhhhhhccccceEEeecccccccEEee--
Confidence 6889 99999999998654 45567899999998753 3468999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++|.++|+++|+++++|.+++... -...+..++ ..+++.|..|.+|.+| +|++.+++
T Consensus 158 -i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~~---~D~~~~s~~Kl~gp~G--~g~l~v~~ 215 (371)
T PF00266_consen 158 -IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDELG---ADFLVFSSHKLGGPPG--LGFLYVRP 215 (371)
T ss_dssp -HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTTT---ESEEEEESTSTTSSST--EEEEEEEH
T ss_pred -eceehhhhhccCCceeEechhcccc----ccccccccc---cceeeecccccCCCCc--hhhheehh
Confidence 9999999999999999999999622 223333332 2389999999545455 68888864
No 237
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=2e-16 Score=144.68 Aligned_cols=188 Identities=12% Similarity=0.089 Sum_probs=141.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~ 162 (311)
+....|++.++++- ..+..+++++|++|+.+++.+++++| |+|+++...|.+.... ++..|+++..+
T Consensus 62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~G-D~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v 132 (395)
T PRK08114 62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQG-DHVLMTGTAYEPTQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCC-CEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 34566777777765 45678888889999999999999999 9999999999776544 46789998887
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC--CEEEEeccccCCccCCCCCCccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG--ILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~--~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
+. .|.+.+++.+++++++|++.+|.||+|.+.+ +++|+++|++++ +++++|++++.-.. ..++
T Consensus 133 d~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl- 197 (395)
T PRK08114 133 DP-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKAL- 197 (395)
T ss_pred CC-------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----cCHH-
Confidence 64 3778999999999999999999999999999 999999999984 99999999985221 1111
Q ss_pred ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+ +-.|+++|.+|.++.+| .-.|.++. ++ ++++.++.. .......+++..+.+.+-|+
T Consensus 198 ~~---GaDivv~S~tKyl~Ghsdv~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 198 DF---GIDISIQAGTKYLVGHSDAMIGTAVA-NA-------RCWEQLRENSYLMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred Hc---CCcEEEEcCcccccCCCcceeEEEEc-CH-------HHHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence 12 23399999999988887 56665543 32 244444433 23455777777776655443
No 238
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=6.1e-16 Score=143.11 Aligned_cols=248 Identities=15% Similarity=0.088 Sum_probs=162.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-... .--.+|.+.+++.+++.... .+... -..+....+++.+....+ ..+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse 109 (408)
T PRK04612 37 DQGREYLDLAAGIAVCG-LGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE 109 (408)
T ss_pred CCCCEEEEcCccHhhcc-CCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence 35889999987732111 12357899999999887432 12211 123344556666654332 1268999999999
Q ss_pred HHHHHHHHHhc--------CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCC--CCcccCHHHHHhhcCCCccE
Q 021547 122 AVEIILTVITR--------LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPE--RGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 122 a~~~~~~~l~~--------~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~l~~~~~~ 187 (311)
|++.+++.... +++.+|+....+|.+....+.. .+..... -+..+. .-...|.+.+++.+..+..+
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 189 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA 189 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence 99998877642 2325788888888775433322 2211100 000000 00112788888888767788
Q ss_pred EEEeCCCCCCccCCC--HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547 188 IVIINPCNPCGNVLT--YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 188 i~i~~p~nptG~~~~--~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
.++..|.+++|.+++ ++.+++|.++|++||+++|+||+|.++...|..+ .. ...+.+..+.++||.++ +|+|+
T Consensus 190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a~---~~~~~~pdi~t~~K~l~-~G~pi 264 (408)
T PRK04612 190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-AH---WQEQVTPDIVTLAKALG-GGFPI 264 (408)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-hh---hhcCCCCCEEEEcchhc-CCCce
Confidence 888888877776655 6689999999999999999999999876655321 11 12233467789999986 79999
Q ss_pred eEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 266 GWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 266 G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
||+++++ ++++.+... ...+++.++++++++.+.|+
T Consensus 265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~ 301 (408)
T PRK04612 265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALR 301 (408)
T ss_pred EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 9998753 355555543 34456789999999988875
No 239
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=4.1e-16 Score=140.06 Aligned_cols=192 Identities=19% Similarity=0.211 Sum_probs=153.0
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR 142 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~ 142 (311)
..+-.+++.+.++++.+.. .+-..++++++++|+ ...+.+.++++|.|+.+++++| +++| |+|++++
T Consensus 14 ~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~G-DeVI~ps 81 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPG-DEVIVPS 81 (374)
T ss_pred chHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCC-CEEEecC
Confidence 4677888899998876533 335789999999999 5568899999999999999976 4899 9999999
Q ss_pred CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
-+|......+...|++++++++++ +.+.+|++.+|+++++++|+|+.++- .+|. + +++|.++|++||++||
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl~G~~~----d---m~~i~~la~~~~l~vI 153 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHLAGQPC----D---MDAIMALAKRHGLPVI 153 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehhccCCC----C---HHHHHHHHHHcCCeEE
Confidence 999999999999999999999865 56789999999999999999998775 4444 4 9999999999999999
Q ss_pred EeccccC-CccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547 222 ADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 222 ~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 291 (311)
+|.+++. ..|.|+...++.. +-+.|| +|.+... --|.++.+|+ ++.++++.+..
T Consensus 154 EDaAqa~Ga~y~gk~vGt~Gd-------~~~fSF~~~K~ittg--EGGav~tnd~-------ela~k~~~lr~ 210 (374)
T COG0399 154 EDAAQAHGATYKGKKVGSFGD-------IGAFSFHATKNLTTG--EGGAVVTNDE-------ELAEKARSLRN 210 (374)
T ss_pred EEcchhccCeecCcccccccc-------eEEEEecCCCCcccc--CceEEEeCCH-------HHHHHHHHHHH
Confidence 9999985 4566765444432 555565 5665433 4588887664 47777776543
No 240
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.73 E-value=2.5e-16 Score=144.00 Aligned_cols=193 Identities=24% Similarity=0.283 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCC
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRP 143 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p 143 (311)
++-.+++.+.+.++....+ ..-..++++.+++++ ..++++.++++|.|+.+++.++- ++| |+|+++..
T Consensus 5 ~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~g-deVi~p~~ 73 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPG-DEVIVPAY 73 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTT-SEEEEESS
T ss_pred HHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcC-ceEecCCC
Confidence 4566777888877644333 335789999999999 45789999999999999999985 689 99999999
Q ss_pred CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+|..+...+...|++++.+++++ +++.+|++.+++.+++++++|++++. .|... ++.+|.++|+++|++||+|
T Consensus 74 t~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~---d~~~i~~~~~~~~i~lIeD 146 (363)
T PF01041_consen 74 TFPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNPA---DMDAIRAIARKHGIPLIED 146 (363)
T ss_dssp S-THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE
T ss_pred cchHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCcc---cHHHHHHHHHHcCCcEEEc
Confidence 99999999999999999999864 57799999999999999999998875 23333 4999999999999999999
Q ss_pred ccccCC-ccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547 224 EVYGHL-AFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 224 ~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 291 (311)
.+++.. .+.|+...+ +. .+.+.|| +|.+ +.-.-|+|+++++ ++.++++.+..
T Consensus 147 ~a~a~g~~~~g~~~G~---~g----d~~~fSf~~~K~i--~~geGG~v~~~~~-------~~~~~~~~~~~ 201 (363)
T PF01041_consen 147 AAQAFGARYKGRPVGS---FG----DIAIFSFHPTKII--TTGEGGAVVTNDP-------ELAERARALRN 201 (363)
T ss_dssp -TTTTT-EETTEETTS---SS----SEEEEESSTTSSS---SSS-EEEEESTH-------HHHHHHHHHTB
T ss_pred cccccCceeCCEeccC---CC----CceEecCCCCCCC--cCCCCeeEEecHH-------HHHHHhhhhhc
Confidence 999964 334433222 22 2777787 5775 3333488888764 47777776644
No 241
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.73 E-value=1.8e-16 Score=147.85 Aligned_cols=245 Identities=17% Similarity=0.108 Sum_probs=159.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.++++++||..|.+....+ ..+|.+.+++.++++... ..|....+..+|.+.+++.+ . ..+.+++++|+++
T Consensus 47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 3588999999885433222 378999999999987643 23444445555666665554 1 2468999999999
Q ss_pred HHHHHHHHHhcC-CCCEEEecCCCCcchHHHHHHc-Cc-------E-----EEEeeccCCCCcccCHHHHHhhcC---CC
Q 021547 122 AVEIILTVITRL-GAANILLPRPGWPFYESFAKRN-HI-------E-----VRHFDLLPERGWEVDLEAVEALAD---EN 184 (311)
Q Consensus 122 a~~~~~~~l~~~-g~d~Vl~~~p~~~~~~~~~~~~-g~-------~-----~~~~~~~~~~~~~~d~~~l~~~l~---~~ 184 (311)
|++.+++..... |.++|+...+.|+++...+... +. . ...+......-...|++.+++.+. ++
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence 999999986543 3388999999999875332221 10 0 000000000000126788888764 35
Q ss_pred ccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 185 TAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+.++++......+|.+.+ .+.+++|.++|++||+++|+||+|.++.+++ . .....++..++ +.+++|.++ .|+
T Consensus 198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~-~~~~~~~~~pD---i~~~gK~l~-~G~ 271 (426)
T PRK00062 198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-G-GAQGYYGVTPD---LTTLGKIIG-GGL 271 (426)
T ss_pred EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-c-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence 556666655556888776 7889999999999999999999999874432 1 11122222222 358999986 789
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++|+++++. ++++.+.. . ...+++.++++++++.+.|+
T Consensus 272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 999998753 46776642 2 22346789999998887764
No 242
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=1.5e-15 Score=141.89 Aligned_cols=251 Identities=14% Similarity=0.124 Sum_probs=158.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|--... .--.+|.+.+++.+++.... .+.......+.+..+++.|.+..+. ..+.++++++|+
T Consensus 37 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGs 111 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQN-VGHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGS 111 (443)
T ss_pred ECCCCEEEEccccHhhcc-cCCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHH
Confidence 346889999987721111 12357899999999987432 1222112234455566666554332 225899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHH-HHHcCc------------EEEEeeccCCC--Ccc--------cCHHH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESF-AKRNHI------------EVRHFDLLPER--GWE--------VDLEA 176 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~-~~~~g~------------~~~~~~~~~~~--~~~--------~d~~~ 176 (311)
+|++.+++.... .|+.+|+.....|.+.... ....+. .+..++..... .+. -+++.
T Consensus 112 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (443)
T PRK08360 112 DANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEY 191 (443)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHH
Confidence 999998887643 4546788887777764322 221221 12222211100 000 12334
Q ss_pred HHhhcC-----CCccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 177 VEALAD-----ENTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 177 l~~~l~-----~~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
+++.+. +++.++++...+||+|..++ .+.+++|.++|++||+++|+||+|.++.+.|..+ ....++..++++
T Consensus 192 ~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii- 269 (443)
T PRK08360 192 IKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII- 269 (443)
T ss_pred HHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence 555442 35666666654799999887 5579999999999999999999999887666422 222233233444
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++||.++ +|+|+||++++. ++++.+... ...+.+.++++|+++.+.|+
T Consensus 270 --tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 318 (443)
T PRK08360 270 --TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIE 318 (443)
T ss_pred --Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHH
Confidence 6799987 899999999853 367776544 34567789999998888775
No 243
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=7.3e-16 Score=140.66 Aligned_cols=188 Identities=22% Similarity=0.207 Sum_probs=134.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeec
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDL 164 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 164 (311)
...+++++++.. ..+.++++++|+.|+.+++.+++++| |+|+++...|.+....+ ...|+++..++.
T Consensus 57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~G-d~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPG-DHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TT-BEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccC-CceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 456777777776 34679999999999999999999999 99999999998865444 447899888864
Q ss_pred cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC-CEEEEeccccCCccCCCCCCcccccC
Q 021547 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG-ILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~-~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.|++++++++++++++|++.+|.||+..+.+ +++++++|+++| +++++|++++...+ ..++. +.
T Consensus 128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL~-~G 192 (386)
T PF01053_consen 128 -------TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPLE-LG 192 (386)
T ss_dssp -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GGG-GT
T ss_pred -------hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccCc-CC
Confidence 3899999999999999999999999988887 999999999998 99999999986321 12222 21
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 308 (311)
-.|++.|++|.++..|--+|-+++.+. +.++.++++... ......+++..+.+.+-|
T Consensus 193 ---aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl 250 (386)
T PF01053_consen 193 ---ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWLLLRGL 250 (386)
T ss_dssp ----SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHHHHHHH
T ss_pred ---ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHHHhcCC
Confidence 239999999998877655444444332 124666666553 344566666666555544
No 244
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.72 E-value=9.1e-16 Score=142.73 Aligned_cols=250 Identities=17% Similarity=0.130 Sum_probs=159.3
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-... .--.+|.+.+++.+++.......+.. ...+.+..+++.+.+..+. ...+.++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGs 111 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLN-TGHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAPV-SGQAKTAFFTTGA 111 (421)
T ss_pred eCCCCEEEEccCchhhhc-CCCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEEeCChH
Confidence 345888999976632211 12357899999999987432211211 1233444566666543321 1225789999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCCccc----CHHHHHhhc
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERGWEV----DLEAVEALA 181 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~----d~~~l~~~l 181 (311)
+|++.+++.... .|..+|+....+|.+....+.. .+. .+..++..... ..+ +++.+++.+
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~ 190 (421)
T PRK09792 112 EAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLF 190 (421)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHH
Confidence 999988887753 4546888888888765432222 121 12222221111 111 246777766
Q ss_pred C-----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 182 D-----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 182 ~-----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
. ++..++++...++++|..+ +++.+++|.++|++||+++|+||++.++.+.|.. ..+..++..+. |.+++
T Consensus 191 ~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~g 266 (421)
T PRK09792 191 KSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMA 266 (421)
T ss_pred HhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEee
Confidence 4 3455666666689999865 8999999999999999999999999998777643 34444433333 56999
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
|.++ +|+|+||++++. ++++.+... ...++..++++|+++.+.|
T Consensus 267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l 311 (421)
T PRK09792 267 KSLA-GGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVL 311 (421)
T ss_pred hhhc-CCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence 9975 899999998853 356655433 3356788999999555444
No 245
>PLN02624 ornithine-delta-aminotransferase
Probab=99.72 E-value=6.8e-16 Score=145.46 Aligned_cols=239 Identities=16% Similarity=0.066 Sum_probs=154.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC-YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++..++||..|.-.. ..--.+|.+.+++.+++....... +.......++.+.+++++ + .+.++++++|++
T Consensus 73 dG~~ylD~~sg~~~~-~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGse 143 (474)
T PLN02624 73 EGKKYLDFLSAYSAV-NQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGAE 143 (474)
T ss_pred CCCEEEEcccchhcc-cCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChHH
Confidence 478888997763221 112358999999999987432211 111223344555555543 2 358999999999
Q ss_pred HHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHh
Q 021547 122 AVEIILTVITR---------LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 179 (311)
|++.+++.... ++...|+....+|.+....+...... +..++. -|++.+++
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 216 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEK 216 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHH
Confidence 99998875543 13135777777776643222221111 111211 26788888
Q ss_pred hcC---CCccEEEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 180 LAD---ENTAAIVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 180 ~l~---~~~~~i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
.++ +++.++++..++|++|.++++++ +++|.++|++||+++|+||+|.++...|... ........++++ ++|
T Consensus 217 ~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~ls 292 (474)
T PLN02624 217 IFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILG 292 (474)
T ss_pred HHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---Eec
Confidence 774 35677888888999999887664 9999999999999999999999876555422 221122222333 468
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++..++++|+++++. +++..+... ...+++.++++++++.+.|+
T Consensus 293 K~lggG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe 339 (474)
T PLN02624 293 KALGGGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQ 339 (474)
T ss_pred ccccCCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 99998779999999853 255655443 23455789999999888764
No 246
>PLN00144 acetylornithine transaminase
Probab=99.71 E-value=8.8e-16 Score=141.12 Aligned_cols=245 Identities=15% Similarity=0.091 Sum_probs=154.5
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-.. ..--.+|.+.+++.+++..... +.. ....+....+++.+.+.. ..+.|++++++++
T Consensus 12 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse 83 (382)
T PLN00144 12 VEGKEYLDMAAGIAVN-ALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE 83 (382)
T ss_pred CCCCEEEECCcCHHhc-cCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence 3688999998762111 1123578999999999874221 111 112334455666665432 2468999999999
Q ss_pred HHHHHHHHHhcC--------C------CCEEEecCCCCcchHHHHHHcCcEE-EE---eeccCCCC--cccCHHHHHhhc
Q 021547 122 AVEIILTVITRL--------G------AANILLPRPGWPFYESFAKRNHIEV-RH---FDLLPERG--WEVDLEAVEALA 181 (311)
Q Consensus 122 a~~~~~~~l~~~--------g------~d~Vl~~~p~~~~~~~~~~~~g~~~-~~---~~~~~~~~--~~~d~~~l~~~l 181 (311)
|++.+++..... + ..+|+....+|.+....+....... .. .+..+... ..-|++.+++.+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 163 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence 999888866421 0 1578888888877543333222110 00 00000000 012688898887
Q ss_pred CC-CccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccC
Q 021547 182 DE-NTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 182 ~~-~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~ 258 (311)
.. ++.++++...+||.|... +.+.+++|.++|++||+++|+||+|.++...|..+.. ...+.+ + |.++||.+
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~P--D---i~t~sK~l 238 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEP--D---IMTLAKPL 238 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCC--C---EEEecccc
Confidence 54 455555554478844432 4444999999999999999999999998776653221 223332 3 66999996
Q ss_pred CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
.+|+|+||++++. ++++.+... ...++..++++++++.+.|
T Consensus 239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l 280 (382)
T PLN00144 239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVL 280 (382)
T ss_pred -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHH
Confidence 5799999999864 366666543 3456788999999998433
No 247
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.71 E-value=1.5e-15 Score=140.44 Aligned_cols=205 Identities=15% Similarity=0.152 Sum_probs=140.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhc---CCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITR---LGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~---~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
...+.+.+.+.+.+..|.. ..+..++++|+| .++.+++.++.. +| |.|+++.-+|......+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~g-d~VI~p~~th~S~~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKA-KYVIWPRIDQKSCIKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCC-CEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence 4566666666666655643 124588888888 577777777752 57 99999999999999999999999999996
Q ss_pred -cCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547 165 -LPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 165 -~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
...+++.+|++.|++++++ +.+++++.+|+ |+.....+++++|.++|++||+++|+|++|+.....-..... .
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~ 257 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-K 257 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-c
Confidence 3456789999999999875 45666666665 444344556999999999999999999999963211000000 1
Q ss_pred ccCCCCCeEEEecCcccCCCCcceeeEEE-eeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547 241 VFGSIVPVITLGSISKRWIVPGWRFGWLA-TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 308 (311)
......-.+++.|++|.+.+||. |+++ +.++ ++++.+...+. ....+.++|.+.+.++
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~-------el~~~i~~~y~-g~~~~s~~~~~~~~ll 316 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDE-------NFIQEISKSYP-GRASASPSLDVLITLL 316 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCC--EEEEEECCH-------HHHHHHHHhcc-CCCCChHHHHHHHHHH
Confidence 11110114778899999988877 5655 5443 46677665533 2234456677666555
No 248
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.71 E-value=1.2e-15 Score=141.33 Aligned_cols=239 Identities=15% Similarity=0.081 Sum_probs=154.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++++++||..|.... ..--.+|.+.+++.+.++..... ......-..++.+.+++++ | .+.++++++|++
T Consensus 35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccHH
Confidence 578889998863221 11124799999999987642210 1001122344555555444 3 358999999999
Q ss_pred HHHHHHHHHhc---------CCCCEEEecCCCCcch-HHHHHHcCc------------EEEEeeccCCCCcccCHHHHHh
Q 021547 122 AVEIILTVITR---------LGAANILLPRPGWPFY-ESFAKRNHI------------EVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
|++.++..+.. +|.+.|+.....|.+. ...+...+. ++..++. .|++.|++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 99999988632 3436788888877653 333333221 1222221 26788888
Q ss_pred hcC---CCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 180 LAD---ENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 180 ~l~---~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
.++ ++..++++..+++++|...+++ .+++|.++|++||+++|+||+|.++.+.|..+ ........++++ +++
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g 254 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG 254 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence 774 3566777777799999988644 69999999999999999999998776666432 222122222333 467
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++..++|+|+++++. ++++.++.. ...+.+.++++|+++.+.|+
T Consensus 255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99987779999999753 366666542 33455678899988887764
No 249
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=2.2e-15 Score=140.06 Aligned_cols=158 Identities=20% Similarity=0.167 Sum_probs=123.2
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 163 (311)
....+++.++++++ .+..+++++++.|+.+++.++.++| |+|+++...|.+.. ..++..|++++.++
T Consensus 70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~G-d~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (437)
T PRK05613 70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAG-DHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE 140 (437)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCC-CEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence 45677777877773 2345555555688888888888999 99999999998763 45577899999886
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.+ .|++.+++.+++++++|++.++.||+|.+.+ +++|.++|+++|+++|+|.+++... ...++ .+
T Consensus 141 -~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~----~~~p~-~~- 205 (437)
T PRK05613 141 -NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-EL- 205 (437)
T ss_pred -CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc----ccChH-Hh-
Confidence 22 2789999999999999999999999999988 9999999999999999999987522 11122 11
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+-.+++.|++|.++.+|.-+|-+++.
T Consensus 206 --GaDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 206 --GADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred --CCCEEEeeccceecCCCcceeEEEEe
Confidence 12399999999998888777776663
No 250
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.70 E-value=1.3e-15 Score=141.72 Aligned_cols=250 Identities=20% Similarity=0.144 Sum_probs=153.9
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-... .--.+|.+.+++.+++.......+.. ...+.+..+++.+.+..+ ....+.++++++|++
T Consensus 30 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse 105 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLN-IGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE 105 (420)
T ss_pred CCCCEEEECccCHHhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence 35889999987732211 12357899999999987533222211 112234445555544322 112357999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCC---------cccCHHHH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERG---------WEVDLEAV 177 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~---------~~~d~~~l 177 (311)
|++.+++.... .|+.+|+....+|.+....+... +. .+..++...... +.-+++.+
T Consensus 106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (420)
T TIGR00700 106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA 185 (420)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence 99988887643 34467888888887654332221 11 112222110000 00124456
Q ss_pred HhhcC-----CCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEE
Q 021547 178 EALAD-----ENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITL 251 (311)
Q Consensus 178 ~~~l~-----~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i 251 (311)
++.+. ++..++++......+|..++.+ .+++|.++|++||+++|+||+|.++.+.|. ...+..++..++ +
T Consensus 186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~pD---i 261 (420)
T TIGR00700 186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPEPD---L 261 (420)
T ss_pred HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCCCC---E
Confidence 65542 3445555555567788866544 499999999999999999999999877664 222233322223 4
Q ss_pred ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
.++||.++ +|+|+||++++. ++++.+... ...+++.++++|+++.+.|
T Consensus 262 ~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 310 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVL 310 (420)
T ss_pred EEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHH
Confidence 46999987 899999999853 466666533 3456788999999996655
No 251
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.69 E-value=2.9e-15 Score=140.65 Aligned_cols=252 Identities=17% Similarity=0.124 Sum_probs=154.5
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|--... .--.+|.+.+++.++++...... ......+.+..+++.+....+.. ..+.++++++|+
T Consensus 50 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGs 125 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTIN-VGHSHPKVKEALHKQVDQYIHTG--FNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGA 125 (451)
T ss_pred eCCCCEEEEcCCchhhcC-CCCCCHHHHHHHHHHHHhccCcc--ccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcH
Confidence 335888999987732211 12357889999999987432111 11112344555666665543211 125899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC--CcccC--------HH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER--GWEVD--------LE 175 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~~d--------~~ 175 (311)
+|++.+++.... .|+.+|+....+|.+....+... +. .+..+|..... ...+. ++
T Consensus 126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (451)
T PRK06918 126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIE 205 (451)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHH
Confidence 999998887643 34467888888887754333221 10 11222211100 00111 12
Q ss_pred HHHhhc----CCCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 176 AVEALA----DENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 176 ~l~~~l----~~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
.+++.+ ..+..+.+|.-| +...|.++ +.+.+++|.++|++||+++|+||+|.++.+.|. +.++..++..++
T Consensus 206 ~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~-~~a~~~~~v~pD-- 282 (451)
T PRK06918 206 EFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK-YFAIEHFDVVPD-- 282 (451)
T ss_pred HHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc-eehhHhcCCCCC--
Confidence 233322 234455555666 44457645 555599999999999999999999999877664 334444443333
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+.++||.++ +|+|+||++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 283 -i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 283 -LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLD 333 (451)
T ss_pred -EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHH
Confidence 448999987 899999999853 366666543 34567899999999666553
No 252
>PRK04311 selenocysteine synthase; Provisional
Probab=99.69 E-value=7.5e-15 Score=137.03 Aligned_cols=210 Identities=17% Similarity=0.150 Sum_probs=143.1
Q ss_pred cCCCCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC--cHHHHHHHHHHHhhcCCCCCCCCCE
Q 021547 41 KNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM---FG--LPLARRAVAEYLNRDLPYKLSADDI 113 (311)
Q Consensus 41 ~~~~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~l~~~~g~~~~~~~v 113 (311)
+.+-+.+||-... .-.. ...+.++.+.+++.+.+.+.....|.-. .| +..+++.+++++ ..++.
T Consensus 75 ~~~lr~vinatg~v~~tNl-g~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a 145 (464)
T PRK04311 75 RPSLRPVINATGVVLHTNL-GRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDA 145 (464)
T ss_pred cCCCcceecCCccEEeccC-CCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeE
Confidence 3345777775543 1111 1245778999999988764321122211 12 256778888877 33467
Q ss_pred EEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 114 YITLGCMEAVEIILTVITRLGAANILLPRPGWPF------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+++++++.|+.+++.++ .+| |+|++++..+.. +...++..|++++.++... ..+++++++++++++++
T Consensus 146 ~vv~sgtaAl~l~l~~l-~~G-deVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~Tkl 219 (464)
T PRK04311 146 LVVNNNAAAVLLALNAL-AAG-KEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTAL 219 (464)
T ss_pred EEECCHHHHHHHHHHHh-CCC-CEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeE
Confidence 88888899999888765 788 999999764432 2346678899999887532 35789999999999999
Q ss_pred EEEeCCCCC--Cc--cCCCHHHHHHHHHHHHHhCCEEEEeccccCCc----cC-CCCCCcccccCCCCCeEEEecCcccC
Q 021547 188 IVIINPCNP--CG--NVLTYQHLQKIAETARKLGILVIADEVYGHLA----FG-STPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 188 i~i~~p~np--tG--~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~----~~-~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
+++++++|+ +| ...+ +++|+++|++||+++++|.+.+.+. |+ ...+ .+......+..++++|.+|.+
T Consensus 220 V~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg~K~L 295 (464)
T PRK04311 220 LLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSGDKLL 295 (464)
T ss_pred EEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecCcccc
Confidence 999999998 34 4556 9999999999999999999755431 11 0111 111111223449999999998
Q ss_pred CCCcceeeEEEee
Q 021547 259 IVPGWRFGWLATN 271 (311)
Q Consensus 259 ~~~G~r~G~i~~~ 271 (311)
+.| ..|++++.
T Consensus 296 gGp--~~G~i~g~ 306 (464)
T PRK04311 296 GGP--QAGIIVGK 306 (464)
T ss_pred cCC--ceEEEEEc
Confidence 766 47888774
No 253
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=2.5e-15 Score=139.80 Aligned_cols=252 Identities=17% Similarity=0.107 Sum_probs=159.3
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-... .--.+|.+.+++.+++.......+.. ...+.+..+++.+....+. -..+.++++++|+
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGs 111 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGA 111 (421)
T ss_pred eCCCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcH
Confidence 345889999977621111 12357889999999987532212211 1122334455555543221 1235899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCcE-------------EEEeeccCCCC---cccCHHHHHhhcC
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHIE-------------VRHFDLLPERG---WEVDLEAVEALAD 182 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~---~~~d~~~l~~~l~ 182 (311)
+|++.+++.... .|+.+|+....+|.+....+.. .+.. +..++...... ...+++.+++.+.
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 112 EAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHH
Confidence 999988887643 4446788888888776443332 1210 11111110000 0113556776653
Q ss_pred -----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547 183 -----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256 (311)
Q Consensus 183 -----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 256 (311)
++..++++....+..|. .++++.+++|.++|++||+++|+||+|.++.+.|. +.....++..++++ ++||
T Consensus 192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~~~~~~pDiv---~~sK 267 (421)
T PRK06777 192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK-LFAMEYYDVKPDLI---TMAK 267 (421)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc-hhhhhhcCCCCCEE---eeeh
Confidence 23445555555777886 57899999999999999999999999998877664 33334443333433 7999
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++ +|+|+||++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 268 ~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 268 SLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred hhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 987 899999999853 366666543 33567889999999998875
No 254
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-15 Score=132.39 Aligned_cols=212 Identities=13% Similarity=0.105 Sum_probs=149.8
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~ 127 (311)
++|...+ ...+.|++.++|..+... ....|+.++-...+.+.+++.+ | ...++++++||++..+++
T Consensus 2 ~~f~SDn-----~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~----g----~~a~~Fv~sGT~aN~lal 67 (342)
T COG2008 2 IDFRSDN-----VAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF----G----KEAALFVPSGTQANQLAL 67 (342)
T ss_pred CccccCc-----cCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh----C----CceEEEecCccHHHHHHH
Confidence 4555554 246789999999887643 2336877665566666666666 2 378999999999999999
Q ss_pred HHHhcCCCCEEEecCCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCcc
Q 021547 128 TVITRLGAANILLPRPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGN 199 (311)
Q Consensus 128 ~~l~~~g~d~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~ 199 (311)
.+.+++| +.|++..-.|....+ ..+..+ ...++++.+..++.++++++++.+.. .++++++.+.+|..|.
T Consensus 68 ~~~~~~~-~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt 145 (342)
T COG2008 68 AAHCQPG-ESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT 145 (342)
T ss_pred HHhcCCC-CeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCce
Confidence 9999999 999999888864322 223333 33444555667789999999997653 3566677777778899
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccC--CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGH--LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
++|.+++++|.++|+++|+.|+.|.+--. +...+.+...... .. .++..++||..++|+ |.|++.+.+
T Consensus 146 Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~-D~v~~~~tK~g~~~~---gAiv~gn~~--- 215 (342)
T COG2008 146 VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKS---YV-DSVSFCLTKGGGAPV---GAIVFGNRD--- 215 (342)
T ss_pred ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHh---hC-CEEEEecccCCccee---eeEEEcCHH---
Confidence 99999999999999999999999998653 2222322112221 11 256669999966555 999987754
Q ss_pred chhhHHHHHhhh
Q 021547 278 QKSGIVGSIKAC 289 (311)
Q Consensus 278 ~~~~~~~~~~~~ 289 (311)
++++++..
T Consensus 216 ----~~~~a~~~ 223 (342)
T COG2008 216 ----FAKRARRW 223 (342)
T ss_pred ----HHHHHHHH
Confidence 66665544
No 255
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.68 E-value=6.2e-15 Score=136.88 Aligned_cols=197 Identities=15% Similarity=0.102 Sum_probs=134.7
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc---CCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS---SMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~---~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+.++.|+++.- .+.|+.+.+++.+.+.. +.. ..+....+...+.+.+.+ + +.+ ++.+++|++|+|+|
T Consensus 26 ~~~iyld~~a~-----g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t 96 (406)
T TIGR01814 26 NAVIYLDGNSL-----GLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT 96 (406)
T ss_pred CCcEEecCCCc-----CcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence 67899998872 24578888888776542 110 011101121222222222 1 223 35788999999999
Q ss_pred HHHHHHHHHHhcCC--CCEEEecCCCCcchH----HHHHHcCcEE----EEeeccCCCCcccCHHHHHhhc---CCCccE
Q 021547 121 EAVEIILTVITRLG--AANILLPRPGWPFYE----SFAKRNHIEV----RHFDLLPERGWEVDLEAVEALA---DENTAA 187 (311)
Q Consensus 121 ~a~~~~~~~l~~~g--~d~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~l---~~~~~~ 187 (311)
++++.++.++.+++ .+.|++....|+... ..++..|+++ +.++. ..++.++++.+++.+ .+++++
T Consensus 97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence 99999999986554 136888889998732 3456678776 34433 334567888888876 468999
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCc
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPG 262 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G 262 (311)
+++++++|.||..++ +++|.++|+++|+++++|++++. |.-+..+..+ +..+++.|.+|+++ .||
T Consensus 175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~---gvD~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDW---GVDFACWCTYKYLNAGPG 240 (406)
T ss_pred EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccC---CCCEEEEcCccccCCCCC
Confidence 999999999999999 99999999999999999999996 2222233222 23489999999864 455
No 256
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.67 E-value=6.6e-15 Score=131.71 Aligned_cols=188 Identities=20% Similarity=0.158 Sum_probs=145.8
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 163 (311)
....+.+.+++.. ...++++.++|..|+..++..|+.+| +.|++....|.+... .....|.+...++
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g-~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd 148 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAG-DHIVATGDVYGGTLRILRKFLPKFGGEGDFVD 148 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCC-CcEEEeCCCcccHHHHHHHHHHHhCceeeeec
Confidence 4456677777766 44568999999999999999999999 999999999987644 5556777877776
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
+. +++.++++++++++++++.+|.||+..+.+ ++++.++|+++|+++|+|++++...+- .+.++ .
T Consensus 149 ~~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~--~pL~l---G 213 (409)
T KOG0053|consen 149 VD-------DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ--DPLPL---G 213 (409)
T ss_pred hh-------hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc--Chhhc---C
Confidence 53 778899999999999999999999999988 999999999999999999999975321 12222 2
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
. .|+++|.+|.++..+-=+|-+++.+. +++.++++..+. ..++.+|+......+-+
T Consensus 214 A---DIV~hSaTKyi~Ghsdvi~G~iv~n~------~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl 270 (409)
T KOG0053|consen 214 A---DIVVHSATKYIGGHSDVIGGSVVLNS------EELASRLKFLQEDLGWCEDPFDLFLLSRGL 270 (409)
T ss_pred C---CEEEEeeeeeecCCcceeeeEEecCc------HHHHHHHHHHHHHhcCCCCHHHHHHHhcCc
Confidence 2 29999999999998765555555432 358888887744 66788887666554433
No 257
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=5.5e-15 Score=135.20 Aligned_cols=198 Identities=18% Similarity=0.162 Sum_probs=145.7
Q ss_pred HHHHHH-HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC
Q 021547 65 AVAEDA-IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRP 143 (311)
Q Consensus 65 ~~~~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p 143 (311)
+++.++ +..++..++ .|..++.+.+|++++++++ ..++++.|++++.|+++++...+++| |.| +.+
T Consensus 50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pG-DeV--psn 116 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPG-DYV--PGN 116 (450)
T ss_pred HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCc-CEE--CCc
Confidence 667777 666665554 5998889999999999999 45689999999999998887778999 977 667
Q ss_pred CCcch-HHHHHHcCcEEEEeecc--------CCCCcccCHHHHHhhcCC----CccEEEEeCCCC-CCccCCCHHHHHHH
Q 021547 144 GWPFY-ESFAKRNHIEVRHFDLL--------PERGWEVDLEAVEALADE----NTAAIVIINPCN-PCGNVLTYQHLQKI 209 (311)
Q Consensus 144 ~~~~~-~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~n-ptG~~~~~~~l~~l 209 (311)
.|... ...++..|..++.++.+ ...++.+|++.+++.+++ +++++.+.+++| ..|..+|.++++++
T Consensus 117 ~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I 196 (450)
T TIGR02618 117 MYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREV 196 (450)
T ss_pred eeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHH
Confidence 77444 44478888866666432 124578999999999875 345677888877 55899999999999
Q ss_pred HHHHHHhCCEEEEeccccC--Cc--------cCCCCC----CcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCC
Q 021547 210 AETARKLGILVIADEVYGH--LA--------FGSTPY----IPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPN 274 (311)
Q Consensus 210 ~~l~~~~~~~li~D~ay~~--~~--------~~~~~~----~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~ 274 (311)
.++|++||+.||.|.++.. .. |.+.+. ..+..+.+ ....|..|.++.| | |+++..++
T Consensus 197 ~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d~- 268 (450)
T TIGR02618 197 RELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMNDD- 268 (450)
T ss_pred HHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCCH-
Confidence 9999999999999999975 11 222222 01112221 5788999997776 5 66665664
Q ss_pred CccchhhHHHHHhhh
Q 021547 275 GVLQKSGIVGSIKAC 289 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~ 289 (311)
++.++++..
T Consensus 269 ------~l~~k~r~~ 277 (450)
T TIGR02618 269 ------EMFQSAKEL 277 (450)
T ss_pred ------HHHHHHHHH
Confidence 377776665
No 258
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=3.9e-15 Score=132.76 Aligned_cols=240 Identities=20% Similarity=0.205 Sum_probs=167.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
+.+++.+|||..|.-.. ..--++|.+.++++++.+.-. .+.|. .+.+..+++.|.+..+ ..+.|+++++
T Consensus 38 D~~G~~YlDf~~Giav~-~lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NS 108 (404)
T COG4992 38 DQQGREYLDFAAGIAVN-NLGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNS 108 (404)
T ss_pred CCCCCEeeeeccceeee-ccCCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEEcCC
Confidence 34689999999884322 123478999999999876321 11222 2356666666665322 3789999999
Q ss_pred hHHHHHHHHHHHhcCC----CCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHhhc
Q 021547 119 CMEAVEIILTVITRLG----AANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g----~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
+++|+++++..-.+.+ +.+|+.....|++--...-..+- .+..+|. -|.+.+++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence 9999999998876432 34888887777642111111111 1222222 2889999999
Q ss_pred CCCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC
Q 021547 182 DENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV 260 (311)
Q Consensus 182 ~~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 260 (311)
++++.++++...+-..|+..+++ .++++-++|++||+++|.||++.++..+|+ +.....+.-.++++ ++.|.+|
T Consensus 182 ~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk-~fA~e~~gV~PDI~---tlaK~Lg- 256 (404)
T COG4992 182 DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK-LFAYEHYGVEPDIL---TLAKALG- 256 (404)
T ss_pred ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch-HHHHHHhCCCCCEE---Eeecccc-
Confidence 99999999999999999977555 499999999999999999999999887774 33334444444455 7899965
Q ss_pred CcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 261 PGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 261 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
.|+++|.+++.. .+.+.+..- .+.+++.||++.+++.+.|+
T Consensus 257 GG~PigA~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~ 298 (404)
T COG4992 257 GGFPIGAMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLE 298 (404)
T ss_pred CCccceeeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHH
Confidence 579999999852 133444444 44678999999999887764
No 259
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.66 E-value=1.6e-14 Score=130.56 Aligned_cols=190 Identities=21% Similarity=0.171 Sum_probs=142.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~ 162 (311)
+....|.++++++- ..++.+.+++|+.|+..++.+++++| |+|+++...|.+.. ...+..|+++..+
T Consensus 63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~G-D~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAG-DHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCC-CEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 45567777777776 56789999999999999999999999 99999999998654 4556788888877
Q ss_pred eccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 163 DLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
+. .+.+.+++.+. +++++|++.+|.||+-.+.+ +.+|+++|+++|+++|+|++|..-.+- .+..+
T Consensus 134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q--~PL~~-- 199 (396)
T COG0626 134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ--RPLEL-- 199 (396)
T ss_pred CC-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc--Chhhc--
Confidence 54 25556666666 59999999999999988887 999999999999999999999974332 12222
Q ss_pred cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-h-ccccCCCchhHHHHHhhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-L-GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~q~~~~~~l~ 309 (311)
. -.|+++|.+|.++..+-=+|-+++.+.+ .+.+.+... . ......+|+..+.+.+-|+
T Consensus 200 -G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~------~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk 259 (396)
T COG0626 200 -G---ADIVVHSATKYLGGHSDVLGGVVLTPNE------ELYELLFFAQRANTGAVLSPFDAWLLLRGLR 259 (396)
T ss_pred -C---CCEEEEeccccccCCcceeeeEEecChH------HHHHHHHHHHHhhcCCCCCHHHHHHHHhccc
Confidence 1 2399999999999987555555543332 355655222 2 3566778887777766554
No 260
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.65 E-value=3.2e-14 Score=132.51 Aligned_cols=193 Identities=18% Similarity=0.132 Sum_probs=134.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-----CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCC
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPM-----FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGA 135 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~ 135 (311)
.+.++.+.+++.+.+.......|.-. .-+..+++.++++++ .+..+++++++.|+.+++.+ +.+|
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~G- 160 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKG- 160 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCc-
Confidence 45689999999988874321122211 113678888888883 34466778888899888865 4789
Q ss_pred CEEEecCCCCcc------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC--c--cCCCHHH
Q 021547 136 ANILLPRPGWPF------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC--G--NVLTYQH 205 (311)
Q Consensus 136 d~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt--G--~~~~~~~ 205 (311)
|+|++++..|.. +...++..|++++.++... ..++++++++++++++++++.+++|++ | ...+
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d--- 233 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS--- 233 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---
Confidence 999999876532 2356778899999886531 257899999999999999999999985 6 3566
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCccC---CCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAFG---STPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~~---~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++|+++|+++|+++++|.+.+.+.-. +-+..+ +......+-.++++|.+|.++.| ..|++++..
T Consensus 234 l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~ 302 (454)
T TIGR00474 234 IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK 302 (454)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH
Confidence 999999999999999999875543110 001111 11111223349999999998766 478888753
No 261
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.64 E-value=2e-14 Score=125.50 Aligned_cols=165 Identities=23% Similarity=0.170 Sum_probs=135.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+....|+++|+.+-.. -.-+.+.+++.|+..++..++++| |.|+-.+--|.+. ...++.+|+++.++
T Consensus 62 PT~~vlE~RiAaLEGG--------~aa~a~aSG~AA~~~ai~~la~aG-D~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv 132 (426)
T COG2873 62 PTTDVLEERIAALEGG--------VAALAVASGQAAITYAILNLAGAG-DNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV 132 (426)
T ss_pred chHHHHHHHHHHhhcc--------hhhhhhccchHHHHHHHHHhccCC-CeeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence 4567788888877632 234556777999999999999999 9999998888753 45678899999998
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+. .|++.+++++++++|++++.+..||.+.+.+ ++++.++|+++++++|+|+.++.-.+ ..|+.
T Consensus 133 d~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl----~rP~~-- 196 (426)
T COG2873 133 DP-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYL----CRPIE-- 196 (426)
T ss_pred CC-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCccee----cchhh--
Confidence 64 2789999999999999999999999999998 99999999999999999999986211 12222
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
.+-.|+++|+||+.|..|.-+|-+++..-..+|.
T Consensus 197 --hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~ 230 (426)
T COG2873 197 --HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWT 230 (426)
T ss_pred --cCCCEEEEeecccccCCccccceEEEeCCccccc
Confidence 2233999999999999999999999987776665
No 262
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.64 E-value=7e-14 Score=129.94 Aligned_cols=216 Identities=16% Similarity=0.035 Sum_probs=137.9
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHH-hcCCC----CC-CCCCCCcHHHHH---
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSV-RSSMF----NC-YAPMFGLPLARR--- 94 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~-~~~~~----~~-Y~~~~g~~~lr~--- 94 (311)
...+|++++++-..+ ....+++--.+ -..+|.+++++...+ ..... .+ |...+...+|++
T Consensus 12 ~~~~~~~~~~~~~~~-----~~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~ 80 (416)
T PRK13034 12 YDDEVFAAINKELER-----QQDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAI 80 (416)
T ss_pred hCHHHHHHHHHHHHH-----HhcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHH
Confidence 557788888753322 34566665554 134899999998885 32110 01 111234566776
Q ss_pred -HHHHHHhhcCCCCCCCCCEE-EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch-HHHHHH--cCcEE--EEeeccCC
Q 021547 95 -AVAEYLNRDLPYKLSADDIY-ITLGCMEAVEIILTVITRLGAANILLPRPGWPFY-ESFAKR--NHIEV--RHFDLLPE 167 (311)
Q Consensus 95 -~ia~~l~~~~g~~~~~~~v~-~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~-~~~~~~--~g~~~--~~~~~~~~ 167 (311)
.++++++ .+..+ .+++|+.|+..++.+++++| |+|+++...|.+. ...++. .+... ..++++.
T Consensus 81 ~~la~l~g--------~~~alv~~~SG~~A~~~~l~al~~~G-D~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 150 (416)
T PRK13034 81 ERAKQLFG--------CDYANVQPHSGSQANGAVYLALLKPG-DTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR- 150 (416)
T ss_pred HHHHHHhC--------CCceEEecCCcHHHHHHHHHHhcCCC-CEEEEcCccceeeeecCCcceeccceeeeEEccccc-
Confidence 7777763 23554 46788999999999999999 9999999998762 222221 11111 2333322
Q ss_pred CCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCC
Q 021547 168 RGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSI 245 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~ 245 (311)
.++.+|++++++.++. ++++|++..+. +|...+ +.+|.++|+++|+++++|++|+...+ .|....++.
T Consensus 151 ~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~----- 220 (416)
T PRK13034 151 LTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFP----- 220 (416)
T ss_pred ccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCC-----
Confidence 2456899999988743 67777765554 455556 88889999999999999999986443 232222221
Q ss_pred CCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 246 VPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
...++++|++|+++.+. -|++++.+
T Consensus 221 ~~Di~~~s~~K~l~g~~--GG~v~~~~ 245 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPR--GGMILTND 245 (416)
T ss_pred CceEEEEeCcccCCCCC--CeEEEECc
Confidence 13489999999974432 27776644
No 263
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=2.6e-14 Score=130.75 Aligned_cols=183 Identities=16% Similarity=0.127 Sum_probs=127.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~ 162 (311)
+...+|++.++++. ..+..+++++++.|+.+++.++.++| |+|+++.+.|.+. ...+...|++++.+
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~G-D~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv 134 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKG-KRILSISDLYGQTFYFFNKVLKTLGIHVDYI 134 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEecCccchHHHHHHHHHHhcCcEEEEE
Confidence 45677888888887 34568888888999999999999999 9999988766544 36677899999999
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
++.+.+.+.++ .++++++++.+|+||++.+.+ +++|.++|++++ +++|.+++.- +.+. ++..
T Consensus 135 d~~~~~~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~---pl~~- 196 (384)
T PRK06434 135 DTDRLNSLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQN---PLDL- 196 (384)
T ss_pred CCCChhheeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCC---chhc-
Confidence 87432222211 136899999999999999877 999999999998 4679998642 2222 2221
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHh
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMF 306 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~ 306 (311)
+-.++++|.+|.++.+| .-.|.+++.++ ++.++++... ......+++..+.+.+
T Consensus 197 ---gaDivv~S~tK~i~G~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~A~l~~~ 252 (384)
T PRK06434 197 ---GADVVIHSATKYISGHSDVVMGVAGTNNK-------SIFNNLVERRKTLGSNPDPIQAYLALR 252 (384)
T ss_pred ---CCCEEEeecccccCCCCCceEEEEecCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 12389999999988766 44455555443 3556655442 3344556664444333
No 264
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=3.2e-14 Score=133.09 Aligned_cols=250 Identities=18% Similarity=0.091 Sum_probs=152.0
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|--.... --.+|.+.+++.+++.......... -..+....+++.|.+..+ -..+.++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGse 114 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANV-GHRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEITP--GGLDCFFFSNSGAE 114 (433)
T ss_pred CCCCEEEECCcchhhccC-CCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence 357889999877321111 2367889999999986422111000 112334445555544331 13467999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC--c-----------EEEEeeccCCCC--cc--------cCHHH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH--I-----------EVRHFDLLPERG--WE--------VDLEA 176 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g--~-----------~~~~~~~~~~~~--~~--------~d~~~ 176 (311)
|++.+++.... .|+.+|+.....|.+...... ..+ . .+..+|...... .. -+++.
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (433)
T PRK08117 115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD 194 (433)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence 99998886432 343678888877776443321 111 0 112222211000 00 14455
Q ss_pred HHhhcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 177 VEALAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 177 l~~~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
+++.++ .+..++++.......|.. .+++.+++|.++|++||+++|+||+|.++...|..+. ...++.. .-
T Consensus 195 l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~---pD 270 (433)
T PRK08117 195 LESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV---PD 270 (433)
T ss_pred HHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---CC
Confidence 666543 234444555446666775 4788899999999999999999999998766664322 1222222 22
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+.+++|.++ +|+++|++++.. ++++.+... ...+.+.++++++++.+.|+
T Consensus 271 i~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 271 IMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred Eeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 469999987 799999998853 366665443 33456789999999888775
No 265
>PRK02769 histidine decarboxylase; Provisional
Probab=99.63 E-value=1e-13 Score=126.89 Aligned_cols=173 Identities=16% Similarity=0.092 Sum_probs=128.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 166 (311)
..++.+.+.+++.+.+|.+-.....++|+|+|+++..++.... .++ +.|+++.-.|.+....++..|.+...++..
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~-~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~- 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPD-GTLYYSKDTHYSVSKIARLLRIKSRVITSL- 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCC-cEEEeCCCceehHHHHHHHcCCCCceeccC-
Confidence 4566666666666656543211124889999999876655443 467 899999999999999999999998888875
Q ss_pred CCCcccCHHHHHhhcCCC---ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC---CEEEEeccccCCccC---CCCCC
Q 021547 167 ERGWEVDLEAVEALADEN---TAAIVIINPCNPCGNVLTYQHLQKIAETARKLG---ILVIADEVYGHLAFG---STPYI 237 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~---~~li~D~ay~~~~~~---~~~~~ 237 (311)
.++.+|+++|++.++++ +.+++++.++|++|.+.| +++|.++|+++| +++++|.+|+.+... ..+..
T Consensus 141 -~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 141 -PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence 35679999999988775 888899999999999999 899999999998 699999999974321 11111
Q ss_pred cccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
.+. . +-..+..|.+|.++.| ..+|.+++.+
T Consensus 217 d~~---~-~vDsis~s~HK~~~~P-~g~G~l~~r~ 246 (380)
T PRK02769 217 SFA---D-GIDSIAISGHKFIGSP-MPCGIVLAKK 246 (380)
T ss_pred Ccc---C-CCCEEEECCcccCCCC-CCcEEEEEeh
Confidence 221 1 2336777999986533 5688888864
No 266
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=4.8e-14 Score=131.18 Aligned_cols=250 Identities=19% Similarity=0.134 Sum_probs=154.0
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|--... .--.+|.+.+++.+++..... +.......+.+..+++.+.+..+.+ ..+.++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGs 111 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVN-TGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGA 111 (425)
T ss_pred eCCCCEEEEccccHHhhc-cCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchH
Confidence 345889999987732111 123678899999999874321 1111111234444556565433211 125899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCCcccC----HHHHHhhc
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERGWEVD----LEAVEALA 181 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~l 181 (311)
+|++.+++.... .|+.+|+.....|.+....... .+. .+..++..... .+++ ++.+++.+
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~ 190 (425)
T PRK07495 112 EAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLF 190 (425)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHH
Confidence 999998887643 4446899888888765432221 110 12333322111 1122 34456654
Q ss_pred C-----CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 182 D-----ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 182 ~-----~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
. ++..++++......+| ..+|++.+++|.++|++||+++|+||+|.++...|.. ..+.. .+.+..|.++|
T Consensus 191 ~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~---~gv~pDi~tls 266 (425)
T PRK07495 191 KADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEH---HEVAADLTTMA 266 (425)
T ss_pred HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecc---cCCCCCEEeeh
Confidence 3 2344555554443477 4579999999999999999999999999987666642 22222 22334567999
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 308 (311)
|.++ +|+|+|+++++. ++++.+... ...+++.++++++++.+.|
T Consensus 267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 311 (425)
T PRK07495 267 KGLA-GGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVL 311 (425)
T ss_pred hhhc-CCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence 9975 799999999853 356655443 3456788999999655554
No 267
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.63 E-value=1.4e-15 Score=133.90 Aligned_cols=192 Identities=15% Similarity=0.119 Sum_probs=139.6
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
+.|++.++|.+....+. .|..+....++++.+++++ ..+..+++++||.+..++++++++++ +.|++..
T Consensus 7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~-~~vi~~~ 75 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPG-ESVICAD 75 (290)
T ss_dssp S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcC-Cceeccc
Confidence 56889999966655443 6988888899999999999 44567899999999999999999999 9999999
Q ss_pred CCCcch---HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCC-CccCCCHHHHHHHHHH
Q 021547 143 PGWPFY---ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP-CGNVLTYQHLQKIAET 212 (311)
Q Consensus 143 p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~np-tG~~~~~~~l~~l~~l 212 (311)
+.|... .......|.+++.++.. +++.+++++|++.+.. ++++|++++|+|. .|.+++.+++++|.++
T Consensus 76 ~aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~ 153 (290)
T PF01212_consen 76 TAHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISEL 153 (290)
T ss_dssp TEHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHH
T ss_pred cceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHH
Confidence 987633 23446699999988753 3268999999998754 5788999999875 5899999999999999
Q ss_pred HHHhCCEEEEeccccC--CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 213 ARKLGILVIADEVYGH--LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 213 ~~~~~~~li~D~ay~~--~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
|++||+.++.|.+--. ....+.++..+..+ -+ ++..|++|..++++ |.+++-+++
T Consensus 154 a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~---~D-~v~~~~tK~~g~~~---Gavl~~~~~ 210 (290)
T PF01212_consen 154 AREHGLPLHMDGARLANAAAALGVSLAEIAAG---AD-SVSFGGTKNGGAPG---GAVLAGNKE 210 (290)
T ss_dssp HHHHT-EEEEEETTHHHHHCHHHHHHHHHHTT---SS-EEEEETTSTT-SSS---EEEEEESHH
T ss_pred HHhCceEEEEehhhHHHhhhcccccHHHHhhh---CC-EEEEEEEccccccc---ceEEEechH
Confidence 9999999999999532 11111122222221 12 55559999987776 777776543
No 268
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.63 E-value=2.8e-15 Score=136.57 Aligned_cols=175 Identities=17% Similarity=0.199 Sum_probs=123.6
Q ss_pred CCCCCCC-cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547 82 CYAPMFG-LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160 (311)
Q Consensus 82 ~Y~~~~g-~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~ 160 (311)
+...+.| +.+.++..|+.+.. ....++++|+|.++.+++.+++++| |+||+++.+|.+....+...|+.++
T Consensus 60 ~L~~p~G~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~g-d~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 60 DLHDPEGIIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPG-DKVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp BTTTTBTHHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTT-CEEEEETT--HHHHHHHHHHTEEEE
T ss_pred cccCCccHHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCC-CEEEEcCCcHHHHHHHHHHcCCeEE
Confidence 3444444 45777778888743 3467889999999999999999999 9999999999999999999999999
Q ss_pred EeeccCCCC----cccCH-----HHHHhhcCC--CccE---EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547 161 HFDLLPERG----WEVDL-----EAVEALADE--NTAA---IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226 (311)
Q Consensus 161 ~~~~~~~~~----~~~d~-----~~l~~~l~~--~~~~---i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay 226 (311)
+++.. .+. ..++. +.+++.+++ ..++ +++++|++ .|.+++ +++|+++|+++++.|++||||
T Consensus 132 yi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 132 YIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp EEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT
T ss_pred EecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccc
Confidence 99875 222 24455 888887753 4455 89999876 788888 999999999999999999999
Q ss_pred cC-CccCCCCCCcccccC---CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 227 GH-LAFGSTPYIPMGVFG---SIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 227 ~~-~~~~~~~~~~~~~~~---~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+. +.|...+...+..-. .+..++++.|.+|. ++++.-+.++--
T Consensus 207 Gah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~ 253 (417)
T PF01276_consen 207 GAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHV 253 (417)
T ss_dssp -TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEE
T ss_pred cccccCCCCccchhhccCccccccceeeeechhhc--ccccccceEEEe
Confidence 86 444421211111111 23357999999998 566666555443
No 269
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.63 E-value=9.5e-14 Score=128.84 Aligned_cols=204 Identities=16% Similarity=0.106 Sum_probs=147.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE--EeCChHHHHHHHHHHHhc------
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY--ITLGCMEAVEIILTVITR------ 132 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~--~t~g~~~a~~~~~~~l~~------ 132 (311)
.+..|.+.+.|...+..+.. ++...+...++.+.+.+++.+.+|.+-..+++. +|+|+|+++..++.+...
T Consensus 51 t~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888888764433 233334455788888888887777541113443 489999999988765531
Q ss_pred --CC----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547 133 --LG----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206 (311)
Q Consensus 133 --~g----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l 206 (311)
.| ...|+++.-.|.++...++..|+++..++++. +++.+|++.|++.+++++.+|+++..+|.||.+.| +
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i 205 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---V 205 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---H
Confidence 11 13799999999999999999999999998754 34679999999999999999999999999999999 9
Q ss_pred HHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 207 QKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 207 ~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
++|+++|+++ |+|+++|.+|+.+.. -++....+. ...-.-+..|.+|.. ..-..+|.+++.++
T Consensus 206 ~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~~-~~P~g~G~l~~r~~ 277 (431)
T TIGR01788 206 KALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKYG-LVYPGVGWVIWRDE 277 (431)
T ss_pred HHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhcc-CCCCCcEEEEEeCh
Confidence 9999999999 999999999996331 122222222 111224666999974 33455888887654
No 270
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.62 E-value=8.5e-14 Score=128.45 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=158.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++++++||..|--..+.+. .+|.+.+++.+++..... .+ .....+.+..+++++.+.. ..+.+++++++++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 5889999987622222233 369999999998864321 11 1234567788899887532 24689999999999
Q ss_pred HHHHHHHHhc------CCCCEEEecCCCCcchHH-HHHHcCcEEEEeeccC-CCCc----ccCHHHHHhhcCCCccEEEE
Q 021547 123 VEIILTVITR------LGAANILLPRPGWPFYES-FAKRNHIEVRHFDLLP-ERGW----EVDLEAVEALADENTAAIVI 190 (311)
Q Consensus 123 ~~~~~~~l~~------~g~d~Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~i~i 190 (311)
++.+++.... +|..+|+.....|++... .+...+.........+ ..++ ..|++.+++.+.+++.++++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9999988852 243678888887776533 3333332211000000 0111 24788999988877777777
Q ss_pred eCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 191 INPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 191 ~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
...++..|... +++.+++|.++|++||+++|+||++.++...|..+ ....++-.+++ .+++|.++. |+++|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~-a~~~~gv~PDi---~t~gK~lg~-G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF-AYELSGIEPDI---MTLGKGIGG-GVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh-hHhhcCCCCce---eeehhhhhC-CcceEEEE
Confidence 77677778765 68889999999999999999999999865455422 22223222233 478999864 79999998
Q ss_pred eeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+... +..........+++.+|++.+++.+.|+
T Consensus 261 ~~~~--------i~~~~~~~~~~T~~g~pl~~aaala~L~ 292 (395)
T PRK03715 261 AKAE--------VAVFEAGDQGGTYNGNPLMTAVGVAVIS 292 (395)
T ss_pred Eccc--------cccccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 7542 3221112223355677888777666553
No 271
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=1.6e-13 Score=128.55 Aligned_cols=251 Identities=20% Similarity=0.152 Sum_probs=155.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|--... .--.+|.+.+++.+++.... .+.......+.+..+++.+.+..+.. ..+.++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGse 128 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTS-VGNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAE 128 (443)
T ss_pred CCCCEEEEcCcchhhhc-cCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHH
Confidence 35888999987631111 12367899999999987432 22222223456666777776544311 1247889999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC-C---ccc--------CH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER-G---WEV--------DL 174 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~---~~~--------d~ 174 (311)
|++.+++.... .|+++|+...++|++....+... +. .+..++..... . ... ..
T Consensus 129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK06058 129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI 208 (443)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence 99998885432 34478999999998876443321 10 11222211100 0 000 12
Q ss_pred HHHHhhcCCCccEEEEeCCCC-CCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547 175 EAVEALADENTAAIVIINPCN-PCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG 252 (311)
Q Consensus 175 ~~l~~~l~~~~~~i~i~~p~n-ptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~ 252 (311)
+.+++.+..+..+.++..|-+ ..|.. .+++.+++|.++|++||+++|.||++.++...|..+ ....++-.++++
T Consensus 209 ~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv--- 284 (443)
T PRK06058 209 TVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI--- 284 (443)
T ss_pred HHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---
Confidence 334444433334445556644 44554 457789999999999999999999999876655432 223333333444
Q ss_pred cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .|+++|+++++. ++++.+... ...+++.++++++++.+.|+
T Consensus 285 ~~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 285 TTAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIE 333 (443)
T ss_pred EEccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5589987 799999999853 466666544 34577899999999998875
No 272
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=6.9e-14 Score=130.46 Aligned_cols=252 Identities=17% Similarity=0.070 Sum_probs=154.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-... .--.+|.+.+++.+++.......+. .-..+.+..+++.+.+..+. ..+.++++++|+
T Consensus 38 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGs 112 (423)
T PRK05964 38 LADGRELIDAISSWWVAT-HGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTPG--GLDHVFFSDSGS 112 (423)
T ss_pred eCCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcH
Confidence 346899999987722211 1235789999999998753211110 01123455566666654321 236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCCCcccCHHHHHhh
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
+|++.+++.... +|+.+|+.....|.+....+... +- ....++....+....+++.+++.
T Consensus 113 eA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 192 (423)
T PRK05964 113 VAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL 192 (423)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence 999998887642 34468998888887654332221 11 11222221111011126777777
Q ss_pred cC---CCccEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 181 AD---ENTAAIVIIN-PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 181 l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
+. ++..++++.. .++..|... +.+.+++|.++|++||+++|+||++.++...|..+ ....++..+++ .+++
T Consensus 193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pDi---~~~~ 268 (423)
T PRK05964 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPDI---MCLS 268 (423)
T ss_pred HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCCe---eeee
Confidence 64 2444555544 367778755 88999999999999999999999998775555321 22222222223 3788
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++..++++|++++.. ++++.+.. ..+.+++.++++.+++.+.|+
T Consensus 269 K~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 321 (423)
T PRK05964 269 KGLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD 321 (423)
T ss_pred hhhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 99876558999988743 46666642 122345678888887776664
No 273
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.59 E-value=4.7e-13 Score=124.70 Aligned_cols=205 Identities=19% Similarity=0.156 Sum_probs=155.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL------- 133 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~------- 133 (311)
..+++...+++...+..+.. .....++..++.+.+..++.+.++.+ ..-.-.+|+|+|+++.+.+.+....
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~ 149 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALA 149 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhh
Confidence 34567777777777765432 22233477899999999999988866 3345688999999998777666321
Q ss_pred -C-----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE--EEEeCCCCCCccCCCHHH
Q 021547 134 -G-----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA--IVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 134 -g-----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--i~i~~p~nptG~~~~~~~ 205 (311)
+ .-+|+++.-.|.++...+..+|++...+++.+. ++.+|++++++.+.+++.. |+-+.++.++|.+-+
T Consensus 150 ~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd--- 225 (460)
T COG0076 150 ESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD--- 225 (460)
T ss_pred cccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---
Confidence 1 126999999999999999999999999998765 7899999999999987776 888888999999988
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
+++|.++|+++++|++||.||+++.. ..... . ..+.-..-.=+..+++|. |..=..+||++..+++
T Consensus 226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~-~-~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e 293 (460)
T COG0076 226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG-R-WDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE 293 (460)
T ss_pred HHHHHHHHHHcCCcEEEEccccceeecccCccc-h-hhcCCCCceEEEECcccc-cCCCCCceEEEEECHH
Confidence 99999999999999999999998653 22111 1 011111222445599998 6777899999998864
No 274
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.58 E-value=4e-13 Score=125.78 Aligned_cols=252 Identities=17% Similarity=0.080 Sum_probs=152.8
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~ 119 (311)
..+++.++||..|.-... .--.+|.+.+++.+++......... .-..+.+..+++.+....+....... ++++++|
T Consensus 35 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG 111 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLA-LGHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG 111 (442)
T ss_pred eCCCCEEEEccccHhhhc-CCCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence 345889999987732211 1235789999999998753211110 11234556667777654331111124 5667899
Q ss_pred HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C------------cEEEEeeccCCCC--ccc----CH----H
Q 021547 120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H------------IEVRHFDLLPERG--WEV----DL----E 175 (311)
Q Consensus 120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~~----d~----~ 175 (311)
++|++.+++.... .|+.+|+.....|.+....+... + ..+..++...... +.. +. +
T Consensus 112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (442)
T TIGR00709 112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIE 191 (442)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 9999998887653 44468998888888765433322 2 0122222211000 000 11 1
Q ss_pred HHHhhcC------CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 176 AVEALAD------ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 176 ~l~~~l~------~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
.+++.+. .++.++++...++..| ..++++.++++.++|++||+++|.||++.++...|. +.....+...+++
T Consensus 192 ~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~PDi 270 (442)
T TIGR00709 192 YFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEPDF 270 (442)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCCcE
Confidence 2333331 3455666665554445 457999999999999999999999999999876664 3333344434444
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++ ++|.++. |+++|+++++.. ++.+.. ....+++.++++++++.+.|+
T Consensus 271 v~---~gK~l~~-G~Pigav~~~~~---------~~~~~~~~~~~T~~gnpla~aaa~a~L~ 319 (442)
T TIGR00709 271 VV---MSKAVGG-GLPLAVLLIAPE---------FDAWQPAGHTGTFRGNQLAMVTGTEALN 319 (442)
T ss_pred EE---EcccccC-CcccEEEEEchH---------HhccCCCcCCCCCCcCHHHHHHHHHHHH
Confidence 43 8999876 899999998542 122211 234567889999999988875
No 275
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.58 E-value=2.1e-13 Score=125.18 Aligned_cols=184 Identities=20% Similarity=0.143 Sum_probs=133.5
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEE
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVR 160 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~ 160 (311)
.|..++.+.+|++++++++ ..+.++.+++|+.|+.+++...+++| |.| +...|.. ....+...|...+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pG-d~V--p~n~~f~Tt~ahI~~~Ga~fv 141 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPG-QYV--PGNMYFTTTRYHQELNGGIFV 141 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCc-CEE--CCccchHhhHHHHHhCCcEEE
Confidence 5998889999999999999 34579999999999998877778899 865 4444443 3344677887554
Q ss_pred Eeecc--------CCCCcccCHHHHHhhcCCC----ccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 161 HFDLL--------PERGWEVDLEAVEALADEN----TAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 161 ~~~~~--------~~~~~~~d~~~l~~~l~~~----~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
.+... ...++.+|++.|++.++++ ++++.+..++|.. |+.+|.++++++.++|++||+.||+|.++.
T Consensus 142 Di~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra 221 (460)
T PRK13237 142 DIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC 221 (460)
T ss_pred eeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch
Confidence 44211 1245789999999988753 3456777777877 799999999999999999999999999997
Q ss_pred CC----c------cCCCCCC----cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 228 HL----A------FGSTPYI----PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 228 ~~----~------~~~~~~~----~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
.- . |.+.+.. .+..+. .+.+.|++|.++.+- -|+|++.++ ++.++++..
T Consensus 222 ~gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D~-------eL~~~~r~~ 284 (460)
T PRK13237 222 VENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMNDE-------ELFDEAKEL 284 (460)
T ss_pred hcChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECCH-------HHHHHHHHh
Confidence 32 1 2232211 111222 267778999977661 288887764 478888876
No 276
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.57 E-value=4.6e-13 Score=122.73 Aligned_cols=252 Identities=16% Similarity=0.112 Sum_probs=165.0
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+.+++.+|||..|--..- .--.+|.+.++++++++.....++... ..+-...+++.|.+..... ..+.++++++|+
T Consensus 52 DvdG~~ylDf~sgi~v~~-~GH~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGa 127 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLN-LGHNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPGS-GLKKVFFGNSGA 127 (447)
T ss_pred eCCCCEEEEcccCcchhc-cCCCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCcc-cCCeEEecCCcH
Confidence 345899999998632211 123789999999998875331122221 1144555666665533321 456799999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHH-HHHHcC-------------cEEEEeeccCC--CCccc--------CHH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYES-FAKRNH-------------IEVRHFDLLPE--RGWEV--------DLE 175 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~--~~~~~--------d~~ 175 (311)
+|++++++.-.. .|...||.....|.+... .....+ ..+..+|.... ..+.. ..+
T Consensus 128 eA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~ 207 (447)
T COG0160 128 EAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE 207 (447)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence 999999887753 333678888888765322 111111 12444443221 11111 233
Q ss_pred HHHhhcC------CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 176 AVEALAD------ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 176 ~l~~~l~------~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
.+++.+. .++.++++...+...|... |++.++++.++|++||+++|+||++.++..+| .+..+...+-.+++
T Consensus 208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDi 286 (447)
T COG0160 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDI 286 (447)
T ss_pred HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCE
Confidence 4444332 1455566666688888754 56669999999999999999999999998888 66777777666666
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
| +++|.++. |+++|.++... ++++..-.....++..|+++.+++.+.|+
T Consensus 287 v---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~ 335 (447)
T COG0160 287 V---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLD 335 (447)
T ss_pred E---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHH
Confidence 7 88999876 99999999853 35663333345568899999999888775
No 277
>PLN03032 serine decarboxylase; Provisional
Probab=99.57 E-value=1.1e-12 Score=119.33 Aligned_cols=194 Identities=16% Similarity=0.057 Sum_probs=137.5
Q ss_pred HHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEE
Q 021547 66 VAEDAIVDSVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCMEAVEIILTVITR--LGAANI 138 (311)
Q Consensus 66 ~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~V 138 (311)
...++|...+..+..+.+.. .....++.+.+.+++.+.+|. .++++ ++|+|+|+++..++.+... ++ ..|
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~--~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~v 114 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL--EKDEYWGYITTCGTEGNLHGILVGREVFPD-GIL 114 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC--CCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEE
Confidence 34666666654322112221 123466777777777766664 44555 9999999999888776542 45 689
Q ss_pred EecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 139 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
+++.-.|.+....++.+|.++..+|.+ .++.+|+++|++.+++ ++.+++++..+|++|.+.| +++|+++|++
T Consensus 115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d--~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~ 189 (374)
T PLN03032 115 YASRESHYSVFKAARMYRMEAVKVPTL--PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKE 189 (374)
T ss_pred EeCCCceeHHHHHHHHcCCCCeEeeeC--CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHH
Confidence 999999999999999999998888874 4568999999998876 4667777788999999988 8999999999
Q ss_pred hC-----CEEEEeccccCCc--cCC-CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 216 LG-----ILVIADEVYGHLA--FGS-TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 216 ~~-----~~li~D~ay~~~~--~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+| +|+++|.+|+... +.. .+...+. . .-.-...|.+|..+. -..+|.+++.+
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~---~-~vDSis~s~HK~~g~-P~g~G~ll~r~ 249 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR---K-PIGSVSVSGHKFLGC-PMPCGVALTRK 249 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCC---c-CCcEEEECcccccCC-CcCeEEEEEEc
Confidence 96 5999999998742 211 1111111 1 122456699998543 36688888865
No 278
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.56 E-value=5.9e-13 Score=124.15 Aligned_cols=251 Identities=18% Similarity=0.122 Sum_probs=148.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEE-eCCh
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYI-TLGC 119 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~-t~g~ 119 (311)
.+++.+|||..|--... .--.+|.+.+++.+++...... .......+.+..+++.+.+....+-..+ .+++ +++|
T Consensus 36 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~--~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 36 EDGKEYIDFFAGAGALN-YGHNNPVLKQALIDYLQRDGIT--HGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCCCEeeecccchhhcc-CCCCCHHHHHHHHHHHHhcccc--cccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 45889999987732211 1236789999999988742111 0101112345555555554221111112 4655 5899
Q ss_pred HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCCCc-ccCHHHHHhhcCC-
Q 021547 120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPERGW-EVDLEAVEALADE- 183 (311)
Q Consensus 120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~~- 183 (311)
++|++.+++.... .|+.+|+.....|.+....+... +. .+..+|....... .-+++.+++.+..
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 9999998887753 45468888888887654322211 10 1233332110000 0256777777642
Q ss_pred -----CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547 184 -----NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257 (311)
Q Consensus 184 -----~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 257 (311)
+..++++.......|. .++++.+++|.++|++||+++|+||++.++...|.. .....++-.++++ +++|.
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~-~~~~~~~v~PDi~---t~~K~ 268 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTF-FSFERAGITPDIV---TLSKS 268 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHH-HHHhhcCCCCCEE---Eeccc
Confidence 3445555555666776 568889999999999999999999999886555532 1222222233333 77899
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhh
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l 308 (311)
++..|+++|++++++. + ..+.. ....++..++++.+++.+.|
T Consensus 269 l~~~G~pigav~~~~~--------i-~~~~~~~~~~T~~gnp~~~aaa~a~l 311 (425)
T PRK09264 269 ISGYGLPMALVLIKPE--------L-DVWKPGEHNGTFRGNNLAFVTATAAL 311 (425)
T ss_pred cCCCccceEEEEEchh--------h-hccCCCccCCCCCCCHHHHHHHHHHH
Confidence 8776999999998642 2 22222 22335567777776664544
No 279
>PRK15029 arginine decarboxylase; Provisional
Probab=99.55 E-value=2.7e-13 Score=132.11 Aligned_cols=173 Identities=12% Similarity=0.005 Sum_probs=129.2
Q ss_pred CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547 82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160 (311)
Q Consensus 82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~ 160 (311)
+...+.|. .+..+..|+.++ .....++++|+|.++.+++.+++.+| |+||+++.+|.+..+.+...|+.++
T Consensus 199 ~L~~p~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~g-d~Vlv~RN~HKSv~~al~L~ga~Pv 270 (755)
T PRK15029 199 SLLDHTGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDN-DVVVVDRNCHKSIEQGLILTGAKPV 270 (755)
T ss_pred CCCCCCcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeEE
Confidence 34444454 566666777673 23568899999999999999999999 9999999999999999999999999
Q ss_pred EeeccCCCCc----ccC-----HHHHHhhcCC--Ccc--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 161 HFDLLPERGW----EVD-----LEAVEALADE--NTA--------AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 161 ~~~~~~~~~~----~~d-----~~~l~~~l~~--~~~--------~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
++.... ..+ .++ .+.+++.+.. ..+ ++++++|++ .|.+++ +++|+++|+++++.|+
T Consensus 271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLH 345 (755)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEE
Confidence 997543 222 334 7888887643 334 889999876 788888 9999999999999999
Q ss_pred EeccccC-CccCCCCCCccccc-----C-CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 222 ADEVYGH-LAFGSTPYIPMGVF-----G-SIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 222 ~D~ay~~-~~~~~~~~~~~~~~-----~-~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+||||+. +.|.. .+.....+ . ....++++.|.+|. +|++..|.++-
T Consensus 346 vDEAhGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LH 398 (755)
T PRK15029 346 FDEAWYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIH 398 (755)
T ss_pred EECccccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhhe
Confidence 9999986 44442 12111222 1 12235999999998 57777776553
No 280
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.54 E-value=7.5e-14 Score=118.37 Aligned_cols=212 Identities=18% Similarity=0.261 Sum_probs=145.4
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~ 123 (311)
...+||-..- -..+..+++++|.++...+.. |+.++...+|++.+|+.+.+ |. +|+++| |.+.
T Consensus 21 ~~~vDLRSDT-----vT~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~GK--------EAgLFv~SG-TmgN 84 (384)
T KOG1368|consen 21 HRSVDLRSDT-----VTVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFGK--------EAGLFVPSG-TMGN 84 (384)
T ss_pred eecccccccc-----ccCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhCc--------cceeeeccc-cccc
Confidence 3444555443 234568899999888766654 66556778999999999954 33 455555 4455
Q ss_pred HHHHHHHh-cCCCCEEEecCCCCcc-hH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--------CccEEEEe
Q 021547 124 EIILTVIT-RLGAANILLPRPGWPF-YE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--------NTAAIVII 191 (311)
Q Consensus 124 ~~~~~~l~-~~g~d~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~i~i~ 191 (311)
.++++.-| ++| .+||+.+.+|.- |. ......|..+.++ .++++..++++++++.+.. -+++|++.
T Consensus 85 llaIm~Hc~~rg-~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclE 161 (384)
T KOG1368|consen 85 LLAIMVHCHQRG-SEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLE 161 (384)
T ss_pred HHHHHHHhcCCC-ceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEee
Confidence 55555554 588 999999887753 22 2445556666655 5667788999999998862 47899999
Q ss_pred CCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 192 NPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 192 ~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
|.+|-+| .++|.|++.++.+||+++|+.++.|.+--+-.- -|.+ +..+-..-+.|.| .|||.+|+| +|.+
T Consensus 162 NT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~---vk~i~~~fDSVsi-CLSKglgAP---VGSV 234 (384)
T KOG1368|consen 162 NTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVP---VKKICSAFDSVSI-CLSKGLGAP---VGSV 234 (384)
T ss_pred ccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCC---HHHHHHhhhhhhh-hhhccCCCC---cccE
Confidence 9876666 999999999999999999999999998653110 1222 1111111111333 799997665 7999
Q ss_pred EeeCCCCccchhhHHHHHhhh
Q 021547 269 ATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++.+.+ ++++.+.+
T Consensus 235 iVG~k~-------FI~kA~~~ 248 (384)
T KOG1368|consen 235 IVGSKD-------FIDKARHF 248 (384)
T ss_pred EEccHH-------HHHHHHHH
Confidence 987754 77777666
No 281
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.54 E-value=1.5e-12 Score=120.96 Aligned_cols=252 Identities=16% Similarity=0.083 Sum_probs=148.0
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCC-CCCCEEE-eCC
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKL-SADDIYI-TLG 118 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~-~~~~v~~-t~g 118 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++..... +.......+.+..+++.+.+....+. ..+.+++ +++
T Consensus 31 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 107 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALN-YGHNNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT 107 (412)
T ss_pred eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence 345889999987732211 123679999999998864211 11111123445556666654311010 1124655 589
Q ss_pred hHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCc-ccCHHHHHhhcC-
Q 021547 119 CMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGW-EVDLEAVEALAD- 182 (311)
Q Consensus 119 ~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~- 182 (311)
|++|++.+++.... .|+.+|+.....|.+....+.. .+. .+..+|....... .-+++.+++.+.
T Consensus 108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~ 187 (412)
T TIGR02407 108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED 187 (412)
T ss_pred chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence 99999998887753 4447899888888876433222 221 1222222110000 013566777664
Q ss_pred -----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547 183 -----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256 (311)
Q Consensus 183 -----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 256 (311)
+++.++++....++.|. ..+++.+++|.++|++||+++|+||++.++...|.-+ ......-.++++ +++|
T Consensus 188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~~~~~v~PDi~---~~~K 263 (412)
T TIGR02407 188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF-SFEPAGIEPDIV---CLSK 263 (412)
T ss_pred ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH-HhcccCCCCCEE---Eech
Confidence 23455665555788888 5788899999999999999999999998765444321 222222223333 6789
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHh-hhhccccCCCchhHHHHHhhh
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIK-ACLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~q~~~~~~l 308 (311)
.++..|+|+|+++++.. + ..+. .....++..++++.+++.+.|
T Consensus 264 ~lg~~G~pigav~~~~~--------~-~~~~~~~~~~T~~gnpl~~aaa~a~l 307 (412)
T TIGR02407 264 SISGYGLPLALTLIKPE--------L-DVWKPGEHNGTFRGNNLAFVTATAAL 307 (412)
T ss_pred hccCCccceeEEEEchh--------h-hccCCCccCCCCCccHHHHHHHHHHH
Confidence 97544999999998642 2 2222 123345667888665544433
No 282
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=1.8e-12 Score=121.31 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=151.5
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-....+ -.+|.+.+++.+++..... +.......+....+++.+.+..+.. ..+.|+++++|+
T Consensus 38 D~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGs 113 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGS 113 (445)
T ss_pred eCCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchH
Confidence 34588899997662211112 2579999999999874321 1111112234445555555433211 125899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcCc-------------EEEEeeccCCCC--cc-cC-------HH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNHI-------------EVRHFDLLPERG--WE-VD-------LE 175 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~ 175 (311)
+|++.+++.... .|+.+|+.....|.+....+. ..+. .+..++...... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 999998886542 343678888888876543222 2221 122233211100 00 01 13
Q ss_pred HHHhhcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 176 AVEALAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 176 ~l~~~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
.+++.+. +++.++++.......|.. .+++.+++|.++|++||+++|.||++.++...|.. .....+.-.++++
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~-~a~~~~gv~pDi~ 272 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKW-SSISHFNITPDLM 272 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchH-HHHHhcCCCCCEe
Confidence 3444332 345566666667777876 68888999999999999999999999877555432 1222233233333
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .|+++|+++++. ++++.+... ...+.+.++++++++.+.|+
T Consensus 273 ---t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 321 (445)
T PRK08593 273 ---SFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATID 321 (445)
T ss_pred ---eeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence 8899976 689999999853 366666422 23466788888887777664
No 283
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=9e-13 Score=118.55 Aligned_cols=191 Identities=20% Similarity=0.246 Sum_probs=144.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
.+.++.++++|.+.+- .+.++ ....+.+.+.+.++..++.. +.+-+++++++|.++++++..+++|| |+||+
T Consensus 14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pg-dkVLv 85 (383)
T COG0075 14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPG-DKVLV 85 (383)
T ss_pred CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCC-CeEEE
Confidence 5678888888775542 23333 44555566666666555532 33556778889999999999999999 99999
Q ss_pred cCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 141 PRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 141 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
...+..+ +.++++..|.+++.+... .+-.++++++++.+++ +.+++++++.-.+||+..| +++|+++|++|
T Consensus 86 ~~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~ 160 (383)
T COG0075 86 VVNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEH 160 (383)
T ss_pred EeCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHc
Confidence 8888775 468999999999998754 4556899999999984 5778999999999999998 99999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|.++|+|.+-+. ++. ...+..+. -.+.+.+.-|.+++| -.+|.+.+++
T Consensus 161 g~l~iVDaVsS~---Gg~-~~~vd~wg---iDv~itgSQK~l~~P-PGla~v~~S~ 208 (383)
T COG0075 161 GALLIVDAVSSL---GGE-PLKVDEWG---IDVAITGSQKALGAP-PGLAFVAVSE 208 (383)
T ss_pred CCEEEEEecccC---CCc-ccchhhcC---ccEEEecCchhccCC-CccceeEECH
Confidence 999999999884 232 23333333 339999999998875 2356666654
No 284
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.51 E-value=1.3e-12 Score=118.87 Aligned_cols=241 Identities=17% Similarity=0.118 Sum_probs=153.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|--... .--.+|.+.+++.++++.... +... -..+.+..+++.+.+.. ..+.+++++++++
T Consensus 21 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~SGse 92 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNV-LGHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWV----NYEYVYMGNSGTE 92 (364)
T ss_pred CCCCEEEEcccChhhcc-CCCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhc----CCCEEEEeCchHH
Confidence 36889999977621111 123568888999999874321 1111 11223344444444322 2358999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc--------CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN--------HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
|++++++.... .|+++|+....+|.+....+... +......++.. -. ..|.+.+++.+.+++.++++..
T Consensus 93 A~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~-~~d~~~l~~~i~~~~aAvivEp 170 (364)
T PRK04013 93 AVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IP-FNDVEAAKEAITKETAAVIFEP 170 (364)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ec-CCCHHHHHHHhcCCcEEEEEcC
Confidence 99999988753 44478999988888754332221 11100000000 00 1267888888887888888777
Q ss_pred CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
.+...|... +++.++++.++|++||+++|.||++.++ ..|. ......++-.++++ +++|.++. |+++|.++..
T Consensus 171 i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~-~~a~~~~gv~PDiv---~~gK~lgg-G~P~~a~~~~ 244 (364)
T PRK04013 171 IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYKVEPDIV---TMGKGIGN-GVPVSLTLTN 244 (364)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc-hhHHHhcCCCCCEE---EecccccC-CceeEEEEec
Confidence 666666644 6677999999999999999999999987 5553 33333344444555 66999765 8999999875
Q ss_pred CCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.. + . ......+++.+|++.+++.+.|+
T Consensus 245 ~~--------~-~--~~~~~~T~~gnp~~~aaa~a~l~ 271 (364)
T PRK04013 245 FD--------V-E--RGKHGSTFGGNPLACKAVAVTLR 271 (364)
T ss_pred cc--------c-c--CCCcCCCCCcCHHHHHHHHHHHH
Confidence 32 2 1 11234567889999888887764
No 285
>PRK06541 hypothetical protein; Provisional
Probab=99.50 E-value=5.6e-12 Score=118.41 Aligned_cols=251 Identities=16% Similarity=0.127 Sum_probs=150.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++..... +.......+.+..+++.+.+..+ ...+.++++++|+
T Consensus 48 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs 122 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQ-VGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGS 122 (460)
T ss_pred eCCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcH
Confidence 346889999987721111 123578999999999874321 11111112334445555554322 1236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC---cccC----
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG---WEVD---- 173 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~---~~~d---- 173 (311)
+|++.+++.... +|+.+|+....+|.+....+.. .+. .+..++...... +.-+
T Consensus 123 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 123 EAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence 999988886542 2347888888888765432221 111 122222111000 1112
Q ss_pred ----HHHHHhhcC---CCccEEEEeCC-CCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 174 ----LEAVEALAD---ENTAAIVIINP-CNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 174 ----~~~l~~~l~---~~~~~i~i~~p-~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
++.+++.+. .+..+.++..| +++.|.+.+ ++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv 281 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGY 281 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCC
Confidence 256676664 24455566666 888998765 8889999999999999999999997664334322 2222332
Q ss_pred CCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++ +++|.++ .|+ ++|++++++ ++++.+... ...++..++++.+++.+.|+
T Consensus 282 ~PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~ 340 (460)
T PRK06541 282 VPDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLD 340 (460)
T ss_pred CCCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 33334 5899976 686 999999854 356655421 22356677888777766553
No 286
>PLN02590 probable tyrosine decarboxylase
Probab=99.50 E-value=5.7e-12 Score=119.44 Aligned_cols=214 Identities=13% Similarity=0.063 Sum_probs=145.4
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEeCChHHHHHH
Q 021547 54 DPAAFPCFRTAAVAEDAIVDSVRS---SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-----ADDIYITLGCMEAVEI 125 (311)
Q Consensus 54 ~p~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~v~~t~g~~~a~~~ 125 (311)
+|.++..++.++.....+.+.+.. .....|...+...++++.+.+|+.+.+|.+-. ...-++++|+|+++..
T Consensus 130 hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~ 209 (539)
T PLN02590 130 SPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLV 209 (539)
T ss_pred CCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHH
Confidence 444444444444444555554432 22335767778899999999999998887642 1345778888888776
Q ss_pred HHHHHhc-----------CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC------c
Q 021547 126 ILTVITR-----------LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN------T 185 (311)
Q Consensus 126 ~~~~l~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~ 185 (311)
++.+... +. -.|++.+..|..+..++..+|+ +++.++.+..+++.+|.+.|++.+.+. +
T Consensus 210 al~aAR~~~~~~~g~~~~~~-~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P 288 (539)
T PLN02590 210 VVLAARDRILKKVGKTLLPQ-LVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP 288 (539)
T ss_pred HHHHHHHHHHhhhcccCCCC-EEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 6555422 11 2566788899999999999998 477787755456899999999988542 2
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcce
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
-+|+.+..+..||.+-| +++|.++|++||+|++||.+|+++..--..... +..+. .-+ =+..+++|+ +.....
T Consensus 289 ~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie-~AD-Sit~D~HK~-l~~p~~ 362 (539)
T PLN02590 289 FFICATVGTTSSAAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIE-NAD-SFNMNAHKW-LFANQT 362 (539)
T ss_pred EEEEEEeCCCCCcccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCc-cCC-EEEECchhh-cCcCcC
Confidence 33444455789999988 999999999999999999999985421111111 11111 111 344599998 556688
Q ss_pred eeEEEeeCCC
Q 021547 265 FGWLATNDPN 274 (311)
Q Consensus 265 ~G~i~~~~~~ 274 (311)
+|.+++.++.
T Consensus 363 cg~llvr~~~ 372 (539)
T PLN02590 363 CSPLWVKDRY 372 (539)
T ss_pred EEEEEecCHH
Confidence 9999987753
No 287
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=9.6e-12 Score=116.39 Aligned_cols=251 Identities=17% Similarity=0.127 Sum_probs=150.0
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-... .--.+|.+.+++.+++..... +....-..+....+++.+....+.+ ..+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsE 126 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTN-VGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTE 126 (441)
T ss_pred CCCCEEEECCCchhhcc-cCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHH
Confidence 35888999987732211 123578899999999874321 1111111244556666666543211 1368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCC--cc---------cCHH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERG--WE---------VDLE 175 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~---------~d~~ 175 (311)
|++.+++.... .|+.+|+.....|.+....+... +. .+..++...... +. -..+
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 99988876642 45478888888887754333221 11 122222210000 00 0123
Q ss_pred HHHh-hcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 176 AVEA-LAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 176 ~l~~-~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
.+++ .++ .++.++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....+.-.+++
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi 285 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI 285 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence 3555 221 234445554446666774 467779999999999999999999999875555322 22233323334
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ +++|.++ .|+++|+++++. +++.........+++.++++++++.+.|+
T Consensus 286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~ 334 (441)
T PRK05769 286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLE 334 (441)
T ss_pred E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 4 5899987 689999998854 24433322334456678999888887764
No 288
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.49 E-value=2.3e-12 Score=128.96 Aligned_cols=177 Identities=14% Similarity=0.138 Sum_probs=134.1
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH----HHHHHHHHHHhcC-CCC----EEEecCCCCcc
Q 021547 80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM----EAVEIILTVITRL-GAA----NILLPRPGWPF 147 (311)
Q Consensus 80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~----~a~~~~~~~l~~~-g~d----~Vl~~~p~~~~ 147 (311)
.+.|.| .+|+.++...+.+++.+..| .+.|.++++++ .++.++++++.++ | | .|+++...|..
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~G-d~~r~~vli~~~aH~s 628 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRG-DHHRNVCIIPVSAHGT 628 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccC-CCCCCEEEeCCCcCcc
Confidence 445554 34555444444444444433 38899999988 8899999999866 7 7 89999999998
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
....+...|++++.++.+ .++.+|+++|++.+++ ++++|++++|+|-+|...+ +++|+++|+++|..+++|.
T Consensus 629 n~a~a~~~G~~vv~v~~d--~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDg 703 (993)
T PLN02414 629 NPASAAMCGMKIVVVGTD--AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDG 703 (993)
T ss_pred CHHHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEe
Confidence 888888899999999874 4557999999999984 7789999999999999877 9999999999999999999
Q ss_pred cccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547 225 VYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND 272 (311)
Q Consensus 225 ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~ 272 (311)
++..-.. .......++ -.|+++|.+|+|+.| |-.+|.+.+..
T Consensus 704 Aq~~a~~---~l~~p~~~G---aD~~~~s~HK~f~~P~G~GGPg~G~l~~~~ 749 (993)
T PLN02414 704 ANMNAQV---GLTSPGFIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 749 (993)
T ss_pred cCHHhcc---CcCCccccC---CCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence 9964211 111122222 238999999987743 56688887643
No 289
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.48 E-value=9.3e-12 Score=117.07 Aligned_cols=216 Identities=12% Similarity=0.019 Sum_probs=138.3
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCcHH----HHH
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-MFGLPL----ARR 94 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~----lr~ 94 (311)
..++.+++..-.+ .....|+|--.. -..+|.+++++...+.... ...|.. ...... .|+
T Consensus 19 d~~~~~~~~~~~~-----~~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~ 87 (452)
T PTZ00094 19 DPELYELIEKEKE-----RQIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQK 87 (452)
T ss_pred CHHHHHHHHHHHH-----HHHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHH
Confidence 5667777664222 246778887775 2457889999888775321 111211 111222 344
Q ss_pred HHHHHHhhcCCCCCCCCCEEEe---CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH--------cC--cEEEE
Q 021547 95 AVAEYLNRDLPYKLSADDIYIT---LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR--------NH--IEVRH 161 (311)
Q Consensus 95 ~ia~~l~~~~g~~~~~~~v~~t---~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~--------~g--~~~~~ 161 (311)
.++++++ ..++++.++ +|+++++.+++.++.++| |+|++....|......... .+ +++..
T Consensus 88 ~~a~lf~------a~~~~~~~~~~~~sgt~an~~v~~al~~~g-d~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~ 160 (452)
T PTZ00094 88 RALEAFG------LDPEEWGVNVQPYSGSPANFAVYTALLQPH-DRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLP 160 (452)
T ss_pred HHHHHhC------CCcccceeecCCCchHHHHHHHHHHhcCCC-CEEEecccccCCcccccccccccccccceeeeeeee
Confidence 5555663 355667666 788999999999999999 9999988777665432211 11 23334
Q ss_pred eeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcc
Q 021547 162 FDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPM 239 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~ 239 (311)
++++ .++.+|+++|++.+++ +++++++. ++.+|...| +++|.++|+++|+++++|++|+.-..... ...++
T Consensus 161 ~~~~--~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~ 233 (452)
T PTZ00094 161 YQVN--EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF 233 (452)
T ss_pred cccC--CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC
Confidence 4333 3467999999998854 56666553 345899988 88888999999999999999986333211 11121
Q ss_pred cccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
. +..+++.|.+|+++.|. -|++.+..
T Consensus 234 ~-----~~D~l~~S~hK~l~GP~--Gg~l~~~~ 259 (452)
T PTZ00094 234 P-----YADVVTTTTHKSLRGPR--SGLIFYRK 259 (452)
T ss_pred C-----CCcEEEcCCccCCCCCC--ceEEEEec
Confidence 1 23388999999864443 37777743
No 290
>PLN02880 tyrosine decarboxylase
Probab=99.48 E-value=1.5e-12 Score=122.88 Aligned_cols=186 Identities=12% Similarity=0.040 Sum_probs=133.5
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCC-----CCEEEeCChHHHHHHHHHHHhc-----C-----CCCEEEecCCCCc
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSA-----DDIYITLGCMEAVEIILTVITR-----L-----GAANILLPRPGWP 146 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~-----~-----g~d~Vl~~~p~~~ 146 (311)
.|...+...++++.+.+|+.+.+|.+-.. ..-++|+|+|+++..++.+-.. . ..-.|++++..|.
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 46556678999999999999988865321 2467788989887666555432 1 1025667888999
Q ss_pred chHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC-----CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 147 FYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE-----NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 147 ~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
....++..+|+. ++.+|.+..+++.+|.+.|++.+.+ ....+ +.+..+..+|.+.| +++|+++|++||
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 999999999995 6778775555778999999998753 22344 44445789999999 999999999999
Q ss_pred CEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 218 ILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 218 ~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+|++||.+|++...-...+. .+..+ ..-.-+..+++|++ +....+|.+++.+.
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gi--e~aDSit~d~HKwl-~~P~~~g~llvr~~ 323 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGV--EEADSFNMNAHKWF-LTNFDCSLLWVKDR 323 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCc--hhcCEEEECchhhc-CCCccEEEEEEeCH
Confidence 99999999998543111110 11111 11126677999984 66788999998753
No 291
>PLN02263 serine decarboxylase
Probab=99.47 E-value=2.5e-11 Score=112.50 Aligned_cols=175 Identities=18% Similarity=0.030 Sum_probs=131.7
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 165 (311)
+..++++.+.+|+.+.+|.+-+.-.-.+|+|||+++..++.+-.+ +. ..++++...|.++..+++.+|++++.+|.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence 568899999999999888653222358899999999887777654 23 478899999999999999999999999874
Q ss_pred CCCCcccCHHHHHhhcCCCc---cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC-----EEEEeccccCCcc---CCC
Q 021547 166 PERGWEVDLEAVEALADENT---AAIVIINPCNPCGNVLTYQHLQKIAETARKLGI-----LVIADEVYGHLAF---GST 234 (311)
Q Consensus 166 ~~~~~~~d~~~l~~~l~~~~---~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~-----~li~D~ay~~~~~---~~~ 234 (311)
.++.+|.+.|++.+.++. .+|+.+.++.++|.+-| +++|.++|+++|+ |+++|.+|+++.. ...
T Consensus 209 --~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 209 --VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred --CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 567899999999886543 34445566889999988 9999999999996 9999999988543 111
Q ss_pred CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+... +...-.-| ..+.+|. +..-..+|.+++.++
T Consensus 284 ~~~d---f~~~vDSI-svD~HK~-l~~P~~cgvll~R~~ 317 (470)
T PLN02263 284 PKVT---FKKPIGSV-SVSGHKF-VGCPMPCGVQITRME 317 (470)
T ss_pred cccC---CCcCccEE-EECCccc-cCCCcCEEEEEEehh
Confidence 1111 11111123 4499998 556688999998753
No 292
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.45 E-value=1.9e-11 Score=113.59 Aligned_cols=223 Identities=14% Similarity=0.047 Sum_probs=145.2
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHH
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS------MFNCYAPMFGLPLARRAVAE 98 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~ 98 (311)
..+|.++++.-.++ ....|+|--.. -..++.+++++...+.+- ....|.....+.+++....+
T Consensus 34 d~~~~~~~~~e~~r-----q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ 102 (493)
T PRK13580 34 EPRIAEAIRQELAD-----QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAE 102 (493)
T ss_pred CHHHHHHHHHHHHH-----HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHH
Confidence 45666666543222 45667776554 235688888887666421 11234455566777777777
Q ss_pred HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------------------------------CCCEEEecCCCCcc
Q 021547 99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-------------------------------GAANILLPRPGWPF 147 (311)
Q Consensus 99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-------------------------------g~d~Vl~~~p~~~~ 147 (311)
..++.||.. .-+|-.-+| +.|+.+++.++++| | |+|+..++...+
T Consensus 103 ra~~lf~a~--~anvqp~Sg-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~g-d~i~~l~l~~GG 178 (493)
T PRK13580 103 HAKELFGAE--HAYVQPHSG-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGN-QRLLGMSLDSGG 178 (493)
T ss_pred HHHHHhCCC--cccccCCCc-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCC-CEEEeecCCCCC
Confidence 777766533 345666565 66888899999876 7 999987655543
Q ss_pred hHH---HHHHcC--cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 148 YES---FAKRNH--IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 148 ~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
... .....+ .+...+++++ .++.+|.+.+++.++++++.++++..+|-.+ ..| +++|.++|+++|.++++
T Consensus 179 Hlthg~~~n~~~~~~~~~~y~vd~-~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~V 253 (493)
T PRK13580 179 HLTHGFRPNISGKMFHQRSYGVDP-DTGLLDYDEIAALAREFKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMV 253 (493)
T ss_pred eeecCcccchhhheeeeEecccCc-ccCccCHHHHHHHHhhcCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEE
Confidence 211 111222 5566666643 3457999999999999999999998876644 667 99999999999999999
Q ss_pred eccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 223 DEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 223 D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|++|..-.+.+.-... .... ....|+++|++|++. |-+.|+|+++
T Consensus 254 D~AH~~Gligg~~~~~~~~~~--~~~D~vtgT~hKaL~--GP~GG~I~~~ 299 (493)
T PRK13580 254 DMAHFAGLVAGKVFTGDEDPV--PHADIVTTTTHKTLR--GPRGGLVLAK 299 (493)
T ss_pred ECchhhceeccccchhhcCCC--CCCcEEEeCChhhcc--CCCeEEEEec
Confidence 9999975544222110 0001 122389999999863 3334888775
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.45 E-value=1.4e-11 Score=114.80 Aligned_cols=248 Identities=15% Similarity=0.069 Sum_probs=150.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.++||..|.-.. ..--.+|.+.+++.+++..... ..|.. .+.+..+++.+.+..+. ..+.++++++|+
T Consensus 72 ~dG~~ylD~~~g~~~~-~lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p~--~~~~v~f~~SGs 144 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIF-NVGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTPG--KLKYSFFCNSGT 144 (442)
T ss_pred CCCCEEEECCccHHhh-hcCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCCC--CcCEEEEeCCch
Confidence 3588899997771110 1123678999999999874321 12222 33445566666543321 225799999999
Q ss_pred HHHHHHHHHHhc----CCCCEEEecCCCCcchHHHHHHc-CcEEE---EeeccCCCC--cccCHHHHHhhcC------CC
Q 021547 121 EAVEIILTVITR----LGAANILLPRPGWPFYESFAKRN-HIEVR---HFDLLPERG--WEVDLEAVEALAD------EN 184 (311)
Q Consensus 121 ~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~~~l~~~l~------~~ 184 (311)
+|++++++.... .|+.+|+.....|.+....+... +.... ..+..+.-. ...|.+.+++.+. .+
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999998887643 25468998888887754333322 21100 011100000 0125566665553 23
Q ss_pred ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-
Q 021547 185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG- 262 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G- 262 (311)
..++++.......|... +++.++++.++|++||+++|+||++.++...|. ......++-.++++ +++|.++ .|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---t~gK~lg-~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK-MFACEHEGVQPDIL---CLAKALG-GGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc-chhhhhcCCCCCee---eehhhhc-CCc
Confidence 44555555566667755 677799999999999999999999987654453 22333333333444 5899975 57
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhh--h-hccccCCCchhHHHHHhhhh
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKA--C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.+++.+ ++.+.+.. + .+.+++.+|++.+++.+.|+
T Consensus 300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~ 341 (442)
T TIGR03372 300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATIN 341 (442)
T ss_pred ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHH
Confidence 6899998753 36666532 1 33456778888888777664
No 294
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.44 E-value=2e-11 Score=114.80 Aligned_cols=245 Identities=16% Similarity=0.102 Sum_probs=150.9
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|.-... .--.+|.+.+++.+++..... +.. ..+.+..+++.+.+..+ ..+.+++++++++
T Consensus 96 ~dG~~yiD~~~g~g~~~-lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE 166 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAI-IGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTE 166 (474)
T ss_pred CCCCEEEEecccccccc-cCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence 34788889876632211 123578999999999875432 222 12455566777765443 2478999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHH-HHc--CcEEE------EeeccCCCC----cccCHHHHHhhcCC---C
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFA-KRN--HIEVR------HFDLLPERG----WEVDLEAVEALADE---N 184 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~-~~~--g~~~~------~~~~~~~~~----~~~d~~~l~~~l~~---~ 184 (311)
|++.+++.... .|+.+|+....+|.+..... ... +.... .++.....+ ..-|++.+++.+.. +
T Consensus 167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~ 246 (474)
T PLN02482 167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGE 246 (474)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCc
Confidence 99998887753 45478888888888754211 110 00000 000000000 00167888887752 3
Q ss_pred ccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 185 TAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
..++++.......|.+.+ ++.+++|.++|++||+++|+||++.++ ..+. ......++-.+++ .+++|.++ .|+
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~-~ga~~~~gv~PDi---~t~gK~lg-gG~ 320 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY-GGAQEYFGITPDL---TTLGKVIG-GGL 320 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc-chHhHHhCCCCCE---EEecchhh-CCC
Confidence 444454444666776554 677999999999999999999999876 3332 2222223323333 38899976 689
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++|.+++.. ++++.+.. . ...+++.++++.+++.+.|+
T Consensus 321 Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~ 362 (474)
T PLN02482 321 PVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (474)
T ss_pred ceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHH
Confidence 999997742 46776642 1 23355678888777766553
No 295
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.44 E-value=5.6e-12 Score=105.85 Aligned_cols=204 Identities=16% Similarity=0.155 Sum_probs=154.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---------MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY 114 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---------~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~ 114 (311)
.++.||.+-=.- +--.+++.++++.+.-+.- .+.... .+-+..+.+.+++|+ ..|.+-
T Consensus 14 ~r~~iNv~PiQr----GGiLt~eArkal~E~gDGYSvCD~C~~Grldei~-kPpI~~F~~dlaeFl--------g~D~~R 80 (382)
T COG1103 14 TRGFINVNPIQR----GGILTEEARKALLEWGDGYSVCDFCLEGRLDEIT-KPPIKDFLEDLAEFL--------GMDEVR 80 (382)
T ss_pred hcCccccChhhc----cCcCCHHHHHHHHHhcCCcchhhhhccCcccccc-CCcHHHHHHHHHHHh--------CCceee
Confidence 456677663211 1234678888887765421 111111 123556777788888 567899
Q ss_pred EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----C---CccE
Q 021547 115 ITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----E---NTAA 187 (311)
Q Consensus 115 ~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~---~~~~ 187 (311)
+|+|+.++-++++.+++++| |.|++...+|.....++++.|+++..+|-.....+.+++|...+.+. + .+.+
T Consensus 81 ~t~GARe~KfavMhal~~~g-d~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~l 159 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEG-DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPAL 159 (382)
T ss_pred ecccchhhHHHHHHHhccCC-CEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceE
Confidence 99999999999999999999 99999999998888999999999999996666778899887766553 2 3666
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
.+++++....|...+ -++++++|+++++.++...+|.. |.-+.+...... .++++|-+|++ ++.-+||.
T Consensus 160 allTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~---DFiVgSGHKsm-AAs~PiGv 228 (382)
T COG1103 160 ALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGA---DFIVGSGHKSM-AASAPIGV 228 (382)
T ss_pred EEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee----ccccccccccCC---CEEEecCccch-hccCCeeE
Confidence 788899888888766 99999999999999999999986 333344443333 39999999997 45568999
Q ss_pred EEeeC
Q 021547 268 LATND 272 (311)
Q Consensus 268 i~~~~ 272 (311)
+....
T Consensus 229 l~~~e 233 (382)
T COG1103 229 LAMSE 233 (382)
T ss_pred Eeehh
Confidence 87754
No 296
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.44 E-value=1.8e-11 Score=111.97 Aligned_cols=187 Identities=22% Similarity=0.149 Sum_probs=127.1
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEeCChHHHHHHHHHHHhc--------CC-----CCEEEec
Q 021547 80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLS-----ADDIYITLGCMEAVEIILTVITR--------LG-----AANILLP 141 (311)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~v~~t~g~~~a~~~~~~~l~~--------~g-----~d~Vl~~ 141 (311)
...|...+...++++.+.+|+.+.+|++.. ...-++|+|+|+++..++.+..+ .| .-.|+++
T Consensus 68 ~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s 147 (373)
T PF00282_consen 68 GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVS 147 (373)
T ss_dssp TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccc
Confidence 335666667889999999999999988722 23568899999998877655421 12 1257777
Q ss_pred CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---C--cc-EEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---N--TA-AIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 142 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~--~~-~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
.-.|......+..+|+.++.++.++ ++.+|.++|++.+.+ + +. +|+.+..+..+|.+-+ +++|.++|++
T Consensus 148 ~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~ 222 (373)
T PF00282_consen 148 EQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEK 222 (373)
T ss_dssp TTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHH
T ss_pred cccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccc
Confidence 8799999999999999999998764 678999999987653 2 34 3444556789999977 9999999999
Q ss_pred hCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 216 LGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 216 ~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
+|+|+++|.+|++..+--..... +..+ +.-.-|. .+++|.++ .-..+|++++.++.
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi-~~adSit-~d~HK~l~-~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGI-ERADSIT-IDPHKWLG-VPYGCGVLLVRDKS 279 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTG-GGESEEE-EETTTTTS--SSS-EEEEESSGG
T ss_pred cceeeeeccccccccccccccccccccc-ccccccc-cchhhhhc-CCccceeEEeeccc
Confidence 99999999999983221111111 1111 1111233 39999965 45789999997754
No 297
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.43 E-value=2.6e-11 Score=114.92 Aligned_cols=252 Identities=15% Similarity=0.064 Sum_probs=150.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.+|||..|--....+ -.+|.+.+++.+++..... +... .+..+....+++.+.+.+. +...+.++++++|+
T Consensus 86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGs 161 (504)
T PLN02760 86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGS 161 (504)
T ss_pred CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChH
Confidence 3589999998863111222 4679999999999874321 1110 1223445556666554322 11235799999999
Q ss_pred HHHHHHHHHHh-------cCCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCC----c------
Q 021547 121 EAVEIILTVIT-------RLGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERG----W------ 170 (311)
Q Consensus 121 ~a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~----~------ 170 (311)
+|++.+++... .+++.+|+.....|.+... .+...|.. +..++...... .
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 241 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEF 241 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHH
Confidence 99999998774 1343678888877776532 22222221 11111100000 0
Q ss_pred -ccCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 171 -EVDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 171 -~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
....+++++.+. ++..++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus 242 ~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~-a~e~~gv 320 (504)
T PLN02760 242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYNI 320 (504)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh-HHHhcCC
Confidence 001234666552 234445554445666765 467779999999999999999999997775445422 2233333
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++ |.+++|.++...+++|.++++. ++++.+.. ....+++.+|++.+++.+.|+
T Consensus 321 ~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le 382 (504)
T PLN02760 321 KPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK 382 (504)
T ss_pred CCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence 333 3488999754225899988753 36666643 134467788998888887764
No 298
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.42 E-value=2.6e-13 Score=118.10 Aligned_cols=191 Identities=16% Similarity=0.147 Sum_probs=119.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC--C---CCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL--G---AANILLPRPGWPFYESFAKRNHIEVRHFD 163 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~--g---~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 163 (311)
.++|.+.|.++....-+..++...|++++|+|+.+++++.+|... . .-+|+...|.|+.|......+.-....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 478888888888776676777789999999999999999999643 1 14899999999999877655443333332
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
- |...+...-+..+-.-++++||||.|.+ .+.++ +..+..+|.|-+|.+-.|+. +....
T Consensus 125 G--------da~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp-----I~~~a 183 (363)
T PF04864_consen 125 G--------DASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP-----ITAPA 183 (363)
T ss_dssp E--------ECCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B
T ss_pred c--------cHHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----cCCCC
Confidence 2 1111111111234445999999999996 33333 45567789999999855542 22211
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+ ..|-++++||.-|-+|.|+||.++.|+ ++.+++..+.. .+.++|.=+|.-++++|+
T Consensus 184 D--~DiMLFT~SK~TGHAGSR~GWAlVKD~-------~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 184 D--HDIMLFTLSKLTGHAGSRFGWALVKDE-------EVAKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp ----SEEEEEHHHHCS-GGG-EEEEEES-H-------HHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred C--CceEEEEEecccCccccccceeeecCH-------HHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 1 228899999999999999999999875 48888888854 468999999999999986
No 299
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.42 E-value=4.2e-12 Score=122.74 Aligned_cols=174 Identities=11% Similarity=0.089 Sum_probs=125.7
Q ss_pred CCCCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCc
Q 021547 80 FNCYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-AKRNHI 157 (311)
Q Consensus 80 ~~~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~ 157 (311)
+.+...+.|. .+..+..|+.++ .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+. +.+.|+
T Consensus 166 LddL~~~eG~i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~G-d~VLvdRN~HKSv~hgaLiLsGa 237 (720)
T PRK13578 166 LGDLLIHEGAAKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPG-DLVLFDRNNHKSNHHGALIQAGA 237 (720)
T ss_pred CCCCCCCChHHHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHHcCC
Confidence 3344444554 466666666663 23467889999999999999999999 9999999999998885 899999
Q ss_pred EEEEeeccCCCCc----ccCH-----HHHHhhcCCC----------ccEEEEeCCCCCCccCCCHHHHHHHHHH-HHHhC
Q 021547 158 EVRHFDLLPERGW----EVDL-----EAVEALADEN----------TAAIVIINPCNPCGNVLTYQHLQKIAET-ARKLG 217 (311)
Q Consensus 158 ~~~~~~~~~~~~~----~~d~-----~~l~~~l~~~----------~~~i~i~~p~nptG~~~~~~~l~~l~~l-~~~~~ 217 (311)
.++++.... +.+ .++. +.+++.+.++ .+++++++|++ .|.+++ ++.|+++ ++.++
T Consensus 238 ~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~ 312 (720)
T PRK13578 238 TPVYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD 312 (720)
T ss_pred eEEEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC
Confidence 999987654 223 3454 4477766543 47889999875 788888 8888888 67778
Q ss_pred CEEEEeccccCC-ccCC----CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 218 ILVIADEVYGHL-AFGS----TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 218 ~~li~D~ay~~~-~~~~----~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
.|++||||+.. .|.. .+...+..-.++.-++++.|.+|. ++++.-+.++
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~L 366 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQI 366 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhh
Confidence 99999999864 4432 111112211223457999999998 5677666655
No 300
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.42 E-value=2e-12 Score=109.65 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=147.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--C------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--N------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
..++++|+.++ |.++..+|++.++-+.+++.-.. . +|.. -...|++.+|++. ..++.++
T Consensus 66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~il 132 (417)
T KOG1359|consen 66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTIL 132 (417)
T ss_pred ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceEE
Confidence 57899999998 56788999999999988873211 0 1221 3456788888888 4467888
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII 191 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~ 191 (311)
.+++-.|...++.+++.|. |.|+-..-.|.+..+.++... +.. ..|+-+++..+. .+-++++.-
T Consensus 133 ypscfdANag~feail~pe-dAvfSDeLNhASIIdGirLck-ry~----------h~dv~~l~~~l~~a~k~r~klv~TD 200 (417)
T KOG1359|consen 133 YPSCFDANAGAFEAILTPE-DAVFSDELNHASIIDGIRLCK-RYR----------HVDVFDLEHCLISACKMRLKLVVTD 200 (417)
T ss_pred eccccccchHHHHHhcChh-hhhhccccccchhhhhhHHHh-hhc----------cchhHHHHHHHHHhhhheEEEEEec
Confidence 9999999999999999999 999999888888766555443 111 135555555433 234444433
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCC-CCcceeeEEE
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWI-VPGWRFGWLA 269 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~-~~G~r~G~i~ 269 (311)
..-...|.+.| +++|.+++++||.++++||+|+...++.....+-..+...+ ..|..++++|++| +.| ||+.
T Consensus 201 g~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gytt 274 (417)
T KOG1359|consen 201 GVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTT 274 (417)
T ss_pred ceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCcc
Confidence 44578899988 99999999999999999999998777533333333333222 3588899999987 566 9998
Q ss_pred eeCCCCccchhhHHHHHhhh
Q 021547 270 TNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~ 289 (311)
+|.+ +++.+++.
T Consensus 275 gp~~--------li~llrqr 286 (417)
T KOG1359|consen 275 GPKP--------LISLLRQR 286 (417)
T ss_pred CChh--------HHHHHHhc
Confidence 8754 66666655
No 301
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.42 E-value=9.9e-12 Score=109.48 Aligned_cols=213 Identities=16% Similarity=0.171 Sum_probs=153.8
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-----MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-----~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.++--.+.++ |.+..-+|.+.++|.+.++.- ...+. +.+.-..+|++.+|++.. ++.-++.++
T Consensus 171 k~VtVWCSND---YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsS 239 (570)
T KOG1360|consen 171 KKVTVWCSND---YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSS 239 (570)
T ss_pred CceEEEecCc---cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------Ccceeeeee
Confidence 4444455555 456788999999999988631 11122 233445688999999984 455566666
Q ss_pred hHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeC
Q 021547 119 CMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIIN 192 (311)
Q Consensus 119 ~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~ 192 (311)
.--|.+..+.+|.+ || -.|+-....|.+....++..+..-..+.. + |++.|+++++. .+|+|.+.+
T Consensus 240 CfVANDstLftLak~lpg-cei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEt 311 (570)
T KOG1360|consen 240 CFVANDSTLFTLAKKLPG-CEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFET 311 (570)
T ss_pred eeeccchHHHHHHHHCCC-cEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEee
Confidence 66677777777754 78 88888888998888888888876554443 2 78888887753 588889999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
.+..+|.+.| +++|++++++||.+-++||+|+--.|+...-..-..-.- ..-.|+.+++.|+||+-| |||.+.
T Consensus 312 VhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat 385 (570)
T KOG1360|consen 312 VHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT 385 (570)
T ss_pred eeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh
Confidence 9999999999 999999999999999999999976665322111110000 001388999999999999 998875
Q ss_pred CCCCccchhhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~ 290 (311)
. ++++.++.+.
T Consensus 386 ~--------~LvDmiRSyA 396 (570)
T KOG1360|consen 386 R--------KLVDMIRSYA 396 (570)
T ss_pred h--------hHHHHHHHhc
Confidence 4 4888888873
No 302
>PRK07482 hypothetical protein; Provisional
Probab=99.42 E-value=3.3e-11 Score=113.34 Aligned_cols=251 Identities=14% Similarity=0.085 Sum_probs=154.9
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.+|||..|.-.... --.+|.+.+++.+++..... ..+. ....+.+..+++.+.+..+ -..+.++++++|
T Consensus 46 D~dG~~ylD~~sg~~~~~l-Gh~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sG 120 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNV-GYGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSG 120 (461)
T ss_pred ECCCCEEEEcccchhhhcC-CCCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCch
Confidence 3458999999887322211 23578999999999875321 1110 1123455556666655332 124689999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccCCCCc---c-----
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLPERGW---E----- 171 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~---~----- 171 (311)
++|++.+++.... +++.+|+.....|.+....+.. .+ ..+..++....... .
T Consensus 121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (461)
T PRK07482 121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ 200 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence 9999998887741 2346899888888774322211 11 01111211110000 0
Q ss_pred ---cCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 172 ---VDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 172 ---~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
-+++.+++.+. +++.++++.......|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++
T Consensus 201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~g 279 (461)
T PRK07482 201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYG 279 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcC
Confidence 13466677663 234455555546666776 467789999999999999999999999885555432 233444
Q ss_pred CCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
-.++++ +++|.++ .|. ++|.+++.+ ++.+.+.. ..+.+++.++++.+++.+.|+
T Consensus 280 v~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 342 (461)
T PRK07482 280 IEPDLI---TVAKGLT-SAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD 342 (461)
T ss_pred CCCCEE---EEccccc-cCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence 455556 5799964 464 899988753 35555542 133467889999988888764
No 303
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.41 E-value=6.6e-11 Score=111.35 Aligned_cols=221 Identities=12% Similarity=0.011 Sum_probs=131.2
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCC-CCCCCCcHHHHHHHH
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNC-YAPMFGLPLARRAVA 97 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~-Y~~~~g~~~lr~~ia 97 (311)
...+|++++..-.++ ....|+|=-.. -..++.+++++...+..-. ..+ |.....+.++++...
T Consensus 18 ~d~~~~~~i~~e~~~-----q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~ 86 (475)
T PLN03226 18 VDPEIADIIEKEKRR-----QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQ 86 (475)
T ss_pred cCHHHHHHHHHHHHH-----HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHH
Confidence 456777777643332 35667765554 2457889999888873211 112 333334455554333
Q ss_pred HHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEecC---CCCcchHHH---HHHcCcE--EE--Eeec
Q 021547 98 EYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILLPR---PGWPFYESF---AKRNHIE--VR--HFDL 164 (311)
Q Consensus 98 ~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~~~---p~~~~~~~~---~~~~g~~--~~--~~~~ 164 (311)
+...+.++ ...+.+.+ .++|+.|+..++.+|+++| |+|+..+ .+|...... .+..+.. +. .+..
T Consensus 87 ~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~pg-D~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~ 163 (475)
T PLN03226 87 KRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQPH-DRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL 163 (475)
T ss_pred HHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCCCC-CEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee
Confidence 33333333 22333333 3677889999999999999 9999844 233321111 1111221 11 3333
Q ss_pred cCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCccccc
Q 021547 165 LPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVF 242 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~ 242 (311)
+ .+++.+|+++|++.+.. ++++|++ ..++ +|...+ +++|.++|+++|.++++|++|..-... +....++.
T Consensus 164 ~-~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-- 235 (475)
T PLN03226 164 D-ESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-- 235 (475)
T ss_pred c-CCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC--
Confidence 2 24567999999998764 6665544 3333 667777 889999999999999999999863332 21112222
Q ss_pred CCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547 243 GSIVPVITLGSISKRW-IVPGWRFGWLATND 272 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~ 272 (311)
...++++|++|++ |..| |+|+++.
T Consensus 236 ---~~Div~~t~hK~L~GP~G---g~I~~~~ 260 (475)
T PLN03226 236 ---YCDVVTTTTHKSLRGPRG---GMIFFRK 260 (475)
T ss_pred ---CCeEEEecCcccccCCCc---eEEEEch
Confidence 1338899999997 3344 8877643
No 304
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.41 E-value=3.6e-11 Score=114.04 Aligned_cols=184 Identities=18% Similarity=0.123 Sum_probs=130.4
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCC-C---------C-CCCCEEEeCChHHHHHHHHHHHhc-----------------
Q 021547 81 NCYAPMFGLPLARRAVAEYLNRDLPY-K---------L-SADDIYITLGCMEAVEIILTVITR----------------- 132 (311)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~-~---------~-~~~~v~~t~g~~~a~~~~~~~l~~----------------- 132 (311)
..|..++...++++.+.+|+.+..+. + . ....-++|+|||.|+..++.+-..
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 35666778899999999999876531 1 1 112357789999988776655421
Q ss_pred ---------CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe--CCC
Q 021547 133 ---------LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII--NPC 194 (311)
Q Consensus 133 ---------~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~--~p~ 194 (311)
++ ..|+++.-.|......++..|+ +++.++.+ +++.+|++.|++.++ ++++.++++ ..+
T Consensus 199 ~~~~~~~~~~~-~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGt 275 (522)
T TIGR03799 199 FAALKHYGYDG-LAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGT 275 (522)
T ss_pred hhhhhhccCCc-eEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecC
Confidence 12 4688999999999999999998 68888874 457899999999875 355555554 446
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+.||.+.| +++|+++|+++|+|+++|.+|+....-...+. .+..+ ..-..+..|.+|+++.| ..+|.+++.++
T Consensus 276 t~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl--e~aDSit~d~HK~l~~P-~g~G~llvr~~ 349 (522)
T TIGR03799 276 TETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI--ERADSVTIDAHKQLYVP-MGAGMVLFKDP 349 (522)
T ss_pred cCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc--hhCCEEEEChhhcCCcC-cccEEEEEeCH
Confidence 79999999 99999999999999999999996432110000 01111 11236777999975444 66899888764
No 305
>PLN02271 serine hydroxymethyltransferase
Probab=99.40 E-value=1.2e-10 Score=109.10 Aligned_cols=222 Identities=13% Similarity=0.019 Sum_probs=145.4
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHH
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAE 98 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~ 98 (311)
...|.+++..-.+ +...-|+|=-.. -..++.+++++...+.+-.. ..|.....+.+++..-.+
T Consensus 133 Dpei~~li~~E~~-----rQ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~e 201 (586)
T PLN02271 133 DPDIHELMEKEKQ-----RQFKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCE 201 (586)
T ss_pred CHHHHHHHHHHHH-----HHhcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHH
Confidence 4566666653222 235556665443 23567888887766542111 123344455667666666
Q ss_pred HHhhcCCCCCCC--CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---------HHHcCcEEEEeeccC-
Q 021547 99 YLNRDLPYKLSA--DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---------AKRNHIEVRHFDLLP- 166 (311)
Q Consensus 99 ~l~~~~g~~~~~--~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---------~~~~g~~~~~~~~~~- 166 (311)
..++.||.+... -||..- +++.|+.+++.+|++|| |+|+..+..|.+.... +...|..+..+++..
T Consensus 202 ra~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PG-D~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d 279 (586)
T PLN02271 202 RALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPG-DRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVN 279 (586)
T ss_pred HHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCC-CEEEEecCCCCCchhcccccccccccccccceEEEEEcccc
Confidence 666666643211 356666 55779999999999999 9999987777654332 234555555554322
Q ss_pred CCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCC
Q 021547 167 ERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGS 244 (311)
Q Consensus 167 ~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~ 244 (311)
..++.+|.+++++ +...++++|++....+| ..++ ++++.++|+++|+++++|.+|.. +.-.+..+.++..
T Consensus 280 ~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~--- 351 (586)
T PLN02271 280 PQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY--- 351 (586)
T ss_pred cccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC---
Confidence 3456799999998 66779999888777788 5566 88999999999999999999985 3323322233322
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEee
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
..|+.+|.+|++ .|-|-|.|++.
T Consensus 352 --aDvvt~TTHKtL--rGPrGG~I~~r 374 (586)
T PLN02271 352 --CDIVTSTTHKSL--RGPRGGIIFYR 374 (586)
T ss_pred --CcEEEeCCcccC--CCCCceEEEec
Confidence 238999999985 56666888874
No 306
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.39 E-value=3.7e-12 Score=101.27 Aligned_cols=128 Identities=22% Similarity=0.318 Sum_probs=92.2
Q ss_pred chHHhhHHHHhhhhhHHHHHHHHHhh-hcc-CCCCCeeecCCCCCCC-------------CCCCCCcHHHHHHHHHHHhc
Q 021547 13 VKQELNREREAEVAAFRYAIVSLMES-VDK-NDPRPVIPLGHGDPAA-------------FPCFRTAAVAEDAIVDSVRS 77 (311)
Q Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~~~~i~~~~g~p~~-------------~~~~~~~~~~~~a~~~~~~~ 77 (311)
+|+++.-....+.+..+...+...+. +.+ ..+.++|+|+.++..+ .+.+.+++.+.+++.+.
T Consensus 9 ~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~--- 85 (153)
T PLN02994 9 LSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI--- 85 (153)
T ss_pred hhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---
Confidence 44444443344555666555554432 322 3577899999875310 02244444545555443
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc
Q 021547 78 SMFNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF 147 (311)
Q Consensus 78 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~ 147 (311)
..|.+..|.++||+++++|+++.+| +.+++++|++|+|++++++.++.+|+++| |.|++++|+|+.
T Consensus 86 ---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpG-D~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ---ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPG-DAFLVPTPYYAA 153 (153)
T ss_pred ---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCC-CEEEEeCCCCCC
Confidence 2588889999999999999999888 67889999999999999999999999999 999999999963
No 307
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.39 E-value=2.7e-11 Score=113.62 Aligned_cols=248 Identities=15% Similarity=0.082 Sum_probs=150.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.++||..|.-.. ..--.+|.+.+++.+++..... ..|. ..+.+..+++.+.+..+. ..+.++++++|+
T Consensus 79 ~dG~~ylD~~~g~~~~-~lGH~~p~v~~Ai~~ql~~l~~~~~~~----~~~~~~~lae~L~~~~p~--~~~~v~f~~SGs 151 (459)
T PRK11522 79 TQGQEFIDCLGGFGIF-NVGHRNPVVVSAVQNQLAKQPLHSQEL----LDPLRAMLAKTLAALTPG--KLKYSFFCNSGT 151 (459)
T ss_pred CCCCEEEECCcCHHhh-hcCCCCHHHHHHHHHHHhhCccccccc----CCHHHHHHHHHHHHhCCC--CCCEEEEeCCch
Confidence 3578888887762111 1123678999999999874321 1122 234455566666543321 236899999999
Q ss_pred HHHHHHHHHHhc----CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCCCC--cccCHHHHHhhcC------CC
Q 021547 121 EAVEIILTVITR----LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPERG--WEVDLEAVEALAD------EN 184 (311)
Q Consensus 121 ~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~~~--~~~d~~~l~~~l~------~~ 184 (311)
+|++.+++.... +|+.+|+.....|.+....+.. .+..... .+..+.-. ...|.+.+++.+. .+
T Consensus 152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence 999998887642 2335788888888875433322 2211110 11110000 0125677777664 23
Q ss_pred ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-
Q 021547 185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG- 262 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G- 262 (311)
+.++++.......|... |++.++++.++|++||+++|+||++.++...|. ......++-.++++ +++|.++ .|
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---t~gK~lg-gG~ 306 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHENVQPDIL---CLAKALG-GGV 306 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch-hhhhhccCCCCCEE---Eechhhh-CCC
Confidence 44555555566677754 666799999999999999999999987644443 22233333333444 8899965 46
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhh--h-hccccCCCchhHHHHHhhhh
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKA--C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.+++.. ++++.+.. + .+.+++.+|++.+++.+.|+
T Consensus 307 ~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~ 348 (459)
T PRK11522 307 MPIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATIN 348 (459)
T ss_pred ccceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHH
Confidence 6899999853 35555532 1 33456678888888776654
No 308
>PRK05965 hypothetical protein; Provisional
Probab=99.39 E-value=8.3e-11 Score=110.59 Aligned_cols=251 Identities=17% Similarity=0.141 Sum_probs=153.9
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.+|||..|--... .--.+|.+.+++.+++..... ..+. ....+.+..+++.+.+..+ -..+.++++++|
T Consensus 42 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sG 116 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVN-VGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERAP--GSLNHVYFTLGG 116 (459)
T ss_pred ECCCCEEEECcccHHhcc-CCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCh
Confidence 346899999987621111 123578999999999874321 1110 0112334456666654332 134689999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCc------------EEEEeeccCCC--CcccC----
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHI------------EVRHFDLLPER--GWEVD---- 173 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~--~~~~d---- 173 (311)
++|++.+++.... +++.+|+....+|.+....+ ...+. ....++..... .+.-+
T Consensus 117 SEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (459)
T PRK05965 117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAI 196 (459)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHH
Confidence 9999998887542 33468998888887653221 11111 01122211000 00112
Q ss_pred ----HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 174 ----LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 174 ----~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
++.+++.+. ++..++++...+...|.. .+++-++++.++|++||+++|.||+..++...|+ ......++-
T Consensus 197 ~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~gv 275 (459)
T PRK05965 197 IAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP-LFACEAEGV 275 (459)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch-hhhHhhcCC
Confidence 245666553 244555655556666774 5777799999999999999999999998865554 233344444
Q ss_pred CCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++ .++|.++ .| +++|.+++.+ ++++.+.. ..+.+++.+|++.+++.+.|+
T Consensus 276 ~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 337 (459)
T PRK05965 276 VPDLM---TVAKGLT-SGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR 337 (459)
T ss_pred CCCeE---Eechhhc-cCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 55556 6799964 57 5999999853 46666542 133467889999888877664
No 309
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.39 E-value=8.6e-12 Score=113.76 Aligned_cols=185 Identities=11% Similarity=-0.011 Sum_probs=121.7
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC-hHHHHHHHHHH
Q 021547 61 FRTAAVAEDAIVDSVRSS---MFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYITLG-CMEAVEIILTV 129 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g-~~~a~~~~~~~ 129 (311)
.+.|+.|+++|.+.+... .-..|... .-+.+.|+.++++++. -.+++|++|+| +|+++++++..
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHh
Confidence 467899999999887321 00112221 2245677778777742 14568999988 99999999999
Q ss_pred Hhc---CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC-HHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547 130 ITR---LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD-LEAVEALADENTAAIVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 130 l~~---~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~ 205 (311)
+.. +| |.|+. .+........++..|.+++.++.....++ .+ .+..+..+++++++|.+++..|.||..++
T Consensus 83 l~~~~~~~-~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--- 156 (355)
T cd00611 83 LLGDKGTA-DYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--- 156 (355)
T ss_pred cCCCCCeE-EEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence 987 44 55543 22222234477888999998886422122 13 33333445778999999999999999743
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++++.+|+++++|.+.+. |..+..+..++ +.+.|..|.+|.+| +|.++++.
T Consensus 157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~ 207 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK 207 (355)
T ss_pred -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH
Confidence 344558999999999986 22333443332 46677899988666 66666654
No 310
>PRK07678 aminotransferase; Validated
Probab=99.38 E-value=7.2e-11 Score=110.81 Aligned_cols=250 Identities=14% Similarity=0.017 Sum_probs=150.6
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|--... .-..+|.+.+++.+++....... .... .+....+++.+.+..+ ..+.++++++++
T Consensus 43 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGs 115 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVN-VGYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGS 115 (451)
T ss_pred eCCCCEEEEccccHHhhc-CCCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcH
Confidence 345899999987621111 12357899999999887432211 1111 2233445555554333 124799999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc-----cC
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE-----VD 173 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~-----~d 173 (311)
+|++.+++.... +|+.+|+.....|.+....+.. .+. .+..++...... +. .+
T Consensus 116 eA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK07678 116 EANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD 195 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHH
Confidence 999988887642 2446888888888775433322 111 112222111000 00 01
Q ss_pred ---HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 174 ---LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 174 ---~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
++.+++.+. +++.++++.......|.. .+++.++++.++|++||+++|.||++.++...|. ......++-.
T Consensus 196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~~~~~~gv~ 274 (451)
T PRK07678 196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK-AFGFMNYGVK 274 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch-hHHHHhcCCC
Confidence 123455453 345555555545556665 4677799999999999999999999988755553 2222334434
Q ss_pred CCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547 246 VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++ +++|.++...+++|.+++.+ ++++.+.. ....+++.++++.+++.+.|+
T Consensus 275 PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~ 334 (451)
T PRK07678 275 PDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE 334 (451)
T ss_pred CCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 4445 77999765337999999854 46666643 134567889998888887764
No 311
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.38 E-value=3.5e-11 Score=120.46 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=133.0
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEe
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS---SMFNCYAP----MFGLPLARRAVAEYLNRDLPYKLSAD--DIYIT 116 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~--~v~~t 116 (311)
.++.|+++.-. .+.+..+.+++.+.... +....|.. ..-+.+.|+.++++++ ++++ .|++|
T Consensus 34 ~~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFt 103 (805)
T PLN02724 34 GVVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFT 103 (805)
T ss_pred CCEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEe
Confidence 37888888622 23345666666555432 11111111 1235678888888884 3444 58999
Q ss_pred CChHHHHHHHHHHH-hcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCC------CCcccCH--HHHHhhc---
Q 021547 117 LGCMEAVEIILTVI-TRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPE------RGWEVDL--EAVEALA--- 181 (311)
Q Consensus 117 ~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~l--- 181 (311)
+|+|+++++++.++ .++| |+|++..-.|.+.. ..++..|++++.+++... ....++. +.|++.+
T Consensus 104 snaT~alnlva~~l~~~~g-d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 182 (805)
T PLN02724 104 SGATAALKLVGETFPWSSE-SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSK 182 (805)
T ss_pred CChHHHHHHHHHHCCCCCC-CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhh
Confidence 99999999999988 5788 99999887787654 344567899998876521 1122332 5566543
Q ss_pred -------CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh-----CCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 182 -------DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-----GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 182 -------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~-----~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
.++++++.+++.+|-||..+|.+.+..+.+.++.+ ++++++|.+++. |+-+..+..++. .+
T Consensus 183 l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~---Df 255 (805)
T PLN02724 183 LQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPA---DF 255 (805)
T ss_pred hccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCC---CE
Confidence 24568999999999999999955433333322222 367999999986 333344444433 38
Q ss_pred EEecCcccCCCCcceeeEEEeeC
Q 021547 250 TLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++.|++|++|.| ..+|++++..
T Consensus 256 l~~S~HK~~GgP-~G~G~L~vr~ 277 (805)
T PLN02724 256 VVVSFYKIFGYP-TGLGALLVRR 277 (805)
T ss_pred EEEecceeccCC-CCceEEEEeh
Confidence 999999998744 2367776653
No 312
>PRK06105 aminotransferase; Provisional
Probab=99.38 E-value=7.9e-11 Score=110.76 Aligned_cols=252 Identities=15% Similarity=0.087 Sum_probs=151.4
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.+|||..|.-... .--.+|.+.+++.++++.... ... .....+.+..+++.+.+..+. .-+.++++++|
T Consensus 44 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SG 118 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVA-LGFSEQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAPV--PMSKVFFTNSG 118 (460)
T ss_pred ECCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCc
Confidence 345899999987721111 123578999999999875321 111 111233444566666553321 23689999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCcc--------
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGWE-------- 171 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~~-------- 171 (311)
++|++++++.... +++.+|+.....|.+....+.. .+. .+..++......+.
T Consensus 119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 198 (460)
T PRK06105 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA 198 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence 9999999987531 3436888888887764322211 111 11112111000000
Q ss_pred ---cCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 172 ---VDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 172 ---~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
...+++++.+. .+..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|+- .....++
T Consensus 199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~-f~~~~~~ 277 (460)
T PRK06105 199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNM-FGCETFG 277 (460)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchh-hhHHhcC
Confidence 01345666552 234455555556666775 57888999999999999999999999877544532 2233333
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~ 309 (311)
-.++++ +++|.++...+++|.+++.+ ++++.+... ...+++.+|++.+++.+.|+
T Consensus 278 v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~ 340 (460)
T PRK06105 278 IKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA 340 (460)
T ss_pred CCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH
Confidence 333444 88999764336899999853 366665431 23467888998888776654
No 313
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.37 E-value=1.2e-10 Score=108.82 Aligned_cols=245 Identities=16% Similarity=0.088 Sum_probs=151.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|.-... .--.+|.+.+++.+++.......+ + .+.+..+++.+.+..+ ..+.+++++++++
T Consensus 50 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 50 VDGNKYIDYLAAYGPII-TGHAHPHITKAITEAAENGVLYGT-P----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCccCC-C----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 35888899877632111 123678899999999875432222 1 2334555555554332 2468999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCcEEE--------EeeccCCCC----cccCHHHHHhhcC---CC
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHIEVR--------HFDLLPERG----WEVDLEAVEALAD---EN 184 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~--------~~~~~~~~~----~~~d~~~l~~~l~---~~ 184 (311)
|++.+++.... .|+.+|+.....|.+....+.. .+.... .++.....+ ...|++.+++.+. .+
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 99998887653 4446888888888775433222 221110 000000000 0126788887764 24
Q ss_pred ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
..++++.......|... +++.+++|.++|++||+++|.||++.++. .+.. .....++-.++++ +++|.++ .|+
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~-~a~~~~gv~PDiv---t~gK~lg-gG~ 274 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYG-GAQDLLGVEPDLT---ALGKIIG-GGL 274 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcc-hhhHHhCCCCCee---eechhhc-CCC
Confidence 45555555566677655 67779999999999999999999999873 2211 1111222233333 8899974 579
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhh----hhccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKA----CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++|.++++. ++++.+.. ....+++.+|++.+++.+.|+
T Consensus 275 Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~ 316 (428)
T PRK12389 275 PIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLE 316 (428)
T ss_pred ceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHH
Confidence 999997742 46666642 233456789998888877664
No 314
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=9.7e-11 Score=110.07 Aligned_cols=247 Identities=11% Similarity=0.033 Sum_probs=147.0
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+++.++||..+... .++ .+|.+.+++.+++.... +....-..+.+..+++.+.+..+. ..+.+++++++++
T Consensus 70 dG~~ylD~~g~~~~---~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGse 141 (459)
T PRK06082 70 DGKKYMDFHGNNVH---QLGYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAGG--ELNRVLFAPGGTS 141 (459)
T ss_pred CCCEEEEcccHhhc---ccCCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCCC--CCCEEEECCCcHH
Confidence 47888998733221 122 78999999999987432 111111234455566666554331 2368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCC--cc-cC------HHHHH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERG--WE-VD------LEAVE 178 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~--~~-~d------~~~l~ 178 (311)
|++++++.... .|+.+|+.....|.+... .....+.. +..++...... +. .+ ++.++
T Consensus 142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (459)
T PRK06082 142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE 221 (459)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence 99998887643 343678887777776432 22222211 12222110000 00 01 24566
Q ss_pred hhcC--CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547 179 ALAD--ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256 (311)
Q Consensus 179 ~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 256 (311)
+.+. .+..++++....+..+...+++-+++|.++|++||+++|.||++.++...|.. .....++-.++++ .++|
T Consensus 222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~-fa~e~~gv~PDiv---~~gK 297 (459)
T PRK06082 222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEW-FTHQAYGIEPDIL---CIGK 297 (459)
T ss_pred HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchh-hHhHhhCCCCCEE---Eecc
Confidence 6664 24445555544555455778888999999999999999999999987545532 2223333333444 4899
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++...+++|.+++.+ ++...... ....+++.++++.+++.+.|+
T Consensus 298 gl~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (459)
T PRK06082 298 GLGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIE 343 (459)
T ss_pred cccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9764226999998853 23332221 112466788988888777664
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.36 E-value=9.8e-11 Score=110.12 Aligned_cols=250 Identities=18% Similarity=0.130 Sum_probs=145.0
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+++.+|||..|--....+. .+|.+.+++.++++.... +... .+..+....+++.+....+ ...+.++++++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 125 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGS 125 (460)
T ss_pred CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence 35889999877621111223 679999999999875321 1111 1223344445555544332 1236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchH-HHHHHcCcE-----------EEEeeccCC--CCccc-------
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYE-SFAKRNHIE-----------VRHFDLLPE--RGWEV------- 172 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~-~~~~~~g~~-----------~~~~~~~~~--~~~~~------- 172 (311)
+|++.+++.... ++...|+....+|.+.. ......+.. +..++.... ..+..
T Consensus 126 eA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (460)
T PRK12403 126 EANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGR 205 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 999999988752 33134555555666542 222222211 222221100 00011
Q ss_pred -CHHHHHhhc-C---CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 173 -DLEAVEALA-D---ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 173 -d~~~l~~~l-~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
..+.+++.+ + ++..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++-.+
T Consensus 206 ~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~e~~gv~P 284 (460)
T PRK12403 206 RAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF-AHEHFGFEP 284 (460)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-hhhhcCCCC
Confidence 124455543 2 234455555556666765 467779999999999999999999998875555322 223333333
Q ss_pred CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh----h-hccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA----C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ +++|.++ .| +.+|.+++.. ++++.+.. + .+.+++.+|++.+++.+.|+
T Consensus 285 Div---~~gK~lg-gG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~ 341 (460)
T PRK12403 285 DTL---SIAKGLT-SGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK 341 (460)
T ss_pred CeE---EEccccc-ccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 444 4899965 47 4899988743 35565532 1 23466788888888877664
No 316
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.36 E-value=1.2e-10 Score=109.24 Aligned_cols=250 Identities=15% Similarity=0.047 Sum_probs=152.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|--.. ..--.+|.+.+++.+++...... ....-..+.+..+++.+.+..+. ..+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGse 125 (453)
T PRK06943 51 RDGRRYLDAISSWWVN-LFGHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGG--TLGHAFFASDGAS 125 (453)
T ss_pred CCCCEEEEcchHHHHh-cCCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHH
Confidence 3588899997662111 11235789999999998743210 00011123445566666553331 2258999999999
Q ss_pred HHHHHHHHHh-------cCCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------
Q 021547 122 AVEIILTVIT-------RLGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE-------- 171 (311)
Q Consensus 122 a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~-------- 171 (311)
|++.+++... .+|+.+|+....+|.+....+.. .+. .+..++...... +.
T Consensus 126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (453)
T PRK06943 126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA 205 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence 9999888763 13447899888888764321111 110 122222211000 00
Q ss_pred cCHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 172 VDLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 172 ~d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
-+++.+++.+. ++..++++.. .+...|. ..+++.++++.++|++||+++|.||++.++...|. ......++-.+
T Consensus 206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~-~fa~~~~gv~P 284 (453)
T PRK06943 206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT-FFACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc-hhHHHhCCCCC
Confidence 12456666664 3455566655 3666677 45777899999999999999999999988755553 22333344445
Q ss_pred CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ .++|.++ .| +++|.+++.+ ++.+.+.. ....+++.++++.+++.+.|+
T Consensus 285 Div---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (453)
T PRK06943 285 DFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD 343 (453)
T ss_pred CeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH
Confidence 556 5699965 58 5999999854 36665542 133466789999888887764
No 317
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.35 E-value=1.9e-10 Score=107.63 Aligned_cols=251 Identities=16% Similarity=0.118 Sum_probs=148.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.++||..|.-.. ..-..+|.+.+++.+++..-. ...+. ...+.+..+++.+.+..+ -..+.|+++++|
T Consensus 42 D~dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~ql~~l~~~~~~~---~~~~~~~~la~~l~~~~p--~~~~~v~f~~sG 115 (442)
T PRK13360 42 THDGRRVLDGTAGLWCV-NAGHGRPEIVEAVRAQAGELDYAPAFQ---MGHPKAFELANRIAEIAP--GGLNHVFFTNSG 115 (442)
T ss_pred eCCCCEEEECchhHHHh-ccCCCCHHHHHHHHHHHHhCCCcccCC---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence 34588999997662111 112367899999999987421 11111 112334455565554332 123589999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHH-HcC------------cEEEEeeccCC--C-Cccc----
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAK-RNH------------IEVRHFDLLPE--R-GWEV---- 172 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~-~~g------------~~~~~~~~~~~--~-~~~~---- 172 (311)
++|++.+++.... +++.+|+.....|.+....+. ..| ..+..+|.... . .+..
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 195 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE 195 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence 9999988886542 233689988888877532211 111 11222222110 0 0111
Q ss_pred ----CHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 173 ----DLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 173 ----d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
..+.+++.+. ++..++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++
T Consensus 196 ~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~g 274 (442)
T PRK13360 196 HGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFG 274 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcC
Confidence 1356666663 234445555546666775 467779999999999999999999997764444332 222333
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
-.++++ +++|.++...+++|.+++++ ++++.+.. ..+.++..++++.+++.+.|+
T Consensus 275 v~PDiv---t~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~ 337 (442)
T PRK13360 275 VTPDLL---TCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD 337 (442)
T ss_pred CCCcee---eeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 333333 88999754337899988753 35555532 123456778888887777654
No 318
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=1.3e-10 Score=109.16 Aligned_cols=248 Identities=16% Similarity=0.103 Sum_probs=146.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.+++.++||..|--... .--.+|.+.+++.+++...... .|.. .+.+..+++.+.+..+ ...+.++++++|
T Consensus 50 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG 122 (457)
T PRK05639 50 VDGNVFIDFLAGAAAAS-TGYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG 122 (457)
T ss_pred CCCCEEEECCcCHHhhc-cCCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence 35888999987731111 1236788999999998742211 1222 2334445555554332 123689999999
Q ss_pred HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCC--cc----cCH----
Q 021547 120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERG--WE----VDL---- 174 (311)
Q Consensus 120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~--~~----~d~---- 174 (311)
++|++.+++.... .|+.+|+.....|.+....+.. .+. .+..+|...... +. -+.
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 9999998887653 4446888888888765432221 111 122333211000 00 012
Q ss_pred ----HHHHhhc------CCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 175 ----EAVEALA------DENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 175 ----~~l~~~l------~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
+.+++.+ ..+..++++...+...|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~g 281 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHH-HHHhcC
Confidence 2344433 2345555555556666774 467779999999999999999999998865445321 222233
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
-.++++ .++|.++ .|..+|.+++.. ++++........++..+|++.+++.+.|+
T Consensus 282 v~PDiv---~~gK~l~-gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~ 335 (457)
T PRK05639 282 VKPDLI---IFGKGVA-SGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLE 335 (457)
T ss_pred CCCCEE---Eechhhc-CCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHH
Confidence 333444 3899965 479999999853 35552222222456778887777766653
No 319
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.34 E-value=1.2e-10 Score=108.46 Aligned_cols=247 Identities=14% Similarity=0.046 Sum_probs=147.2
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++.......+. .+.+..+++.+.+..+ ...+.++++++|+
T Consensus 49 D~dG~~yiD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGs 120 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLI-HGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGT 120 (433)
T ss_pred ECCCCEEEEcccchhccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 345888999987632211 1236789999999998754321111 2234445555554332 1236899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHH---H-HHcCcE---E-EEeeccCCCCc-----ccCHHHHHhhcCC---
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESF---A-KRNHIE---V-RHFDLLPERGW-----EVDLEAVEALADE--- 183 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~---~-~~~g~~---~-~~~~~~~~~~~-----~~d~~~l~~~l~~--- 183 (311)
+|++.+++.... .|+.+|+....+|.+.... . ...+-. . ......+.... .-|++.+++.+..
T Consensus 121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 200 (433)
T PRK00615 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH 200 (433)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC
Confidence 999998887653 4546888888888774311 1 111100 0 00000000000 1267788877642
Q ss_pred CccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 184 NTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
+..++++.......|... +++.+++|.++|++||+++|+||++.++ ..|. ......++-.++++ +++|.++ .|
T Consensus 201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~-~ga~~~~gv~PDi~---~~gK~lg-gG 274 (433)
T PRK00615 201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ-GGAAAIYHVKPDIT---VYGKILG-GG 274 (433)
T ss_pred ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH-hHHHHhcCCCCCeE---EEccccc-CC
Confidence 344445444455567655 5677999999999999999999999776 3332 22222232233333 5899975 46
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
+.+|+++++. ++++.+... ...++..+|++.+++.+.|+
T Consensus 275 ~p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~ 317 (433)
T PRK00615 275 LPAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASIN 317 (433)
T ss_pred cceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHH
Confidence 8899998853 366666421 22355678888777777664
No 320
>PRK07046 aminotransferase; Validated
Probab=99.33 E-value=3.2e-10 Score=106.35 Aligned_cols=233 Identities=17% Similarity=0.145 Sum_probs=146.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++..+|||..|.-.. ..--.+|.+.+++.+++.......+. .+....+++.+.+.. ..+.+.+++++++|
T Consensus 73 DG~~yiD~~~g~g~~-~lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA 142 (453)
T PRK07046 73 DGHRYDDFCLGDTGA-MFGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDA 142 (453)
T ss_pred CCCEEEEeccccccc-ccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence 477888887663111 11236789999999998864332221 234455555555433 24689999999999
Q ss_pred HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH---cCc----------------EEEEeeccCCCCcccCHHHHHhhcC
Q 021547 123 VEIILTVITR-LGAANILLPRPGWPFYESFAKR---NHI----------------EVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~---~g~----------------~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
...+++.... .|+++|+....+|.+....... .+. .+..++ + -|++.+++.+.
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-nd~~~l~~~l~ 215 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F-NDLAALEAALA 215 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-CCHHHHHHHhC
Confidence 9988887653 4557899888888876322111 110 011111 1 27888888875
Q ss_pred C-CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccC
Q 021547 183 E-NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 183 ~-~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
. +..++++.......|.. .+++.++++.++|++||+++|.||+.. +. +++. ...++-.++++ +++|.+
T Consensus 216 ~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~----~~~~gv~PDi~---t~gK~l 287 (453)
T PRK07046 216 DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY----TRAHGLEPDFL---VVGKPI 287 (453)
T ss_pred CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch----hHHhCCCccce---eehhhh
Confidence 4 44444444434444554 456779999999999999999999986 32 2221 12222233334 689997
Q ss_pred CCCcceeeEEEeeCCCCccchhhHHHHHhhh----------hccccCCCchhHHHHHhhhh
Q 021547 259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ .|+++|.+++.. ++++.+... .+.+++.++++.+++.+.|+
T Consensus 288 g-gG~Pi~av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~ 339 (453)
T PRK07046 288 A-GGVPCAVYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA 339 (453)
T ss_pred c-CCCcceeeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH
Confidence 5 589999988743 467766521 23366788998888877664
No 321
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.33 E-value=2.6e-10 Score=103.18 Aligned_cols=238 Identities=17% Similarity=0.158 Sum_probs=157.0
Q ss_pred cCCCCCeeecCCC-CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHG-DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+.++..+|||..+ .|..+ --.+|.+.++++++++.+. .|..+ .++.-.+|+.+.+..+ ..+.|-+++++
T Consensus 49 DvDGn~YIDy~~~~Gp~il--GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSG 118 (432)
T COG0001 49 DVDGNEYIDYVLGWGPLIL--GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSG 118 (432)
T ss_pred eCCCCEeeehhccCccccc--CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecch
Confidence 3468899999988 34433 2357889999999998764 56653 2455556666666443 44889999999
Q ss_pred HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHH-HHcCcE-------------------EEEeeccCCCCcccCHHHHH
Q 021547 120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFA-KRNHIE-------------------VRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~-~~~g~~-------------------~~~~~~~~~~~~~~d~~~l~ 178 (311)
|+|...+++.-.. .|+|+|+...-+|.+..+.+ ...|-. +..+|. -|++.++
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~ 191 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALE 191 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHH
Confidence 9999888877653 45589999998888755433 222211 222222 2788888
Q ss_pred hhcCC---CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547 179 ALADE---NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI 254 (311)
Q Consensus 179 ~~l~~---~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 254 (311)
+++.+ +..+|++.......|.+ ..++.++.|.++|+++|+++|.||+.-++...-...... +.-.++ +.++
T Consensus 192 ~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~--~gi~PD---lttl 266 (432)
T COG0001 192 EAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY--YGVEPD---LTTL 266 (432)
T ss_pred HHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccc--cCcCcc---hhhh
Confidence 88765 34444444434445564 455669999999999999999999998765430011111 111222 3489
Q ss_pred cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
.|. ...|+++|.+-+.. ++++.+... +..+.+.+|++.+|..+.|+
T Consensus 267 GKi-IGGGlP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~ 316 (432)
T COG0001 267 GKI-IGGGLPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLE 316 (432)
T ss_pred hhh-hcCCcceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHH
Confidence 999 46799999987742 577766543 33457788888877766654
No 322
>PRK06062 hypothetical protein; Provisional
Probab=99.32 E-value=2.1e-10 Score=107.59 Aligned_cols=250 Identities=18% Similarity=0.143 Sum_probs=151.9
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++..... +.. .-..+.+..+++.+.+..+ -..+.|+++++++
T Consensus 49 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 122 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTN-IGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGA 122 (451)
T ss_pred ECCCCEEEEcccCHHhhc-CCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChH
Confidence 335889999987621111 123578899999999874321 111 1123445556666654332 1236899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-----------EEEEeeccCCCC--cc--cC-------HHH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-----------EVRHFDLLPERG--WE--VD-------LEA 176 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~~~--~~--~d-------~~~ 176 (311)
+|++.+++.... .|+.+|+.....|.+....+.. .+. .+..++...... +. -+ ++.
T Consensus 123 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06062 123 DANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAH 202 (451)
T ss_pred HHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHH
Confidence 999998887653 4446888888888765433322 111 111111110000 10 12 566
Q ss_pred HHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEE
Q 021547 177 VEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITL 251 (311)
Q Consensus 177 l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i 251 (311)
+++.++ ++..++++.......|.. .+++-+++|.++|++||+++|+||++.++...|.. .....++-.++++
T Consensus 203 le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~-~a~~~~gv~PDi~-- 279 (451)
T PRK06062 203 LERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKW-FAIEHFGVVPDLI-- 279 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHH-HHHHhcCCCCCee--
Confidence 677664 234455555545566776 46777999999999999999999999986444432 1222233333434
Q ss_pred ecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547 252 GSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 252 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .| +++|.+++.+ ++++.+... ...+++.+|++.+++.+.|+
T Consensus 280 -t~gK~lg-gG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 280 -TFAKGVN-SGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATIN 331 (451)
T ss_pred -eechhhh-cCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 7899965 46 5999999854 366666422 33466778888888777664
No 323
>PRK06149 hypothetical protein; Provisional
Probab=99.32 E-value=2.7e-10 Score=116.13 Aligned_cols=244 Identities=16% Similarity=0.107 Sum_probs=145.1
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNC-YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++.++||..|.. .++ .+|.+.+++.+++....... |. .+....+++.+.+... -..+.++++++|+
T Consensus 583 dG~~ylD~~~~~~----~lGh~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~elae~L~~~~p--~~~~~v~f~~SGs 651 (972)
T PRK06149 583 AGRSYLDMVNNVT----VLGHGHPRLAAAAARQWSLLNTNSRFH-----YAAVAEFSERLAALAP--DGLDTVFLVNSGS 651 (972)
T ss_pred CCCEEEECCCCcc----ccCCCCHHHHHHHHHHHHhcccccccc-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 4888999986642 234 78999999999887432211 21 1233444555544322 1236899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C-----c--------EEEEeeccCCC--Ccc-cC-----HHHH
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H-----I--------EVRHFDLLPER--GWE-VD-----LEAV 177 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~~--~~~-~d-----~~~l 177 (311)
+|++.+++.... .|+.+|+.....|.+....+... + . .+..++..... .+. .+ .+++
T Consensus 652 EA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 652 EANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 999998885432 34367887777777543221110 0 0 01222211100 011 11 1333
Q ss_pred HhhcC------CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 178 EALAD------ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 178 ~~~l~------~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
++.++ .++.++++.......| ...+++-++++.++|++||+++|.||++.++...|..+..+..++-.++++
T Consensus 732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv- 810 (972)
T PRK06149 732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII- 810 (972)
T ss_pred HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE-
Confidence 33221 2344445444444444 456778899999999999999999999977655554333444444344444
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--hhccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .|..+|.+++.. ++++.+.. ....+.+.+|++.+++.+.|+
T Consensus 811 --t~gK~lg-~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~ 860 (972)
T PRK06149 811 --TMAKGMG-NGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLD 860 (972)
T ss_pred --Eeccccc-CCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence 8899975 689999999854 36666643 222345788988888887764
No 324
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.32 E-value=2.9e-10 Score=106.55 Aligned_cols=252 Identities=16% Similarity=0.110 Sum_probs=148.0
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++++|||..|--... .--.+|.+.+++.+++..... +....-..+.+..+++.+.+..+. ..+.|+++++|+
T Consensus 45 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGs 119 (445)
T PRK09221 45 DADGRKILDGTAGLWCCN-AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAPG--GLDHVFFTNSGS 119 (445)
T ss_pred eCCCCEEEEccccHhhcc-CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcH
Confidence 346889999987621111 123678899999998874211 111001123344466666543321 236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccC-CC--Cccc-----
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLP-ER--GWEV----- 172 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~-~~--~~~~----- 172 (311)
+|++.+++.... +++.+|+.....|.+....+.. .+ ..+..++... .. .+..
T Consensus 120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence 999998876542 2336899888888765322111 11 1122222210 00 0000
Q ss_pred ---CHHHHHhhcC----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 173 ---DLEAVEALAD----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 173 ---d~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
..+++++.+. ++..++++.......|... +++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv 278 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGV 278 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCC
Confidence 1345666553 2445556665566777754 56679999999999999999999998765444322 2223332
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+++ .+++|.++...+++|.+++++ ++++.+.. + .+.+++.++++.+++.+.|+
T Consensus 279 ~PDi---~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~ 340 (445)
T PRK09221 279 TPDI---ITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD 340 (445)
T ss_pred CCCE---EEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH
Confidence 3333 388999754337899988753 35555532 1 23456778888777776653
No 325
>PRK07481 hypothetical protein; Provisional
Probab=99.32 E-value=3.8e-10 Score=105.90 Aligned_cols=253 Identities=14% Similarity=0.070 Sum_probs=150.3
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++......... .....+.+..+++.+....+. -..+.++++++|+
T Consensus 38 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGs 114 (449)
T PRK07481 38 DIDGKKLLDGVGGLWNVN-VGHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGS 114 (449)
T ss_pred eCCCCEEEECchhHHhhc-CCCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchH
Confidence 346889999976621111 1235788999999998753211100 001223445566666553321 1245899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC-c------------EEEEeeccCCC--Ccc-cCHHH-
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH-I------------EVRHFDLLPER--GWE-VDLEA- 176 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g-~------------~~~~~~~~~~~--~~~-~d~~~- 176 (311)
+|++.+++.... +|+.+|+.....|.+....+.... . .+..++..... .+. .|.+.
T Consensus 115 EAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~ 194 (449)
T PRK07481 115 DSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEEL 194 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHH
Confidence 999998887642 344689988888887543222211 1 11222111000 011 13333
Q ss_pred -------HHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 177 -------VEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 177 -------l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
+++.+. +++.++++...+...|.. .+++.++++.++|++||+++|.||++.++...|..+ ....++-
T Consensus 195 ~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv 273 (449)
T PRK07481 195 ARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWF-GSRGWGV 273 (449)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhh-HhhhcCC
Confidence 333332 345555655556666774 567779999999999999999999999875555322 2233333
Q ss_pred CCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++ .++|.++ .| +++|.+++.+ ++++.+.. ..+.+++.++++.+++.+.|+
T Consensus 274 ~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~ 335 (449)
T PRK07481 274 KPDIM---CLAKGIT-SGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLD 335 (449)
T ss_pred CCCEE---EEeeccc-CCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 44455 6699864 46 6999999853 36666642 133466789998888777654
No 326
>PRK07480 putative aminotransferase; Validated
Probab=99.32 E-value=2.9e-10 Score=106.79 Aligned_cols=252 Identities=16% Similarity=0.117 Sum_probs=150.4
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.+|||..|.-... .-..+|.+.+++.+++....... .......+.+..+++.+....+ ...+.++++++|+
T Consensus 46 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 121 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVN-VGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGS 121 (456)
T ss_pred eCCCCEEEEccchHHHhc-CCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence 345889999987621111 12357899999999987532110 0001123445556666654332 2346899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCcE------------EEEeeccCCC--CcccC-----
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHIE------------VRHFDLLPER--GWEVD----- 173 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~--~~~~d----- 173 (311)
+|++.+++.... +|+.+|+.....|.+..... ...+.. +..++..... .+..+
T Consensus 122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (456)
T PRK07480 122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG 201 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence 999998876642 34367888888777643221 111110 1111110000 00011
Q ss_pred ---HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 174 ---LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 174 ---~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
.+.+++.+. .+..++++...+...|.. .+++.+++|.++|++||+++|.||++.++...|. ......++-.
T Consensus 202 ~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~ 280 (456)
T PRK07480 202 LAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE-WFGSQHFGIK 280 (456)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc-hhhhhhcCCC
Confidence 245554332 345556666556666775 4666799999999999999999999988754453 2223334434
Q ss_pred CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh----h-hccccCCCchhHHHHHhhhh
Q 021547 246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA----C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++ +++|.++ .| +++|.+++.+ ++++.+.. + .+.+++.+|++.+++.+.|+
T Consensus 281 PDiv---~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 281 PDLM---TIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR 338 (456)
T ss_pred CCee---eeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 4444 7799865 46 4899999853 36666621 2 33567889999999888774
No 327
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.31 E-value=2.3e-11 Score=111.91 Aligned_cols=191 Identities=14% Similarity=0.051 Sum_probs=123.3
Q ss_pred eeecCCCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHH
Q 021547 47 VIPLGHGDPAAFPCFRTAAV-AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVE 124 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~-~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~ 124 (311)
...|+.|- ..+++. +++++.............-..-+.+.|+.++++++ .+ +.++|++++ |+|.+++
T Consensus 13 ~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~----~~-~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 13 DPRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLS----LP-EGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEEECCchHHHHH
Confidence 45576664 345666 99998865432111011112234556666666663 21 345788775 8999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcc-hHH-HHHHcCc-EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 125 IILTVITRLGAANILLPRPGWPF-YES-FAKRNHI-EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
+++..+.+++.+.|+. .-.|.. +.. ..+..|. +++.++.. .+..+|+++++. ++.+.+++..|.||..+
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRV 153 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceec
Confidence 9999998754155554 445554 222 3356788 88887653 334566665432 56788999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATND 272 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~ 272 (311)
| +++|++ +++|+++++|.+++.. ..+..+..+ .+++.|.+|+++. +| +|++.++.
T Consensus 154 p---i~~I~~--~~~g~~~vVDa~qs~G----~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~ 209 (378)
T PRK03080 154 P---VARWIG--ADREGLTICDATSAAF----ALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP 209 (378)
T ss_pred c---chhhcc--ccCCCeEEEecccccc----cCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH
Confidence 9 777777 7889999999999862 233333332 2999999998765 45 67766653
No 328
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.31 E-value=1.6e-10 Score=101.50 Aligned_cols=177 Identities=19% Similarity=0.241 Sum_probs=113.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEe-cCCCCcchHHHH----------HHcCc
Q 021547 92 ARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILL-PRPGWPFYESFA----------KRNHI 157 (311)
Q Consensus 92 lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~-~~p~~~~~~~~~----------~~~g~ 157 (311)
=|+.+.+.+.+.+| .+.-++ -.++|+|+..++.++++|| |+.+. ...-|......+ +..|+
T Consensus 55 GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpG-D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi 129 (403)
T PF06838_consen 55 GRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPG-DELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI 129 (403)
T ss_dssp HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT--EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred cHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCC-CeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence 35555555555443 344555 4678999999999999999 99885 444555444433 56678
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC-CCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCC
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGST 234 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~ 234 (311)
....+++. +++.+|.+.+++.+++++|+++|.. ..+.+-..++.++++++++++++. +++++||++|++|+-..+
T Consensus 130 ~Y~~v~L~--~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E 207 (403)
T PF06838_consen 130 KYREVPLT--EDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE 207 (403)
T ss_dssp EEEE--B---TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-
T ss_pred eeEEEeec--CCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC
Confidence 88888876 4467999999999999999999985 467777789999999999999976 799999999999874432
Q ss_pred CCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 235 PYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
| .. .. -.+..+|+-|+.|..= .--|||++. .++++++....
T Consensus 208 P-~~---vG---ADl~aGSLIKNpGGgiAptGGYIaGr--------~~lVe~~a~RL 249 (403)
T PF06838_consen 208 P-TE---VG---ADLMAGSLIKNPGGGIAPTGGYIAGR--------KDLVERAAYRL 249 (403)
T ss_dssp G-GG---GT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHHHHHHHHH
T ss_pred c-cc---cc---hhheeccceeCCCCCccCcCCEEech--------HHHHHHHHhhh
Confidence 2 22 12 2299999999965431 223788774 25787766543
No 329
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.31 E-value=3.2e-11 Score=109.15 Aligned_cols=250 Identities=18% Similarity=0.144 Sum_probs=152.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-... .--.+|.+.+++++++..... ........+.+..+++.+.+..+. ..+.+++++++++
T Consensus 13 ~dG~~~lD~~~~~~~~~-lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGse 87 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVN-LGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSE 87 (339)
T ss_dssp TTSEEEEESSHHHHTTT-T-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHH
T ss_pred CCCCEEEECCCCcccee-cCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhcccc--ccceeeeccCchH
Confidence 35888999986521111 122468999999998875322 222333445667777777765532 4578999999999
Q ss_pred HHHHHHHHHh-------cCCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccCCCC---cccCHHHHH
Q 021547 122 AVEIILTVIT-------RLGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLPERG---WEVDLEAVE 178 (311)
Q Consensus 122 a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~---~~~d~~~l~ 178 (311)
|++.+++... .+++.+|+....+|.+....... .+ ..+..+|...... ..-..+.++
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 167 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE 167 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence 9999888876 24558999999888764322222 11 1234444321000 000011122
Q ss_pred h----hcCCCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547 179 A----LADENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS 253 (311)
Q Consensus 179 ~----~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s 253 (311)
+ .-.++..++++.......|... +++-+++|.++|++||+++|.||++.++...|+ +.....+.-.++++ +
T Consensus 168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~-~~a~~~~gv~PDiv---~ 243 (339)
T PF00202_consen 168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK-FFASEHYGVDPDIV---T 243 (339)
T ss_dssp HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS-SSGHHHHTSSSSEE---E
T ss_pred HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC-ccceecccccCccc---c
Confidence 2 2233555556555555566544 666799999999999999999999999866664 33334444444555 4
Q ss_pred CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++|.++ .|+.+|.+++.. ++.+.+... .+.++..++++.+++.+.|+
T Consensus 244 ~gK~l~-gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 244 FGKGLG-GGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp EEGGGG-TTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred cccchh-hhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHH
Confidence 569965 469999999864 355555333 33567788888888877664
No 330
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.30 E-value=4.2e-10 Score=108.97 Aligned_cols=171 Identities=13% Similarity=0.049 Sum_probs=121.9
Q ss_pred CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547 82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160 (311)
Q Consensus 82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~ 160 (311)
+...+.|. .+..+..|+.++ .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+.+...|+.++
T Consensus 189 dLl~~~G~i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~G-d~VLvdRN~HKSv~~aLilsga~PV 260 (713)
T PRK15399 189 SLLDHTGPHLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAG-STLLIDRNCHKSLAHLLMMSDVVPI 260 (713)
T ss_pred CCCCCChHHHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeeE
Confidence 44444454 566677777773 23467889999999999999999999 9999999999999999999999999
Q ss_pred EeeccCCCCc----ccCH-----HHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEecc
Q 021547 161 HFDLLPERGW----EVDL-----EAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV-IADEV 225 (311)
Q Consensus 161 ~~~~~~~~~~----~~d~-----~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l-i~D~a 225 (311)
++.... +.+ .++. +.+++.+.+ +++++++++|+ -.|.+++ ++.|++.| |+.+ ++|||
T Consensus 261 Yl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 261 WLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred Eecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEecc
Confidence 987543 222 3444 888887753 23578888885 4899998 66677766 5666 69999
Q ss_pred ccCC-ccCC-CC-CCccccc-CCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 226 YGHL-AFGS-TP-YIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 226 y~~~-~~~~-~~-~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
|+.+ .|.. .+ ...+... ..+..++.+.|.+|. ++++.-+.++-
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iH 379 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIH 379 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeee
Confidence 9864 3432 11 2223221 123346779999998 57777776553
No 331
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=2.4e-10 Score=106.38 Aligned_cols=249 Identities=17% Similarity=0.072 Sum_probs=148.8
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-... .--.+|.+.+++.++++......+.. -..+.+..+++.+.+..+ ...+.++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 110 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAA-HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGS 110 (422)
T ss_pred ECCCCEEEEcchhHHHhc-CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcH
Confidence 346899999977622111 12357899999999987532211110 012334445555554322 1236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCCcccC------
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERGWEVD------ 173 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d------ 173 (311)
+|++.+++.... +++.+|+.....|.+....+... +. ....+|..... ..+
T Consensus 111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~ 188 (422)
T PRK05630 111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVR--GSSPQEISE 188 (422)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCccc--CCChHHHHH
Confidence 999988887542 23367998888888643322211 10 11222221100 111
Q ss_pred -HHHHHhhcCCCccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 174 -LEAVEALADENTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 174 -~~~l~~~l~~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
.+.+++.+.++..++++... +...|.. .+.+.+++|.++|++||+++|+||++.++...|. ......++-.++++
T Consensus 189 ~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~gv~PDi~- 266 (422)
T PRK05630 189 YLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE-LFATLAAGVTPDIM- 266 (422)
T ss_pred HHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch-hhHHHhcCCCCCee-
Confidence 23445555556666666653 6667774 4677799999999999999999999987754443 22222233333344
Q ss_pred EecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .| ..+|+++++. ++.+.+.. ....++..+|++.+++.+.|+
T Consensus 267 --t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~ 322 (422)
T PRK05630 267 --CVGKALT-GGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLE 322 (422)
T ss_pred --eeechhh-cCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHH
Confidence 7899853 46 5889988753 35665532 123456788888887777654
No 332
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=4.4e-10 Score=105.72 Aligned_cols=250 Identities=15% Similarity=0.059 Sum_probs=150.2
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|.-.. ..--.+|.+.+++.+++..-.. .....-..+.+..+++.+.+..+ ...+.+++++++++
T Consensus 53 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 127 (460)
T PRK06916 53 VNGNEYYDGVSSIWLN-VHGHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGAT 127 (460)
T ss_pred CCCCEEEEcchhHHHh-hcCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 3588888987652110 0123578899999999874211 00000112334455555554332 12358999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCC--Ccc--------
Q 021547 122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPER--GWE-------- 171 (311)
Q Consensus 122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~-------- 171 (311)
|++.+++.... +|+.+|+.....|.+....+.. .+. ....+|..... .+.
T Consensus 128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 207 (460)
T PRK06916 128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK 207 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99998887652 4547899888888775432222 111 11222211000 000
Q ss_pred cCHHHHHhhcC---CCccEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 172 VDLEAVEALAD---ENTAAIVIIN-PCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 172 ~d~~~l~~~l~---~~~~~i~i~~-p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
.+++.+++.++ ++..++++.. +....|.. .+++.++++.++|++||+++|.||++.++...|.. .....++-.+
T Consensus 208 ~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~-~a~~~~gv~P 286 (460)
T PRK06916 208 KHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKM-FACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchh-hHHHhcCCCC
Confidence 12455666664 3455556555 36666765 58888999999999999999999999877544532 2223333344
Q ss_pred CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ +++|.++ .| +++|.+++.+ ++++.+.. ..+.+++.++++.+++.+.|+
T Consensus 287 Div---~~gK~l~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 346 (460)
T PRK06916 287 DIM---TAGKGLT-GGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE 346 (460)
T ss_pred Cee---eeehhhh-cCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH
Confidence 444 6799965 57 5999999854 35555431 123456678888887777654
No 333
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.30 E-value=3.1e-10 Score=112.62 Aligned_cols=179 Identities=15% Similarity=0.119 Sum_probs=127.0
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchH
Q 021547 80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-------LGAANILLPRPGWPFYE 149 (311)
Q Consensus 80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~ 149 (311)
++.|.| .+|..++...+.+|+.+..|.+ . --+..+|++.+-.+.+.++.. .++++|+++...|....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 445665 3567777777888887766654 1 223344455555544444432 22368999999997777
Q ss_pred HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226 (311)
Q Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay 226 (311)
..++..|++++.++.+ .++.+|+++|++.++ +++++|++++|+| +|...+ .+++|+++|+++|.++++|.++
T Consensus 593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq 667 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGAN 667 (939)
T ss_pred HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecC
Confidence 7889999999999864 456799999999987 4889999999998 787654 4999999999999999999999
Q ss_pred cCCccCCCCCCcccccCCCCCeEEEecCcccCCC----CcceeeEEEeeC
Q 021547 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV----PGWRFGWLATND 272 (311)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~----~G~r~G~i~~~~ 272 (311)
..-.. .......+ +-.|+++|.+|+|+. .|-.+|.+.+..
T Consensus 668 ~~al~---~l~~Pg~~---GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~ 711 (939)
T TIGR00461 668 MNAQV---GLTSPGDL---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKS 711 (939)
T ss_pred hhhCC---CCCCcccc---CCCEEEecCCccCCCCCCCCCCCeEEEEEhh
Confidence 64111 11111222 234899999997763 356789988853
No 334
>PRK06917 hypothetical protein; Provisional
Probab=99.29 E-value=5.1e-10 Score=104.95 Aligned_cols=250 Identities=16% Similarity=0.094 Sum_probs=149.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|.-... .--.+|.+.+++.+++..... .+.. .-..+.+..+++.+....+ ...+.+++++++++
T Consensus 28 ~dG~~ylD~~~g~~~~~-lGh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 102 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAG-IGHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSE 102 (447)
T ss_pred CCCCEEEECchhHHhcc-CCCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHH
Confidence 36889999987621111 123579999999999875322 1111 0112445556666655332 12357999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------
Q 021547 122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE-------- 171 (311)
Q Consensus 122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~-------- 171 (311)
|++.+++.... +|+.+|+.....|.+....+.. .+. .+..++...... +.
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 99999887632 4447899888888775433222 221 111111100000 00
Q ss_pred cCHHHHHhhcC----CCccEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 172 VDLEAVEALAD----ENTAAIVIINPCN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 172 ~d~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
-+++.+++.++ +++.++++..... ..|. ..+++.+++|.++|++||+++|.||++.++...|..+ ....++-.
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~-a~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh-hHHhcCCC
Confidence 02345566554 2344555554343 3445 5578889999999999999999999998764444322 22233333
Q ss_pred CCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547 246 VPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++ +++|.++ .|. ++|.+++.. ++++.+... .+.+++.++++.+++.+.|+
T Consensus 262 PDi~---~~gK~l~-~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 319 (447)
T PRK06917 262 PDIM---TLGKGLG-AGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLE 319 (447)
T ss_pred CCEE---Eeeehhc-cCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHH
Confidence 3444 7799964 575 899999853 366665421 23456789999888877764
No 335
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=7.2e-10 Score=104.38 Aligned_cols=253 Identities=13% Similarity=0.021 Sum_probs=152.6
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC---CCCCCEEEeC
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK---LSADDIYITL 117 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~---~~~~~v~~t~ 117 (311)
..+++.+|||..|--... .--.+|.+.+++.+++..-.. .....-..+.+..+++.+....+.. -..+.|++++
T Consensus 60 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~ 136 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNL-FGHAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYAD 136 (472)
T ss_pred eCCCCEEEEcCccHHhcc-CCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeC
Confidence 345889999987721111 123578899999998763211 1010111234556666665533211 1235899999
Q ss_pred ChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCC--Cccc---
Q 021547 118 GCMEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPER--GWEV--- 172 (311)
Q Consensus 118 g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~--- 172 (311)
+|++|++.+++.... +++.+|+.....|.+....+... +. .+..++..... .++.
T Consensus 137 sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 216 (472)
T PRK08742 137 NGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAE 216 (472)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHH
Confidence 999999998887642 33468998888887754333222 11 11222211000 0011
Q ss_pred -----CHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 173 -----DLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 173 -----d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+++.+++.+. .++.++++.. .....|. ..+++.++++.++|++||+++|.||++.++...|. ......+
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~-~~a~e~~ 295 (472)
T PRK08742 217 DYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT-LFACEQA 295 (472)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chHHHhc
Confidence 2455666553 3444555554 2566676 55778899999999999999999999998765554 2333344
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+-.++++ .++|.++ .| +++|.+++.+ ++++.+.. ..+.+++.++++.+++.+.|+
T Consensus 296 gv~PDiv---~~gKgl~-gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 358 (472)
T PRK08742 296 GVMPDLL---CLSKGLT-GGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLD 358 (472)
T ss_pred CCCCCEE---EEccccc-CCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHH
Confidence 4444556 5699964 47 4899998853 36665532 133467789999888877764
No 336
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=5.9e-10 Score=104.95 Aligned_cols=251 Identities=12% Similarity=0.003 Sum_probs=152.2
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|.-... .--.+|.+.+++.+++...... ....-..+.+..+++.+....+ ...+.++++++++
T Consensus 43 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 117 (466)
T PRK07030 43 DFEGKRYLDAVSSWWVNV-FGHANPRINQRIKDQVDQLEHV--ILAGFSHEPVIELSERLVKITP--PGLSRCFYADNGS 117 (466)
T ss_pred ECCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence 346889999977631111 1235788999999998743211 0001122445556666654322 1235899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCC--Cccc------
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPER--GWEV------ 172 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~------ 172 (311)
+|++.+++.... +|..+|+.....|.+....+.. .+. .+..+|..... ..+.
T Consensus 118 EAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~ 197 (466)
T PRK07030 118 SAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHS 197 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHH
Confidence 999998887632 3436788888888765432222 121 11222211100 0011
Q ss_pred --CHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 173 --DLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 173 --d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
+++.+++.+. ++..++++.. .+...|. ..+++.++++.++|++||+++|.||++.++...|. ......++-.
T Consensus 198 ~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~-~~a~~~~gv~ 276 (466)
T PRK07030 198 RRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT-MFACEQAGIR 276 (466)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc-chHHHhcCCC
Confidence 2455666664 3445555554 3555566 45667799999999999999999999988755553 2233344444
Q ss_pred CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++++ .++|.++ .| +++|.+++.+ ++++.+.. ..+.+++.++++.+++.+.|+
T Consensus 277 PDiv---~~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~ 337 (466)
T PRK07030 277 PDFL---CLSKALT-GGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD 337 (466)
T ss_pred CCEE---eeehhcc-CCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 4556 5699965 58 5999999853 46666532 233466789999888887764
No 337
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.28 E-value=3.1e-10 Score=105.69 Aligned_cols=250 Identities=16% Similarity=0.096 Sum_probs=149.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-... .--.+|.+.+++.+++......... .-..+.+..+++.+.+..+ ...+.++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE 114 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAI-HGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSV 114 (428)
T ss_pred CCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 36889999987621111 1134689999999998743211110 0122345556666655433 12368999999999
Q ss_pred HHHHHHHHHhc------CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC---Cc-ccCHHHH
Q 021547 122 AVEIILTVITR------LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER---GW-EVDLEAV 177 (311)
Q Consensus 122 a~~~~~~~l~~------~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~~~l 177 (311)
|++.+++.... .|+.+|+....+|.+....+... +. .+..++..... .+ .-|++.+
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l 194 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF 194 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence 99998887643 34478998888887643222211 11 11122211000 00 1245667
Q ss_pred HhhcC---CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547 178 EALAD---ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG 252 (311)
Q Consensus 178 ~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~ 252 (311)
++.++ ++..++++... ....|. ..+++.+++|.++|++||+++|+||++.++...|..+ ....++-.++++
T Consensus 195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PDi~--- 270 (428)
T PRK07986 195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPDIL--- 270 (428)
T ss_pred HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCCEE---
Confidence 77664 23444555542 555565 4466889999999999999999999997764444322 222333233334
Q ss_pred cCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547 253 SISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 253 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++|.++ .| +.+|.++++. ++++.+... .+.+++.+|++.+++.+.|+
T Consensus 271 t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~ 325 (428)
T PRK07986 271 CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLS 325 (428)
T ss_pred Eechhhh-CCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 5899975 56 5888887743 466666541 33456678888888777654
No 338
>PRK07036 hypothetical protein; Provisional
Probab=99.28 E-value=7.3e-10 Score=104.37 Aligned_cols=251 Identities=17% Similarity=0.129 Sum_probs=149.7
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.+|||..|.-... .--.+|.+.+++.+++..... ..+. ....+.+..+++.+....+ -..+.|++++++
T Consensus 47 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sG 121 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVN-VGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAP--GDLNHVFLTTGG 121 (466)
T ss_pred ECCCCEEEECcccHHhhc-CCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence 346889999987622111 123578999999998874211 1111 0123445556666655332 124689999999
Q ss_pred HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCC--CCcccC----
Q 021547 120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPE--RGWEVD---- 173 (311)
Q Consensus 120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~~d---- 173 (311)
++|++.+++.... +++.+|+.....|.+....+... +. .+..++.... ...+..
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 201 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF 201 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence 9999998887531 23368888888887654332221 11 1222221110 001111
Q ss_pred ----HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc-ccC
Q 021547 174 ----LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-VFG 243 (311)
Q Consensus 174 ----~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~-~~~ 243 (311)
.+.+++.+. ++..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|+.+ ... .++
T Consensus 202 ~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~g 280 (466)
T PRK07036 202 CDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFG 280 (466)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcC
Confidence 233444442 345555655556666774 567779999999999999999999998875444322 222 233
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
-.++++ +++|.++ .| +++|.+++.. ++++.+.. + .+.+++.+|++.+++.+.|+
T Consensus 281 v~PDiv---t~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le 343 (466)
T PRK07036 281 IQPDII---TFAKGLT-SGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE 343 (466)
T ss_pred CCCCEE---EEccccc-cCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH
Confidence 333444 7799964 57 5899999853 36666542 1 22366789999888887764
No 339
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.27 E-value=8e-11 Score=113.90 Aligned_cols=171 Identities=15% Similarity=0.091 Sum_probs=124.6
Q ss_pred CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547 82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160 (311)
Q Consensus 82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~ 160 (311)
+...+.|. .+..+..|+.++ .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+.+...|+.++
T Consensus 189 dLl~~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~G-d~VLvdRN~HKSv~haLilsga~PV 260 (714)
T PRK15400 189 SLLDHSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAG-STVLIDRNCHKSLTHLMMMSDVTPI 260 (714)
T ss_pred CCCCCChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeEE
Confidence 44444454 466667777663 23467889999999999999999999 9999999999999999999999999
Q ss_pred EeeccCCCCc----ccC-----HHHHHhhcCC--Ccc---EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547 161 HFDLLPERGW----EVD-----LEAVEALADE--NTA---AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226 (311)
Q Consensus 161 ~~~~~~~~~~----~~d-----~~~l~~~l~~--~~~---~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay 226 (311)
++.... +.+ .++ .+.+++.+.. +.+ ++++++|+ -.|.+++ ++.|+++|+.++ |++||||
T Consensus 261 Yl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 261 YFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccc
Confidence 987643 222 334 7888887754 233 68888885 4889998 788888888777 7999999
Q ss_pred cCC-ccCCC-C-CCcccccC-CCCCeEEEecCcccCCCCcceeeEEE
Q 021547 227 GHL-AFGST-P-YIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 227 ~~~-~~~~~-~-~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+.+ .|... + ..++.... +++.++++.|.+|. ++|+.-+.++
T Consensus 334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~L 378 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMI 378 (714)
T ss_pred hhhhccCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHH
Confidence 864 44321 1 22232221 12347999999998 5777766654
No 340
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.27 E-value=7.8e-10 Score=104.08 Aligned_cols=251 Identities=15% Similarity=0.111 Sum_probs=148.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEe-CCh
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYIT-LGC 119 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t-~g~ 119 (311)
.+++.++||..|--... .--.+|.+.+++.+++..... +....-..+.+..+++.+....+..... +.++++ ++|
T Consensus 60 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLA-LGHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG 136 (464)
T ss_pred CCCCEEEEccCCccccc-cCCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence 35888999976632211 123578999999998863211 1110111234444555554432212111 356564 788
Q ss_pred HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------cCHH
Q 021547 120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE--------VDLE 175 (311)
Q Consensus 120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------~d~~ 175 (311)
++|++.+++.... .|+.+|+.....|.+....+.. .+. ++..++...... +. .+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 9999998887643 4547888888888765432222 110 122232211100 00 1256
Q ss_pred HHHhhcCC------CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 176 AVEALADE------NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 176 ~l~~~l~~------~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
.+++.+.+ ++.++++.......|.+ .+++-++++.++|++||+++|.||+..++...|. ......++-.+++
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~-~~a~e~~gv~PDi 295 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK-MFAFEHAGIIPDV 295 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH-HHHHHhcCCCCCE
Confidence 67776642 24445554445555765 4688899999999999999999999998755553 2233334444455
Q ss_pred EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ .++|.++ .|+++|.+++.+. + +.+.. ....+++.++++.+++.+.|+
T Consensus 296 v---~~gKglg-gG~PlsAv~~~~~--------~-~~~~~~~~~~T~~gnpla~Aaa~a~L~ 344 (464)
T PRK06938 296 V---VLSKAIG-GSLPLAVVVYREW--------L-DTWQPGAHAGTFRGNQMAMAAGSATLR 344 (464)
T ss_pred E---Eeecccc-CCCceEEEeehhH--------h-hccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 6 5699975 5899999998531 2 33322 234567889999888887764
No 341
>PRK07483 hypothetical protein; Provisional
Probab=99.27 E-value=4.7e-10 Score=105.05 Aligned_cols=250 Identities=17% Similarity=0.131 Sum_probs=150.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.++||..|.-.. ..--.+|.+.+++.+++..... +.......+....+++.+....+. ..+.+++++++++
T Consensus 27 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~av~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsE 101 (443)
T PRK07483 27 ATGKRYLDASGGAAVS-CLGHSHPRVIAAIHAQIDRLAY--AHTSFFTTEPAEALADRLVAAAPA--GLEHVYFVSGGSE 101 (443)
T ss_pred CCCCEEEEcCccHhhh-ccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEcCCcHH
Confidence 4688999998772211 1123678899999999874321 111111124455566666553321 2368999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCc---ccC-----
Q 021547 122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGW---EVD----- 173 (311)
Q Consensus 122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~---~~d----- 173 (311)
|++.+++.... +++.+|+.....|.+....+.. .+. .+..++....... ..+
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence 99988886642 3446788888888765322221 111 1112221100000 000
Q ss_pred ---HHHHHhhcC----CCccEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 174 ---LEAVEALAD----ENTAAIVIINPCN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 174 ---~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
++.+++.+. ++..++++...+. ..|. ..+++.++++.++|++||+++|.||++.++...|. ......++-
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~gv 260 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT-LFACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH-HHHHhhcCC
Confidence 245565442 3445555554443 3454 55777899999999999999999999998755553 223333444
Q ss_pred CCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++ +++|.+ ..|. ++|.+++.+ ++.+.+... .+.+++.++++.+++.+.|+
T Consensus 261 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~ 319 (443)
T PRK07483 261 APDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQR 319 (443)
T ss_pred CCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 44555 669996 4575 999999854 366665421 33467789999888877764
No 342
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.27 E-value=6.9e-10 Score=98.33 Aligned_cols=248 Identities=16% Similarity=0.094 Sum_probs=164.3
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHH
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVA 97 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia 97 (311)
-+..|++++..-..+ .+..|+|=--. --.++.+++++...+.+ +.-..|+...-++++++...
T Consensus 10 ~d~~i~~~i~~e~~r-----q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~lai 78 (413)
T COG0112 10 YDPEIFEAIQQELER-----QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAI 78 (413)
T ss_pred cCHHHHHHHHHHHHH-----Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHH
Confidence 345677777643333 34556664443 23578888988777642 11223555666677777777
Q ss_pred HHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---HHHcC--cEEEEeeccCCCCccc
Q 021547 98 EYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---AKRNH--IEVRHFDLLPERGWEV 172 (311)
Q Consensus 98 ~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---~~~~g--~~~~~~~~~~~~~~~~ 172 (311)
+..++.||.+ .-||...+| +.|..+++.+|++|| |+|+..+-.+.++... ....| ++.+.+++++ ++..+
T Consensus 79 erak~LFga~--~anVQPhSG-s~AN~av~~All~pG-Dtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~I 153 (413)
T COG0112 79 ERAKKLFGAE--YANVQPHSG-SQANQAVYLALLQPG-DTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLI 153 (413)
T ss_pred HHHHHHhCCC--ccccCCCCc-hHHHHHHHHHHcCCC-CeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCcc
Confidence 7777777643 346666666 568999999999999 9999876665543221 11222 4666676644 45689
Q ss_pred CHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEE
Q 021547 173 DLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 173 d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
|.|++++... .++|+|+.-...+|- .++ ++++.++|.+-|.++++|.+|- ++.-.|.-+.|+..- .|+
T Consensus 154 DyD~~~k~a~e~kPK~ii~G~SaY~r--~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~A-----dvV 223 (413)
T COG0112 154 DYDEVEKLAKEVKPKLIIAGGSAYSR--PID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHA-----DVV 223 (413)
T ss_pred CHHHHHHHHHHhCCCEEEECcccccc--ccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCcc-----ceE
Confidence 9999999654 578887766555544 334 8999999999999999999996 466666545555442 299
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMF 306 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 306 (311)
.+|.+|+ ++|-|-|.|++.+. ++.+++........-.+++.-.+++.
T Consensus 224 TtTTHKT--lrGPrGG~Il~~~e-------el~kkin~aVFPg~qggpl~HviAak 270 (413)
T COG0112 224 TTTTHKT--LRGPRGGIILTNDE-------ELAKKINSAVFPGLQGGPLMHVIAAK 270 (413)
T ss_pred eCCcccC--CCCCCceEEEeccH-------HHHHHhhhhcCCccCCChHHHHHHHH
Confidence 9999998 57888898887652 36777766544333444444444433
No 343
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.27 E-value=5e-10 Score=112.69 Aligned_cols=170 Identities=20% Similarity=0.171 Sum_probs=118.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHHHHHHHHh----cCC---CCEEEecCCCCcchHHHHHHcCcE
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVEIILTVIT----RLG---AANILLPRPGWPFYESFAKRNHIE 158 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~~~~~~l~----~~g---~d~Vl~~~p~~~~~~~~~~~~g~~ 158 (311)
+|..++...+.+|+.+..|. +++.+.. |++++..+.+.++. ++| .++|+++...|......+...|++
T Consensus 538 qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~ 613 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK 613 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence 45667777777888876664 3565554 55555544443333 445 136999999998888888999999
Q ss_pred EEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547 159 VRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 159 ~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~ 235 (311)
++.++.+ .++.+|+++|++.+++ ++.++++++|++-.+...+ +++|+++|+++|+++++|.++......
T Consensus 614 vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~--- 685 (954)
T PRK05367 614 VVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG--- 685 (954)
T ss_pred EEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC---
Confidence 9999875 3457999999998865 4667778888765444456 999999999999999999999642211
Q ss_pred CCcccccCCCCCeEEEecCcccCCCC----cceeeEEEee
Q 021547 236 YIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATN 271 (311)
Q Consensus 236 ~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~ 271 (311)
......+ +-.++..|++|+|+.| |-.+|.+.+.
T Consensus 686 l~~pg~~---GADi~~~s~HK~f~~P~G~GGPg~G~l~vr 722 (954)
T PRK05367 686 LARPGDI---GADVSHLNLHKTFCIPHGGGGPGVGPIGVK 722 (954)
T ss_pred CCChhhc---CCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence 1111122 2238889999997643 4557887764
No 344
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.27 E-value=4.5e-10 Score=104.82 Aligned_cols=246 Identities=16% Similarity=0.122 Sum_probs=143.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
++++++||..|.-....+ -.+|.+.+++.+++...... .+... +....+++.+.+..+ -.-+.++++++|+
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~--~~~~~v~f~~sGs 115 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTH----KPAIELCQKLVKMTP--NALDCVFLADSGS 115 (427)
T ss_pred CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCC----HHHHHHHHHHHhhCC--CCCCEEEEeCCcH
Confidence 588999998763221112 46789999999988743211 11111 223334444443322 1236899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCcE-------------EEEeeccCCCCcc-----cCH
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHIE-------------VRHFDLLPERGWE-----VDL 174 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~~-----~d~ 174 (311)
+|++.+++.... +|..+||....+|.+....+.. .+.. ...++. +...+. -++
T Consensus 116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~ 194 (427)
T TIGR00508 116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI 194 (427)
T ss_pred HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence 999988876542 2446899888888764322222 1211 011111 101110 135
Q ss_pred HHHHhhcC---CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 175 EAVEALAD---ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 175 ~~l~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
+++++.+. .+..++++... +...|. ..+.+.+++|.++|++||+++|+||++.++...|..+ ....++-.++++
T Consensus 195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~-~~~~~~v~pDi~ 273 (427)
T TIGR00508 195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF-ACEHAGVVPDIL 273 (427)
T ss_pred HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc-hhhhcCCCCCEE
Confidence 56666653 23444454443 555565 4578899999999999999999999997765555432 222232233333
Q ss_pred EEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.+ ..|+ .++.++... ++++.+... ...++..++++.+++.+.|+
T Consensus 274 ---~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 328 (427)
T TIGR00508 274 ---CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA 328 (427)
T ss_pred ---Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 379997 4574 677777642 366666531 22345568888888777664
No 345
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.25 E-value=4.8e-10 Score=104.52 Aligned_cols=251 Identities=16% Similarity=0.119 Sum_probs=146.0
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+++.++||..|--... .--.+|.+.+++.+++........ ..-..+.+..+++.+....+ ...+.++++++++
T Consensus 40 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 114 (429)
T PRK06173 40 LKDGRRLIDGMSSWWAAL-HGYNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILP--PSLNKIFFADSGS 114 (429)
T ss_pred cCCCCEEEEccchHHhcc-CCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCch
Confidence 346889999976621111 113568999999998874321111 00112333445555544322 1346899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-C----c---------EEEEeeccCCC---Cc-ccCHH
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-H----I---------EVRHFDLLPER---GW-EVDLE 175 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g----~---------~~~~~~~~~~~---~~-~~d~~ 175 (311)
+|++.+++.... +|+.+|+.....|.+....+... + . ....++..... .+ .-+++
T Consensus 115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 194 (429)
T PRK06173 115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence 999998887642 34468888888887742211111 1 0 01122211000 00 01355
Q ss_pred HHHhhcC---CCccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 176 AVEALAD---ENTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 176 ~l~~~l~---~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
.+++.+. ++..++++... +...|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++-.++++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDiv- 272 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPDIM- 272 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCCEE-
Confidence 5666664 34555555553 6666775 677889999999999999999999997764445322 122233233333
Q ss_pred EecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-----h-hccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-----C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .| +.++.+++.. ++++.+.. + .+.++..++++.+++.+.|+
T Consensus 273 --~~gK~l~-gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 327 (429)
T PRK06173 273 --CIGKALT-GGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR 327 (429)
T ss_pred --Eeehhhh-CCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 4899974 56 4788887743 35665532 1 23345678888887776654
No 346
>PRK06148 hypothetical protein; Provisional
Probab=99.25 E-value=5.9e-10 Score=113.86 Aligned_cols=245 Identities=16% Similarity=0.080 Sum_probs=149.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+++.++||..|... .--.+|.+.+++.+++.....+ .| ..+.+..+++.+.+..+. ..+.++++++|++
T Consensus 622 dG~~ylD~~~g~~~---lGH~hp~v~~Ai~~q~~~l~~~~~~-----~~~~~~~lAe~L~~~~p~--~~~~v~f~nSGsE 691 (1013)
T PRK06148 622 RGRAYLDCFNNVCH---VGHAHPRVVAAAARQAARLNTNTRY-----LHDAIVAYAERLTATLPD--GLTVAFFVNSGSE 691 (1013)
T ss_pred CCCEEEEcccChhh---cCCCCHHHHHHHHHHHhhcCCcCCc-----CCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHH
Confidence 48888999776311 1236899999999998743111 22 223455566666554321 2367999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccC--CCCccc-C-------HHHH
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLP--ERGWEV-D-------LEAV 177 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~--~~~~~~-d-------~~~l 177 (311)
|++.+++.... .|+.+|+....+|.+....+.. .+. .+..++... ...+.. + .+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 99998887753 4546888888888765322111 110 111111100 001110 1 1234
Q ss_pred HhhcC------CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 178 EALAD------ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 178 ~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
++.+. .++.++++.......|. ..+++.++++.++|++||+++|.||++.++...|.....+..++-.++++
T Consensus 772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv- 850 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV- 850 (1013)
T ss_pred HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee-
Confidence 44332 23445555544444455 55777899999999999999999999988755554333344444344444
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--hccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .|.++|.+++.. ++++.+... ...+++.++++.+++.+.|+
T Consensus 851 --t~gK~lg-gG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~ 900 (1013)
T PRK06148 851 --TMGKPIG-NGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLD 900 (1013)
T ss_pred --eeccccc-CCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence 7799965 589999999853 466665432 23467889999888887664
No 347
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.25 E-value=3e-10 Score=103.18 Aligned_cols=186 Identities=12% Similarity=-0.010 Sum_probs=125.7
Q ss_pred CcHHHHHHHHHHHhcC---CCCCCCCCC---CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC-hHHHHHHHHHHHhcCCC
Q 021547 63 TAAVAEDAIVDSVRSS---MFNCYAPMF---GLPLARRAVAEYLNRDLPYKLSADDIYITLG-CMEAVEIILTVITRLGA 135 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~---~~~~Y~~~~---g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g-~~~a~~~~~~~l~~~g~ 135 (311)
.|..+++++.+.+... ....|.... ...++-+.+.+.+++.++.+ ...+|++++| +|.++++++..+..+|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~- 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEG- 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCC-
Confidence 4678888888887631 111222211 12245455555555555531 2346877766 9999999999999899
Q ss_pred CEEEecCCCCcc--hHHHHHHcCcEEEEeeccCC--CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547 136 ANILLPRPGWPF--YESFAKRNHIEVRHFDLLPE--RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 136 d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 211 (311)
+++++...+..+ +...++..|. +..+...+. .+..+++++++ ++++++.|.+++..+.||...+ +
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~ 149 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------E 149 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------e
Confidence 998887766654 4578888998 776664322 12234555555 3468899999999999999775 5
Q ss_pred HHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 212 l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++.+++++++|.+.+. |..+..+..++ +++.|..|.+|.|| +|.++++.
T Consensus 150 l~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~ 199 (349)
T TIGR01364 150 LPDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRK 199 (349)
T ss_pred ecccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECH
Confidence 66678999999999986 22333444332 99999999998777 67766654
No 348
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.24 E-value=2.3e-10 Score=106.77 Aligned_cols=188 Identities=15% Similarity=0.071 Sum_probs=136.2
Q ss_pred HHHHHHHHHHhcC-------CCCCCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547 66 VAEDAIVDSVRSS-------MFNCYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN 137 (311)
Q Consensus 66 ~~~~a~~~~~~~~-------~~~~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~ 137 (311)
.+.+.+.+.+.+. .+.+-.++.|. .+..+..|+.++. ....++++|++.++..++.+++.+| |.
T Consensus 41 ~f~~f~Gen~fr~D~~~~~~~Ld~Ll~p~G~i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~G-D~ 112 (557)
T COG1982 41 EFYDFFGENLFRADVSEADGELDSLLDPEGPIKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPG-DK 112 (557)
T ss_pred HHHHHhhhhhhhcccccccCccccccCCCccHHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCC-CE
Confidence 5556665554321 12233344444 5667777777732 3368899999999999999999999 99
Q ss_pred EEecCCCCcchHHHHHHcCcEEEEeeccCCCC----cccCHHHHHhhcCC--Cc-cEEEEeCCCCCCccCCCHHHHHHHH
Q 021547 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERG----WEVDLEAVEALADE--NT-AAIVIINPCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~d~~~l~~~l~~--~~-~~i~i~~p~nptG~~~~~~~l~~l~ 210 (311)
||+++++|.+..+.+...|+.++++....... .+++.+.+++.+.+ .. +++++++|++ .|..++ ++++.
T Consensus 113 VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~ 188 (557)
T COG1982 113 VLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIV 188 (557)
T ss_pred EEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHH
Confidence 99999999999999999999999987654442 46789999886543 34 7788888765 788888 89999
Q ss_pred HHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
++++++++|+.+|+++....-.. +..+-.. ...+.++.+.|.+|. ++++..+.++
T Consensus 189 ~~~~~~~a~v~~deah~~~~~~~-~~l~~~~-~~~~~~~~tqS~HK~--l~alSQaS~i 243 (557)
T COG1982 189 ELLHHYGAWVLYDEAHPAHFDFS-PMLPESA-LNGGADFVTQSTHKL--LAALSQASMI 243 (557)
T ss_pred HHHhhcCceEEhhhcCccccccc-ccCcchh-hhcCceEEEechhhh--hhhhhhhHHH
Confidence 99999999999999998643111 1111111 124568999999998 4556555544
No 349
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.23 E-value=2.1e-10 Score=104.44 Aligned_cols=240 Identities=17% Similarity=0.109 Sum_probs=138.9
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHH
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAE 98 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~ 98 (311)
..+|.++++.-.++ .+.-|+|--.. -..+|.+++++...+..-... .|....-+.++++...+
T Consensus 5 d~ei~~li~~e~~r-----q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ 73 (399)
T PF00464_consen 5 DPEIYELIEKEEER-----QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIE 73 (399)
T ss_dssp THHHHHHHHHHHHH-----HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHH
Confidence 45566666543333 35667776654 235677777776655421111 13333344555555555
Q ss_pred HHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHH-------HHcCcEEEEeecc
Q 021547 99 YLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFA-------KRNHIEVRHFDLL 165 (311)
Q Consensus 99 ~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~-------~~~g~~~~~~~~~ 165 (311)
..++.|+. ++++..+ ..+++.|+.+++.+|++|| |+|+..+..+.+.. ... .-...+.+.++++
T Consensus 74 ra~~lF~~--~~~~w~anvqp~SGs~An~av~~aLl~pG-D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d 150 (399)
T PF00464_consen 74 RAKELFGA--EPKEWYANVQPHSGSQANLAVYMALLKPG-DTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD 150 (399)
T ss_dssp HHHHHHT---STTTEEEE---SSHHHHHHHHHHHHT-TT--EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-
T ss_pred HHHHHhCC--CcccceEEeecCCchHHHHHHHHHHHhhc-CcEEecChhhcccccccccccccccccccceEEEEeeeee
Confidence 55555553 3333333 4677889999999999999 99998776654332 111 2234577788775
Q ss_pred CCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccC
Q 021547 166 PERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFG 243 (311)
Q Consensus 166 ~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~ 243 (311)
+ ++..+|.+++++.... ++++|++....+|- .+ +++++.++|++.|.+|++|.+|- ++.-.|.-+.|+..-
T Consensus 151 ~-~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~--~~---d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~A- 223 (399)
T PF00464_consen 151 P-DTGLIDYDELEKLAKEHKPKLIICGASSYPR--PI---DFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYA- 223 (399)
T ss_dssp T-TTSSB-HHHHHHHHHHH--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTS-
T ss_pred c-CCCeECHHHHHHHHhhcCCCEEEECchhccC--cc---CHHHHHHHHHhcCcEEEecccccccceehheecCccccc-
Confidence 4 4678999999997654 78888877666554 22 48999999999999999999996 466566555565432
Q ss_pred CCCCeEEEecCcccCCCCcceeeEEEee------CCCCccchhhHHHHHhhhhc
Q 021547 244 SIVPVITLGSISKRWIVPGWRFGWLATN------DPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~------~~~~~~~~~~~~~~~~~~~~ 291 (311)
.|+.+|.+|+ ++|-|-|.|++. +......++++.+++.....
T Consensus 224 ----Dvvt~sThKt--l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avf 271 (399)
T PF00464_consen 224 ----DVVTGSTHKT--LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVF 271 (399)
T ss_dssp ----SEEEEESSGG--G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHT
T ss_pred ----eEEEeecccc--ccccCceEEEEcCCccccCCcccccHHHHHHHhccccC
Confidence 1999999998 588888998886 11100002457777776644
No 350
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.22 E-value=4.9e-10 Score=102.24 Aligned_cols=189 Identities=10% Similarity=-0.005 Sum_probs=122.7
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCC---CCCCcHHHHHHHHHHHhhcCCCCCCCCCEE-EeCChHHHHHHHHHHHhcC
Q 021547 61 FRTAAVAEDAIVDSVRSS---MFNCYA---PMFGLPLARRAVAEYLNRDLPYKLSADDIY-ITLGCMEAVEIILTVITRL 133 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~---~~~~Y~---~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~-~t~g~~~a~~~~~~~l~~~ 133 (311)
...|+.++++|...+... ....+. ......++-+.+.+.+++.++.+ +..+++ ++++++.++++++..++.+
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~ 90 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGG 90 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCC
Confidence 467899999999876311 000111 11122244444444444444421 223454 4577799999999999999
Q ss_pred CCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547 134 GAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 134 g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~ 210 (311)
| +++++...+..+ +...++..|.. ..+......+ ..+..++++ .+++++++|.+++..+.||...+ ++.++
T Consensus 91 g-~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i- 164 (360)
T PRK05355 91 G-KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT- 164 (360)
T ss_pred C-CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc-
Confidence 9 988877666654 35688888865 5554332123 234444444 77778999999999999999984 25555
Q ss_pred HHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+|+++++|.+.+. |..+..+..++ +++.|..|.+|.+| +|.+++++
T Consensus 165 -----~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~ 210 (360)
T PRK05355 165 -----GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVRE 210 (360)
T ss_pred -----CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECH
Confidence 7999999999986 22334444332 89999999998666 67766654
No 351
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.21 E-value=6.6e-10 Score=101.34 Aligned_cols=206 Identities=19% Similarity=0.140 Sum_probs=137.7
Q ss_pred CCCeeecCCCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+-+|||-+-. .. .+.+.+.++|.. . + ..|..++.+..|++.+++++ ..+.++.|+.++.+
T Consensus 40 ~dV~IDLrSDT-----gT~apS~~m~aAM~~---G-D-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRga 101 (467)
T TIGR02617 40 EDVFIDLLTDS-----GTGAVTQSMQAAMMR---G-D-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGA 101 (467)
T ss_pred CCeEEECccCC-----CCCCCCHHHHHHHHc---C-C-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchH
Confidence 45667877654 23 356777777764 2 2 26988889999999999999 44568889888999
Q ss_pred HHHHHHHHhc-CCCCEEEecCC-------CCc-chHHHHHHcCcEEEEeecc--------CCCCcccCHHHHHhhcCC--
Q 021547 123 VEIILTVITR-LGAANILLPRP-------GWP-FYESFAKRNHIEVRHFDLL--------PERGWEVDLEAVEALADE-- 183 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p-------~~~-~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~-- 183 (311)
-.+++..+++ +| +.+++..+ .|. .....+...|..+..++.. ...++.+|++.+++.+++
T Consensus 102 E~Il~~~~~~~~g-~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g 180 (467)
T TIGR02617 102 EQIYIPVLIKKRE-QEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_pred HHHHHHhhccccc-ccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC
Confidence 9999999998 67 77775443 222 2345778889887776432 123467899999999874
Q ss_pred --CccEEEEeCCCC-CCccCCCHHHHHHHHHHHHHhCCEEEEeccccC--C--------ccCCCCCCccc-ccCCCCCeE
Q 021547 184 --NTAAIVIINPCN-PCGNVLTYQHLQKIAETARKLGILVIADEVYGH--L--------AFGSTPYIPMG-VFGSIVPVI 249 (311)
Q Consensus 184 --~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i 249 (311)
+...+...-.+| -.|+.+|.+.++++.++|++||+.++.|.+--. . .+.+.+...+. .+-..-+ .
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD-s 259 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD-M 259 (467)
T ss_pred CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC-E
Confidence 222222222233 468899999999999999999999999986532 1 13333322221 0001111 5
Q ss_pred EEecCcccCCCC-cceeeEEEeeC
Q 021547 250 TLGSISKRWIVP-GWRFGWLATND 272 (311)
Q Consensus 250 ~i~s~sK~~~~~-G~r~G~i~~~~ 272 (311)
+..|+||.+++| | |++++++
T Consensus 260 vt~slsKglgApvG---g~Lag~d 280 (467)
T TIGR02617 260 LAMSAKKDAMVPMG---GLLCFKD 280 (467)
T ss_pred EEEEcCCCCCCccc---ceEEecc
Confidence 566999998776 4 5555544
No 352
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.21 E-value=2.7e-09 Score=100.31 Aligned_cols=251 Identities=18% Similarity=0.088 Sum_probs=147.5
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCM 120 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~ 120 (311)
.+++.+|||..|--... .--.+|.+.+++++++......... .-..+.+..+++.+....+.... ...++++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLA-LGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 35889999987732211 1236788999999988642211111 11234556667777654331111 12346668999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C------------cEEEEeeccCCCC--cc----cCHHH----
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H------------IEVRHFDLLPERG--WE----VDLEA---- 176 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~----~d~~~---- 176 (311)
+|++.+++.... .|+.+|+.....|.+....+... + ..+..++...... +. -+.+.
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 999988887643 45478998888888765443321 1 1122222211000 00 01122
Q ss_pred HHhhcC------CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547 177 VEALAD------ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI 249 (311)
Q Consensus 177 l~~~l~------~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i 249 (311)
+++.+. ++..++++.......|.. .+++-++++.++|++||+++|.||+..++...|. ......++-.++++
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~-~~a~~~~gv~PDiv 290 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK-MFAFEHAGIEPDII 290 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch-HHHhhhcCCCCCEE
Confidence 233222 134455555445555664 5677899999999999999999999998755553 22333344444555
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.++ .|+++|.+++.. .++.+.. ....+++.++++.+++.+.|+
T Consensus 291 ---t~gK~l~-gG~Pi~av~~~~---------~~~~~~~~~~~~T~~gnpla~aaala~L~ 338 (459)
T PRK06931 291 ---VMSKAVG-GGLPLAVLGIKK---------EFDAWQPGGHTGTFRGNQLAMATGLTTLK 338 (459)
T ss_pred ---Eeccccc-CCcceeeeeeHH---------HHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 6699965 579999877642 1233322 234567889999888877764
No 353
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.15 E-value=1.8e-09 Score=100.89 Aligned_cols=235 Identities=16% Similarity=0.155 Sum_probs=133.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|--... .--.+|.+.+++.+++.... .+... ...+-.+++.+.+..+ ..+.++++++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~--~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGse 115 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVG-LGHAYPPVVEAVREALQDGC--NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSD 115 (431)
T ss_pred CCCCEEEEccccccchh-cCCCCHHHHHHHHHHHHhCc--CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHH
Confidence 35888999987632111 12357899999999987543 23221 2222334444443222 1368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEec-CCCCcchHHHHH-----HcCc------EEEEeeccCCCCcccCHHHHHhhcCC--Ccc
Q 021547 122 AVEIILTVITR-LGAANILLP-RPGWPFYESFAK-----RNHI------EVRHFDLLPERGWEVDLEAVEALADE--NTA 186 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~-~p~~~~~~~~~~-----~~g~------~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~ 186 (311)
|++.+++.... .|+.+|+.. ...|.++..... ..+. ....++ .-|++.+++.+.. +..
T Consensus 116 A~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~ 188 (431)
T PRK06209 116 ATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDHPGRI 188 (431)
T ss_pred HHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhCCCCE
Confidence 99998886643 343456554 233322110000 0010 011111 1267888887742 233
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 266 (311)
+.++.-|- .|...+.+.+++|.++|++||+++|+||++.++...+.. ....+.-.++ +.+++|.++ .|+.+|
T Consensus 189 aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g--~~~~~gv~PD---i~t~gK~lg-gG~p~~ 260 (431)
T PRK06209 189 ACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG--AQKLYGIVPD---LSCFGKALG-NGFAVS 260 (431)
T ss_pred EEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcch--hhHHhCCCcc---eeeehhhhc-CCcccE
Confidence 44444442 234677888999999999999999999999776432111 1111222222 357899976 478899
Q ss_pred EEEeeCCCCccchhhHHHH--Hh------hh-hccccCCCchhHHHHHhhh
Q 021547 267 WLATNDPNGVLQKSGIVGS--IK------AC-LGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~--~~------~~-~~~~~~~~~~~q~~~~~~l 308 (311)
+++++. ++++. +. .+ .+.+.++++++.+++.+.|
T Consensus 261 av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l 303 (431)
T PRK06209 261 ALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATM 303 (431)
T ss_pred EEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHH
Confidence 999853 35554 21 11 2334556677766666554
No 354
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.15 E-value=1.4e-09 Score=99.56 Aligned_cols=228 Identities=20% Similarity=0.147 Sum_probs=140.6
Q ss_pred cHHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-------cC
Q 021547 64 AAVAEDAIVDSVRSSMFN---CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-------RL 133 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-------~~ 133 (311)
.+.+.+++.++++.-.+. .....+ ..+|-+.+++.. +- -.-++|++++||++|++.+++... ++
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a----P~-~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA----PE-GGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC----CC-CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 578889999988742211 111111 345555555555 20 125789999999999999887763 24
Q ss_pred CCCEEEecCCCCcchHHHH--------------HHcCcEEEEeeccCC------CCcc----cCHHHHHhhcCC---Ccc
Q 021547 134 GAANILLPRPGWPFYESFA--------------KRNHIEVRHFDLLPE------RGWE----VDLEAVEALADE---NTA 186 (311)
Q Consensus 134 g~d~Vl~~~p~~~~~~~~~--------------~~~g~~~~~~~~~~~------~~~~----~d~~~l~~~l~~---~~~ 186 (311)
.+.+++.-...|.+-...+ ...-.....++.... ..+. -..++|++.+.. ++.
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~I 215 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETI 215 (449)
T ss_pred cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccE
Confidence 3345777778886421111 111112223332210 1111 235566776543 556
Q ss_pred EEEEeCC-C-CCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 187 AIVIINP-C-NPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 187 ~i~i~~p-~-nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+.+|.-| . .-.|..++++. ++++.++|++||+++|.||+-.+|...|+.+.. ....-.++++ +++|.+...=+
T Consensus 216 AAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~gi~PDi~---~~aKGLT~GY~ 291 (449)
T COG0161 216 AAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAGIVPDIL---CLAKGLTGGYL 291 (449)
T ss_pred EEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcCCCCCee---eecccccccch
Confidence 6666666 3 44787665554 999999999999999999999998777754433 3333344455 78998655557
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~ 309 (311)
++|.+++.+ ++.+.+..- .+.++..+|++.+++.+-|+
T Consensus 292 Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~ 335 (449)
T COG0161 292 PLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD 335 (449)
T ss_pred hhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH
Confidence 777777754 466665542 34568889999888877653
No 355
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.14 E-value=8.3e-09 Score=99.14 Aligned_cols=161 Identities=15% Similarity=0.064 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc---------C--
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR---------L-- 133 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~---------~-- 133 (311)
+.+...+...+-+.....|..+++...+++.+.+++.+.+|.+- ..=.+|+|||.|+..++..... .
T Consensus 97 paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~ 174 (608)
T TIGR03811 97 PAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVK 174 (608)
T ss_pred HHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhcc
Confidence 34433333333333333566667888999999999999988753 3345788998887765544321 0
Q ss_pred -----------------------------------------CC-----CEEEecCCCCcchHHHHHHcCcE---EEEeec
Q 021547 134 -----------------------------------------GA-----ANILLPRPGWPFYESFAKRNHIE---VRHFDL 164 (311)
Q Consensus 134 -----------------------------------------g~-----d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~ 164 (311)
|. -+++++...|.++...+..+|+. ++.+|+
T Consensus 175 ~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv 254 (608)
T TIGR03811 175 PELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPV 254 (608)
T ss_pred ccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeec
Confidence 00 05888888899999999999995 788876
Q ss_pred cCCCCcccCHHHHHhhcCC----C-cc-EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC--EEEEeccccCC
Q 021547 165 LPERGWEVDLEAVEALADE----N-TA-AIVIINPCNPCGNVLTYQHLQKIAETARKLGI--LVIADEVYGHL 229 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~~----~-~~-~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~--~li~D~ay~~~ 229 (311)
+ +++.+|++.|++.+.+ + +. +|+.+..+..+|.+-+.+++.+|++.++++|+ |+++|.+|+++
T Consensus 255 D--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 255 D--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred C--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 4 5678999999987753 2 33 34445567899999994444444444478898 69999999985
No 356
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.12 E-value=4.8e-09 Score=103.83 Aligned_cols=175 Identities=17% Similarity=0.156 Sum_probs=123.0
Q ss_pred CCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchH
Q 021547 81 NCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVEIILTVITR-------LGAANILLPRPGWPFYE 149 (311)
Q Consensus 81 ~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~ 149 (311)
+.|.| .+|..++...+.+++.+..|.+. +-+-. +++.+..+.+.++.. +++++||++.-.|....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 57777 88988888888888887665433 34433 445555566666542 34478999998886555
Q ss_pred HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226 (311)
Q Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay 226 (311)
..+...|++++.++.+ .++.+|+++|++.++ +++.++.+++|++-.+.. +++++|+++|+++|.++++|.++
T Consensus 606 asa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 6688899999999875 345799999999886 577777778877655443 45999999999999999999999
Q ss_pred cCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEe
Q 021547 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLAT 270 (311)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~ 270 (311)
..-.. .......+. -.|+.++++|+|+.| |.-+|.+.+
T Consensus 681 ~~a~~---~l~~Pg~~G---ADi~~~s~HKtf~~P~G~GGP~vG~iav 722 (954)
T PRK12566 681 LNAQV---GLARPADIG---ADVSHMNLHKTFCIPHGGGGPGMGPIGV 722 (954)
T ss_pred hhhcc---CCCChhhcC---CCEEEecCCcccCcCccCCCCccchhhh
Confidence 64111 111112232 349999999998744 455666444
No 357
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.11 E-value=2.5e-09 Score=91.70 Aligned_cols=150 Identities=20% Similarity=0.222 Sum_probs=112.3
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-Cc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NT 185 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~ 185 (311)
++.-+++..+++.++++++..++.|| |+|++.. ..|.. ..+.+++.|+++..++.+ -+....++++++.+.+ ++
T Consensus 67 n~~tf~isgsGh~g~E~al~N~lePg-d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p 143 (385)
T KOG2862|consen 67 NAQTFVISGSGHSGWEAALVNLLEPG-DNVLVVSTGTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKP 143 (385)
T ss_pred CCceEEEecCCcchHHHHHHhhcCCC-CeEEEEEechHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCC
Confidence 34566777778999999999999999 9998764 44442 457999999999999654 4556899999887754 78
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-cce
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWR 264 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r 264 (311)
+++++++....||+..+ -+..+.++|++|+.+++||.+-+- ++.++ . +|+.+..+...+.-|++++| |+-
T Consensus 144 ~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSl---ggt~F-~---mDewgVDvaytgSQKaL~aP~GLs 214 (385)
T KOG2862|consen 144 KAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASL---GGTEF-E---MDEWGVDVAYTGSQKALGAPAGLS 214 (385)
T ss_pred ceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhc---CCccc-e---ehhhcccEEEecchhhcCCCCCcc
Confidence 89999999999999876 456677889999999999999874 22222 2 23333446777888998886 443
Q ss_pred eeEEEeeC
Q 021547 265 FGWLATND 272 (311)
Q Consensus 265 ~G~i~~~~ 272 (311)
+ |.+++
T Consensus 215 i--isfS~ 220 (385)
T KOG2862|consen 215 I--ISFSD 220 (385)
T ss_pred e--eecCH
Confidence 3 54443
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=4.3e-09 Score=92.89 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=144.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM------FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++.+++||+..+. ..+.-.+.+.+.....++.-. -.-|..-.-+..+.+.+++++. .++-++-
T Consensus 92 ~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVY 160 (467)
T ss_pred cCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeee
Confidence 4788999998884 456677888888777776311 1126655556778999999993 3445555
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc-----------
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT----------- 185 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~----------- 185 (311)
+-+-+++..++.++++.| |.|.+..-...+....++...-.+..... .|+++++..+.+.+
T Consensus 161 s~gF~ti~S~ipafsKrG-DIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~ 232 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRG-DIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKAL 232 (467)
T ss_pred ccccchhhhcchhhhccC-cEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhcccccc
Confidence 555778999999999999 99999888888888777877777777654 26777776554322
Q ss_pred -cEEEEe-CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 186 -AAIVII-NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 186 -~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
+-.+++ .-.-++|.+.+ +.+|+++..+|...||.||.|+.-..+ |.........+..+-.++++|+.-+++..
T Consensus 233 ~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~ 309 (467)
T KOG1358|consen 233 TRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG 309 (467)
T ss_pred ceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc
Confidence 333333 34568999999 999999999999999999999865543 33322222222233458899999987777
Q ss_pred cceeeEEEee
Q 021547 262 GWRFGWLATN 271 (311)
Q Consensus 262 G~r~G~i~~~ 271 (311)
| |++++.
T Consensus 310 G---gFc~G~ 316 (467)
T KOG1358|consen 310 G---GFCAGK 316 (467)
T ss_pred C---ceeecc
Confidence 7 887763
No 359
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=1.5e-08 Score=90.17 Aligned_cols=248 Identities=15% Similarity=0.121 Sum_probs=155.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-C-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-M-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+..+|||..+--...+ -...|++.+++.+.+... + .+.|-.-+ .-++.+.+.+.+.+ + ..+.|++++++
T Consensus 53 ~~g~EyiD~~ssw~~~~~-Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~----~-~~~rvff~nsG 125 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTIL-GHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK----G-SAERVFFCNSG 125 (433)
T ss_pred CCcceeeeeccceecccc-CCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC----C-CccEEEEecCC
Confidence 368899999877211111 234899999999887643 1 11222211 33444444444432 2 77899999999
Q ss_pred HHHHHHHHHHHhcC---C--CC--EEEecCCCCcchH-HHHHHcCcEEEEeecc---CCC--CcccCHHHHHhhcCCCc-
Q 021547 120 MEAVEIILTVITRL---G--AA--NILLPRPGWPFYE-SFAKRNHIEVRHFDLL---PER--GWEVDLEAVEALADENT- 185 (311)
Q Consensus 120 ~~a~~~~~~~l~~~---g--~d--~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~---~~~--~~~~d~~~l~~~l~~~~- 185 (311)
|+|++.++..-.+. + -+ +++....+|.+-. .++...+......+.+ ++- .-.-|...+++.++.+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 99999888776431 1 01 4887777776532 2222222221112111 110 01126788888876543
Q ss_pred --cEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 186 --AAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 186 --~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
.++++...+...|.. .++|.+..|.++|+++|+++|.||+.-+|...|... ....+.-.+++ .++.|.+ ..|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~-a~e~~~~~PDI---~t~aK~L-~gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW-AQEYFGVTPDI---TTVAKPL-GGG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH-HHHHhCcCCcc---eeehhhc-cCC
Confidence 555655556666664 477789999999999999999999999876544321 22222223233 3789985 568
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|..++.+ ++.+.+..- .+.+++.++++..++...|+
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~ 323 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLD 323 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHH
Confidence 9999999865 477777643 24578899999999888765
No 360
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=6.7e-10 Score=99.55 Aligned_cols=232 Identities=14% Similarity=0.108 Sum_probs=151.9
Q ss_pred CCeeecCCCCCCCC--CCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 45 RPVIPLGHGDPAAF--PCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g~p~~~--~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..++|++.-+..-| ...++.+.+.+++...--.- ....-+...-..++++.+|+|+. .++.+++..| -
T Consensus 136 ~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f 207 (519)
T KOG1357|consen 136 SRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-F 207 (519)
T ss_pred eeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-c
Confidence 34566664432111 12456777777776553210 00011222234567777788774 3445666666 6
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------C-----ccEE
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------N-----TAAI 188 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~-----~~~i 188 (311)
......+.+|+.+| .-|+-....|......++..|+.+...... |+.+||+.+++ + .+.+
T Consensus 208 ~TNs~~~p~l~~~g-sLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ 279 (519)
T KOG1357|consen 208 ATNSMNIPSLLGKG-SLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKIL 279 (519)
T ss_pred cccccCcceeecCC-cceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchhee
Confidence 66778889999999 889989999999999999999999988753 55666665542 1 2233
Q ss_pred EE-eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547 189 VI-INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 189 ~i-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
++ ..-...-|.+.. +.+++++++++...++.||+|+.-.. .|....-+...++.+..|.+++|+|+|++.|
T Consensus 280 iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G--- 353 (519)
T KOG1357|consen 280 ICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG--- 353 (519)
T ss_pred eeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---
Confidence 33 333456677766 99999999999999999999986433 2333333444556666799999999999999
Q ss_pred eEEEeeCCCCccchhhHHHHHhhhhcc----ccCCCchhHHHHHh
Q 021547 266 GWLATNDPNGVLQKSGIVGSIKACLGV----RSGPSTLIQVCEMF 306 (311)
Q Consensus 266 G~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~q~~~~~ 306 (311)
||+.++. ++++.++..... +..+++++|.....
T Consensus 354 Gyiagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~ss 390 (519)
T KOG1357|consen 354 GYIAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILTS 390 (519)
T ss_pred ceecCcH--------HHHhhhccCCCceeecccCChHHHHHHHHH
Confidence 9988754 367777765332 34556666655443
No 361
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.01 E-value=3.5e-09 Score=96.76 Aligned_cols=181 Identities=13% Similarity=0.036 Sum_probs=113.0
Q ss_pred CCCcHHHHHHHHHHHhcCC-CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe-CChHHHHHHHHHHHhcCCCC
Q 021547 61 FRTAAVAEDAIVDSVRSSM-FNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYIT-LGCMEAVEIILTVITRLGAA 136 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~-~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t-~g~~~a~~~~~~~l~~~g~d 136 (311)
...++.++++|.....+-. ..++++ ..-+.+.|+.++++++. .+..+|+++ +|+|.++++++..+..+ +
T Consensus 12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~-----~~~~~v~f~~gs~T~a~~~~~~~l~~~--~ 84 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSL-----PDGYEVILGNGGATAFWDAATFGLIEK--K 84 (361)
T ss_pred cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCC-----CCCceEEEECCchhHHHHHHHHhcccc--c
Confidence 4567889999775421110 112222 22345667777777732 123478876 55999999999998743 3
Q ss_pred EEEecCCCCc-chHHHHHHc--CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 021547 137 NILLPRPGWP-FYESFAKRN--HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA 213 (311)
Q Consensus 137 ~Vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~ 213 (311)
.+++..-.|. .+.+.+... +.++..++... +. .++..++++++++.+++..|.||...| +++| +
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~ 151 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GS-----APEPQADPGVDVIAWAHNETSTGVAVP---VRRP---E 151 (361)
T ss_pred ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CC-----CCCCccCCCCCEEEEcccCCccceecc---cccc---c
Confidence 3344445554 233444442 22555555421 21 222245678999999999999999999 4444 4
Q ss_pred HHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 214 RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 214 ~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+++|+++++|.+.+. |..+..+... .+++.|..|.++.+|- ++.++++
T Consensus 152 ~~~g~~~iVDavqs~----g~~~idv~~~-----D~~~~s~~K~lg~~~G-l~~~~~s 199 (361)
T TIGR01366 152 GSDDALVVIDATSGA----GGLPVDIAET-----DVYYFAPQKNFASDGG-LWLAIMS 199 (361)
T ss_pred ccCCCeEEEEcCccc----cCCCCCHHHC-----CEEEEEchhhcCCCCc-eEEEEEC
Confidence 789999999999986 2233333332 2899999999998852 4444443
No 362
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.01 E-value=1e-07 Score=85.62 Aligned_cols=222 Identities=17% Similarity=0.082 Sum_probs=152.2
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH-HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR-RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
..++++.+++.+.+.......|.-..|...-| ..+++.+.. ...++.+++++..+.|+.+++.++..+. +|++
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~----~~~aea~~ivnnn~aAVll~~~al~~~~--EvVi 111 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCG----LTGAEAAAIVNNNAAAVLLTLNALAEGK--EVVV 111 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhc----ccchhheeeECCcHHHHHHHHhhhccCC--eEEE
Confidence 35688899999888755433555433433222 244444432 3356889999999999999999998744 5554
Q ss_pred c----C-CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC-CCccCCCHHHHHHHHHHHH
Q 021547 141 P----R-PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN-PCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 141 ~----~-p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~ 214 (311)
. . +.+++....++..|.+++.+... ......+++.++++++++++-++.+| +.--.++ +++++++|+
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~ 184 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAH 184 (395)
T ss_pred EccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHH
Confidence 3 2 57788999999999999998642 24688999999999999987776544 3222445 788999999
Q ss_pred HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccc
Q 021547 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVR 293 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~ 293 (311)
++|+++++|.+-+..+-... .+..+-..+..++++|-.|.++ |.+-|.|++.. +++.+++.. ....
T Consensus 185 ~~~lpvivD~aSg~~v~~e~---~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkK--------elI~~lq~~~l~Ra 251 (395)
T COG1921 185 EKGLPVIVDLASGALVDKEP---DLREALALGADLVSFSGDKLLG--GPQAGIIVGKK--------ELIEKLQSHPLKRA 251 (395)
T ss_pred HcCCCEEEecCCcccccccc---chhHHHhcCCCEEEEecchhcC--CCccceEechH--------HHHHHHHhhhhhhh
Confidence 99999999999987643111 1222222333488999999865 56678887732 588887776 3334
Q ss_pred cCCCchhHHHHHhhhh
Q 021547 294 SGPSTLIQVCEMFLLV 309 (311)
Q Consensus 294 ~~~~~~~q~~~~~~l~ 309 (311)
.-+..+..+++.+.|+
T Consensus 252 lrv~K~tla~l~~aLe 267 (395)
T COG1921 252 LRVDKETLAALEAALE 267 (395)
T ss_pred hhcCcHhHHHHHHHHH
Confidence 4556666666655543
No 363
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.97 E-value=2.6e-08 Score=93.40 Aligned_cols=247 Identities=13% Similarity=0.030 Sum_probs=137.1
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHH-HhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDS-VRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.+++.++||..|--... .--.+|.+.+++.++ .... ....|.. ....++-+.+++.+.+..+ -.-+.|+++++
T Consensus 55 ~dG~~ylD~~sg~~~~~-lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIP-IGYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhc-CCCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence 35889999987732211 124678999999874 2221 1112221 1123344444432222222 12368999999
Q ss_pred hHHHHHHHHHHHhc--------------------------CC--CCEEEecCCCCcchHHHHHH-cCcE-----------
Q 021547 119 CMEAVEIILTVITR--------------------------LG--AANILLPRPGWPFYESFAKR-NHIE----------- 158 (311)
Q Consensus 119 ~~~a~~~~~~~l~~--------------------------~g--~d~Vl~~~p~~~~~~~~~~~-~g~~----------- 158 (311)
|++|++.+++.... .| +.+|+....+|.+....+.. .+..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999998887631 11 12799888888765433222 2211
Q ss_pred EEEeeccCCC-Cc-----------ccCHHHHHhhcC---CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEE
Q 021547 159 VRHFDLLPER-GW-----------EVDLEAVEALAD---ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 159 ~~~~~~~~~~-~~-----------~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~ 222 (311)
...+|..... .+ .-+++.+++.+. .++.++++.......|... +++.++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1111111000 00 013455666664 2455566655566678766 677899999999999999999
Q ss_pred eccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCch
Q 021547 223 DEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTL 299 (311)
Q Consensus 223 D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 299 (311)
||++.++...|.. .....++- .+++ .+++|.++..| +++..+ ....... ....++..+++
T Consensus 291 DEV~tGfGrtG~~-fa~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 291 DEVQTGVGATGKF-WAHEHWNLDDPPDM---VTFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred eeeeeCCCCCcch-hHHHhcCCCCCCCE---EEehhhhccCC----ccccch---------hccCCCCcccccCCCCCHH
Confidence 9999887554432 22222222 1334 37799875444 333221 1111111 23346678888
Q ss_pred hHHHHHhhhh
Q 021547 300 IQVCEMFLLV 309 (311)
Q Consensus 300 ~q~~~~~~l~ 309 (311)
+.+++.+.|+
T Consensus 354 ~~aaa~a~L~ 363 (464)
T TIGR00699 354 RALILREIIQ 363 (464)
T ss_pred HHHHHHHHHH
Confidence 8887775553
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.97 E-value=7.4e-08 Score=95.72 Aligned_cols=231 Identities=16% Similarity=0.073 Sum_probs=139.0
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----C----
Q 021547 63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-----L---- 133 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----~---- 133 (311)
.+|++.+++.+++.+-. .+....-..+-...+++.|.+..+.+ ..+.|+++++|++|++.+++.... .
T Consensus 383 ~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~ 459 (817)
T PLN02974 383 LQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE 459 (817)
T ss_pred CCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 48999999999987432 11111112344455666665422100 135899999999999987775521 1
Q ss_pred -----------CCCEEEecCCCCcchHHHHHHcCc----------E-----EEEeecc-------------CCC------
Q 021547 134 -----------GAANILLPRPGWPFYESFAKRNHI----------E-----VRHFDLL-------------PER------ 168 (311)
Q Consensus 134 -----------g~d~Vl~~~p~~~~~~~~~~~~g~----------~-----~~~~~~~-------------~~~------ 168 (311)
++.+||.....|.+-...+...+- . ...++.. +..
T Consensus 460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~ 539 (817)
T PLN02974 460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLE 539 (817)
T ss_pred ccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccc
Confidence 235788888888753222222111 0 0011100 000
Q ss_pred ----Ccc-----cC------------HHHHHhhcC--------CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhC
Q 021547 169 ----GWE-----VD------------LEAVEALAD--------ENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLG 217 (311)
Q Consensus 169 ----~~~-----~d------------~~~l~~~l~--------~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~ 217 (311)
.|. .+ .+.+++.+. ++..++++... +.-.|..+ ++.-++++.++|++||
T Consensus 540 ~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~g 619 (817)
T PLN02974 540 GEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRK 619 (817)
T ss_pred ccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 000 00 134555443 23444444442 56668765 6777999999999999
Q ss_pred CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh------h-
Q 021547 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA------C- 289 (311)
Q Consensus 218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~------~- 289 (311)
+++|.||++.+|...|.-+ ....++..++++ .++|.++ .| +++|.+++.+ ++.+.+.. +
T Consensus 620 ilLI~DEV~TGfGRtG~~f-a~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~--------~I~~~f~~~~~~~~~~ 686 (817)
T PLN02974 620 IPVIFDEVFTGLWRLGVES-AWELLGCKPDIA---CYAKLLT-GGLVPLAATLATE--------EVFEAFRGPSKLDALL 686 (817)
T ss_pred CEEEEeecccCCCcccchh-hHHhcCCCCCEE---eeccccc-CCCCccEEEEEcH--------HHHHhhccccccCCcc
Confidence 9999999999987666432 333444444555 7899964 57 6999999854 36666532 2
Q ss_pred hccccCCCchhHHHHHhhhh
Q 021547 290 LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 290 ~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+.+++.++++.+++.+.|+
T Consensus 687 hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 687 HGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred cCCCCCcCHHHHHHHHHHHH
Confidence 34577889999998877664
No 365
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.95 E-value=1.2e-08 Score=88.25 Aligned_cols=236 Identities=19% Similarity=0.117 Sum_probs=148.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+...+||-.+.-. ..+-.++|-+.+++++..+.-.+ ..|.+ -+.++.+.+..++ .-+.|+.++.+.
T Consensus 58 Gk~ylDflsaysa-VnqGhchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSA-VNQGHCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhh-cccCCCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------Ccceeeecccch
Confidence 5666666655222 12345788999999988763111 13544 3345666666666 345688888889
Q ss_pred HHHHHHHHHHhc--------C-CCCEEEecCCCCcchHH----------HHHHcCc---E-EEEeeccCCCCcccCHHHH
Q 021547 121 EAVEIILTVITR--------L-GAANILLPRPGWPFYES----------FAKRNHI---E-VRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 121 ~a~~~~~~~l~~--------~-g~d~Vl~~~p~~~~~~~----------~~~~~g~---~-~~~~~~~~~~~~~~d~~~l 177 (311)
+|.+.++....+ | ....|+.....|.+-.. ..+..|. . +..+|. -|.++|
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eal 199 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEAL 199 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHH
Confidence 999988877642 2 21234444444432110 1111110 0 112221 278999
Q ss_pred HhhcCCCccEEEEeCC-CCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 178 EALADENTAAIVIINP-CNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 178 ~~~l~~~~~~i~i~~p-~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
+.++++...+.|+.-| +...|++.|++. +++..++|++||+++|.||++.++..+|+ +.....-.-.+++| -|.
T Consensus 200 e~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~env~PDiv---ilg 275 (427)
T KOG1402|consen 200 EVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYENVRPDIV---ILG 275 (427)
T ss_pred HHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehhhcCCCeE---EEe
Confidence 9988875555555555 788998777665 99999999999999999999999877664 22221111122334 367
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++..=.+++.+++.+ +++..++.- .+.+...||++.+++.+.|+
T Consensus 276 KalSGG~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAale 322 (427)
T KOG1402|consen 276 KALSGGVYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALE 322 (427)
T ss_pred ccccCCeeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHH
Confidence 88766558888888754 477777766 45678899999888777654
No 366
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.95 E-value=6.4e-08 Score=90.73 Aligned_cols=251 Identities=13% Similarity=0.056 Sum_probs=134.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAED--AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++.++||..|--... .--.+|.+.+ ++++++..-.........-..+....+++.+.+..+ +-..+.|+++++|+
T Consensus 43 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs 120 (443)
T PRK08297 43 TGRRYLDMFTFFASSA-LGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA 120 (443)
T ss_pred CCCEeeecccCHhhhc-CCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence 5788888876621111 1235678888 888887531100000000111233334444443221 11236899999999
Q ss_pred HHHHHHHHHHhc-------------CCCCEEEecCCCCcchHHHHHHc-CcEEE-----------EeeccCC----CCcc
Q 021547 121 EAVEIILTVITR-------------LGAANILLPRPGWPFYESFAKRN-HIEVR-----------HFDLLPE----RGWE 171 (311)
Q Consensus 121 ~a~~~~~~~l~~-------------~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~-----------~~~~~~~----~~~~ 171 (311)
+|++.+++.... +++.+|+....+|.+....+... +.... .++.... ....
T Consensus 121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (443)
T PRK08297 121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED 200 (443)
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence 999998887731 12267998888887654333322 21100 0100000 0000
Q ss_pred ---------cCHHHHHhhcC---CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547 172 ---------VDLEAVEALAD---ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 172 ---------~d~~~l~~~l~---~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~ 238 (311)
-+++.+++.+. .++.++++.......|. ..+++.+++|.++|++||+++|.||++.++...|.. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a 279 (443)
T PRK08297 201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTA-WA 279 (443)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchH-HH
Confidence 02344455553 34555555544555565 467888999999999999999999999887555432 12
Q ss_pred ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH-HHh--hhhccccCCCchhHHHHHhhhh
Q 021547 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIK--ACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
...++-.++++ +++|.++ +|.+++... +. ++.. .+. .....+++.++++.+++.+.|+
T Consensus 280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 340 (443)
T PRK08297 280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--VD---EVEDNVFAVSSRINSTWGGNLVDMVRARRILE 340 (443)
T ss_pred HHhcCCCCCEE---Eeccccc-----ccceecchH--HH---HhhhhhccCccccCCCCCccHHHHHHHHHHHH
Confidence 22233333444 5799853 344443321 00 0111 111 1133466789998888877764
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.94 E-value=1.3e-07 Score=88.60 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=134.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAE--DAIVDSVRSSMFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~--~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+++.+|||..|--.... --.+|.+. +++.+++.......... ....+. ...+++.+.+..+ +-..+.++++++|
T Consensus 36 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~~v~f~~sG 112 (431)
T TIGR03251 36 DGRRYLDMFSFFASMAL-GMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLG-DPALPHLFFIEGG 112 (431)
T ss_pred CCCChhhcccChhhcCC-CCCChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence 57888888766322111 23567777 88888876432100111 111222 3334444433211 1134689999999
Q ss_pred HHHHHHHHHHHhc--------CC-----CCEEEecCCCCcchHHHHH-HcCcE-E--EEeec-------cC-------CC
Q 021547 120 MEAVEIILTVITR--------LG-----AANILLPRPGWPFYESFAK-RNHIE-V--RHFDL-------LP-------ER 168 (311)
Q Consensus 120 ~~a~~~~~~~l~~--------~g-----~d~Vl~~~p~~~~~~~~~~-~~g~~-~--~~~~~-------~~-------~~ 168 (311)
++|++.+++.... .| +.+|+....+|.+....+. ..+.. . ...+. .+ ..
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence 9999998887642 11 2679988888876543222 22211 0 00010 00 00
Q ss_pred Ccc-------cCHHHHHhhcC---CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547 169 GWE-------VDLEAVEALAD---ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI 237 (311)
Q Consensus 169 ~~~-------~d~~~l~~~l~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~ 237 (311)
... -+++++++.+. .++.++++.......|.. .+++.+++|.++|++||+++|+||++.++...|.. .
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~-~ 271 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTA-W 271 (431)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchH-H
Confidence 000 12344444442 356666666656667765 57788999999999999999999999987655432 2
Q ss_pred cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH-Hh--hhhccccCCCchhHHHHHhhhh
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS-IK--ACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
....++-.++++ .++|.+ +. .|++. ... +. ++... +. .....+++.++++.+++.+.|+
T Consensus 272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~-~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (431)
T TIGR03251 272 AYQQLGVQPDIV---AFGKKT--QV--CGIMA-GRR--VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILE 333 (431)
T ss_pred HHHhcCCCCCEE---EecccC--cc--ceEEe-cch--HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence 222333333444 478874 21 24543 321 00 11111 11 1123356678888877776654
No 368
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.94 E-value=1.9e-08 Score=88.91 Aligned_cols=250 Identities=18% Similarity=0.112 Sum_probs=152.9
Q ss_pred hccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 39 VDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 39 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
+....++.++|+-.|.-..- .-.++|.+.+++.+++..- ....|..+ -..++-+++++.+ +-.-..++++
T Consensus 44 lyDe~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~ 115 (442)
T KOG1404|consen 44 LYDEEGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFV 115 (442)
T ss_pred EEcCCCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEe
Confidence 33445888888887733221 2347889999999988531 23345543 3567777777777 3344569999
Q ss_pred CChHHHHHHHHHHHhc-CCCCEEEecCCCCcchH-HHHHHcCcEEEEeec-------------cCCCC-cccC-------
Q 021547 117 LGCMEAVEIILTVITR-LGAANILLPRPGWPFYE-SFAKRNHIEVRHFDL-------------LPERG-WEVD------- 173 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~-------------~~~~~-~~~d------- 173 (311)
+++++|+++++..... .|.-.++--..+|.+.. ..+-..+...-..+. ++..+ |+=+
T Consensus 116 nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d 195 (442)
T KOG1404|consen 116 NSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASD 195 (442)
T ss_pred cCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHH
Confidence 9999999988776642 33235666666665432 222222222111111 00000 0000
Q ss_pred --HHHHHhhc---CCCccEEEEe-CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 174 --LEAVEALA---DENTAAIVII-NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 174 --~~~l~~~l---~~~~~~i~i~-~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
.+++++.+ .+++.+.++. +...-.|.+ +++--+++..++|+++|.++|.||+..++...| .+..+.+.+-
T Consensus 196 ~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v-- 272 (442)
T KOG1404|consen 196 RYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGV-- 272 (442)
T ss_pred HHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCC--
Confidence 13334433 2344555555 445555654 344459999999999999999999999987666 4444444333
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-c-cccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-G-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~ 309 (311)
+=-|-+++|.. ..|+++|.++... ++.+-+.+.. . .+...+|++.++..+.|+
T Consensus 273 -~PDIvTmAKgi-GnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~ 327 (442)
T KOG1404|consen 273 -VPDIVTMAKGI-GNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLK 327 (442)
T ss_pred -CccHHHHHhhc-cCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHH
Confidence 33344999995 5789999999854 3666666554 2 457889998888877664
No 369
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.88 E-value=2e-07 Score=84.48 Aligned_cols=198 Identities=12% Similarity=0.003 Sum_probs=124.3
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-----MFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-----~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..++|+-|- ...|++|++.+++.+-.. .....++ ++-..++-+.+.+.+++.++++-+-+-+++..|+
T Consensus 4 ~~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Ggg 77 (364)
T PRK12462 4 NQLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGS 77 (364)
T ss_pred ccceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccH
Confidence 467888883 346788888888766421 1112222 2344556666666676666654333334556779
Q ss_pred HHHHHHHHHHHhcCCCCEEE--ecCCCCcc-hHHHHHHcCcEEEEeeccCCCC--cccCHHHHHhhcCCCccEEEEeCCC
Q 021547 120 MEAVEIILTVITRLGAANIL--LPRPGWPF-YESFAKRNHIEVRHFDLLPERG--WEVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl--~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
|.+++++...|+.+| |+++ +..-.|.. +...++..| ++..+......+ ..++++++ .++++.+.+.+++-.
T Consensus 78 T~~~ea~~~Nll~~g-~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NE 153 (364)
T PRK12462 78 SLQFSMIPMNFSRPG-AAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNE 153 (364)
T ss_pred HHHHHHHHHHcCCCC-CcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCC
Confidence 999999999999999 8665 44444432 345666666 444442111111 23445554 234567788888878
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
..+|+.++ ++.+.++.++|+|.+-..+. .+..+..++ +++.|.-|.+|.|| ++.+++++
T Consensus 154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~ 212 (364)
T PRK12462 154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRR 212 (364)
T ss_pred CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECH
Confidence 89999886 22223689999999988633 334444442 88889999999777 45666554
No 370
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.88 E-value=1e-07 Score=81.63 Aligned_cols=174 Identities=19% Similarity=0.193 Sum_probs=117.2
Q ss_pred CCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcchHH---------
Q 021547 82 CYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPFYES--------- 150 (311)
Q Consensus 82 ~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~~~~--------- 150 (311)
+|+. +-|-..|.+..|+-+ |.....-+..+.+| |+|+..++..+++|| |+.+.. .--|.....
T Consensus 59 GYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~isG-THAI~~aLfg~LRpg-Dell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVF----GAEAALVRPQIISG-THAIACALFGILRPG-DELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred CCCccccchhHHHHHHHHHh----ccccceeeeeeecc-hhHHHHHHHhccCCC-CeEEEecCCcchhHHHHhccCCCCc
Confidence 4543 346555555555555 32333334455555 899999999999999 988854 333433322
Q ss_pred -HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccc
Q 021547 151 -FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKL--GILVIADEVY 226 (311)
Q Consensus 151 -~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay 226 (311)
.++..|+....+++. .++.+|.+.++..+++++|++.+... .+..--.++.+++++++++.++- |+++++|++|
T Consensus 133 gSL~dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY 210 (416)
T COG4100 133 GSLKDFGIKYKAVPLT--ADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY 210 (416)
T ss_pred ccHHHhCcceeecccc--cCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 445666777777765 35679999999999999999988753 44444458889999999999876 7999999999
Q ss_pred cCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce-eeEEEe
Q 021547 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR-FGWLAT 270 (311)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r-~G~i~~ 270 (311)
++|+-.-+|. . -+..+..+|+-|+-|..=.. -||+.+
T Consensus 211 GEFvE~~EPt-~------vGaDliAGSLIKNpGGgiaktGGYiaG 248 (416)
T COG4100 211 GEFVEEKEPT-H------VGADLIAGSLIKNPGGGIAKTGGYIAG 248 (416)
T ss_pred hhhhhccCcc-c------cchhhhccceeeCCCCceeeccceeec
Confidence 9987543322 1 11227888999984332111 266655
No 371
>PLN02452 phosphoserine transaminase
Probab=98.85 E-value=1.5e-07 Score=85.77 Aligned_cols=199 Identities=10% Similarity=-0.008 Sum_probs=127.0
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
..+++|+-|- ...|+.|++++++.+-... ....+ .+.-..++-+.+.+.+++.++.+-+-+-+++..|
T Consensus 6 ~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gs 79 (365)
T PLN02452 6 GRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGG 79 (365)
T ss_pred CceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCc
Confidence 4578898884 4568999999988753210 11111 1234455666666666666664333334566788
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCC--cccCHHHHHhhcCCCccEEEEeCCC
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERG--WEVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
+|.+++++...|+.+| +++++...+..+ ....++..|...+.... ...+ ..+++++++. +++.+.+.+++..
T Consensus 80 gt~~~ea~~~nl~~~~-~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hnE 155 (365)
T PLN02452 80 ASTQFAAIPLNLCKPG-DKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICANE 155 (365)
T ss_pred cHHHHHHHHHhcCCCC-CeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCCC
Confidence 8999999999999999 888877766654 34677778764333321 1111 1345555422 4567888888888
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
..||+.++ +++++. ++++|+|.+..... .+..+..++ +...|..|.+|.+| +|.++++.
T Consensus 156 TstGv~~~--~~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~ 214 (365)
T PLN02452 156 TIHGVEFK--DYPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK 214 (365)
T ss_pred CCCcEecC--cccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEcH
Confidence 89999643 255543 38999999998632 333443332 34469999999888 67777653
No 372
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.82 E-value=1e-07 Score=87.09 Aligned_cols=178 Identities=14% Similarity=-0.000 Sum_probs=117.8
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCC
Q 021547 67 AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGW 145 (311)
Q Consensus 67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~ 145 (311)
+.+++.+..-+. .++ ++...++-+.+.+.+++.++.+.+.+-++++.|+|.++++++..++ ++| ++||+.. .|
T Consensus 19 ~~~~~~~~~~~~--~HR--s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g-~~vLv~g-~F 92 (374)
T TIGR01365 19 SIEELKNAPLGR--SHR--SKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRG-VDVLAWE-SF 92 (374)
T ss_pred hHHHHhhhhccc--CcC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCC-CeEEEEC-HH
Confidence 566665433211 123 3355667677777777766643233336779999999999999998 478 8999865 55
Q ss_pred cch-H-HHHHHcCcE-EEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 146 PFY-E-SFAKRNHIE-VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 146 ~~~-~-~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
..- . .+++..|++ +..+.. ..+..+++++++. . +.+++++.-..||+..+ +++++..+ ++.++|+
T Consensus 93 G~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliV 160 (374)
T TIGR01365 93 GKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTIC 160 (374)
T ss_pred HHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC--C---CCEEEecCCCchheecc---cccccccc--CCCcEEE
Confidence 432 4 788889994 677653 2444678888873 1 23677887889999998 44444322 4899999
Q ss_pred eccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 223 DEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 223 D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|.+-+.. + .+..+.. -.+++.|..|.+++|+ .++++++++
T Consensus 161 DavSs~g---~-~~l~~d~-----iDv~~tgsQK~L~~pp-Gls~v~vs~ 200 (374)
T TIGR01365 161 DATSAAF---A-QDLDYHK-----LDVVTFSWQKVLGGEG-AHGMLILSP 200 (374)
T ss_pred Eccchhc---C-CCCChhH-----CcEEEEechhccCCCC-ceEEEEECH
Confidence 9998853 2 2233332 2388999999998875 355566543
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.72 E-value=1.6e-06 Score=87.73 Aligned_cols=150 Identities=19% Similarity=0.175 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cC--CCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RL--GAANILLPRPGWPFYES----FAKRNHIEVRHFD 163 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~--g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 163 (311)
++++.++++. +++..++.+..++|.+.++++.++. .+ + ++|++++..|+.+.. .++..|++++.++
T Consensus 125 ~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~ 197 (954)
T PRK05367 125 NFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKS-NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGD 197 (954)
T ss_pred HHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCC-CEEEEcCccCHHHHHHHHHHHHhCCCEEEEec
Confidence 3555566666 4677899999999999998888873 23 4 899999999997664 4567899999987
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
... +.+ .+++.++++.+ .|.+|.+.+ +++|+++|+++|+++++|.....+.. .. +...+.
T Consensus 198 ~~~------d~~------~~~~~~vlvq~-p~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~-l~---~pge~G 257 (954)
T PRK05367 198 AAK------ALD------HDDVFGVLLQY-PGTSGEVRD---YTALIAAAHARGALVAVAADLLALTL-LT---PPGEMG 257 (954)
T ss_pred Ccc------CCC------cccEEEEEEec-CCCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC-CC---ChhhcC
Confidence 532 111 23444454445 478999987 99999999999999999875532221 11 122232
Q ss_pred CCCCeEEEecCccc-----CCCCcceeeEEEeeC
Q 021547 244 SIVPVITLGSISKR-----WIVPGWRFGWLATND 272 (311)
Q Consensus 244 ~~~~~i~i~s~sK~-----~~~~G~r~G~i~~~~ 272 (311)
-.|+++|..|+ ||.|| .|++.+.+
T Consensus 258 ---aDi~vgs~qkfg~P~g~GGP~--aGflavr~ 286 (954)
T PRK05367 258 ---ADIAVGSAQRFGVPMGFGGPH--AAYFAVRD 286 (954)
T ss_pred ---CCEEEeeCcccCCCCCCCCCC--EEEEEECH
Confidence 33999999997 66665 88887754
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.68 E-value=5e-08 Score=86.87 Aligned_cols=227 Identities=19% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH-HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR-RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
+.++++.+++.+.........|.-..|-.--| ..+.+.+.. -..++..+++++...|+.+++.+++ +| .+|++
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~----ltgAeaA~VvNnnaAAv~L~l~~la-~~-~EvIv 90 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCE----LTGAEAALVVNNNAAAVLLALNTLA-KG-KEVIV 90 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccc-cc-ccccc
Confidence 45677888887776533223443322222122 223333332 2256788899999999999999996 45 57777
Q ss_pred cCCCCc------chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC--ccCCCHHHHHHHHHH
Q 021547 141 PRPGWP------FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC--GNVLTYQHLQKIAET 212 (311)
Q Consensus 141 ~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt--G~~~~~~~l~~l~~l 212 (311)
..-.-. .+.+..+..|.+++.+... ....+++++++++++|.+++-.+++|-. |.. ..-.+++++++
T Consensus 91 sRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~l 165 (367)
T PF03841_consen 91 SRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITENTAALLKVHTSNFRIQGFT-GEVSLEELAEL 165 (367)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc-ccccHHHHHHH
Confidence 643322 2457888899999888753 2457889999999999999999987642 221 11248999999
Q ss_pred HHHhCCEEEEeccccCCc----cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547 213 ARKLGILVIADEVYGHLA----FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288 (311)
Q Consensus 213 ~~~~~~~li~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 288 (311)
+++||+++++|-.-+.+. |+-..-..+......+-.++++|--|.+|.|- .|.|++. .+++++++.
T Consensus 166 a~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gk--------k~lI~~lk~ 235 (367)
T PF03841_consen 166 AKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGK--------KELIEKLKK 235 (367)
T ss_dssp HHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEE--------HHHHHHHHH
T ss_pred HhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeC--------HHHHHHHhh
Confidence 999999999999885432 11001122334444555589999999977665 6888874 258898887
Q ss_pred h-hccccCCCchhHHHHHhhhh
Q 021547 289 C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 289 ~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
. ..-..-+..+..+++.+.|+
T Consensus 236 ~pl~RalrvdK~tla~L~atL~ 257 (367)
T PF03841_consen 236 HPLGRALRVDKLTLAALEATLR 257 (367)
T ss_dssp HHHTTT-B--HHHHHHHHHHHH
T ss_pred CCCcceEeeCHHHHHHHHHHHH
Confidence 6 22234566666666655443
No 375
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.63 E-value=2.8e-06 Score=77.07 Aligned_cols=181 Identities=18% Similarity=0.108 Sum_probs=131.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---c--CCC--CEEEecCCCCcchHHHHHHcCcEE
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---R--LGA--ANILLPRPGWPFYESFAKRNHIEV 159 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~--~g~--d~Vl~~~p~~~~~~~~~~~~g~~~ 159 (311)
++..++.+++.+++...++-+ +..-=..|+|+|+++.+...... . .|. ..++.+...+..+..+++..+.++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 466778888888888777655 22333668888988555444432 1 232 468888888999999999999999
Q ss_pred EEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccC--CCCC
Q 021547 160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFG--STPY 236 (311)
Q Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~--~~~~ 236 (311)
..+++++ .++.+|+....+.+++++.+++...|+.|+|..=+ +++|.++..+ +++.+++|.+-++|.-. ...+
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9999865 78899999999999999999999999999999865 8888888888 99999999999987642 1111
Q ss_pred CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 237 IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
..+ .+......=.-.+-+|. |+.--..||++-.+.+
T Consensus 271 ~~f-dFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~ 306 (491)
T KOG1383|consen 271 EEF-DFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKE 306 (491)
T ss_pred ccc-ccCCCCceeEeecccee-eeeecCcEEEEEcccc
Confidence 111 11111111112245675 7776778999987754
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.62 E-value=3.3e-06 Score=76.06 Aligned_cols=175 Identities=20% Similarity=0.209 Sum_probs=121.4
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe--CChHHHHHHHH---HHH-hcCC---CCEEEecCCCCcc
Q 021547 80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYIT--LGCMEAVEIIL---TVI-TRLG---AANILLPRPGWPF 147 (311)
Q Consensus 80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t--~g~~~a~~~~~---~~l-~~~g---~d~Vl~~~p~~~~ 147 (311)
.+.|.| .+|+.++...+.+||.+.-| -|.|.+. +|+ ++=.+-+ +.. ...| ++.||+++..|..
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGA-qGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGA-QGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCc-chhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 335554 45888889999999987443 3455543 333 3333222 222 2222 3789999999998
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
-...+...|.+++.++.+ +++.+|+++|++.+.+++.++.+++|+. .|.. .+.+.+|+++.+++|-.|..|.+--
T Consensus 170 NPASAam~G~~VV~V~~~--~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANl 244 (496)
T COG1003 170 NPASAAMAGFKVVVVKCD--ENGNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANL 244 (496)
T ss_pred ChhhHhhcCceEEEEecC--CCCCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcch
Confidence 899999999999999865 4567999999999999999999999864 4443 4679999999999999999999976
Q ss_pred CCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEe
Q 021547 228 HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLAT 270 (311)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~ 270 (311)
.-..+-..+ .+.+-.|.=..++|+|..| |-..|=|.+
T Consensus 245 NA~vG~~rP------Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV 285 (496)
T COG1003 245 NAIVGLARP------GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV 285 (496)
T ss_pred hhhhccccc------cccccceEEeecccccccCCCCCCCCCCceeh
Confidence 543321111 1122225555889988665 444555443
No 377
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.61 E-value=1.8e-06 Score=87.33 Aligned_cols=183 Identities=18% Similarity=0.154 Sum_probs=118.3
Q ss_pred CCcHHHHHHHHHHHhc-CCCCCCCCC--CC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cC
Q 021547 62 RTAAVAEDAIVDSVRS-SMFNCYAPM--FG----LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RL 133 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~-~~~~~Y~~~--~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~ 133 (311)
-.|+.+.+.+.+...- -.+..|.+. +| +.++++.+++++ +++.+++.++.++|.+.++++.++. .+
T Consensus 116 ~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 116 HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhccc
Confidence 4567776777654431 123345542 33 356777777777 5688999999999999998887773 32
Q ss_pred C-CCEEEecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHH
Q 021547 134 G-AANILLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208 (311)
Q Consensus 134 g-~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~ 208 (311)
| .++|++++..|+.+.. .++..|++++.++.... + ...+...+++ .+-.|.+|.+.+ +++
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v~d---v~~ 254 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEVLD---YAE 254 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEEcC---HHH
Confidence 2 2789999999998754 44557889888875321 1 1122233333 333456999988 999
Q ss_pred HHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC---CCCcceeeEEEeeC
Q 021547 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW---IVPGWRFGWLATND 272 (311)
Q Consensus 209 l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~---~~~G~r~G~i~~~~ 272 (311)
|+++|+++|+++++ .+... ... ...+...+. -.|++++..|+. |..|-+.|++.+.+
T Consensus 255 I~~~ah~~GaL~iV-aad~l-al~--~l~~pge~G---ADi~vgsgqKwg~P~G~GGP~aGflavr~ 314 (993)
T PLN02414 255 FVKNAHANGVKVVM-ATDLL-ALT--MLKPPGEWG---ADIVVGSAQRFGVPMGYGGPHAAFLATSQ 314 (993)
T ss_pred HHHHHHHcCCEEEE-EECHH-Hhc--CCCCHhhcc---CcEEEECCCccccCCCCCCCCeeEEEECH
Confidence 99999999999999 44432 111 111222332 338899999984 12345589988854
No 378
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.55 E-value=6.2e-06 Score=71.74 Aligned_cols=205 Identities=16% Similarity=0.104 Sum_probs=128.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHH---hcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSV---RSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~---~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.+.++|.++.+.-+ ..++....+..+... ......++. ....-..+-+.+.+.+.... +..+.+++++.+
T Consensus 28 lp~~viyLdgnSLG----a~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi--GA~~~Evvv~dt 101 (407)
T COG3844 28 LPGGVIYLDGNSLG----ARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI--GARAGEVVVTDT 101 (407)
T ss_pred CCCCeEEeeccccc----cCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh--cCCCCceEEeCC
Confidence 37889999988733 222223333333332 221111122 12233344444555554322 457789999999
Q ss_pred hHHHHHHHHHHHhc--CCCCEEEecCCCCcch-----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547 119 CMEAVEIILTVITR--LGAANILLPRPGWPFY-----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII 191 (311)
Q Consensus 119 ~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 191 (311)
++-.++.++.+..+ +| ++|++++-.-.+. ...+...+.. ++ -...+.++++++++++++..++++
T Consensus 102 ts~nl~k~L~aalr~~~~-r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~----~~~~~~P~~~~~~~~dd~AvV~L~ 173 (407)
T COG3844 102 TSINLFKVLAAALRPQEG-RRVIVSEGDNFPTDLYIAEGLADLLGIG---YD----LEGVIAPRALEEAITDDVAVVLLS 173 (407)
T ss_pred cchHHHHHHHHHhccCCC-ceEEeecCCCCCcchhhhcchhhhhccc---cc----ceeeeChHHHHHhhccceEEEEec
Confidence 98888877777654 57 7888775433322 2233444433 11 112356779999999999999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC-CcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~ 270 (311)
+.++-||+.++ +.+|.+++++++++++-|-+|+. |.-+..+. ..+..+-|++..|.++. ||-. +++.+
T Consensus 174 ~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh---~~gaDfaigcsyKYLNgGPGap-a~l~v 242 (407)
T COG3844 174 HVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSA----GAVPVDLH---AAGADFAIGCSYKYLNGGPGAP-AGLFV 242 (407)
T ss_pred cccccccceee---HHHHHHHHHhcCceEEeehhccc----CCcceeec---ccCCCeeeeeeceeccCCCCCc-eeEEe
Confidence 99999999999 99999999999999999999986 22222222 23334889999998765 5544 44444
Q ss_pred eC
Q 021547 271 ND 272 (311)
Q Consensus 271 ~~ 272 (311)
.+
T Consensus 243 ~~ 244 (407)
T COG3844 243 AP 244 (407)
T ss_pred cc
Confidence 43
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.33 E-value=2.2e-05 Score=70.57 Aligned_cols=196 Identities=13% Similarity=0.074 Sum_probs=119.1
Q ss_pred HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------CC----CC
Q 021547 68 EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-------LG----AA 136 (311)
Q Consensus 68 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-------~g----~d 136 (311)
.+.+...+..+.+ -|...++..-..+.+-..+.+-.||....|.|+--.|+.+.+++...+--+ .| .+
T Consensus 119 g~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~ 197 (510)
T KOG0629|consen 119 GEWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPP 197 (510)
T ss_pred HHHHHhccCCCCc-eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCc
Confidence 3344433333333 577666766666667666666678877766666666666666654443311 12 13
Q ss_pred EEE-ecCCCCcchHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC-Cc----cEEEEeCC-CCCCccCCCHHHH
Q 021547 137 NIL-LPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE-NT----AAIVIINP-CNPCGNVLTYQHL 206 (311)
Q Consensus 137 ~Vl-~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~-~~----~~i~i~~p-~nptG~~~~~~~l 206 (311)
-|+ .+.-+|.+....+..+|+. ++.++. ...+++++++||+.+.. +. +.++-++. +.-.|..-| |
T Consensus 198 lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L 272 (510)
T KOG0629|consen 198 LILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---L 272 (510)
T ss_pred EEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---H
Confidence 344 4567788888999999954 555543 35578999999996542 22 23332232 456777766 9
Q ss_pred HHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 207 QKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 207 ~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
..++++|++|++|+++|.+|++ +....+...-+...... + =+..+.+|..| ..+.++.++...
T Consensus 273 ~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera-~-SvtwnpHK~~g-aplqCsa~l~r~ 336 (510)
T KOG0629|consen 273 NGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERA-N-SVTWNPHKLMG-APLQCSAFLTRE 336 (510)
T ss_pred HHHHHHHHhcCEEEEeecccccccccChhhHhhccCcccc-C-ceeecHHHhhc-CcchhhHHHHHH
Confidence 9999999999999999999997 33221111111111111 1 34458899865 457777776644
No 380
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.32 E-value=1.1e-05 Score=73.26 Aligned_cols=173 Identities=11% Similarity=0.118 Sum_probs=114.0
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCC--------CCCCEEEeCChHHH
Q 021547 54 DPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKL--------SADDIYITLGCMEA 122 (311)
Q Consensus 54 ~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~--------~~~~v~~t~g~~~a 122 (311)
+|.++..+|....+...+.+.+... -.+.+...+-.+||+.-+.+|+.+..+++. .+--|+.++.+-..
T Consensus 73 hP~fhAyfpa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~ 152 (511)
T KOG0628|consen 73 HPHFHAYFPAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESV 152 (511)
T ss_pred CCceeeEccCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhH
Confidence 5665556777555556666655432 122455666789999999999998777543 22234444443333
Q ss_pred HHHHHHHHh------cCC-----------CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC-
Q 021547 123 VEIILTVIT------RLG-----------AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN- 184 (311)
Q Consensus 123 ~~~~~~~l~------~~g-----------~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 184 (311)
+-+++.+-. +.+ .=.+.+.+..|.+....+...+.+...++.+ .++.++.+.|++++.++
T Consensus 153 lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td--~n~~mr~~~L~~AIe~D~ 230 (511)
T KOG0628|consen 153 LVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTD--ENFGMRGDTLRKAIEEDI 230 (511)
T ss_pred HHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecc--cCcCCCHHHHHHHHHHHH
Confidence 333333321 111 0135678899999999999999998888764 38999999999988652
Q ss_pred ----ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 185 ----TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 185 ----~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
++.+++.+.. .|| ...-+++.+|..+|+++|+|+++|.+|++-.
T Consensus 231 arGlIPf~v~at~G-TT~-~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa 278 (511)
T KOG0628|consen 231 ARGLIPFFVCATLG-TTS-SCAFDELEELGPVCREEGLWLHVDAAYAGSA 278 (511)
T ss_pred hCCCccEEEEEeec-Ccc-ccccccHHHhcchhhhcCEEEEeehhhcccc
Confidence 2333333332 122 2344579999999999999999999999643
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.19 E-value=1.8e-05 Score=69.73 Aligned_cols=138 Identities=20% Similarity=0.157 Sum_probs=105.4
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCC----CCEEEecCCCCc-chHHHHHHcC
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG----AANILLPRPGWP-FYESFAKRNH 156 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g----~d~Vl~~~p~~~-~~~~~~~~~g 156 (311)
.|+.+.++..|+.++.+.+. -+.++.|+-+..|-++++..+++++ ..+.++++..|. ......+..|
T Consensus 74 AYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 59988999999999999882 3678889999999888888887644 044445555554 4456677788
Q ss_pred cEEEEeeccCCC--------CcccCHHHHHhhcCC----CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 157 IEVRHFDLLPER--------GWEVDLEAVEALADE----NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 157 ~~~~~~~~~~~~--------~~~~d~~~l~~~l~~----~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
..++.++.+... .+.+|++.|++.+++ +...|+++.. |.-.|+..|.+.+++..++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 887777654321 246899999998864 5666666644 558889999999999999999999999999
Q ss_pred cccc
Q 021547 224 EVYG 227 (311)
Q Consensus 224 ~ay~ 227 (311)
.+-.
T Consensus 226 a~Rf 229 (471)
T COG3033 226 AARF 229 (471)
T ss_pred hhhh
Confidence 8754
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.09 E-value=3e-05 Score=69.90 Aligned_cols=183 Identities=16% Similarity=0.156 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEeCChHHH-HHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC
Q 021547 92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEA-VEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG 169 (311)
Q Consensus 92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a-~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (311)
|...++..+-+..|.. +....++.+-+|.. +.+.+.++. ++.++.|+.+.-.+......+...|++++.++.....+
T Consensus 57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence 4444444444445643 23456676666543 445555553 34449999999888888899999999999998654333
Q ss_pred -cccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--
Q 021547 170 -WEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-- 243 (311)
Q Consensus 170 -~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-- 243 (311)
...|++.+++.++ +...+.+++++..-.|...+ ++++|+++|++||+..|+.++|+-=. ...+..+.
T Consensus 136 ~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~-----~~~~~~i~~a 208 (389)
T PF05889_consen 136 ELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQS-----SKCMHLIQQA 208 (389)
T ss_dssp EEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT------HHHHHHHHHH
T ss_pred eeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhH-----HHHHHHHHHH
Confidence 4556777777664 35567777777655555433 69999999999999999999999510 00000000
Q ss_pred -CCCC-eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 244 -SIVP-VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 244 -~~~~-~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
..++ .+++.|+-|.|-.| ..-+.|..+++ ..+..+...+
T Consensus 209 ~~~GRvda~vqS~dkNF~VP-vGgai~As~~~-------~~i~~vs~~Y 249 (389)
T PF05889_consen 209 WRVGRVDAFVQSTDKNFMVP-VGGAIMASFDP-------SGILAVSKEY 249 (389)
T ss_dssp HHHSTCSEEEEEHHHHHCEE-SSHEEEEESSH-------HHHHHHHHTS
T ss_pred HhcCCcceeeeecCCCEEec-CCCcEEEecCH-------HHHHHHHHHh
Confidence 0111 27899999998654 33344544443 3666666543
No 383
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.99 E-value=0.00046 Score=63.69 Aligned_cols=153 Identities=25% Similarity=0.373 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYES----FAKRNHIEVRHFD 163 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 163 (311)
++...+++.. | ++.-+.-+-.|++.+-++++.+.. +++ ++|+++...|+.+.. .+...|++++.++
T Consensus 114 e~Qs~i~eLT----G--mdvaNaSlyd~atA~aEa~~ma~r~~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 114 EYQSMICELT----G--MDVANASLYDGATAAAEAMLMAVRATKRKR-NKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHH----T--SSEE-SEBSSCCHHHHHHHHHHHHHHTT----EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHhh----C--CCccCCCCCChhHHHHHHHHHHHHhcccCC-cEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 3444455554 3 333344566788877777666653 233 599999999998876 4555788999888
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.... ...| ++++.++++.+||+ .|.+-+ +++|.++++++|.++++ .+-- +...+. .+...+.
T Consensus 187 ~~~~--~~~d--------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~l--~~Pge~G 248 (429)
T PF02347_consen 187 LDED--GTTD--------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGGL--KSPGEYG 248 (429)
T ss_dssp BBTT--CSB---------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCTC----GGGGT
T ss_pred cccc--CCcc--------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhCc--CChhhcC
Confidence 6532 2223 67899999999874 777766 99999999999999887 3322 222221 1112222
Q ss_pred CCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547 244 SIVPVITLGSISKRWIVP----GWRFGWLATND 272 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~ 272 (311)
. .|.+++ +|.||.| |--.|++.+.+
T Consensus 249 A---DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~ 277 (429)
T PF02347_consen 249 A---DIVVGE-HQTFGIPMGFGGPGAGFFAVRE 277 (429)
T ss_dssp ----SEEEEC-CTTTT---CCC-S--EEEEE-G
T ss_pred c---cEEeeC-CCCCcccCCCCCCCeeeEEEhh
Confidence 2 266655 8888776 56677777643
No 384
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.84 E-value=0.0022 Score=64.79 Aligned_cols=139 Identities=15% Similarity=0.198 Sum_probs=91.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC-----CCCcH----HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAP-----MFGLP----LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT- 131 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~----~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~- 131 (311)
..|+.+.+.+.+. .+.+..|.| ++|.- ++++.++++. +++..|.-+..++|.+.++++.+..
T Consensus 77 ~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~ 148 (939)
T TIGR00461 77 ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNV 148 (939)
T ss_pred cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHh
Confidence 3566666554432 112334544 23332 3445555555 3455677788888888887776643
Q ss_pred --cCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547 132 --RLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 132 --~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~ 205 (311)
+++ ++|++++..|+.+... ++..|++++.++ .++|++.+ ++.++++.+|+ -.|.+.+
T Consensus 149 ~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn-~~G~ied--- 211 (939)
T TIGR00461 149 SKKKA-NKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYPA-TDGSILD--- 211 (939)
T ss_pred hcCCC-CEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECCC-CCeEEec---
Confidence 234 7999999999887643 457888888763 34566555 46677777775 5788765
Q ss_pred HHHHHHHHHHhCCEEEEecc
Q 021547 206 LQKIAETARKLGILVIADEV 225 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~a 225 (311)
+++|+++++++|.+++++.-
T Consensus 212 ~~~i~~~~h~~gal~~~~ad 231 (939)
T TIGR00461 212 YKQLIDALHSHKSLVSVAAD 231 (939)
T ss_pred HHHHHHHHHHcCCEEEEEec
Confidence 99999999999999998443
No 385
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00086 Score=59.53 Aligned_cols=194 Identities=14% Similarity=0.106 Sum_probs=113.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHh----hcCCCCCCCC--CEEEeCChHHHHHHHHHHHhcCC
Q 021547 63 TAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLN----RDLPYKLSAD--DIYITLGCMEAVEIILTVITRLG 134 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~----~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l~~~g 134 (311)
++.++.+++...+.+-..-+|+.. .|-.++...+.-++. +-|+.+-..- ||..-+| +.|..++..++++|+
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG-SPANfavYtall~Ph 130 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG-SPANFAVYTALLKPH 130 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC-CchhhHHHhhhcCCC
Confidence 467788888777643111122210 111233333322222 2233322222 4444454 678999999999999
Q ss_pred CCEEEe---cCCCCcc--hHHHHHHcCcE-----EEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCH
Q 021547 135 AANILL---PRPGWPF--YESFAKRNHIE-----VRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 135 ~d~Vl~---~~p~~~~--~~~~~~~~g~~-----~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~ 203 (311)
++|.- |+..|-. |..-.+...+. --++.+++ .++-+|.|.||+.. .=++++++.-...++- .++
T Consensus 131 -~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R--~~D- 205 (477)
T KOG2467|consen 131 -ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLFRPKLIIAGTSAYSR--LID- 205 (477)
T ss_pred -CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhcCCcEEEeccccchh--hcc-
Confidence 99884 3334432 11111111111 11223322 45679999998844 3467776644434333 344
Q ss_pred HHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 204 QHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
..++-++|.+-|.+++.|.+|- +++-.+.-+.|+...| |+..+.+|+ +-|-|-|.|...
T Consensus 206 --YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyR 265 (477)
T KOG2467|consen 206 --YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYR 265 (477)
T ss_pred --HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEe
Confidence 6777788889999999999995 5666666667776544 899999997 678888888774
No 386
>PLN02672 methionine S-methyltransferase
Probab=97.71 E-value=0.00077 Score=68.98 Aligned_cols=219 Identities=9% Similarity=0.020 Sum_probs=139.0
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh------cCCCCEEEe
Q 021547 67 AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT------RLGAANILL 140 (311)
Q Consensus 67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~------~~g~d~Vl~ 140 (311)
+...+...++++.++.|.++.|...+|+.|+.|++..+++++++++|++.++-..|++.+++.+. +.+ .+
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 481 (1082)
T PLN02672 406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEH-LT--- 481 (1082)
T ss_pred HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhh-hh---
Confidence 34566667777778899999999999999999999999999999999999999999988887763 222 11
Q ss_pred cCCCCcchHHHHHHcC--------cEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547 141 PRPGWPFYESFAKRNH--------IEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 141 ~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~ 211 (311)
..-...+...+...+ -.+..+.-.. ..+.+.+++++ ++++++..-.. +-..+....+.|++
T Consensus 482 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 551 (1082)
T PLN02672 482 -RWLPKKWLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLN 551 (1082)
T ss_pred -ccCCHHHHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHH
Confidence 111112222222222 2233332111 11233444443 55555544333 22345556899999
Q ss_pred HHHHhCCEEEEeccccC-CccCCCCCCccccc---CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547 212 TARKLGILVIADEVYGH-LAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK 287 (311)
Q Consensus 212 l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~---~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~ 287 (311)
.+++.|.+++.|.+-.. +.-...+...+.-+ .......++.++-|+--.+.+-+++++.-+ + .+.+.+.
T Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~ 624 (1082)
T PLN02672 552 VTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISEN-E------AVLKALS 624 (1082)
T ss_pred HHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCc-H------HHHHHHH
Confidence 99999999999988653 32111111112111 112245788899999888999999998533 2 2555555
Q ss_pred hhhc-cccCCCchhHHHHHh
Q 021547 288 ACLG-VRSGPSTLIQVCEMF 306 (311)
Q Consensus 288 ~~~~-~~~~~~~~~q~~~~~ 306 (311)
.... ..+..+.++|+-..-
T Consensus 625 ~~~~~~~~~~~~~~~~~~~~ 644 (1082)
T PLN02672 625 KTGEVLEGRTAIISQFYYGC 644 (1082)
T ss_pred HHHHhhccchHHHHHHHHHH
Confidence 5544 335778888876543
No 387
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.68 E-value=0.00016 Score=62.44 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=129.4
Q ss_pred CCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCCCCE
Q 021547 62 RTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLGAAN 137 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~d~ 137 (311)
-++|.+.++....++.... .++-. .++.+-....... .. .-+-+++++++++|..++++... +.. |
T Consensus 61 hchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-lP---eLsvc~F~NSGSEANDLALRLAR~ftkhq-D- 130 (452)
T KOG1403|consen 61 HCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-LP---ELSVCFFVNSGSEANDLALRLARNFTKHQ-D- 130 (452)
T ss_pred cCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-CC---CceEEEEecCCchhhHHHHHHHHhhcccC-c-
Confidence 4678888888887764322 12222 3344333333322 11 23567899999999999888764 344 5
Q ss_pred EEecCCCCcchHH-HHHHcC-----------cEEEEeeccCC---CCcc-----------cCHHHHHhhcC----CCcc-
Q 021547 138 ILLPRPGWPFYES-FAKRNH-----------IEVRHFDLLPE---RGWE-----------VDLEAVEALAD----ENTA- 186 (311)
Q Consensus 138 Vl~~~p~~~~~~~-~~~~~g-----------~~~~~~~~~~~---~~~~-----------~d~~~l~~~l~----~~~~- 186 (311)
|++-+..|.+... ..+..- ..++.+-+.++ ..+. .=.+.+++.++ ...+
T Consensus 131 vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gv 210 (452)
T KOG1403|consen 131 VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGV 210 (452)
T ss_pred eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcH
Confidence 4444445543221 111111 11222211111 0000 11123333332 2211
Q ss_pred EEEEe-CCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 187 AIVII-NPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 187 ~i~i~-~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
+.++. +-+.=.|+++|+.. .++.++..+.+|-..|.||+.-+|..-|..++.+..++--++++ ++.|.. ..|.+
T Consensus 211 AAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIV---tmgKpm-GNGhP 286 (452)
T KOG1403|consen 211 AAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIV---TMGKPM-GNGHP 286 (452)
T ss_pred HHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchh---eecccC-CCCCe
Confidence 22333 33555677776665 78899999999999999999998876677777776665444444 778884 58999
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~ 309 (311)
++.++... ++.+.+..- +.-+.+.||.+.++..+.++
T Consensus 287 Va~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~ 326 (452)
T KOG1403|consen 287 VAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMR 326 (452)
T ss_pred eeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHH
Confidence 99988743 255655541 11246789999988877654
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.25 E-value=0.0098 Score=53.10 Aligned_cols=201 Identities=13% Similarity=0.066 Sum_probs=104.8
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-----CCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC-----YAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
+.+.||+.|- . ..|+++++..+..+....-.+ -++ +.-...+-+...+.+++.++++-+-+=+++-.|
T Consensus 4 ~~~~nFsaGP-a-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSAGP-A-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCCCc-c-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence 5678999994 2 345666666655543211101 111 222233444444455555555544433344566
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcch-HHHHHHcCcEEEEeecc-CCCCc--ccCHHHHHhhcCCCccEEEEeCCC
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFY-ESFAKRNHIEVRHFDLL-PERGW--EVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~--~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
+|..+.++...|+.++ ..-.+..-.|... ...++..+-.+...... ...++ -++++... +.++..-+.+|.-.
T Consensus 78 at~qf~~~p~nLl~~~-~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~Ne 154 (365)
T COG1932 78 ATGQFAMAPMNLLGKR-GTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNE 154 (365)
T ss_pred cHHHHHHHHHhhhccc-CceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCC
Confidence 6888999999998655 3212334444432 23444444322222111 11221 22222222 33333336666555
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
.-+|+.++ +...+.. +.++|.|.+..-+. ....+..++ ++..|.-|.+|..| ++.+|++.
T Consensus 155 Ti~Gv~v~--~~p~~~~-----~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~ 214 (365)
T COG1932 155 TISGVEVP--ELPDIGS-----DGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP 214 (365)
T ss_pred cccceEcc--CCCCCCC-----CceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH
Confidence 67788766 2222221 37889998877543 223444443 77789999999999 77777753
No 389
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.08 E-value=0.089 Score=48.08 Aligned_cols=142 Identities=25% Similarity=0.342 Sum_probs=88.8
Q ss_pred CCEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHHH----HcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 111 DDIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
-|--+--++|.+-++.+.+.. ++. .+++++..+|+.+...++ -.|.+++.++.. |.+++++....
T Consensus 138 ANASm~DeaTAaAEAm~ma~r~~k~k~-~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~ 209 (450)
T COG0403 138 ANASMLDEATAAAEAMLMAKRVTKKKR-NKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDG 209 (450)
T ss_pred ccchhhhhHHHHHHHHHHHHHhhcCcC-ceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhcccc
Confidence 344455667766666655553 234 899999999998765444 455666666542 77888888334
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe-ccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD-EVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP- 261 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D-~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~- 261 (311)
++-++++..|+ -.|.. .+++.++.+.+++++.++++= |.-+..... ++ ..+. -.|++++..-. |.|
T Consensus 210 ~~~gv~vQyP~-~~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~LL~--pP---Ge~G---ADIvvG~~Qrf-GvPm 277 (450)
T COG0403 210 DVFGVLVQYPN-TFGIV--EEDLRALIEAAHSAGALVIVAADPLALGLLK--PP---GEFG---ADIVVGSAQRF-GVPM 277 (450)
T ss_pred CeEEEEEecCC-CCCcc--chhHHHHHHHHhhcCCEEEEEechhHhhccC--Cc---cccC---CceEEecCccc-CCCc
Confidence 77888888887 45532 336999999999998776652 111110000 11 1222 23788776664 554
Q ss_pred ---cceeeEEEeeC
Q 021547 262 ---GWRFGWLATND 272 (311)
Q Consensus 262 ---G~r~G~i~~~~ 272 (311)
|-.+||..+.+
T Consensus 278 gfGGPhag~fA~~~ 291 (450)
T COG0403 278 GFGGPHAGYFAVKD 291 (450)
T ss_pred CCCCcceeeeeEhH
Confidence 56778877643
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.91 E-value=0.56 Score=47.86 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=61.1
Q ss_pred CEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 112 DIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
|--+-.++|.+-++++.+.. ++. .+|+++...|+.+...+ +..|++++. +++++.+.++
T Consensus 143 NASl~D~atA~aEA~~ma~~~~~~k~-~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~ 208 (954)
T PRK12566 143 NASLLDEATAAAEAMALAKRVAKSKS-NRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA 208 (954)
T ss_pred hhhhccchhHHHHHHHHHHHHhhcCC-CEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC
Confidence 44444566655554444442 234 68999999998876543 345555553 3344455567
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
+.++++.+|+ -.|.+.+ ++++.+++++.|.+++
T Consensus 209 ~~~v~vq~P~-~~G~i~d---~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 209 VFGALLQYPD-THGEIRD---LRPLIDQLHGQQALAC 241 (954)
T ss_pred EEEEEEECCC-CceEEcc---HHHHHHHHHHcCCEEE
Confidence 7888888886 4777754 9999999999988755
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=95.62 E-value=0.33 Score=42.62 Aligned_cols=208 Identities=13% Similarity=0.032 Sum_probs=129.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
..++|.|..++-++ .|..+...|.+.++.. ...-|+.. .+.......++... +...++|.+
T Consensus 65 d~~~iYlcGNSLGL-----mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav 133 (465)
T KOG3846|consen 65 DKPVIYLCGNSLGL-----MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV 133 (465)
T ss_pred CCCeEEEecccccc-----CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence 56778887776432 3456666666555421 01112211 12344555555555 457789999
Q ss_pred eCChHHHHHHHHHHHhcCC--CCEEEecCCCCcc----hHHHHHHcCcEEE----EeeccCCCCcccCHHHHHhhcCC--
Q 021547 116 TLGCMEAVEIILTVITRLG--AANILLPRPGWPF----YESFAKRNHIEVR----HFDLLPERGWEVDLEAVEALADE-- 183 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g--~d~Vl~~~p~~~~----~~~~~~~~g~~~~----~~~~~~~~~~~~d~~~l~~~l~~-- 183 (311)
.++-|-.+..++.++.+|. +-+||+..-.|++ +...++..|+.+. .+.. .+..-.+..+++.+.+..
T Consensus 134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP-REGEetlRteDILd~IEkng 212 (465)
T KOG3846|consen 134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP-REGEETLRTEDILDTIEKNG 212 (465)
T ss_pred HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc-cccccchhHHHHHHHHHhcC
Confidence 9999999999998887653 1578888777663 4567777777532 2322 123334566666665543
Q ss_pred -CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 184 -NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 184 -~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
...+++++..+.-||+.++ +.+|-..-+..|+++=.|-+|+. |.-+..+.. -+..+-++..-|......
T Consensus 213 DeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHd---WgVDFACWCSYKYlnaGa 282 (465)
T KOG3846|consen 213 DEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHD---WGVDFACWCSYKYLNAGA 282 (465)
T ss_pred CeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEee---cCCceEEEeeecccccCC
Confidence 4555677778999999999 88887666667999999999985 111222222 223377888888754433
Q ss_pred ceeeEEEeeCC
Q 021547 263 WRFGWLATNDP 273 (311)
Q Consensus 263 ~r~G~i~~~~~ 273 (311)
-.+|-+.+++.
T Consensus 283 GgIgGlFvHek 293 (465)
T KOG3846|consen 283 GGIGGLFVHEK 293 (465)
T ss_pred Cccceeeeehh
Confidence 45666666554
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.39 E-value=0.29 Score=47.21 Aligned_cols=134 Identities=15% Similarity=0.115 Sum_probs=89.8
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe-CChHHHHHH---HHHHH-hcCC--C-CEEEecCCCCcchHHHHHHcCc
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYIT-LGCMEAVEI---ILTVI-TRLG--A-ANILLPRPGWPFYESFAKRNHI 157 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t-~g~~~a~~~---~~~~l-~~~g--~-d~Vl~~~p~~~~~~~~~~~~g~ 157 (311)
.+|+.++-..+..+|...-| -|.+.+- +++.++-++ ++++. ..+| . ...|+|...|..-...+...|.
T Consensus 577 aqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred HhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 45777777778777765333 3455553 222333333 23333 2333 1 3567888888888889999999
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
+++++..+ .++.+|..+|++...+ +-.++.++.|.. .|+. .+.+++++++.++||--|..|.+--.
T Consensus 653 kvvpV~~~--~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 653 KVVPVGCD--ANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred EEEEeecc--CCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCcc
Confidence 99999875 4567999999875543 455667766643 2332 34599999999999999999988654
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.13 E-value=0.15 Score=43.69 Aligned_cols=178 Identities=17% Similarity=0.131 Sum_probs=99.1
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC-cccCHHHHHh
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVEA 179 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~ 179 (311)
..|+..-+..+++---....+.+.+..+. +|.+..|+-..-.-.+.....-..|++++.+....+.+ ...|++.+++
T Consensus 69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~ 148 (432)
T KOG3843|consen 69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA 148 (432)
T ss_pred HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence 34555555555543222234555566664 34435666555555555566677899888876544333 4557888888
Q ss_pred hcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCccc
Q 021547 180 LADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKR 257 (311)
Q Consensus 180 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~ 257 (311)
.+.+ ....++..+.....=..-+++.+++|+.+|..|++.=|+.++|+.-.- +...-+..-...++ ..++.|+-|.
T Consensus 149 ~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqse--e~i~~iaa~~~~grida~vqsldkn 226 (432)
T KOG3843|consen 149 IIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE--ECIHKIAAAAECGRIDAFVQSLDKN 226 (432)
T ss_pred HHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchH--HHHHHHHHHhhhccHHHHHHHhhhc
Confidence 7654 333232222222222223556899999999999999999999985221 01111111112222 2677899999
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
|-.|- -|.+++.=+ ...++.+.+.+
T Consensus 227 f~vpv--ggaiia~fk------~n~iq~iak~y 251 (432)
T KOG3843|consen 227 FMVPV--GGAIIAAFK------DNFIQEIAKMY 251 (432)
T ss_pred ceeec--chhHhhHhH------HHHHHHHHHhC
Confidence 86651 144444222 13566655553
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.43 E-value=1.6 Score=38.05 Aligned_cols=199 Identities=12% Similarity=0.065 Sum_probs=106.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
+..++||+-|- . ..|..|...+++-+-... ....++ +.....+.+.-...+.+.++++-+-+-+++-.
T Consensus 5 ~~~vvnFaaGP-A-----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QG 78 (370)
T KOG2790|consen 5 PERVVNFAAGP-A-----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQG 78 (370)
T ss_pred ccceeecCCCc-c-----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeC
Confidence 67899999994 2 335556555555443110 001111 12223333333333433344444444456667
Q ss_pred ChHHHHHHHHHHHh--cCC--CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcCCCccEEEEeC
Q 021547 118 GCMEAVEIILTVIT--RLG--AANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 118 g~~~a~~~~~~~l~--~~g--~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
|+|.-+.++...|+ +.| +|.|++-.+.-..+.++-+......+..+..... +--+|.+.++. +++.+.+++|.
T Consensus 79 GGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa 156 (370)
T KOG2790|consen 79 GGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA 156 (370)
T ss_pred CCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence 77888888777776 344 3677766665555555444333334433332211 11234444433 45566777776
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF 265 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 265 (311)
--.-.|+-++. +. +-..++..+|.|.+.-.+. .+..+..+. +++.+.-|.+|.+|+-+
T Consensus 157 NETVHGVEf~~--~P----~~~~~~~vlVaDmSSnflS----rpvDvsk~g-----vi~aGAQKN~G~aG~Tv 214 (370)
T KOG2790|consen 157 NETVHGVEFDF--IP----VNDPKGAVLVADMSSNFLS----RPVDVSKFG-----VIFAGAQKNVGPAGVTV 214 (370)
T ss_pred CceeeceecCC--CC----CCCCCCceEEEecccchhc----CCccchhcc-----eEEeccccccCccccEE
Confidence 54555665541 11 1124588889998876543 223333333 78889999999998543
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=94.15 E-value=0.17 Score=45.26 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=49.4
Q ss_pred ccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc--ccCCCCCeEEEecCcccCCC
Q 021547 185 TAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG--VFGSIVPVITLGSISKRWIV 260 (311)
Q Consensus 185 ~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~--~~~~~~~~i~i~s~sK~~~~ 260 (311)
+.+.+|.-| +...|. .-+++..++|-+++++|++.+|+||++-+..-+|+ ++.-. .++...++| +|||-|-.
T Consensus 271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~WaHehw~l~~PpD~v---TFSKK~q~ 346 (484)
T KOG1405|consen 271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWAHEHWNLDSPPDVV---TFSKKFQT 346 (484)
T ss_pred CeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eeeehhcCCCCCccce---ehhhhhhc
Confidence 445555555 555554 56889999999999999999999999987554442 22212 222333345 89999754
Q ss_pred Cc
Q 021547 261 PG 262 (311)
Q Consensus 261 ~G 262 (311)
.|
T Consensus 347 gG 348 (484)
T KOG1405|consen 347 GG 348 (484)
T ss_pred Cc
Confidence 43
No 396
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=87.68 E-value=8.1 Score=32.53 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=66.4
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCC-------------EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAA-------------NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d-------------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 178 (311)
-+.+-+||-.+..++..++. .|.+ ......|...-....++..|+.++.....- ...-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence 36778889888888888773 3412 222222222233567888899988876542 1223566666
Q ss_pred hhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 179 ALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 179 ~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
++++. +..+|+ +|.+.+..++.++-++|++.|+.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 66653 444555 7999999999999999999998743
No 397
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=85.65 E-value=17 Score=30.34 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=55.6
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
+....|++..||..|...+ ..|++.| ..|.+.+|....-.......| ++..+.-. ...+++. + .-
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~g-a~VtVvsp~~~~~l~~l~~~~-~i~~~~~~------~~~~dl~-----~-~~ 71 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAG-AQLRVIAEELESELTLLAEQG-GITWLARC------FDADILE-----G-AF 71 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCC-CEEEEEcCCCCHHHHHHHHcC-CEEEEeCC------CCHHHhC-----C-cE
Confidence 4556788888888776665 5555778 667777776654333233333 34443321 1223321 2 34
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEeccc
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILV-IADEVY 226 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l-i~D~ay 226 (311)
+++..++++. .-..+...|++.++++ ++|+.-
T Consensus 72 lVi~at~d~~-------ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 72 LVIAATDDEE-------LNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred EEEECCCCHH-------HHHHHHHHHHHcCCEEEECCCcc
Confidence 4555555542 2478999999999888 345443
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=85.31 E-value=12 Score=31.50 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=53.8
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..++.+|.+.+....++.++.-......++..|.+++..+.. |.+.|.++++ +...++++.+... .-..
T Consensus 12 ~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~~~~~---~~~~ 80 (233)
T PF05368_consen 12 RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVTPPSH---PSEL 80 (233)
T ss_dssp HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEESSCSC---CCHH
T ss_pred HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeecCcch---hhhh
Confidence 345555555663444445555333445567789988766542 7889998888 4555555655332 1234
Q ss_pred HHHHHHHHHHHHhCCEEEE
Q 021547 204 QHLQKIAETARKLGILVIA 222 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~ 222 (311)
+.-..+++.|++.|+-.++
T Consensus 81 ~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhHHHhhhccccceEE
Confidence 5578899999999987776
No 399
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=82.53 E-value=32 Score=29.96 Aligned_cols=96 Identities=17% Similarity=0.298 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
+++..+.-+.+.|.|.|++++--+. .+...++..|+..+.+=. +. .+.+.++...+....-+++.+....||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 5566677777888899999986554 345677888888776632 21 256777776665555666656667788
Q ss_pred cCC-CHHHHHHHHHHHHHh-CCEEEE
Q 021547 199 NVL-TYQHLQKIAETARKL-GILVIA 222 (311)
Q Consensus 199 ~~~-~~~~l~~l~~l~~~~-~~~li~ 222 (311)
..- -.+++.++++.++++ +..+.+
T Consensus 182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 182 LKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCccccHHHHHHHHHHHHhcCCCEEE
Confidence 742 235578888888765 666665
No 400
>PLN02591 tryptophan synthase
Probab=82.22 E-value=32 Score=29.73 Aligned_cols=157 Identities=16% Similarity=0.217 Sum_probs=97.6
Q ss_pred CCCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh-
Q 021547 43 DPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC- 119 (311)
Q Consensus 43 ~~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~- 119 (311)
.+-++|-++.. ||. .--|.++++..++++.+. .+..+-+.+.+.- +.... .-+++|--.
T Consensus 28 ~Gad~iElGiPfSDP~-----aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~~r-~~~~~----p~ilm~Y~N~ 89 (250)
T PLN02591 28 CGADVIELGVPYSDPL-----ADGPVIQAAATRALEKGT--------TLDSVISMLKEVA-PQLSC----PIVLFTYYNP 89 (250)
T ss_pred CCCCEEEECCCCCCCc-----ccCHHHHHHHHHHHHcCC--------CHHHHHHHHHHHh-cCCCC----CEEEEecccH
Confidence 37899998876 443 234788888888887542 2233344443322 21111 113443222
Q ss_pred --HHHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCC
Q 021547 120 --MEAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 120 --~~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
.-+++..+..+.+.|.|.||+++--+. .+...++..|+..+.+=. + ..+.+.+++........+++.+-.
T Consensus 90 i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~-P----tt~~~ri~~ia~~~~gFIY~Vs~~ 164 (250)
T PLN02591 90 ILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT-P----TTPTERMKAIAEASEGFVYLVSST 164 (250)
T ss_pred HHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-C----CCCHHHHHHHHHhCCCcEEEeeCC
Confidence 236677777788888899999987765 456777888988887632 2 135566777665555666665656
Q ss_pred CCCccCCC-HHHHHHHHHHHHHh-CCEEEE
Q 021547 195 NPCGNVLT-YQHLQKIAETARKL-GILVIA 222 (311)
Q Consensus 195 nptG~~~~-~~~l~~l~~l~~~~-~~~li~ 222 (311)
.-||..-. .++++++++.++++ ++.+++
T Consensus 165 GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 165 GVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 67776433 46688877777775 666665
No 401
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=80.73 E-value=51 Score=32.60 Aligned_cols=76 Identities=20% Similarity=0.278 Sum_probs=46.5
Q ss_pred hcCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547 131 TRLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206 (311)
Q Consensus 131 ~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l 206 (311)
..++ .+.++...+|+.....++- .|++++.. |.++.. ...++..++++..|.. -|.+.+ .
T Consensus 202 ~~kr-kk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~-~s~~~v~gvlvQYP~t-~G~i~d---~ 265 (1001)
T KOG2040|consen 202 INKR-KKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEAD-YSSKDVSGVLVQYPDT-EGSVLD---F 265 (1001)
T ss_pred hccc-ceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhh-ccccceeEEEEEcCCC-CCcccC---H
Confidence 3466 7899999999987665542 22222221 222211 1233566677777654 566677 7
Q ss_pred HHHHHHHHHhCCEEEE
Q 021547 207 QKIAETARKLGILVIA 222 (311)
Q Consensus 207 ~~l~~l~~~~~~~li~ 222 (311)
.++++.+++.+..+++
T Consensus 266 ~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 266 DELVELAHANGSLVVM 281 (1001)
T ss_pred HHHHHHhhccCceEEE
Confidence 8888888888877665
No 402
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=78.22 E-value=45 Score=28.99 Aligned_cols=156 Identities=15% Similarity=0.198 Sum_probs=90.6
Q ss_pred CCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-
Q 021547 44 PRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM- 120 (311)
Q Consensus 44 ~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~- 120 (311)
+-+++-++.. +|. .--|.++++..++++.+. ....+-+.+.+.-.+.. +..-+++|--..
T Consensus 37 GaD~iEiGiPfSDP~-----ADGpvIq~A~~rAL~~G~--------~~~~~~~~~~~ir~~~~----~~pivlm~Y~N~i 99 (259)
T PF00290_consen 37 GADIIEIGIPFSDPV-----ADGPVIQKASQRALKNGF--------TLEKIFELVKEIRKKEP----DIPIVLMTYYNPI 99 (259)
T ss_dssp TBSSEEEE--SSSCT-----TSSHHHHHHHHHHHHTT----------HHHHHHHHHHHHHHCT----SSEEEEEE-HHHH
T ss_pred CCCEEEECCCCCCCC-----CCCHHHHHHHHHHHHCCC--------CHHHHHHHHHHHhccCC----CCCEEEEeeccHH
Confidence 7788888766 443 234778888888887432 23334443433332211 122233332221
Q ss_pred --HHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547 121 --EAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN 195 (311)
Q Consensus 121 --~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n 195 (311)
-+++..+..+.+.|.|.+++++--+. .+...++..|+..+.+=. + ..+.+.+++..+....-+++.+-..
T Consensus 100 ~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~-p----~t~~~Ri~~i~~~a~gFiY~vs~~G 174 (259)
T PF00290_consen 100 FQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVA-P----TTPEERIKKIAKQASGFIYLVSRMG 174 (259)
T ss_dssp HHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEE-T----TS-HHHHHHHHHH-SSEEEEESSSS
T ss_pred hccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEEC-C----CCCHHHHHHHHHhCCcEEEeeccCC
Confidence 23455566666678789999986664 456677889988777632 2 1366777776665666777777777
Q ss_pred CCccCCC-HHHHHHHHHHHHHh-CCEEE
Q 021547 196 PCGNVLT-YQHLQKIAETARKL-GILVI 221 (311)
Q Consensus 196 ptG~~~~-~~~l~~l~~l~~~~-~~~li 221 (311)
.||...+ ..++.++++.++++ ++.++
T Consensus 175 vTG~~~~~~~~l~~~i~~ik~~~~~Pv~ 202 (259)
T PF00290_consen 175 VTGSRTELPDELKEFIKRIKKHTDLPVA 202 (259)
T ss_dssp SSSTTSSCHHHHHHHHHHHHHTTSS-EE
T ss_pred CCCCcccchHHHHHHHHHHHhhcCcceE
Confidence 8998653 46688888888876 34444
No 403
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=77.50 E-value=50 Score=31.28 Aligned_cols=129 Identities=15% Similarity=0.130 Sum_probs=83.1
Q ss_pred CCCCcHHHHHHHHHHHhhcCCC-----------CCCCCCEEEeCChHHHHHHHHHHHhcCCC-CEEE-ec-CCCCcch--
Q 021547 85 PMFGLPLARRAVAEYLNRDLPY-----------KLSADDIYITLGCMEAVEIILTVITRLGA-ANIL-LP-RPGWPFY-- 148 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~-----------~~~~~~v~~t~g~~~a~~~~~~~l~~~g~-d~Vl-~~-~p~~~~~-- 148 (311)
...+-.+|.+.|-+|+..+..+ .+...++++|-|.+..++.++.--.+-|. -+|+ +. .|.+.+-
T Consensus 323 e~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~ 402 (556)
T KOG1467|consen 323 ESEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKL 402 (556)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHH
Confidence 3455667778887777765442 34557899999999888876666544331 2444 33 5666553
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
...+...|+++.++-+.. ...+ +.+-++.++=++.--.-|.+|++.--..++=.++.||+.||+=
T Consensus 403 lr~Lv~~GinctYv~I~a-------~syi---m~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 403 LRRLVDRGINCTYVLINA-------ASYI---MLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred HHHHHHcCCCeEEEEehh-------HHHH---HHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 456667888888876521 1111 1234555555565556688888777777888889999988764
No 404
>PRK10595 SOS cell division inhibitor; Provisional
Probab=77.48 E-value=36 Score=27.38 Aligned_cols=83 Identities=12% Similarity=0.072 Sum_probs=55.6
Q ss_pred cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547 132 RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 132 ~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 211 (311)
..+ .-|+...|-+..+..++...|+....+=.....+-.-.+...|++++.+....+++...+ .++.+++++|--
T Consensus 54 ~~~-rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~----~l~~~~~RRLQl 128 (164)
T PRK10595 54 QQS-RWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPD----ELTEEEHARLVD 128 (164)
T ss_pred ccC-ceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcc----cCCHHHHHHHHH
Confidence 345 577778888888999999999875554433222222245667888888877777776421 246778888887
Q ss_pred HHHHhCCE
Q 021547 212 TARKLGIL 219 (311)
Q Consensus 212 l~~~~~~~ 219 (311)
.|++-+.+
T Consensus 129 AAe~g~~l 136 (164)
T PRK10595 129 AAQEGNAM 136 (164)
T ss_pred HHHhCCCE
Confidence 77765544
No 405
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=76.24 E-value=48 Score=29.37 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=54.9
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh---h
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA---L 180 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~---~ 180 (311)
.+..+-|++|.||.+.=..+..-+.+.| .++++.+ ..... +...++..| ++..+..+-. +.|++.+ .
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg-~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~ 107 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRG-AKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKK 107 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhC-CeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHH
Confidence 4566677888777766667777777888 6665443 33332 233334335 4444443321 3444444 3
Q ss_pred cCC--CccEEEEeCCC---CCCccCCCHHHHHHHHHH
Q 021547 181 ADE--NTAAIVIINPC---NPCGNVLTYQHLQKIAET 212 (311)
Q Consensus 181 l~~--~~~~i~i~~p~---nptG~~~~~~~l~~l~~l 212 (311)
+++ +..-++++|.. .-...-.+++++++..++
T Consensus 108 Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 108 VKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 332 45556777652 333445788888886553
No 406
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=76.19 E-value=7.8 Score=34.99 Aligned_cols=70 Identities=17% Similarity=0.299 Sum_probs=47.6
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.......+++...+.+.+..+|.+..+.+.++-..... .....+.|..++.+++++|++.|+++||-||-
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 45666677888888877666776665555443221111 11234567789999999999999999988774
No 407
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=76.03 E-value=38 Score=28.42 Aligned_cols=91 Identities=20% Similarity=0.310 Sum_probs=54.5
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCC-cchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT 185 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 185 (311)
.+....|++..||..|..-+ ..|++.| ..|.+..|.. +.+..+.+..++.... ...+.+.+.. .
T Consensus 9 ~l~~k~VlvvGgG~va~rKa-~~ll~~g-a~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~~~-----~ 73 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKA-RLLLKAG-ADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDLDD-----A 73 (210)
T ss_pred EcCCCEEEEECCCHHHHHHH-HHHHhcC-CEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhhcC-----c
Confidence 34556788888888777754 5555788 7888888888 4455565555522221 1123333322 2
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
-++++++ +++. .=+++.+.|+++++++
T Consensus 74 ~lviaAt-~d~~-------ln~~i~~~a~~~~i~v 100 (210)
T COG1648 74 FLVIAAT-DDEE-------LNERIAKAARERRILV 100 (210)
T ss_pred eEEEEeC-CCHH-------HHHHHHHHHHHhCCce
Confidence 3333333 3332 4688999999988665
No 408
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=75.53 E-value=41 Score=27.11 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=55.3
Q ss_pred cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC-CCCCCccCCCHHHHHHHH
Q 021547 132 RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 132 ~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~ 210 (311)
..+ .-|+...|-+..+..+....|+....+-......-.-.+...|++++..+...+++. |+. ++.+++++|-
T Consensus 58 ~~~-Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRRLq 131 (168)
T TIGR00623 58 QQS-RWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAKLV 131 (168)
T ss_pred ccC-ceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHHHH
Confidence 345 566667777778899999999876555332212222356778889998888888887 422 5677888887
Q ss_pred HHHHHhCCE
Q 021547 211 ETARKLGIL 219 (311)
Q Consensus 211 ~l~~~~~~~ 219 (311)
-.++.-+.+
T Consensus 132 lAA~~G~al 140 (168)
T TIGR00623 132 RAAEEGNAM 140 (168)
T ss_pred HHHHhCCCe
Confidence 777665544
No 409
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=74.82 E-value=58 Score=28.97 Aligned_cols=172 Identities=19% Similarity=0.184 Sum_probs=92.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCC--EEEec--CCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAA--NILLP--RPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d--~Vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
...++++|.|.+.++..++....+.| . +|++. .|.+.+. ...++..|+++..+. | ...-..++
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~-k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~~~ 186 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRG-KRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAFMS 186 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcC-CceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHHHH
Confidence 45689999999999988888887777 4 55553 6888765 356777887777663 2 11222233
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE-eccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA-DEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~-D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
.-.+.++=...----|..+++-----|+-.|+++++++++ =++|-. .+...++ ....+..++.+......
T Consensus 187 ~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyKf--------~p~~~~~-~~~~~~~~~~~e~~~~~ 257 (301)
T COG1184 187 RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYKF--------VPKTLLD-TLVEIELRDPLEVAREE 257 (301)
T ss_pred hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeecc--------cccccCC-CcceeeccChhhccccC
Confidence 2223332222223334455544556788888998887665 334432 1111111 11234445555542222
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHH
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCE 304 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 304 (311)
+ -+++-+.++..+...+++++.+-.-.+. .++...+..+
T Consensus 258 ~--~~~~~v~Np~fD~TP~~~Id~iITe~G~--~pp~~~~~i~ 296 (301)
T COG1184 258 P--LGNLKVRNPAFDVTPPEYIDAIITELGI--IPPSSIYRIL 296 (301)
T ss_pred c--ccCccccccccCCCcHHHhheeeecCCC--CCchhHHHHH
Confidence 2 2244555566555556677665544443 3444444443
No 410
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=74.07 E-value=35 Score=27.23 Aligned_cols=94 Identities=18% Similarity=0.143 Sum_probs=54.3
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
|+++.++...=..++..|++.| -+|....-.-..... ..+++++..++ .|.+.+.+++. +...++.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh-hcchhhhhh
Confidence 3444433333345667777777 555544333322222 55566665543 37788888887 455555555
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.++. +.+..+.+++.|++.++.-++
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~~~~v 94 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGVKRVV 94 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTSSEEE
T ss_pred hhhcc----cccccccccccccccccccce
Confidence 33333 266688999999998874333
No 411
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=72.23 E-value=9.6 Score=33.94 Aligned_cols=69 Identities=26% Similarity=0.395 Sum_probs=45.9
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.......+.+...+.+.+..+|.+....+.++-..... ....+.|..++.+++++|++.|+++|+-||-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~-----~~~~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ-----INPRSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc-----ccCCCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 45566677888888777666676665544443221110 1123455689999999999999999988774
No 412
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=70.63 E-value=57 Score=29.17 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=38.5
Q ss_pred CcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 169 GWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 169 ~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+..++.++++..++. +...+++ +-+=|.|. +.+...+|+++|++.|..++.|..-..+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g~--~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVL-SGSLPPGV--PPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCCC--CHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 345566666554321 2233333 33445544 6678999999999999999999988765
No 413
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=70.46 E-value=9 Score=34.89 Aligned_cols=65 Identities=22% Similarity=0.300 Sum_probs=45.3
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.......+++...+.+.+..+|.+....+.++-... ....|..++.+++++|++.|+++||-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 455566777888887776666766655444432211 12346679999999999999999988774
No 414
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=69.35 E-value=43 Score=30.24 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=72.7
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEec-CCCCc-----chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLP-RPGWP-----FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
++|=|..+.-+...+.+.| -+|++. .-+|- ....+.++.|..++.-+ .-.+.-.+-.+.++.+...+...++
T Consensus 149 G~GKTTTIaKLA~~l~~~g-~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~-~G~DpAaVafDAi~~Akar~~Dvvl 226 (340)
T COG0552 149 GVGKTTTIAKLAKYLKQQG-KSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK-EGADPAAVAFDAIQAAKARGIDVVL 226 (340)
T ss_pred CCchHhHHHHHHHHHHHCC-CeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC-CCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 3455778888888898999 666665 44553 24567888888887643 1122223445677777777777777
Q ss_pred EeCC---CCCCccCCCHHHHHHHHHHHHHhC------CEEEEeccccC
Q 021547 190 IINP---CNPCGNVLTYQHLQKIAETARKLG------ILVIADEVYGH 228 (311)
Q Consensus 190 i~~p---~nptG~~~~~~~l~~l~~l~~~~~------~~li~D~ay~~ 228 (311)
+-+. ||-+.. .++|++|.+++++.. ++++.|..-+.
T Consensus 227 iDTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 227 IDTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred EeCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 7765 455533 357999999999765 66777988764
No 415
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=69.10 E-value=73 Score=28.93 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=60.5
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEE--ecCCCCc------chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANIL--LPRPGWP------FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl--~~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
-+-++..+||-.+..++..+...-| ..++ ..++.|. .....++.+|+....+.+ +.+.+....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~g-l~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLG-LNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhC-CceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHH
Confidence 3456667888777766543333345 4443 4456654 345677778988877764 333333322
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC
Q 021547 182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232 (311)
Q Consensus 182 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~ 232 (311)
....+ +..+|... ........+.++|.++|+.+|+..-...-.|+
T Consensus 131 ~~~~~-----~~~~pc~~-c~~~~~~~l~~~A~~~gi~~Il~G~~~dE~fg 175 (343)
T TIGR03573 131 RAYFK-----KVGDPEWP-QDHAIFASVYQVALKFNIPLIIWGENIAEEYG 175 (343)
T ss_pred HHHHh-----ccCCCchh-hhhHHHHHHHHHHHHhCCCEEEeCCCHHHhcC
Confidence 11111 12233322 12234678889999999999988776654443
No 416
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=68.84 E-value=44 Score=24.58 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHHHHhCCEEEE
Q 021547 202 TYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.++.++|.++++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 677888888888888877765
No 417
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=68.69 E-value=78 Score=27.43 Aligned_cols=158 Identities=13% Similarity=0.174 Sum_probs=85.1
Q ss_pred CCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh--
Q 021547 44 PRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC-- 119 (311)
Q Consensus 44 ~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~-- 119 (311)
+-++|-++.. +|. .--|.++++..++++.+. .+..+-+.+.+.-+.....++ . ++...+.
T Consensus 37 Gad~iElGiPfsDP~-----aDGpvIq~a~~~al~~G~--------~~~~~~~~v~~ir~~~~~~pl--v-~m~Y~Npi~ 100 (256)
T TIGR00262 37 GADALELGVPFSDPL-----ADGPTIQAADLRALRAGM--------TPEKCFELLKKVRQKHPNIPI--G-LLTYYNLIF 100 (256)
T ss_pred CCCEEEECCCCCCCC-----CcCHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHhcCCCCCE--E-EEEeccHHh
Confidence 7788888765 443 234677777777776432 122233333332211112221 2 2222222
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np 196 (311)
.-+++..+..+.+.|.|.|++++-.+. .+...++..|+....+= .+ ..+.+.++.........+++.+.+.-
T Consensus 101 ~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv-~P----~T~~eri~~i~~~~~gfiy~vs~~G~ 175 (256)
T TIGR00262 101 RKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLV-AP----NADDERLKQIAEKSQGFVYLVSRAGV 175 (256)
T ss_pred hhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEE-CC----CCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 225566677777888888998875553 34566777888766431 12 13566777666654445655555567
Q ss_pred CccC--CCHHHHHHHHHHHHHh-CCEEEEe
Q 021547 197 CGNV--LTYQHLQKIAETARKL-GILVIAD 223 (311)
Q Consensus 197 tG~~--~~~~~l~~l~~l~~~~-~~~li~D 223 (311)
||.. ++.+ +.+.++.++++ +..|++|
T Consensus 176 TG~~~~~~~~-~~~~i~~lr~~~~~pi~vg 204 (256)
T TIGR00262 176 TGARNRAASA-LNELVKRLKAYSAKPVLVG 204 (256)
T ss_pred CCCcccCChh-HHHHHHHHHhhcCCCEEEe
Confidence 7774 4444 45555555543 5555443
No 418
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=68.00 E-value=15 Score=32.93 Aligned_cols=63 Identities=19% Similarity=0.330 Sum_probs=42.8
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.......++++-.+.+.++.+|.+....+.++-... ..|..++.+++++|++.|+++||-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 455666777877777766666666544433321111 135569999999999999999987773
No 419
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=66.07 E-value=57 Score=27.04 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=27.8
Q ss_pred HHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 176 ~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
.++...+++..+++++...+. +++.+.++.++++|+.+|.=
T Consensus 102 ql~~~~~~gDvli~iS~SG~s-------~~v~~a~~~Ak~~G~~vI~I 142 (196)
T PRK10886 102 QVRALGHAGDVLLAISTRGNS-------RDIVKAVEAAVTRDMTIVAL 142 (196)
T ss_pred HHHHcCCCCCEEEEEeCCCCC-------HHHHHHHHHHHHCCCEEEEE
Confidence 344445566666666664331 24999999999999888763
No 420
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=65.72 E-value=72 Score=27.08 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=63.7
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEe----cC---------CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILL----PR---------PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~----~~---------p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
++.-+||-.+..++..++.. - +.+.+ +. +...-....++..|+.++.++.... ..--.+++.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~-~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-H-EVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-C-eeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHH
Confidence 45678999999988888876 4 43332 11 1111234678889998877654221 1223455555
Q ss_pred hcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 180 LADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 180 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
.+++ +..+++ +|.+.+..++..+-++|.+.|+..+
T Consensus 80 ~l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 80 ILHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 5543 444554 7999999999999999999987643
No 421
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=65.47 E-value=89 Score=27.70 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCCcchHHHHHH--cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 143 PGWPFYESFAKR--NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 143 p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
|+|+...+..+. ..+-++.+|. ..-++.++++...+.+.+++.+...+ .++-++|.++++++|+.+
T Consensus 52 ~~y~sv~dlp~~~~~DlAvi~vp~------~~v~~~l~e~~~~gvk~avI~s~Gf~------~~~~~~l~~~a~~~girv 119 (291)
T PRK05678 52 PVFNTVAEAVEATGANASVIYVPP------PFAADAILEAIDAGIDLIVCITEGIP------VLDMLEVKAYLERKKTRL 119 (291)
T ss_pred eccCCHHHHhhccCCCEEEEEcCH------HHHHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCEE
Confidence 455555555553 3444555543 13467778877888888877765533 344468999999999999
Q ss_pred EEeccccCCc
Q 021547 221 IADEVYGHLA 230 (311)
Q Consensus 221 i~D~ay~~~~ 230 (311)
+==++.+.+.
T Consensus 120 lGPNc~Gi~~ 129 (291)
T PRK05678 120 IGPNCPGIIT 129 (291)
T ss_pred ECCCCCcccc
Confidence 9777776544
No 422
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=65.15 E-value=22 Score=27.04 Aligned_cols=48 Identities=17% Similarity=0.285 Sum_probs=38.3
Q ss_pred cccCHHHHHhhcCCCccEEEEe--CC---CCCCccCCCHHHHHHHHHHHHHhC
Q 021547 170 WEVDLEAVEALADENTAAIVII--NP---CNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 170 ~~~d~~~l~~~l~~~~~~i~i~--~p---~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
+.++++.+.+++.....+|++. .| ++..|.......++.+.++..+.|
T Consensus 38 Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 38 GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 4789999999999888888774 33 568999888888888888777654
No 423
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=65.11 E-value=86 Score=26.59 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=62.4
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEec--CC-----------CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLP--RP-----------GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~--~p-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
++..+||-.+..++..++.+ . +.+.+. .| ...-....++..|+..+.+..... ..-..+++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~-~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-H-EVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-C-eeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHH
Confidence 45668888888888877755 4 433221 11 112335688889998877664321 1223344444
Q ss_pred hcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 180 LADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 180 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
.+++ +..+++ +|.+.+..+...+-++|.+.|+..+
T Consensus 80 ~l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 80 QLGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 4433 455555 7999999999999999999988743
No 424
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=62.46 E-value=1.1e+02 Score=26.82 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhcCCCCEEEecC-CCCc-----chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 120 MEAVEIILTVITRLGAANILLPR-PGWP-----FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~-p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
|.....+...+.+.| .+|++.+ -.|. ....+++..|..+...... .+......+.++.....+...+++-+|
T Consensus 86 TTt~akLA~~l~~~g-~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~~-~dp~~~~~~~l~~~~~~~~D~ViIDT~ 163 (272)
T TIGR00064 86 TTTIAKLANKLKKQG-KSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKEG-ADPAAVAFDAIQKAKARNIDVVLIDTA 163 (272)
T ss_pred HHHHHHHHHHHHhcC-CEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCCC-CCHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 444444445566677 6665443 2232 2344567777554433211 000011123333444455677788777
Q ss_pred CCCCccCCCHHHHHHHHHHHH------HhCCEEEEecccc
Q 021547 194 CNPCGNVLTYQHLQKIAETAR------KLGILVIADEVYG 227 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~------~~~~~li~D~ay~ 227 (311)
....-...-.++++++.+.+. ..++++++|...+
T Consensus 164 G~~~~d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~ 203 (272)
T TIGR00064 164 GRLQNKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTG 203 (272)
T ss_pred CCCcchHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCC
Confidence 532212222345677777777 6688999998754
No 425
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=61.93 E-value=46 Score=31.49 Aligned_cols=113 Identities=15% Similarity=0.159 Sum_probs=60.7
Q ss_pred CHHHHHhhcCCCccEEEEeCCCC-CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc-cCCCCCeEE
Q 021547 173 DLEAVEALADENTAAIVIINPCN-PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV-FGSIVPVIT 250 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~ 250 (311)
-.+.++++...+++.+++.+... .+|.- ..+.-+++.++|+++|+.|+=-++.+.+.....-...+.. +...+++-+
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~~~~~l~~~~~~~~~~~G~val 155 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIINTHIKLNATFAPTMPKKGGIAF 155 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEecCCCCeeeecCCCCCCCCCEEE
Confidence 45666777777888887665443 33321 1122378999999999999999988765443210111110 112233322
Q ss_pred EecCccc--------CCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547 251 LGSISKR--------WIVPGWRFGWLATNDPNGVLQKSGIVGSIK 287 (311)
Q Consensus 251 i~s~sK~--------~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~ 287 (311)
+ |=|-. ..-.|+++++++.-.++.+....++++.+.
T Consensus 156 v-sqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~d~~~~d~l~~l~ 199 (447)
T TIGR02717 156 I-SQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLA 199 (447)
T ss_pred E-echHHHHHHHHHHHHhcCCCcceEEECCchhhCCHHHHHHHHh
Confidence 2 22221 123466677776666555555555555544
No 426
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=61.79 E-value=15 Score=28.02 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=25.5
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 175 EAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 175 ~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.+++.++.++++++++.-..|. +.+.++|+++++.|+.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~~~p---------~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGLEPP---------PELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcCCCC---------HHHHHHHHHhCCcEEE
Confidence 45566677899999999866443 7888899999998875
No 427
>PRK04296 thymidine kinase; Provisional
Probab=61.72 E-value=43 Score=27.40 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPC 194 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~ 194 (311)
.++..+. .+...| .+|++..|.+. .....+...|..+..+.. ...+++.+.+. .+..+|++-..
T Consensus 18 ~~l~~~~-~~~~~g-~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa- 87 (190)
T PRK04296 18 ELLQRAY-NYEERG-MKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA- 87 (190)
T ss_pred HHHHHHH-HHHHcC-CeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc-
Confidence 3444433 344567 78887766322 123344445543332211 12233333222 25556666655
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
+.++.+++.++++.++..|+.+|+=.--..
T Consensus 88 ----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 88 ----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred ----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 346777788899998888988887554443
No 428
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=60.73 E-value=1.4e+02 Score=27.66 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=72.4
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhcCCCCEEEecCCCCcchHH-HHHHcCcE
Q 021547 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITRLGAANILLPRPGWPFYES-FAKRNHIE 158 (311)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-~~~~~g~~ 158 (311)
+.|-.-...+++++++.+-+.+ +|.+......+.++... ..++.-+..+.... ..|+...+|..-.. .....+-+
T Consensus 47 NdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e--~al~f~SGy~AN~~~i~~l~~~~ 123 (388)
T COG0156 47 NDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELEEELADFLGAE--AALLFSSGFVANLGLLSALLKKG 123 (388)
T ss_pred cCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--cEEEEcccchhHHHHHHHhcCCC
Confidence 4676666778899999999976 67766665555544433 23566666665444 56666666654333 22323322
Q ss_pred -EEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEEeccccC
Q 021547 159 -VRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIADEVYGH 228 (311)
Q Consensus 159 -~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~D~ay~~ 228 (311)
++..+ + ..-..+.+-+ -.+.+.+.+-+ | +.+.|+++++-+++. ..+|++|.+|++
T Consensus 124 dli~~D---~----lnHASiidG~rls~a~~~~f~H--n------D~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 124 DLIFSD---E----LNHASIIDGIRLSRAEVRRFKH--N------DLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred cEEEEe---c----hhhhhHHHHHHhCCCcEEEecC--C------CHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 22221 1 1112222222 22444444443 2 445677776665444 499999999996
No 429
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=60.72 E-value=56 Score=28.09 Aligned_cols=95 Identities=18% Similarity=0.215 Sum_probs=56.0
Q ss_pred CEEEeCChHHHH-HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCc-EEEEeeccCCCCcccCHHHHHhhcCC-----C
Q 021547 112 DIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHI-EVRHFDLLPERGWEVDLEAVEALADE-----N 184 (311)
Q Consensus 112 ~v~~t~g~~~a~-~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~-----~ 184 (311)
.+++.+|+++++ +++.+.|.+.| -+|+...---......+...+. ++..+.++- .|.+.+++++.. .
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G-~~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG-AKVVLAARREERLEALADEIGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC-CeEEEEeccHHHHHHHHHhhccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 566777777777 67888889999 7777776666666777777772 333333321 255665554431 2
Q ss_pred ccEEEEeCCCCCCccC---CCHHHHHHHHHH
Q 021547 185 TAAIVIINPCNPCGNV---LTYQHLQKIAET 212 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~---~~~~~l~~l~~l 212 (311)
..-++++|..--.|.. .+.++++.+++.
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 3335666654333332 355666666553
No 430
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=60.32 E-value=1.1e+02 Score=27.18 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=45.9
Q ss_pred CCCCCEEE-eCChHHHHHHHHHHHhcCCCCEEE-ecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547 108 LSADDIYI-TLGCMEAVEIILTVITRLGAANIL-LPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT 185 (311)
Q Consensus 108 ~~~~~v~~-t~g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 185 (311)
+.+...++ .+++.-++.+++-+-. .|..-++ +|...=......++.+|.+++.+|.. .....--.+.+++.....+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~-~g~~~~a~~~a~el~~~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGA-PGNMKGAIERAKELAAEIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCC-CCchHHHHHHHHHHHHhCC
Confidence 34444444 4455556665555443 3423333 44433345678999999999998751 1111112333343444444
Q ss_pred c-EEEEe---CCCCCCcc
Q 021547 186 A-AIVII---NPCNPCGN 199 (311)
Q Consensus 186 ~-~i~i~---~p~nptG~ 199 (311)
. +++.. ||.||-..
T Consensus 137 ~~~~~~~Qf~NpaN~~aH 154 (300)
T COG0031 137 GYAVWLNQFENPANPEAH 154 (300)
T ss_pred CceEchhhcCCCccHHHH
Confidence 4 55543 45555443
No 431
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=59.72 E-value=15 Score=36.06 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGS 233 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~ 233 (311)
++++++++++-|+++||-||+|-+|..+.-++
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 68899999999999999999999999876543
No 432
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=59.00 E-value=1.3e+02 Score=26.74 Aligned_cols=148 Identities=17% Similarity=0.142 Sum_probs=82.8
Q ss_pred HHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhh----cC----CC------CCCCCCEEEeCChHHHHHHHHHHHhc
Q 021547 70 AIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNR----DL----PY------KLSADDIYITLGCMEAVEIILTVITR 132 (311)
Q Consensus 70 a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~----~~----g~------~~~~~~v~~t~g~~~a~~~~~~~l~~ 132 (311)
-+...+... ....|....+...+|+.+.+-++. .. ++ .+...+|++|.|.+..+...+..-.+
T Consensus 105 Sl~kLl~~~~e~~~~~~~S~~~~~~lr~~~i~~I~eli~Eie~~~E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~k 184 (353)
T KOG1465|consen 105 SLHKLLQSTEESHTNKKLSSADAKKLRKDLIEGIKELITEIEGSRENIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAK 184 (353)
T ss_pred HHHHHHhCCCccccccccccccHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhccCceEEecCccHHHHHHHHHHHh
Confidence 444455432 233455544555566555544443 11 11 22457899999999988888887777
Q ss_pred CCC-CEEEec--CCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547 133 LGA-ANILLP--RPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 133 ~g~-d~Vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
+|+ -.|++. .|.+.+... -....|++...++ | ..+-+.++.-.|.|+-++.--+-|-.....-..
T Consensus 185 k~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~MsrVnKVIigt~avl~NGgl~~~~G~~ 254 (353)
T KOG1465|consen 185 KGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSRVNKVIIGTHAVLANGGLRAPSGVH 254 (353)
T ss_pred ccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhhcceEEEEeeeEecCCCeeccchHH
Confidence 651 345554 355544222 2224566666553 3 334444554456665555433444444445567
Q ss_pred HHHHHHHHhCCEEEEecccc
Q 021547 208 KIAETARKLGILVIADEVYG 227 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~ 227 (311)
.++..+++|-+.+++=.-..
T Consensus 255 ~vAlaAk~h~vPv~VlAp~y 274 (353)
T KOG1465|consen 255 TVALAAKHHSVPVIVLAPMY 274 (353)
T ss_pred HHHHHHHhcCCcEEEecchh
Confidence 77778888888888755443
No 433
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=58.66 E-value=53 Score=28.88 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547 65 AVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI 138 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V 138 (311)
....+.+.+.+++..+.. |....+..+....+.+.+.. ..-+++++.|+..+.. +...+...- .|
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~-~~~~~~~~i--PV 84 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQA-LAKHLKDDI--PV 84 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHH-HHHH-SS-S---E
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHH-HHHhcCCCc--EE
Confidence 455566666665432222 33445656555556665632 3446889888766544 444443312 34
Q ss_pred Eec---CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 139 LLP---RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 139 l~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
++. +|...++.......|-++.-+- ......-.++.+.+.+..-.++.++.+++.+.+ ....+.+.+.+++
T Consensus 85 Vf~~V~dp~~~~l~~~~~~~~~nvTGv~--~~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~ 158 (294)
T PF04392_consen 85 VFCGVSDPVGAGLVDSLDRPGKNVTGVS--ERPPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKK 158 (294)
T ss_dssp EEECES-TTTTTS-S-SSS--SSEEEEE--E---HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHH
T ss_pred EEEeccChhhhhccccccCCCCCEEEEE--CCcCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHH
Confidence 332 4554444332222223333332 111122233444444433233335556665532 3457888888888
Q ss_pred hCCEEE
Q 021547 216 LGILVI 221 (311)
Q Consensus 216 ~~~~li 221 (311)
+|+-++
T Consensus 159 ~g~~l~ 164 (294)
T PF04392_consen 159 LGIELV 164 (294)
T ss_dssp TT-EEE
T ss_pred cCCEEE
Confidence 887765
No 434
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=58.44 E-value=30 Score=29.30 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=43.5
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
....++..|..+..+ .....+...-.+.++.++..+..+|++....... ...+++-|++.|+.+|.
T Consensus 20 ~~~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~--------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDS--------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEESSSTTT--------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHH--------HHHHHHHHhhcCceEEE
Confidence 456788889888886 2222232334456677777888888866544333 45666778888998887
No 435
>smart00642 Aamy Alpha-amylase domain.
Probab=58.30 E-value=14 Score=29.72 Aligned_cols=29 Identities=31% Similarity=0.485 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.++++++++.|+++|+.||.|-+.-...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 35889999999999999999999987643
No 436
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=58.11 E-value=1.6e+02 Score=27.52 Aligned_cols=113 Identities=19% Similarity=0.249 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCE-EEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCc
Q 021547 92 ARRAVAEYLNRDLPYKLSADDI-YITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGW 170 (311)
Q Consensus 92 lr~~ia~~l~~~~g~~~~~~~v-~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (311)
.-.+..++..+.+| +....++ +++.| +....++..|.+.|...|.+.+-++..-...++..|.++.
T Consensus 161 i~saAv~lA~~~~~-~L~~~~vlvIGAG--em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~---------- 227 (414)
T COG0373 161 ISSAAVELAKRIFG-SLKDKKVLVIGAG--EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV---------- 227 (414)
T ss_pred hHHHHHHHHHHHhc-ccccCeEEEEccc--HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----------
Confidence 33334444444344 2233333 44444 4456777888888878899999999888888998884433
Q ss_pred ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 021547 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225 (311)
Q Consensus 171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~a 225 (311)
.++++...+.+- ..++.++ +-|+ .+++.+.+++..+.=+ + ++++|=+
T Consensus 228 --~l~el~~~l~~~-DvVissT-sa~~-~ii~~~~ve~a~~~r~--~-~livDia 274 (414)
T COG0373 228 --ALEELLEALAEA-DVVISST-SAPH-PIITREMVERALKIRK--R-LLIVDIA 274 (414)
T ss_pred --cHHHHHHhhhhC-CEEEEec-CCCc-cccCHHHHHHHHhccc--C-eEEEEec
Confidence 445565655532 3333332 2222 2366666666554322 3 7888865
No 437
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=57.77 E-value=1.2e+02 Score=25.95 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeec-cCCCC---cccCHHHHHhhcC----CCcc
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDL-LPERG---WEVDLEAVEALAD----ENTA 186 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~-~~~~~---~~~d~~~l~~~l~----~~~~ 186 (311)
...|+..+++.| |..+|-+-+|+-.. ....++..|++++...- ...++ ..++.+.+.+.+. ++..
T Consensus 107 ~~~A~~~AL~al---g~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aD 183 (239)
T TIGR02990 107 PSSAAVDGLAAL---GVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDAD 183 (239)
T ss_pred HHHHHHHHHHHc---CCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCC
Confidence 345666666666 55688888885543 34677889999887732 22222 3568888877553 4678
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+|+++-.|-+| +.-+-++=++.|..||.=
T Consensus 184 AifisCTnLrt--------~~vi~~lE~~lGkPVlsS 212 (239)
T TIGR02990 184 ALFLSCTALRA--------ATCAQRIEQAIGKPVVTS 212 (239)
T ss_pred EEEEeCCCchh--------HHHHHHHHHHHCCCEEEH
Confidence 88887555566 555556656778887643
No 438
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=56.72 E-value=1.5e+02 Score=27.90 Aligned_cols=97 Identities=12% Similarity=0.026 Sum_probs=51.0
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEe-cCCCCc-----chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc---CC--Ccc
Q 021547 118 GCMEAVEIILTVITRLGAANILL-PRPGWP-----FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA---DE--NTA 186 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~-~~p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l---~~--~~~ 186 (311)
|=|..+..+...+...| .+|.+ ..-.|. .+...++..|+.+... .+.+.+.+.+ .. +..
T Consensus 253 GKTTTiaKLA~~L~~~G-kkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~D 322 (436)
T PRK11889 253 GKTTTLAKMAWQFHGKK-KTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARVD 322 (436)
T ss_pred cHHHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCCC
Confidence 33555666666666667 55553 333342 2233444556554432 1445555544 21 456
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHH---HhCCEEEEecccc
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETAR---KLGILVIADEVYG 227 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~---~~~~~li~D~ay~ 227 (311)
.+++-++.... -+.+.+.++.++.+ .+.+++++|.+..
T Consensus 323 vVLIDTaGRs~---kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 323 YILIDTAGKNY---RASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EEEEeCccccC---cCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 77777764322 23444666666554 3567888887654
No 439
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=56.60 E-value=33 Score=25.52 Aligned_cols=64 Identities=11% Similarity=0.070 Sum_probs=32.2
Q ss_pred HHHhcCCCCEEEecCCCC--------cchHHHHHHcCcEEEEeeccCCCCcccCHHHH---HhhcCC-CccEEEEeCCC
Q 021547 128 TVITRLGAANILLPRPGW--------PFYESFAKRNHIEVRHFDLLPERGWEVDLEAV---EALADE-NTAAIVIINPC 194 (311)
Q Consensus 128 ~~l~~~g~d~Vl~~~p~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l---~~~l~~-~~~~i~i~~p~ 194 (311)
..+.+.|.+.|+.-.|.. ......++..|+.++.+|+... .++.+.+ .+++.. ..+.++.|..+
T Consensus 21 ~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~---~~~~~~v~~f~~~l~~~~~Pvl~hC~sG 96 (110)
T PF04273_consen 21 AQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGG---AITEEDVEAFADALESLPKPVLAHCRSG 96 (110)
T ss_dssp HHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TT---T--HHHHHHHHHHHHTTTTSEEEE-SCS
T ss_pred HHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCC---CCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 455567878888876553 2245789999999999998643 3454444 445543 33566666543
No 440
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=55.58 E-value=1.4e+02 Score=26.03 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np 196 (311)
.-+++..++-+.+.|.|.+|+++--+. .+...++..|+..+.+-. + ..+.+.+++..+....-+++.+-+--
T Consensus 108 ~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva-P----tt~~~rl~~i~~~a~GFiY~vs~~Gv 182 (265)
T COG0159 108 NYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA-P----TTPDERLKKIAEAASGFIYYVSRMGV 182 (265)
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC-C----CCCHHHHHHHHHhCCCcEEEEecccc
Confidence 344556666666778899998864443 356778888888777632 2 12556667666555566677777778
Q ss_pred CccCCC-HHHHHHHHHHHHHh-CCEEE
Q 021547 197 CGNVLT-YQHLQKIAETARKL-GILVI 221 (311)
Q Consensus 197 tG~~~~-~~~l~~l~~l~~~~-~~~li 221 (311)
||.... .+.+.++++..+++ ++.++
T Consensus 183 TG~~~~~~~~~~~~v~~vr~~~~~Pv~ 209 (265)
T COG0159 183 TGARNPVSADVKELVKRVRKYTDVPVL 209 (265)
T ss_pred cCCCcccchhHHHHHHHHHHhcCCCeE
Confidence 888766 33478888888775 44443
No 441
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=54.09 E-value=1.4e+02 Score=25.53 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCC------cchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGW------PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN 195 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n 195 (311)
.....+..+.+.|.|.|+++.-.+ ..+...++..|.++... +.+ ..+.+.++..++.....+++ +.++
T Consensus 89 ~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~-v~p----~T~~e~l~~~~~~~~~~l~m-sv~~ 162 (244)
T PRK13125 89 SLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFF-TSP----KFPDLLIHRLSKLSPLFIYY-GLRP 162 (244)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEE-ECC----CCCHHHHHHHHHhCCCEEEE-EeCC
Confidence 445556666677878899875222 13456778889887654 222 23677888877655555555 5566
Q ss_pred CCccCCCHHHHHHHHHHHHHh--CCEEEEe
Q 021547 196 PCGNVLTYQHLQKIAETARKL--GILVIAD 223 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~--~~~li~D 223 (311)
-+|..+... +.+.++.+++. +..+++|
T Consensus 163 ~~g~~~~~~-~~~~i~~lr~~~~~~~i~v~ 191 (244)
T PRK13125 163 ATGVPLPVS-VERNIKRVRNLVGNKYLVVG 191 (244)
T ss_pred CCCCCchHH-HHHHHHHHHHhcCCCCEEEe
Confidence 677766544 34333444433 3444444
No 442
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=53.83 E-value=63 Score=21.40 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=37.0
Q ss_pred chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEe
Q 021547 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 147 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D 223 (311)
.+...++..|.++..+.- ..+.++ .....+++.+|... ++ ++++++|.++.++=|-++|+|
T Consensus 9 a~~~~L~~~g~~v~~~~~--------~~~~l~----~~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRK--------PYEALE----ADDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHHCCCeeEEecc--------cHHHhC----CCCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 345666777777765532 233332 23445555555422 34 588999999999777777664
No 443
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=53.66 E-value=29 Score=26.29 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=27.8
Q ss_pred ccCHHHH-HhhcCCCccEEEEeCCCCCCccC-CCHHHH---HHHHHHHHHhCCEE
Q 021547 171 EVDLEAV-EALADENTAAIVIINPCNPCGNV-LTYQHL---QKIAETARKLGILV 220 (311)
Q Consensus 171 ~~d~~~l-~~~l~~~~~~i~i~~p~nptG~~-~~~~~l---~~l~~l~~~~~~~l 220 (311)
.+++.++ +.++..+...+++++ |.|.|.. .+.+++ ++|.+.|+..++-+
T Consensus 50 ~v~~R~I~~~al~~~A~~vIl~H-NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 50 PVDPREIFRRALRLNASSVILAH-NHPSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp GCSHHHHHHHHHHTT-SEEEEEE-E-TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred cccHHHHHHHHHhhCCceEEEEE-EcCCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 3455544 557777777777775 4455553 455556 78888888776554
No 444
>PRK08265 short chain dehydrogenase; Provisional
Probab=53.58 E-value=1.4e+02 Score=25.39 Aligned_cols=54 Identities=11% Similarity=-0.011 Sum_probs=30.3
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
...+++|.+++..=..+...|.+.| ..|++..-.-.......+..+.++..+..
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAG-ARVAIVDIDADNGAAVAASLGERARFIAT 59 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCeeEEEEe
Confidence 3456666655544456777777889 67776543333334444444545555544
No 445
>PLN02955 8-amino-7-oxononanoate synthase
Probab=52.87 E-value=2.2e+02 Score=27.32 Aligned_cols=131 Identities=11% Similarity=0.097 Sum_probs=72.0
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHc-----
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITRLGAANILLPRPGWPFYESFAKRN----- 155 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~----- 155 (311)
.|-.-...+++++++.+-+.+ +|.+......+.+.... .-++..+..+.... ..++...+|..-..++...
T Consensus 111 dYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e--~all~sSGy~AN~~~i~aL~~~~~ 187 (476)
T PLN02955 111 DYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLKKKE--DCLVCPTGFAANMAAMVAIGSVAS 187 (476)
T ss_pred CccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHHCCC--cEEEECChHHHHHHHHHHHhhccc
Confidence 577767789999999999875 78766666665554443 33666666666544 4555556665433333322
Q ss_pred ----------CcE-EEEeeccCCCCcccCHHHHHhhc--CC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 156 ----------HIE-VRHFDLLPERGWEVDLEAVEALA--DE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 156 ----------g~~-~~~~~~~~~~~~~~d~~~l~~~l--~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
+-+ ++.++. ..-..+..-+ .. +..+-+...++| +.+.++++++-+.....+||
T Consensus 188 ~~~~~~~~~~~~~d~i~~D~-------~~HaSI~dG~~ls~~~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~~Vv 254 (476)
T PLN02955 188 LLAASGKPLKNEKVAIFSDA-------LNHASIIDGVRLAERQGNVEVFVYRHC------DMYHLNSLLSSCKMKRKVVV 254 (476)
T ss_pred cccccccccCCCCcEEEEec-------cchHHHHHHHHhccccCCceEEEeCCC------CHHHHHHHHHhCCCCceEEE
Confidence 111 122211 0112222211 11 112223334454 44567777765555568999
Q ss_pred EeccccC
Q 021547 222 ADEVYGH 228 (311)
Q Consensus 222 ~D~ay~~ 228 (311)
+|.+|+.
T Consensus 255 ~EgV~Sm 261 (476)
T PLN02955 255 TDSLFSM 261 (476)
T ss_pred EeCCCCC
Confidence 9999886
No 446
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=52.65 E-value=34 Score=32.34 Aligned_cols=74 Identities=16% Similarity=0.287 Sum_probs=46.6
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc--------EEEE----eCC--CCCCccCCCHHHHHHHHHHHH
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA--------AIVI----INP--CNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~--------~i~i----~~p--~nptG~~~~~~~l~~l~~l~~ 214 (311)
.......+++.-.+.+.+..+|.+....+.++...... ..+. ..+ ..+.|-.++.+++++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 45566677788888777777777766555443221100 0000 011 124456799999999999999
Q ss_pred HhCCEEEE
Q 021547 215 KLGILVIA 222 (311)
Q Consensus 215 ~~~~~li~ 222 (311)
++||-||-
T Consensus 108 ~rgI~VIP 115 (445)
T cd06569 108 ARHIEVIP 115 (445)
T ss_pred HcCCEEEE
Confidence 99988773
No 447
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=51.91 E-value=31 Score=31.50 Aligned_cols=74 Identities=23% Similarity=0.422 Sum_probs=44.6
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC--ccEEEEeCC-----CCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN--TAAIVIINP-----CNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~i~i~~p-----~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
...+...+++...+.+.+..+|.+....+.++-... ...-....+ ..+.|..++.+++++|++.|+++||-||
T Consensus 24 Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 24 IDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 345556677777777766666666554443321100 000000011 2355678999999999999999998777
Q ss_pred E
Q 021547 222 A 222 (311)
Q Consensus 222 ~ 222 (311)
-
T Consensus 104 P 104 (357)
T cd06563 104 P 104 (357)
T ss_pred E
Confidence 4
No 448
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=51.90 E-value=14 Score=32.26 Aligned_cols=28 Identities=32% Similarity=0.487 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.|+++|+.||.|-+.-...
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 6889999999999999999999987644
No 449
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=49.43 E-value=1.8e+02 Score=25.39 Aligned_cols=69 Identities=9% Similarity=0.093 Sum_probs=45.2
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
....++..|..++.+.++..+-...+.+.+.+.+ +. +...|++.+.+.. +.+-+..|+...++.|.-++
T Consensus 191 ~~~~l~~~G~~~v~Wsvd~~Dw~~~~~~~i~~~v~~~~~~G~IILmHd~~~-----T~~aL~~iI~~Lk~kGy~fv 261 (268)
T TIGR02873 191 VVQIAADLQMGTIMWTVDTIDWKNPSPSVMVNRVLSKIHPGAMVLMHPTAS-----STEGLEEMITIIKEKGYKIG 261 (268)
T ss_pred HHHHHHHCCCeEEEeccCCCCCCCCCHHHHHHHHHhcCCCCcEEEEcCCcc-----HHHHHHHHHHHHHHCCCEEE
Confidence 3567788999998887754332234566554433 22 4567788886532 35669999999998886543
No 450
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=49.40 E-value=56 Score=29.68 Aligned_cols=53 Identities=17% Similarity=0.119 Sum_probs=38.4
Q ss_pred CEEEecCCCCc-chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC-CCCCC
Q 021547 136 ANILLPRPGWP-FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPC 197 (311)
Q Consensus 136 d~Vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~npt 197 (311)
.+|++.+..-. +....+...|++++.+|.. .+.+++.+ -++.+|+++| |.+|.
T Consensus 180 ~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~---~~pDGiflSNGPGDP~ 234 (368)
T COG0505 180 KHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILA---LNPDGIFLSNGPGDPA 234 (368)
T ss_pred cEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHh---hCCCEEEEeCCCCChh
Confidence 56776666665 6677888899999999863 35555544 4677999987 67885
No 451
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=49.18 E-value=71 Score=26.72 Aligned_cols=102 Identities=20% Similarity=0.128 Sum_probs=50.5
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC---cccCHHHHHhhcCCCccEEEEeC
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG---WEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
+.|-|-+|..-.+.+.+.|.|.|+..--+|..-.......|++..+.......+ ..+|++.+ +..++..+++--
T Consensus 15 GVGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~Dldai---L~R~P~vvLVDE 91 (211)
T PF02702_consen 15 GVGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAI---LARRPQVVLVDE 91 (211)
T ss_dssp TSSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHH---HHH--SEEEES-
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHH---HhcCCCEEEeCc
Confidence 456688888888888888978887666666544455556676655443322222 24555544 445666666653
Q ss_pred --CCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 193 --PCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 193 --p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
-.|+.|..- ...++.+-++.. .|+-|+.
T Consensus 92 LAHtN~pgsr~-~kR~qDVeeLL~-aGIdV~T 121 (211)
T PF02702_consen 92 LAHTNAPGSRH-KKRYQDVEELLD-AGIDVYT 121 (211)
T ss_dssp TT-B--TT-SS-SBHHHHHHHHHH-TT-EEEE
T ss_pred ccccCCCCCCC-cccHHhHHHHHH-CCCeEEE
Confidence 258888753 345677766665 4776654
No 452
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=49.13 E-value=31 Score=31.34 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=31.8
Q ss_pred CHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 173 DLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 173 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
|...|....+. ....|+...+..|.|.+++.++++++.+.++++|+.+-+
T Consensus 13 dpv~l~~irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 13 DPVTLWDIRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp -SS-HHHHCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CcchHHHHHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 44445554443 677788788889999999999999999999999876554
No 453
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=48.88 E-value=66 Score=27.03 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=38.1
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 174 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
++.++++++....++-+=.-+..+-.. .+..+++..+|++|++.+|+++-...
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~dl 76 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVDL 76 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHHH
Confidence 678888888776666544444333222 45678999999999999999987764
No 454
>PTZ00323 NAD+ synthase; Provisional
Probab=48.80 E-value=1.9e+02 Score=25.74 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=52.0
Q ss_pred CCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHH-HHHHHHHH-HhcCC--
Q 021547 60 CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCME-AVEIILTV-ITRLG-- 134 (311)
Q Consensus 60 ~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~-a~~~~~~~-l~~~g-- 134 (311)
..+.+|++.+.+.+.-... .+.+..-+......+.+++.+ ...+.+++ -+||.. ++.+++.. .++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~L~~~l~~-----~g~~~vVVglSGGVDSav~aaLa~~alg~~~~ 75 (294)
T PTZ00323 4 VAPLHPELQRVLKEVRRKR---AFNPAAWIEKKCAKLNEYMRR-----CGLKGCVTSVSGGIDSAVVLALCARAMRMPNS 75 (294)
T ss_pred cccCCHHHHHHHHHhCCCC---CCCHHHHHHHHHHHHHHHHHH-----cCCCcEEEECCCCHHHHHHHHHHHHHhccccC
Confidence 4567899988888775432 344433334455556666553 22344544 355533 33322222 12211
Q ss_pred --CCEEEecCCCCc------chHHHHHHcCcEEEEeecc
Q 021547 135 --AANILLPRPGWP------FYESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 135 --~d~Vl~~~p~~~------~~~~~~~~~g~~~~~~~~~ 165 (311)
...+.+..|.+. .-...++..|++.+.+++.
T Consensus 76 ~~~~~~~v~~P~~ss~~~~~~A~~la~~lGi~~~~idi~ 114 (294)
T PTZ00323 76 PIQKNVGLCQPIHSSAWALNRGRENIQACGATEVTVDQT 114 (294)
T ss_pred CceEEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEECc
Confidence 013334566552 2356788899998888764
No 455
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=48.53 E-value=70 Score=28.20 Aligned_cols=54 Identities=19% Similarity=0.078 Sum_probs=34.3
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+++.+|.+.+++.++ .+..++++.- ++--+..++.+|++++++.+.+. ++.||+
T Consensus 14 ~dg~iD~~~l~~l~~~l~~~Gv~gi~v~G-stGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 14 ADGSFDEDAYRAHVEWLLSYGAAALFAAG-GTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-CCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 345788887777543 3566665443 34455668888888888876654 455554
No 456
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=48.46 E-value=1.7e+02 Score=24.75 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=56.1
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEec-------------CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLP-------------RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-------------~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
++.-+||-.+..++..++.+ . +.+.+. .+...-....++..|+..+.++..... .--.+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~-~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-H-EVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT---EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-C-CccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHH
Confidence 56678888888888888766 4 432211 111122456889999999888874221 122466666
Q ss_pred hcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 180 LADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 180 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
.++. +..+++ +|.+.+..++..+-++|.+.|+..+
T Consensus 80 ~l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 80 ALKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 6653 444444 7888999999999999999987744
No 457
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=48.38 E-value=2e+02 Score=25.69 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=59.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCC-CEEEec--CCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGA-ANILLP--RPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~-d~Vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
....+++|.|.+..+..++....+.|+ -+|++. .|...+. ...+...|+++..++- ..+-..+.
T Consensus 119 ~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D----------sav~~~m~- 187 (310)
T PRK08535 119 RDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD----------SAVRYFMK- 187 (310)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh----------hHHHHHHH-
Confidence 345688888877777666666654441 345554 4555442 2455567777777641 12222222
Q ss_pred CccEEEEe-CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 184 NTAAIVII-NPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 184 ~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+...+++. ..-...|.+.++----.++-+|+.+++.+++=
T Consensus 188 ~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 188 DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 23344432 22345565666555677788889999988874
No 458
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=48.11 E-value=90 Score=24.43 Aligned_cols=45 Identities=9% Similarity=0.114 Sum_probs=33.5
Q ss_pred Ccc-EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547 184 NTA-AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF 231 (311)
Q Consensus 184 ~~~-~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~ 231 (311)
+.. +||+-.|-+|...-.+ ++.|.++|.-||+.+-...+-+.+..
T Consensus 73 ~id~vIFf~DPl~~~phepD---i~aLlRlc~v~nIP~AtN~aTA~~li 118 (143)
T TIGR00160 73 KIDAVIFFWDPLNAQPHEPD---VKALLRLCTVWNIPLATNVATADFLI 118 (143)
T ss_pred CCCEEEEecCCCCCCCCCcC---HHHHHHHHHhhCcccccCHHHHHHHH
Confidence 444 4577788777655555 99999999999999888777766543
No 459
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=47.07 E-value=1.5e+02 Score=27.70 Aligned_cols=95 Identities=19% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCEEEeCChHHHHHHHHHHHh---------cCCCCEEEecCCCCcchH-----H----HHHHcCcEEEE-eeccCCCCcc
Q 021547 111 DDIYITLGCMEAVEIILTVIT---------RLGAANILLPRPGWPFYE-----S----FAKRNHIEVRH-FDLLPERGWE 171 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~---------~~g~d~Vl~~~p~~~~~~-----~----~~~~~g~~~~~-~~~~~~~~~~ 171 (311)
+-|++++|+++.....+.-+. +++ |.|++..+.++++. . .....|.++.. +.. + .-
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~-d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~---S-gH 361 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKG-DTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV---S-GH 361 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCC-CEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe---c-CC
Confidence 456777676544433333332 267 89999987787654 1 23346666543 221 1 22
Q ss_pred cCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 172 VDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 172 ~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
.+.++|...++. +++.++-.+.-.. .+....+++++.|+
T Consensus 362 a~~~dl~~~i~~~~Pk~~ipvHge~~--------~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 362 ASQEDHKLLLRLLKPKYIIPVHGEYR--------MLINHTKLAEEEGY 401 (422)
T ss_pred CCHHHHHHHHHHhCCCEEEecCCcHH--------HHHHHHHHHHHcCC
Confidence 355666665542 5666665553322 37777778876653
No 460
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=46.81 E-value=70 Score=27.46 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCEEEEecccc
Q 021547 204 QHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+.++++++.|.++|+.||+|--..
T Consensus 62 ~~ld~~v~~a~~~gi~vild~h~~ 85 (281)
T PF00150_consen 62 ARLDRIVDAAQAYGIYVILDLHNA 85 (281)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEEES
T ss_pred HHHHHHHHHHHhCCCeEEEEeccC
Confidence 458899999999999999987664
No 461
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=46.77 E-value=1.2e+02 Score=26.56 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCC-CEEEec--CCCCcc--hHHHHHHcCcEEEEeecc
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGA-ANILLP--RPGWPF--YESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~-d~Vl~~--~p~~~~--~~~~~~~~g~~~~~~~~~ 165 (311)
..++.+++...+ -+....+++|.|-+..+..++....+.|. -+|++. .|.+.+ ....+...|+.+..++-
T Consensus 92 ~~~~~I~~~~~~----~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d- 166 (282)
T PF01008_consen 92 QAREKIADHASE----LINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD- 166 (282)
T ss_dssp HHHHHHHHHHHC----CC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G-
T ss_pred HHHHHHHHHHHH----hccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec-
Confidence 344555555443 24566788898888888777777655441 244443 565555 23445557888777742
Q ss_pred CCCCcccCHHHHHhhcCCCccEEEEeC-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 166 PERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 166 ~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
..+-..++.+...+++.. .--+.|.++.+---..++-.|+++++.+++=
T Consensus 167 ---------~~~~~~m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 167 ---------SAVGYVMPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ---------GGHHHHHHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred ---------hHHHHHHHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 222222332233333332 2223343333333456777889999988875
No 462
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=46.57 E-value=2.2e+02 Score=25.55 Aligned_cols=117 Identities=20% Similarity=0.075 Sum_probs=60.4
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCC-C-EEEecCCCCcchHHHHH-HcC-cEEEEeeccCCCCcccCHHHHHhhcCC-Ccc
Q 021547 112 DIYITLGCMEAVEIILTVITRLGA-A-NILLPRPGWPFYESFAK-RNH-IEVRHFDLLPERGWEVDLEAVEALADE-NTA 186 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~-d-~Vl~~~p~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~ 186 (311)
.+++|.|+.-.=...++.+++... + .+.+..-+|.+-...+. ..+ .+..++..+ --|.+.+.+.+.+ ++.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~D-----I~D~~~v~~~~~~~~~D 76 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGD-----ICDRELVDRLFKEYQPD 76 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEecc-----ccCHHHHHHHHHhcCCC
Confidence 467777765444555566554332 3 35577888876544332 222 133443322 1266777776664 333
Q ss_pred EEEEeC--CCCCCccCCCHHH-------HHHHHHHHHHhCC-----EEEEeccccCCccCC
Q 021547 187 AIVIIN--PCNPCGNVLTYQH-------LQKIAETARKLGI-----LVIADEVYGHLAFGS 233 (311)
Q Consensus 187 ~i~i~~--p~nptG~~~~~~~-------l~~l~~l~~~~~~-----~li~D~ay~~~~~~~ 233 (311)
+++--. .|.--.+.-|... --.|++.+++++. .|=.||+|+.+..++
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 332111 1111111111111 2567788888873 455799999987754
No 463
>PRK03906 mannonate dehydratase; Provisional
Probab=46.13 E-value=53 Score=30.39 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=37.7
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
|...|...-+.....|+..-++-|.|.+++.++++++.+.++++|+.+-+
T Consensus 12 d~~~l~~~rQ~G~~~iv~~l~~~~~g~~W~~~~i~~~~~~ie~~Gl~~~v 61 (385)
T PRK03906 12 DPVTLEDIRQPGATGIVTALHDIPVGEVWPVEEILARKAEIEAAGLEWSV 61 (385)
T ss_pred CcchHHHHhcCCCCceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 44445554446677777666778999999999999999999999866544
No 464
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.92 E-value=2.3e+02 Score=25.73 Aligned_cols=92 Identities=15% Similarity=0.200 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
.++.+.....+.+ -. ..-.|.+|...++.....++++..... ...+.+..++. +-|.+++.-|- .+
T Consensus 42 s~~~A~~fAq~~~-~~---~~k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~-~~K~VL~EKPl-----a~ 107 (351)
T KOG2741|consen 42 SLERAKEFAQRHN-IP---NPKAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALN-KGKHVLCEKPL-----AM 107 (351)
T ss_pred cHHHHHHHHHhcC-CC---CCccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHH-cCCcEEecccc-----cC
Confidence 5555555554444 11 355788899999999889988876432 13333333333 33445555542 35
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
+.++.++|++.|++.| ..+.|..+.-
T Consensus 108 n~~e~~~iveaA~~rg-v~~meg~~~R 133 (351)
T KOG2741|consen 108 NVAEAEEIVEAAEARG-VFFMEGLWWR 133 (351)
T ss_pred CHHHHHHHHHHHHHcC-cEEEeeeeee
Confidence 6779999999999988 5556666654
No 465
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=45.19 E-value=61 Score=29.53 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=26.4
Q ss_pred CHHHHHhhcCCCccEEEEeCC-CCCCccC--CCHHHHHHHHHHHHHhCC
Q 021547 173 DLEAVEALADENTAAIVIINP-CNPCGNV--LTYQHLQKIAETARKLGI 218 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p-~nptG~~--~~~~~l~~l~~l~~~~~~ 218 (311)
+++.+..++.....+|++.-+ -|-.+.. ++.+++++.+++|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 455666666555566665544 2333333 666666666666666655
No 466
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=45.12 E-value=25 Score=33.54 Aligned_cols=29 Identities=34% Similarity=0.363 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-+.-+..
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 46789999999999999999999987754
No 467
>PLN00191 enolase
Probab=43.96 E-value=1.2e+02 Score=28.86 Aligned_cols=100 Identities=9% Similarity=0.062 Sum_probs=59.7
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np 196 (311)
++.+++.. +..|+++- +-+.+++|.... +..+.+.... ..+++..++.+..+++.+++.+..+..-++..-++.-
T Consensus 296 s~~e~i~~-~~~L~~~y-~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~qi 371 (457)
T PLN00191 296 SGDELIDL-YKEFVSDY-PIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQI 371 (457)
T ss_pred CHHHHHHH-HHHHhhcC-CcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEeccccc
Confidence 33444444 44444544 567889998653 2222222221 3344443344446788999988876655565555543
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 021547 197 CGNVLTYQHLQKIAETARKLGILVIADEV 225 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~~~li~D~a 225 (311)
.|.. +..+++++|+++|+.+++-..
T Consensus 372 GGIT----ea~~~a~lA~~~G~~~~ishr 396 (457)
T PLN00191 372 GTVT----ESIEAVKMSKAAGWGVMTSHR 396 (457)
T ss_pred CCHH----HHHHHHHHHHHCCCEEEeCCC
Confidence 3332 588999999999999887543
No 468
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=43.67 E-value=82 Score=28.38 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=49.7
Q ss_pred hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC--CC-------ccC
Q 021547 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN--PC-------GNV 200 (311)
Q Consensus 131 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n--pt-------G~~ 200 (311)
...| ..+++.+..+......++..|.....+-+...+...--++.++..++. .++++++-+... |. |..
T Consensus 80 ~~~g-~~v~yId~E~~~~~~~a~~lGvd~~~l~v~~p~~~eq~l~~~~~li~~~~~~lIVIDSv~al~~~~E~e~~~g~~ 158 (321)
T TIGR02012 80 QKAG-GTAAFIDAEHALDPVYARKLGVDIDNLLVSQPDTGEQALEIAETLVRSGAVDIIVVDSVAALVPKAEIEGEMGDS 158 (321)
T ss_pred HHcC-CcEEEEcccchhHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhccCCcEEEEcchhhhccchhhccccccc
Confidence 3456 667766666665566777777653322221111111123344444443 566666666532 21 111
Q ss_pred C----C---HHHHHHHHHHHHHhCCEEEE-ecccc
Q 021547 201 L----T---YQHLQKIAETARKLGILVIA-DEVYG 227 (311)
Q Consensus 201 ~----~---~~~l~~l~~l~~~~~~~li~-D~ay~ 227 (311)
. . ...+.+|..+++++|+.+|. ..++.
T Consensus 159 ~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~ 193 (321)
T TIGR02012 159 HVGLQARLMSQALRKLTGALSKSNTTAIFINQIRE 193 (321)
T ss_pred chhHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 0 0 13467788889999987665 33443
No 469
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=43.64 E-value=69 Score=27.32 Aligned_cols=68 Identities=21% Similarity=0.174 Sum_probs=35.3
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
...++..|+.+..+......+.....+.++.+++.+..++++....++. +...++.++++++.+|.=+
T Consensus 22 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--------~~~~~~~~~~~~iPvV~~~ 89 (275)
T cd06320 22 ENEAKKLGVSVDIQAAPSEGDQQGQLSIAENMINKGYKGLLFSPISDVN--------LVPAVERAKKKGIPVVNVN 89 (275)
T ss_pred HHHHHHhCCeEEEEccCCCCCHHHHHHHHHHHHHhCCCEEEECCCChHH--------hHHHHHHHHHCCCeEEEEC
Confidence 4567778887776543221221112234555666677777664322211 2333455667788666433
No 470
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=43.16 E-value=1.2e+02 Score=25.76 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=44.2
Q ss_pred CCCCEEEeCChHHHH-HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547 109 SADDIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~-~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 165 (311)
.+.-|++|.++++++ +++..-|.+.| -.|+-..-.-.+..+.....|+.+..+++.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G-~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~ 62 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNG-YLVYATARRLEPMAQLAIQFGLKPYKLDVS 62 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCC-eEEEEEccccchHhhHHHhhCCeeEEeccC
Confidence 455688888888887 46666777899 888877777777888888999998888775
No 471
>PRK09354 recA recombinase A; Provisional
Probab=42.92 E-value=1.3e+02 Score=27.46 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=48.8
Q ss_pred cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC--CC-------ccC-
Q 021547 132 RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN--PC-------GNV- 200 (311)
Q Consensus 132 ~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n--pt-------G~~- 200 (311)
..| ..+++.+..+......++..|..+..+-+...+...--++.++..++. .+++|++-+... |. |..
T Consensus 86 ~~G-~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~~Eq~l~i~~~li~s~~~~lIVIDSvaaL~~~~E~eg~~gd~~ 164 (349)
T PRK09354 86 KAG-GTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSH 164 (349)
T ss_pred HcC-CcEEEECCccchHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhcCCCCEEEEeChhhhcchhhhcCCccccc
Confidence 456 677777777766667778888653322221111111123344444443 566677666542 21 111
Q ss_pred C-CH-----HHHHHHHHHHHHhCCEEEE
Q 021547 201 L-TY-----QHLQKIAETARKLGILVIA 222 (311)
Q Consensus 201 ~-~~-----~~l~~l~~l~~~~~~~li~ 222 (311)
. .. ..+.+|..+++++|+.+|.
T Consensus 165 ~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 165 VGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 0 11 2267788888999987765
No 472
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=42.65 E-value=1.4e+02 Score=22.03 Aligned_cols=97 Identities=18% Similarity=0.094 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCC
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPC 197 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~npt 197 (311)
--..+..++..+.+.| -+++... +...+++..|+++..+....+.+ + ..+.+.+.+ +..-+++..|. +.
T Consensus 10 ~K~~~~~~a~~l~~~G-~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~ 79 (112)
T cd00532 10 VKAMLVDLAPKLSSDG-FPLFATG----GTSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PR 79 (112)
T ss_pred cHHHHHHHHHHHHHCC-CEEEECc----HHHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CC
Confidence 3344555556665667 5555443 23455566888877765332211 2 345555555 44555555553 11
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEV 225 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~a 225 (311)
-......+-..|.+.|.++++.++.+-.
T Consensus 80 ~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 80 RDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred cccccCCChHHHHHHHHHcCCCEEECHH
Confidence 1001233467888899999999988754
No 473
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=42.51 E-value=2.2e+02 Score=24.52 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=59.2
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhc-------------------CCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITR-------------------LGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~-------------------~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~ 167 (311)
...+|++|.|+...-. ... ... +. +.++...+-|+-- ..+++..++.+.... +
T Consensus 129 ~~~~iflttGsk~L~~-f~~-~~~~~~r~~~RvLp~~~~~~g~~~-~~iia~~GPfs~e~n~al~~~~~i~~lVtK---~ 202 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPP-FVP-APLPGERLFARVLPTPESALGFPP-KNIIAMQGPFSKELNRALFRQYGIDVLVTK---E 202 (249)
T ss_pred CCCCEEEeCchhhHHH-Hhh-cccCCCEEEEEECCCccccCCCCh-hhEEEEeCCCCHHHHHHHHHHcCCCEEEEc---C
Confidence 4478999999875433 322 111 12 3455444444322 357777888776543 2
Q ss_pred CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
++..-..+.++.+..-+.+.+++.-|.-|.|... -++++++.++++
T Consensus 203 SG~~g~~eKi~AA~~lgi~vivI~RP~~~~~~~~-~~~~~e~l~~l~ 248 (249)
T PF02571_consen 203 SGGSGFDEKIEAARELGIPVIVIKRPPEPYGDPV-VETIEELLDWLE 248 (249)
T ss_pred CCchhhHHHHHHHHHcCCeEEEEeCCCCCCCCcc-cCCHHHHHHHHh
Confidence 3333456788888888999999999976655443 113666666554
No 474
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=42.33 E-value=2.5e+02 Score=25.04 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=57.6
Q ss_pred CCCEEEeCChH--------HHHHHHHHHHhcCCC-CEEEec--CCCCcc-h--HHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547 110 ADDIYITLGCM--------EAVEIILTVITRLGA-ANILLP--RPGWPF-Y--ESFAKRNHIEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 110 ~~~v~~t~g~~--------~a~~~~~~~l~~~g~-d~Vl~~--~p~~~~-~--~~~~~~~g~~~~~~~~~~~~~~~~d~~ 175 (311)
..++++|.|.+ .....++....+.|+ -+|++. .|.+.+ . ...+...|+++..+. | .
T Consensus 118 ~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~---------D-s 187 (303)
T TIGR00524 118 DGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLIT---------D-S 187 (303)
T ss_pred CCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEEC---------h-h
Confidence 45678887766 333344444433331 455554 577666 2 345556787777663 1 2
Q ss_pred HHHhhcC-CCccEEEEe-CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 176 AVEALAD-ENTAAIVII-NPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 176 ~l~~~l~-~~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
.+-..++ .+...+++. ..-...|.+.++----.++-+|+.+++.+++=
T Consensus 188 a~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 188 MAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 2223333 134444443 22345555555555567778889999988874
No 475
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=42.22 E-value=66 Score=29.82 Aligned_cols=48 Identities=25% Similarity=0.270 Sum_probs=36.3
Q ss_pred cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.++.+.+ .....|+...++-|.|.+|+.++++++.+.++++|+.+-+
T Consensus 14 v~l~~irQ---~G~~giV~al~~~p~gevW~~~~i~~~k~~ie~~GL~~~v 61 (394)
T TIGR00695 14 VSLEDVRQ---AGATGIVTALHHIPNGEVWEKEEIRKRKEYIESAGLHWSV 61 (394)
T ss_pred chHHHHhh---cCCcceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 34444444 4667777666778999999999999999999999866544
No 476
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=41.78 E-value=2.5e+02 Score=24.95 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=57.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCC-CEEEec--CCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGA-ANILLP--RPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~-d~Vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
....+++|.|.+..+..++....+.|. -+|++. .|.+.+. ...+...|+.+..++ | ..+-..++.
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~---------D-sa~~~~m~~ 183 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIV---------D-SAVRYFMKE 183 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEe---------h-hHHHHHHHh
Confidence 345678888877666666665544441 345543 4665553 344555777777664 1 122222222
Q ss_pred CccEEEEe-CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 184 NTAAIVII-NPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 184 ~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
...+++. .--...|.++++----.++-.|+.+++.+++=
T Consensus 184 -vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 -VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred -CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 3333332 22234555555555567788889999988873
No 477
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=41.36 E-value=23 Score=23.44 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=22.6
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
..+...+.-|.|.+ +.+++..|++++++|+
T Consensus 8 g~~~v~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 8 GFYMVRIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp TEEEEEEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred eEEEEEEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 34444555677887 8899999999999987
No 478
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=41.22 E-value=2.3e+02 Score=24.38 Aligned_cols=114 Identities=15% Similarity=0.154 Sum_probs=60.3
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCC----------cchHHHHHHcCcEEEEeeccCCCCcccCHHH
Q 021547 108 LSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGW----------PFYESFAKRNHIEVRHFDLLPERGWEVDLEA 176 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 176 (311)
..+..|++|.|-.+.=.-+...|. .-|.+.|++.+-.- .-|...+..-+++-+.++ .--+|-+....
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn--~RIdWL~HfSA 119 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVN--KRIDWLVHFSA 119 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcc--cccceeeeHHH
Confidence 355677887765443222222221 22324455442111 123444444444433332 22345566666
Q ss_pred HHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC
Q 021547 177 VEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232 (311)
Q Consensus 177 l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~ 232 (311)
|..+..+. |-|.....+.+-+..+++++++|++-+++-..-+.|..+
T Consensus 120 LLSAvGE~---------NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPt 166 (366)
T KOG2774|consen 120 LLSAVGET---------NVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPT 166 (366)
T ss_pred HHHHhccc---------CCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCC
Confidence 66665442 223333344445788999999999999999888876543
No 479
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=41.19 E-value=2e+02 Score=24.09 Aligned_cols=119 Identities=18% Similarity=0.176 Sum_probs=63.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeC---ChHHHHHHHHHHHhcCCCCEEEecCCC--CcchHHHHHHcCcEEEEee
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITL---GCMEAVEIILTVITRLGAANILLPRPG--WPFYESFAKRNHIEVRHFD 163 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~---g~~~a~~~~~~~l~~~g~d~Vl~~~p~--~~~~~~~~~~~g~~~~~~~ 163 (311)
-.++++.+...+.+.-+ -+.- +=..++ ....++..++..|.+.| -.++.+-+ .+-....++..|......+
T Consensus 73 ~~~i~~~l~~al~~vp~-a~Gv-nNhmGS~~T~~~~~m~~vl~~l~~~g--l~FvDS~T~~~s~a~~~A~~~gvp~~~rd 148 (213)
T PF04748_consen 73 EEEIRKRLEAALARVPG-AVGV-NNHMGSRFTSDREAMRWVLEVLKERG--LFFVDSRTTPRSVAPQVAKELGVPAARRD 148 (213)
T ss_dssp HHHHHHHHHHHHCCSTT--SEE-EEEE-CCHHC-HHHHHHHHHHHHHTT---EEEE-S--TT-SHHHHHHHCT--EEE-S
T ss_pred HHHHHHHHHHHHHHCCC-cEEE-ecCCCccccCCHHHHHHHHHHHHHcC--CEEEeCCCCcccHHHHHHHHcCCCEEeec
Confidence 36778888888865211 0000 111122 22456777888887777 44453333 2334678899998887776
Q ss_pred ccCCCCcccCHHHHHhhcC-------CCccEEEEeCCCCCCccCCCHHHHHHHHHHHH---HhCCEEE
Q 021547 164 LLPERGWEVDLEAVEALAD-------ENTAAIVIINPCNPCGNVLTYQHLQKIAETAR---KLGILVI 221 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~---~~~~~li 221 (311)
+..++. .+.+.+++.++ ++-.+|.|.+|+..| ++.|.+++. +.|+-++
T Consensus 149 vfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T--------l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 149 VFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET--------LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp EETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH--------HHHHHHHHHHHHHCTEEE-
T ss_pred eecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH--------HHHHHHHHhHHhhCCEEEE
Confidence 654333 56666665443 366778888887665 666666554 4455543
No 480
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=40.40 E-value=2.8e+02 Score=24.99 Aligned_cols=126 Identities=14% Similarity=0.158 Sum_probs=70.4
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC---CCCcchHHHHHHcCcE
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR---PGWPFYESFAKRNHIE 158 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~---p~~~~~~~~~~~~g~~ 158 (311)
.|....|.....+.+++-+.. +..+++++-++.. -..++.+... -.|++.. |.-.......+.-|-+
T Consensus 66 ~~~na~~~~~~a~~iarql~~------~~~dviv~i~tp~-Aq~~~s~~~~---iPVV~aavtd~v~a~Lv~~~~~pg~N 135 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLVG------DKPDVIVAIATPA-AQALVSATKT---IPVVFAAVTDPVGAKLVKSLEQPGGN 135 (322)
T ss_pred EeecCCCChHHHHHHHHHhhc------CCCcEEEecCCHH-HHHHHHhcCC---CCEEEEccCchhhccCCccccCCCCc
Confidence 466677888888888888854 4446777666553 3444444432 2344432 2222222222233334
Q ss_pred EEEeeccCCCCcccCHHH---HHhhcCCCccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 159 VRHFDLLPERGWEVDLEA---VEALADENTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 159 ~~~~~~~~~~~~~~d~~~---l~~~l~~~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
++-+. + ..+.++ |-+.+-++.+-+ ++.+|+.+- +...++++.+.+++.|+-+++=.+-.
T Consensus 136 vTGvs-----D-~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~eelk~~A~~~Gl~vve~~v~~ 198 (322)
T COG2984 136 VTGVS-----D-LLPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVEELKKEARKAGLEVVEAAVTS 198 (322)
T ss_pred eeecC-----C-cchHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHHHHHHHHHHCCCEEEEEecCc
Confidence 44331 1 112222 222344566666 777775433 45679999999999999999866643
No 481
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=39.93 E-value=2.5e+02 Score=24.36 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
+++..+..+.+.|.|.+++++--+. .+...++..|+..+.+= .+. .+.+.++........-+++.+-...||
T Consensus 105 G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lv-ap~----t~~eri~~i~~~s~gfIY~vs~~GvTG 179 (258)
T PRK13111 105 GVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLV-APT----TTDERLKKIASHASGFVYYVSRAGVTG 179 (258)
T ss_pred CHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEe-CCC----CCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5666777777888889999886665 34566677888877631 111 244666665444444455444444466
Q ss_pred cC-CCHHHHHHHHHHHHHh-CCEEEE
Q 021547 199 NV-LTYQHLQKIAETARKL-GILVIA 222 (311)
Q Consensus 199 ~~-~~~~~l~~l~~l~~~~-~~~li~ 222 (311)
.. -..+.+.++++.++++ ++.+++
T Consensus 180 ~~~~~~~~~~~~i~~vk~~~~~pv~v 205 (258)
T PRK13111 180 ARSADAADLAELVARLKAHTDLPVAV 205 (258)
T ss_pred cccCCCccHHHHHHHHHhcCCCcEEE
Confidence 62 1223466666666665 666664
No 482
>PLN03244 alpha-amylase; Provisional
Probab=39.61 E-value=53 Score=33.35 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=29.6
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF 231 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~ 231 (311)
|+...=++++++++++.|++.|+-||.|-+|..+.-
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 333444688999999999999999999999987643
No 483
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=39.42 E-value=2.4e+02 Score=24.04 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=57.1
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeC
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIIN 192 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~ 192 (311)
..+.++++...+......| ++|++....-.. ....+...|+.+..++......-..+.+.+...+ ..+..++++++
T Consensus 105 ~~~~~~~l~~~l~~~~~~~-~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~ftS 183 (248)
T COG1587 105 EDGDSEGLLEELPELLKGG-KRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVFTS 183 (248)
T ss_pred CccchHHHHHHhhhhccCC-CeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEEeC
Confidence 4567777877777777667 899987655543 6678888999988887643222222344444433 34566676665
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHh
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
+. .++.+..++.+.
T Consensus 184 ~~----------~v~~~~~~~~~~ 197 (248)
T COG1587 184 SS----------AVRALLALAPES 197 (248)
T ss_pred HH----------HHHHHHHHcccc
Confidence 42 367776666543
No 484
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=39.17 E-value=67 Score=30.65 Aligned_cols=72 Identities=18% Similarity=0.215 Sum_probs=49.8
Q ss_pred HHHHHHcCcEEEEeeccCCCC-----cccCHHHHHhhcCC-----CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhC
Q 021547 149 ESFAKRNHIEVRHFDLLPERG-----WEVDLEAVEALADE-----NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~-----~~~d~~~l~~~l~~-----~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
...++.+|+..+.+.+.++.+ +.+|.-.+++.+++ ++.++++... ..-.|+.- -+.+|.++|++++
T Consensus 246 hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD---mi~kildi~eaha 322 (838)
T KOG0630|consen 246 HYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND---MILKILDICEAHA 322 (838)
T ss_pred HHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH---HHHHHHHHHHHhh
Confidence 356788888766665544322 36788888887764 5667777665 45666653 3899999999987
Q ss_pred -CEEEEe
Q 021547 218 -ILVIAD 223 (311)
Q Consensus 218 -~~li~D 223 (311)
+|++.-
T Consensus 323 kfWLHas 329 (838)
T KOG0630|consen 323 KFWLHAS 329 (838)
T ss_pred heeEeec
Confidence 887654
No 485
>PRK14974 cell division protein FtsY; Provisional
Probab=39.03 E-value=1.7e+02 Score=26.51 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=54.4
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEe-cCCCCcc-----hHHHHHHcCcEEEEeeccCCCCcccCHH-----HHHhhcCCCc
Q 021547 117 LGCMEAVEIILTVITRLGAANILL-PRPGWPF-----YESFAKRNHIEVRHFDLLPERGWEVDLE-----AVEALADENT 185 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~-~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~-----~l~~~l~~~~ 185 (311)
+|=|..+..+...+.+.| -+|++ ..-.|.. +...+...|+.+.... .+.++. .++.....+.
T Consensus 151 vGKTTtiakLA~~l~~~g-~~V~li~~Dt~R~~a~eqL~~~a~~lgv~v~~~~------~g~dp~~v~~~ai~~~~~~~~ 223 (336)
T PRK14974 151 TGKTTTIAKLAYYLKKNG-FSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKHK------YGADPAAVAYDAIEHAKARGI 223 (336)
T ss_pred CCHHHHHHHHHHHHHHcC-CeEEEecCCcCcHHHHHHHHHHHHHcCCceeccc------CCCCHHHHHHHHHHHHHhCCC
Confidence 444666777777777777 56654 3334421 2345566666554321 112332 2232223345
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
..|++-+++.......-.++++++.+.+....++++.|...+
T Consensus 224 DvVLIDTaGr~~~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g 265 (336)
T PRK14974 224 DVVLIDTAGRMHTDANLMDELKKIVRVTKPDLVIFVGDALAG 265 (336)
T ss_pred CEEEEECCCccCCcHHHHHHHHHHHHhhCCceEEEeeccccc
Confidence 577777774332111223456666666666677777777654
No 486
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=38.99 E-value=94 Score=22.49 Aligned_cols=41 Identities=27% Similarity=0.405 Sum_probs=26.7
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
..+.+..++..+..+++++....|. +++.++|++.++.|+.
T Consensus 50 R~di~~~a~~~~i~~iIltg~~~~~---------~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 50 REDIQLAAIEAGIACIILTGGLEPS---------EEVLELAKELGIPVIS 90 (105)
T ss_dssp -HHHHHHHCCTTECEEEEETT-------------HHHHHHHHHHT-EEEE
T ss_pred cHHHHHHHHHhCCCEEEEeCCCCCC---------HHHHHHHHHCCCEEEE
Confidence 4566677777788888888644433 6777888888888775
No 487
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=38.25 E-value=61 Score=29.20 Aligned_cols=46 Identities=22% Similarity=0.282 Sum_probs=37.0
Q ss_pred cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
.+++.+.++ ..+.|+-.-++-|.|.+|+.+++.++.+..+.+|+..
T Consensus 14 v~l~~irQ~---Gv~gIV~aLh~iP~g~~W~~~~I~~~k~~ie~~Gl~~ 59 (362)
T COG1312 14 VTLEDIRQA---GVKGVVTALHHIPAGEVWPVEEILKRKEEIESAGLTW 59 (362)
T ss_pred ccHHHHHHh---CccceeccCCCCCCCCcCcHHHHHHHHHHHHHcCceE
Confidence 455555554 7778877778899999999999999999999998543
No 488
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=38.17 E-value=2.5e+02 Score=23.82 Aligned_cols=94 Identities=16% Similarity=0.110 Sum_probs=55.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH-HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
...+|++..||.-|..-+ ..|++.| ..|.+.+|...+-. ..++.-.++++ .- . .+.+++. +..+
T Consensus 24 ~~~~VLVVGGG~VA~RK~-~~Ll~~g-A~VtVVap~i~~el~~l~~~~~i~~~--~r----~--~~~~dl~-----g~~L 88 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKG-KTFLKKG-CYVYILSKKFSKEFLDLKKYGNLKLI--KG----N--YDKEFIK-----DKHL 88 (223)
T ss_pred CCCEEEEECCCHHHHHHH-HHHHhCC-CEEEEEcCCCCHHHHHHHhCCCEEEE--eC----C--CChHHhC-----CCcE
Confidence 455899999999887766 4555677 77888888876433 33332223332 21 1 2333432 3344
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE-Eecc
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVI-ADEV 225 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li-~D~a 225 (311)
++.++ + +.+--+++.+.|+++++++. +|+.
T Consensus 89 ViaAT-d-------D~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 89 IVIAT-D-------DEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred EEECC-C-------CHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 44443 3 33456889999999876554 5654
No 489
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=38.13 E-value=33 Score=30.94 Aligned_cols=68 Identities=19% Similarity=0.382 Sum_probs=41.3
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.......+.+...+.+.+..+|.+....+.++-.... ..++.+ |..++.+++++|++.|+++||-||-
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGA-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCc-----cccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 4556667888888888776666665433332211100 000013 4489999999999999999988774
No 490
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=37.86 E-value=2.7e+02 Score=24.19 Aligned_cols=96 Identities=22% Similarity=0.255 Sum_probs=57.0
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEec---CCCCcc-----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLP---RPGWPF-----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~---~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
++..+||..+-.++..+.-.-| ++|+.. .|.-+. -...++..|++-..+++.. ++ ..+.
T Consensus 21 ~vAfSGGvDSslLa~la~~~lG-~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~-----~~-~~~~------ 87 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEALG-DNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNR-----MD-PEFK------ 87 (269)
T ss_pred EEEecCCccHHHHHHHHHHHhc-cceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhh-----cc-hhhc------
Confidence 3445666655555444444456 665532 344432 3567888898888877632 22 1111
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
.||.|++ ...-.+-...|.++++++|.-+|.|.+-+.
T Consensus 88 ------~n~~~rC-Y~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 88 ------ENPENRC-YLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred ------cCCCCcc-hHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 1222222 233455578899999999999999998764
No 491
>PLN00196 alpha-amylase; Provisional
Probab=37.79 E-value=39 Score=31.77 Aligned_cols=29 Identities=31% Similarity=0.382 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-+.-+..
T Consensus 90 t~~elk~Lv~~aH~~GIkVilDvV~NH~~ 118 (428)
T PLN00196 90 NEAQLKSLIEAFHGKGVQVIADIVINHRT 118 (428)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCcc
Confidence 46789999999999999999999987654
No 492
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=37.74 E-value=3e+02 Score=24.67 Aligned_cols=106 Identities=14% Similarity=0.168 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhcCCCCEEEe-cCCCCcc-----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 120 MEAVEIILTVITRLGAANILL-PRPGWPF-----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~-~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
|..+..+...+...| .+|++ ....|.. ...+....++.++..+... +....-.+.+......+...+++-+|
T Consensus 128 TTt~~kLA~~l~~~g-~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~~~-dpa~~v~~~l~~~~~~~~D~ViIDTa 205 (318)
T PRK10416 128 TTTIGKLAHKYKAQG-KKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKEGA-DPASVAFDAIQAAKARGIDVLIIDTA 205 (318)
T ss_pred HHHHHHHHHHHHhcC-CeEEEEecCccchhhHHHHHHHHHHcCceEEEeCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 444555555555566 55654 3344432 3445666776655443211 00001124444445566778888877
Q ss_pred C-CCCccCCCHHHHHHHHHHHH------HhCCEEEEeccccC
Q 021547 194 C-NPCGNVLTYQHLQKIAETAR------KLGILVIADEVYGH 228 (311)
Q Consensus 194 ~-nptG~~~~~~~l~~l~~l~~------~~~~~li~D~ay~~ 228 (311)
. .+.-. .-.++++++.+++. .+..++++|...+.
T Consensus 206 Gr~~~~~-~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~ 246 (318)
T PRK10416 206 GRLHNKT-NLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQ 246 (318)
T ss_pred CCCcCCH-HHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCh
Confidence 4 33211 12246777777664 34678888888543
No 493
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=37.65 E-value=3e+02 Score=24.52 Aligned_cols=56 Identities=18% Similarity=0.141 Sum_probs=36.9
Q ss_pred ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
.++.+.+.+.+......-++..+..+ +..++.+.++++++..++.-=++|+|-.-.
T Consensus 160 ~~~~~~l~~~~~~~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p~~ 215 (322)
T TIGR03815 160 RLPAGALRDALPRRGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLPRR 215 (322)
T ss_pred CcCHHHHHHhCCCcCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCCCC
Confidence 45666676666543344466655443 345777888888888776555899998855
No 494
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=37.22 E-value=82 Score=26.61 Aligned_cols=48 Identities=19% Similarity=0.369 Sum_probs=29.3
Q ss_pred cCH-HHHHhhcCCCccEEEEeCCCCCCccC-CCHHHH---HHHHHHHHHhCCEE
Q 021547 172 VDL-EAVEALADENTAAIVIINPCNPCGNV-LTYQHL---QKIAETARKLGILV 220 (311)
Q Consensus 172 ~d~-~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l---~~l~~l~~~~~~~l 220 (311)
+++ +-++.++..+...+++++ |.|.|.. .|.+++ ++|.+.|+--|+.+
T Consensus 146 v~pReI~~~Al~~~A~~vIlaH-NHPSG~~~PS~~Di~~T~~l~~a~~~lgI~l 198 (218)
T TIGR00608 146 VHPREIFKEALKLSASALILAH-NHPSGEPSPSQEDILITERLRKAAELLGIEL 198 (218)
T ss_pred EcHHHHHHHHHHhhCCeEEEEe-ecCCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 344 445668888888887776 4566664 445554 56666666655443
No 495
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=37.18 E-value=2.3e+02 Score=24.70 Aligned_cols=54 Identities=24% Similarity=0.380 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 120 MEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 120 ~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
.+.+..++..+. .|+...|-+.+..|++|..++.+.|+-.. .|.+...+.+++|
T Consensus 212 ~eilE~LmN~l~~~p~DpYv~i~~~~WPpyie~LlR~GIa~r----HP~D~~kIRL~~F 266 (268)
T PF11802_consen 212 REILEILMNKLLDSPHDPYVKIDDSFWPPYIELLLRSGIALR----HPEDPSKIRLEDF 266 (268)
T ss_pred HHHHHHHHHHhcCCCCCCceecCcccChHHHHHHHHcCCeee----CCCCcccccchhc
Confidence 445566666666 46623566777779999999999997654 3445555655544
No 496
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=37.15 E-value=4.2e+02 Score=26.11 Aligned_cols=100 Identities=17% Similarity=0.092 Sum_probs=55.5
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEec-CCCCcc------hHHHHHHcCc-EE-EEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 117 LGCMEAVEIILTVITRLGAANILLP-RPGWPF------YESFAKRNHI-EV-RHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~------~~~~~~~~g~-~~-~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
.+-..|...+..++.+.. +|++. +..-.+ ....++..|. .+ ..+|---.++++++.+.+++....+..+
T Consensus 53 ~~m~~a~~ri~~ai~~~e--~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~L 130 (575)
T PRK11070 53 SGIEKAVELLYNALREGT--RIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQL 130 (575)
T ss_pred hCHHHHHHHHHHHHHCCC--EEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCE
Confidence 445555555555553322 33332 222221 1234455565 23 3344333678999999999987767777
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
++.+... ++ + .+ -++.|+++|+-+|+=|=|.
T Consensus 131 iItvD~G--i~---~---~e-~i~~a~~~gidvIVtDHH~ 161 (575)
T PRK11070 131 IVTVDNG--IS---S---HA-GVAHAHALGIPVLVTDHHL 161 (575)
T ss_pred EEEEcCC--cC---C---HH-HHHHHHHCCCCEEEECCCC
Confidence 7666532 21 1 33 3456888898777766553
No 497
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=36.77 E-value=2e+02 Score=25.37 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=21.1
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF 147 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~ 147 (311)
.|++..|+ .+++..+-. ..+.|.|.|++..|.|..
T Consensus 71 pvi~gv~~~~t~~ai~~a~~-A~~~Gad~v~v~pP~y~~ 108 (294)
T TIGR02313 71 PFAPGTGALNHDETLELTKF-AEEAGADAAMVIVPYYNK 108 (294)
T ss_pred cEEEECCcchHHHHHHHHHH-HHHcCCCEEEEcCccCCC
Confidence 35554443 234444333 345787999999998864
No 498
>PRK13937 phosphoheptose isomerase; Provisional
Probab=36.65 E-value=2.3e+02 Score=23.02 Aligned_cols=36 Identities=28% Similarity=0.328 Sum_probs=24.6
Q ss_pred hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 180 LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 180 ~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.++++.-+++++...+. .++.+.++.|+++|+.+|.
T Consensus 103 ~~~~~Dl~i~iS~sG~t-------~~~~~~~~~ak~~g~~~I~ 138 (188)
T PRK13937 103 LGRPGDVLIGISTSGNS-------PNVLAALEKARELGMKTIG 138 (188)
T ss_pred hCCCCCEEEEEeCCCCc-------HHHHHHHHHHHHCCCeEEE
Confidence 45566666676665432 2589999999999876653
No 499
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=36.16 E-value=3.2e+02 Score=24.41 Aligned_cols=80 Identities=13% Similarity=0.036 Sum_probs=51.8
Q ss_pred EecCCCCcchHHHHHH--cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC-CCccCCCHHHHHHHHHHHHH
Q 021547 139 LLPRPGWPFYESFAKR--NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN-PCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 139 l~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~~ 215 (311)
+.-.|+|....+.... ..+-++.+|. ..-++.++++...+.+.+++.+.+. .+| ..+.+.+++++
T Consensus 52 i~G~~~y~sv~dlp~~~~~DlAvI~vPa------~~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ar~ 119 (300)
T PLN00125 52 HLGLPVFNTVAEAKAETKANASVIYVPP------PFAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNRQ 119 (300)
T ss_pred EcCeeccCCHHHHhhccCCCEEEEecCH------HHHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHHHhh
Confidence 3456777777766654 2444555543 1346777888888899887776554 333 24555567899
Q ss_pred hCCEEEEeccccCCc
Q 021547 216 LGILVIADEVYGHLA 230 (311)
Q Consensus 216 ~~~~li~D~ay~~~~ 230 (311)
+++.++==++.+.+.
T Consensus 120 ~girviGPNc~Gii~ 134 (300)
T PLN00125 120 SKTRLIGPNCPGIIK 134 (300)
T ss_pred cCCEEECCCCceeec
Confidence 999988777776544
No 500
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=36.15 E-value=67 Score=31.26 Aligned_cols=29 Identities=34% Similarity=0.557 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+-||.|-+|..+.
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 46899999999999999999999998653
Done!