Query 021547
Match_columns 311
No_of_seqs 172 out of 1872
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 05:43:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 6.1E-42 2.1E-46 318.2 28.8 296 5-309 20-315 (427)
2 1b5p_A Protein (aspartate amin 100.0 4.7E-41 1.6E-45 308.0 31.2 270 23-310 11-281 (385)
3 1bw0_A TAT, protein (tyrosine 100.0 1.4E-39 4.8E-44 300.9 29.3 292 8-309 3-304 (416)
4 3aow_A Putative uncharacterize 100.0 8.9E-40 3.1E-44 305.5 25.0 279 6-310 47-335 (448)
5 3k7y_A Aspartate aminotransfer 100.0 3.5E-39 1.2E-43 297.3 28.2 277 23-310 11-303 (405)
6 3ele_A Amino transferase; RER0 100.0 9.9E-39 3.4E-43 293.4 29.3 287 12-310 3-302 (398)
7 3fvs_A Kynurenine--oxoglutarat 100.0 1.7E-39 5.7E-44 300.8 24.2 274 13-309 6-293 (422)
8 1gd9_A Aspartate aminotransfer 100.0 3.1E-38 1E-42 289.3 29.3 275 13-310 3-280 (389)
9 3e2y_A Kynurenine-oxoglutarate 100.0 5.6E-39 1.9E-43 296.0 24.3 254 43-309 21-286 (410)
10 1j32_A Aspartate aminotransfer 100.0 2.1E-38 7.1E-43 290.3 27.2 253 43-309 28-283 (388)
11 2x5d_A Probable aminotransfera 100.0 3.4E-38 1.2E-42 291.4 28.3 255 43-310 35-292 (412)
12 3b46_A Aminotransferase BNA3; 100.0 7.9E-39 2.7E-43 299.0 24.0 255 43-310 55-322 (447)
13 4f4e_A Aromatic-amino-acid ami 100.0 1.4E-38 4.9E-43 294.8 24.4 280 23-310 31-323 (420)
14 3jtx_A Aminotransferase; NP_28 100.0 4.5E-38 1.5E-42 288.7 26.7 272 23-310 9-292 (396)
15 1o4s_A Aspartate aminotransfer 100.0 7.9E-38 2.7E-42 287.0 27.9 271 23-310 21-293 (389)
16 3h14_A Aminotransferase, class 100.0 5.9E-38 2E-42 287.7 26.7 263 25-309 13-276 (391)
17 7aat_A Aspartate aminotransfer 100.0 1.1E-37 3.7E-42 286.9 25.0 280 24-309 11-303 (401)
18 2o0r_A RV0858C (N-succinyldiam 100.0 2.5E-37 8.5E-42 285.5 27.0 252 45-310 25-280 (411)
19 2r2n_A Kynurenine/alpha-aminoa 100.0 1.2E-37 4E-42 289.2 24.9 273 9-310 3-309 (425)
20 3tcm_A Alanine aminotransferas 100.0 3.6E-37 1.2E-41 291.6 28.5 259 45-309 64-366 (500)
21 1xi9_A Putative transaminase; 100.0 1.8E-37 6.2E-42 286.0 25.2 258 43-309 36-296 (406)
22 2dou_A Probable N-succinyldiam 100.0 9.9E-38 3.4E-42 284.7 22.5 253 43-310 23-277 (376)
23 3fsl_A Aromatic-amino-acid ami 100.0 4.2E-37 1.4E-41 282.3 25.2 275 24-310 9-301 (397)
24 3g0t_A Putative aminotransfera 100.0 1.9E-37 6.5E-42 288.2 23.1 272 24-310 24-325 (437)
25 1yiz_A Kynurenine aminotransfe 100.0 3E-37 1E-41 286.4 24.2 253 45-310 37-302 (429)
26 3ihj_A Alanine aminotransferas 100.0 2.4E-37 8.2E-42 292.6 23.7 259 45-309 63-365 (498)
27 1u08_A Hypothetical aminotrans 100.0 5.9E-37 2E-41 280.5 25.4 251 45-310 30-283 (386)
28 3fdb_A Beta C-S lyase, putativ 100.0 1.4E-37 4.6E-42 283.5 20.6 249 43-310 21-271 (377)
29 3nra_A Aspartate aminotransfer 100.0 3.7E-37 1.3E-41 283.4 23.0 253 46-310 40-300 (407)
30 2zc0_A Alanine glyoxylate tran 100.0 3E-36 1E-40 277.7 28.6 281 9-310 3-293 (407)
31 3t18_A Aminotransferase class 100.0 8.7E-38 3E-42 288.7 17.9 279 23-310 15-315 (413)
32 3ezs_A Aminotransferase ASPB; 100.0 2.6E-37 8.9E-42 281.7 20.8 247 46-310 24-278 (376)
33 3kax_A Aminotransferase, class 100.0 8E-37 2.7E-41 278.9 24.0 253 43-310 22-279 (383)
34 3dzz_A Putative pyridoxal 5'-p 100.0 1.7E-36 6E-41 277.3 25.8 253 43-310 25-283 (391)
35 2o1b_A Aminotransferase, class 100.0 3.3E-37 1.1E-41 284.3 20.6 253 43-310 45-300 (404)
36 2z61_A Probable aspartate amin 100.0 9.1E-36 3.1E-40 271.1 29.4 258 23-309 9-268 (370)
37 1vp4_A Aminotransferase, putat 100.0 2.8E-37 9.7E-42 286.5 18.8 252 44-310 42-306 (425)
38 1c7n_A Cystalysin; transferase 100.0 1.3E-36 4.4E-41 279.4 22.8 251 45-310 31-287 (399)
39 3qgu_A LL-diaminopimelate amin 100.0 1.2E-35 4.2E-40 277.3 28.9 256 42-310 66-337 (449)
40 3rq1_A Aminotransferase class 100.0 4.6E-37 1.6E-41 284.3 18.3 290 9-310 5-316 (418)
41 4dq6_A Putative pyridoxal phos 100.0 5.5E-36 1.9E-40 274.0 24.9 252 43-310 30-287 (391)
42 2gb3_A Aspartate aminotransfer 100.0 7.9E-36 2.7E-40 275.4 24.8 273 14-310 17-291 (409)
43 1d2f_A MALY protein; aminotran 100.0 1E-35 3.5E-40 272.7 23.3 250 44-309 27-282 (390)
44 2q7w_A Aspartate aminotransfer 100.0 3.7E-36 1.3E-40 275.9 20.2 263 44-310 25-300 (396)
45 1v2d_A Glutamine aminotransfer 100.0 1.9E-35 6.3E-40 270.2 24.7 242 45-309 25-268 (381)
46 4eu1_A Mitochondrial aspartate 100.0 2.4E-36 8.4E-41 278.7 18.7 276 23-310 23-312 (409)
47 1iay_A ACC synthase 2, 1-amino 100.0 7.3E-36 2.5E-40 277.1 21.7 252 45-310 36-314 (428)
48 1ajs_A Aspartate aminotransfer 100.0 1.3E-35 4.3E-40 274.0 23.0 281 23-310 12-312 (412)
49 3l8a_A METC, putative aminotra 100.0 1.7E-35 6E-40 274.2 23.8 251 44-309 60-316 (421)
50 1yaa_A Aspartate aminotransfer 100.0 5E-36 1.7E-40 276.8 20.0 278 25-310 13-312 (412)
51 3ei9_A LL-diaminopimelate amin 100.0 5.8E-35 2E-39 271.4 27.1 269 27-309 38-324 (432)
52 2zyj_A Alpha-aminodipate amino 100.0 4.5E-36 1.5E-40 275.8 18.7 271 9-310 6-284 (397)
53 3meb_A Aspartate aminotransfer 100.0 1.3E-35 4.4E-40 277.4 21.7 277 23-310 31-339 (448)
54 2x5f_A Aspartate_tyrosine_phen 100.0 1.7E-36 5.8E-41 281.5 14.5 254 44-309 46-324 (430)
55 3ly1_A Putative histidinol-pho 100.0 2.6E-35 8.8E-40 266.4 21.5 243 42-310 13-258 (354)
56 3piu_A 1-aminocyclopropane-1-c 100.0 2.1E-35 7.2E-40 274.7 20.9 254 43-310 36-319 (435)
57 3ffh_A Histidinol-phosphate am 100.0 1.1E-34 3.9E-39 263.1 23.8 241 43-310 30-270 (363)
58 3get_A Histidinol-phosphate am 100.0 4.7E-35 1.6E-39 265.9 21.1 242 43-310 28-272 (365)
59 2ay1_A Aroat, aromatic amino a 100.0 2.7E-35 9.2E-40 270.1 19.6 277 23-310 8-297 (394)
60 3asa_A LL-diaminopimelate amin 100.0 2.4E-34 8.3E-39 264.7 25.5 267 29-310 17-291 (400)
61 4h51_A Aspartate aminotransfer 100.0 1.9E-34 6.5E-39 266.2 23.0 279 22-310 26-319 (420)
62 3if2_A Aminotransferase; YP_26 100.0 1.5E-34 5.2E-39 269.4 20.9 281 11-310 2-322 (444)
63 1lc5_A COBD, L-threonine-O-3-p 100.0 1.8E-33 6E-38 255.6 26.3 240 43-310 22-262 (364)
64 3euc_A Histidinol-phosphate am 100.0 1E-33 3.6E-38 257.2 23.6 241 43-310 28-271 (367)
65 3g7q_A Valine-pyruvate aminotr 100.0 2E-34 6.7E-39 266.2 18.7 268 23-310 12-296 (417)
66 3ftb_A Histidinol-phosphate am 100.0 2.5E-33 8.4E-38 253.9 24.7 238 43-310 24-261 (361)
67 3b1d_A Betac-S lyase; HET: PLP 100.0 5E-37 1.7E-41 281.8 0.0 251 45-310 31-287 (392)
68 3d6k_A Putative aminotransfera 100.0 2.3E-34 7.9E-39 266.8 16.8 245 46-310 33-304 (422)
69 3ppl_A Aspartate aminotransfer 100.0 3.4E-34 1.2E-38 265.9 17.4 247 44-310 32-306 (427)
70 1fg7_A Histidinol phosphate am 100.0 4.2E-33 1.4E-37 252.7 23.0 231 45-310 29-259 (356)
71 3cq5_A Histidinol-phosphate am 100.0 1.3E-32 4.3E-37 250.5 25.7 241 47-310 32-276 (369)
72 2zy4_A L-aspartate beta-decarb 100.0 2.5E-33 8.5E-38 267.5 19.5 235 26-273 81-332 (546)
73 3ez1_A Aminotransferase MOCR f 100.0 1.7E-33 5.8E-38 260.7 17.5 246 45-310 25-299 (423)
74 3op7_A Aminotransferase class 100.0 1.7E-32 5.7E-37 249.9 22.0 221 70-309 47-268 (375)
75 3p1t_A Putative histidinol-pho 100.0 1.3E-31 4.5E-36 240.3 25.1 230 43-310 14-243 (337)
76 3fkd_A L-threonine-O-3-phospha 100.0 3.2E-32 1.1E-36 245.9 21.0 229 43-310 13-242 (350)
77 3f6t_A Aspartate aminotransfer 100.0 2.4E-32 8.1E-37 260.4 18.6 215 46-273 104-330 (533)
78 3hdo_A Histidinol-phosphate am 100.0 1.9E-31 6.6E-36 241.8 23.7 234 43-310 24-259 (360)
79 1uu1_A Histidinol-phosphate am 100.0 1.4E-31 4.8E-36 240.5 19.3 229 45-310 19-247 (335)
80 3bwn_A AT1G70560, L-tryptophan 100.0 1.4E-32 4.7E-37 252.5 9.9 232 43-310 20-265 (391)
81 2hox_A ALLIIN lyase 1; cystein 100.0 3.8E-31 1.3E-35 245.6 12.9 230 44-310 55-299 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 2.2E-28 7.7E-33 224.4 21.7 237 44-309 42-288 (398)
83 1e5e_A MGL, methionine gamma-l 100.0 1.7E-27 5.9E-32 219.5 24.7 223 47-309 20-258 (404)
84 1t3i_A Probable cysteine desul 99.9 6.2E-27 2.1E-31 215.7 19.5 213 44-289 26-254 (420)
85 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.8E-27 9.6E-32 214.7 16.7 205 44-272 6-224 (371)
86 1bs0_A Protein (8-amino-7-oxon 99.9 6.4E-26 2.2E-30 207.0 22.7 230 44-309 38-281 (384)
87 1eg5_A Aminotransferase; PLP-d 99.9 3.7E-26 1.3E-30 208.0 21.0 230 48-309 3-252 (384)
88 1vjo_A Alanine--glyoxylate ami 99.9 1.9E-26 6.6E-31 211.0 18.5 219 61-309 43-286 (393)
89 2rfv_A Methionine gamma-lyase; 99.9 1.2E-25 4.2E-30 206.5 22.3 227 48-309 23-259 (398)
90 3tqx_A 2-amino-3-ketobutyrate 99.9 6.1E-26 2.1E-30 207.8 20.2 234 44-309 42-291 (399)
91 2dr1_A PH1308 protein, 386AA l 99.9 1.6E-25 5.3E-30 204.1 21.8 219 62-309 30-271 (386)
92 1kmj_A Selenocysteine lyase; p 99.9 3.6E-26 1.2E-30 209.6 17.4 213 44-289 21-249 (406)
93 1elu_A L-cysteine/L-cystine C- 99.9 2.2E-26 7.5E-31 210.0 15.8 205 45-272 15-235 (390)
94 4adb_A Succinylornithine trans 99.9 3.9E-26 1.3E-30 209.8 17.0 236 43-309 37-297 (406)
95 2po3_A 4-dehydrase; external a 99.9 3.4E-25 1.2E-29 205.1 22.8 211 42-290 11-225 (424)
96 2eh6_A Acoat, acetylornithine 99.9 5.7E-26 2E-30 206.5 17.3 237 43-309 26-286 (375)
97 2w8t_A SPT, serine palmitoyltr 99.9 3.9E-25 1.3E-29 205.1 23.0 233 44-309 63-309 (427)
98 3lvm_A Cysteine desulfurase; s 99.9 3.6E-25 1.2E-29 204.5 20.7 206 42-273 18-240 (423)
99 2ord_A Acoat, acetylornithine 99.9 1E-25 3.5E-30 206.7 16.9 238 43-309 38-296 (397)
100 1sff_A 4-aminobutyrate aminotr 99.9 8.2E-26 2.8E-30 209.1 16.3 245 43-309 39-313 (426)
101 3f9t_A TDC, L-tyrosine decarbo 99.9 3.9E-25 1.3E-29 201.7 19.7 201 61-273 40-262 (397)
102 1fc4_A 2-amino-3-ketobutyrate 99.9 4.1E-25 1.4E-29 202.8 19.7 233 43-309 43-293 (401)
103 1ibj_A CBL, cystathionine beta 99.9 1.2E-25 4E-30 210.5 14.8 228 45-309 89-326 (464)
104 3kki_A CAI-1 autoinducer synth 99.9 1.8E-24 6.2E-29 199.2 22.4 204 43-272 57-269 (409)
105 2bwn_A 5-aminolevulinate synth 99.9 8.1E-25 2.8E-29 200.9 18.8 233 44-309 45-293 (401)
106 2aeu_A Hypothetical protein MJ 99.9 1.6E-24 5.4E-29 197.7 20.4 220 44-309 26-252 (374)
107 1svv_A Threonine aldolase; str 99.9 1.5E-24 5.1E-29 195.5 19.4 208 44-271 12-229 (359)
108 3ruy_A Ornithine aminotransfer 99.9 1.1E-24 3.8E-29 199.4 18.4 238 43-309 34-297 (392)
109 1jg8_A L-ALLO-threonine aldola 99.9 4.3E-25 1.5E-29 198.7 14.9 232 44-308 2-248 (347)
110 3a9z_A Selenocysteine lyase; P 99.9 2.1E-24 7.3E-29 200.0 19.8 202 44-273 16-261 (432)
111 3cai_A Possible aminotransfera 99.9 1.4E-24 4.9E-29 199.4 18.3 210 46-289 26-250 (406)
112 1b9h_A AHBA synthase, protein 99.9 5.4E-24 1.8E-28 194.6 22.0 185 65-273 17-203 (388)
113 2eo5_A 419AA long hypothetical 99.9 2.3E-24 7.8E-29 199.4 18.8 249 43-309 40-325 (419)
114 2oga_A Transaminase; PLP-depen 99.9 1.6E-24 5.4E-29 199.1 17.4 224 45-308 30-270 (399)
115 3i4j_A Aminotransferase, class 99.9 1.8E-24 6.1E-29 200.6 17.6 249 43-309 27-311 (430)
116 2huf_A Alanine glyoxylate amin 99.9 1.7E-24 5.7E-29 198.0 16.2 207 43-288 16-229 (393)
117 2z9v_A Aspartate aminotransfer 99.9 2.1E-24 7.2E-29 197.2 16.7 206 46-287 8-218 (392)
118 4eb5_A Probable cysteine desul 99.9 6.2E-24 2.1E-28 193.2 19.7 190 62-273 11-214 (382)
119 3dxv_A Alpha-amino-epsilon-cap 99.9 6.6E-24 2.3E-28 197.3 19.2 246 43-309 41-314 (439)
120 2pb2_A Acetylornithine/succiny 99.9 5.2E-24 1.8E-28 197.1 18.2 239 43-309 55-315 (420)
121 1vef_A Acetylornithine/acetyl- 99.9 2.9E-24 1E-28 196.8 16.2 237 43-309 43-299 (395)
122 2ch1_A 3-hydroxykynurenine tra 99.9 3.8E-24 1.3E-28 195.8 16.9 188 61-272 27-220 (396)
123 2ez2_A Beta-tyrosinase, tyrosi 99.9 1E-23 3.5E-28 196.9 19.4 202 62-289 55-281 (456)
124 1s0a_A Adenosylmethionine-8-am 99.9 1.7E-23 5.8E-28 194.0 20.4 244 43-309 41-325 (429)
125 4hvk_A Probable cysteine desul 99.9 2.3E-23 8E-28 189.0 20.8 191 61-273 10-214 (382)
126 3nx3_A Acoat, acetylornithine 99.9 1.7E-23 5.9E-28 191.7 20.0 238 43-309 34-294 (395)
127 1iug_A Putative aspartate amin 99.9 7.1E-24 2.4E-28 190.7 16.7 187 61-272 10-200 (352)
128 1v72_A Aldolase; PLP-dependent 99.9 1.1E-23 3.7E-28 189.8 17.0 203 44-270 6-224 (356)
129 3acz_A Methionine gamma-lyase; 99.9 3.9E-23 1.3E-27 189.4 20.8 190 86-309 58-253 (389)
130 3nyt_A Aminotransferase WBPE; 99.9 1.1E-23 3.9E-28 191.2 16.6 195 62-290 13-211 (367)
131 3qhx_A Cystathionine gamma-syn 99.9 5.8E-23 2E-27 188.4 21.4 189 87-309 66-260 (392)
132 2c81_A Glutamine-2-deoxy-scyll 99.9 4.3E-23 1.5E-27 190.6 20.5 195 63-289 14-216 (418)
133 1gc0_A Methionine gamma-lyase; 99.9 2.3E-23 7.8E-28 191.5 18.2 225 50-309 26-260 (398)
134 4ffc_A 4-aminobutyrate aminotr 99.9 2E-23 7E-28 195.0 18.1 250 43-309 62-339 (453)
135 1zod_A DGD, 2,2-dialkylglycine 99.9 1.3E-23 4.4E-28 195.0 16.5 248 43-309 41-319 (433)
136 1m32_A 2-aminoethylphosphonate 99.9 7.3E-24 2.5E-28 191.4 14.3 199 46-272 4-208 (366)
137 3vax_A Putative uncharacterize 99.9 1.5E-23 5.2E-28 192.0 16.6 202 44-272 18-235 (400)
138 3uwc_A Nucleotide-sugar aminot 99.9 4.4E-23 1.5E-27 187.4 19.3 204 44-289 5-212 (374)
139 3n5m_A Adenosylmethionine-8-am 99.9 4.2E-23 1.4E-27 192.7 18.8 245 43-309 47-336 (452)
140 1mdo_A ARNB aminotransferase; 99.9 5.5E-23 1.9E-27 188.0 19.1 202 46-289 9-212 (393)
141 3dr4_A Putative perosamine syn 99.9 8.5E-23 2.9E-27 186.9 20.3 209 43-290 20-231 (391)
142 1pff_A Methionine gamma-lyase; 99.9 4.1E-23 1.4E-27 184.7 17.8 184 91-308 2-193 (331)
143 3zrp_A Serine-pyruvate aminotr 99.9 1E-23 3.5E-28 191.8 13.6 191 61-272 11-204 (384)
144 3mc6_A Sphingosine-1-phosphate 99.9 1.5E-22 5.1E-27 191.2 21.9 206 61-272 74-295 (497)
145 3cog_A Cystathionine gamma-lya 99.9 4.4E-23 1.5E-27 189.9 17.8 188 87-309 67-261 (403)
146 3l44_A Glutamate-1-semialdehyd 99.9 1.9E-23 6.5E-28 193.9 15.0 243 43-309 53-318 (434)
147 3ndn_A O-succinylhomoserine su 99.9 1.2E-22 4.2E-27 187.5 20.3 185 88-307 82-273 (414)
148 2yrr_A Aminotransferase, class 99.9 8.9E-24 3E-28 189.9 12.2 188 61-272 9-201 (353)
149 3nnk_A Ureidoglycine-glyoxylat 99.9 4.6E-23 1.6E-27 189.4 17.0 207 44-288 11-223 (411)
150 1cs1_A CGS, protein (cystathio 99.9 1.2E-22 4.2E-27 185.7 19.7 189 86-308 51-245 (386)
151 3f0h_A Aminotransferase; RER07 99.9 1.2E-22 4E-27 184.6 19.2 209 45-288 18-229 (376)
152 1ax4_A Tryptophanase; tryptoph 99.9 9.8E-23 3.4E-27 190.7 19.1 215 44-273 33-281 (467)
153 4a6r_A Omega transaminase; tra 99.9 5.3E-23 1.8E-27 192.5 16.7 250 43-309 48-337 (459)
154 1n8p_A Cystathionine gamma-lya 99.9 3.5E-23 1.2E-27 189.9 15.2 186 87-308 55-250 (393)
155 2oat_A Ornithine aminotransfer 99.9 3.1E-22 1.1E-26 186.2 21.6 236 43-309 74-338 (439)
156 1z7d_A Ornithine aminotransfer 99.9 9E-23 3.1E-27 189.5 17.8 236 43-309 63-327 (433)
157 3oks_A 4-aminobutyrate transam 99.9 5.6E-23 1.9E-27 191.9 15.6 250 43-309 59-341 (451)
158 2cb1_A O-acetyl homoserine sul 99.9 8.2E-22 2.8E-26 181.9 23.2 182 61-273 32-219 (412)
159 3a8u_X Omega-amino acid--pyruv 99.9 1E-22 3.5E-27 189.9 17.3 246 43-309 48-343 (449)
160 2cy8_A D-phgat, D-phenylglycin 99.9 7.4E-23 2.5E-27 191.1 16.0 234 43-309 55-319 (453)
161 3gju_A Putative aminotransfera 99.9 1.9E-22 6.4E-27 188.8 18.7 251 43-309 49-343 (460)
162 3isl_A Purine catabolism prote 99.9 2.6E-22 9E-27 184.6 18.9 199 44-272 9-213 (416)
163 2bkw_A Alanine-glyoxylate amin 99.9 8.8E-23 3E-27 185.8 15.6 202 45-272 4-216 (385)
164 3ffr_A Phosphoserine aminotran 99.9 3.3E-22 1.1E-26 180.4 18.5 199 46-272 4-206 (362)
165 3kgw_A Alanine-glyoxylate amin 99.9 1.2E-22 4.2E-27 185.2 15.9 197 61-288 32-233 (393)
166 3dod_A Adenosylmethionine-8-am 99.9 1.7E-22 5.8E-27 188.4 16.9 247 43-309 42-333 (448)
167 2dkj_A Serine hydroxymethyltra 99.9 5.2E-23 1.8E-27 188.9 13.2 218 44-290 22-251 (407)
168 3mad_A Sphingosine-1-phosphate 99.9 3.5E-22 1.2E-26 189.5 19.1 184 82-272 130-327 (514)
169 3frk_A QDTB; aminotransferase, 99.9 6.6E-22 2.2E-26 179.8 20.1 194 63-290 15-212 (373)
170 1o69_A Aminotransferase; struc 99.9 8.9E-22 3E-26 180.5 21.0 191 64-289 11-208 (394)
171 3i5t_A Aminotransferase; pyrid 99.9 3.2E-22 1.1E-26 188.0 18.2 249 43-309 52-344 (476)
172 2dgk_A GAD-beta, GADB, glutama 99.9 2.7E-21 9.3E-26 180.5 23.8 203 61-273 52-278 (452)
173 3tfu_A Adenosylmethionine-8-am 99.9 9E-23 3.1E-27 190.8 13.2 250 43-309 71-354 (457)
174 2fnu_A Aminotransferase; prote 99.9 2.2E-21 7.5E-26 176.0 21.7 193 62-289 10-207 (375)
175 3n0l_A Serine hydroxymethyltra 99.9 1.7E-22 5.8E-27 186.1 14.1 214 46-290 26-252 (417)
176 2fq6_A Cystathionine beta-lyas 99.9 3.4E-21 1.2E-25 177.8 22.2 183 87-304 82-272 (415)
177 3k28_A Glutamate-1-semialdehyd 99.9 1.7E-22 5.7E-27 187.4 13.5 243 43-310 51-317 (429)
178 3fq8_A Glutamate-1-semialdehyd 99.9 3.2E-22 1.1E-26 185.3 15.0 236 43-309 50-315 (427)
179 1qz9_A Kynureninase; kynurenin 99.9 1.3E-21 4.5E-26 180.2 19.0 196 45-273 27-244 (416)
180 2epj_A Glutamate-1-semialdehyd 99.9 6.5E-22 2.2E-26 183.6 16.5 234 43-309 54-319 (434)
181 3pj0_A LMO0305 protein; struct 99.9 2.8E-22 9.7E-27 181.0 13.6 212 44-289 12-231 (359)
182 1wyu_B Glycine dehydrogenase s 99.9 2.9E-21 9.8E-26 181.5 20.8 204 46-272 67-286 (474)
183 2e7u_A Glutamate-1-semialdehyd 99.9 8.1E-22 2.8E-26 182.4 16.8 234 43-309 50-314 (424)
184 3hmu_A Aminotransferase, class 99.9 1.2E-21 4E-26 184.0 17.6 251 42-309 52-340 (472)
185 3ju7_A Putative PLP-dependent 99.9 1.6E-21 5.6E-26 177.9 17.3 198 60-290 11-216 (377)
186 1w23_A Phosphoserine aminotran 99.9 9.8E-23 3.4E-27 184.0 8.8 197 46-272 3-210 (360)
187 3lws_A Aromatic amino acid bet 99.9 6.6E-22 2.3E-26 178.6 14.0 181 81-289 41-229 (357)
188 3ri6_A O-acetylhomoserine sulf 99.9 5.4E-21 1.9E-25 177.1 20.3 158 87-271 82-243 (430)
189 3jzl_A Putative cystathionine 99.9 4.8E-21 1.7E-25 176.2 19.6 195 65-289 32-253 (409)
190 1qgn_A Protein (cystathionine 99.9 7.4E-21 2.5E-25 176.8 20.9 186 88-308 115-307 (445)
191 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.5E-20 8.6E-25 173.1 23.9 194 44-272 30-234 (437)
192 3i16_A Aluminum resistance pro 99.9 3.3E-21 1.1E-25 177.9 17.8 195 65-289 46-270 (427)
193 2c0r_A PSAT, phosphoserine ami 99.9 4.6E-22 1.6E-26 180.1 11.4 223 46-309 4-253 (362)
194 3hvy_A Cystathionine beta-lyas 99.9 4.3E-21 1.5E-25 177.2 17.8 194 65-289 47-270 (427)
195 1rv3_A Serine hydroxymethyltra 99.9 1.4E-21 4.7E-26 184.0 14.7 221 27-273 31-271 (483)
196 3nmy_A Xometc, cystathionine g 99.9 1.1E-20 3.8E-25 173.6 19.2 188 88-309 68-262 (400)
197 4e77_A Glutamate-1-semialdehyd 99.9 2.7E-21 9.2E-26 179.2 14.6 243 43-309 51-316 (429)
198 3ht4_A Aluminum resistance pro 99.9 1.1E-20 3.8E-25 175.0 18.1 178 93-289 67-259 (431)
199 2ctz_A O-acetyl-L-homoserine s 99.9 1.8E-20 6.3E-25 173.4 19.1 158 88-272 59-222 (421)
200 3hbx_A GAD 1, glutamate decarb 99.9 8E-20 2.7E-24 172.7 22.9 204 61-274 66-294 (502)
201 3vp6_A Glutamate decarboxylase 99.9 8.1E-20 2.8E-24 173.0 23.0 199 66-274 111-333 (511)
202 3ecd_A Serine hydroxymethyltra 99.8 1.8E-20 6.2E-25 172.8 17.3 214 46-290 33-260 (425)
203 2cjg_A L-lysine-epsilon aminot 99.8 5.2E-21 1.8E-25 178.5 12.9 241 43-309 52-346 (449)
204 2oqx_A Tryptophanase; lyase, p 99.8 2.1E-20 7.2E-25 174.9 16.4 194 65-272 53-280 (467)
205 3e9k_A Kynureninase; kynurenin 99.8 3.4E-20 1.2E-24 173.6 15.7 207 45-272 66-292 (465)
206 2okj_A Glutamate decarboxylase 99.8 3.8E-19 1.3E-23 168.2 22.8 185 82-274 123-330 (504)
207 1js3_A DDC;, DOPA decarboxylas 99.8 7.6E-20 2.6E-24 172.2 17.3 200 64-273 87-319 (486)
208 2jis_A Cysteine sulfinic acid 99.8 7.7E-19 2.6E-23 166.6 22.8 181 82-273 139-343 (515)
209 2qma_A Diaminobutyrate-pyruvat 99.8 4.2E-19 1.4E-23 167.6 20.1 203 61-274 110-342 (497)
210 3h7f_A Serine hydroxymethyltra 99.8 8.2E-20 2.8E-24 170.2 14.5 212 46-289 46-271 (447)
211 3gbx_A Serine hydroxymethyltra 99.8 9.7E-20 3.3E-24 167.6 13.1 204 63-289 42-258 (420)
212 2x3l_A ORN/Lys/Arg decarboxyla 99.8 1.6E-19 5.6E-24 168.2 14.7 170 83-273 53-227 (446)
213 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.6E-18 1.2E-22 156.1 22.7 148 62-228 12-166 (390)
214 2vi8_A Serine hydroxymethyltra 99.8 3E-19 1E-23 163.6 14.4 210 44-290 23-250 (405)
215 2yky_A Beta-transaminase; tran 99.7 5E-21 1.7E-25 178.5 0.0 237 42-309 97-350 (465)
216 2z67_A O-phosphoseryl-tRNA(SEC 99.8 7.2E-19 2.5E-23 164.3 13.0 202 89-307 131-342 (456)
217 2fyf_A PSAT, phosphoserine ami 99.8 2.5E-18 8.6E-23 157.6 14.3 195 44-272 38-237 (398)
218 4e1o_A HDC, histidine decarbox 99.8 1.2E-17 3.9E-22 157.1 16.8 200 64-273 92-325 (481)
219 2a7v_A Serine hydroxymethyltra 99.8 1.6E-17 5.3E-22 155.8 17.3 223 25-273 39-281 (490)
220 2vyc_A Biodegradative arginine 99.8 2.5E-17 8.6E-22 162.2 19.4 171 88-273 206-402 (755)
221 1c4k_A Protein (ornithine deca 99.7 1.1E-17 3.9E-22 163.4 14.7 173 85-272 171-370 (730)
222 3ke3_A Putative serine-pyruvat 99.7 4.6E-17 1.6E-21 148.3 17.5 168 91-272 35-214 (379)
223 3k40_A Aromatic-L-amino-acid d 99.7 7.1E-17 2.4E-21 151.5 17.8 199 65-274 88-319 (475)
224 1ohv_A 4-aminobutyrate aminotr 99.7 2.3E-17 7.9E-22 154.7 14.4 248 42-309 60-369 (472)
225 3n75_A LDC, lysine decarboxyla 99.7 2E-16 6.8E-21 153.7 16.2 172 85-273 193-383 (715)
226 1wyu_A Glycine dehydrogenase ( 99.7 7.7E-16 2.6E-20 142.9 17.2 194 48-272 67-276 (438)
227 3m5u_A Phosphoserine aminotran 99.5 6.5E-13 2.2E-17 119.9 13.9 191 44-271 3-207 (361)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 1.4E-13 4.9E-18 126.5 9.2 178 88-272 95-281 (450)
229 3qm2_A Phosphoserine aminotran 99.5 1.6E-13 5.4E-18 125.1 9.2 185 61-272 36-236 (386)
230 4ao9_A Beta-phenylalanine amin 99.4 1.5E-12 5E-17 120.7 14.5 235 43-309 85-336 (454)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 1.1E-12 3.6E-17 119.8 11.7 180 96-290 122-310 (501)
232 3e77_A Phosphoserine aminotran 99.4 1.7E-12 6E-17 117.6 12.2 185 60-272 21-221 (377)
233 4atq_A 4-aminobutyrate transam 99.4 3.3E-11 1.1E-15 112.0 18.5 248 43-309 62-340 (456)
234 4e3q_A Pyruvate transaminase; 99.3 7.3E-11 2.5E-15 110.1 19.5 252 41-309 63-358 (473)
235 4a0g_A Adenosylmethionine-8-am 99.3 1.6E-10 5.6E-15 114.7 18.0 248 46-309 381-716 (831)
236 3ou5_A Serine hydroxymethyltra 99.2 1.6E-09 5.6E-14 98.5 18.3 224 23-272 37-280 (490)
237 3gh5_A HEX1, beta-hexosaminida 83.1 3.5 0.00012 38.4 7.9 113 106-222 126-274 (525)
238 1ofu_X SULA, hypothetical prot 76.8 19 0.00065 26.1 8.7 101 112-221 6-114 (119)
239 1jak_A Beta-N-acetylhexosamini 76.0 9.4 0.00032 35.4 8.4 112 107-222 103-249 (512)
240 4hp8_A 2-deoxy-D-gluconate 3-d 75.5 20 0.0007 29.6 9.6 99 108-212 7-109 (247)
241 1oft_A SULA, hypothetical prot 74.0 28 0.00096 26.8 9.8 100 112-220 48-155 (161)
242 2gjx_A Beta-hexosaminidase alp 69.9 15 0.0005 34.1 8.1 108 107-222 97-233 (507)
243 1now_A Beta-hexosaminidase bet 69.4 9.9 0.00034 35.3 6.8 107 107-222 103-238 (507)
244 3rwb_A TPLDH, pyridoxal 4-dehy 67.2 34 0.0012 27.8 9.3 96 110-211 6-109 (247)
245 4fgs_A Probable dehydrogenase 66.9 30 0.001 29.1 8.9 98 109-212 28-133 (273)
246 2yvq_A Carbamoyl-phosphate syn 62.9 45 0.0015 24.9 10.7 103 113-223 27-131 (143)
247 3rcn_A Beta-N-acetylhexosamini 62.5 18 0.00061 33.8 7.1 116 106-222 82-242 (543)
248 4dqx_A Probable oxidoreductase 62.2 45 0.0015 27.7 9.2 95 109-210 26-129 (277)
249 3ozo_A N-acetylglucosaminidase 61.0 34 0.0012 32.1 8.8 102 112-222 142-274 (572)
250 3gem_A Short chain dehydrogena 60.0 44 0.0015 27.4 8.7 65 109-181 26-90 (260)
251 3tpc_A Short chain alcohol deh 59.9 46 0.0016 27.1 8.8 68 109-182 6-73 (257)
252 3m1a_A Putative dehydrogenase; 57.6 52 0.0018 27.1 8.8 65 111-181 6-70 (281)
253 3gvc_A Oxidoreductase, probabl 56.8 42 0.0014 27.9 8.1 93 111-210 30-131 (277)
254 4e6p_A Probable sorbitol dehyd 56.6 61 0.0021 26.4 9.0 67 109-181 7-73 (259)
255 4gqr_A Pancreatic alpha-amylas 56.5 8.7 0.0003 34.9 3.9 29 202-230 75-103 (496)
256 3grp_A 3-oxoacyl-(acyl carrier 56.5 47 0.0016 27.4 8.3 68 109-182 26-93 (266)
257 3rd5_A Mypaa.01249.C; ssgcid, 56.2 25 0.00086 29.4 6.6 69 109-183 15-83 (291)
258 3l6e_A Oxidoreductase, short-c 54.6 58 0.002 26.1 8.4 94 112-211 5-106 (235)
259 3tzq_B Short-chain type dehydr 54.4 81 0.0028 25.9 9.5 68 109-182 10-77 (271)
260 1uls_A Putative 3-oxoacyl-acyl 54.3 77 0.0026 25.5 9.2 63 111-181 6-68 (245)
261 4eso_A Putative oxidoreductase 53.9 62 0.0021 26.3 8.6 97 109-211 7-111 (255)
262 3ppi_A 3-hydroxyacyl-COA dehyd 52.6 44 0.0015 27.6 7.5 54 110-164 30-83 (281)
263 3rjz_A N-type ATP pyrophosphat 52.0 97 0.0033 25.3 10.4 99 112-221 7-120 (237)
264 3n74_A 3-ketoacyl-(acyl-carrie 51.0 84 0.0029 25.4 8.9 67 109-181 8-74 (261)
265 2o23_A HADH2 protein; HSD17B10 50.7 97 0.0033 25.0 10.2 68 109-182 11-78 (265)
266 3op4_A 3-oxoacyl-[acyl-carrier 50.6 79 0.0027 25.5 8.7 95 109-210 8-111 (248)
267 3pxx_A Carveol dehydrogenase; 50.2 56 0.0019 26.9 7.8 96 110-211 10-126 (287)
268 4gkb_A 3-oxoacyl-[acyl-carrier 49.8 1.1E+02 0.0037 25.2 10.2 99 108-212 5-112 (258)
269 3tha_A Tryptophan synthase alp 49.7 88 0.003 25.9 8.6 153 44-222 41-204 (252)
270 3h7a_A Short chain dehydrogena 49.6 1E+02 0.0035 24.9 10.3 96 109-210 6-111 (252)
271 1pjq_A CYSG, siroheme synthase 48.8 67 0.0023 29.1 8.5 97 107-226 9-107 (457)
272 1tks_A 3,4-dihydroxy-2-butanon 48.5 36 0.0012 27.3 5.7 38 182-222 157-194 (204)
273 4ibo_A Gluconate dehydrogenase 48.0 1.1E+02 0.0038 25.1 9.3 68 109-182 25-95 (271)
274 1bqc_A Protein (beta-mannanase 48.0 50 0.0017 27.7 7.2 22 203-224 64-85 (302)
275 1c7s_A Beta-N-acetylhexosamini 47.9 32 0.0011 34.0 6.5 116 107-222 265-418 (858)
276 4g81_D Putative hexonate dehyd 47.9 1.2E+02 0.004 25.0 9.4 98 108-211 7-115 (255)
277 1i4n_A Indole-3-glycerol phosp 47.9 20 0.00067 29.9 4.3 50 170-225 109-158 (251)
278 3vnd_A TSA, tryptophan synthas 47.7 1.2E+02 0.0041 25.2 13.7 96 122-222 111-211 (267)
279 4fn4_A Short chain dehydrogena 46.9 90 0.0031 25.7 8.4 97 110-212 7-115 (254)
280 1g94_A Alpha-amylase; beta-alp 46.8 15 0.0005 33.3 3.8 29 202-230 63-91 (448)
281 3i6i_A Putative leucoanthocyan 46.5 1E+02 0.0036 26.1 9.2 103 111-227 11-121 (346)
282 2nu8_A Succinyl-COA ligase [AD 46.0 27 0.00092 29.6 5.1 76 144-229 52-127 (288)
283 1hdc_A 3-alpha, 20 beta-hydrox 45.6 1.1E+02 0.0039 24.6 8.9 66 111-182 6-71 (254)
284 3dqp_A Oxidoreductase YLBE; al 44.8 1.1E+02 0.0037 23.8 8.9 94 113-218 3-98 (219)
285 2yv2_A Succinyl-COA synthetase 44.6 32 0.0011 29.3 5.3 52 173-230 84-135 (297)
286 2yv1_A Succinyl-COA ligase [AD 44.3 22 0.00076 30.2 4.3 52 173-230 83-134 (294)
287 7a3h_A Endoglucanase; hydrolas 44.2 48 0.0016 28.0 6.5 14 153-166 54-67 (303)
288 1hxh_A 3BETA/17BETA-hydroxyste 44.1 1.2E+02 0.0043 24.3 9.3 65 111-181 7-71 (253)
289 3pzt_A Endoglucanase; alpha/be 43.4 50 0.0017 28.3 6.5 13 153-165 79-91 (327)
290 3f9i_A 3-oxoacyl-[acyl-carrier 43.4 79 0.0027 25.3 7.6 68 109-182 13-80 (249)
291 1oi7_A Succinyl-COA synthetase 43.1 29 0.00099 29.4 4.8 52 173-230 77-128 (288)
292 1ud2_A Amylase, alpha-amylase; 43.0 19 0.00065 32.8 3.9 27 203-229 80-106 (480)
293 3bh4_A Alpha-amylase; calcium, 42.7 19 0.00067 32.8 3.9 28 202-229 77-104 (483)
294 3lyl_A 3-oxoacyl-(acyl-carrier 42.4 1.3E+02 0.0044 24.0 9.2 66 110-181 5-73 (247)
295 3guy_A Short-chain dehydrogena 42.2 86 0.0029 24.8 7.5 92 112-210 3-100 (230)
296 1lwj_A 4-alpha-glucanotransfer 42.0 23 0.00079 31.8 4.3 28 203-230 69-96 (441)
297 1vl8_A Gluconate 5-dehydrogena 41.9 1.4E+02 0.0048 24.3 9.6 68 109-182 20-91 (267)
298 1ht6_A AMY1, alpha-amylase iso 41.8 24 0.00082 31.4 4.3 29 202-230 67-95 (405)
299 1hvx_A Alpha-amylase; hydrolas 41.7 20 0.0007 33.0 3.9 28 202-229 80-107 (515)
300 3gaf_A 7-alpha-hydroxysteroid 41.7 1.4E+02 0.0047 24.1 9.1 96 108-210 10-116 (256)
301 4dyv_A Short-chain dehydrogena 41.5 1.1E+02 0.0038 25.1 8.3 65 112-182 29-94 (272)
302 1wpc_A Glucan 1,4-alpha-maltoh 41.5 21 0.00071 32.6 3.9 27 203-229 82-108 (485)
303 3tjr_A Short chain dehydrogena 41.4 1.5E+02 0.0053 24.6 9.3 68 109-182 30-100 (301)
304 4aie_A Glucan 1,6-alpha-glucos 41.4 21 0.0007 33.0 3.9 28 202-229 78-105 (549)
305 1w3i_A EDA, 2-keto-3-deoxy glu 41.2 1.6E+02 0.0054 24.7 9.7 82 91-179 52-146 (293)
306 3tsc_A Putative oxidoreductase 41.2 1.1E+02 0.0038 25.0 8.3 32 109-141 10-41 (277)
307 2qlc_A DNA repair protein RADC 41.1 55 0.0019 23.9 5.4 49 171-220 53-106 (126)
308 2ew8_A (S)-1-phenylethanol deh 41.1 1.4E+02 0.0047 24.0 10.2 66 110-181 7-73 (249)
309 1wza_A Alpha-amylase A; hydrol 40.6 23 0.00077 32.4 4.0 29 202-230 80-108 (488)
310 1mxg_A Alpha amylase; hyperthe 40.5 25 0.00085 31.7 4.2 29 202-230 85-113 (435)
311 3ak4_A NADH-dependent quinucli 40.4 1.4E+02 0.0049 24.0 9.0 32 110-142 12-43 (263)
312 2r91_A 2-keto-3-deoxy-(6-phosp 40.4 1.4E+02 0.0048 25.0 8.7 66 113-179 67-145 (286)
313 1gcy_A Glucan 1,4-alpha-maltot 40.3 29 0.001 32.1 4.8 30 202-231 91-120 (527)
314 3rih_A Short chain dehydrogena 40.2 1.6E+02 0.0055 24.5 10.3 96 109-211 40-148 (293)
315 4fc7_A Peroxisomal 2,4-dienoyl 40.2 1.5E+02 0.0052 24.2 9.5 66 110-181 27-96 (277)
316 3r1i_A Short-chain type dehydr 39.8 1.6E+02 0.0053 24.2 10.1 69 108-182 30-101 (276)
317 2guy_A Alpha-amylase A; (beta- 39.8 25 0.00087 31.9 4.2 28 203-230 97-124 (478)
318 3zu3_A Putative reductase YPO4 39.7 2E+02 0.007 25.5 11.2 89 87-181 24-128 (405)
319 1jae_A Alpha-amylase; glycosid 39.5 20 0.00067 32.7 3.4 29 202-230 73-101 (471)
320 2z1k_A (NEO)pullulanase; hydro 39.4 27 0.00091 31.7 4.3 28 203-230 96-123 (475)
321 3uuw_A Putative oxidoreductase 39.3 1.2E+02 0.0041 25.4 8.3 72 145-228 57-128 (308)
322 3qlj_A Short chain dehydrogena 39.3 1.5E+02 0.0052 24.9 9.0 66 111-182 28-106 (322)
323 3a5f_A Dihydrodipicolinate syn 38.9 1.4E+02 0.0047 25.1 8.5 34 112-146 72-108 (291)
324 1nff_A Putative oxidoreductase 38.8 1.5E+02 0.0053 23.9 9.3 32 110-142 7-38 (260)
325 2nuw_A 2-keto-3-deoxygluconate 38.5 1.7E+02 0.006 24.4 9.7 83 91-180 52-147 (288)
326 4dmm_A 3-oxoacyl-[acyl-carrier 38.5 1.2E+02 0.0041 24.8 8.0 96 109-211 27-135 (269)
327 3uve_A Carveol dehydrogenase ( 38.4 1.1E+02 0.0039 25.1 7.9 32 109-141 10-41 (286)
328 3bk2_A RNAse J, metal dependen 38.4 48 0.0017 30.9 6.0 78 132-218 337-423 (562)
329 4had_A Probable oxidoreductase 37.8 82 0.0028 27.0 7.1 26 202-227 122-147 (350)
330 3is3_A 17BETA-hydroxysteroid d 37.7 1.1E+02 0.0038 25.0 7.7 96 109-211 17-125 (270)
331 1yht_A DSPB; beta barrel, hydr 37.7 41 0.0014 29.6 5.1 73 148-222 38-113 (367)
332 3ged_A Short-chain dehydrogena 37.5 1.6E+02 0.0053 24.1 8.4 94 112-212 4-105 (247)
333 1x1t_A D(-)-3-hydroxybutyrate 37.4 1.6E+02 0.0055 23.7 9.8 65 112-182 6-75 (260)
334 2wsb_A Galactitol dehydrogenas 37.3 1.6E+02 0.0053 23.5 9.1 67 109-181 10-77 (254)
335 3dhu_A Alpha-amylase; structur 37.2 27 0.00092 31.5 3.9 29 202-230 82-110 (449)
336 2aaa_A Alpha-amylase; glycosid 37.2 32 0.0011 31.4 4.4 29 203-231 97-125 (484)
337 2yl5_A Beta-N-acetylhexosamini 37.0 27 0.00092 31.7 3.8 28 195-222 86-113 (442)
338 3l77_A Short-chain alcohol deh 37.0 1.5E+02 0.0052 23.3 10.5 92 112-209 4-107 (235)
339 1x7f_A Outer surface protein; 36.8 47 0.0016 29.4 5.2 81 175-269 45-126 (385)
340 2q5c_A NTRC family transcripti 36.5 87 0.003 24.6 6.4 121 88-222 12-147 (196)
341 3ai3_A NADPH-sorbose reductase 36.4 1.7E+02 0.0057 23.6 9.9 33 109-142 6-38 (263)
342 2dh2_A 4F2 cell-surface antige 36.3 34 0.0012 30.7 4.4 28 203-230 81-108 (424)
343 2ya0_A Putative alkaline amylo 36.2 26 0.0009 33.9 3.9 27 203-229 254-280 (714)
344 3mwd_B ATP-citrate synthase; A 36.1 82 0.0028 27.3 6.6 79 142-230 64-144 (334)
345 2a4k_A 3-oxoacyl-[acyl carrier 36.1 1.5E+02 0.0051 24.1 8.2 65 111-181 7-71 (263)
346 1xkq_A Short-chain reductase f 35.8 1.6E+02 0.0054 24.1 8.4 31 111-142 7-37 (280)
347 3sx2_A Putative 3-ketoacyl-(ac 35.8 1.8E+02 0.0061 23.7 9.4 32 109-141 12-43 (278)
348 3oam_A 3-deoxy-manno-octuloson 35.8 1.7E+02 0.0058 23.6 8.4 28 186-216 92-119 (252)
349 3pgx_A Carveol dehydrogenase; 35.7 1.3E+02 0.0046 24.6 7.9 32 109-141 14-45 (280)
350 3ndz_A Endoglucanase D; cellot 35.7 68 0.0023 27.7 6.2 24 204-227 83-106 (345)
351 3k8d_A 3-deoxy-manno-octuloson 35.7 1.6E+02 0.0056 24.2 8.3 29 186-217 108-136 (264)
352 1ua7_A Alpha-amylase; beta-alp 35.7 30 0.001 30.9 4.0 30 202-231 73-102 (422)
353 3nco_A Endoglucanase fncel5A; 35.7 80 0.0027 26.7 6.6 17 148-164 46-62 (320)
354 2jah_A Clavulanic acid dehydro 35.6 1.7E+02 0.0058 23.4 9.5 66 110-181 7-75 (247)
355 2epl_X N-acetyl-beta-D-glucosa 35.5 1.6E+02 0.0056 27.9 9.1 104 107-222 42-163 (627)
356 3sju_A Keto reductase; short-c 35.4 1.8E+02 0.0063 23.8 8.9 64 112-181 26-92 (279)
357 1xhl_A Short-chain dehydrogena 35.3 1.6E+02 0.0056 24.4 8.4 31 111-142 27-57 (297)
358 1j0h_A Neopullulanase; beta-al 35.2 32 0.0011 32.3 4.2 28 203-230 222-249 (588)
359 3sxp_A ADP-L-glycero-D-mannohe 35.1 2.1E+02 0.0071 24.3 10.4 103 109-221 9-134 (362)
360 3tfo_A Putative 3-oxoacyl-(acy 35.1 1.8E+02 0.0063 23.7 9.6 64 112-181 6-72 (264)
361 1pii_A N-(5'phosphoribosyl)ant 35.0 44 0.0015 30.4 4.9 50 169-224 115-164 (452)
362 2yl6_A Beta-N-acetylhexosamini 35.0 26 0.00089 31.7 3.4 28 195-222 83-110 (434)
363 3rkr_A Short chain oxidoreduct 35.0 1.8E+02 0.0061 23.5 9.7 65 111-181 30-97 (262)
364 2q2v_A Beta-D-hydroxybutyrate 34.6 1.8E+02 0.0061 23.3 9.8 66 111-182 5-71 (255)
365 3na8_A Putative dihydrodipicol 34.5 1.7E+02 0.0057 24.9 8.4 34 112-146 95-131 (315)
366 1wzl_A Alpha-amylase II; pullu 34.4 30 0.001 32.5 3.9 29 202-230 218-246 (585)
367 2cfc_A 2-(R)-hydroxypropyl-COM 34.4 1.7E+02 0.0059 23.1 8.4 30 112-142 4-33 (250)
368 2pnf_A 3-oxoacyl-[acyl-carrier 34.4 1.7E+02 0.0058 23.1 9.5 33 109-142 6-38 (248)
369 1xp8_A RECA protein, recombina 34.2 1.2E+02 0.0041 26.5 7.5 93 129-222 97-206 (366)
370 2ehh_A DHDPS, dihydrodipicolin 34.0 1E+02 0.0034 26.0 6.8 34 112-146 71-107 (294)
371 3io5_A Recombination and repai 34.0 1.4E+02 0.0048 25.8 7.6 100 122-226 45-172 (333)
372 3auf_A Glycinamide ribonucleot 33.9 1.5E+02 0.0052 24.0 7.6 90 113-207 26-120 (229)
373 3l55_A B-1,4-endoglucanase/cel 33.9 89 0.0031 27.1 6.6 60 147-228 56-115 (353)
374 3icg_A Endoglucanase D; cellul 33.8 71 0.0024 29.4 6.3 24 204-227 86-109 (515)
375 1vic_A 3-deoxy-manno-octuloson 33.8 1.9E+02 0.0064 23.4 8.8 30 185-217 91-120 (262)
376 2wc7_A Alpha amylase, catalyti 33.7 31 0.0011 31.4 3.8 27 203-229 102-128 (488)
377 3edf_A FSPCMD, cyclomaltodextr 33.7 32 0.0011 32.4 3.9 29 202-230 197-225 (601)
378 1h1n_A Endo type cellulase ENG 33.6 1.1E+02 0.0037 25.7 7.1 16 149-164 37-52 (305)
379 3nyw_A Putative oxidoreductase 33.6 1.9E+02 0.0063 23.3 8.8 34 110-144 7-40 (250)
380 3rc1_A Sugar 3-ketoreductase; 33.6 2.1E+02 0.0071 24.5 9.0 27 201-227 124-150 (350)
381 3cpr_A Dihydrodipicolinate syn 33.6 1.4E+02 0.0049 25.2 7.8 54 168-222 30-90 (304)
382 3rot_A ABC sugar transporter, 33.5 75 0.0026 26.2 6.0 66 149-222 26-91 (297)
383 3l21_A DHDPS, dihydrodipicolin 33.4 1.3E+02 0.0044 25.5 7.5 63 159-222 20-89 (304)
384 2c07_A 3-oxoacyl-(acyl-carrier 33.4 2E+02 0.0068 23.5 10.1 65 111-181 45-112 (285)
385 2ffi_A 2-pyrone-4,6-dicarboxyl 33.3 1.4E+02 0.0049 24.3 7.8 23 206-228 149-171 (288)
386 3tsm_A IGPS, indole-3-glycerol 33.3 90 0.0031 26.1 6.2 50 169-224 127-176 (272)
387 4aef_A Neopullulanase (alpha-a 33.2 33 0.0011 32.7 3.9 28 202-229 284-311 (645)
388 2rhc_B Actinorhodin polyketide 33.2 2E+02 0.0068 23.5 9.2 31 111-142 23-53 (277)
389 3o38_A Short chain dehydrogena 33.2 1.8E+02 0.0062 23.4 8.2 35 109-144 21-56 (266)
390 3oec_A Carveol dehydrogenase ( 32.8 1.6E+02 0.0056 24.7 8.1 31 110-141 46-76 (317)
391 1zja_A Trehalulose synthase; s 32.8 38 0.0013 31.6 4.2 28 203-230 79-106 (557)
392 1m53_A Isomaltulose synthase; 32.7 38 0.0013 31.7 4.2 29 202-230 91-119 (570)
393 3m5v_A DHDPS, dihydrodipicolin 32.7 89 0.0031 26.4 6.3 54 168-222 21-82 (301)
394 3si9_A DHDPS, dihydrodipicolin 32.6 1.9E+02 0.0064 24.6 8.4 34 112-146 93-129 (315)
395 3irs_A Uncharacterized protein 32.6 1E+02 0.0035 25.7 6.7 17 208-224 173-190 (291)
396 3bc9_A AMYB, alpha amylase, ca 32.4 35 0.0012 32.3 3.9 28 202-229 207-234 (599)
397 3t7c_A Carveol dehydrogenase; 32.4 2.1E+02 0.0073 23.6 10.5 32 109-141 27-58 (299)
398 3tak_A DHDPS, dihydrodipicolin 32.3 2.2E+02 0.0076 23.8 9.4 69 112-181 72-152 (291)
399 1m7x_A 1,4-alpha-glucan branch 32.1 54 0.0019 31.0 5.3 29 202-230 203-231 (617)
400 3tqd_A 3-deoxy-manno-octuloson 32.1 2.1E+02 0.0071 23.4 8.7 28 185-215 98-125 (256)
401 1p9o_A Phosphopantothenoylcyst 32.0 26 0.00088 30.2 2.7 59 82-144 11-89 (313)
402 2l3i_A Aoxki4A, antimicrobial 31.9 27 0.00091 17.7 1.6 11 4-14 3-13 (30)
403 3bmv_A Cyclomaltodextrin gluca 31.9 35 0.0012 32.8 3.9 28 203-230 116-143 (683)
404 3bzy_B ESCU; auto cleavage pro 31.9 30 0.001 23.3 2.5 24 206-229 29-52 (83)
405 1d3c_A Cyclodextrin glycosyltr 31.8 35 0.0012 32.8 3.9 28 203-230 115-142 (686)
406 2ki0_A DS119; beta-alpha-beta, 31.8 37 0.0013 17.9 2.2 19 202-220 13-31 (36)
407 1cyg_A Cyclodextrin glucanotra 31.8 35 0.0012 32.7 3.9 28 203-230 111-138 (680)
408 3flu_A DHDPS, dihydrodipicolin 31.7 2.3E+02 0.0079 23.8 9.9 69 112-181 78-158 (297)
409 1qho_A Alpha-amylase; glycosid 31.6 36 0.0012 32.7 3.9 28 203-230 107-134 (686)
410 3av3_A Phosphoribosylglycinami 31.5 1.5E+02 0.0051 23.6 7.2 89 114-207 8-101 (212)
411 1hjs_A Beta-1,4-galactanase; 4 31.5 2E+02 0.007 24.6 8.5 35 194-228 50-84 (332)
412 1uok_A Oligo-1,6-glucosidase; 31.5 41 0.0014 31.4 4.2 29 202-230 77-105 (558)
413 3qr3_A Endoglucanase EG-II; TI 31.5 97 0.0033 26.8 6.4 15 150-164 50-64 (340)
414 2wm3_A NMRA-like family domain 31.4 1.1E+02 0.0037 25.3 6.6 99 112-218 7-107 (299)
415 3ec7_A Putative dehydrogenase; 31.3 2.5E+02 0.0085 24.0 9.4 27 201-227 122-149 (357)
416 3cxt_A Dehydrogenase with diff 31.2 2.2E+02 0.0077 23.5 8.8 33 109-142 33-65 (291)
417 2b4q_A Rhamnolipids biosynthes 31.1 1.8E+02 0.0063 23.7 8.0 34 109-143 28-61 (276)
418 1geg_A Acetoin reductase; SDR 31.0 2E+02 0.007 23.0 9.0 65 112-182 4-71 (256)
419 3qiv_A Short-chain dehydrogena 31.0 2E+02 0.0069 22.9 8.9 68 109-182 8-78 (253)
420 3flu_A DHDPS, dihydrodipicolin 31.0 1.3E+02 0.0045 25.3 7.1 54 168-222 21-81 (297)
421 2ze0_A Alpha-glucosidase; TIM 30.8 36 0.0012 31.7 3.8 28 202-229 77-104 (555)
422 3qze_A DHDPS, dihydrodipicolin 30.8 2.5E+02 0.0084 23.8 9.7 69 112-181 94-174 (314)
423 3qp9_A Type I polyketide synth 30.7 3.2E+02 0.011 25.1 10.6 98 109-211 249-371 (525)
424 3e48_A Putative nucleoside-dip 30.7 1.4E+02 0.0049 24.3 7.3 94 113-218 3-98 (289)
425 3m5v_A DHDPS, dihydrodipicolin 30.5 2.4E+02 0.0083 23.7 9.6 34 112-146 79-115 (301)
426 3aj7_A Oligo-1,6-glucosidase; 30.5 43 0.0015 31.5 4.2 29 202-230 86-114 (589)
427 3ksm_A ABC-type sugar transpor 30.5 67 0.0023 25.9 5.1 66 149-222 23-89 (276)
428 1zk4_A R-specific alcohol dehy 30.5 2E+02 0.0069 22.7 9.0 31 111-142 7-37 (251)
429 2wkj_A N-acetylneuraminate lya 30.4 1.6E+02 0.0053 24.9 7.4 54 168-222 25-85 (303)
430 3ruf_A WBGU; rossmann fold, UD 30.4 2.4E+02 0.0083 23.6 10.8 100 110-218 25-143 (351)
431 3s55_A Putative short-chain de 30.3 2.2E+02 0.0076 23.1 10.0 32 109-141 9-40 (281)
432 4egf_A L-xylulose reductase; s 30.2 2.2E+02 0.0075 23.0 8.7 56 109-165 19-78 (266)
433 1yb1_A 17-beta-hydroxysteroid 30.2 2.2E+02 0.0075 23.1 8.6 33 109-142 30-62 (272)
434 4aee_A Alpha amylase, catalyti 30.2 39 0.0013 32.5 3.9 29 202-230 310-338 (696)
435 2bhu_A Maltooligosyltrehalose 30.2 51 0.0017 31.1 4.6 29 202-230 191-219 (602)
436 1b93_A Protein (methylglyoxal 29.9 1.6E+02 0.0055 22.2 6.6 96 121-227 24-123 (152)
437 2zcu_A Uncharacterized oxidore 29.9 2.2E+02 0.0075 22.9 9.3 93 113-218 2-96 (286)
438 2zic_A Dextran glucosidase; TI 29.9 37 0.0013 31.5 3.6 28 202-229 77-104 (543)
439 4dpp_A DHDPS 2, dihydrodipicol 29.8 1.7E+02 0.006 25.5 7.7 54 168-222 73-133 (360)
440 1qyd_A Pinoresinol-lariciresin 29.8 2.3E+02 0.0079 23.2 9.5 100 111-222 5-113 (313)
441 2fp4_A Succinyl-COA ligase [GD 29.8 38 0.0013 28.9 3.4 52 173-230 84-136 (305)
442 1ea9_C Cyclomaltodextrinase; h 29.7 35 0.0012 32.0 3.5 29 202-230 217-245 (583)
443 3lf2_A Short chain oxidoreduct 29.7 2.2E+02 0.0076 23.0 8.7 36 108-144 6-41 (265)
444 1spx_A Short-chain reductase f 29.6 1.9E+02 0.0063 23.5 7.8 31 111-142 7-37 (278)
445 3mio_A DHBP synthase, 3,4-dihy 29.2 1.4E+02 0.0047 23.9 6.3 36 184-222 158-194 (206)
446 1iy8_A Levodione reductase; ox 29.1 2.3E+02 0.0077 22.9 9.3 32 110-142 13-44 (267)
447 3e2i_A Thymidine kinase; Zn-bi 29.1 1.5E+02 0.005 24.0 6.6 102 120-238 42-147 (219)
448 3a28_C L-2.3-butanediol dehydr 29.0 2.2E+02 0.0076 22.8 8.9 29 112-141 4-32 (258)
449 3ucx_A Short chain dehydrogena 28.9 2.3E+02 0.0078 22.9 9.0 67 109-181 10-79 (264)
450 3eb2_A Putative dihydrodipicol 28.7 2.3E+02 0.0079 23.8 8.2 67 113-180 76-154 (300)
451 3tak_A DHDPS, dihydrodipicolin 28.6 1.3E+02 0.0043 25.3 6.5 54 168-222 15-75 (291)
452 3sc4_A Short chain dehydrogena 28.6 2.4E+02 0.0083 23.1 10.8 97 109-211 8-122 (285)
453 2ya1_A Putative alkaline amylo 28.5 38 0.0013 34.3 3.6 28 203-230 561-588 (1014)
454 3ayr_A Endoglucanase; TIM barr 28.4 1.2E+02 0.0042 26.3 6.6 18 148-165 67-84 (376)
455 3m07_A Putative alpha amylase; 28.3 60 0.0021 30.8 4.8 29 202-230 201-229 (618)
456 4id9_A Short-chain dehydrogena 28.1 2.6E+02 0.009 23.3 9.6 93 109-218 18-118 (347)
457 1w6u_A 2,4-dienoyl-COA reducta 28.1 2.5E+02 0.0085 23.0 9.3 31 111-142 27-57 (302)
458 3v2h_A D-beta-hydroxybutyrate 28.0 2.5E+02 0.0085 23.0 9.7 34 109-143 24-57 (281)
459 3kts_A Glycerol uptake operon 28.0 82 0.0028 24.9 4.8 42 173-222 18-59 (192)
460 3awd_A GOX2181, putative polyo 27.8 2.3E+02 0.0078 22.5 9.7 68 109-182 12-82 (260)
461 2uvd_A 3-oxoacyl-(acyl-carrier 27.8 2.3E+02 0.0078 22.5 9.0 66 111-182 5-74 (246)
462 2vc6_A MOSA, dihydrodipicolina 27.5 1E+02 0.0035 26.0 5.7 34 112-146 71-107 (292)
463 4b79_A PA4098, probable short- 27.5 2E+02 0.0068 23.4 7.3 93 110-211 11-105 (242)
464 3p9x_A Phosphoribosylglycinami 27.4 2.4E+02 0.0081 22.5 7.7 90 114-208 7-101 (211)
465 2ehh_A DHDPS, dihydrodipicolin 27.2 1.8E+02 0.0061 24.4 7.2 53 169-222 15-74 (294)
466 3daq_A DHDPS, dihydrodipicolin 27.2 2.7E+02 0.0094 23.2 10.1 34 112-146 73-109 (292)
467 3cpr_A Dihydrodipicolinate syn 27.2 2.8E+02 0.0096 23.3 11.8 70 112-182 87-168 (304)
468 1oaa_A Sepiapterin reductase; 27.0 2.4E+02 0.0082 22.5 7.9 31 111-142 7-40 (259)
469 3ftp_A 3-oxoacyl-[acyl-carrier 27.0 2.5E+02 0.0087 22.8 9.0 94 110-210 28-133 (270)
470 3czg_A Sucrose hydrolase; (alp 26.9 49 0.0017 31.5 3.9 28 202-229 154-181 (644)
471 3gdg_A Probable NADP-dependent 26.9 2.4E+02 0.0081 22.7 7.9 67 109-181 19-92 (267)
472 2zr9_A Protein RECA, recombina 26.9 1E+02 0.0035 26.7 5.7 98 120-222 75-193 (349)
473 3n0v_A Formyltetrahydrofolate 26.9 1.2E+02 0.0041 25.5 6.0 114 87-208 62-186 (286)
474 2ojp_A DHDPS, dihydrodipicolin 26.9 1.4E+02 0.0048 25.0 6.5 54 168-222 15-75 (292)
475 3ezl_A Acetoacetyl-COA reducta 26.9 2.4E+02 0.0081 22.5 7.9 65 111-181 14-82 (256)
476 3vgf_A Malto-oligosyltrehalose 26.8 63 0.0022 30.1 4.6 29 202-230 166-194 (558)
477 3dz1_A Dihydrodipicolinate syn 26.8 1.4E+02 0.0049 25.3 6.6 63 159-222 13-81 (313)
478 1g5a_A Amylosucrase; glycosylt 26.7 50 0.0017 31.4 3.9 28 202-229 161-188 (628)
479 2yxg_A DHDPS, dihydrodipicolin 26.7 1.5E+02 0.005 24.9 6.6 53 169-222 15-74 (289)
480 1meo_A Phosophoribosylglycinam 26.5 1.9E+02 0.0067 22.9 6.9 89 114-207 5-98 (209)
481 3t7y_A YOP proteins translocat 26.5 41 0.0014 23.4 2.5 24 205-228 43-66 (97)
482 3imf_A Short chain dehydrogena 26.4 2.5E+02 0.0086 22.5 9.2 65 111-181 7-74 (257)
483 3pk0_A Short-chain dehydrogena 26.3 2.6E+02 0.0087 22.6 9.4 35 109-144 9-43 (262)
484 2ae2_A Protein (tropinone redu 26.3 2.5E+02 0.0086 22.5 10.5 67 109-181 8-77 (260)
485 3zv4_A CIS-2,3-dihydrobiphenyl 26.2 1.2E+02 0.0041 25.0 6.0 66 110-181 5-70 (281)
486 4fcu_A 3-deoxy-manno-octuloson 26.2 2E+02 0.0069 23.4 7.2 26 187-215 93-118 (253)
487 1qwj_A Cytidine monophospho-N- 26.0 2.4E+02 0.0082 22.2 9.1 94 120-217 28-124 (229)
488 1sb8_A WBPP; epimerase, 4-epim 25.9 1.9E+02 0.0065 24.4 7.4 116 88-218 11-145 (352)
489 3l6u_A ABC-type sugar transpor 25.9 1.4E+02 0.0049 24.2 6.4 64 149-222 31-94 (293)
490 3o1l_A Formyltetrahydrofolate 25.9 1.4E+02 0.0047 25.4 6.2 114 88-207 78-200 (302)
491 3dm5_A SRP54, signal recogniti 25.9 1.5E+02 0.0052 26.7 6.8 100 118-227 112-225 (443)
492 2p0o_A Hypothetical protein DU 25.9 36 0.0012 30.0 2.6 111 175-308 21-132 (372)
493 1fmc_A 7 alpha-hydroxysteroid 25.8 2.5E+02 0.0084 22.2 9.5 68 109-182 10-80 (255)
494 2vt1_B Surface presentation of 25.8 44 0.0015 23.0 2.5 24 205-228 28-51 (93)
495 3zss_A Putative glucanohydrola 25.8 53 0.0018 31.7 3.9 26 202-227 319-344 (695)
496 2al1_A Enolase 1, 2-phospho-D- 25.7 81 0.0028 28.4 5.0 96 120-223 276-372 (436)
497 3pff_A ATP-citrate synthase; p 25.6 1E+02 0.0035 30.3 5.9 77 142-230 550-630 (829)
498 2yxg_A DHDPS, dihydrodipicolin 25.6 2.9E+02 0.01 23.0 10.1 34 112-146 71-107 (289)
499 2ojp_A DHDPS, dihydrodipicolin 25.5 2.3E+02 0.0079 23.7 7.6 34 112-146 72-108 (292)
500 3c01_E Surface presentation of 25.4 44 0.0015 23.3 2.5 25 205-229 28-52 (98)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=6.1e-42 Score=318.24 Aligned_cols=296 Identities=33% Similarity=0.670 Sum_probs=241.4
Q ss_pred ccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC
Q 021547 5 AEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA 84 (311)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~ 84 (311)
-.+.|+...+...+. + ...|+.+++.+... ...++++|+|+.|+|..++.+++++.+.+++.+.+.......|.
T Consensus 20 ~~~~w~~~~~~~~~~---~-~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~ 93 (427)
T 3dyd_A 20 FQSMWSVRPSDMAKK---T-FNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYA 93 (427)
T ss_dssp ----CCCCCCC--------------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCC
T ss_pred cccccCcchhhHhhc---c-cchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCC
Confidence 356899887765555 4 44699888754221 12457889999999876666889999999999998876666899
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
+..|..++|+++++++.+. +..+.+++|++|+|+++|+.+++.+++++| |+|+++.|+|.++...++..|.+++.++.
T Consensus 94 ~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 171 (427)
T 3dyd_A 94 PSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPG-QNILVPRPGFSLYKTLAESMGIEVKLYNL 171 (427)
T ss_dssp CTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEec
Confidence 8899999999999999875 777888999999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
.+..++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++..+.++..+..
T Consensus 172 ~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~ 251 (427)
T 3dyd_A 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST 251 (427)
T ss_dssp EGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS
T ss_pred ccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC
Confidence 77678899999999999989999999999999999999999999999999999999999999999998877777777777
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+.++|+++|+||.|+++|+|+||++++++...+. +++++.++......+++++++|+++.++|+
T Consensus 252 ~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~ 315 (427)
T 3dyd_A 252 DVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG-NEIRDGLVKLSQRILGPCTIVQGALKSILC 315 (427)
T ss_dssp SCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred CCcEEEEeeccccCCCcCcceEEEEecCcchhhH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 7789999999999999999999999987543331 246677766644356889999999999886
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4.7e-41 Score=307.99 Aligned_cols=270 Identities=23% Similarity=0.381 Sum_probs=230.0
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
-..+.++++.....+... .++++|+|+.|+|. ++.++.+.+++.+.+.... .+|++..|..++|+++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~ 83 (385)
T 1b5p_A 11 MKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREALAEKFRR 83 (385)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 445556666554332221 35789999999864 5567899999988886543 4798888999999999999999
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+|..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|.+++.+++++++++.+|++++++.++
T Consensus 84 ~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 162 (385)
T 1b5p_A 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPG-DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT 162 (385)
T ss_dssp TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC
T ss_pred HhCCCCChHHEEEcCChHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC
Confidence 88988889999999999999999999999999 99999999999999999999999999998654577899999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
++++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++ ++.++..++. +++|+++|+||.|+++|
T Consensus 163 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~~~~G 240 (385)
T 1b5p_A 163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAFAMTG 240 (385)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTTTCGG
T ss_pred CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhcCCcc
Confidence 889999999999999999999999999999999999999999999998876 5556666655 78999999999999999
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+||+++++ +++++++.... ...+++.++|.++.++|++
T Consensus 241 ~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 281 (385)
T 1b5p_A 241 WRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTN 281 (385)
T ss_dssp GCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHC
T ss_pred cceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 9999999853 47777776643 3467899999999888853
No 3
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-39 Score=300.86 Aligned_cols=292 Identities=28% Similarity=0.560 Sum_probs=237.9
Q ss_pred cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547 8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87 (311)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~ 87 (311)
+|+...|..... ..+.++.+++.. ... ..++++|+|+.|+|..++.+++++.+.+++.+.+.......|++..
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~-~~~--~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~ 75 (416)
T 1bw0_A 3 SWDVSMSNHAGL----VFNPIRTVSDNA-KPS--PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTV 75 (416)
T ss_dssp -CCCCCCHHHHT----CCCHHHHHHHTC-CCC--CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTT
T ss_pred ccccCchhhhhc----cccHHHHHHHHH-HHh--hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCC
Confidence 588888753332 334577766532 111 1246899999999875556889999999999998765556798888
Q ss_pred CcHHHHHHHHHHHhh------cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547 88 GLPLARRAVAEYLNR------DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161 (311)
Q Consensus 88 g~~~lr~~ia~~l~~------~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~ 161 (311)
|..++|+++++++++ ..|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.
T Consensus 76 ~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~ 154 (416)
T 1bw0_A 76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAG-DYALVPQPGFPHYETVCKAYGIGMHF 154 (416)
T ss_dssp CCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCC-CEEEEcCCCcHhHHHHHHHcCcEEEE
Confidence 999999999999982 25666788999999999999999999999999 99999999999999999999999999
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC----CCC
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST----PYI 237 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~----~~~ 237 (311)
+++.++.++.+|++.|++.++++++++++++|+||||.+++.+++++|+++|++||++||+|++|..+.+++. .+.
T Consensus 155 v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 234 (416)
T 1bw0_A 155 YNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT 234 (416)
T ss_dssp EEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC
T ss_pred eecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCcc
Confidence 9886555678999999999988899999999999999999999999999999999999999999999888775 455
Q ss_pred cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++..++...++++++|+||.|+++|+|+||++++++.... ..+...++......+++++++|+++.++|+
T Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 304 (416)
T 1bw0_A 235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALL 304 (416)
T ss_dssp CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHh
Confidence 6666665567899999999999999999999997641122 124444444322345789999999998886
No 4
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=8.9e-40 Score=305.52 Aligned_cols=279 Identities=18% Similarity=0.260 Sum_probs=237.5
Q ss_pred cccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCC
Q 021547 6 EKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCY 83 (311)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y 83 (311)
.++|...+|++.+. ...+.++++++.. ..+++|+|+.|.|.. .+.+++.+.+++.+.+... ...+|
T Consensus 47 ~~~~~~~~s~~~~~---~~~s~~~~~~~~~-------~~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y 114 (448)
T 3aow_A 47 LGDVERFFSKKALE---MRASEVRELLKLV-------ETSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQY 114 (448)
T ss_dssp TSCGGGGCCHHHHH---CCCCHHHHHHHHH-------HTSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSC
T ss_pred ccchHHHhhHHHhc---CCCcHHHHHHHhc-------cCCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCC
Confidence 46799989988887 7778888887642 146799999998763 3457789999998887643 23479
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547 84 APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163 (311)
Q Consensus 84 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 163 (311)
.+..|..++|+++++++++.+|.+ ++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++
T Consensus 115 ~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~G-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 192 (448)
T 3aow_A 115 GTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPG-DIVVVEAPTYLAALQAFNFYEPQYIQIP 192 (448)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEec
Confidence 988899999999999997777876 78999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCcccCHHHHHhhcC----C--CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC
Q 021547 164 LLPERGWEVDLEAVEALAD----E--NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY 236 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~ 236 (311)
.+.+ ++|++.|++.++ + +++++ ++++|+||||.+++.+++++|+++|++||++||+||+|+.+.|++..+
T Consensus 193 ~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~ 269 (448)
T 3aow_A 193 LDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPE 269 (448)
T ss_dssp EETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCC
T ss_pred cCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC
Confidence 7542 489999999886 5 78887 467899999999999999999999999999999999999999887666
Q ss_pred CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 237 IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
.++..++..+++|++.||||.|+ +|+|+||++++. ++++++..... ...++|+++|++++++|++
T Consensus 270 ~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 335 (448)
T 3aow_A 270 KKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG 335 (448)
T ss_dssp CCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred cCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 67777766678999999999998 999999999853 47777776543 3467799999999998874
No 5
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=3.5e-39 Score=297.26 Aligned_cols=277 Identities=13% Similarity=0.064 Sum_probs=216.2
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSV-RSSMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
...+.++.+...+. +...+++|||+.|.| +..+.+++++.+.+++. .+ ..+...+|.+..|.++||+++++|+
T Consensus 11 ~~~~~i~~~~~~~~----~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 85 (405)
T 3k7y_A 11 IEVDNILKTAREFK----EDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLI 85 (405)
T ss_dssp CCCCHHHHHHHHHT----TSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHh----cCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 45667777776532 224578999999963 22234567899999887 54 4445668999999999999999999
Q ss_pred hhcCCCCCCCCC--EEEeCChHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 101 NRDLPYKLSADD--IYITLGCMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 101 ~~~~g~~~~~~~--v~~t~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
.+..+..+.+++ +++|.|+++|+.+++.++.. .. |+|++++|+|++|...++..|.+++.+++..++++++|++.+
T Consensus 86 ~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 164 (405)
T 3k7y_A 86 FGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLF 164 (405)
T ss_dssp HCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHH
T ss_pred cCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHH
Confidence 877776667775 59999999999999999976 24 899999999999999999999999999985555789999999
Q ss_pred HhhcCC--CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC--CCccccc-CCCCCeEEE
Q 021547 178 EALADE--NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP--YIPMGVF-GSIVPVITL 251 (311)
Q Consensus 178 ~~~l~~--~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~--~~~~~~~-~~~~~~i~i 251 (311)
++.+++ +++++++++| |||||.+++.+++++|+++|++||++||+||+|.++.+++.. ..++..+ ...+++|++
T Consensus 165 ~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 244 (405)
T 3k7y_A 165 LNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVC 244 (405)
T ss_dssp HHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEE
T ss_pred HHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEE
Confidence 998763 5677777665 899999999999999999999999999999999999886421 1222222 234589999
Q ss_pred ecCcccCCCCcceeeEEEeeCCCCccchhhHH----HHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIV----GSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+||||.|+++|+|+||+++.... ++++ +.++.. .....+++.++|.+++.+|++
T Consensus 245 ~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 303 (405)
T 3k7y_A 245 QSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNN 303 (405)
T ss_dssp EECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHC
T ss_pred eeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence 99999999999999999764322 1233 334333 233456778999999888764
No 6
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=9.9e-39 Score=293.37 Aligned_cols=287 Identities=20% Similarity=0.277 Sum_probs=232.5
Q ss_pred cchHHhhHHHHh--hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCC
Q 021547 12 EVKQELNREREA--EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM---FNCYAPM 86 (311)
Q Consensus 12 ~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~---~~~Y~~~ 86 (311)
.++++.+. - .++.+++++....+...+.+++++|+|+.|+|. +++++.+.+++.+.+.... ...|.+.
T Consensus 3 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~ 75 (398)
T 3ele_A 3 VVNESMYQ---LGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSA 75 (398)
T ss_dssp SSCHHHHH---HHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCT
T ss_pred chhHHHhc---cccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCC
Confidence 45555544 3 457777776654333322246789999999854 5678999999999887532 4579888
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 166 (311)
.|..++|+++++++++.+|+++++++|++|+|+++++..++.+++++|.|+|+++.|+|.++...++..|.+++.++++.
T Consensus 76 ~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~ 155 (398)
T 3ele_A 76 QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT 155 (398)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC
Confidence 89999999999999998898889999999999999999999999888768999999999999999999999999998753
Q ss_pred CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH------hCCEEEEeccccCCccCCCCCCccc
Q 021547 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK------LGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~------~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
+++.+|+++|++.++++++++++++|+||||.+++.+++++|+++|++ ||+++|+||+|+.+.+++.....+.
T Consensus 156 -~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 234 (398)
T 3ele_A 156 -EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT 234 (398)
T ss_dssp -TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG
T ss_pred -cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH
Confidence 467899999999999899999999999999999999999999999999 9999999999999988764433322
Q ss_pred ccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 310 (311)
. ..+++++++|+||.|+++|+|+||+++++.. .....+...+..... ...++++++|+++++++++
T Consensus 235 ~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (398)
T 3ele_A 235 K--YYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGA 302 (398)
T ss_dssp G--TCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTC
T ss_pred h--hcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcC
Confidence 2 2457899999999999999999999986542 211224444444322 2456788999999888764
No 7
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.7e-39 Score=300.76 Aligned_cols=274 Identities=20% Similarity=0.365 Sum_probs=235.7
Q ss_pred chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHH
Q 021547 13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPL 91 (311)
Q Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~ 91 (311)
++++.+. ...+.++++++.. .++++|+|+.|+|. +++++.+.+++.+.+.... ..+|++..|..+
T Consensus 6 ~~~~~~~---~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~ 71 (422)
T 3fvs_A 6 QARRLDG---IDYNPWVEFVKLA-------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71 (422)
T ss_dssp SCGGGTT---CCCCHHHHHHHHH-------HTSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHH
T ss_pred HHHHhhc---cCccHHHHHHHHh-------hcCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHH
Confidence 4444444 5566777777542 24689999999964 6788999999999987654 458998889999
Q ss_pred HHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC----
Q 021547 92 ARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP---- 166 (311)
Q Consensus 92 lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---- 166 (311)
+|+++++++++.+|+.+++ ++|++|+|+++++..++.+++++| |+|+++.|+|.++...++..|.+++.+++..
T Consensus 72 lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 72 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEG-DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCC
T ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCC-CEEEEcCCCchhhHHHHHHcCCEEEEEeccccccc
Confidence 9999999999988988888 799999999999999999999999 9999999999999999999999999999865
Q ss_pred ------CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547 167 ------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 167 ------~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
..++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..+.++.
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 230 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIA 230 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred ccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChh
Confidence 23567899999999999999999999999999999999999999999999999999999999999877666666
Q ss_pred ccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 241 VFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 241 ~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
.++. .++++++.|+||.|+++|+|+||+++++ ++++.+..... ..+++++++|++++++|+
T Consensus 231 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (422)
T 3fvs_A 231 SLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFE 293 (422)
T ss_dssp GSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred hcccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHh
Confidence 6653 3689999999999999999999999853 47777776643 456789999999998876
No 8
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.1e-38 Score=289.27 Aligned_cols=275 Identities=24% Similarity=0.410 Sum_probs=230.9
Q ss_pred chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547 13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA 92 (311)
Q Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l 92 (311)
++.+.+. -..+.++++.+... . .+++|+|+.|.+. +++++.+.+++.+.+.... ..|++..|..++
T Consensus 3 ~~~~~~~---~~~~~~~~~~~~~~-~-----~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l 68 (389)
T 1gd9_A 3 LSDRLEL---VSASEIRKLFDIAA-G-----MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLEL 68 (389)
T ss_dssp HHHHHHH---SCCCHHHHHHHHHH-T-----CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHH
T ss_pred hhhHhHh---CChhHHHHHHHHHh-h-----hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHH
Confidence 4545544 45566777765421 1 2579999999864 4578999999999887543 478888899999
Q ss_pred HHHHHHHHhhcCCCCCCCCC-EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547 93 RRAVAEYLNRDLPYKLSADD-IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE 171 (311)
Q Consensus 93 r~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (311)
|+++++++.+.+|+.+++++ |++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...++++.
T Consensus 69 ~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 147 (389)
T 1gd9_A 69 REAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDG-EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR 147 (389)
T ss_dssp HHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTT-CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTC
T ss_pred HHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCC
Confidence 99999999987787778889 9999999999999999999999 999999999999999999999999999876544677
Q ss_pred cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEE
Q 021547 172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVIT 250 (311)
Q Consensus 172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~ 250 (311)
+|++.|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.++.++..++. .+++++
T Consensus 148 ~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T 1gd9_A 148 LNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTIT 227 (389)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEE
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEE
Confidence 8999999999888999999999999999999999999999999999999999999998887654455555543 457899
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+.|+||.|+++|+|+||++++. +++++++.... ..+++++++|+++.++|++
T Consensus 228 ~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 280 (389)
T 1gd9_A 228 VNGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKD 280 (389)
T ss_dssp EEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTC
T ss_pred EecChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 9999999999999999999853 47777776643 3568899999999888864
No 9
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=5.6e-39 Score=296.03 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=224.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~ 121 (311)
.++++|+|+.|+|+ +++++.+.+++.+.+......+|.+..|..++|+++++++.+.+|+.+++ ++|++|+|+++
T Consensus 21 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~ 96 (410)
T 3e2y_A 21 ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYG 96 (410)
T ss_dssp TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH
Confidence 45789999999964 67889999999999876555689988899999999999999888888888 89999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC---------CCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP---------ERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
++..++.+++++| |+|+++.|+|..+...++..|.+++.+++.+ ..++.+|++++++.++++++++++++
T Consensus 97 a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 175 (410)
T 3e2y_A 97 SLFNSIQGLVDPG-DEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNT 175 (410)
T ss_dssp HHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEES
T ss_pred HHHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeC
Confidence 9999999999999 9999999999999999999999999998763 24567899999999998999999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++++++.|+||.|+++|+|+||++++
T Consensus 176 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 255 (410)
T 3e2y_A 176 PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP 255 (410)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC
Confidence 9999999999999999999999999999999999999988766666665543 467999999999999999999999985
Q ss_pred CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
. ++++.+..... ..+++++++|++++++|+
T Consensus 256 ~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (410)
T 3e2y_A 256 A--------HLIKHLQTVQQNSFYTCATPLQAALAEAFW 286 (410)
T ss_dssp H--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHHHhhccCCChHHHHHHHHHHH
Confidence 3 47777776643 456789999999998876
No 10
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-38 Score=290.29 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=220.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|.+. ++.++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus 28 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a 102 (388)
T 1j32_A 28 EGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQS 102 (388)
T ss_dssp TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred cCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHH
Confidence 46889999999864 557899999999888654 3479888899999999999999888888888999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.++....+++.+|++.|++.++++++++++++|+||||.+++
T Consensus 103 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 181 (388)
T 1j32_A 103 IFNLMLAMIEPG-DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT 181 (388)
T ss_dssp HHHHHHHHCCTT-CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCC
Confidence 999999999999 9999999999999999999999999998765456789999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
.+++++|+++|+++|+++|+|++|+.+.+++.++.++..++. .++++++.|+||.|+++|+|+||++++.
T Consensus 182 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~-------- 253 (388)
T 1j32_A 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV-------- 253 (388)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH--------
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCH--------
Confidence 999999999999999999999999999887765556555543 4578999999999999999999999753
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++++.+..... .+.++++++|+++.+.|+
T Consensus 254 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 283 (388)
T 1j32_A 254 PLVKAATKIQGHSTSNVCTFAQYGAIAAYE 283 (388)
T ss_dssp HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 47777776633 456788999998888775
No 11
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.4e-38 Score=291.43 Aligned_cols=255 Identities=18% Similarity=0.318 Sum_probs=214.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~ 121 (311)
.++++|+|+.|.+. +++++.+.+++.+.+.......|.+..|..++|+++++++.+.+|.++++ ++|++|+|+++
T Consensus 35 ~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~ 110 (412)
T 2x5d_A 35 RGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE 110 (412)
T ss_dssp TTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHH
T ss_pred cCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHH
Confidence 47889999999864 55789999999988765434579888899999999999998877877787 79999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.....++.+|++.|++.++++++++++++|+||||.++
T Consensus 111 a~~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~ 189 (412)
T 2x5d_A 111 GLAHLMLATLDHG-DTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCV 189 (412)
T ss_dssp HHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcC
Confidence 9999999999999 999999999999999999999999999876544666899999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|++||++||+|++|..+.+++.++.++..++. .++++++.|+||.|+++|+|+||++++.
T Consensus 190 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------- 261 (412)
T 2x5d_A 190 ELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP-------- 261 (412)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH--------
Confidence 9999999999999999999999999999887655555555543 4578999999999999999999999842
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... .++++++++|+++.++|++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 262 ELVSALARIKSYHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 47777776543 3567899999999988864
No 12
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-39 Score=298.99 Aligned_cols=255 Identities=22% Similarity=0.367 Sum_probs=220.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|.|+ +++++.+.+++.+++......+|++..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus 55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a 130 (447)
T 3b46_A 55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 36789999999864 56789999999999875334589988899999999999999888888888999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC----------CcccCHHHHHhhcCCCccEEEEeC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER----------GWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
+.+++.+++++| |+|+++.|+|..+...++..|.+++.+++.+.+ ++.+|+++|++.++++++++++++
T Consensus 131 l~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 209 (447)
T 3b46_A 131 ILSCLMGLLNAG-DEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINT 209 (447)
T ss_dssp HHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEES
T ss_pred HHHHHHHHcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeC
Confidence 999999999999 999999999999999999999999999876542 578999999999988999999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
|+||||.+++.+++++|+++|++||++||+||+|..+.|++ ++.++..++ ..++++++.|+||.|+++|+|+||+++
T Consensus 210 p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~ 288 (447)
T 3b46_A 210 PHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLS 288 (447)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEEC
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEe
Confidence 99999999999999999999999999999999999998876 434444441 235789999999999999999999998
Q ss_pred eCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 271 NDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
.++ ++++.+.... ...+++++++|++++++|++
T Consensus 289 ~~~-------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~ 322 (447)
T 3b46_A 289 LNA-------ELLSYAAKAHTRICFASPSPLQEACANSIND 322 (447)
T ss_dssp SCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred CCH-------HHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence 322 4777777653 34567899999998888763
No 13
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.4e-38 Score=294.80 Aligned_cols=280 Identities=17% Similarity=0.155 Sum_probs=222.7
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEY 99 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 99 (311)
...+.++.+...+.+. ..+++|+|+.| +|. ...++++.+.+++.+.+......+|.+..|..++|++++++
T Consensus 31 ~~~~~i~~~~~~~~~~----~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 104 (420)
T 4f4e_A 31 APRDPILGLNEAFNAD----TRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKL 104 (420)
T ss_dssp CCCCHHHHHHHHHHHC----CCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHhc----CCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHH
Confidence 5667788888764332 45789999999 554 23556699999999998865556899999999999999999
Q ss_pred HhhcCCCCCCCC--CEEEeCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547 100 LNRDLPYKLSAD--DIYITLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 100 l~~~~g~~~~~~--~v~~t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 175 (311)
+....+..++++ +|++|+|+++++.+++ .+++++| |+|+++.|+|.+|...++..|.+++.++....+++.+|++
T Consensus 105 l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 183 (420)
T 4f4e_A 105 LLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPK-AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFD 183 (420)
T ss_dssp HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHH
T ss_pred hcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCC-CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHH
Confidence 987555444677 8999999999999994 4667899 9999999999999999999999999999855567889999
Q ss_pred HHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCccccc-CCCCCeEE
Q 021547 176 AVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVF-GSIVPVIT 250 (311)
Q Consensus 176 ~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~-~~~~~~i~ 250 (311)
.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+ +..+++|+
T Consensus 184 ~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 263 (420)
T 4f4e_A 184 GMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFV 263 (420)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEE
Confidence 9999887 5788899999999999999999999999999999999999999999988742 23333333 23568999
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
++|+||.|+++|+|+||+++....... ...+...++... ....+++.++|.+++.+|++
T Consensus 264 ~~S~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (420)
T 4f4e_A 264 SSSFSKSFSLYGERVGALSIITDSKDE-AARVLSQLKRVIRTNYSNPPTHGGAIVAAVLAS 323 (420)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHC
T ss_pred EEeCCccCcCcCCCcEEEEEEcCCHHH-HHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcC
Confidence 999999999999999999763321000 001233444432 33456789999999887764
No 14
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=4.5e-38 Score=288.69 Aligned_cols=272 Identities=23% Similarity=0.334 Sum_probs=225.6
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
-.+..++.+... .+.+.+.+++++|+|+.|++. ++.++.+.+++.+.+. ...+|++..|..++|+++++++.+
T Consensus 9 ~~~~~~~~~~~~-~~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~ 81 (396)
T 3jtx_A 9 LKPYPFARLHEA-MQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANWLKR 81 (396)
T ss_dssp CCSCHHHHHHHH-TTTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHH-HHhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHHHHH
Confidence 344555555543 333444468999999999854 6788999999998875 345799888999999999999999
Q ss_pred cCCCC-CCCC-CEEEeCChHHHHHHHHHHHhcCCC----CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHH
Q 021547 103 DLPYK-LSAD-DIYITLGCMEAVEIILTVITRLGA----ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA 176 (311)
Q Consensus 103 ~~g~~-~~~~-~v~~t~g~~~a~~~~~~~l~~~g~----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 176 (311)
.+|+. ++++ +|++|+|+++++.+++.+++++|. |+|+++.|+|.++...++..|.+++.+++ ..+++.+|++.
T Consensus 82 ~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~ 160 (396)
T 3jtx_A 82 RYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRS 160 (396)
T ss_dssp HTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGG
T ss_pred hcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHH
Confidence 88887 7888 999999999999999999998873 69999999999999999999999999998 55677889999
Q ss_pred HHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc----cC-CCCCeEEE
Q 021547 177 VEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV----FG-SIVPVITL 251 (311)
Q Consensus 177 l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~----~~-~~~~~i~i 251 (311)
|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+..... +. ..++++++
T Consensus 161 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (396)
T 3jtx_A 161 ISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMF 240 (396)
T ss_dssp SCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEE
T ss_pred HHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEE
Confidence 99988889999999999999999999999999999999999999999999999887633322211 11 24678999
Q ss_pred ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
.|+||.|+++|+|+||++++. ++++.+..... .++++++++|+++.++|++
T Consensus 241 ~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (396)
T 3jtx_A 241 TSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD 292 (396)
T ss_dssp EESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC
T ss_pred eccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC
Confidence 999999999999999998742 47777776643 3567899999999988864
No 15
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.9e-38 Score=286.95 Aligned_cols=271 Identities=20% Similarity=0.298 Sum_probs=227.5
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
...+.++++.....+... .++++|+|+.|.+. ++.++.+.+++.+.+.... ..|.+..|..++|+++++++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~ 93 (389)
T 1o4s_A 21 IPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGE 93 (389)
T ss_dssp SCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 555667766654433221 36789999999864 4568999999999886543 4788878999999999999988
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+|.++++++|++|+|+++++..++.+++++| |+|+++.|+|.++...++..|.+++.++...++++.+|+++|++.++
T Consensus 94 ~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (389)
T 1o4s_A 94 RYKKDISPDQVVVTNGAKQALFNAFMALLDPG-DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV 172 (389)
T ss_dssp HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred HhCCCCCHHHEEEecCHHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence 77877788999999999999999999999999 99999999999999999999999999988654567899999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~ 261 (311)
++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++ +..++..++. .++++++.|+||.|+++
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 251 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMT 251 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCG
T ss_pred cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCc
Confidence 889999999999999999999999999999999999999999999988765 3334444443 45789999999999999
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+|+||+++++ ++++.+..... ..+++++++|.++.++|++
T Consensus 252 G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 293 (389)
T 1o4s_A 252 GWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEV 293 (389)
T ss_dssp GGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred ccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHHhc
Confidence 99999999853 47777776643 3467899999999888864
No 16
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=5.9e-38 Score=287.68 Aligned_cols=263 Identities=19% Similarity=0.310 Sum_probs=214.8
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 104 (311)
++.++.++....+ +.+ +++++|+|+.|.+. ++.++.+.+++.+.+.... ..|.+..|..++|+++++++++.+
T Consensus 13 ~~~~~~~~~~~~~-~~~-~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~ 85 (391)
T 3h14_A 13 PFIVMDVMEAARR-AEE-AGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARLYGEWY 85 (391)
T ss_dssp CCTTHHHHHHHHH-HHH-TTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH-HHh-cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHHHHHHh
Confidence 4455555543322 221 47899999999854 6678999999999886543 479888899999999999999988
Q ss_pred CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.+++..+.++.+|++.+++. +
T Consensus 86 g~~~~~~~v~~t~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~ 161 (391)
T 3h14_A 86 GVDLDPGRVVITPGSSGGFLLAFTALFDSG-DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---D 161 (391)
T ss_dssp CCCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---C
T ss_pred CCCCCHHHEEEecChHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---C
Confidence 988899999999999999999999999999 999999999999999999999999999987666778899999887 7
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++... .+..+ .+++++++|+||.++++|+|
T Consensus 162 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~G~r 238 (391)
T 3h14_A 162 LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMTGWR 238 (391)
T ss_dssp CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCTTSC
T ss_pred CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCccce
Confidence 8999999999999999999999999999999999999999999998876532 32222 45789999999999999999
Q ss_pred eeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 265 FGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+||++++. ++++.+..... .+.++++++|+++.+.++
T Consensus 239 ~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 239 VGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD 276 (391)
T ss_dssp CEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred eEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence 99999854 36677666533 456788999998877664
No 17
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.1e-37 Score=286.85 Aligned_cols=280 Identities=14% Similarity=0.145 Sum_probs=218.3
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
.++.++.+.+.+.+ ...+.+|+|+.|.| +..+..+..+.+.+++.+........+|.+..|.+++|+++++++++
T Consensus 11 ~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 86 (401)
T 7aat_A 11 PPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALG 86 (401)
T ss_dssp CCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred CCChhHHHHHHHhh----CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcC
Confidence 34556666654322 24567999999987 43333345578899988877644456899989999999999999998
Q ss_pred cCCCCCCCCCEEE--eCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 103 DLPYKLSADDIYI--TLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 103 ~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
.+|+.+++++|++ |+|+++++.+++.++. ++| |+|+++.|+|.+|...++..|.+++.+++...+++.+|++.+
T Consensus 87 ~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 165 (401)
T 7aat_A 87 ENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFS-RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGA 165 (401)
T ss_dssp TTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTC-CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHH
T ss_pred CCccccccCceEEEecCcchHHHHHHHHHHHHhccCC-CEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHH
Confidence 8887778999987 9999999999887775 889 999999999999999999999999999986656788999966
Q ss_pred HhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc-CCCCCeEEE
Q 021547 178 EALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF-GSIVPVITL 251 (311)
Q Consensus 178 ~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~-~~~~~~i~i 251 (311)
++.+. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++. +..++..+ ....++|++
T Consensus 166 ~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (401)
T 7aat_A 166 MEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLS 245 (401)
T ss_dssp HHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEE
T ss_pred HHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEE
Confidence 66553 5788999999999999999999999999999999999999999999887643 12222222 345578999
Q ss_pred ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547 252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~ 309 (311)
+|+||.|+++|+|+||++++...... ...+++.++... ....+++.++|.+++++++
T Consensus 246 ~S~sK~~~~~G~RiG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (401)
T 7aat_A 246 QSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARIASLILN 303 (401)
T ss_dssp EECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred ecCCcccccccCceEEEEEEeCCHHH-HHHHHHHHHHHHHhccCCCChHHHHHHHHHhC
Confidence 99999999999999999874322110 012455555543 2345677888888887764
No 18
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-37 Score=285.54 Aligned_cols=252 Identities=26% Similarity=0.423 Sum_probs=217.3
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~ 123 (311)
.++|+|+.|.+. +++++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus 25 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al 99 (411)
T 2o0r_A 25 IGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAI 99 (411)
T ss_dssp TTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHH
T ss_pred CCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHH
Confidence 468999999864 557899999999998753 45798888999999999999998888878888 999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
.+++.+++++| |+|+++.|+|.++...++..|.+++.++...+ .++.+|++.|++.++++++++++++|+||||.+++
T Consensus 100 ~~~~~~~~~~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~ 178 (411)
T 2o0r_A 100 AAAVLGLVEPG-SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLS 178 (411)
T ss_dssp HHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCC
Confidence 99999999999 99999999999999999999999999987543 35679999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|+++|++||+|++|..+.+++..+.++..++. .++++++.|+||.++++|+|+||++++. +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 250 (411)
T 2o0r_A 179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--------E 250 (411)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--------H
Confidence 999999999999999999999999999887765556655543 4578999999999999999999999842 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.+..... ..+++++++|+++.++|++
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 280 (411)
T 2o0r_A 251 LIAGVRAAKQYLSYVGGAPFQPAVALALDT 280 (411)
T ss_dssp HHHHHHHHHHHHTSCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence 6777766532 3456788899998888763
No 19
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.2e-37 Score=289.20 Aligned_cols=273 Identities=21% Similarity=0.214 Sum_probs=221.5
Q ss_pred ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHH-------------HHHHHHHH
Q 021547 9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVA-------------EDAIVDSV 75 (311)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~-------------~~a~~~~~ 75 (311)
|...+|++.+. ..++.++++.+...+ .++++|+|+.|.|+.. .+|. ... .+.....
T Consensus 3 ~~~~~s~~~~~---~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~-~~p~-~~~~~~~~~~~~~~~~~~~~~~~- 71 (425)
T 2r2n_A 3 YARFITAASAA---RNPSPIRTMTDILSR-----GPKSMISLAGGLPNPN-MFPF-KTAVITVENGKTIQFGEEMMKRA- 71 (425)
T ss_dssp GGGGSCHHHHT---CCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGG-GCSE-EEEEEEETTSCCEEECHHHHHHH-
T ss_pred hhHHHHHHHhc---CCCchHHHHHHHhhc-----CCCCeEEcCCcCCCch-hCCH-HHHHHHHhhcccccccccchhhh-
Confidence 55667877777 677788887765322 1467999999988631 1221 100 1111111
Q ss_pred hcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch
Q 021547 76 RSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-------ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY 148 (311)
Q Consensus 76 ~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~ 148 (311)
.+|.+..|.+++|+++++++.+.+|.... +++|++|+|+++++.+++.+++++| |+|+++.|+|..+
T Consensus 72 -----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~ 145 (425)
T 2r2n_A 72 -----LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPG-DNVLLDEPAYSGT 145 (425)
T ss_dssp -----TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTT-CEEEEESSCCHHH
T ss_pred -----cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCC-CEEEEeCCCcHHH
Confidence 37999999999999999999988887764 3799999999999999999999999 9999999999999
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC------------CCccEEEE-eCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD------------ENTAAIVI-INPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------------~~~~~i~i-~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
...++..|.+++.++.+. .++|++.|++.++ ++++++++ ++|+||||.+++.+++++|+++|++
T Consensus 146 ~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 146 LQSLHPLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222 (425)
T ss_dssp HHHHGGGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999998743 2589999999876 35787766 5889999999999999999999999
Q ss_pred hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-ccc
Q 021547 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRS 294 (311)
Q Consensus 216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~ 294 (311)
||++||+||+|+.+.|++.++.++..++..+++|+++|+||.|+ +|+|+||+++++ ++++.+..... ..+
T Consensus 223 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~ 293 (425)
T 2r2n_A 223 YDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTL 293 (425)
T ss_dssp TTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTC
T ss_pred cCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcC
Confidence 99999999999999888766667767766678999999999998 999999999864 47777777643 457
Q ss_pred CCCchhHHHHHhhhhc
Q 021547 295 GPSTLIQVCEMFLLVN 310 (311)
Q Consensus 295 ~~~~~~q~~~~~~l~~ 310 (311)
++|+++|+++.++|++
T Consensus 294 ~~~~~~q~a~~~~l~~ 309 (425)
T 2r2n_A 294 HPSTFNQLMISQLLHE 309 (425)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 8899999999988863
No 20
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=3.6e-37 Score=291.62 Aligned_cols=259 Identities=20% Similarity=0.317 Sum_probs=218.2
Q ss_pred CCeeecCCCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFR-------------------------TAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAV 96 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~-------------------------~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~i 96 (311)
.++|+.++|+|..++..+ .|+.+.+++.+.+... ....|.+..|..++|+++
T Consensus 64 ~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 143 (500)
T 3tcm_A 64 DEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAI 143 (500)
T ss_dssp SSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHH
T ss_pred HHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHH
Confidence 389999999985443321 3455666666666542 456899999999999999
Q ss_pred HHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547 97 AEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 97 a~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 175 (311)
++++.+++|+++++++|++|+|+++++..++.+++ ++| |.|+++.|+|..|...++..|.+++.++++.+.+|.+|++
T Consensus 144 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 222 (500)
T 3tcm_A 144 ASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEK-DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETS 222 (500)
T ss_dssp HHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTT-EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHH
T ss_pred HHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCC-CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 99999888988999999999999999999999998 799 9999999999999999999999999999887778899999
Q ss_pred HHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccc----cc--
Q 021547 176 AVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMG----VF-- 242 (311)
Q Consensus 176 ~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~----~~-- 242 (311)
.|++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.|++ .++.++. .+
T Consensus 223 ~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~ 302 (500)
T 3tcm_A 223 DVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGY 302 (500)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcc
Confidence 99998876 78899999999999999999999999999999999999999999998864 3444433 22
Q ss_pred -CCCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 243 -GSIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 -~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
....++|+++|+||.| |++|+|+||+++.... +++++.+........+++.++|++++.+++
T Consensus 303 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~ 366 (500)
T 3tcm_A 303 GEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILASLVMN 366 (500)
T ss_dssp SSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred ccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHHHHHhc
Confidence 3344689999999998 8999999999984211 137788777766567889999999998875
No 21
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-37 Score=286.01 Aligned_cols=258 Identities=27% Similarity=0.466 Sum_probs=217.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++++|+|+.|.|..+ .++.++.+.+++.+.+.... ..|++..|..++|+++++++.+.+|+++++++|++|+|++++
T Consensus 36 ~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a 113 (406)
T 1xi9_A 36 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA 113 (406)
T ss_dssp TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence 3688999999986311 25678999999998886543 378888899999999999999888888889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+.++++.+|++.|++.++++++++++++|+||||.+++
T Consensus 114 l~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 192 (406)
T 1xi9_A 114 LQLIFGALLDPG-DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYD 192 (406)
T ss_dssp HHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHhCCCC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcC
Confidence 999999999999 9999999999999999999999999998865456789999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCcccCCCCcceeeEEE--eeCCCCccch
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGWLA--TNDPNGVLQK 279 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~i~--~~~~~~~~~~ 279 (311)
.+++++|+++|+++|++||+|++|+.+.+++ +..++..++ .++ +|+++|+||.++++|+|+||++ ++.+. .
T Consensus 193 ~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----~ 266 (406)
T 1xi9_A 193 KKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK----L 266 (406)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT----T
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchh----H
Confidence 9999999999999999999999999988743 334455554 456 8999999999999999999998 54210 0
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++++.......+++++++|+++.++|+
T Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 267 SEVREAIDRLARIRLCPNTPAQFAAIAGLT 296 (406)
T ss_dssp HHHHHHHHHHHHHTCCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 036777766543226789999999998885
No 22
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=9.9e-38 Score=284.73 Aligned_cols=253 Identities=18% Similarity=0.239 Sum_probs=214.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
.++++|+|+.|.+. ++.++.+.+++.+.+.......|++..|..++|+++++++.+.+|.+++++ +|++|+|+++
T Consensus 23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 47889999999864 456899999999988654345787766889999999999988778777776 9999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++.+++.+++++| |+|+++.|+|.++...++..|.+++.++. .+++.+|++.+++.++++++++++++|+||||.++
T Consensus 99 a~~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 175 (376)
T 2dou_A 99 GLAHLLLALTEPE-DLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA 175 (376)
T ss_dssp HHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred HHHHHHHHhcCCC-CEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence 9999999999999 99999999999999999999999999987 45667899999988877889999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
+.+++++|+++|++||+++|+||+|..+.+++.....+...+..++++++.|+||.|+++|+|+||++++. +
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 247 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------E 247 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------H
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------H
Confidence 99999999999999999999999999988866332223322334578999999999999999999998743 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.++.... .+.++++++|+++.++|++
T Consensus 248 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 248 ALARLERVKGVIDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp HHHHHHHHHHHHCCCSCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHhC
Confidence 7777776543 3456789999999988864
No 23
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=4.2e-37 Score=282.32 Aligned_cols=275 Identities=17% Similarity=0.157 Sum_probs=218.7
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHH
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEY 99 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~ 99 (311)
+.+.++.+...+ .+...+++|+|+.| +|. ...+.++.+.+++.+ .+......+|.+..|..++|++++++
T Consensus 9 ~~~~~~~~~~~~----~~~~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 82 (397)
T 3fsl_A 9 AGDPILTLMERF----KEDPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL 82 (397)
T ss_dssp CCCHHHHHHHHH----HTCCCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCchhhHHHHH----hcCCCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHH
Confidence 455666666543 22356789999999 544 235566999999999 88765556899889999999999999
Q ss_pred HhhcCCCCCCCC--CEEEeCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547 100 LNRDLPYKLSAD--DIYITLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 100 l~~~~g~~~~~~--~v~~t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 175 (311)
+....+..++++ +|++|+|+++++..++ .+++++| |+|+++.|+|.++...++..|.+++.++....+++.+|++
T Consensus 83 ~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 161 (397)
T 3fsl_A 83 LFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN 161 (397)
T ss_dssp HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHH
T ss_pred HhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHH
Confidence 987655444678 8999999999999995 4567899 9999999999999999999999999998855567899999
Q ss_pred HHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccccc-CCCCCeEE
Q 021547 176 AVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVF-GSIVPVIT 250 (311)
Q Consensus 176 ~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~-~~~~~~i~ 250 (311)
.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+ +..+++|+
T Consensus 162 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (397)
T 3fsl_A 162 DLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALV 241 (397)
T ss_dssp HHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEE
Confidence 9999887 567888999999999999999999999999999999999999999988863 222333333 34568999
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHH----HHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG----SIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++|+||.|+++|+|+||++++... ++++. .++.. .....+++.++|.+++.++++
T Consensus 242 ~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 301 (397)
T 3fsl_A 242 SNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND 301 (397)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTS
T ss_pred EecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence 999999999999999999874322 12333 33333 233456788999999887764
No 24
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.9e-37 Score=288.20 Aligned_cols=272 Identities=20% Similarity=0.231 Sum_probs=227.9
Q ss_pred hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547 24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103 (311)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 103 (311)
.++.++.++....+ +.+..++++|+|+.|.+. +++++.+.+++.+.+.......|.+..|..++|+++++++++.
T Consensus 24 ~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~ 98 (437)
T 3g0t_A 24 GMASIRDLVALVTN-LEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLF 98 (437)
T ss_dssp GGCCHHHHHHHHHH-HHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH-HHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHh
Confidence 35667777765433 222247899999999864 5788999999999887654358999889999999999999988
Q ss_pred CCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCC--EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 104 LPYKLSADDIYITLGCMEAVEIILTVIT--RLGAA--NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
+|+.+++++|++|+|+++++.+++.+++ ++| | +|+++.|+|.++...++..|.+++.+++. .+++.+|++.|++
T Consensus 99 ~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~g-d~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~ 176 (437)
T 3g0t_A 99 VNIDIPARACVPTVGSMQGCFVSFLVANRTHKN-REYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLES 176 (437)
T ss_dssp HCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTT-CSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHH
T ss_pred hCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCC-CccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHH
Confidence 8988899999999999999999999998 999 9 99999999999999999999999999986 4567789999999
Q ss_pred hc-CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC----cc-cccCC-CCCeEEEe
Q 021547 180 LA-DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI----PM-GVFGS-IVPVITLG 252 (311)
Q Consensus 180 ~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~----~~-~~~~~-~~~~i~i~ 252 (311)
.+ +++++++++++|+||||.+++.+++++|+++|++||++||+|++|+.+.+++.... ++ ..+.. .++++++.
T Consensus 177 ~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (437)
T 3g0t_A 177 YLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILAL 256 (437)
T ss_dssp HHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEE
T ss_pred HHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEE
Confidence 98 77899999999999999999999999999999999999999999999887643221 11 33333 56789999
Q ss_pred cCcccCCCCcceeeEEEeeCCCCccchhhHHH-H-----------------Hhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVG-S-----------------IKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||.++++|+|+||++++. ++++ . +..... ..+++++++|+++.++|++
T Consensus 257 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 325 (437)
T 3g0t_A 257 SSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA 325 (437)
T ss_dssp ESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH
T ss_pred cCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC
Confidence 99999999999999999853 3556 5 555432 3568899999999988764
No 25
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3e-37 Score=286.44 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=219.2
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME 121 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~ 121 (311)
+++|+|+.|.+. +++++.+.+++.+.+... ....|++..|..++|+++++++++.+|.+++++ +|++|+|+++
T Consensus 37 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~ 112 (429)
T 1yiz_A 37 YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYE 112 (429)
T ss_dssp HCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred CCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHH
Confidence 478999999864 457899999999988652 234788878999999999999988778778888 9999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC--------CcccCHHHHHhhcCCCccEEEEeCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
++.+++.+++++| |+|+++.|+|..+...++..|.+++.++..... ++.+|++.|++.++++++++++++|
T Consensus 113 a~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 191 (429)
T 1yiz_A 113 ALYATIQGHVDEG-DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP 191 (429)
T ss_dssp HHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence 9999999999999 999999999999999999999999999876542 5679999999999888999999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+||||.+++.+++++|+++|++||++||+||+|..+.+++.++.++..+. ..++++++.|+||.|+++|+|+||++++.
T Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 271 (429)
T 1yiz_A 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE 271 (429)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence 99999999999999999999999999999999999988776555665553 35578999999999999999999999853
Q ss_pred CCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 273 PNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+.... ..++++++++|+++.++|++
T Consensus 272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence 4777777653 34567899999999888864
No 26
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=292.59 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=205.3
Q ss_pred CCeeecCCCCCCCCCCCC---------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFR---------------------TAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~---------------------~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
.++|++++|+|..+...+ .|..+.+++.+.+... ....|+++.|..++|+++++++
T Consensus 63 ~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 142 (498)
T 3ihj_A 63 TEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI 142 (498)
T ss_dssp SSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred hhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 499999999986432211 1444455556666532 3457999999999999999999
Q ss_pred hhcC-CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547 101 NRDL-PYKLSADDIYITLGCMEAVEIILTVITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE 175 (311)
Q Consensus 101 ~~~~-g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 175 (311)
.+++ |+++++++|++|+|+++++..++.+++++| | .|+++.|+|+.|...++..|.+++.++++.+++|.+|++
T Consensus 143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~g-d~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~ 221 (498)
T 3ihj_A 143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGG-GKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVN 221 (498)
T ss_dssp HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCC-GGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHH
T ss_pred HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCC-CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHH
Confidence 9888 488899999999999999999999999887 5 999999999999999999999999999987778999999
Q ss_pred HHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccC------
Q 021547 176 AVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFG------ 243 (311)
Q Consensus 176 ~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~------ 243 (311)
+|++.+++ +++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.|++. ++.++..+.
T Consensus 222 ~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~ 301 (498)
T 3ihj_A 222 ELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPE 301 (498)
T ss_dssp HHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHH
T ss_pred HHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccc
Confidence 99998876 589999999999999999999999999999999999999999999999753 555554431
Q ss_pred --CCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 244 --SIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 --~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
...++|+++|+||.| |++|+|+||+++.... +++++.+........+++.++|.+++.+++
T Consensus 302 ~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~ 365 (498)
T 3ihj_A 302 YSSNVELASFHSTSKGYMGECGYRGGYMEVINLH-----PEIKGQLVKLLSVRLCPPVSGQAAMDIVVN 365 (498)
T ss_dssp HHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-----HHHHHHHHHHHHHSCCCCHHHHHHHHHHTC
T ss_pred ccCceeEEEEeccccccccCcccceEEEEEecCC-----HHHHHHHHHHHhccCCCCHHHHHHHHHHhc
Confidence 234689999999999 7899999999852211 257888877766567889999999998875
No 27
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5.9e-37 Score=280.54 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=217.3
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV 123 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~ 123 (311)
+++|+|+.|.+. +++++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 468999999864 557899999999988753 34798888999999999999988888888888 999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
.+++.+++++| |+|+++.|+|..+...++..|.+++.++...+ ++.+|++.|++.++++++++++++|+||||.+++.
T Consensus 105 ~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 182 (386)
T 1u08_A 105 YAAITALVRNG-DEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ 182 (386)
T ss_dssp HHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCH
Confidence 99999999999 99999999999999999999999999987543 57899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
+++++|+++|+++|+++|+|++|+.+.+++.++.++..++ ..++++++.|+||.|+++|+|+||++++. ++
T Consensus 183 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 254 (386)
T 1u08_A 183 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI 254 (386)
T ss_dssp HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HH
Confidence 9999999999999999999999999988776555554442 24578999999999999999999999853 47
Q ss_pred HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... ..+++++++|+++.++|++
T Consensus 255 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (386)
T 1u08_A 255 SAEIRKVHQYLTFSVNTPAQLALADMLRA 283 (386)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCChHHHHHHHHHHhC
Confidence 777776543 3567789999999888864
No 28
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.4e-37 Score=283.54 Aligned_cols=249 Identities=21% Similarity=0.299 Sum_probs=218.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|++. +++++.+.+++.+.+... ...|++ .+ .++|+++++++++.+|+.+++++|++|+|++++
T Consensus 21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 47899999999853 678999999999998754 347888 77 899999999999888888899999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|.++...++..|.+++.++.... +|++.|++.++++++++++++|+||||.+++
T Consensus 94 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 94 LYIAIDHFTPAQ-SKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp HHHHHHHHSCTT-CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhcCCC-CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence 999999999999 99999999999999999999999999987543 8999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
.+++++|+++|++||+++|+|++|..+.+++ ..+.++..++..++++++.|+||.+|++|+|+||+++.++ +
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------~ 241 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------S 241 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-------H
Confidence 9999999999999999999999999998877 5555665554456789999999999999999999988553 4
Q ss_pred HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.++.... .+.++++++|+++.+.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 242 DAEHWQQLSPVIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp HHHHHHHSCHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHhc
Confidence 7777776643 3568899999998887764
No 29
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.7e-37 Score=283.40 Aligned_cols=253 Identities=21% Similarity=0.234 Sum_probs=219.8
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVE 124 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~ 124 (311)
.+|+|+.|++. .+++++.+++++.+.+.......|.+..|..++++++++++.+.+|.++++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999865 367889999999998875444468888899999999999999988887766 79999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC----CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP----ERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
.++.+++++| |+|+++.|+|.++...++..|.+++.+++.. .+++.+|++.|++.++++++++++++|+||||.+
T Consensus 117 ~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 195 (407)
T 3nra_A 117 LAVAATVARG-DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVV 195 (407)
T ss_dssp HHHHTTCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCC
T ss_pred HHHHHhCCCC-CEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcc
Confidence 9999999999 9999999999999999999999999998742 3567899999999998899999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
++.+++++|+++|++||+++|+|++|+.+.+++..+.++..++ ..++++++.|+||.|+++|+|+||++++.
T Consensus 196 ~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 269 (407)
T 3nra_A 196 YSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------ 269 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH------
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH------
Confidence 9999999999999999999999999999998877766666653 35578999999999999999999999742
Q ss_pred hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++.... ...++++++|+++.++|++
T Consensus 270 --~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (407)
T 3nra_A 270 --AIIARMEKLQAIVSLRAAGYSQAVLRGWFDE 300 (407)
T ss_dssp --HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC
T ss_pred --HHHHHHHHHHhhhccCCChHHHHHHHHHHhc
Confidence 47777776633 4456788899988887753
No 30
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=3e-36 Score=277.65 Aligned_cols=281 Identities=19% Similarity=0.291 Sum_probs=228.8
Q ss_pred ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 021547 9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPM 86 (311)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~ 86 (311)
|+..++++.+. -..+.+++++....+ ++ ..+.++|+|+.|.|.. ...+++.+.+++.+.+... ... |.+.
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~ 74 (407)
T 2zc0_A 3 YTKYLAGRANW---IKGSALADVMKKASE-LQ-KKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPA 74 (407)
T ss_dssp GGGGSCGGGGG---CCCCHHHHHHHHHHH-HH-HSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCT
T ss_pred chhhhhhhhcc---CCchHHHHHHHhhhc-cc-CCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCC
Confidence 44445655555 455667777764332 11 1356899999998753 2346789999999888653 234 8888
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 166 (311)
.|..++|+++++++.+.+|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+.
T Consensus 75 ~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~ 153 (407)
T 2zc0_A 75 NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPG-DVVITENPSYINTLLAFEQLGAKIEGVPVDN 153 (407)
T ss_dssp TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEET
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEcccCC
Confidence 899999999999998878877888999999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCcccCHHHHHhhcC----C--CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547 167 ERGWEVDLEAVEALAD----E--NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM 239 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~ 239 (311)
. ++|++.|++.++ + +++++ ++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.++.++
T Consensus 154 ~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 230 (407)
T 2zc0_A 154 D---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPL 230 (407)
T ss_dssp T---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCG
T ss_pred C---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCCh
Confidence 2 489999999887 5 77887 467899999999999999999999999999999999999988876655566
Q ss_pred cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
..++..+++++++|+||.++ +|+|+||++++. ++++.++.... ...++++++|.++.++|++
T Consensus 231 ~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 293 (407)
T 2zc0_A 231 KALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKR 293 (407)
T ss_dssp GGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHc
Confidence 66655568999999999998 999999999852 47777776643 3456799999999988864
No 31
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8.7e-38 Score=288.68 Aligned_cols=279 Identities=18% Similarity=0.140 Sum_probs=218.2
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~ 101 (311)
..++.++.++....+...+.+++++|+|++|+| +..+.+++++.+.+++.+.... ....|.+..|..++|+++++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~la~~~~ 93 (413)
T 3t18_A 15 NGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKIVIDTLF 93 (413)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHHHHHHHh
Confidence 455667777665433333334678999999986 2223577889999988764322 23479888899999999999997
Q ss_pred hcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 102 RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 102 ~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...+.. .+++|++|+|+++++..++.+++++| |+|+++.|+|..|...++..|.+++.+++.+. ++.+|++.|++.+
T Consensus 94 ~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l 170 (413)
T 3t18_A 94 GPYKPE-GYISAIATPGGTGAIRSAIFSYLDEG-DPLICHDYYWAPYRKICEEFGRNFKTFEFFTD-DFAFNIDVYKEAI 170 (413)
T ss_dssp GGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSS-CEEEEESSCCTHHHHHHHHHTCEEEEECCBCT-TSSBCHHHHHHHH
T ss_pred cccCcc-ccCcEEEcCccHHHHHHHHHHhcCCC-CEEEECCCCcccHHHHHHHhCCeEEEeeccCC-CCCcCHHHHHHHH
Confidence 655422 44599999999999999999999999 99999999999999999999999999987543 3789999999988
Q ss_pred CC----Ccc-EEEEeCC-CCCCccCCCHHHHHHHHHHHH------HhCCEEEEeccccCCccCCCCCCccc-ccCC-CCC
Q 021547 182 DE----NTA-AIVIINP-CNPCGNVLTYQHLQKIAETAR------KLGILVIADEVYGHLAFGSTPYIPMG-VFGS-IVP 247 (311)
Q Consensus 182 ~~----~~~-~i~i~~p-~nptG~~~~~~~l~~l~~l~~------~~~~~li~D~ay~~~~~~~~~~~~~~-~~~~-~~~ 247 (311)
++ +++ ++++++| +||||.+++.+++++|+++|+ +||++||+||+|.++.+++....++. .... .++
T Consensus 171 ~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 250 (413)
T 3t18_A 171 DEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRN 250 (413)
T ss_dssp HHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTT
T ss_pred HHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCC
Confidence 75 677 7788899 999999999999999999999 89999999999999988775544432 2221 223
Q ss_pred --eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-----cccCCCchhHHHHHhhhhc
Q 021547 248 --VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-----VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 248 --~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+++|+||.|+++|+|+||++++... +++++.+..... ...+++.++|.++..+|++
T Consensus 251 ~~~i~~~S~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 315 (413)
T 3t18_A 251 LFVVVAFSMSKSHTAYGLRSGAAVGISSS-----KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERA 315 (413)
T ss_dssp EEEEEEEEHHHHTTCGGGCCEEEEEEESC-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSH
T ss_pred eeEEEEEecCccCCCcCcCcEEEEEecCC-----HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcC
Confidence 589999999999999999999983111 246777665432 1246889999999887753
No 32
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-37 Score=281.71 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=209.5
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
++|+|+.|++. +++++.+.+++.+.+. ....|++..|..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus 24 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~ 97 (376)
T 3ezs_A 24 RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN 97 (376)
T ss_dssp CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence 99999999854 5678999999988773 34579988899999999999999888888889999999999999999
Q ss_pred HHHHHhcC--CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 126 ILTVITRL--GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 126 ~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
++.+++++ | |+|+++.|+|.++...++..|.+++.+++....++ ++ .+++.+.++++++++++|+||||.+++.
T Consensus 98 ~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~ 173 (376)
T 3ezs_A 98 FPSFVLFDYQN-PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLVILNSPNNPTGRTLSL 173 (376)
T ss_dssp HHHHHTTTCSS-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEEEECSSCTTTCCCCCH
T ss_pred HHHHHcCCCCC-CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEEEEcCCCCCcCCCCCH
Confidence 99999999 9 99999999999999999999999999988654443 33 5556666688999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-----CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-----SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
+++++|+++|++||+++|+||+|..+.+++.....+...+ ..++++++.|+||.||++|+|+||++++.
T Consensus 174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 247 (376)
T 3ezs_A 174 EELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS------ 247 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH------
T ss_pred HHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH------
Confidence 9999999999999999999999999988763322222111 35688999999999999999999998742
Q ss_pred hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ..+++++++|+++.+.|++
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 248 --RLLEKYKAFRAYLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp --HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence 47788877644 3567899999999988864
No 33
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=8e-37 Score=278.87 Aligned_cols=253 Identities=14% Similarity=0.225 Sum_probs=219.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++++|+|+.|++ .+++++.+.+++.+.+.... ..|++. ..++++++++++.+.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADM----DFEVPQPIQTALKKRIEHPI-FGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSC----SSCCCHHHHHHHHHHHHSCC-CCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccC----CCCCCHHHHHHHHHHHhcCC-CCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 4689999999985 47789999999999987543 367664 6789999999999988888889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.+++...+ ++.+|++.|++.++++++++++++|+||||.++
T Consensus 95 ~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~ 173 (383)
T 3kax_A 95 LSTSIQAFTKEN-ESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVW 173 (383)
T ss_dssp HHHHHHHHCCTT-CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCC
T ss_pred HHHHHHHhCCCC-CEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCc
Confidence 999999999999 999999999999999999999999999876433 467899999999988999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+.+++++|+++|++||+++|+|++|..+.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 174 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~------ 247 (383)
T 3kax_A 174 KKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNE------ 247 (383)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH------
T ss_pred CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCH------
Confidence 9999999999999999999999999999988766666666654 36889999999999999999999998553
Q ss_pred hhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++.... ...++++++|+++.+.+++
T Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 248 -KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp -HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred -HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 37777766533 2347899999998888764
No 34
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-36 Score=277.35 Aligned_cols=253 Identities=19% Similarity=0.224 Sum_probs=219.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|++ .+++++.+.+++.+.+.... ..|.+. ..++++++++++.+.+|+++++++|++|+|++++
T Consensus 25 ~g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a 97 (391)
T 3dzz_A 25 LKEKELPMWIAEM----DFKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA 97 (391)
T ss_dssp CCTTCEECCSSCC----SSCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred cCCCceeccccCC----CCCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence 3678999999985 47789999999999987543 367664 6899999999999988888889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~ 200 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.++++ ...++.+|++.|++.++ ++++++++++|+||||.+
T Consensus 98 ~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~ 176 (391)
T 3dzz_A 98 ISAMVRQFTSPG-DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYA 176 (391)
T ss_dssp HHHHHHHHSCTT-CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBC
T ss_pred HHHHHHHhCCCC-CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcc
Confidence 999999999999 999999999999999999999999999875 34456799999999997 789999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
++.+++++|+++|++||+++|+|++|+.+.+.+..+.++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~----- 251 (391)
T 3dzz_A 177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP----- 251 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH-----
T ss_pred cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH-----
Confidence 99999999999999999999999999999888766666666653 45789999999999999999999998643
Q ss_pred hhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ..+++++++|+++.+.|++
T Consensus 252 --~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 252 --DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp --HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 47777776632 2357889999988877753
No 35
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=3.3e-37 Score=284.35 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=214.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~ 121 (311)
.+.++|+|+.|.+. ++.++.+.+++.+.+.......|++..|..++|+++++++.+.+|.++++ ++|++|+|+++
T Consensus 45 ~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~ 120 (404)
T 2o1b_A 45 GPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN 120 (404)
T ss_dssp CSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHH
T ss_pred CCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHH
Confidence 35679999999864 45688999999988754323468887899999999999998878877776 79999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++.+++.+++++| |+|+++.|+|.++...++..|.+++.++... +++.+|++.|++.++++++++++++|+||||.++
T Consensus 121 al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 198 (404)
T 2o1b_A 121 GLVAVPTCVINPG-DYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTA 198 (404)
T ss_dssp HHHHHHHHHCCTT-CEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred HHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccC
Confidence 9999999999999 9999999999999999999999999998754 5667899999988877889999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+.+++++|+++|+++|++||+||+|..+.+++ .+.++..++ ..++++++.|+||.|+++|+|+||++++.
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------- 269 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK-------- 269 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--------
Confidence 99999999999999999999999999988866 333444443 23578999999999999999999998742
Q ss_pred hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...++++++|+++.++|++
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 270 DMIQALKKYQTHTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 47777776543 3467899999999988764
No 36
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=9.1e-36 Score=271.15 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=216.6
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
-..+.++++.+...+. ++ .++++|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|+++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~-~~-~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 9 FESFEVMDILALAQKL-ES-EGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CCCCTTHHHHHHHHHH-HH-TTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHH-Hh-cCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence 4556677766543322 21 36789999999864 455799999999988754 34798888999999999999998
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+|+.+++++|++|+|+++++.+++.+++++| |+|+++.|+|..+...++..|.+++.++ +|+++|++.++
T Consensus 82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~ 152 (370)
T 2z61_A 82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDG-DEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALS 152 (370)
T ss_dssp HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCC
T ss_pred HhCCCCChhhEEECCChHHHHHHHHHHhcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhcc
Confidence 88888899999999999999999999999999 9999999999999999999999998886 58999999998
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~ 261 (311)
++++++++++|+||||.+++.+ |.++|+++|+++|+||+|..+.+++. +.++..++ ..++++++.|+||.++++
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~~~~ 227 (370)
T 2z61_A 153 DKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLYAMT 227 (370)
T ss_dssp SSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred cCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhccCCc
Confidence 8899999999999999999955 99999999999999999999888663 33444443 345789999999999999
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
|+|+||+++++ ++++.++.... ..+++++++|+++.++|+
T Consensus 228 G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 268 (370)
T 2z61_A 228 GWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFE 268 (370)
T ss_dssp GGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGS
T ss_pred cceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 99999999854 47777776643 345789999999988885
No 37
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-37 Score=286.53 Aligned_cols=252 Identities=19% Similarity=0.263 Sum_probs=213.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~ 120 (311)
++++|+|+.|.|.. ...+++.+.+++.+.+.... ...|.+..|..++|+++++++.+.+|++ +++++|++|+|++
T Consensus 42 ~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~ 119 (425)
T 1vp4_A 42 DKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ 119 (425)
T ss_dssp STTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred CCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence 56899999998652 23467899999998886431 3478888899999999999998766776 7889999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--------CccEE-EEe
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--------NTAAI-VII 191 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~i-~i~ 191 (311)
+++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...+ ++|++.|++.+++ +++++ +++
T Consensus 120 ~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~ 195 (425)
T 1vp4_A 120 QALDLIGKLFLDDE-SYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVS 195 (425)
T ss_dssp HHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEEC
T ss_pred HHHHHHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECC
Confidence 99999999999999 99999999999999999999999999987542 4899999998765 67887 478
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+|+||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++..++..+++|++.|+||.|+ +|+|+||++++
T Consensus 196 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~ 274 (425)
T 1vp4_A 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGS 274 (425)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECC
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeC
Confidence 99999999999999999999999999999999999999887765555655555568899999999998 99999999985
Q ss_pred CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
. ++++.+..... .+.++|+++|+++.++|++
T Consensus 275 ~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 275 K--------EFIRKIVQAKQSADLCSPAITHRLAARYLER 306 (425)
T ss_dssp H--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhc
Confidence 3 47777766533 3456799999999998864
No 38
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.3e-36 Score=279.35 Aligned_cols=251 Identities=18% Similarity=0.241 Sum_probs=213.9
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+++|+|+.|++. +++++.+.+++.+.+... ...|++. ..++|+++++++++.+|+++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 589999999853 567899999999988643 3467764 899999999999887787788899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~ 202 (311)
+++.+++++| |+|+++.|+|.++...++..|.+++.++....+ ++.+|++.|++.++ ++++++++++|+||||.+++
T Consensus 104 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (399)
T 1c7n_A 104 NAVREFTKPG-DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK 182 (399)
T ss_dssp HHHHHHCCTT-CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHhcCCC-CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence 9999999999 999999999999999999999999999875332 46789999999887 68899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
.+++++|+++|++||+++|+||+|..+.+++..+.++..++. .++++++.|+||.++++|+|+||++++++
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~------- 255 (399)
T 1c7n_A 183 KDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP------- 255 (399)
T ss_dssp HHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------
Confidence 999999999999999999999999999887765556665543 45789999999999999999999998643
Q ss_pred hHHHHHhhhhc-cc-cCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLG-VR-SGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~-~~-~~~~~~~q~~~~~~l~~ 310 (311)
+++++++.... .+ .++++++|+++.++|++
T Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 256 DIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 36777766543 22 36799999998887753
No 39
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=1.2e-35 Score=277.26 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=208.9
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
.+++++|+|+.|++. ++.++.+.+++.+.+.. .....|.+..|..++|+++++++. +|+++.+++|++|+
T Consensus 66 ~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~ 139 (449)
T 3qgu_A 66 NPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISD 139 (449)
T ss_dssp CTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEES
T ss_pred CCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEcc
Confidence 457899999999854 67899999999998873 344579888899999999999998 78888899999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE----------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE----------VRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
|+++++..+ ..++++| |+|+++.|+|.++...++..|.+ ++.+++...+++..+++++ +++++
T Consensus 140 G~~~al~~~-~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 212 (449)
T 3qgu_A 140 GSKCDIARI-QMMFGSK-PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDI 212 (449)
T ss_dssp CHHHHHHHH-HHHHCSS-SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSE
T ss_pred CHHHHHHHH-HHHhCCC-CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCE
Confidence 999999998 8888999 99999999999999999999998 9999886555555554432 57899
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG 266 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G 266 (311)
+++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..++. .+++|++.|+||.|+++|+|+|
T Consensus 213 v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 292 (449)
T 3qgu_A 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLG 292 (449)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCE
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeE
Confidence 999999999999999999999999999999999999999999887755556666654 4578999999999999999999
Q ss_pred EEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 267 WLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 267 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
|++++..........+...+.... ....++++++|+++.+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 293 WTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp EEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred EEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence 999865321100011222343332 23447899999999888764
No 40
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=4.6e-37 Score=284.29 Aligned_cols=290 Identities=14% Similarity=0.105 Sum_probs=221.3
Q ss_pred ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547 9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87 (311)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~ 87 (311)
|...++++... ..++.++.+.....+...+.++.++|+|+.|.| +..+.+++++.+.+++.+..... ...|.+..
T Consensus 5 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~ 80 (418)
T 3rq1_A 5 TSVAAKHAKGK---KLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIA 80 (418)
T ss_dssp CCCSCTTTTTC---CCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTT
T ss_pred hhhhHhhcCCC---CCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCC
Confidence 33334444444 556667777665544433335678999999986 11235778899988887644322 23799888
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 167 (311)
|.+++|+++++++....+.. ..++|++|+|+++++..++.+++++| |+|+++.|+|.+|...++..|.+++.+++.++
T Consensus 81 g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~ 158 (418)
T 3rq1_A 81 GIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPG-DEVLTADWYWGAYRVICSDTGRTLVTYSLFDE 158 (418)
T ss_dssp CCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTT-CEEEEESSCCTHHHHHHHHTTCEEEEECSBCT
T ss_pred ChHHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCC-CEEEECCCCchhHHHHHHHcCCEEEEEeeeCC
Confidence 99999999999997755422 13389999999999999999999999 99999999999999999999999999987544
Q ss_pred CCcccCHHHHHhhcCC----Ccc-EEEEeCC-CCCCccCCCHHHHHHHHHHHH------HhCCEEEEeccccCCccCCCC
Q 021547 168 RGWEVDLEAVEALADE----NTA-AIVIINP-CNPCGNVLTYQHLQKIAETAR------KLGILVIADEVYGHLAFGSTP 235 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~~----~~~-~i~i~~p-~nptG~~~~~~~l~~l~~l~~------~~~~~li~D~ay~~~~~~~~~ 235 (311)
+ +.+|++.|++.+++ +++ ++++++| +||||.+++.+++++|+++|+ +||++||+||+|.++.+++..
T Consensus 159 ~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~ 237 (418)
T 3rq1_A 159 H-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE 237 (418)
T ss_dssp T-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred C-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence 3 78999999998874 566 7888899 999999999999999999999 899999999999998876543
Q ss_pred CCccc-ccCC-CCC--eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-----cccCCCchhHHHHHh
Q 021547 236 YIPMG-VFGS-IVP--VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-----VRSGPSTLIQVCEMF 306 (311)
Q Consensus 236 ~~~~~-~~~~-~~~--~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~ 306 (311)
..++. .... .++ +|+++|+||.|+++|+|+||+++.... +++++.+..... ...+++.++|.++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 312 (418)
T 3rq1_A 238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDD-----EEIADEFFEVNKSTSRATWSNICRPAMRTMAN 312 (418)
T ss_dssp HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESS-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCC-----HHHHHHHHHHHHHHHhhccCCCchHHHHHHHH
Confidence 22221 2221 223 689999999999999999999973111 246776665432 124688999999988
Q ss_pred hhhc
Q 021547 307 LLVN 310 (311)
Q Consensus 307 ~l~~ 310 (311)
+|++
T Consensus 313 ~l~~ 316 (418)
T 3rq1_A 313 IVAD 316 (418)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 8764
No 41
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=5.5e-36 Score=274.02 Aligned_cols=252 Identities=18% Similarity=0.289 Sum_probs=218.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|++ .+++++.+.+++.+.+.... ..|.+ +..++++++++++.+.+|..+++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 102 (391)
T 4dq6_A 30 GTNDLLPMWVADM----DFKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPA 102 (391)
T ss_dssp SCSCSEECCSSSC----SSCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCceeccccCC----CCCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHH
Confidence 3689999999985 36789999999999987533 35655 66999999999999988888889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc--CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL--PERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.+++. ...++.+|++++++.+++ ++++++++|+||||.+
T Consensus 103 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~ 180 (391)
T 4dq6_A 103 ISLLINELTKAN-DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRV 180 (391)
T ss_dssp HHHHHHHHSCTT-CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBC
T ss_pred HHHHHHHhCCCC-CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcC
Confidence 999999999999 999999999999999999999999999986 345678999999999988 9999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
++.+++++|+++|++||+++|+|++|..+.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~----- 255 (391)
T 4dq6_A 181 WTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE----- 255 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-----
T ss_pred cCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-----
Confidence 99999999999999999999999999999988776666666654 36889999999999999999999998653
Q ss_pred hhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.+..... ...++++++|+++...+++
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 256 --KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp --HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence 36777766532 2347888999988877753
No 42
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.9e-36 Score=275.38 Aligned_cols=273 Identities=25% Similarity=0.361 Sum_probs=221.1
Q ss_pred hHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 021547 14 KQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR 93 (311)
Q Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr 93 (311)
+.+.+. ...+.++++.....+ +.+ .++++|+|+.|.+. ++.++.+.+++ +.+... ...|++..|..++|
T Consensus 17 ~~~~~~---~~~~~~~~~~~~~~~-~~~-~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~ 85 (409)
T 2gb3_A 17 SDRVLL---TEESPIRKLVPFAEM-AKK-RGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELR 85 (409)
T ss_dssp CHHHHS---CCCCTTGGGHHHHHH-HHH-TTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHH
T ss_pred HHHhhc---CCccHHHHHHHHHHH-HHh-cCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHH
Confidence 444444 444445555443222 111 36889999999864 45678899999 887543 34788888999999
Q ss_pred HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547 94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD 173 (311)
Q Consensus 94 ~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 173 (311)
+++++++...+|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++....+++.+
T Consensus 86 ~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~- 163 (409)
T 2gb3_A 86 EAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPG-DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI- 163 (409)
T ss_dssp HHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence 99999999888888888999999999999999999999999 9999999999999999999999999998764345555
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc-cccCCCCCeEEEe
Q 021547 174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM-GVFGSIVPVITLG 252 (311)
Q Consensus 174 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~-~~~~~~~~~i~i~ 252 (311)
++.|++.++++++++++++|+||||.+++.+++++|+++|+++|++||+|++|+.+.+++. +.++ ..+ .++++++.
T Consensus 164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~--~~~~i~~~ 240 (409)
T 2gb3_A 164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASALSIE--SDKVVVID 240 (409)
T ss_dssp CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCGGGSC--CTTEEEEE
T ss_pred HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCccccC--CCCEEEEe
Confidence 8899999988899999999999999999999999999999999999999999999887663 3332 211 34689999
Q ss_pred cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||.++++|+|+||++++++ ++++.++.... .. ++++++|+++.++|+.
T Consensus 241 s~sK~~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~ 291 (409)
T 2gb3_A 241 SVSKKFSACGARVGCLITRNE-------ELISHAMKLAQGRL-APPLLEQIGSVGLLNL 291 (409)
T ss_dssp ESTTTTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC
T ss_pred cchhccCCccceEEEEEECcH-------HHHHHHHHHHhccC-CCCHHHHHHHHHHHhc
Confidence 999999999999999998642 36777766533 23 7899999999888853
No 43
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1e-35 Score=272.68 Aligned_cols=250 Identities=19% Similarity=0.269 Sum_probs=209.2
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH-HHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL-ARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+++|+|+.|++. +++++.+.+++.+.+... ...|++. ..+ +|+++++++++.+|+.+++++|++|+|++++
T Consensus 27 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~a 99 (390)
T 1d2f_A 27 TADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 99 (390)
T ss_dssp ---CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHH
T ss_pred CCCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHH
Confidence 3579999999853 568899999999988643 3468764 678 9999999999888888889999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcCC-CccEEEEeCCCCCCccC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALADE-NTAAIVIINPCNPCGNV 200 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~ 200 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.++...++ ++.+|++.|++.+++ +++++++++|+||||.+
T Consensus 100 l~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~ 178 (390)
T 1d2f_A 100 VSELIRQWSETG-EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKV 178 (390)
T ss_dssp HHHHHHHSSCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHhcCCC-CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcC
Confidence 999999999999 999999999999999999999999999876543 467999999999876 78999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
++.+++++|+++|+++|+++|+||+|..+.++|..+.++..++....-+ +.|+||.|+++|+|+||++++++
T Consensus 179 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~------- 250 (390)
T 1d2f_A 179 WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS------- 250 (390)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------
Confidence 9999999999999999999999999999988776666665554321013 99999999999999999998643
Q ss_pred hHHHHHhhhhc--cc-cCCCchhHHHHHhhhh
Q 021547 281 GIVGSIKACLG--VR-SGPSTLIQVCEMFLLV 309 (311)
Q Consensus 281 ~~~~~~~~~~~--~~-~~~~~~~q~~~~~~l~ 309 (311)
++++.+..... .. +++++++|+++.+.|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 282 (390)
T 1d2f_A 251 SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQ 282 (390)
T ss_dssp HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHh
Confidence 36777766532 33 3788999988887775
No 44
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3.7e-36 Score=275.93 Aligned_cols=263 Identities=19% Similarity=0.174 Sum_probs=206.1
Q ss_pred CCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--eCChH
Q 021547 44 PRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~--t~g~~ 120 (311)
++++|+|+.|.+. .....++++.+.+++.+.+......+|.+..|..++|+++++++....+..+++++|++ |+|++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~ 104 (396)
T 2q7w_A 25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT 104 (396)
T ss_dssp ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence 5789999999742 11234677999999998876544558988889999999999999764443346789998 99999
Q ss_pred HHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCC
Q 021547 121 EAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCN 195 (311)
Q Consensus 121 ~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~n 195 (311)
+++++++.++. .+| |+|+++.|+|.++...++..|.+++.++....+++.+|++.+++.+++ +++++++++|+|
T Consensus 105 ~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n 183 (396)
T 2q7w_A 105 GALRVAADFLAKNTSV-KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN 183 (396)
T ss_dssp HHHHHHHHHHHHHSCC-CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred hhHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 99999998774 589 999999999999999999999999999876546688999999998864 367788899999
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe--e
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT--N 271 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~--~ 271 (311)
|||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..++. .+++++++|+||.|+++|+|+||+++ +
T Consensus 184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~ 263 (396)
T 2q7w_A 184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA 263 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence 99999999999999999999999999999999988753 12223332322 34789999999999999999999997 3
Q ss_pred CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 272 DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++ .. .++++.+.... ....++++++|+++.++|++
T Consensus 264 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (396)
T 2q7w_A 264 DSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSN 300 (396)
T ss_dssp SHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred CHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcC
Confidence 321 00 12555555432 33345699999999988764
No 45
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.9e-35 Score=270.16 Aligned_cols=242 Identities=26% Similarity=0.371 Sum_probs=205.7
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+++|+|+.|.|. ++.++.+.+++.+.+.. ...|.+..|..++|+++++++ ++++++|++|+|+++++.
T Consensus 25 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a~~ 92 (381)
T 1v2d_A 25 LGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF------AVEPESVVVTSGATEALY 92 (381)
T ss_dssp HTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH------TSCGGGEEEESSHHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc------CCChhhEEEcCChHHHHH
Confidence 468999999864 56789999999998865 447988789999999999997 346778999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
+++.+++++| |+|+++.|+|..+...++..|.+++.++... ..++.+|+++|++.++++++++++++|+||||.+++.
T Consensus 93 ~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~ 171 (381)
T 1v2d_A 93 VLLQSLVGPG-DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGE 171 (381)
T ss_dssp HHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCH
Confidence 9999999999 9999999999999999999999999998751 1347899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++++|+++|++||+++|+|++|..+.+ |....++..+ ..++++++.|+||.|+++|+|+||++++. +++
T Consensus 172 ~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 241 (381)
T 1v2d_A 172 RELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPK--------EFM 241 (381)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCT--------TTH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCH--------HHH
Confidence 9999999999999999999999999877 4444444433 34578999999999999999999999853 256
Q ss_pred HHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 284 GSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 284 ~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+.++.... ..+++++++|+++.++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~a~~~~l~ 268 (381)
T 1v2d_A 242 PRLAGMRQWTSFSAPTPLQAGVAEALK 268 (381)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence 66655432 345778999999888875
No 46
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.4e-36 Score=278.71 Aligned_cols=276 Identities=16% Similarity=0.126 Sum_probs=206.9
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
..++.++.+++.+.+. ..+++|+|+.|+|. .++.++.+.+++.++. .....+|.+..|..++|+++++++..
T Consensus 23 ~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~ia~~~~~ 94 (409)
T 4eu1_A 23 GKPDPILGLGQDFRMD----PAKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEAQKLCFG 94 (409)
T ss_dssp ----CHHHHHHHHHHC----CCSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred CCCChHHHHHHHHhhC----CCcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHHHHHHcC
Confidence 4556677777654332 46789999999972 2344455666666553 33455899889999999999999954
Q ss_pred cCCCCCCCCCEE--EeCChHHHHHHHHH---HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 103 DLPYKLSADDIY--ITLGCMEAVEIILT---VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 103 ~~g~~~~~~~v~--~t~g~~~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
..+..+++++|. .|.|+++++.++.. +++++| |+|+++.|+|.++...++..|.+++.+++...+++.+|++.+
T Consensus 95 ~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 173 (409)
T 4eu1_A 95 PTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANC-NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGM 173 (409)
T ss_dssp SSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSC-CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHH
T ss_pred CCchhhccCceeeeecccchHHHHHHHHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHH
Confidence 322222367884 49999999987644 455789 999999999999999999999999999986567789999999
Q ss_pred HhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc-CCCCCeEEE
Q 021547 178 EALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF-GSIVPVITL 251 (311)
Q Consensus 178 ~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~-~~~~~~i~i 251 (311)
++.++ ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ...++..+ +..+++|++
T Consensus 174 ~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 253 (409)
T 4eu1_A 174 LECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVA 253 (409)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEE
T ss_pred HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEE
Confidence 99885 3456667799999999999999999999999999999999999999888652 11222222 345578999
Q ss_pred ecCcccCCCCcceeeEE--EeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 252 GSISKRWIVPGWRFGWL--ATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 252 ~s~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+||.|+++|+|+||+ ++++++ . .+.+++.++... ....++++++|.+++.+|++
T Consensus 254 ~S~SK~~g~~G~riG~~~~v~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 4eu1_A 254 QSFSKNFGLYGHRCGALHISTASAE-E--AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312 (409)
T ss_dssp EECTTTSSCGGGCCEEEEEECSSHH-H--HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred ecCcccccCccCCceEEEEEeCCHH-H--HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence 99999999999999997 655421 0 011556666553 33567789999999988764
No 47
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=7.3e-36 Score=277.11 Aligned_cols=252 Identities=19% Similarity=0.327 Sum_probs=205.9
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCCC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----------SMFNCYAPMFGLPLARRAVAEYLNRDLPYK--LSADD 112 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~--~~~~~ 112 (311)
..+|+|+.+... ++ ++.+.+++.+.... .....|+++.|..++|+++++++++.+|.. +++++
T Consensus 36 ~~~i~l~~~~~~----~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 36 NGVIQMGLAENQ----LC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp TSBEECSSCCCC----SS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred Cceeeeccccch----hh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 578999987532 23 45788887753210 013478888899999999999999888865 77899
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH-HHcCcEEEEeeccCCCCcccCHHHHHhhcCC------Cc
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA-KRNHIEVRHFDLLPERGWEVDLEAVEALADE------NT 185 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~ 185 (311)
|++|+|+++++.+++.+++++| |+|+++.|+|..+...+ ...|.+++.++...++++.+|++.+++.+++ ++
T Consensus 111 i~~~~G~~~ai~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 189 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLADPG-DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV 189 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHCCTT-CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEEccChHHHHHHHHHHhCCCC-CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCce
Confidence 9999999999999999999999 99999999999987644 4689999999875555678999999988753 68
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--------CCCeEEEecCccc
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--------IVPVITLGSISKR 257 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--------~~~~i~i~s~sK~ 257 (311)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.|++..+.++..+.. .++++++.|+||.
T Consensus 190 ~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~ 269 (428)
T 1iay_A 190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD 269 (428)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred EEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhh
Confidence 89999999999999999999999999999999999999999998886654444433332 3578999999999
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+++|+|+||++++++ ++++.++.... .+++|+++|+++.++|++
T Consensus 270 ~g~~Glr~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~ 314 (428)
T 1iay_A 270 MGLPGFRVGIIYSFND-------DVVNCARKMSS-FGLVSTQTQYFLAAMLSD 314 (428)
T ss_dssp SSCGGGCEEEEEESCH-------HHHHHHHHHHT-TSCCCHHHHHHHHHHTTC
T ss_pred cCCCCceEEEEEeCCH-------HHHHHHHHHHh-cccCCHHHHHHHHHHhcC
Confidence 9999999999998543 37777776544 356899999999998865
No 48
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.3e-35 Score=273.99 Aligned_cols=281 Identities=16% Similarity=0.152 Sum_probs=217.8
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
...+.+++++....+ ..++++|+|+.|.| +.....++++.+.+++.+.+.. ....+|.+..|..++|+++++++
T Consensus 12 ~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~ 87 (412)
T 1ajs_A 12 AQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLA 87 (412)
T ss_dssp CCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHH
Confidence 445677777765432 24688999999986 3222245679999999988732 24557988889999999999999
Q ss_pred hhcCCCCCCCCCEEE--eCChHHHHHHHHH--HHhcCCC----CEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcc
Q 021547 101 NRDLPYKLSADDIYI--TLGCMEAVEIILT--VITRLGA----ANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWE 171 (311)
Q Consensus 101 ~~~~g~~~~~~~v~~--t~g~~~a~~~~~~--~l~~~g~----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~ 171 (311)
...+|..+++++|++ |+|+++++++++. .++.+|. |+|+++.|+|.++...++..|.+ ++.++...++++.
T Consensus 88 ~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (412)
T 1ajs_A 88 LGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 167 (412)
T ss_dssp HCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTE
T ss_pred hcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCc
Confidence 766666567889999 9999999999864 4445553 78999999999999999999999 9999875556788
Q ss_pred cCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccC-CC
Q 021547 172 VDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFG-SI 245 (311)
Q Consensus 172 ~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~-~~ 245 (311)
+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ ..+.++..+. ..
T Consensus 168 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 247 (412)
T 1ajs_A 168 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEG 247 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccC
Confidence 999999998764 66778889999999999999999999999999999999999999988765 1222333232 24
Q ss_pred CCeEEEecCcccCCCCcceeeEEEee--CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547 246 VPVITLGSISKRWIVPGWRFGWLATN--DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G~r~G~i~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++|++.|+||.|+++|+|+||+++. +++ .. ..+++.+.... ....++++++|+++.++|++
T Consensus 248 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1ajs_A 248 FELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSD 312 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred CcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcC
Confidence 57899999999999999999999983 221 00 11455555532 33345699999999988864
No 49
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=1.7e-35 Score=274.15 Aligned_cols=251 Identities=19% Similarity=0.249 Sum_probs=218.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
++++|+|+.|++ .++++|.+.+++.+.+.... ..|... ..++++++++++.+.+|+++.+++|++|+|+++|+
T Consensus 60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADM----DFLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 678999999984 47789999999999987543 367653 38999999999999889888899999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~ 201 (311)
+.++.++.++| |+|+++.|+|.++...++..|.+++.+++. ...++.+|++.|++.++ ++++++++++|+||||.++
T Consensus 133 ~~a~~~~~~~g-d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~ 211 (421)
T 3l8a_A 133 SIALQAFSEKG-DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVW 211 (421)
T ss_dssp HHHHHHHSCTE-EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHhcCCC-CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcC
Confidence 99999999999 999999999999999999999999999986 45567899999999987 7899999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+.+++++|.++|++||+++|+||+|..+.++|..+.++..+.. .++++++.|+||.|+++|+|+||++++++
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~------ 285 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE------ 285 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH------
Confidence 9999999999999999999999999999998877777766654 46789999999999999999999998753
Q ss_pred hhHHHHHhhhh-c-cccCCCchhHHHHHhhhh
Q 021547 280 SGIVGSIKACL-G-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 280 ~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~ 309 (311)
++++.+.... . ...++++++|+++.+.++
T Consensus 286 -~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~ 316 (421)
T 3l8a_A 286 -SLRRKFQYRQLANNQHEVPTVGMIATQAAFQ 316 (421)
T ss_dssp -HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcccCCCCHHHHHHHHHHHh
Confidence 3777776653 2 234789999999888775
No 50
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=5e-36 Score=276.79 Aligned_cols=278 Identities=15% Similarity=0.113 Sum_probs=213.6
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
.+.++.+...+.+. .++++|+|+.|.| +..+..++++.+.+++.+ .+..+...+|.+..|..++|+++++++..
T Consensus 13 ~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 88 (412)
T 1yaa_A 13 PDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFG 88 (412)
T ss_dssp CCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhc
Confidence 45566666543222 4678999999986 322334678999999999 87644455798888999999999999977
Q ss_pred cCCCCCCCCCEEE--eCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547 103 DLPYKLSADDIYI--TLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 103 ~~g~~~~~~~v~~--t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 178 (311)
.+|+.+++++|++ |+|+++++.+++ ..++.+| |+|+++.|+|.++...++..|.+++.++....+++.+|++.++
T Consensus 89 ~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 167 (412)
T 1yaa_A 89 TQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFL 167 (412)
T ss_dssp TTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHH
T ss_pred CCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCC-CEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHH
Confidence 6666667889999 999999999884 3444689 9999999999999999999999999998733346789999999
Q ss_pred hhcCCC---ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccC-CCC---CeE
Q 021547 179 ALADEN---TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFG-SIV---PVI 249 (311)
Q Consensus 179 ~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~-~~~---~~i 249 (311)
+.++++ +.++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++ ....++..+. ... ++|
T Consensus 168 ~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 247 (412)
T 1yaa_A 168 NAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVF 247 (412)
T ss_dssp HHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEE
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceE
Confidence 987643 3445559999999999999999999999999999999999999988764 1222232221 123 789
Q ss_pred EEecCcccCCCCcceeeEEE--e-e---CCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 250 TLGSISKRWIVPGWRFGWLA--T-N---DPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~--~-~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++|+||.|+.+|+|+||++ + + +++ . ...+++++... .....++++++|+++.++|++
T Consensus 248 ~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1yaa_A 248 VCQSFAKNAGMYGERVGCFHLALTKQAQNKT-I--KPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLET 312 (412)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECCSCTTHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred EEeccCCCCCCcCCcceEEEEEecCCCCCHH-H--HHHHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Confidence 99999999998899999998 5 1 210 0 01266777764 333456689999999988864
No 51
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.8e-35 Score=271.39 Aligned_cols=269 Identities=20% Similarity=0.246 Sum_probs=207.8
Q ss_pred hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547 27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNR 102 (311)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~ 102 (311)
.++++.++......+.+++++|+|+.|++. ++.++.+.+++.+.+.. .....|.+..|..++|+++++++.+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~ 113 (432)
T 3ei9_A 38 LFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG 113 (432)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 344444444444444457799999999854 68899999999998863 2344788888999999999999974
Q ss_pred cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCc------------EEEEeeccCCCCc
Q 021547 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI------------EVRHFDLLPERGW 170 (311)
Q Consensus 103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~~ 170 (311)
++++.+++|++|+|+++++.++ ..++++| |.|+++.|+|.++...++..|. +++.+++....++
T Consensus 114 --~~~~~~~~i~~t~G~~~al~~l-~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (432)
T 3ei9_A 114 --GLGIGDDDVFVSDGAKCDISRL-QVMFGSN-VTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189 (432)
T ss_dssp --TTTCCGGGEEEESCHHHHHHHH-HHHHCTT-CCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTT
T ss_pred --cCCCCcceEEECCChHHHHHHH-HHHcCCC-CEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCC
Confidence 6667889999999999999975 7777899 9999999999999998888884 5777776544444
Q ss_pred ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeE
Q 021547 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVI 249 (311)
Q Consensus 171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 249 (311)
..+++. .++++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++.+ .++..+.. .+++|
T Consensus 190 ~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~i 263 (432)
T 3ei9_A 190 FPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFEIPGAEEVAM 263 (432)
T ss_dssp SCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGGSTTGGGTEE
T ss_pred cCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhhcCCCCCeEE
Confidence 455432 357899999999999999999999999999999999999999999998876543 33434432 45789
Q ss_pred EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++.|+||.|+++|+|+||+++++.........+++.+..... ...++++++|.++.+++.
T Consensus 264 ~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (432)
T 3ei9_A 264 ETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLT 324 (432)
T ss_dssp EEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred EEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 999999999999999999998654200001113566655532 345688999998887764
No 52
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=4.5e-36 Score=275.79 Aligned_cols=271 Identities=20% Similarity=0.263 Sum_probs=219.3
Q ss_pred ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 021547 9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPM 86 (311)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~ 86 (311)
|...++++.+. -..+.++.++... ..+++|+|+.|.|.. ...+++.+.+++.+.+... ....|.+.
T Consensus 6 ~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~ 73 (397)
T 2zyj_A 6 WSEAFGKGAGR---IQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPT 73 (397)
T ss_dssp HHHHSCGGGGG---CCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCT
T ss_pred HHHHhhhhhcc---cCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCC
Confidence 44445655554 3445567666532 246799999997652 2346789999998887642 13478887
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 166 (311)
.|..++|++++++++ +++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...
T Consensus 74 ~~~~~l~~~la~~~g------~~~~~v~~~~g~~~al~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 146 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEG-SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE 146 (397)
T ss_dssp TCCHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTCCEEEEEEEET
T ss_pred CCCHHHHHHHHHHhC------CChhhEEEeccHHHHHHHHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCEEEecCcCC
Confidence 899999999999992 567899999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCcccCHHHHHhhcCC-CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 167 ERGWEVDLEAVEALADE-NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~-~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
+ ++|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..++.
T Consensus 147 --~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (397)
T 2zyj_A 147 --E-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAR 223 (397)
T ss_dssp --T-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHH
T ss_pred --C-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCc
Confidence 2 4899999998875 78887 56899999999999999999999999999999999999999887665555555544
Q ss_pred C---CCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 245 I---VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 245 ~---~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+ ++++++.|+||.|+ +|+|+||++++. ++++.++.... ...++++++|+++.++|++
T Consensus 224 ~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 284 (397)
T 2zyj_A 224 EAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKE 284 (397)
T ss_dssp HHTCCCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT
T ss_pred ccCCCeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence 4 67899999999998 999999999852 47777766533 3456799999999988864
No 53
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.3e-35 Score=277.36 Aligned_cols=277 Identities=16% Similarity=0.159 Sum_probs=213.9
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCcHHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSV--RSSMFNCYAPMFGLPLARRAVAEY 99 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~--~~~~~~~Y~~~~g~~~lr~~ia~~ 99 (311)
...+.|+.+...+.+ ...+.+|+|+.|.| +.....+..+.+.+++.+.. .......|.+..|.+++|++++++
T Consensus 31 ~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 106 (448)
T 3meb_A 31 SPPDAILNLTVLYNA----DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFL 106 (448)
T ss_dssp CCCCTTHHHHHHHHH----CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHh----CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHH
Confidence 344556776655322 24566899999987 54334456788888877765 223455899989999999999999
Q ss_pred HhhcCCCC---CCCCCEEE--eCChHHHHHH--HHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEeeccCCC
Q 021547 100 LNRDLPYK---LSADDIYI--TLGCMEAVEI--ILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLLPER 168 (311)
Q Consensus 100 l~~~~g~~---~~~~~v~~--t~g~~~a~~~--~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~ 168 (311)
+. |.. +.+++|++ |+|+++++.+ .+.+++.+| |+|+++.|+|.++...++ ..|.+++.+++.+.+
T Consensus 107 l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~ 182 (448)
T 3meb_A 107 MF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPK-AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKD 182 (448)
T ss_dssp HH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTT
T ss_pred hc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCC-CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccc
Confidence 94 322 22689999 9999999987 556677899 999999999999999999 999999999875444
Q ss_pred -CcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc
Q 021547 169 -GWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF 242 (311)
Q Consensus 169 -~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~ 242 (311)
++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ....+..+
T Consensus 183 ~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 262 (448)
T 3meb_A 183 GELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMF 262 (448)
T ss_dssp SCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHH
T ss_pred cCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHH
Confidence 68899999999886 3577888899999999999999999999999999999999999999887641 11222222
Q ss_pred -CCCCCeEEEecCcccCCCCcceeeEE--Ee--------eCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 243 -GSIVPVITLGSISKRWIVPGWRFGWL--AT--------NDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 243 -~~~~~~i~i~s~sK~~~~~G~r~G~i--~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
....++|++.|+||.|+++|+|+||+ ++ ++++ . .+.+++.+... .....+++.++|.+++.+|++
T Consensus 263 ~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 263 VDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred hhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence 23457899999999999999999998 55 3321 0 01366666654 344567889999999988764
No 54
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-36 Score=281.53 Aligned_cols=254 Identities=17% Similarity=0.222 Sum_probs=209.0
Q ss_pred CCCeeecCCCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC---EEEeC
Q 021547 44 PRPVIPLGHGDP-AAFPCFRTAAVA--EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD---IYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p-~~~~~~~~~~~~--~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~---v~~t~ 117 (311)
.+++|+|+.|.| . ++.++.+ .+++.+.+......+|++..|..++|+++++++++.+ +++++++ |++|+
T Consensus 46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 357899999986 4 3345555 5665555433234589988899999999999998764 6777888 99999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCC
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINP 193 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p 193 (311)
|+++++.+++.+++++| |+|+++.|+|.++...++. .|.+++.++....+ +.+|+++|++.+++ +++++++++|
T Consensus 121 g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p 198 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQD-DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYP 198 (430)
T ss_dssp HHHHHHHHHHHHHCCTT-CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSS
T ss_pred CchHHHHHHHHHHhCCC-CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCC
Confidence 99999999999999999 9999999999999999999 99999999875533 77999999998876 7899999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHH-----hCCEEEEeccccCCccCCCCCCccc-ccCC-CCC---eEEEecCcccCCCCcc
Q 021547 194 CNPCGNVLTYQHLQKIAETARK-----LGILVIADEVYGHLAFGSTPYIPMG-VFGS-IVP---VITLGSISKRWIVPGW 263 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~-----~~~~li~D~ay~~~~~~~~~~~~~~-~~~~-~~~---~i~i~s~sK~~~~~G~ 263 (311)
+||||.+++.+++++|+++|++ +|+++|+||+|..+.+++.++.++. .++. .++ +|+++|+||.|+++|+
T Consensus 199 ~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 278 (430)
T 2x5f_A 199 NNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF 278 (430)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG
T ss_pred CCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCC
Confidence 9999999999999999999999 9999999999999988765444543 3432 456 8999999999999999
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhhhc-----cccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKACLG-----VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~ 309 (311)
|+||+++.++. +++++.+..... .+.++|+++|+++.++|+
T Consensus 279 riG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 279 RVGFMTFGTSD-----QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp CCEEEEEBCCC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred CeEEEEEecCC-----HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 99999982110 246777665532 356789999999999887
No 55
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.6e-35 Score=266.38 Aligned_cols=243 Identities=18% Similarity=0.252 Sum_probs=209.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
..++++|+|+.|.+. +++++.+.+++.+.+.. ...|+. .+..++|++++++++ +++++|++|+|+++
T Consensus 13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~~------~~~~~i~~~~g~~~ 79 (354)
T 3ly1_A 13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHHQ------VEAPSILLTAGSSE 79 (354)
T ss_dssp CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHTT------SCGGGEEEESHHHH
T ss_pred CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHhC------CChHHEEEeCChHH
Confidence 457899999999853 67899999999988863 446744 578999999999983 56789999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCcc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGN 199 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~ 199 (311)
++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.. .++.+|++.|++.++ ++++++++++|+||||.
T Consensus 80 a~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~ 156 (354)
T 3ly1_A 80 GIRAAIEAYASLE-AQLVIPELTYGDGEHFAKIAGMKVTKVKML--DNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGT 156 (354)
T ss_dssp HHHHHHHHHCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCC
T ss_pred HHHHHHHHHhCCC-CeEEECCCCchHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCC
Confidence 9999999999999 999999999999999999999999999875 357899999999987 78999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~ 278 (311)
+++.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++.
T Consensus 157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 229 (354)
T 3ly1_A 157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP------ 229 (354)
T ss_dssp CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH------
T ss_pred CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH------
Confidence 99999999999999 8999999999999988776544444333444 688999999999999999999999842
Q ss_pred hhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 279 KSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++..... +++|+++|+++.++|++
T Consensus 230 --~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 230 --TVIALMGRYVAG-EKINFSGVDAALASMND 258 (354)
T ss_dssp --HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC
T ss_pred --HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC
Confidence 478888877653 68899999999988864
No 56
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=2.1e-35 Score=274.66 Aligned_cols=254 Identities=21% Similarity=0.338 Sum_probs=209.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCcHHHHHHHHHHHhhcCC--CCCC
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----------FNCYAPMFGLPLARRAVAEYLNRDLP--YKLS 109 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~ 109 (311)
++..+|+|+.+.. ...++.+.+++.+...... ..+|.+..|..++|+++++++.+.++ +.++
T Consensus 36 ~p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~ 110 (435)
T 3piu_A 36 NTNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFD 110 (435)
T ss_dssp BTTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCC
T ss_pred CCCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 3567889998752 2237778887776543211 13699989999999999999986544 5577
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE----- 183 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 183 (311)
+++|++|+|+++++..++.+++++| |.|+++.|+|.++...+. ..|.+++.++.....++.+|++.|++.+++
T Consensus 111 ~~~v~~~~gg~~a~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 189 (435)
T 3piu_A 111 PNHLVLTAGATSANETFIFCLADPG-EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRN 189 (435)
T ss_dssp GGGEEEEEHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHEEEcCChHHHHHHHHHHhcCCC-CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999 999999999999988887 789999999987666778999999998865
Q ss_pred -CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC----------CCCeEEEe
Q 021547 184 -NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS----------IVPVITLG 252 (311)
Q Consensus 184 -~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~----------~~~~i~i~ 252 (311)
+++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.|++..+.++..+.. .++++++.
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~ 269 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVY 269 (435)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEE
T ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEE
Confidence 7899999999999999999999999999999999999999999998887766555443322 45789999
Q ss_pred cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||.|+++|+|+||++++++ .+++.++.... ...+++++|+++++++++
T Consensus 270 s~sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 270 SLSKDLGLPGFRVGAIYSNDD-------MVVAAATKMSS-FGLVSSQTQHLLSAMLSD 319 (435)
T ss_dssp ESSSSSCCGGGCEEEEEESCH-------HHHHHHHHHGG-GSCCCHHHHHHHHHHHHC
T ss_pred eeecccCCCceeEEEEEeCCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhcC
Confidence 999999999999999998653 36666665544 346789999999888764
No 57
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-34 Score=263.13 Aligned_cols=241 Identities=21% Similarity=0.265 Sum_probs=204.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+.+++|+|+.|.+. +++++.+.+++.+.+. ....|+ ..+..++|++++++++ +++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~-~~~~~~lr~~la~~~~------~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNENP----LGTSKKVAAIQANSSV--ETEIYP-DGWASSLRKEVADFYQ------LEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSCT----TCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHHT------CCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHHHH--HhhcCC-CcchHHHHHHHHHHhC------CChhhEEEeCCHHHH
Confidence 45799999999753 6788999999988664 344564 4688999999999994 567899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+..++.+++++| |+|+++.|+|..+...++..|.+++.++..+ ++.+|++++++.++++++++++++|+||||.+++
T Consensus 97 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~ 173 (363)
T 3ffh_A 97 IELLTRVLLDTT-TNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIE 173 (363)
T ss_dssp HHHHHHHHCSTT-CEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHccCC-CEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcC
Confidence 999999999999 9999999999999999999999999998753 5789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++.++++.|++ |+++|+|++|+.+.+ +.....+......+++|++.|+||.++++|+|+||++++. ++
T Consensus 174 ~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~ 243 (363)
T 3ffh_A 174 LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EI 243 (363)
T ss_dssp HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HH
T ss_pred HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HH
Confidence 9988888888877 999999999998877 4433444444456689999999999999999999999842 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++++++|+++.++|++
T Consensus 244 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~ 270 (363)
T 3ffh_A 244 IRQLNIVRP-PFNTTSIGQKLAIEAIKD 270 (363)
T ss_dssp HHHHHHTCC-SCCCBHHHHHHHHHHHHC
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence 888887755 567899999999988864
No 58
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.7e-35 Score=265.88 Aligned_cols=242 Identities=18% Similarity=0.224 Sum_probs=205.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+.+++|+|+.|.+. +++++.+++++.+.+. ....|++..+ .++|+++++++ ++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a 94 (365)
T 3get_A 28 GVKEVIKLASNENP----FGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQV 94 (365)
T ss_dssp TCSCCEECSSCCCT----TCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 34789999999854 6789999999999886 3457887666 89999999999 3567899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.+++++| |+|+++.|+|..+...++..|.+++.+++ ..+++ +|++++++.++++++++++++|+||||.+++
T Consensus 95 ~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 171 (365)
T 3get_A 95 IEFAIHSKLNSK-NAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLD 171 (365)
T ss_dssp HHHHHHHHCCTT-CEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHhCCC-CEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcC
Confidence 999999999999 99999999999999999999999999987 44667 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCC-CCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAF--GSTP-YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~-~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
.+++.+|+++| ++|+++|+|++|+.+.| .+.. ...+...+..+++++++|+||.|+++|+|+||++++.
T Consensus 172 ~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------- 243 (365)
T 3get_A 172 ASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA------- 243 (365)
T ss_dssp HHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH-------
T ss_pred HHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH-------
Confidence 99999999988 57999999999998775 4322 2223333345678999999999999999999999832
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++++..... .+++|+++|+++.++|++
T Consensus 244 -~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 244 -NIISAFYKLRA-PFNVSNLALKAAVAAMDD 272 (365)
T ss_dssp -HHHHHHHHHSC-TTCSCHHHHHHHHHHHTC
T ss_pred -HHHHHHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence 47788877755 356899999999988864
No 59
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.7e-35 Score=270.12 Aligned_cols=277 Identities=19% Similarity=0.164 Sum_probs=212.4
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~ 101 (311)
...+.++.+.....+. .++++|+|+.|.|. ..+..++++.+.+++.+.+......+|.+..|..++|+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 83 (394)
T 2ay1_A 8 QAPDKILALMGEFRAD----PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELIL 83 (394)
T ss_dssp CCCCSHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHhC----CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHh
Confidence 3445566666543322 46789999999852 112246789999999988765455689888899999999999985
Q ss_pred hcCCCCCCCCCEEE--eCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 102 RDLPYKLSADDIYI--TLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 102 ~~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
.. ..++++|++ |+|+++++++++.++.. +| |+|+++.|+|.++...++..|.+++.++....+++.+|++.+
T Consensus 84 ~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 159 (394)
T 2ay1_A 84 GD---GLKSETTATLATVGGTGALRQALELARMANPD-LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM 159 (394)
T ss_dssp GG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred CC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHH
Confidence 32 236789999 99999999999988865 89 999999999999999999999999999876556788999999
Q ss_pred HhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccCC-CCCeEEEe
Q 021547 178 EALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFGS-IVPVITLG 252 (311)
Q Consensus 178 ~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~~-~~~~i~i~ 252 (311)
++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. +..++..+.. .+++|+++
T Consensus 160 ~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 239 (394)
T 2ay1_A 160 KADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAA 239 (394)
T ss_dssp HHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEE
Confidence 998764 356677799999999999999999999999999999999999999877531 1122222221 34689999
Q ss_pred cCcccCCCCcceeeEEEe--eCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 253 SISKRWIVPGWRFGWLAT--NDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
|+||.|+++|+|+||+++ ++++ .. ..+++.++.. .....++++++|+++.++|++
T Consensus 240 s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 297 (394)
T 2ay1_A 240 SCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT 297 (394)
T ss_dssp ECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHS
T ss_pred eccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcC
Confidence 999999999999999997 3321 00 1233444433 233345699999999888764
No 60
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.4e-34 Score=264.69 Aligned_cols=267 Identities=21% Similarity=0.241 Sum_probs=200.4
Q ss_pred HHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547 29 RYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLNRDL 104 (311)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~ 104 (311)
.++.++......+..++++|+|+.|++. +++++.+.+++.+.+... ....|.+..|..++|+++++++. +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~ 90 (400)
T 3asa_A 17 ADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--R 90 (400)
T ss_dssp HHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--T
T ss_pred HHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--c
Confidence 3444333333323357889999999854 567899999998887531 24578887899999999999974 4
Q ss_pred CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcccCHHHHHhhcCC
Q 021547 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
|. +++++|++|+|+++++.+++. ++.+| |+|+++.|+|.++...++..|.+ ++.++...++++..+++ +. +
T Consensus 91 g~-~~~~~v~~~~G~~~al~~~~~-~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~---~~--~ 162 (400)
T 3asa_A 91 GF-VDAKEIFISDGAKVDLFRLLS-FFGPN-QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFP---ED--T 162 (400)
T ss_dssp TS-SCGGGEEEESCHHHHHHHHHH-HHCSS-CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCC---TT--C
T ss_pred CC-CCHHHEEEccChHHHHHHHHH-HcCCC-CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChh---hc--c
Confidence 54 678899999999999998765 45789 99999999999999999999998 89888754434444432 21 5
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCc
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPG 262 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G 262 (311)
+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..++. .+++|++.|+||.|+++|
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 242 (400)
T 3asa_A 163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG 242 (400)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT
T ss_pred CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc
Confidence 7899999999999999999999999999999999999999999988776543344555543 346899999999999999
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhh-hhc-cccCCCchhHHHHHhhhhc
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKA-CLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+||+++++......... +..+.. ... ...++|+++|.++.++|++
T Consensus 243 lriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 291 (400)
T 3asa_A 243 IRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSI 291 (400)
T ss_dssp CCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred hheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCc
Confidence 9999999864310000000 232221 122 1236899999999988864
No 61
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1.9e-34 Score=266.17 Aligned_cols=279 Identities=15% Similarity=0.078 Sum_probs=208.9
Q ss_pred HhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547 22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 100 (311)
..+++.|..+.+.+.+ ++.+.|||++|.+ +.....+..+.|++|...+.+.+..+.|.|..|+++||+++++++
T Consensus 26 ~~p~d~i~~l~~~~~~-----d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~ 100 (420)
T 4h51_A 26 AQAPDVIFDLAKRAAA-----AKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII 100 (420)
T ss_dssp CCCCCHHHHHHHHHHH-----CCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHhc-----CCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh
Confidence 3667788888765322 2344899999932 112334667899999888887766667999999999999999998
Q ss_pred hhcCCCCCCCCCE--EEeCChHHHHHHHHHHHh----cCCCCEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcccC
Q 021547 101 NRDLPYKLSADDI--YITLGCMEAVEIILTVIT----RLGAANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWEVD 173 (311)
Q Consensus 101 ~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~d 173 (311)
... ....+.+ +.|.|+|+|+..++..+. ++| |+|++++|+|++|...++..|.+ +..++....+++.+|
T Consensus 101 ~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pg-d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d 176 (420)
T 4h51_A 101 YGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAET-TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLN 176 (420)
T ss_dssp HC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTT-SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEEC
T ss_pred cCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCC-CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCC
Confidence 542 2233333 458899988877766664 589 99999999999999999999997 445555555667788
Q ss_pred HHHHHhhc---CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc---cccCCCCC
Q 021547 174 LEAVEALA---DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM---GVFGSIVP 247 (311)
Q Consensus 174 ~~~l~~~l---~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~---~~~~~~~~ 247 (311)
.+.+.+.+ .++++++++++||||||..++.+++++|+++|+++++++|+|++|.+|.|++...... ...+...+
T Consensus 177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
T 4h51_A 177 FEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE 256 (420)
T ss_dssp HHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce
Confidence 88877654 4577788888999999999999999999999999999999999999998875322221 11133457
Q ss_pred eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547 248 VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 248 ~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.||||.|+++|+|+||++++.+.... ...+..++... .....+++..+|.+++.++++
T Consensus 257 ~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d 319 (420)
T 4h51_A 257 VLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSN 319 (420)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred EEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcC
Confidence 899999999999999999999987653111 12233444434 344578899999999988875
No 62
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.5e-34 Score=269.36 Aligned_cols=281 Identities=22% Similarity=0.276 Sum_probs=216.7
Q ss_pred ccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCee-ecCCCCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 021547 11 FEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVI-PLGHGDPAAFPCFRTAAVAEDAIVDSVRS-------SM--- 79 (311)
Q Consensus 11 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i-~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-------~~--- 79 (311)
+.+|+...+ ...++.++.++..+.+... .+++| +|++|.|... .+..+.+.+++.+.+.. ..
T Consensus 2 ~~~s~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (444)
T 3if2_A 2 MKFSKFGQK--FTQPTGISQLMDDLGDALK---SDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAII 74 (444)
T ss_dssp CCCCHHHHH--HHSCCHHHHHHHHHHHHHH---SSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred CCcchhhhh--ccCchhHHHHHHHHHhhhc---CchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhh
Confidence 345544433 4556788888877765542 47899 9999997631 11125566666666654 21
Q ss_pred -CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC--------------EEEec-CC
Q 021547 80 -FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA--------------NILLP-RP 143 (311)
Q Consensus 80 -~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d--------------~Vl~~-~p 143 (311)
...|.+..|.+++|+++++++.+.+|+.+++++|++|+|+++++.+++.+++++| | +|+++ .|
T Consensus 75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~g-d~~~~~~~~~~g~~~~vi~~~~p 153 (444)
T 3if2_A 75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAF-VNEHSQDKESKSVDKSILLPLTP 153 (444)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEE-ECC-------CEEEEEEEESSSS
T ss_pred hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCC-ccccccccccccccceEEEeCCC
Confidence 2479998999999999999999989999999999999999999999999999999 8 78876 99
Q ss_pred CCcchHHH------HHHcCcEEEEeeccCCC---CcccCHHHHHhh---cCCCccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547 144 GWPFYESF------AKRNHIEVRHFDLLPER---GWEVDLEAVEAL---ADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 144 ~~~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 211 (311)
+|..|... +...|..++.++.+.++ ++.+|++.|+++ ++++++++++++|+||||.+++.+++++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 233 (444)
T 3if2_A 154 EYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAE 233 (444)
T ss_dssp CCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHH
Confidence 99988763 34567777777764322 357999999998 6788999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG 291 (311)
Q Consensus 212 l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 291 (311)
+|++||++||+|++|+.+.. +....... ....+++|++.|+||. +++|+|+||++++. ++++.+.....
T Consensus 234 ~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~ 302 (444)
T 3if2_A 234 IAKRYDIPLIIDNAYGMPFP-NIIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNA 302 (444)
T ss_dssp HHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCccc-cccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHH
Confidence 99999999999999985321 11111111 1224578999999997 99999999998743 47777776643
Q ss_pred -cccCCCchhHHHHHhhhhc
Q 021547 292 -VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 292 -~~~~~~~~~q~~~~~~l~~ 310 (311)
...++++++|.+++.++++
T Consensus 303 ~~~~~~~~~~~~a~~~~l~~ 322 (444)
T 3if2_A 303 VVNLAPTRFGAAIATPLVAN 322 (444)
T ss_dssp HHHSSCCCHHHHHHHHHHHT
T ss_pred hccCCCChHHHHHHHHHHHc
Confidence 4567899999999988864
No 63
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.8e-33 Score=255.60 Aligned_cols=240 Identities=18% Similarity=0.302 Sum_probs=198.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++++|+|+.|.+. +++++.+.+++.+.+.. ...|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES 88 (364)
T ss_dssp CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence 35679999999843 45789999999988753 346865 58999999999999 3467899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.++ +| |+|+++.|+|.++...++..|.+++.++....+++.+ ++.+.+.++++++++++++|+||||.+++
T Consensus 89 l~~~~~~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~ 164 (364)
T 1lc5_A 89 IFTVASGL--KP-RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPE 164 (364)
T ss_dssp HHHHHHHH--CC-SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCC
T ss_pred HHHHHHHc--CC-CeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCC
Confidence 99999999 78 9999999999999999999999999998754334443 56566666678899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE-eeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA-TNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~ 281 (311)
.+++++|+++|+++|+++|+||+|..+.+++.+. +..++..++++++.|+||.|+++|+|+||++ ++. +
T Consensus 165 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~ 234 (364)
T 1lc5_A 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------A 234 (364)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------H
T ss_pred HHHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------H
Confidence 9999999999999999999999999887753332 2223445678999999999999999999998 532 4
Q ss_pred HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.++.... .+++|+++|+++.++|++
T Consensus 235 ~~~~l~~~~~-~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 235 AMARMRRQQM-PWSVNALAALAGEVALQD 262 (364)
T ss_dssp HHHHHHHHSC-TTCSCHHHHHHHHHGGGC
T ss_pred HHHHHHHhCC-CCCCCHHHHHHHHHHHhC
Confidence 7777776654 457899999999998864
No 64
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1e-33 Score=257.17 Aligned_cols=241 Identities=20% Similarity=0.311 Sum_probs=206.0
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.|.+ .+++++.+.+++.+.+.......|+. .+..++|++++++++. . .+++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a 97 (367)
T 3euc_A 28 DSHGLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQV----P-AGMEVLLGNGSDEI 97 (367)
T ss_dssp CCTTCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTC----C-TTCEEEEEEHHHHH
T ss_pred CCCCeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCC----C-CcceEEEcCCHHHH
Confidence 4578999999984 36788999999999887434457866 5889999999999931 1 66899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~ 201 (311)
+.+++.+++++| |+|+++.|+|.++...++..|.+++.+++.. ++.+|++.|++.+++ +++++++++|+||||.++
T Consensus 98 ~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 174 (367)
T 3euc_A 98 ISMLALAAARPG-AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF 174 (367)
T ss_dssp HHHHHHHTCCTT-CEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHcCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence 999999999999 9999999999999999999999999998753 678999999999987 899999999999999999
Q ss_pred CHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 202 TYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+.+++++|+++|++| |+++|+|++|+.+.+.+ ... .+...++++++.|+||. +++|+|+||++++.
T Consensus 175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~------- 242 (367)
T 3euc_A 175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP------- 242 (367)
T ss_dssp CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GGGTCTTEEEEEECCCT-TSCSCCEEEEEECH-------
T ss_pred CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HHhhCCCEEEEecchhh-cccccCceeeeeCH-------
Confidence 999999999999999 99999999999876432 222 23445678999999999 99999999999843
Q ss_pred hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++++..... .+++|+++|+++.++|++
T Consensus 243 -~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 243 -QWLEQLDKVRP-PYNVNVLTEATALFALEH 271 (367)
T ss_dssp -HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT
T ss_pred -HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence 47788877654 457899999999988864
No 65
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2e-34 Score=266.17 Aligned_cols=268 Identities=22% Similarity=0.270 Sum_probs=196.5
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCcHHHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM----FNCYAPMFGLPLARRAVAE 98 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~ 98 (311)
..++.++.++....+.. .++++|+|++|.|... .++.+.+.+++.+.+.++. ...|.++.|..++|+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 86 (417)
T 3g7q_A 12 TRHSGITRLMEDLNDGL---RTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAV 86 (417)
T ss_dssp ----CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHH
T ss_pred hccccHHHHHHHHHhhc---cCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHH
Confidence 34566776666553332 4578999999997631 1123667777777765432 2379999999999999999
Q ss_pred HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC-----EEEec-CCCCcchHHHHHHc------CcEEEEeeccC
Q 021547 99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA-----NILLP-RPGWPFYESFAKRN------HIEVRHFDLLP 166 (311)
Q Consensus 99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~ 166 (311)
++.+.+|+++++++|++|+|+++++++++.+++++| | +|+++ .|+|.++...+... +..+..++..
T Consensus 87 ~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~g-d~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 164 (417)
T 3g7q_A 87 LLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRR-ADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG- 164 (417)
T ss_dssp HHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC-----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-
T ss_pred HHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCC-ccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-
Confidence 999989999999999999999999999999999998 7 89997 99999987665432 2233333221
Q ss_pred CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
..++.+|++.++ ++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.. +....... .+..+
T Consensus 165 ~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~ 240 (417)
T 3g7q_A 165 QFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNP 240 (417)
T ss_dssp EEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCT
T ss_pred ccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCC
Confidence 124678999888 677899999999999999999999999999999999999999999986321 11111111 12245
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++|++.|+|| ++++|+|+||++++. ++++++..... ...++++++|+++++++++
T Consensus 241 ~~i~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 296 (417)
T 3g7q_A 241 NIILCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKR 296 (417)
T ss_dssp TEEEEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHT
T ss_pred CEEEEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcC
Confidence 7899999999 599999999998743 47787777643 4567899999999998864
No 66
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-33 Score=253.90 Aligned_cols=238 Identities=20% Similarity=0.299 Sum_probs=199.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++++|+|+.|.+. +++++.+.+++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYP-DVNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCC-CTTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCC-CccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 57899999999753 56789999999998875 34674 468899999999999 3577899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.++ |+|+++.|+|.++...++..|.+++.+++.... .++++.+++.+++ ++++++++|+||||.+++
T Consensus 91 l~~~~~~~-----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 162 (361)
T 3ftb_A 91 IELSISLF-----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLIN 162 (361)
T ss_dssp HHHHHTTC-----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCC
T ss_pred HHHHHHHc-----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCC
Confidence 99999888 799999999999999999999999999876433 4677999999988 999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+++++|+++|++||+++|+|++|..+.++ .....+......++++++.|+||.++++|+|+||+++.++ ++
T Consensus 163 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~-------~~ 234 (361)
T 3ftb_A 163 KEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK-------EI 234 (361)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH-------HH
T ss_pred HHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH-------HH
Confidence 999999999999999999999999998876 3333344444556889999999999999999999984432 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++|+++|+++.+.|++
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 261 (361)
T 3ftb_A 235 AAKIKAKQN-PWNINCFAEMAAINCLKD 261 (361)
T ss_dssp HHHHHTTSC-TTCSCHHHHHHHHHTSSC
T ss_pred HHHHHhhCC-CCCCCHHHHHHHHHHhcC
Confidence 888877655 458899999999988864
No 67
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=5e-37 Score=281.81 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=213.1
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+++|+|+.|++. +++++.+.+++.+.+... ...|.+. ..++|+++++++.+.+|+.+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~ 103 (392)
T 3b1d_A 31 PQLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAIS 103 (392)
Confidence 389999999864 677899999999887643 3467764 789999999999988888888899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~ 202 (311)
+++.+++++| |+|+++.|+|..+...++..|.+++.++..+.+ +|.+|++.+++.++ .+++++++++|+||||.+++
T Consensus 104 ~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (392)
T 3b1d_A 104 IAIQAFTKEG-EAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWE 182 (392)
Confidence 9999999999 999999999999999999999999988874332 46789999999887 67889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
.+++++|+++|+++|+++|+||+|..+.+++..+.++..++. .++++++.|+||.|+++|+|+||+++++++
T Consensus 183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~------ 256 (392)
T 3b1d_A 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPT------ 256 (392)
Confidence 999999999999999999999999999887655556655544 567899999999999999999999986543
Q ss_pred hHHHHHhhhhccc--cCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLGVR--SGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~ 310 (311)
+++.++...... .++++++|+++.++|++
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 257 -LCAQFKHQQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 666666654422 35789999988887754
No 68
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.3e-34 Score=266.75 Aligned_cols=245 Identities=18% Similarity=0.158 Sum_probs=197.6
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHH--hc-CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSV--RS-SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~--~~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+|+|+.|.|... .+++++.+.+++.+.+ .. ....+|++..|.+++|+++++++ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 4899999986410 1456667777776543 12 23558999999999999999999 3578899999999999
Q ss_pred H--HHHHHHHhcC------------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccE
Q 021547 123 V--EIILTVITRL------------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAA 187 (311)
Q Consensus 123 ~--~~~~~~l~~~------------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 187 (311)
+ .+++.++..+ + |+|+++.|+|..|...++..|.+++.++++.+ ++|++.+++.+++ ++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~-~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~ 181 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEK-VKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKG 181 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSC-CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCC-CEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeE
Confidence 7 6777888765 4 68999999999999999999999999998542 4899999998875 7888
Q ss_pred EE-EeCCCCCCccCCCHHHHHHHHHHHH-HhCCEEEEeccccC--CccCCCCCCcccc----cCCCCCeEEEecCcccCC
Q 021547 188 IV-IINPCNPCGNVLTYQHLQKIAETAR-KLGILVIADEVYGH--LAFGSTPYIPMGV----FGSIVPVITLGSISKRWI 259 (311)
Q Consensus 188 i~-i~~p~nptG~~~~~~~l~~l~~l~~-~~~~~li~D~ay~~--~~~~~~~~~~~~~----~~~~~~~i~i~s~sK~~~ 259 (311)
++ +++|+||||.+++.+++++|+++|+ ++|++||+||+|.. +.+++.++.++.. .+..+++|+++||||. +
T Consensus 182 v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~ 260 (422)
T 3d6k_A 182 MWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-T 260 (422)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-S
T ss_pred EEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-c
Confidence 87 6799999999999999999999999 99999999999986 4444333334422 2345689999999998 8
Q ss_pred CCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 260 VPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+||+|+||++++. ++++.+..... .++++++++|++++++|++
T Consensus 261 ~~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 261 HAGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp CTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred CcccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 9999999999853 47777776643 4567899999999998875
No 69
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.4e-34 Score=265.89 Aligned_cols=247 Identities=16% Similarity=0.151 Sum_probs=199.9
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAI--VDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
...+|+|+.|.|+.. .++.++.+.+++ .+.+... ...+|++..|..++|+++++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 356899999987621 122233455555 4444322 3568999899999999999999 4678899999999
Q ss_pred HHHH--HHHHHHHhc--C----------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CC
Q 021547 120 MEAV--EIILTVITR--L----------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-EN 184 (311)
Q Consensus 120 ~~a~--~~~~~~l~~--~----------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~ 184 (311)
++++ .+++.+++. + | |+|+++.|+|..+...++..|.+++.++++.+ ++|++.|++.++ ++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~g-d~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~ 180 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEET-VKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQ 180 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSC-CEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCC-CEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCC
Confidence 9999 588888877 6 8 99999999999999999999999999998642 499999999985 57
Q ss_pred ccEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEEEEeccccCCccCCCC--CCccccc----CCCCCeEEEecCcc
Q 021547 185 TAAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILVIADEVYGHLAFGSTP--YIPMGVF----GSIVPVITLGSISK 256 (311)
Q Consensus 185 ~~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~li~D~ay~~~~~~~~~--~~~~~~~----~~~~~~i~i~s~sK 256 (311)
+++++++ +|+||||.+++.+++++|+++| +++|++||+||+|+.+.|++.+ +.++..+ +..+++|+++||||
T Consensus 181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 260 (427)
T 3ppl_A 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK 260 (427)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence 8888755 7899999999999999999999 9999999999999998886543 2233332 24568999999999
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
. +++|+|+||++++. ++++.+..... ...++++++|.+++.+|++
T Consensus 261 ~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 261 I-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred c-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 9 89999999999853 47777776643 4568899999999998875
No 70
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=4.2e-33 Score=252.70 Aligned_cols=231 Identities=19% Similarity=0.296 Sum_probs=190.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+++|+|+.|.+. +++++.+ + + ....+|++. +..++|+++++++ ++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v--a----~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL--T----Q--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC--C----C--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH--h----h--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999754 3444444 1 1 234578775 5899999999999 356789999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
.++.+++++|.|+|+++.|+|..|...++..|.+++.++.. +++.+|++++++.++ +++++++++|+||||.+++.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 99999987765799999999999999999999999998865 457799999999888 899999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG 284 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 284 (311)
++++|+++|+ +|+++|+||+|..+.. +.+... ..+..++++++.|+||.|+++|+|+||++++. ++++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~ 234 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCP-QASLAG--WLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVIN 234 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSG-GGCSGG--GTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcC-CCcHHH--HHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHHH
Confidence 9999999999 9999999999998652 111111 12344678999999999999999999999842 4778
Q ss_pred HHhhhhccccCCCchhHHHHHhhhhc
Q 021547 285 SIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
.++.... .+++|+++|+++.++|++
T Consensus 235 ~l~~~~~-~~~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 235 LLMKVIA-PYPLSTPVADIAAQALSP 259 (356)
T ss_dssp HHHHHSC-SSCSCHHHHHHHHHHTSH
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence 8877654 347899999999888764
No 71
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.3e-32 Score=250.49 Aligned_cols=241 Identities=17% Similarity=0.262 Sum_probs=198.8
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
.|+|+.|.+. +++++.+.+++.+.+... ....|++..+ .++|+++++++++.+|.++++++|++|+|+++++.
T Consensus 32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 4899999853 568899999999887642 2447877656 79999999999988888888899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~ 203 (311)
+++.+++++| |+|+++.|+|.++...++..|.+++.++.+ +++.+|++.+++.+++ +++++++++|+||||.+++.
T Consensus 107 ~~~~~l~~~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~ 183 (369)
T 3cq5_A 107 QLLQAFGGPG-RTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSL 183 (369)
T ss_dssp HHHHHHCSTT-CEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999 999999999999999999999999999853 4567999999998877 88999999999999999995
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
+++. ++|+.+++++|+||+|+.+.++ .+ .+...+..+ +++++.|+||.++++|+|+||++++. ++
T Consensus 184 ~~l~---~l~~~~~~~li~De~~~~~~~~-~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 249 (369)
T 3cq5_A 184 DDVE---RIINVAPGIVIVDEAYAEFSPS-PS--ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AF 249 (369)
T ss_dssp HHHH---HHHHHCSSEEEEECTTGGGCCS-CC--GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HH
T ss_pred HHHH---HHHHhCCCEEEEECCchhhcCC-cc--hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HH
Confidence 5555 5555667999999999987653 11 122223345 78999999999999999999999853 37
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++|+++|+++.++|++
T Consensus 250 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 250 IDAVMLVRL-PYHLSALSQAAAIVALRH 276 (369)
T ss_dssp HHHHHTTSC-TTCSCHHHHHHHHHHHHT
T ss_pred HHHHHHcCC-CCCCCHHHHHHHHHHhcC
Confidence 777776654 346899999999888864
No 72
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2.5e-33 Score=267.49 Aligned_cols=235 Identities=14% Similarity=0.252 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHhhhccCCCC----CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH-
Q 021547 26 AAFRYAIVSLMESVDKNDPR----PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL- 100 (311)
Q Consensus 26 ~~i~~~~~~~~~~~~~~~~~----~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l- 100 (311)
+.++..+..+.+...+..+. .+|+|+.|.|. + +++.+.+++.+.+.. .+|+++.|..++|+++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~ 152 (546)
T 2zy4_A 81 DGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYI 152 (546)
T ss_dssp TTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHhcCCCCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHH
Confidence 46666665554443211111 28999999864 3 346677777776642 47999889999999977765
Q ss_pred hhcCCCCC---CCCCEEEeCChHHHHHHHHHHH-----hcCCCCEEEecCCCCcchHHHHHHc--CcEEEEeeccCCCCc
Q 021547 101 NRDLPYKL---SADDIYITLGCMEAVEIILTVI-----TRLGAANILLPRPGWPFYESFAKRN--HIEVRHFDLLPERGW 170 (311)
Q Consensus 101 ~~~~g~~~---~~~~v~~t~g~~~a~~~~~~~l-----~~~g~d~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~ 170 (311)
.++++... .+++|++|+|+++++..++.++ +++| |+|++++|+|+.|...+... |.+++.++.+.+++|
T Consensus 153 ~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~ 231 (546)
T 2zy4_A 153 IREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAG-DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNW 231 (546)
T ss_dssp HHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTT-CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTT
T ss_pred HHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCC-CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCC
Confidence 44444322 4689999999999999999884 6899 99999999999998876554 688888887766778
Q ss_pred ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHH--HHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA--RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~--~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
.+|++.|++.+.++++++++++|+||||.+++.+++++|+++| +++|++||+||+|+.+.++ +.++.... .+++
T Consensus 232 ~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~ 307 (546)
T 2zy4_A 232 QYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENT 307 (546)
T ss_dssp BCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGE
T ss_pred CCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCE
Confidence 8999999998888899999999999999999999999999999 7899999999999988753 22333322 3579
Q ss_pred EEEecCcccCCCCcceeeEEEeeCC
Q 021547 249 ITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 249 i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
|+++||||.||++|+|+||++++++
T Consensus 308 i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 308 LLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp EEEEESTTTTTCGGGCEEEEEEESS
T ss_pred EEEEeCccccCCCCcceEEEEECCH
Confidence 9999999999999999999998764
No 73
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.7e-33 Score=260.71 Aligned_cols=246 Identities=20% Similarity=0.294 Sum_probs=201.1
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIV--DSVRSS-MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
..+|+|+.|.|+.. .++.++.+.+++. +.+..+ ...+| .+..|.+++|+++++++ ++++++|++|+|++
T Consensus 25 ~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~ 97 (423)
T 3ez1_A 25 GLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNSS 97 (423)
T ss_dssp TCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSCH
T ss_pred CceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCcH
Confidence 46799999997521 1466777888875 444422 34689 88889999999999999 45788999999999
Q ss_pred HHHH--HHHHHHhc--C---------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCc
Q 021547 121 EAVE--IILTVITR--L---------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENT 185 (311)
Q Consensus 121 ~a~~--~~~~~l~~--~---------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~ 185 (311)
+++. +++.+++. + | |+|+++.|+|..+...++..|.+++.+++..+ ++|++.|++.+ .+++
T Consensus 98 ~al~~~~~~~~l~~~~~g~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~ 173 (423)
T 3ez1_A 98 LELQGLVLTFALLHGVRGSTGPWLSQT-PKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp HHHHHHHHHHHHHTCCTTCSSCGGGGC-CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHhccCCCccccccCCC-CEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence 9998 88899887 7 5 99999999999999999999999999998642 59999999988 5688
Q ss_pred cEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEEEEeccccCCccCC---CCCCccccc----CCCCCeEEEecCcc
Q 021547 186 AAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILVIADEVYGHLAFGS---TPYIPMGVF----GSIVPVITLGSISK 256 (311)
Q Consensus 186 ~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~li~D~ay~~~~~~~---~~~~~~~~~----~~~~~~i~i~s~sK 256 (311)
+++++. +|+||||.+++.+++++|+++| +++|++||+||+|..+.|.+ .++.++..+ +..+++|+++|+||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 888654 8899999999999999999999 99999999999999766543 223333322 34568999999999
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
. +++|+|+||++++. ++++.++.... ...++++++|.+++++|++
T Consensus 254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 8 78999999999853 47788777643 4578899999999988864
No 74
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.7e-32 Score=249.91 Aligned_cols=221 Identities=22% Similarity=0.341 Sum_probs=188.7
Q ss_pred HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH
Q 021547 70 AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE 149 (311)
Q Consensus 70 a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~ 149 (311)
++.+.+.... ..|.+..|..++|+++++++. .+.+++|++|+|+++++.+++.+++++| |+|+++.|+|.++.
T Consensus 47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~ 119 (375)
T 3op7_A 47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPG-DHVISLYPTYQQLY 119 (375)
T ss_dssp HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESSCTHHH
T ss_pred HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCC-CEEEEeCCCchhHH
Confidence 3444444443 479998999999999999884 3567899999999999999999999999 99999999999999
Q ss_pred HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
..++..|.+++.+++...+++.+|++.|++.++++++++++++|+||||.+++.+++++|.++|++||+++|+|++|+.+
T Consensus 120 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 120 DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 99999999999999876677889999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 230 AFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.++ +...+.. ..++++++.|+||.++++|+|+||++++. +++++++.... ...++++++|+++...+
T Consensus 200 ~~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (375)
T 3op7_A 200 SEL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLAL 267 (375)
T ss_dssp SSS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHH
T ss_pred ccc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHH
Confidence 765 2222222 24467999999999999999999999832 48888887754 35677889998888776
Q ss_pred h
Q 021547 309 V 309 (311)
Q Consensus 309 ~ 309 (311)
+
T Consensus 268 ~ 268 (375)
T 3op7_A 268 A 268 (375)
T ss_dssp H
T ss_pred h
Confidence 5
No 75
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.3e-31 Score=240.26 Aligned_cols=230 Identities=18% Similarity=0.204 Sum_probs=189.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
..+++|+|+.+.+ .++++|.+.+++.+.... ...|+ ..|..++|+++++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~ 80 (337)
T 3p1t_A 14 AAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC 80 (337)
T ss_dssp CCCCCEECSSCCC----CSCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred CCCCceEeeCCCC----CCCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence 4678999999963 267889999999988763 44785 468999999999999 3577899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+.+++.++ +| |+|+++.|+|.++...++..|.+++.++.+ .++.+|++.+++. .+++++++++|+||||.+++
T Consensus 81 l~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~ 153 (337)
T 3p1t_A 81 FDRISAEF--SS-MRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS 153 (337)
T ss_dssp HHHHHHHS--TT-SEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhc--CC-CeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCC
Confidence 99999998 89 999999999999999999999999999874 4578999999886 46789999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI 282 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 282 (311)
.+ ++.++|+++++ +|+||+|+.+.+.+.. . ....+++++++|+||.|+++|+|+||++++. ++
T Consensus 154 ~~---~l~~l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~ 216 (337)
T 3p1t_A 154 AG---ELDQLRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------EL 216 (337)
T ss_dssp HH---HHHHHHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HH
T ss_pred HH---HHHHHHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HH
Confidence 55 55556677786 6669999986654321 1 1234578999999999999999999999853 47
Q ss_pred HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 283 VGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++.++.... .+++++++|.++.++|++
T Consensus 217 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 217 IAAMKRKQW-FCNVGTLDLHALEAALDN 243 (337)
T ss_dssp HHHHHTTSC-TTCSCHHHHHHHHHHHTC
T ss_pred HHHHHhhcC-CCCCCHHHHHHHHHHhCC
Confidence 777776644 457889999999888864
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.2e-32 Score=245.86 Aligned_cols=229 Identities=17% Similarity=0.208 Sum_probs=189.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++++|+|+.+.+. +++++.+.+++.+.+. ....|+++.+ .++|+++++++ ++++++|++|+|++++
T Consensus 13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA 79 (350)
T ss_dssp ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46899999999854 6788999999998873 3447887766 89999999998 3577899999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec-cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL-LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
+.+++.++. | |+|+++.|+|..+...++..|.+++.++. +..++ +++ ++++++++++|+||||.++
T Consensus 80 l~~~~~~l~--g-d~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~ 146 (350)
T 3fkd_A 80 FYQIAQAFR--G-SRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLL 146 (350)
T ss_dssp HHHHHHHTT--T-CEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHC--C-CEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCC
Confidence 999999998 8 99999999999999999999999999987 43222 332 5789999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
+.+++.+|+++|+++ +||+|++|..+.+++... ...++..++++++.|+||.++++|+|+||++++. +
T Consensus 147 ~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~ 214 (350)
T 3fkd_A 147 QRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------D 214 (350)
T ss_dssp CHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------H
T ss_pred CHHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------H
Confidence 988888888888755 999999999988765432 2344556789999999999999999999999832 4
Q ss_pred HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++++.... .+++++++|+++.++|++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 215 FMKRVAAFST-PWAVNALAIEAAKFILIH 242 (350)
T ss_dssp HHHHHHTTCC-TTCSCHHHHHHHHHHHHC
T ss_pred HHHHHHHhCC-CCCCCHHHHHHHHHHHhC
Confidence 7888887765 457899999999998875
No 77
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=2.4e-32 Score=260.36 Aligned_cols=215 Identities=21% Similarity=0.351 Sum_probs=181.7
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhc-CC-CCCC-CCCEEEeCChHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRD-LP-YKLS-ADDIYITLGCME 121 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~-~g-~~~~-~~~v~~t~g~~~ 121 (311)
.+|+|+.|.|+ ++ ++.+.+++.+.+... .|. +..|..++|+++++++... .+ +... +++|++|+|+++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~ 175 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence 57899999865 33 566666666666532 454 7789999999999999765 34 4454 479999999999
Q ss_pred HHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC--CCCcccCHHHHHhhcCCCccEEEEeCCC
Q 021547 122 AVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP--ERGWEVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 122 a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
++..++.+ ++++| |+|+++.|+|.++...++..|.+++.+++.. .+++.+|++.|++.++++++++++++|+
T Consensus 176 al~~~~~~l~~~~l~~~g-d~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~ 254 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKG-DKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPT 254 (533)
T ss_dssp HHHHHHHHHHHTTSSCTT-CEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSC
T ss_pred HHHHHHHHhhhhhccCCc-CEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCC
Confidence 99999998 67899 9999999999999999999999999998765 5678999999999999999999999999
Q ss_pred CCCccCCCHHHHHHHHHHHH-HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 195 NPCGNVLTYQHLQKIAETAR-KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~-~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
||||.+++.+++++|+++|+ +||++||+||+|+.+.++.. ++.... .+++|+++||||.||++|+|+||+++++.
T Consensus 255 NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 255 NPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred CCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcH
Confidence 99999999999999999999 68999999999998876432 222222 35889999999999999999999999765
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.9e-31 Score=241.78 Aligned_cols=234 Identities=18% Similarity=0.297 Sum_probs=190.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++++|+|+.|++. +++++.+.+++.+.+... ....|+.. +..++|++++++++ +++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~g------~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELYG------FDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHHT------CCGGGEEEESSHH
T ss_pred cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHhC------cCcceEEEcCCHH
Confidence 45789999999864 678999999999998754 13467654 67999999999993 5778999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
+++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+. ++.+ +++++.+ +++++++++|+||||.+
T Consensus 93 ~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~ 165 (360)
T 3hdo_A 93 EVLNNLIRAFAAEG-EEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPS 165 (360)
T ss_dssp HHHHHHHHHHCCTT-CEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHhCCC-CEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCC
Confidence 99999999999999 9999999999999999999999999998743 3334 4444433 46799999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
++ ++++.++|+++|+++|+|++|+.+. +.....+ .+..++++++.|+||.|+++|+|+||++++.
T Consensus 166 ~~---~~~l~~l~~~~~~~li~De~~~~~~--~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------- 230 (360)
T 3hdo_A 166 FP---LEYIDELARRCAGMLVLDETYAEFA--ESNALEL--VRRHENVVVTRTLSKSYSLAGMRIGLAIARP-------- 230 (360)
T ss_dssp CC---HHHHHHHHHHBSSEEEEECTTGGGS--SCCCTHH--HHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------
T ss_pred cC---HHHHHHHHHHCCCEEEEECChHhhC--CcchhHH--hccCCCEEEEecchHhhcCCccceeeEeeCH--------
Confidence 99 5566777789999999999999863 3332222 2334678999999999999999999999842
Q ss_pred hHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547 281 GIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
++++.++.... .+++++++|+++.++|++
T Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 231 EVIAALDKIRD-HYNLDRLAQAACVAALRD 259 (360)
T ss_dssp HHHHHHHHHSC-SCCSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence 47888877755 357899999999988864
No 79
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.98 E-value=1.4e-31 Score=240.48 Aligned_cols=229 Identities=18% Similarity=0.283 Sum_probs=186.7
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+++|+|+.|.+. +++++.+.+++.+.+.......|+. .+..++|+++++++.+. .+++++|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999853 5678999999998874333446765 47999999999999643 356789999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
.++.++ | |+|+++ |+|.++...++..|.+++.++.+ +++.+|++.+ ++++++++++|+||||.+++.+
T Consensus 91 ~~~~~~---g-d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~ 158 (335)
T 1uu1_A 91 VMMLMF---D-RSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFERE 158 (335)
T ss_dssp HHHHHS---S-EEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHh---C-CcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHH
Confidence 999998 8 999999 99999999999999999998864 3466787766 5789999999999999999988
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG 284 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 284 (311)
++.+|+++| | ++|+||+|..+.++ +... .++..++++++.|+||.|+++|+|+||++++. ++++
T Consensus 159 ~l~~l~~~~---~-~li~De~~~~~~~~--~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~ 222 (335)
T 1uu1_A 159 EIERILKTG---A-FVALDEAYYEFHGE--SYVD--FLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFID 222 (335)
T ss_dssp HHHHHHHTT---C-EEEEECTTHHHHCC--CCGG--GGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHH
T ss_pred HHHHHHHhC---C-EEEEECcchhhcch--hHHH--HhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHH
Confidence 888888877 8 89999999976532 2222 23345578999999999999999999999842 4777
Q ss_pred HHhhhhccccCCCchhHHHHHhhhhc
Q 021547 285 SIKACLGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 285 ~~~~~~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+++.... .+++|+++|+++.++|++
T Consensus 223 ~l~~~~~-~~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 223 AYNRVRL-PFNVSYVSQMFAKVALDH 247 (335)
T ss_dssp HHHHHSC-TTCSCHHHHHHHHHHHHT
T ss_pred HHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence 7776654 358899999999998864
No 80
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.97 E-value=1.4e-32 Score=252.51 Aligned_cols=232 Identities=18% Similarity=0.190 Sum_probs=179.7
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh-c--CCCCCCCCCCCc-----HHHHHHHHHHHhhcCCCCCCC-CCE
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR-S--SMFNCYAPMFGL-----PLARRAVAEYLNRDLPYKLSA-DDI 113 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~-~--~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~g~~~~~-~~v 113 (311)
.++++|+|+.|.|+ ++.++.+.+++.+... . ....+|++..|. ++||++++++++ .+|+.+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 47789999999975 4555666666533322 1 134579999998 999999999998 46777777 599
Q ss_pred EEeCChHHHHHHHHHHHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 114 YITLGCMEAVEIILTVITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
++|+|+++++.+++.+++++| | +|+++.|+|..|...++..|.+++.++++.+ + +. .+++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~G-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~ 162 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLA-RSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIEL 162 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTS-SSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCC-CCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEE
Confidence 999999999999999999999 9 9999999999999999999999988876431 1 11 25789999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++|+||||.+++ +|++.++.++++||+|++|.. + ...++.. ..+++|+++||||.|+++|+|+||++
T Consensus 163 l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~ 230 (391)
T 3bwn_A 163 VTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWAL 230 (391)
T ss_dssp EESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEE
T ss_pred ECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEE
Confidence 9999999999997 344422223399999999983 1 2223332 34578999999999999999999999
Q ss_pred eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 270 TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
+.++ ++++.+..... ...++++++|.+++++|++
T Consensus 231 ~~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 231 VKDK-------EVAKKMVEYIIVNSIGVSKESQVRTAKILNV 265 (391)
T ss_dssp ECCH-------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred ecCH-------HHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence 7332 47777777654 3468899999999998864
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.97 E-value=3.8e-31 Score=245.61 Aligned_cols=230 Identities=15% Similarity=0.128 Sum_probs=186.9
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCC-C---cHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMF-G---LPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~-g---~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
+..+|+|+.|+|. ++.++.+.+++.+.+..... ..|.+.. | .++||++++++++++.+..+++++|++|+
T Consensus 55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 4578999999975 56678888888877632222 2498887 8 99999999999998777677899999999
Q ss_pred ChHHHHHHHHHHH--------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 118 GCMEAVEIILTVI--------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 118 g~~~a~~~~~~~l--------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
|+++++.+++.+| +++| |+|+++.|+|..|...++..|.+++.+ .+|++.|++.+++++++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~ 201 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPE-SKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEM 201 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCC-EEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCCCC-CEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEE
Confidence 9999999999999 8999 999999999999999999999887643 4578889888888899999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++|+||||.+++ +.+ + ++..+.|++|.. ++.++..++ .+++|+++||||.|+++|+|+||++
T Consensus 202 l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~ 264 (427)
T 2hox_A 202 VTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWAL 264 (427)
T ss_dssp EESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred EcCCCCCcccccH-HHH-------c--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEE
Confidence 9999999999999 422 2 566777777642 223333333 5578999999999999999999999
Q ss_pred eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547 270 TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 310 (311)
++++ +++++++.+.. ...+++.++|.+++++|++
T Consensus 265 ~~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 299 (427)
T 2hox_A 265 IKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKE 299 (427)
T ss_dssp ECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred ECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhc
Confidence 8543 47888887754 3468899999999988864
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.96 E-value=2.2e-28 Score=224.43 Aligned_cols=237 Identities=15% Similarity=0.102 Sum_probs=184.6
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
++++|+|+.|.| +.+++++.+.+++.+.+... ....|.+..|..++++++++++.+.+|. +++++|+|+++
T Consensus 42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~ 114 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQ 114 (398)
T ss_dssp TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHH
T ss_pred CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHH
Confidence 567899999986 24557899999999887642 2334666678888888888888876663 58999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCCC
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNPC 197 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~npt 197 (311)
++..++.+++++| |.|+++.|+|..+...++..|.+++.++. +|+++|++.+++ +++++++++|+|||
T Consensus 115 a~~~~~~~~~~~g-d~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~npt 186 (398)
T 3a2b_A 115 SNLGPLSCLMGRN-DYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSME 186 (398)
T ss_dssp HHHHHHHHSSCTT-CEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTT
T ss_pred HHHHHHHHHhCCC-CEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCC
Confidence 9999999999999 99999999999999999999999998875 488999988765 78899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCcccCCCCcceeeEEEeeCCCCc
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGWLATNDPNGV 276 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~i~~~~~~~~ 276 (311)
|.+++ +++|.++|+++|+++|+|++|+.+.++.........++..++ +++++|+||.++.+| ||++++.
T Consensus 187 G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~---- 256 (398)
T 3a2b_A 187 GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA---- 256 (398)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH----
T ss_pred CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH----
Confidence 99998 899999999999999999999987664211111122222234 599999999999888 9998853
Q ss_pred cchhhHHHHHhhh-h-ccccCCCchhHHH-HHhhhh
Q 021547 277 LQKSGIVGSIKAC-L-GVRSGPSTLIQVC-EMFLLV 309 (311)
Q Consensus 277 ~~~~~~~~~~~~~-~-~~~~~~~~~~q~~-~~~~l~ 309 (311)
++++.++.. . ....+++.+.|.+ +.+.|+
T Consensus 257 ----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~ 288 (398)
T 3a2b_A 257 ----DVIDFLKHNARSVMFSASMTPASVASTLKALE 288 (398)
T ss_dssp ----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhcccceecCCCCHHHHHHHHHHHH
Confidence 467777653 2 1233455666764 445553
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.96 E-value=1.7e-27 Score=219.47 Aligned_cols=223 Identities=16% Similarity=0.093 Sum_probs=176.9
Q ss_pred eeecCCCCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCcH---HHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSMFNCYAPMFGLP---LARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~----~~~~~~Y~~~~g~~---~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..+++.++|+ ++.++.+.+++.+..+ ......|+. .|.+ +++++++++++. +++++++|+
T Consensus 20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~~~~g 86 (404)
T 1e5e_A 20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVATSSG 86 (404)
T ss_dssp CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEEESSH
T ss_pred CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEEeCCh
Confidence 3568888876 3444444444444332 222346776 5666 899999999832 478888888
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN 195 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n 195 (311)
++++..++.+++++| |+|+++.|.|.++.. .++..|.+++.++.. |++.+++.++++++++++++|+|
T Consensus 87 ~~ai~~~~~~l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~N 158 (404)
T 1e5e_A 87 MGAIAATVLTILKAG-DHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPAN 158 (404)
T ss_dssp HHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCT
T ss_pred HHHHHHHHHHHhCCC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCC
Confidence 999999999999999 999999999999887 788899999998763 78899999998999999999999
Q ss_pred CCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCC
Q 021547 196 PCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDP 273 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~ 273 (311)
|||.+++ +++|+++|++ +|+++|+|++|..+.+. .++ .+ ++++++.|+||.|+++|+|+ ||+++++
T Consensus 159 ptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~- 226 (404)
T 1e5e_A 159 PTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA- 226 (404)
T ss_dssp TTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH-
T ss_pred CCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH-
Confidence 9999998 9999999999 99999999999987653 122 12 36699999999999999998 9999864
Q ss_pred CCccchhhHHH-HHhhhhcc--ccCCCchhHHHHHhhhh
Q 021547 274 NGVLQKSGIVG-SIKACLGV--RSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 274 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~q~~~~~~l~ 309 (311)
++++ +++..... +.+++++.|+++.+.++
T Consensus 227 -------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~ 258 (404)
T 1e5e_A 227 -------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS 258 (404)
T ss_dssp -------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh
Confidence 3566 77766443 45688889988877765
No 84
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=6.2e-27 Score=215.74 Aligned_cols=213 Identities=17% Similarity=0.217 Sum_probs=171.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM------FNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
++++|+|+.|.+. +.++.+.+++.+.+.... ...|++ ..+..++|+++++++... +++++++
T Consensus 26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~ 95 (420)
T 1t3i_A 26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY 95 (420)
T ss_dssp TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE
Confidence 3558999999853 567899999998886421 123443 356788999999998421 5689999
Q ss_pred eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
|+|+++++.+++.++ +++| |+|+++.|+|.. +...++..|.+++.++.+ .++.+|++++++.+++++++
T Consensus 96 ~~g~t~a~~~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 172 (420)
T 1t3i_A 96 TRNATEAINLVAYSWGMNNLKAG-DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL 172 (420)
T ss_dssp ESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred cCChHHHHHHHHHHhhhcccCCC-CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence 999999999999999 8899 999999999998 567778899999999875 45679999999999989999
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
+++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ...+..+ +..+++.|+||.++.+| +||
T Consensus 173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~di~~~s~sK~~~~~g--~G~ 240 (420)
T 1t3i_A 173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLI---DCDWLVASGHKMCAPTG--IGF 240 (420)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhc---CCCEEEEehhhhcCCCc--eEE
Confidence 999999999999999 89999999999999999999986321 1122222 24589999999988777 999
Q ss_pred EEeeCCCCccchhhHHHHHhhh
Q 021547 268 LATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++++. +++++++..
T Consensus 241 ~~~~~--------~~~~~~~~~ 254 (420)
T 1t3i_A 241 LYGKE--------EILEAMPPF 254 (420)
T ss_dssp EEECH--------HHHHHSCCC
T ss_pred EEEch--------HHHhhcCce
Confidence 99853 466776654
No 85
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=2.8e-27 Score=214.68 Aligned_cols=205 Identities=13% Similarity=0.113 Sum_probs=161.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHH-HHHHHhhcCCCCCCCCCEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--------FNCYAPMFGLPLARRA-VAEYLNRDLPYKLSADDIY 114 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~l~~~~g~~~~~~~v~ 114 (311)
.+++++|+.|.+ ..++++.+.+++.+.+.... ...|.+..+..++|++ +++++.. + +|+
T Consensus 6 ~~~~i~ld~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~------~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQT----GGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC------D--VAR 73 (371)
T ss_dssp --CCEECCHHHH----TCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS------S--EEE
T ss_pred CCCcEEeccccc----CCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC------C--EEE
Confidence 567899998653 24678999999998775421 1235567789999999 9999842 2 899
Q ss_pred EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-----CCccEEE
Q 021547 115 ITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-----ENTAAIV 189 (311)
Q Consensus 115 ~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~i~ 189 (311)
+|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.....++.+|+++|++.++ +++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~ 152 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKD-AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLAL 152 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEE
T ss_pred EeCChHHHHHHHHHHHhCCC-CEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEE
Confidence 99999999999999999999 99999999999999999999999999983222457899999999887 6899999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++|+||||.+++ +++|.++|+++|+++|+|++|+..... ..+..++ ..+++.|+||.++.++ |+||++
T Consensus 153 ~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~~ 221 (371)
T 2e7j_A 153 ITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMG 221 (371)
T ss_dssp EESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEE
T ss_pred EECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEEE
Confidence 9999999999999 799999999999999999999975421 1222222 3399999999877654 999999
Q ss_pred eeC
Q 021547 270 TND 272 (311)
Q Consensus 270 ~~~ 272 (311)
+++
T Consensus 222 ~~~ 224 (371)
T 2e7j_A 222 MKE 224 (371)
T ss_dssp ECT
T ss_pred Eec
Confidence 865
No 86
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.94 E-value=6.4e-26 Score=206.98 Aligned_cols=230 Identities=12% Similarity=0.068 Sum_probs=173.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SM---FNCY--APMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
+..++||+.|.+ +.+++++.+.+++.+.+.. +. ...| ....+..++|+++++++. ++ +.++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~--~~i~~~ 106 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS--RALLFI 106 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS--EEEEES
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC--cEEEeC
Confidence 567899999874 2356789999999998764 21 1123 444678899999999983 22 345555
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCC
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPC 194 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~ 194 (311)
+|++++..++.++.++| |.|+++.|+|..+...++..|.+++.++. .|+++|++.+++ +++++++++|+
T Consensus 107 sGt~a~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~ 178 (384)
T 1bs0_A 107 SGFAANQAVIAAMMAKE-DRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVF 178 (384)
T ss_dssp CHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBC
T ss_pred CcHHHHHHHHHHhCCCC-cEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 55899999999999999 99999999999999999999999998874 478899887764 36788888999
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
||||.+++ +++|.++|+++|+++|+|++|+.+.++ +.... ..++. ...++++|+||.++.+| ||++++.
T Consensus 179 nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~ 249 (384)
T 1bs0_A 179 SMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSC--WLQKV-KPELLVVTFGKGFGVSG---AAVLCSS 249 (384)
T ss_dssp TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHH--HHTTC-CCSEEEEESSSTTSSCC---EEEEECH
T ss_pred CCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchH--HhcCC-CCcEEEeeccchhhccC---cEEEeCH
Confidence 99999999 899999999999999999999875542 22211 22221 23399999999998777 9999852
Q ss_pred CCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 273 PNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
++++.++... ..+.+++++.|+++.+.|+
T Consensus 250 --------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~ 281 (384)
T 1bs0_A 250 --------TVADYLLQFARHLIYSTSMPPAQAQALRASLA 281 (384)
T ss_dssp --------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHH
Confidence 3666666532 1233678888887666553
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=3.7e-26 Score=207.98 Aligned_cols=230 Identities=17% Similarity=0.111 Sum_probs=174.7
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+.|+.+.. .++++.+.+++.+.+...... .|....+..++|++++++++ +++++|++|+|++
T Consensus 3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGGGEEEESCHH
T ss_pred EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEECCHH
Confidence 55666652 367899999999988642100 02223456889999999993 4667999999999
Q ss_pred HHHHHHHHHHh----cCCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 121 EAVEIILTVIT----RLGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 121 ~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
+++.+++.++. ++| |+|+++.|+|+++...+ +..|.+++.++.+ .++.+|+++|++.++++++++++++|
T Consensus 72 ~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~ 148 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRK-RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDEDTFLVSIMAA 148 (384)
T ss_dssp HHHHHHHHHHHHHTTTTC-CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCTTEEEEEEESB
T ss_pred HHHHHHHHhhhhhccCCC-CEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHhCCCCeEEEEECC
Confidence 99999999998 789 99999999999876655 7789999999875 35679999999999889999999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhC--CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLG--ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~--~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+||||.+++ +++|.++|+++| ++||+|++|+. +.. +..+.. .+..+++.|+||.++.+| +||++++
T Consensus 149 ~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~-~~~~~~---~~~di~~~s~sK~~g~~G--~G~~~~~ 216 (384)
T 1eg5_A 149 NNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKI-PFSLEK---LEVDYASFSAHKFHGPKG--VGITYIR 216 (384)
T ss_dssp CTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTS-CCCCTT---TCCSEEEEEGGGGTSCTT--CEEEEEC
T ss_pred CCCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCc-ccCchh---cCCCEEEecHHHhcCCCc--eEEEEEc
Confidence 999999999 899999999999 99999999983 221 122222 235699999999988888 7999986
Q ss_pred CCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
+.. . +...+... ....++++.++|+++.+.|+
T Consensus 217 ~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 252 (384)
T 1eg5_A 217 KGV-P-----IRPLIHGGGQERGLRSGTQNVPGIVGAARAME 252 (384)
T ss_dssp TTS-C-----CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH
T ss_pred CCC-c-----cccccccCcccccccCCCCChHHHHHHHHHHH
Confidence 531 0 11111111 11245778888988877765
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=1.9e-26 Score=210.98 Aligned_cols=219 Identities=14% Similarity=0.090 Sum_probs=174.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANIL 139 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl 139 (311)
.+.++.+.+++.+.+.. .|++ ...++++.+++++.+.+|. +++ ++++|+|+++++..++.+++++| |+|+
T Consensus 43 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~g-d~Vl 113 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPG-DVVL 113 (393)
T ss_dssp CCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTT-CEEE
T ss_pred CCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCC-CEEE
Confidence 35678888888765532 4544 2567888888888877664 456 89999999999999999999999 9999
Q ss_pred ecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 140 LPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 140 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
++.|+|.+ +...++..|.+++.++.+. ++.+|++.|++.+++ +++++++++|+||||.+++ +++|.++|+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 188 (393)
T 1vjo_A 114 IGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF 188 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred EEcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHc
Confidence 99999998 8899999999999998753 467899999999887 8999999999999999998 89999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----h--
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----L-- 290 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~-- 290 (311)
|+++|+|++|+. +. ....+ ...++.+++.|+||.++.+| |+||+++++ ++++.++.. .
T Consensus 189 ~~~li~Dea~~~---g~-~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~ 252 (393)
T 1vjo_A 189 GTLLLVDTVTSL---GG-VPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANW 252 (393)
T ss_dssp TCEEEEECTTTT---TT-SCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCS
T ss_pred CCEEEEECCccc---cC-cCCcc---cccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCce
Confidence 999999999993 21 11222 22345699999999999888 999999854 366666321 0
Q ss_pred --------------cccc-CCCchhHHHHHhhhh
Q 021547 291 --------------GVRS-GPSTLIQVCEMFLLV 309 (311)
Q Consensus 291 --------------~~~~-~~~~~~q~~~~~~l~ 309 (311)
.... ++++++|+++.+.|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~ 286 (393)
T 1vjo_A 253 YLDMNLLGKYWGSERVYHHTAPINLYYALREALR 286 (393)
T ss_dssp TTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred ecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 1122 678888988887765
No 89
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.94 E-value=1.2e-25 Score=206.49 Aligned_cols=227 Identities=15% Similarity=0.111 Sum_probs=168.5
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
-.++.++|+........+.+.+++...........|. +..+..++++.+++++. . +++++++++++++..
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~ 94 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------G--EAGLATASGISAITT 94 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHH
Confidence 3577787764433444455555544211111122343 33456778888888773 1 256666667799999
Q ss_pred HHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547 126 ILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 126 ~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~ 201 (311)
++.+++++| |+|+++.|.|.++...+ +..|.+++.++.. |++++++.++++++++++++|+||||.++
T Consensus 95 ~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 166 (398)
T 2rfv_A 95 TLLTLCQQG-DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLV 166 (398)
T ss_dssp HHHHHCCTT-CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHhCCC-CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCccc
Confidence 999999999 99999999999887765 8889999988762 89999999998999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~ 280 (311)
+ +++|.++|+++|+++|+|++|+...+.. ++ .+ +.++++.|+||.|+++|+|+ ||+++++
T Consensus 167 ~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~-------- 227 (398)
T 2rfv_A 167 D---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ-------- 227 (398)
T ss_dssp C---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------
T ss_pred C---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------
Confidence 8 9999999999999999999999765431 12 12 35599999999999999999 9998854
Q ss_pred hHHH-HHhhhhc-c-ccCCCchhHHHHHhhhh
Q 021547 281 GIVG-SIKACLG-V-RSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 281 ~~~~-~~~~~~~-~-~~~~~~~~q~~~~~~l~ 309 (311)
++++ .++.... . +.+.+++.|+++.+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (398)
T 2rfv_A 228 EFIDQARFVGLKDITGGCMSPFNAWLTLRGVK 259 (398)
T ss_dssp HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence 3454 5554432 3 45778888988877765
No 90
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=6.1e-26 Score=207.84 Aligned_cols=234 Identities=13% Similarity=0.071 Sum_probs=170.6
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCC--CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM----FNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~----~~~--Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++|+|+.++|. .+..++.+.+++.+.+.... ... |....+..++|+.+++++.. .+.++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~~- 110 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILYS- 110 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEES-
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEEC-
Confidence 3568999999642 34578999999988876411 111 22333468899999998842 2345555
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEe
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~ 191 (311)
+|++++..++.+++++| |.|+++.|+|..+...++..|.+++.++. .|++.+++.+++ ++++++++
T Consensus 111 sGt~a~~~~l~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 182 (399)
T 3tqx_A 111 SCFDANGGLFETLLGPE-DAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATD 182 (399)
T ss_dssp CHHHHHHTTHHHHCCTT-CEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEE
T ss_pred chHHHHHHHHHHhcCCC-CEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 55789999999999999 99999999999999999999999998875 367788887764 78999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+|+||||.+++ +++|.++|+++|+++|+|++|+...++..........+ ...+.++++|+||.++ |++.||+++
T Consensus 183 ~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~ 257 (399)
T 3tqx_A 183 GVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSG 257 (399)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEE
T ss_pred CCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEc
Confidence 99999999999 99999999999999999999974333221111122222 1235699999999987 445599988
Q ss_pred eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++.+.... ..+...+++.++++.+.++
T Consensus 258 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (399)
T 3tqx_A 258 HK--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLE 291 (399)
T ss_dssp CH--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred CH--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHH
Confidence 53 4667766542 1234566676666665554
No 91
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.6e-25 Score=204.10 Aligned_cols=219 Identities=15% Similarity=0.082 Sum_probs=172.2
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
+.++.+.+++.+.+. ..|++ ...++++.+++++.+.+|.+ +++++++|+|+++++..++.+++++| |+|+++
T Consensus 30 ~~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~g-d~vl~~ 101 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF----SHRSK--EYRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKG-GKVLVT 101 (386)
T ss_dssp CCCHHHHHHTTSCCC----CTTSH--HHHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTT-CEEEEE
T ss_pred CCcHHHHHHHhcccc----cccCH--HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCC-CeEEEE
Confidence 557788887765543 24543 23678888888888877765 46789999999999999999999999 999999
Q ss_pred CCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 142 RPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 142 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
.|+|.+ +...++..|.+++.++.+. ++.+|++.|++.+ .++++++++++|+||||.+.+ +++|.++|+++|
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 176 (386)
T 2dr1_A 102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD 176 (386)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence 999998 8889999999999998753 5678999999988 568999999999999999998 899999999999
Q ss_pred CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh----------
Q 021547 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK---------- 287 (311)
Q Consensus 218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~---------- 287 (311)
+++|+|++|+...+. ..+. ..++++++.|+||.++.++ ++||+++++ ++++.++
T Consensus 177 ~~li~D~a~~~~~~~----~~~~---~~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~ 240 (386)
T 2dr1_A 177 KLVFVDAVSAMGGAD----IKFD---KWGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD 240 (386)
T ss_dssp CEEEEECTTTBTTBC----CCTT---TTTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred CeEEEEccccccCcc----cccc---ccCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence 999999999975431 1222 2235699999999988763 399999864 3555542
Q ss_pred ------hh---hccccCCCchhHHHHHhhhh
Q 021547 288 ------AC---LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 288 ------~~---~~~~~~~~~~~q~~~~~~l~ 309 (311)
.. ....+++++++|+++.+.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 271 (386)
T 2dr1_A 241 IPLYVKYLKEKESTPSTPPMPQVFGINVALR 271 (386)
T ss_dssp HHHHHHHHHHHSSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 11 12245678888988877764
No 92
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.94 E-value=3.6e-26 Score=209.59 Aligned_cols=213 Identities=18% Similarity=0.211 Sum_probs=168.9
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNC------YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI 115 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~ 115 (311)
++++++|+.+.+. +.++.+.+++.+.+.... ... |.+..+..++|+++++++... ++++|++
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~ 90 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF 90 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE
Confidence 4578999999853 467899999999886431 111 223456788999999988421 4689999
Q ss_pred eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
|+|+++++.+++.++ +++| |+|+++.|+|.+. ...++..|.+++.++.. .++.+|++.|++.+++++++
T Consensus 91 ~~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 91 VRGTTEGINLVANSWGNSNVRAG-DNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp ESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCCTTEEE
T ss_pred eCChhHHHHHHHHHhhhhcCCCC-CEEEEecccchHHHHHHHHHHHhCCCEEEEEecC--CCCCcCHHHHHHHhccCCeE
Confidence 999999999999999 7899 9999999998753 45577789999999875 35678999999999989999
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 267 (311)
+++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+.. .++++++.|+||.++.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~---~~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQA---LDCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHH---HTCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCC----CCCcccc---cCCCEEEEEchhccCCCC--cEE
Confidence 999999999999999 9999999999999999999998632 1112222 235699999999998888 899
Q ss_pred EEeeCCCCccchhhHHHHHhhh
Q 021547 268 LATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++++. +++++++..
T Consensus 236 ~~~~~--------~~~~~~~~~ 249 (406)
T 1kmj_A 236 LYVKE--------ALLQEMPPW 249 (406)
T ss_dssp EEECH--------HHHHHCCCS
T ss_pred EEEeH--------HHHhhcCCc
Confidence 99853 466666543
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=2.2e-26 Score=210.03 Aligned_cols=205 Identities=18% Similarity=0.095 Sum_probs=163.3
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FN-----CYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~-----~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
+++++|+.+.+ .+.++.+.+++.+.+.... .. .|.. ..+..++|+++++++. +++++|++|+
T Consensus 15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEEES
T ss_pred CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHHHEEEeC
Confidence 46799998863 3567889999988876321 00 2433 3577899999999983 4667999999
Q ss_pred ChHHHHHHHHHHH-hcCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547 118 GCMEAVEIILTVI-TRLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192 (311)
Q Consensus 118 g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 192 (311)
|+++++.+++.++ .++| |+|+++.|+|..+... ++..|.+++.++....+++.+|++.|++.++++++++++++
T Consensus 84 g~t~a~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~ 162 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQG-DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSH 162 (390)
T ss_dssp SHHHHHHHHHHHSCCCTT-CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEES
T ss_pred ChHHHHHHHHhCCCCCCC-CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEec
Confidence 9999999999999 7899 9999999999987643 56789999999875435678999999999988999999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHH----HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 193 PCNPCGNVLTYQHLQKIAETAR----KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~----~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
|+||||.+++ +++|.++|+ ++|+++|+|++|+... ....+ ...+..+++.|+||. ...|.++||+
T Consensus 163 ~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~---~~~~~d~~~~s~~K~-~~~~~g~G~~ 231 (390)
T 1elu_A 163 LLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF---SRLEVDYYAFTGHKW-FAGPAGVGGL 231 (390)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---TTSCCSEEEEESSST-TCCCTTCEEE
T ss_pred cccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---hhcCCCEEEcccccc-ccCCCceEEE
Confidence 9999999999 899999999 9999999999998421 11122 223355999999994 4556779999
Q ss_pred EeeC
Q 021547 269 ATND 272 (311)
Q Consensus 269 ~~~~ 272 (311)
++++
T Consensus 232 ~~~~ 235 (390)
T 1elu_A 232 YIHG 235 (390)
T ss_dssp EECT
T ss_pred EECH
Confidence 9864
No 94
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.94 E-value=3.9e-26 Score=209.84 Aligned_cols=236 Identities=18% Similarity=0.197 Sum_probs=172.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++.++||+.+.+..+.++ .+|.+.+++.+.+..... ..| +.....++++.+++++ | .+++++|+|++
T Consensus 37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~~~gg~ 106 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFFCNSGA 106 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence 4678899998832212223 578999999998864321 122 2223445555555554 3 45899999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHhh
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
+++..++.++.. +|.|+|++.+|+|+++...+...+. ++..++. .|+++|++.
T Consensus 107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 179 (406)
T 4adb_A 107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL 179 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence 999999998865 5548999999999988554444443 2333322 389999999
Q ss_pred cCCCccEEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547 181 ADENTAAIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 181 l~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
+++++++++++ |+||+|.++ +.+++++|.++|++||++||+||+|.++.+.|... .+..++...+++ ++||.+
T Consensus 180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~ 254 (406)
T 4adb_A 180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL 254 (406)
T ss_dssp CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence 99888888888 999999988 99999999999999999999999999877665432 222333333444 679999
Q ss_pred CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ +|+|+||++++. ++++.+... ...++++++++|+++.+.|+
T Consensus 255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (406)
T 4adb_A 255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_dssp G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 8 899999998753 467777665 33467889999999987775
No 95
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=3.4e-25 Score=205.15 Aligned_cols=211 Identities=16% Similarity=0.153 Sum_probs=172.6
Q ss_pred CCCCCee--ecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 42 NDPRPVI--PLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 42 ~~~~~~i--~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.++.+++ +|+.|.|. ++.|+.+.+++.+.+..+ .|.+ ..+..++|++++++++ .+++++|+|
T Consensus 11 ~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~g 75 (424)
T 2po3_A 11 FGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCN 75 (424)
T ss_dssp GTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESC
T ss_pred hcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCC
Confidence 3566665 68888865 667899999999888653 4776 6789999999999994 258999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
+++++.+++.++. +| |+|+++.|+|..+...++..|.+++.+++++ +++.+|+++|++.++++++++++++ |||
T Consensus 76 gt~al~~~l~~l~-~g-d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG 149 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LT-GEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWG 149 (424)
T ss_dssp HHHHHHHHHHHHT-CC-SEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGG
T ss_pred HHHHHHHHHHHcC-CC-CEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCC
Confidence 9999999999985 78 9999999999999999999999999998754 4678999999999988888888754 899
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
...+ +++|.++|+++|++||+|++|+ ++.+++.+ +..+. + +++.||||.++++|.|+||++++++
T Consensus 150 ~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~~---- 215 (424)
T 2po3_A 150 RPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDDA---- 215 (424)
T ss_dssp CCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESCH----
T ss_pred CcCC---HHHHHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCCH----
Confidence 9876 9999999999999999999999 56665532 22222 2 8999999666778899999998643
Q ss_pred chhhHHHHHhhhh
Q 021547 278 QKSGIVGSIKACL 290 (311)
Q Consensus 278 ~~~~~~~~~~~~~ 290 (311)
+++++++...
T Consensus 216 ---~l~~~l~~~~ 225 (424)
T 2po3_A 216 ---DLAARIRALH 225 (424)
T ss_dssp ---HHHHHHHHHH
T ss_pred ---HHHHHHHHHH
Confidence 3667666543
No 96
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.94 E-value=5.7e-26 Score=206.55 Aligned_cols=237 Identities=16% Similarity=0.107 Sum_probs=174.4
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
++..++||+.|.|.. .++ +++.+.+++.+.+... ....|. ..+..++++++++++ | + ++++++|+|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~----g--~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF----W--T-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence 467899999886531 244 7899999999988642 123563 456788888888886 3 2 3789999999
Q ss_pred HHHHHHHHHH---Hh---cCCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHhh
Q 021547 120 MEAVEIILTV---IT---RLGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 120 ~~a~~~~~~~---l~---~~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
++++.+++.+ +. ++|.|+|+++.|+|+.+...+...+.. +..++. .|+++|++.
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 168 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence 9999998875 34 555589999999998876655443322 222221 489999999
Q ss_pred cCCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC
Q 021547 181 ADENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI 259 (311)
Q Consensus 181 l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~ 259 (311)
++++++++++++++||||.+ .+.+++++|.++|+++|+++|+|++|.++.+.+.. ..+..+....+++ |+||.++
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG 244 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc
Confidence 98889999999999999998 56888999999999999999999999976544422 2333333223334 7889987
Q ss_pred CCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 260 VPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+|+|+||+++++ ++++.++.. ...++++++++|+++.+.|+
T Consensus 245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (375)
T 2eh6_A 245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVD 286 (375)
T ss_dssp -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHH
T ss_pred -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 699999999864 356665543 23345678899988877665
No 97
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=3.9e-25 Score=205.08 Aligned_cols=233 Identities=13% Similarity=0.106 Sum_probs=172.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-S-MFNCYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~-~~~~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++|+|+.|++ +++..++.+.+++.+.+.. + ....|....| ..++++.++++++ . +++++++
T Consensus 63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~ 131 (427)
T 2w8t_A 63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS 131 (427)
T ss_dssp TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence 567899999974 2456789999999998864 2 1222333334 4778888888873 1 3566666
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCC
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINP 193 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p 193 (311)
+|++++..++.++.++| |.|+++.|+|..+...++..|.+++.++. .|++.|++.+++ ++++|+++++
T Consensus 132 sGs~a~~~al~~l~~~g-d~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 132 TGYMANLGIISTLAGKG-EYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp CHHHHHHHHHHHHSCTT-CEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred CcHHHHHHHHHHhcCCC-CEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 77789999999999999 99999999999999999999999988863 488999988765 7889999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+||+|.+++ +++|.++|++||+++|+||+|+.+.++.........++ ..+.++++.|+||.++++| ||++++.
T Consensus 204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~ 277 (427)
T 2w8t_A 204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH 277 (427)
T ss_dssp ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence 999999999 99999999999999999999998776421111111122 1234799999999998777 9999853
Q ss_pred CCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547 273 PNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ +++.+... ...+.+.+++.++++.+.|+
T Consensus 278 -~-------l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~ 309 (427)
T 2w8t_A 278 -P-------KFEAVRLACRPYIFTASLPPSVVATATTSIR 309 (427)
T ss_dssp -T-------TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred -H-------HHHHHHHhcccccccCCCCHHHHHHHHHHHH
Confidence 2 44444433 11234566776666555553
No 98
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=3.6e-25 Score=204.46 Aligned_cols=206 Identities=17% Similarity=0.136 Sum_probs=159.4
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----------CCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP----------MFGLPLARRAVAEYLNRDLPYKLSAD 111 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~l~~~~g~~~~~~ 111 (311)
..++++|.|+.+.+ .++++.+.+++.+.+.......++. .....++++.+++++ +.+++
T Consensus 18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~ 86 (423)
T 3lvm_A 18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPR 86 (423)
T ss_dssp --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGG
T ss_pred cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCC
Confidence 35788999998874 3678999999988775111101111 123366777777777 34677
Q ss_pred CEEEeCChHHHHHHHHHHHhc----CCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 112 DIYITLGCMEAVEIILTVITR----LGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
+|++|+|+++|+.+++.++.+ +| |+|+++.++|+++...+ +..|.+++.++... ++.+|++.|++.++++
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKG-KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDD 163 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTC-CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTT
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCC-CEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCC
Confidence 999999999999999998874 79 99999999999987766 55599999998753 5678999999999999
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
++++++++|+||||.+++ +++|.++|+++|++||+|++|+... ....+. ..+..+++.|+||.++.+|
T Consensus 164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~---~~~~di~~~s~sK~~g~~g-- 231 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLS---QLKVDLMSFSGHKIYGPKG-- 231 (423)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTT---TSCCSEEEEESTTTTSCSS--
T ss_pred cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChh---hcCCCEEEechHHhcCCCC--
Confidence 999999999999999999 8889999999999999999987522 111222 2234599999999887666
Q ss_pred eeEEEeeCC
Q 021547 265 FGWLATNDP 273 (311)
Q Consensus 265 ~G~i~~~~~ 273 (311)
+||+++++.
T Consensus 232 ~G~~~~~~~ 240 (423)
T 3lvm_A 232 IGALYVRRK 240 (423)
T ss_dssp CEEEEECBT
T ss_pred eEEEEEecc
Confidence 899998643
No 99
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.93 E-value=1e-25 Score=206.72 Aligned_cols=238 Identities=13% Similarity=0.129 Sum_probs=170.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++..++||+.+....+.++ .+|.+.+++.+.+..... +.. ....+.++.+++.+.+.+| .+++++|+|++++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a 109 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA 109 (397)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred CCCEEEECCccccccccCC-CCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 4678899987721111122 578999999998864321 111 1122445555555555443 5789999999999
Q ss_pred HHHHHHHHhc------CCCCEEEecCCCCcch-HHHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcCC
Q 021547 123 VEIILTVITR------LGAANILLPRPGWPFY-ESFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 123 ~~~~~~~l~~------~g~d~Vl~~~p~~~~~-~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+.+++.++.. +|.+.|++..|+|.+. ...++..|.+ +..++. .|+++|++.+++
T Consensus 110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~ 182 (397)
T 2ord_A 110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE 182 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence 9999998864 5437899999998654 4466777765 555543 289999999988
Q ss_pred CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 184 NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
+++++++++|+||||. +++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++ |+||.++ +|
T Consensus 183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G 257 (397)
T 2ord_A 183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG 257 (397)
T ss_dssp TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence 9999999999999999 999999999999999999999999999987665542 2233333222333 7899988 89
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+|+||+++++. ++ .++.. ...++++++++|+++.+.|+
T Consensus 258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 296 (397)
T 2ord_A 258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIK 296 (397)
T ss_dssp SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999998653 33 33322 23356789999998888765
No 100
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.93 E-value=8.2e-26 Score=209.06 Aligned_cols=245 Identities=14% Similarity=0.071 Sum_probs=174.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.+..++||+.+.+....++ +++.+.+++.+.+..... ..|.+..+..++|+++++++. | . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 4677889987753222122 678999999998864322 146666788999999999983 2 1 347999999999
Q ss_pred HHHHHHHH---HHhcCCCCEEEecCCCCcchH-HHHHHcCcE-------------EEEeeccC---CCCcccCHHHHHhh
Q 021547 121 EAVEIILT---VITRLGAANILLPRPGWPFYE-SFAKRNHIE-------------VRHFDLLP---ERGWEVDLEAVEAL 180 (311)
Q Consensus 121 ~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~-~~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~ 180 (311)
+++.+++. .+.++| +|++.+|+|+++. ..+...|.+ ++.+++.. ..++.+|++.|++.
T Consensus 113 ~a~~~~~~~a~~~~~~~--~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~ 190 (426)
T 1sff_A 113 EAVENAVKIARAATKRS--GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRI 190 (426)
T ss_dssp HHHHHHHHHHHHHHTCC--EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC--eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHH
Confidence 99999988 666655 7999999998754 455555543 55666532 12345789999988
Q ss_pred cC-----CCccEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547 181 AD-----ENTAAIVII-NPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS 253 (311)
Q Consensus 181 l~-----~~~~~i~i~-~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s 253 (311)
++ ++++++++. +++| || ..++.+++++|.++|++||++||+||+|.++.+.+.. ..+..... .+.+.|
T Consensus 191 l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~---~~di~s 265 (426)
T 1sff_A 191 FKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQMGV---APDLTT 265 (426)
T ss_dssp HHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTS---CCSEEE
T ss_pred HHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhhhhcCC---CCCEEE
Confidence 75 345565553 3467 99 7889999999999999999999999999987665532 22222221 233449
Q ss_pred CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|||.|+. |+|+||++++. ++++.+... ...+.++++++|+++.+.|+
T Consensus 266 ~sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 266 FAKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp ECGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred EcccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence 9999987 99999999864 356655543 23456789999999886554
No 101
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=3.9e-25 Score=201.74 Aligned_cols=201 Identities=14% Similarity=0.085 Sum_probs=158.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL------- 133 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~------- 133 (311)
.++++.+.+++.+.+..... .|....+..++++.+.+++.+.+|. ++++|++|+|+++++..++.++..+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHIVSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCC--CCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 34567889999988764321 2222224567777777777766653 5779999999999999999999876
Q ss_pred ------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHH
Q 021547 134 ------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHL 206 (311)
Q Consensus 134 ------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l 206 (311)
| |+|+++.|+|..+...++..|.+++.++.+ .++.+|+++|++.+++ +++++++++|+||||.+.+ +
T Consensus 117 ~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l 190 (397)
T 3f9t_A 117 GLSKNEH-PKIIVPITAHFSFEKGREMMDLEYIYAPIK--EDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---I 190 (397)
T ss_dssp TCCCCSS-CEEEEETTCCTHHHHHHHHHTCEEEEECBC--TTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---H
T ss_pred cccCCCC-eEEEECCcchhHHHHHHHHcCceeEEEeeC--CCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---H
Confidence 8 999999999999999999999999999875 3577999999999988 8999999999999999988 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCCccC--CCC--C----CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 207 QKIAETARKLGILVIADEVYGHLAFG--STP--Y----IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 207 ~~l~~l~~~~~~~li~D~ay~~~~~~--~~~--~----~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
++|.++|++||+++|+|++|+.+.+. +.. . .++ .+.. +..+++.|++|. +++|.|+|+++++++
T Consensus 191 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~ 262 (397)
T 3f9t_A 191 EELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI 262 (397)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG
T ss_pred HHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCH
Confidence 99999999999999999999875432 210 0 011 1111 345889999997 567889999998764
No 102
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.93 E-value=4.1e-25 Score=202.80 Aligned_cols=233 Identities=14% Similarity=0.101 Sum_probs=175.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SMF---NCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
+++.+|+|+.|+|. .+..++.+.+++.+.+.. +.. ..|. ...+..++|+++++++. .+ +.++++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~~ 112 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-DAILYS 112 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-EEEEES
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-cEEEeC
Confidence 46789999999641 223589999999988764 211 1221 14567899999999993 23 455554
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEE
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVI 190 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i 190 (311)
+|++++..++.+++++| |.|+++.|+|..+...++..|.+++.++. .|++++++.+++ +++++++
T Consensus 113 -sGs~a~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~ 183 (401)
T 1fc4_A 113 -SCFDANGGLFETLLGAE-DAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIAT 183 (401)
T ss_dssp -CHHHHHHTTHHHHCCTT-CEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred -ChHHHHHHHHHHHcCCC-CEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEE
Confidence 55779999999999999 99999999999888889999999988863 478888887764 6889999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCcc-CCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeE
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAF-GSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGW 267 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~ 267 (311)
++|+||||.+++ +++|.++|+++|+++|+|++|+ ++.+ ++........+.. +.++++.|+||.| +.+| ||
T Consensus 184 ~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~ 256 (401)
T 1fc4_A 184 DGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GY 256 (401)
T ss_dssp ESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EE
T ss_pred eCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EE
Confidence 999999999999 9999999999999999999996 6653 3433222122222 3469999999998 6565 99
Q ss_pred EEeeCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 268 LATNDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 268 i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
++++. ++++.+.... ..+.++++++|+++.+.|+
T Consensus 257 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (401)
T 1fc4_A 257 TAARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLE 293 (401)
T ss_dssp EEECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred EEcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHH
Confidence 99842 4677766542 1245778899988887664
No 103
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.93 E-value=1.2e-25 Score=210.47 Aligned_cols=228 Identities=18% Similarity=0.142 Sum_probs=170.9
Q ss_pred CCeeecCCC-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 45 RPVIPLGHG-DPAAFPCFRTAAVAEDAIVDS---VRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 45 ~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
.++|+|+.| +| .++.++.+.+++... ........|. ..|.+ +++++++++.+.+|. +++++++|++
T Consensus 89 ~~~i~l~~g~~~----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt 158 (464)
T 1ibj_A 89 TLLVNLDNKFDP----FDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGM 158 (464)
T ss_dssp HHHTCCCCSSCT----TCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHH
T ss_pred CeEEECCCCCCC----CCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHH
Confidence 457888887 54 355555566665432 1112233576 34555 677888888776653 3778888889
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np 196 (311)
+++.+++. ++++| |+|+++.|.|.++... ++..|.+++.++.. |++++++.++++++++++++|+||
T Consensus 159 ~al~~~l~-~~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np 229 (464)
T 1ibj_A 159 AALSAVTH-LIKNG-EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP 229 (464)
T ss_dssp HHHHHHHT-TSCTT-CEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred HHHHHHHH-HhCCC-CEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence 99998876 77899 9999999999988753 56789999988752 889999999999999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCC
Q 021547 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNG 275 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~ 275 (311)
||.+++ +++|.++|+++|+++|+|++|.... ...++. .+++|++.|+||.|+.+ |+|+||++++++
T Consensus 230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~-- 296 (464)
T 1ibj_A 230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGE-- 296 (464)
T ss_dssp TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECSH--
T ss_pred CCEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh----cCCEEEEECCcccccCCCCCcEEEEEEChH--
Confidence 999998 9999999999999999999997521 111222 23569999999998765 899999998642
Q ss_pred ccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 276 VLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 276 ~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
++++.++.... ...+.+++.|+++.+.++
T Consensus 297 -----~l~~~l~~~~~~~g~~~~~~~~~a~~~al~ 326 (464)
T 1ibj_A 297 -----KLAKEVYFLQNSEGSGLAPFDCWLCLRGIK 326 (464)
T ss_dssp -----HHHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHhcCCCCCHHHHHHHHhchh
Confidence 36677766543 345678888888766654
No 104
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=1.8e-24 Score=199.23 Aligned_cols=204 Identities=13% Similarity=0.140 Sum_probs=158.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC----CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNC----YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~----Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
+++.++||+.+++ ..++.+|.+.+++.+.+.... ... |.......++++++++++.. +..+++
T Consensus 57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGF--------DECLLS 125 (409)
T ss_dssp CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTC--------SEEEEE
T ss_pred CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CeEEEe
Confidence 4678999988764 356778999999999987521 111 22334567888888888832 235556
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC
Q 021547 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN 195 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n 195 (311)
+++++++..++.+++++| |.|+++.|+|..+...++..|.+++.++. .|+++|++.+++ +++++++++|+|
T Consensus 126 ~sGt~a~~~~l~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~n 197 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPN-TNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYS 197 (409)
T ss_dssp SCHHHHHHHHHHHHCCTT-CEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCT
T ss_pred cchHHHHHHHHHHhcCCC-CEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCC
Confidence 666899999999999999 99999999999999999999999988764 489999998875 589999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|||.+++ +++|.++|++||++||+||+|....++ +......... .....|++.|+||.|+++| ||++++.
T Consensus 198 ptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~-~~~~di~~~s~sK~~~~~g---g~v~~~~ 269 (409)
T 3kki_A 198 TLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRA---GAIWCNN 269 (409)
T ss_dssp TTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTC-GGGCSEEEEESSSTTCSSC---EEEEESS
T ss_pred CCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCC-CCCCCEEEeecchhhCCCc---eEEEECH
Confidence 9999999 999999999999999999999875443 3222211111 1224589999999998775 9988754
No 105
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=8.1e-25 Score=200.88 Aligned_cols=233 Identities=15% Similarity=0.095 Sum_probs=168.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SM-----FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~ 117 (311)
++++++|..++.. .++.+|.+.+++.+.+.. .. ...|....+..++|+++++++. .+++|++|+
T Consensus 45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESC
T ss_pred CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECC
Confidence 3456888876531 344577899999998864 11 1235555678999999999984 246788877
Q ss_pred ChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547 118 GCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII 191 (311)
Q Consensus 118 g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~ 191 (311)
|++ ++..++..+. .+| |.|+++.|+|..+...++..|.+++.++.. |++++++.++ +++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~ 185 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPG-LIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFE 185 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTT-CEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred cHH-HHHHHHHHHhcCCCC-CEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEe
Confidence 766 7777777664 489 999999999999999999999999988752 6788887765 578999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+|+||||.+++ +++|.++|++||+++|+|++|+...++......+..... ...+++++|+||.|+++| ||+++
T Consensus 186 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~ 259 (401)
T 2bwn_A 186 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAA 259 (401)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEE
T ss_pred cCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEec
Confidence 99999999999 899999999999999999999954443211111111111 123699999999999888 99987
Q ss_pred eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++.++... ....+.++++|+++.+.++
T Consensus 260 ~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~ 293 (401)
T 2bwn_A 260 SA--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIA 293 (401)
T ss_dssp CH--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHH
T ss_pred CH--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHH
Confidence 42 3666655431 2223345577766655543
No 106
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.93 E-value=1.6e-24 Score=197.67 Aligned_cols=220 Identities=14% Similarity=0.024 Sum_probs=165.6
Q ss_pred CC-CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 44 PR-PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 44 ~~-~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+. +++|++.+.+ ..++++.+.+++. .|.. ...+++.+++++.+.+|.. .++++++++|++++
T Consensus 26 g~~~v~~~~~~~~----~~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSG----GFLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCC----CCCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCC----CCCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 7899998874 3678899998885 1211 1345566666665555533 34789999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE-EEEeCCCCCCc
Q 021547 123 VEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA-IVIINPCNPCG 198 (311)
Q Consensus 123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-i~i~~p~nptG 198 (311)
+..++.++ +| |+|+++.|+|+++.. .++..|.+++.+ .|++++++. ++++++ +++++|+||||
T Consensus 89 ~~~~~~~~--~g-d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG 155 (374)
T 2aeu_A 89 ILATILAL--KP-KKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKV 155 (374)
T ss_dssp HHHHHHHH--CC-SEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCB
T ss_pred HHHHHHhC--CC-CEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCC
Confidence 99999988 89 999999998876433 678889988877 278999988 778999 99999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
. +.+++++|.++|++||+++|+|++|+.+.. ......++ .+ +..++++|+||. ++|+|+||++++.
T Consensus 156 ~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~---~~di~~~S~sK~--l~g~~~G~~~~~~----- 222 (374)
T 2aeu_A 156 I--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KL---GADLVVTSTDKL--MEGPRGGLLAGKK----- 222 (374)
T ss_dssp C--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HH---TCSEEEEETTSS--SSSCSCEEEEEEH-----
T ss_pred C--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-cc---CCcEEEecCccc--ccCcceEEEEECH-----
Confidence 7 778899999999999999999999987531 01011011 11 234899999998 4578999998853
Q ss_pred chhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+++++++.... ...+++++.|+++.+.|+
T Consensus 223 ---~~~~~l~~~~~~~~~~~~~~~~~a~~~al~ 252 (374)
T 2aeu_A 223 ---ELVDKIYIEGTKFGLEAQPPLLAGIYRALK 252 (374)
T ss_dssp ---HHHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhhccccCCCCHHHHHHHHHHHH
Confidence 47777776543 344678888988887765
No 107
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.93 E-value=1.5e-24 Score=195.53 Aligned_cols=208 Identities=13% Similarity=0.056 Sum_probs=163.6
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+.+|+|+.+.+ .++++.+.+++.+.+. .|....|..++++.+++++.+.+| .++++|++|+|+++++
T Consensus 12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 467899999763 2578999999998875 466666778889999999888776 4677899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC-------ccEEEEeCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN-------TAAIVIINPC 194 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-------~~~i~i~~p~ 194 (311)
..++.+++++| |+|+++.|+|..+.. .++..|.+++.++.. ++.+|+++|++.++++ ++++++++|
T Consensus 80 ~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~- 154 (359)
T 1svv_A 80 LIACSLALRPW-EAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT- 154 (359)
T ss_dssp HHHHHHHCCTT-EEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-
T ss_pred HHHHHHHhCCC-CEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-
Confidence 99999999999 999999999998877 588899999999863 6789999999988765 889999998
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
||||.+++.+++++|.++|++||+++|+|++|..+.++..+. ....+. .....+++.|.+|. +.+ .++|+++++
T Consensus 155 ~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~ 229 (359)
T 1svv_A 155 TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILN 229 (359)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECS
T ss_pred CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEc
Confidence 799999999999999999999999999999995432221111 111100 00122788899997 443 567888874
No 108
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.93 E-value=1.1e-24 Score=199.41 Aligned_cols=238 Identities=18% Similarity=0.114 Sum_probs=171.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+++.++||+.+.+....+. .+|.+.+++.+.+..... ..+.+.....++++.+++++ ..+++++|+|+++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~ 104 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE 104 (392)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred CCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence 4678899987743211111 579999999998864321 11122345567777777776 2679999999999
Q ss_pred HHHHHHHHHhcC---------CCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHh
Q 021547 122 AVEIILTVITRL---------GAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 122 a~~~~~~~l~~~---------g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 179 (311)
++..++..+..+ |.|+|++..|+|.++...+...+.. +..++. .|+++|++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999987654 2289999999998765555444322 333332 28999999
Q ss_pred hcCCCccEEEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547 180 LADENTAAIVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW 258 (311)
Q Consensus 180 ~l~~~~~~i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 258 (311)
.++++++++++++|+||||.+++.++ +++|.++|++||+++|+||+|.++.+.|... .........+++ ++||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence 99989999999999999999996666 9999999999999999999998776665432 223223223343 778985
Q ss_pred CCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 259 IVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 259 ~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ +| +|+||++++. ++++.+... ...++++++++|+++.+.|+
T Consensus 254 ~-gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (392)
T 3ruy_A 254 G-GGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALE 297 (392)
T ss_dssp G-TTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred h-CChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 4 36 9999999853 366666654 33457889999999888775
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=4.3e-25 Score=198.70 Aligned_cols=232 Identities=16% Similarity=0.166 Sum_probs=162.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+..+|+|+.+... .+++.+++++.+.... ...|.+..+..++|++++++++ .+++++++|+++++
T Consensus 2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence 4567899999732 3567888888654321 1257777788999999999994 24678888889999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCC
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPC 194 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~ 194 (311)
.+++.+++++| |+|+++.|+|.... ..++..|.+++.+ .. .++.+|++++++.+++ +++++++++|+
T Consensus 67 ~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~ 142 (347)
T 1jg8_A 67 QVSIMAHTQRG-DEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTH 142 (347)
T ss_dssp HHHHHHHCCTT-CEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSB
T ss_pred HHHHHHhcCCC-CEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccc
Confidence 99999999999 99999999997532 2577789998887 32 3456899999998875 68999999999
Q ss_pred CCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccCC--ccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 195 NPC-GNVLTYQHLQKIAETARKLGILVIADEVYGHL--AFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 195 npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
||| |.+++.+++++|+++|+++|+++|+|++|... .+.+.....+.. .. . .++.|+||.++++ +|++++.
T Consensus 143 npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~-d-~~~~s~sK~l~~~---~G~~~~~ 215 (347)
T 1jg8_A 143 NRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG--YA-D-SVMFCLSKGLCAP---VGSVVVG 215 (347)
T ss_dssp TTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH--TC-S-EEEEESSSTTCCS---SCEEEEE
T ss_pred cccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc--cc-c-EEEEecccccCCC---ceEEEEc
Confidence 999 99999999999999999999999999987531 122222222211 11 1 3445899998654 6865443
Q ss_pred CCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhh
Q 021547 272 DPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l 308 (311)
++ +++++++... +.....+.+.++++...+
T Consensus 216 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (347)
T 1jg8_A 216 DR-------DFIERARKARKMLGGGMRQAGVLAAAGIIAL 248 (347)
T ss_dssp CH-------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHH
T ss_pred CH-------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHH
Confidence 32 3666655432 212223444455444443
No 110
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=2.1e-24 Score=199.99 Aligned_cols=202 Identities=16% Similarity=0.161 Sum_probs=144.1
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---------GLPLARRAVAEYLNRDLPYKLSADDIY 114 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~l~~~~g~~~~~~~v~ 114 (311)
..+++.|+.+.+. ++++.+.+++.+.+... ..|+... ...++|++++++++ +++++|+
T Consensus 16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~ 82 (432)
T 3a9z_A 16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMIG------GKPQDII 82 (432)
T ss_dssp --CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEE
T ss_pred CCCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHcC------CCcCeEE
Confidence 3567888888742 67899999999988642 1333211 13588899998883 4667999
Q ss_pred EeCChHHHHHHHHHHHh--------cCCCCEEEecCCCCcch-----------------HHHHHHcCcEEEEeeccCCCC
Q 021547 115 ITLGCMEAVEIILTVIT--------RLGAANILLPRPGWPFY-----------------ESFAKRNHIEVRHFDLLPERG 169 (311)
Q Consensus 115 ~t~g~~~a~~~~~~~l~--------~~g~d~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~ 169 (311)
+|+|+++++.+++.+++ ++| |+|+++.|+|..+ ...++..|.+++.+++.. .+
T Consensus 83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~g-d~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~ 160 (432)
T 3a9z_A 83 FTSGGTESNNLVIHSTVRCFHEQQTLQG-RTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VN 160 (432)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHHC-------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TT
T ss_pred EeCChHHHHHHHHHHHHhhhhhccccCC-ccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-cc
Confidence 99999999999999986 589 9999999999865 344556799999998753 24
Q ss_pred cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC----------CEEEEeccccCCccCCCCCCcc
Q 021547 170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG----------ILVIADEVYGHLAFGSTPYIPM 239 (311)
Q Consensus 170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~----------~~li~D~ay~~~~~~~~~~~~~ 239 (311)
+.+|++.|++.++++++++++++|+||||.+++ +++|.++|++++ +++|+|++|+... ....+
T Consensus 161 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~ 233 (432)
T 3a9z_A 161 GQVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDV 233 (432)
T ss_dssp SSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCH
T ss_pred CCcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccCh
Confidence 578999999999989999999999999999999 678899999999 9999999997632 22222
Q ss_pred cccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
.... ..+++.|+||.+ |.|+||+++++.
T Consensus 234 ~~~~---~d~~~~s~~K~~---g~~~G~~~~~~~ 261 (432)
T 3a9z_A 234 EDLG---VDFLTIVGHKFY---GPRIGALYVRGV 261 (432)
T ss_dssp HHHC---CSEEEEEGGGTT---CCSCEEEEETTB
T ss_pred hhcC---CCEEEEehhHhc---CCcceEEEEccc
Confidence 2222 226789999986 457999998653
No 111
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.4e-24 Score=199.37 Aligned_cols=210 Identities=13% Similarity=0.101 Sum_probs=161.5
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYA----PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
+.+.|+.+.+. ++++.+.+++.+.+..... ..|. ...+..++|++++++++ +++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN------ADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCC
Confidence 47888887642 5688999999988864211 1232 13456788899999883 45679999999
Q ss_pred hHHHHHHHHHHH---hcCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547 119 CMEAVEIILTVI---TRLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII 191 (311)
Q Consensus 119 ~~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 191 (311)
+++++.+++.++ +++| |+|+++.|+|..+...+.. .|.+++.+++.+ .++.+|+++|++.+++++++++++
T Consensus 95 ~t~al~~~~~~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~ 172 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLG-YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVN 172 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTT-CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEE
T ss_pred hHHHHHHHHHHHhhccCCC-CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEe
Confidence 999999999988 6899 9999999999976544433 799999998753 346789999999999899999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee-EEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG-WLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~i~~ 270 (311)
+|+||||.+++ +++|.++|+++|+++|+|++|+.. .....+..+ +..+++.|+||.++ ++ +| |+++
T Consensus 173 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~---~~d~~~~s~~K~~g-~~--~G~~~~~ 239 (406)
T 3cai_A 173 SASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP----YRLLDIRET---DADVVTVNAHAWGG-PP--IGAMVFR 239 (406)
T ss_dssp SBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT----TCCCCHHHH---CCSEEEEEGGGGTS-CS--CEEEEES
T ss_pred CCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCCCchhc---CCCEEEeehhhhcC-CC--cCeEEEE
Confidence 99999999999 899999999999999999999842 111222222 24588999999864 44 89 9887
Q ss_pred eCCCCccchhhHHHHHhhh
Q 021547 271 NDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~ 289 (311)
++ +++++++..
T Consensus 240 ~~--------~~~~~l~~~ 250 (406)
T 3cai_A 240 DP--------SVMNSFGSV 250 (406)
T ss_dssp CH--------HHHHTSCCC
T ss_pred eh--------HHHhhcCCc
Confidence 53 355555543
No 112
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=5.4e-24 Score=194.56 Aligned_cols=185 Identities=17% Similarity=0.209 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP 143 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p 143 (311)
+.+.+++.+.+..+.+ .|.+..+..++|++++++++. . +.|++++| ++++.+++.++ +++| |+|+++.|
T Consensus 17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~al~~~l~~l~~~~g-d~Vi~~~~ 86 (388)
T 1b9h_A 17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA------A-HALAVTNG-THALELALQVMGVGPG-TEVIVPAF 86 (388)
T ss_dssp HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC------S-EEEEESCH-HHHHHHHHHHTTCCTT-CEEEEESS
T ss_pred HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC------C-eEEEeCCH-HHHHHHHHHHcCCCCc-CEEEECCC
Confidence 8999999999876433 566677899999999999943 2 45666665 89999999999 8899 99999999
Q ss_pred CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
+|..+...++..|.+++.+++++ +++.+|++.|++.+++++++++ |+||||.+.+ +++|.++|+++|++||+|
T Consensus 87 ~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D 159 (388)
T 1b9h_A 87 TFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQD 159 (388)
T ss_dssp SCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred ccHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEe
Confidence 99999999999999999998754 3578999999999988877766 8999999988 899999999999999999
Q ss_pred ccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 224 EVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 224 ~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
++|+. ..+.+.. +..+. ++.+.||||.++++|.|+||+++++.
T Consensus 160 ~a~~~g~~~~~~~---~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 160 AAHAHGARWQGKR---VGELD----SIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp CTTCTTCEETTEE---GGGSS----SCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred cchhcCCccCCee---ccccc----ceEEEEccCCCcccCCCeEEEEECCH
Confidence 99985 4443322 22222 48889999777777889999998654
No 113
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.92 E-value=2.3e-24 Score=199.38 Aligned_cols=249 Identities=15% Similarity=0.104 Sum_probs=164.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.+..++||+.+.+....+.+.+|.+.+++.+.+.... .|....+..+.+..+++.+.+.+|... +++|++|+|++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea 116 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA 116 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence 4677889988864322122227999999999986432 233222333455555566655555443 6799999999999
Q ss_pred HHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC-------------cEEEEeeccCCC--Ccc------------cC
Q 021547 123 VEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH-------------IEVRHFDLLPER--GWE------------VD 173 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~d 173 (311)
+..+++++.. +| |+|++..|+|+++...+. ..| .+++.++..... .++ +|
T Consensus 117 ~~~ai~~~~~~~~-~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~ 195 (419)
T 2eo5_A 117 IEASIKVVKNTGR-KYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRV 195 (419)
T ss_dssp HHHHHHHHHTTSC-CEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHH
Confidence 9999988754 47 999999999986543322 211 245666553210 112 46
Q ss_pred HHHHH-hhcCC----CccEEEEeCCC-CCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 174 LEAVE-ALADE----NTAAIVIINPC-NPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 174 ~~~l~-~~l~~----~~~~i~i~~p~-nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
++.|+ +.+++ +...+++++|+ ||||. .++.+++++|.++|++||+++|+||+|.++.+.|.. ..+.......
T Consensus 196 ~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~ 274 (419)
T 2eo5_A 196 IEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVP 274 (419)
T ss_dssp HHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCC
T ss_pred HHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCC
Confidence 78898 87753 23445666775 67896 678888999999999999999999999987665532 2222222233
Q ss_pred CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ ||||.|+. | +|+||++++.. ++ .+......+++.++++|+++.+.|+
T Consensus 275 d~~---t~sK~~~~-G~~riG~~~~~~~--------~~-~~~~~~~~t~~~n~~~~~aa~aal~ 325 (419)
T 2eo5_A 275 DVI---TLAKALGG-GIMPIGATIFRKD--------LD-FKPGMHSNTFGGNALACAIGSKVID 325 (419)
T ss_dssp SEE---EECGGGGT-TTSCCEEEEEEGG--------GC-CC------CCCCCHHHHHHHHHHHH
T ss_pred CEE---EecccccC-CccceEEEEEchH--------hh-cCCcccCCCCCCCHHHHHHHHHHHH
Confidence 433 89999985 9 99999998652 33 3321333466789999999888775
No 114
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=1.6e-24 Score=199.15 Aligned_cols=224 Identities=17% Similarity=0.150 Sum_probs=174.8
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
.++|+|+.|.|. + ++.+.+++.+.+... .|.+..+..++|+++++++.. +++++++|+++++.
T Consensus 30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~~--------~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCET--------DHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTTS--------SEEEEESCHHHHHH
T ss_pred CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHCC--------CeEEEecCHHHHHH
Confidence 478899988743 2 388999999888653 576667889999999999842 26778888899999
Q ss_pred HHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 125 IILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
.++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++ ++||||...+
T Consensus 93 ~~l~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~- 166 (399)
T 2oga_A 93 LALRGLGIGPG-DEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD- 166 (399)
T ss_dssp HHHHHTTCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHhCCCCc-CEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC-
Confidence 999999 8899 9999999999999999999999999998753 3578999999999988877766 5789999988
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchh
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+++|.++|+++|+++|+|++|+.+ .+++.. +..+ ..+++.|+ ||.++.+| |+||++++++
T Consensus 167 --l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~----~di~~~S~~~sK~~~~~G-~~g~~~~~~~------- 229 (399)
T 2oga_A 167 --MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAG----SSVAAFSFYPGKNLGCFG-DGGAVVTGDP------- 229 (399)
T ss_dssp --HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCT----TCEEEEECCTTSSSCCSS-CCEEEEESCH-------
T ss_pred --HHHHHHHHHHcCCEEEEECcccccCccCCee---cccc----cCEEEEeCCCCccCCcCC-ceEEEEeCCH-------
Confidence 899999999999999999999864 333322 1111 13888898 79998889 9999998643
Q ss_pred hHHHHHhhhhcc-------------ccCCCchhHHHHHhhh
Q 021547 281 GIVGSIKACLGV-------------RSGPSTLIQVCEMFLL 308 (311)
Q Consensus 281 ~~~~~~~~~~~~-------------~~~~~~~~q~~~~~~l 308 (311)
+++++++..... ....+++.++++.+.+
T Consensus 230 ~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l 270 (399)
T 2oga_A 230 ELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL 270 (399)
T ss_dssp HHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHH
Confidence 366666654321 1244666666655544
No 115
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.92 E-value=1.8e-24 Score=200.61 Aligned_cols=249 Identities=14% Similarity=0.087 Sum_probs=165.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.+.+....+. .+|.+.+++.+.+... ..|....+..+.++++++++.+.++ ...++|++|+|++++
T Consensus 27 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGH-GRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA 101 (430)
T ss_dssp TSCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccCC-CCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 5788999998732212122 3899999999988753 2344445666778888888877665 355799999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcE---------------EEEeeccCC-CCcccCHHHHHh
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIE---------------VRHFDLLPE-RGWEVDLEAVEA 179 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~d~~~l~~ 179 (311)
+..++++++. ++.+.|++..|+|+++...+...+.. +..++.... .....|++.|++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 9999998874 22289999999999876554443332 112221100 001235588888
Q ss_pred hcCC---CccEEEEeCC-CC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEe
Q 021547 180 LADE---NTAAIVIINP-CN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLG 252 (311)
Q Consensus 180 ~l~~---~~~~i~i~~p-~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~ 252 (311)
.++. +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.|. ...+..+ ....+++
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~~~~~~~di~--- 257 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSRWSGVTPDIA--- 257 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTTCCCSEE---
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhhhcCCCCcEE---
Confidence 7762 4445555655 66 8887 66888899999999999999999999998876654 2233333 2222333
Q ss_pred cCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-----hhccccCCCchhHHHHHhhhh
Q 021547 253 SISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-----CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 253 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+|||.++. | +|+||++++. ++++.+.. ....++++++++|+++.+.|+
T Consensus 258 t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 258 VLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp EECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred EEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 68999875 9 9999999843 47888775 234567889999999888775
No 116
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=1.7e-24 Score=197.98 Aligned_cols=207 Identities=14% Similarity=0.089 Sum_probs=159.9
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~ 119 (311)
.....++++.|. +++++.+.+++.+.+.. .|.+ ..+..++|++++++++ .+++ +|++|+|+
T Consensus 16 ~~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~ 79 (393)
T 2huf_A 16 VTPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASG 79 (393)
T ss_dssp CCCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCH
T ss_pred CCCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcH
Confidence 345667777774 46788898888766542 2322 2456788888888883 3444 79999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNP 196 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~np 196 (311)
++++.+++.+++++| |+|+++.|+|.++ ...++..|.+++.+++.. ++.+|++.|++.+++ +++++++++|+||
T Consensus 80 t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~np 156 (393)
T 2huf_A 80 HGGMEATLCNLLEDG-DVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSS 156 (393)
T ss_dssp HHHHHHHHHHHCCTT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHHHHHHHHhCCC-CEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCC
Confidence 999999999999999 9999999999874 345567899999998753 457899999999887 8999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc-CCCCcceeeEEEeeCCCC
Q 021547 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR-WIVPGWRFGWLATNDPNG 275 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~-~~~~G~r~G~i~~~~~~~ 275 (311)
||..++ +++|.++|+++|+++|+|++|... .....+. ..++.+++.|+||+ ++.+|+ ||++++.
T Consensus 157 tG~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~~~---~~~~d~~~~s~sK~l~g~~G~--G~~~~~~--- 221 (393)
T 2huf_A 157 TGVLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMFMD---RWEIDAMYTGSQKVLGAPPGI--TPVSFSH--- 221 (393)
T ss_dssp TTEECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCTT---TTTCSEEECCSSSTTCCCSSC--EEEEECH---
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcchh---hcCccEEEECCCcccccCCCe--EEEEECH---
Confidence 999999 899999999999999999998642 1111222 22356899999997 456776 9999853
Q ss_pred ccchhhHHHHHhh
Q 021547 276 VLQKSGIVGSIKA 288 (311)
Q Consensus 276 ~~~~~~~~~~~~~ 288 (311)
+++++++.
T Consensus 222 -----~~~~~~~~ 229 (393)
T 2huf_A 222 -----RAVERYKR 229 (393)
T ss_dssp -----HHHHHHHT
T ss_pred -----HHHHHHhh
Confidence 36666654
No 117
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.92 E-value=2.1e-24 Score=197.24 Aligned_cols=206 Identities=13% Similarity=0.050 Sum_probs=154.7
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
+.+.|+.+.+ .++++.+.+++.+.+.. ...|....+..++|++++++++ .+++++++|+|+++++.+
T Consensus 8 ~~~yl~~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGP-----VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAMR------LSNKPVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSC-----CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHTT------CSSCCEEESSCTHHHHHH
T ss_pred CcceeecCCC-----cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCCchHHHHH
Confidence 3455666553 36678898888776542 1112222346778888888873 356899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCccEEEEeCCCCCCccCC
Q 021547 126 ILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENTAAIVIINPCNPCGNVL 201 (311)
Q Consensus 126 ~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~i~i~~p~nptG~~~ 201 (311)
++.+++++| |+|+++.|+|+++ ...++..|.+++.++++. ++.+|+++|++.+ .++++++++++|+||||..+
T Consensus 75 ~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 151 (392)
T 2z9v_A 75 AAASLISPD-DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTIN 151 (392)
T ss_dssp HHHHHCCTT-CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEEC
T ss_pred HHHHhcCCC-CEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceec
Confidence 999999999 9999999999875 345566899999998753 3468999999988 45789999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchh
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKS 280 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~ 280 (311)
+ +++|.++|+++|+++|+|++|+... ....+..+ +..+++.|+||++ +.+| +||+++++
T Consensus 152 ~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~-------- 211 (392)
T 2z9v_A 152 P---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE-------- 211 (392)
T ss_dssp C---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------
T ss_pred c---HHHHHHHHHHcCCeEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEECH--------
Confidence 9 8899999999999999999998421 11122222 2458999999964 3455 49999853
Q ss_pred hHHHHHh
Q 021547 281 GIVGSIK 287 (311)
Q Consensus 281 ~~~~~~~ 287 (311)
+++++++
T Consensus 212 ~~~~~l~ 218 (392)
T 2z9v_A 212 RAWAKMK 218 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 3566664
No 118
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.92 E-value=6.2e-24 Score=193.22 Aligned_cols=190 Identities=17% Similarity=0.117 Sum_probs=150.1
Q ss_pred CCcHHHHHHHHHHHhcCC---CCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---
Q 021547 62 RTAAVAEDAIVDSVRSSM---FNCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--- 131 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~---~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--- 131 (311)
++++.+++++.+.+.... ...|.. ..+..++|++++++++ .+++++++|+|+++++.+++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~l~~~~ 84 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGGTVVFTSGATEANNLAIIGYAMRN 84 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence 678999999999886411 101332 1245678888888873 356799999999999999999998
Q ss_pred -cCCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547 132 -RLGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 132 -~~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
++| |+|+++.|+|+.+...+.. .|++++.++++ .++.+|+++|++.++++++++++++|+||||.+++ ++
T Consensus 85 ~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~ 158 (382)
T 4eb5_A 85 ARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE 158 (382)
T ss_dssp GGGC-CEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred cCCC-CEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence 899 9999999999988666543 69999999875 35678999999999888999999999999999999 88
Q ss_pred HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+|.++|+++|++ |+|++|+. +.....+..+ +..+++.|+||.++.+| +||+++++.
T Consensus 159 ~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~ 214 (382)
T 4eb5_A 159 EISEVLAGKAAL-HIDATASV----GQIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE 214 (382)
T ss_dssp HHHHHHTTSSEE-EEECTTTB----TTBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETT
T ss_pred HHHHHHHHCCCE-EEEcchhc----CCcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccc
Confidence 999999999999 99999983 1111122222 24589999999977666 799988764
No 119
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.92 E-value=6.6e-24 Score=197.29 Aligned_cols=246 Identities=15% Similarity=0.054 Sum_probs=171.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.+.+....+. .+|.+.+++.+.+... ..|....+..++++.+++++.+.++.+. .+++++|+|++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~ggsea 116 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWFGHSGSDA 116 (439)
T ss_dssp TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEEeCCHHHH
Confidence 4788999999976432222 7899999999998754 2465556777888888888888665332 1699999999999
Q ss_pred HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcE-E--------------EEeeccCCCCccc-----CHHHHHhh
Q 021547 123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIE-V--------------RHFDLLPERGWEV-----DLEAVEAL 180 (311)
Q Consensus 123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~~ 180 (311)
+..++.++. .++ +.|++..+.|+++...+...+.. . ..++.. ..+.. |++.|++.
T Consensus 117 ~~~al~~~~~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~ 193 (439)
T 3dxv_A 117 NEAAYRAIVKATGR-SGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK 193 (439)
T ss_dssp HHHHHHHHHHHHSC-CEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence 999998863 355 78888888887655444333221 1 112211 11111 68999998
Q ss_pred c----CCCccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 181 A----DENTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 181 l----~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
+ .++++++++..++|++|.+.+ .+.+++|.++|++||++||+||+|.++.+.|.. ..+..+....+++ |+|
T Consensus 194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s 269 (439)
T 3dxv_A 194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG 269 (439)
T ss_dssp HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence 8 456677777777788888665 445999999999999999999999976555532 2333333233333 999
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++ +|+|+||++++. ++++.+... ...++ +++++|+++.+.|+
T Consensus 270 K~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~ 314 (439)
T 3dxv_A 270 KGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLE 314 (439)
T ss_dssp GGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred chhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence 9998 599999999853 366666654 23456 89999988887765
No 120
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.92 E-value=5.2e-24 Score=197.12 Aligned_cols=239 Identities=14% Similarity=0.085 Sum_probs=168.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.|......+. .+|.+.+++.+++.... .+.. .+..++++.+++.+.+.+| .++|++|+|+++|
T Consensus 55 ~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA 126 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA 126 (420)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence 4778899987721111122 67899999999986432 1211 1223456666666665444 4789999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchH-HHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcC
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYE-SFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
+++++.++.. +|.++|++..|+|.++. ......|.+ +..++. .|+++|++.++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~ 199 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD 199 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence 9999998875 67349999999998764 344445543 344432 28999999998
Q ss_pred CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
++++++++++++|++|. .++.+++++|.++|++||+++|+||+|.++.+.|..+ .+..+....+++ |+||.++ +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence 88899888888888884 6999999999999999999999999998876655432 222222223444 7899988 8
Q ss_pred cceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+|+||+++++ ++++.++.. ...+++.++++|+++.+.|+
T Consensus 275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 315 (420)
T 2pb2_A 275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFD 315 (420)
T ss_dssp TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHH
T ss_pred CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHH
Confidence 99999999854 355555442 23456789999998887764
No 121
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.92 E-value=2.9e-24 Score=196.76 Aligned_cols=237 Identities=17% Similarity=0.158 Sum_probs=165.5
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.+..++||+.+.+.. .++ +++.+.+++.+.+..... ..| +.....++++.+++++ + ..+++|++|+|+
T Consensus 43 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg 113 (395)
T 1vef_A 43 EGNEYIDCVGGYGVA--NLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSG 113 (395)
T ss_dssp TSCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSH
T ss_pred CCCEEEEccCccccc--cCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcH
Confidence 356788998874321 132 789999999998864321 123 2233445555555554 3 356899999999
Q ss_pred HHHHHHHHHHHh--cCCCCEEEecCCCCcc-hHHHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcCCC
Q 021547 120 MEAVEIILTVIT--RLGAANILLPRPGWPF-YESFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALADEN 184 (311)
Q Consensus 120 ~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~-~~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~ 184 (311)
++++.+++.++. .+| |.|++..|+|++ +...+...|.+ +..++. .|+++|++.++++
T Consensus 114 ~~a~~~al~~~~~~~~~-~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~ 185 (395)
T 1vef_A 114 TEANEAALKFARAHTGR-KKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEE 185 (395)
T ss_dssp HHHHHHHHHHHHHHHSC-CEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHhCC-CeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-------CcHHHHHHHhccC
Confidence 999999998874 578 899999999865 44456666654 222221 4899999999888
Q ss_pred ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+++++++.++||||..+ +.+++++|.++|++||++||+|++|.++.+.+... .+.......+++ |+||.++. |+
T Consensus 186 ~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~ 260 (395)
T 1vef_A 186 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GV 260 (395)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TS
T ss_pred EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CC
Confidence 88877666678999764 78889999999999999999999999765444322 222222222333 88999986 99
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+||+++++ ++++.++.. ...+.++++++|+++.+.|+
T Consensus 261 ~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~ 299 (395)
T 1vef_A 261 PLGVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIR 299 (395)
T ss_dssp SCEEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred ceEEEEehH--------HHHhhhccCCcCCCcCCCHHHHHHHHHHHH
Confidence 999999864 356665542 22345678888888776664
No 122
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=3.8e-24 Score=195.78 Aligned_cols=188 Identities=11% Similarity=0.087 Sum_probs=147.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAAN 137 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~ 137 (311)
.++++.+.+++.+.+.. .|.+. ....++|++++++++ .+++ +|++|+|+++++.+++.+++++| |+
T Consensus 27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~g-d~ 95 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEG-DR 95 (396)
T ss_dssp CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTT-CE
T ss_pred CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCC-Ce
Confidence 45678888877654421 35431 237889999999994 3556 79999999999999999999999 99
Q ss_pred EEecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 138 ILLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 138 Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
|+++.|+|..+. ..++..|.+++.++.+ .++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+
T Consensus 96 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~ 170 (396)
T 2ch1_A 96 VLIAVNGIWAERAVEMSERYGADVRTIEGP--PDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICH 170 (396)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHH
T ss_pred EEEEcCCcccHHHHHHHHHcCCceEEecCC--CCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHH
Confidence 999999999985 4788899999999874 3567999999999887 8999999999999999999 899999999
Q ss_pred HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++|++||+|++|+.. . ....+..+ +..+++.|++|.++. +.++|++++++
T Consensus 171 ~~~~~li~Dea~~~g---~-~~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~ 220 (396)
T 2ch1_A 171 QHDCLLIVDAVASLC---G-VPFYMDKW---EIDAVYTGAQKVLGA-PPGITPISISP 220 (396)
T ss_dssp HTTCEEEEECTTTBT---T-BCCCTTTT---TCCEEECCCC-CCCC-CSSCEEEEECH
T ss_pred HcCCEEEEEcccccc---C-Cccchhhc---CcCEEEEcCCccccC-CCCeEEEEECH
Confidence 999999999999831 1 11222222 223777899997543 34569988853
No 123
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.91 E-value=1e-23 Score=196.87 Aligned_cols=202 Identities=17% Similarity=0.130 Sum_probs=153.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
+.++.+.+++. .. ...|.+..+..++|++++++++ .+++++|+|+++++..++.+++++| | +++
T Consensus 55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~g-d--i~~ 118 (456)
T 2ez2_A 55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPG-Q--YVA 118 (456)
T ss_dssp CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTT-C--EEE
T ss_pred cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCC-C--Eec
Confidence 44566666654 22 2368777789999999999994 3479999999999999999999999 8 788
Q ss_pred CCCC-cchHHHHHHcCcEEEEeeccCC----C----CcccCHHHHHhhcCCCc----cEEEEeCCCC-CCccCCCHHHHH
Q 021547 142 RPGW-PFYESFAKRNHIEVRHFDLLPE----R----GWEVDLEAVEALADENT----AAIVIINPCN-PCGNVLTYQHLQ 207 (311)
Q Consensus 142 ~p~~-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~~~l~~~l~~~~----~~i~i~~p~n-ptG~~~~~~~l~ 207 (311)
.|+| ..+...++..|.+++.+++... . ++.+|+++|++.+++++ +++++++|+| |||.+++.++++
T Consensus 119 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~ 198 (456)
T 2ez2_A 119 GNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMR 198 (456)
T ss_dssp ESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred cccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHH
Confidence 8999 7778899999999999987631 1 36789999999887654 8889999998 999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccC----------CccCCCCCCccc-ccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCc
Q 021547 208 KIAETARKLGILVIADEVYGH----------LAFGSTPYIPMG-VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGV 276 (311)
Q Consensus 208 ~l~~l~~~~~~~li~D~ay~~----------~~~~~~~~~~~~-~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~ 276 (311)
+|.++|++||++||+|++|.. +.+.+....++. .+....+++++ |++|. +++| +.||++++++
T Consensus 199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~~--- 272 (456)
T 2ez2_A 199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMNDD--- 272 (456)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESCH---
T ss_pred HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECCH---
Confidence 999999999999999999986 445554321110 01111234554 78887 4566 7899987443
Q ss_pred cchhhHHHHHhhh
Q 021547 277 LQKSGIVGSIKAC 289 (311)
Q Consensus 277 ~~~~~~~~~~~~~ 289 (311)
++++.++..
T Consensus 273 ----~~~~~~~~~ 281 (456)
T 2ez2_A 273 ----EMFSSAKEL 281 (456)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHHH
Confidence 366665543
No 124
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.91 E-value=1.7e-23 Score=193.95 Aligned_cols=244 Identities=17% Similarity=0.111 Sum_probs=164.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+++.++||+.+.+....+ ..+|.+.+++.+.+..... ..|.. ....++++.+++++ + ..+++|++|+|+
T Consensus 41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~--~~~~~v~~~~gg 112 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT----P--QPLECVFLADSG 112 (429)
T ss_dssp TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS----C--TTCCEEEEESSH
T ss_pred CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC----C--CCCCEEEEeCCH
Confidence 467788998886432222 2589999999998864321 12322 12345555555555 3 467899999999
Q ss_pred HHHHHHHHHHHh---c----CCCCEEEecCCCCcchHHHHHH-cC-------------cEEEEeeccC---CCCc-ccCH
Q 021547 120 MEAVEIILTVIT---R----LGAANILLPRPGWPFYESFAKR-NH-------------IEVRHFDLLP---ERGW-EVDL 174 (311)
Q Consensus 120 ~~a~~~~~~~l~---~----~g~d~Vl~~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~---~~~~-~~d~ 174 (311)
++++..++.++. + +| |+|++..|+|+++...+.. .+ .++..++... ...+ .+|+
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~-~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 191 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEAR-QRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCC-CEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred HHHHHHHHHHHHHHhcccCCCC-CeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence 999999988764 2 58 9999999999876443322 11 1344444321 1123 4789
Q ss_pred HHHHhhcC---CCccEEEEeCC--CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547 175 EAVEALAD---ENTAAIVIINP--CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248 (311)
Q Consensus 175 ~~l~~~l~---~~~~~i~i~~p--~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
+.|++.++ ++++ +++++| +||||. ..+.+++++|.++|++||+++|+||+|.++.+.|.. ..+.......++
T Consensus 192 ~~l~~~l~~~~~~~~-~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~ 269 (429)
T 1s0a_A 192 VGFARLMAAHRHEIA-AVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDI 269 (429)
T ss_dssp HHHHHHHHHHTTTEE-EEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSE
T ss_pred HHHHHHHHhCCCCEE-EEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCE
Confidence 99999886 3444 455566 589996 667888999999999999999999999976554432 222222222333
Q ss_pred EEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547 249 ITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 249 i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~ 309 (311)
+ |+||.++ +| +|+||++++. ++++.+... ...++++|+++|+++.+.|+
T Consensus 270 ~---t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~ 325 (429)
T 1s0a_A 270 L---CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLA 325 (429)
T ss_dssp E---EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred E---Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence 3 7899987 58 9999999853 367777652 23456779999988877764
No 125
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.91 E-value=2.3e-23 Score=189.00 Aligned_cols=191 Identities=17% Similarity=0.104 Sum_probs=144.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCC---CCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--
Q 021547 61 FRTAAVAEDAIVDSVRSSMFN---CYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-- 131 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~---~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-- 131 (311)
.++++.+.+++.+.+...... .|....+ ..++++.+++++ | ++++++++|+|+++++.+++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~~~a~~~~~~~~~~~ 83 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHT----T--CTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEECCchHHHHHHHHHhhhh
Confidence 467889999999988642110 1111111 224555555555 3 356789999999999999999998
Q ss_pred --cCCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547 132 --RLGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206 (311)
Q Consensus 132 --~~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l 206 (311)
++| |+|+++.+.|+++...+.. .|.+++.++.+ .++.+|+++|++.++++++++++++|+||||..++ +
T Consensus 84 ~~~~g-d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~ 157 (382)
T 4hvk_A 84 NARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---V 157 (382)
T ss_dssp HGGGC-CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---H
T ss_pred hcCCC-CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---H
Confidence 899 9999999999988765444 69999999875 45679999999999999999999999999999999 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 207 ~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
++|.++|++||+ +|+|++|+... ....+... +..+++.|+||.+|.+| +|++++++.
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~~ 214 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE 214 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHH---TCSEEEEESGGGTSCTT--CEEEEEETT
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhc---CCCEEEEeHHHhcCCCc--eEEEEEcCc
Confidence 899999999999 99999987521 11122211 23489999999877666 677776654
No 126
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.91 E-value=1.7e-23 Score=191.75 Aligned_cols=238 Identities=16% Similarity=0.119 Sum_probs=169.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.+.+....+ ..+|.+.+++.+.+..... .| ..+..+.++.+++++.+.+| .+++++|+|++++
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea 105 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLLH-TS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES 105 (395)
T ss_dssp TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCSC-CC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhccc-cc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 478899999884321111 2679999999998864321 12 12334455555555555433 5799999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC-------------cEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH-------------IEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
+..++..+.. ++ ++|++..|+|+++...+...+ .++..++. .|+++|++.++
T Consensus 106 ~~~al~~~~~~~~~~g~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 177 (395)
T 3nx3_A 106 IEGAMKTARKYAFNKGVKG-GQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVN 177 (395)
T ss_dssp HHHHHHHHHHHHHHTTCTT-CEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHhhccCCCC-CEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhcc
Confidence 9999988763 36 999999999987654333332 23444432 27999999998
Q ss_pred CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547 183 ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261 (311)
Q Consensus 183 ~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 261 (311)
++++++++..++|++|.. ++++++++|.++|++||+++|+||+|.++...|.. .....++.. ..+.++||.++.
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~---~d~~t~sK~~~~- 252 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF-FAYEHAQIL---PDIMTSAKALGC- 252 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCC---CSEEEECGGGTT-
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc-hhHHhcCCC---CCEEEecccccC-
Confidence 888888888877777775 78888999999999999999999999987655432 222222222 223478999875
Q ss_pred cceeeEEEeeCCCCccchhhH-HHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 262 GWRFGWLATNDPNGVLQKSGI-VGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 262 G~r~G~i~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+|+||+++++ ++ ++.++.. ...+++.++++|+++.+.|+
T Consensus 253 G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 253 GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 99999999853 36 6777655 33567889999999888775
No 127
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=7.1e-24 Score=190.71 Aligned_cols=187 Identities=19% Similarity=0.146 Sum_probs=144.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
.++++.+.+++.+.+... ..|....+..++|++++++++ .+++++++|+|+++++..++.++.++| |+|++
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~ 80 (352)
T 1iug_A 10 VRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFR------TEGEVLILTGSGTLAMEALVKNLFAPG-ERVLV 80 (352)
T ss_dssp CCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHT------CSSEEEEEESCHHHHHHHHHHHHCCTT-CEEEE
T ss_pred CCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhC------CCCceEEEcCchHHHHHHHHHhccCCC-CeEEE
Confidence 567899999988766421 112222356789999999884 356799999999999999999999999 99999
Q ss_pred cCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--
Q 021547 141 PRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-- 216 (311)
Q Consensus 141 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~-- 216 (311)
+.|+|+++. ..++..|.+++.++.+. ++.+|++++++ ++++++++++|+||||.+++ +++|.++|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 152 (352)
T 1iug_A 81 PVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNP 152 (352)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence 999999865 45567899999998743 45678888877 67899999999999999999 88999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|+++|+|++|+.. .....+..+ +..+++.|+||+++.+ .++||+++++
T Consensus 153 ~~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~ 200 (352)
T 1iug_A 153 EGLVGADMVTSLL----VGEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP 200 (352)
T ss_dssp TCEEEEECTTTBT----TBCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH
T ss_pred CCEEEEECCcccc----Ccceecccc---CeeEEEecCcccccCC-CceeEEEECH
Confidence 9999999999741 111122222 2458899999954433 3479998854
No 128
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=1.1e-23 Score=189.83 Aligned_cols=203 Identities=12% Similarity=0.062 Sum_probs=150.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.+.+|+|+.+.+ .++++.+.+++.+.+.. ....|.......++++.+++++ | ...+|++|+|+++++
T Consensus 6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 467899998863 45789999999887632 1234554444455666666655 3 234699999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCcchHHH--HHHc--CcEEEEeeccCCCCcccCHHHHHh-hcCC-------CccEEEEe
Q 021547 124 EIILTVITRLGAANILLPRPGWPFYESF--AKRN--HIEVRHFDLLPERGWEVDLEAVEA-LADE-------NTAAIVII 191 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~l~~-------~~~~i~i~ 191 (311)
.+++.++.++| |+|+++.|+|..+... +... |.+++.++.. ++.+|+++|++ .+++ ++++++++
T Consensus 73 ~~al~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~ 148 (356)
T 1v72_A 73 ALCLSAMTPPW-GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSIT 148 (356)
T ss_dssp HHHHHTSCCTT-EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEE
T ss_pred HHHHHHhcCCC-CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEE
Confidence 99999999999 9999999999876554 6666 9999988763 36799999999 8875 67899999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceee--E
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG--W 267 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G--~ 267 (311)
+|+| ||.+++.+++++|.++|++||+++|+|++|..+. +.+.....+. +....+ +++.|+||. ++ |+| |
T Consensus 149 ~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~d-~~~~s~sK~-g~---~~G~g~ 221 (356)
T 1v72_A 149 QATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT-WKAGVD-ALSFGATKN-GV---LAAEAI 221 (356)
T ss_dssp SSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT-GGGTCC-EEEECCGGG-TC---SSCEEE
T ss_pred cCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh-hhhcCC-EEEEecccC-CC---cCccEE
Confidence 9876 9999999999999999999999999999997532 2222222211 111122 445699998 43 555 7
Q ss_pred EEe
Q 021547 268 LAT 270 (311)
Q Consensus 268 i~~ 270 (311)
+++
T Consensus 222 ~~~ 224 (356)
T 1v72_A 222 VLF 224 (356)
T ss_dssp EES
T ss_pred EEE
Confidence 766
No 129
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=3.9e-23 Score=189.41 Aligned_cols=190 Identities=19% Similarity=0.119 Sum_probs=152.1
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRH 161 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~ 161 (311)
.+...++++++++++.. +++++++++++++..++.+++++| |+|+++.|.|.++... ++..|.+++.
T Consensus 58 ~~~~~~l~~~la~~~g~--------~~~i~~~sG~~ai~~~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 128 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGA--------AGSAAFGSGMGAISSSTLAFLQKG-DHLIAGDTLYGCTVSLFTHWLPRFGIEVDL 128 (389)
T ss_dssp CHHHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHTTTCCTT-CEEEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence 34567899999999832 367777778899999999999999 9999999999986554 6789999999
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
++. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+. . ++.
T Consensus 129 v~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~---~~~- 193 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-K---PLE- 193 (389)
T ss_dssp ECT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-C---GGG-
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-C---ccc-
Confidence 875 3899999999999999999999999999998 999999999999999999999875432 1 221
Q ss_pred cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
.+..+++.|+||.++++|.|+ ||++++++ +++++++.... .+...+++.++++.+.++
T Consensus 194 ---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 253 (389)
T 3acz_A 194 ---LGADIALHSVSKYINGHGDVIGGVSSAKTA-------EDIATIKFYRKDAGSLMAPMDAFLCARGMK 253 (389)
T ss_dssp ---TTCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ---cCCeEEEECChhhccCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence 234599999999999999998 99988641 36676665543 344567777776655543
No 130
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=1.1e-23 Score=191.24 Aligned_cols=195 Identities=19% Similarity=0.205 Sum_probs=158.6
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEe
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILL 140 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~ 140 (311)
+.++++.+++.+.+... .|.+..+..++|+.+++++. .+++++++|+++|+..++.++ .++| |+|++
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~g-d~Vi~ 80 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPG-DEVIT 80 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCc-CEEEE
Confidence 34678888888887754 45566788999999999994 247999999999999999999 7899 99999
Q ss_pred cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
+.++|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++ |+||+|...+ +++|.++|+++|+++
T Consensus 81 ~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~l 153 (367)
T 3nyt_A 81 PGFTYVATAETVALLGAKPVYVDIDP-RTYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIPV 153 (367)
T ss_dssp ESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCB
T ss_pred CCCccHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEE
Confidence 99999999999999999999998754 3478999999999988888777 7889998887 999999999999999
Q ss_pred EEeccccC-CccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 221 IADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 221 i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
|+|++|+. ..+++..... +. .+.+.|| +|.++.+|. .|+++++++ ++.++++...
T Consensus 154 i~D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~~-------~l~~~~~~~~ 211 (367)
T 3nyt_A 154 IEDAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTNDD-------ELATAIRQIA 211 (367)
T ss_dssp EEECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESCH-------HHHHHHHHHT
T ss_pred EEECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCCH-------HHHHHHHHHH
Confidence 99999985 3444432222 21 3888897 899887677 889888653 3667666543
No 131
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.91 E-value=5.8e-23 Score=188.43 Aligned_cols=189 Identities=21% Similarity=0.142 Sum_probs=153.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~ 162 (311)
+...++++.+++++. .+++++++|+++|+..++.+++++| |+|+++.|.|.++...+ +..|.+++.+
T Consensus 66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 136 (392)
T 3qhx_A 66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPG-DHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV 136 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence 456788888888873 2478999999999999999999999 99999999999876665 6789999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .++ .
T Consensus 137 ~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~- 200 (392)
T 3qhx_A 137 ALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-S- 200 (392)
T ss_dssp CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-G-
T ss_pred CCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-H-
Confidence 753 899999999999999999999999999998 999999999999999999999854321 111 1
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
.+..+++.|+||.++.+| +|+||++++++ ++++.++.... .+...+++.++++.+.++
T Consensus 201 --~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 201 --LGADVVLHSTTKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp --GTCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred --hCCcEEEEcCccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 123499999999999888 89999998653 36677766533 456778888888776654
No 132
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=4.3e-23 Score=190.61 Aligned_cols=195 Identities=17% Similarity=0.210 Sum_probs=153.1
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCc----HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCE
Q 021547 63 TAAVAEDAIVDSVRSSMFNCYAPMFGL----PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAAN 137 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~ 137 (311)
.++.+.+++.+.+.......|++..|. .++++.+++++ |.+ ++++++++++++.+++.++ +++| |+
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g~~----~~i~~~~gt~al~~~~~~~~~~~g-d~ 84 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----GVP----YCVPTTSGSTALMLALEALGIGEG-DE 84 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----TCS----EEEEESCHHHHHHHHHHHTTCCTT-CE
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----CCC----cEEEeCCHHHHHHHHHHHcCCCCc-CE
Confidence 478999999999876544347776674 55555555555 322 5677777899999999999 8899 99
Q ss_pred EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++++ ||||...+ +++|.++|+++|
T Consensus 85 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~ 157 (418)
T 2c81_A 85 VIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIAQEHN 157 (418)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHHHHTT
T ss_pred EEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHHHHCC
Confidence 99999999999999999999999998753 367899999999998888888754 58998876 999999999999
Q ss_pred CEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 218 ILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 218 ~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++||+|++|+.+. +++.+. ..+. .+.+.|| ||.++. | |+||++++++ +++++++..
T Consensus 158 ~~li~D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~ 216 (418)
T 2c81_A 158 LFVIEDCAQSHGSVWNNQRA---GTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKNP-------RLFELIQQL 216 (418)
T ss_dssp CEEEEECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCS-S-SCEEEEESCH-------HHHHHHHHH
T ss_pred CEEEEECcccccCccCCEec---cccc----ceEEEeccCCcccCC-C-CeEEEEECCH-------HHHHHHHHH
Confidence 9999999999875 544322 1221 2777787 999887 8 9999998543 366666544
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.91 E-value=2.3e-23 Score=191.46 Aligned_cols=225 Identities=20% Similarity=0.139 Sum_probs=156.3
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547 50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127 (311)
Q Consensus 50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~ 127 (311)
.+.+.|.........+.+.+++...........|. +.....++++.+++++.. ++.++++++++++..++
T Consensus 26 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~--------~~~i~~~sG~~a~~~~l 97 (398)
T 1gc0_A 26 GALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG--------EAGLALASGMGAITSTL 97 (398)
T ss_dssp TBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHH
T ss_pred CCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHH
Confidence 34455543333344455555543211111111233 344667888888888832 25666666689999999
Q ss_pred HHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 128 TVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 128 ~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
.+++++| |+|+++.|.|.++...+ +..|.+++.++. .|++++++.++++++++++++|+||||.+++
T Consensus 98 ~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 168 (398)
T 1gc0_A 98 WTLLRPG-DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD- 168 (398)
T ss_dssp HHHCCTT-CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC-
T ss_pred HHHhcCC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc-
Confidence 9999999 99999999999887665 677889888875 2899999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhH
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGI 282 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~ 282 (311)
+++|.++|+++|+++|+|++|....+.. ++ . .+..+++.|+||.++.+|.|+ ||+++++ ++
T Consensus 169 --l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~---~~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~ 230 (398)
T 1gc0_A 169 --IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E---LGADLVVHSATKYLSGHGDITAGIVVGSQ--------AL 230 (398)
T ss_dssp --HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G---GTCSEEEEETTTTTTCSSSCCCEEEEECH--------HH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h---hCceEEEECCccccCCCCCCeEEEEEECh--------HH
Confidence 9999999999999999999999754421 12 1 124599999999999999998 9988753 23
Q ss_pred HH-HHhhhhc--cccCCCchhHHHHHhhhh
Q 021547 283 VG-SIKACLG--VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 283 ~~-~~~~~~~--~~~~~~~~~q~~~~~~l~ 309 (311)
+. .++.... .+...+++.++++.+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 1gc0_A 231 VDRIRLQGLKDMTGAVLSPHDAALLMRGIK 260 (398)
T ss_dssp HHHHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence 33 4444422 245678888887766554
No 134
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.91 E-value=2e-23 Score=194.99 Aligned_cols=250 Identities=19% Similarity=0.138 Sum_probs=173.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.+|||..|.+....+ ..+|.+.+++.+++... ..|....+..+.+..+++++.+.++.. ..++|++|+|+++|
T Consensus 62 ~G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA 137 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA 137 (453)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred CCCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence 477889998773221111 24899999999998754 245544456677777777777765522 25789999999999
Q ss_pred HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCc--------------EEEEeeccC--CCCcccC--------HHHH
Q 021547 123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNHI--------------EVRHFDLLP--ERGWEVD--------LEAV 177 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l 177 (311)
++.+++.+.. +|.++|++..++|+++...+...+. .+..++... .+.++.+ ++.|
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 9999987753 3438999999999877654443321 344444321 1112222 4667
Q ss_pred HhhcCCCccEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 178 EALADENTAAIVIINPCNPCG--NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 178 ~~~l~~~~~~i~i~~p~nptG--~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
++.+..+..+++++.|.|++| ...+++.+++|.++|++||+++|+||+|.++.+.|. ......+... ..+.+||
T Consensus 218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~a~~~~~~~---pdi~t~s 293 (453)
T 4ffc_A 218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-WFASEHEGIV---PDIVTMA 293 (453)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCC---CSEEEEC
T ss_pred HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-cchhhhcCCC---cchHhhh
Confidence 776666677888888877766 455778899999999999999999999998766553 2222222222 2244789
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++. |+|+||++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 294 K~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 339 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALG 339 (453)
T ss_dssp GGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred hhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence 99876 99999998853 466666654 33567889999999888775
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.91 E-value=1.3e-23 Score=194.96 Aligned_cols=248 Identities=15% Similarity=0.077 Sum_probs=163.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++.++||+.+.+....+. .+|.+.+++.+.+..... +. ..+..+.+..+++.+.+.++. ..++|++|+|++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~~--~~~~v~~~~gg~ea 114 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITPP--GLDRALLLSTGAES 114 (433)
T ss_dssp TCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSCT--TCCEEEEESCHHHH
T ss_pred CCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHH
Confidence 4667889877643221122 578999999998865321 11 122234555555555555543 46899999999999
Q ss_pred HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcC------------cEEEEeeccC--CCCc--------ccCHHHHHh
Q 021547 123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNH------------IEVRHFDLLP--ERGW--------EVDLEAVEA 179 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~~~l~~ 179 (311)
+..+++.+.. +|.++|++..|+|+++...+.... ..+..++... ...+ .+|++.|++
T Consensus 115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~ 194 (433)
T 1zod_A 115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD 194 (433)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence 9999987642 332799999999987654333220 1233333211 1112 246899998
Q ss_pred hcCC---CccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547 180 LADE---NTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI 254 (311)
Q Consensus 180 ~l~~---~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 254 (311)
.+++ +...+++++| +||||. .++++++++|.++|++||++||+||+|.++.+.|.. ..+..+....+ +.|+
T Consensus 195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~ 270 (433)
T 1zod_A 195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTL 270 (433)
T ss_dssp HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEE
T ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEe
Confidence 8762 2334455666 588996 678899999999999999999999999987655432 22222222223 3489
Q ss_pred cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~ 309 (311)
||.|+. |+|+||+++++ ++++.+... ...+++.++++|+++.+.|+
T Consensus 271 sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~ 319 (433)
T 1zod_A 271 SKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLD 319 (433)
T ss_dssp CHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred cccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 999986 99999999854 367777652 12456789999988877764
No 136
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=7.3e-24 Score=191.39 Aligned_cols=199 Identities=13% Similarity=0.123 Sum_probs=152.3
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-M-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
++++|+.| | .++++.+.+++.+.+. +.|.. . .+..++|++++++++. +.+.+++++|+|+++++
T Consensus 4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence 36899988 4 2467889888876431 12221 1 6889999999999941 22335799999999999
Q ss_pred HHHHHHHhcCCCCEEEecC-CCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCcc
Q 021547 124 EIILTVITRLGAANILLPR-PGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGN 199 (311)
Q Consensus 124 ~~~~~~l~~~g~d~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~ 199 (311)
.+++.+++++| |+|++.. ++|.. +...++..|.+++.+++. .++.+|+++|++.+++ +++++++++|+||||.
T Consensus 70 ~~~~~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~ 146 (366)
T 1m32_A 70 EAVLGSALGPQ-DKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG--EVARPDVQAIDAILNADPTISHIAMVHSETTTGM 146 (366)
T ss_dssp HHHHHHSCCTT-CCEEEEESSHHHHHHHHHHHHHTCCEEEEECC--TTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred HHHHHHhcCCC-CeEEEEeCCCccHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCeEEEEEecccCCcce
Confidence 99999999999 9888775 66654 667788899999999874 3456899999998865 5789999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++ +++|.++|++||+++|+|++|+.... ...+. ..+..+++.|+||+++.+ .++||+++++
T Consensus 147 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~---~~~~di~~~s~~K~~~~~-~g~G~~~~~~ 208 (366)
T 1m32_A 147 LNP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIA---ALHIDYLISSANKCIQGV-PGFAFVIARE 208 (366)
T ss_dssp ECC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTT---TTTCSEEEEESSSTTCCC-SSEEEEEEEH
T ss_pred ecC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccc---ccCccEEEecCcccccCC-CceEEEEECH
Confidence 999 89999999999999999999985321 11222 223459999999976432 4579999864
No 137
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.91 E-value=1.5e-23 Score=192.02 Aligned_cols=202 Identities=16% Similarity=0.079 Sum_probs=150.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCC----CCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPM----FGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~----~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
.+++|.|+.+.+ .++++.+.+++.+.+... ....|... ....++++.+++++ | +++++|++|
T Consensus 18 ~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~v~~~ 86 (400)
T 3vax_A 18 GSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV----S--AEPDELIFT 86 (400)
T ss_dssp ----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT----T--CCGGGEEEE
T ss_pred cCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc----C--CCCCcEEEe
Confidence 567788887763 367899999999887531 11012111 12345555555555 3 356799999
Q ss_pred CChHHHHHHHHHHHh----cCCCC-EEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547 117 LGCMEAVEIILTVIT----RLGAA-NILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~g~d-~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i 188 (311)
+|+++++.+++.+++ ++| | +|+++.+.|+++...+.. .|.+++.++++ .++.+|+++|++.++++++++
T Consensus 87 ~g~t~al~~~~~~l~~~~~~~g-d~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v 163 (400)
T 3vax_A 87 SGATESNNIALLGLAPYGERTG-RRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPG--PSGRISVEGVMERLRPDTLLV 163 (400)
T ss_dssp SCHHHHHHHHHHTTHHHHHHHT-CCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCC--TTCCCCHHHHHTTCCTTEEEE
T ss_pred CCHHHHHHHHHHHHHHhhccCC-CCEEEECccccHhHHHHHHHHHhcCCeEEEEccC--CCCCcCHHHHHHhcCCCceEE
Confidence 999999999999998 899 9 999999999987655444 69999999875 356789999999999999999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547 189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i 268 (311)
++++|+||||.+++ +++|.++|+++|++||+|++|+... ....+..+ ..+++.|+||.++.+| +|++
T Consensus 164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~ 230 (400)
T 3vax_A 164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL 230 (400)
T ss_dssp ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence 99999999999999 8999999999999999999998522 11222222 3389999999876555 6666
Q ss_pred E-eeC
Q 021547 269 A-TND 272 (311)
Q Consensus 269 ~-~~~ 272 (311)
+ +++
T Consensus 231 ~~~~~ 235 (400)
T 3vax_A 231 VTRRR 235 (400)
T ss_dssp EECBC
T ss_pred EEecc
Confidence 6 665
No 138
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=4.4e-23 Score=187.41 Aligned_cols=204 Identities=14% Similarity=0.110 Sum_probs=163.5
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
+.++++|+.+.|. ..+ +.+++.+.+... .|.+..+..++|+++++++.. +++++++|+++++
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHNA--------PHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTTC--------SEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhCC--------CcEEEeCCHHHHH
Confidence 3567888888854 234 888888877654 466777899999999999942 3789999999999
Q ss_pred HHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 124 EIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
..++.++ .++| |+|+++.|+|..+...++..|.+++.++.. .++.+|++.+++.+++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~ 140 (374)
T 3uwc_A 67 AMSFKMLNIGAG-DEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD 140 (374)
T ss_dssp HHHHHHTTCCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC
T ss_pred HHHHHHcCCCCC-CEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC
Confidence 9999999 8999 999999999999999999999999999875 5678999999999988887776 8899999988
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccch
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
+++|.++|+++|+++|+|++|.... +++.+... + ..+++.|+| |.++.+|. .|+++++++
T Consensus 141 ---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~---~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~------ 203 (374)
T 3uwc_A 141 ---MPALAKIAKKHNLHIVEDACQTILGRINDKFVGS---W----GQFACFSLHPLKNLNVWSD-AGVIITHSD------ 203 (374)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS---S----SSEEEEECSSSSSSCCSSC-CEEEEESCH------
T ss_pred ---HHHHHHHHHHcCCEEEEeCCCccCceeCCeeccc---c----ccEEEEeCCCCCcCCccce-eEEEEeCCH------
Confidence 9999999999999999999998642 33222111 1 137788866 99876566 888887653
Q ss_pred hhHHHHHhhh
Q 021547 280 SGIVGSIKAC 289 (311)
Q Consensus 280 ~~~~~~~~~~ 289 (311)
.+.++++..
T Consensus 204 -~~~~~~~~~ 212 (374)
T 3uwc_A 204 -EYAEKLRLY 212 (374)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 356666554
No 139
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.90 E-value=4.2e-23 Score=192.67 Aligned_cols=245 Identities=14% Similarity=0.063 Sum_probs=168.3
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.|.+....+ ..+|.+.+++.+++..... ....+..+.+..+++++.+.++. ..+ |++|+|+++|
T Consensus 47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggseA 119 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSEA 119 (452)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHHH
Confidence 478899999883221112 3579999999999875322 22234456666666666665543 334 9999999999
Q ss_pred HHHHHHHHh-----c---CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcc-cC-------
Q 021547 123 VEIILTVIT-----R---LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWE-VD------- 173 (311)
Q Consensus 123 ~~~~~~~l~-----~---~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~-~d------- 173 (311)
++.+++.+. . ++ ++|++..|+|+++...+...+.. ...++......+. -|
T Consensus 120 ~~~al~~~~~~~~~~g~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 120 NETAFKIARQYYAQKGEPHR-YKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHTTTCTTC-CEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHhcCCCCC-CEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 999999987 4 56 99999999999876555444321 2233221100000 01
Q ss_pred --HHHHHhhcC----CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 174 --LEAVEALAD----ENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 174 --~~~l~~~l~----~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
++.|++.++ ++++++++..+ +| +|.++ +++.+++|.++|++||+++|+||+|.++.+.|.. .....+...
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~~~~~~~~~ 276 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA-FGFMNYDVK 276 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc-chhhhcCCC
Confidence 788988876 45666666666 79 99766 8888999999999999999999999987666542 223333322
Q ss_pred CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh------h-hccccCCCchhHHHHHhhhh
Q 021547 246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA------C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++ .++||.++. | +|+||++++. ++++.+.. + ...+++.++++|+++.+.|+
T Consensus 277 ~di---~t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 336 (452)
T 3n5m_A 277 PDI---ITMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLE 336 (452)
T ss_dssp CSE---EEECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHH
T ss_pred CCE---EeecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHH
Confidence 233 378999876 9 9999999853 46776643 1 23467889999999888775
No 140
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=5.5e-23 Score=187.96 Aligned_cols=202 Identities=16% Similarity=0.156 Sum_probs=160.8
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
++|+|+. |. + ++.+.+++.+.+... .|.+..+..++|+++++++. .+++++|+|+++++.+
T Consensus 9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 5788876 32 2 367789998888654 24455688999999999994 2479999999999999
Q ss_pred HHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 126 ILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 126 ~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++++ ||+|...+
T Consensus 70 ~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~-- 142 (393)
T 1mdo_A 70 ALMALGIGEG-DEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD-- 142 (393)
T ss_dssp HHHHTTCCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC--
T ss_pred HHHHcCCCCC-CEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC--
Confidence 99999 8999 9999999999999999999999999998753 456799999999998888888765 48999887
Q ss_pred HHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547 205 HLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV 283 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 283 (311)
+++|.++|+++|+++|+|++|+. +.+.+.+ +.. +.+++.|+||..+++|.|+||++++++ +++
T Consensus 143 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~-----~d~~~~S~~k~K~l~~~~~g~~~~~~~-------~~~ 206 (393)
T 1mdo_A 143 -LDAIYALGERYGIPVIEDAAHATGTSYKGRH---IGA-----RGTAIFSFHAIKNITCAEGGIVVTDNP-------QFA 206 (393)
T ss_dssp -HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---TTS-----SSEEEEECCTTSSSCSSSCEEEEESCH-------HHH
T ss_pred -HHHHHHHHHHcCCeEEEECccccCCeECCee---cCC-----CCeEEEeCCCCCccccccceEEEeCCH-------HHH
Confidence 99999999999999999999995 4444321 111 458999999444455669999998643 366
Q ss_pred HHHhhh
Q 021547 284 GSIKAC 289 (311)
Q Consensus 284 ~~~~~~ 289 (311)
++++..
T Consensus 207 ~~l~~~ 212 (393)
T 1mdo_A 207 DKLRSL 212 (393)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 141
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=8.5e-23 Score=186.86 Aligned_cols=209 Identities=18% Similarity=0.204 Sum_probs=157.5
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+-+++++++.+.|. .++.+.+++.+.+..+ .|. +..+..++|+++++++.. +++++++|+++
T Consensus 20 ~~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~gt~ 82 (391)
T 3dr4_A 20 HMSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIACNNGTT 82 (391)
T ss_dssp --------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEEESSHHH
T ss_pred hcCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEEeCCHHH
Confidence 34678999999864 2367888888887654 355 567889999999999942 37889999999
Q ss_pred HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547 122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200 (311)
Q Consensus 122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~ 200 (311)
++.+++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++ ++||||..
T Consensus 83 al~~~l~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~ 157 (391)
T 3dr4_A 83 ALHLALVAMGIGPG-DEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQI 157 (391)
T ss_dssp HHHHHHHHHTCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCC
T ss_pred HHHHHHHHcCCCCc-CEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCCh
Confidence 999999999 8899 9999999999999999999999999998754 4578999999999988888777 56899999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK 279 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 279 (311)
.+ +++|.++|+++|+++|+|++|+. ..+.+.+. ..+. .+.+.||||..+++|.+.|+++++++
T Consensus 158 ~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~~----di~~~S~s~~K~l~~g~gg~~~~~~~------ 221 (391)
T 3dr4_A 158 CD---MDPILEVARRHNLLVIEDAAEAVGATYRGKKS---GSLG----DCATFSFFGNAIITTGEGGMITTNDD------ 221 (391)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECBTTSSSCCBSCEEEEESCH------
T ss_pred hh---HHHHHHHHHHcCCEEEEECcccccceECCeee---cccC----CEEEEECCCCCcCCcCCeEEEEECCH------
Confidence 88 89999999999999999999985 33333211 1111 17777877333345567899888653
Q ss_pred hhHHHHHhhhh
Q 021547 280 SGIVGSIKACL 290 (311)
Q Consensus 280 ~~~~~~~~~~~ 290 (311)
.+.++++...
T Consensus 222 -~~~~~~~~~~ 231 (391)
T 3dr4_A 222 -DLAAKMRLLR 231 (391)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 3666665543
No 142
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.90 E-value=4.1e-23 Score=184.73 Aligned_cols=184 Identities=16% Similarity=0.093 Sum_probs=147.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccC
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLP 166 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~ 166 (311)
+++++++++++. + +.++++++++++..++.++.++| |+|+++.|+|.++...+ +..|.+++.++.
T Consensus 2 ~l~~~la~~~g~------~--~~i~~~sG~~a~~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 70 (331)
T 1pff_A 2 ALEGKIAKLEHA------E--ACAATASGMGAIAASVWTFLKAG-DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHHHTC------S--EEEEESSHHHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred hHHHHHHHHhCC------C--eEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence 689999999842 2 44555555899999999999999 99999999999876654 558999988875
Q ss_pred CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSI 245 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~~~~~~~~~~~~~~ 245 (311)
.|++.+++.++++++++++++|+||||..++ +++|.++|++ +|+++|+|++|....+. .++ . .
T Consensus 71 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~---~ 134 (331)
T 1pff_A 71 -----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-D---L 134 (331)
T ss_dssp -----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-G---G
T ss_pred -----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-h---c
Confidence 3788999999989999999999999999998 9999999999 99999999999865432 122 1 2
Q ss_pred CCeEEEecCcccCCCCcce-eeEEEeeCCCCccchhhHHHHHhhhhcc--ccCCCchhHHHHHhhh
Q 021547 246 VPVITLGSISKRWIVPGWR-FGWLATNDPNGVLQKSGIVGSIKACLGV--RSGPSTLIQVCEMFLL 308 (311)
Q Consensus 246 ~~~i~i~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l 308 (311)
++++++.|+||.|+++|.| +||++++++ ++++.++..... +...+++.|+++.+.+
T Consensus 135 ~~d~~~~s~~K~~~~~~~r~~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 193 (331)
T 1pff_A 135 GVDIVVHSATKYINGHTDVVAGLVCSRAD-------IIAKVKSQGIKDITGAIISPHDAWLITRGT 193 (331)
T ss_dssp TCSEEEEETTTTTSSSSSCCCEEEEECHH-------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred CCcEEEEECccccCCCCCceEEEEEeCcH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCc
Confidence 3569999999999999999 799988541 377777776443 4567888887755444
No 143
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=1e-23 Score=191.80 Aligned_cols=191 Identities=16% Similarity=0.072 Sum_probs=145.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~ 140 (311)
.++++.+.+++.+.+... ..+.......++++.+++++. .+...+++++|+|+++++. ++..++++| |+|++
T Consensus 11 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~----~~~~~~~v~~~~g~t~al~-~~~~~~~~g-d~vi~ 82 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVMG----ASKNYQPLIIPGGGTSAME-SVTSLLKPN-DKILV 82 (384)
T ss_dssp SCCCHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHHT----CCTTSEEEEEESCHHHHHH-HGGGGCCTT-CEEEE
T ss_pred CCCCHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHhC----CCCCCcEEEEcCCcHHHHH-HHHhhcCCC-CEEEE
Confidence 467888888877654321 011112345566777777773 2222378999999999999 999999999 99999
Q ss_pred cCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 141 PRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 141 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
+.|+|.+ +...++..|.+++.++++. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++||
T Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 157 (384)
T 3zrp_A 83 VSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKYV 157 (384)
T ss_dssp ECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGGE
T ss_pred ecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhcC
Confidence 9999965 6667788999999998753 457899999999877 8999999999999999999 889999999999
Q ss_pred CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++|+|++|+.... ...+. ..+..+++.|+||+++. +.++||+++++
T Consensus 158 ~~li~D~a~~~~~~----~~~~~---~~~~d~~~~s~~K~~~~-~~g~g~~~~~~ 204 (384)
T 3zrp_A 158 ELIVVDGVSSVGAE----EVKAE---EWNVDVYLTASQKALGS-AAGLGLLLLSP 204 (384)
T ss_dssp EEEEEECTTTTTTS----CCCTT---TTTCSEEEEETTSTTCC-CSSEEEEEECH
T ss_pred CEEEEECcccccCc----ccccc---ccCCCEEEecCcccccC-CCceEEEEECH
Confidence 99999999985321 11222 22345999999998743 24489999854
No 144
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-22 Score=191.19 Aligned_cols=206 Identities=14% Similarity=0.077 Sum_probs=165.2
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----
Q 021547 61 FRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR----- 132 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~----- 132 (311)
+..++.+.+++.+.+... ....|...+|..++++.+++++.+.+|.+...+++++|+|+++++.+++.++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 74 YHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp SCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 345578888888877642 222466666788999999999999888776788999999999999999999864
Q ss_pred CC--CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547 133 LG--AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 133 ~g--~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~ 210 (311)
+| .|+|+++.++|..+...++..|++++.++++. +++.+|++.|+++++++++++++++|+||||.+.+ +++|.
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~ 229 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLG 229 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTT
T ss_pred CCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHH
Confidence 23 27999999999999999999999999998754 46789999999999999999999999999999988 88999
Q ss_pred HHHHHhCCEEEEeccccCCccC-----CCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 211 ETARKLGILVIADEVYGHLAFG-----STPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~~~~~-----~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
++|+++|+++|+|++|+.+... +.... ++ .+...+..+++.|++|. +..|.++||+++++
T Consensus 230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~ 295 (497)
T 3mc6_A 230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN 295 (497)
T ss_dssp THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS
T ss_pred HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC
Confidence 9999999999999999854321 11111 11 11222335888899997 56788999999865
No 145
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.90 E-value=4.4e-23 Score=189.91 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=149.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~ 162 (311)
++..++|++++++++. . +.|++++| ++++..++. ++++| |+|+++.|.|.+.... ++..|++++.+
T Consensus 67 p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 136 (403)
T 3cog_A 67 PTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAG-DQIICMDDVYGGTNRYFRQVASEFGLKISFV 136 (403)
T ss_dssp HHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTT-CEEEEESSCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred chHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCC-CEEEEeCCCcchHHHHHHHHHHHcCCEEEEE
Confidence 4678999999999943 2 45565555 689999999 88999 9999999999874443 45789999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC-CEEEEeccccCCccCCCCCCcccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG-ILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~-~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
+.. |++.+++.++++++++++++|+||||.+++ +++|+++|+++| +++|+|++|....+. . ++.
T Consensus 137 ~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~-~---~~~- 201 (403)
T 3cog_A 137 DCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ-R---PLA- 201 (403)
T ss_dssp CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC-C---TTT-
T ss_pred CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC-C---ccc-
Confidence 753 889999999999999999999999999998 999999999999 999999999986542 1 221
Q ss_pred cCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
.+..|+++|+||.++.+| .|+||++++++ +++++++.... .+...+++.|+++.+.++
T Consensus 202 ---~~~div~~S~sK~~~g~~~~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 261 (403)
T 3cog_A 202 ---LGADISMYSATKYMNGHSDVVMGLVSVNCE-------SLHNRLRFLQNSLGAVPSPIDCYLCNRGLK 261 (403)
T ss_dssp ---TTCSEEEEETTTTTTCSSCCCCEEEEECCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ---cCCeEEEEcChhhccCCCCCeEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 235599999999999877 47999998543 36777766533 345678888888766554
No 146
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=1.9e-23 Score=193.91 Aligned_cols=243 Identities=15% Similarity=0.078 Sum_probs=161.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||..+......+ ..+|.+.+++.+++.......|+ .....++++++++++ + ..++|++|+|++++
T Consensus 53 ~g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----~---~~~~v~~~~sGsea 123 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGTP-TALEVKFAKMLKEAM----P---ALDKVRFVNSGTEA 123 (434)
T ss_dssp TCCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHC----T---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCCC-CHHHHHHHHHHHHhC----C---CCCEEEEeCchHHH
Confidence 478899998875322212 26899999999988764333343 334556666666665 2 46899999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCc-EEEEeeccCCCCc--------c----cCHHHHHhhcCC--Cc
Q 021547 123 VEIILTVITR--LGAANILLPRPGWPFYESFAKRNHI-EVRHFDLLPERGW--------E----VDLEAVEALADE--NT 185 (311)
Q Consensus 123 ~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------~----~d~~~l~~~l~~--~~ 185 (311)
++.++..+.. ++ ++|++..|+|.++...+...+. ...........+. . -|++.|++.+++ ..
T Consensus 124 ~~~ai~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (434)
T 3l44_A 124 VMTTIRVARAYTGR-TKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE 202 (434)
T ss_dssp HHHHHHHHHHHHCC-CEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhhCC-CEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence 9999988765 56 8999999999876543332221 1111110000000 0 178899988763 23
Q ss_pred cEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 186 AAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 186 ~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
.++++++| +|++|.+. +++.+++|.++|++||++||+||+|.++ ..|.. .....+....+ +.++||.++ +|+
T Consensus 203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~ 276 (434)
T 3l44_A 203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQDLLGVTPD---LTALGKVIG-GGL 276 (434)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHHHHcCCCCC---eeehhhhhc-CCc
Confidence 44455555 55666655 8888999999999999999999999987 54432 22222222222 448999987 799
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+||++++. ++++.+... ...++++++++|+++.+.|+
T Consensus 277 ~iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~ 318 (434)
T 3l44_A 277 PIGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLE 318 (434)
T ss_dssp SCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred CeeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 999998743 466666552 33467889999998887765
No 147
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.2e-22 Score=187.49 Aligned_cols=185 Identities=16% Similarity=0.094 Sum_probs=142.2
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~ 163 (311)
...++++.+++++ | .+++++++|+++|+.+++.+++++| |+|+++.|+|.++...++ ..|.+++.++
T Consensus 82 ~~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 152 (414)
T 3ndn_A 82 TVSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAG-DRLVAARSLFGSCFVVCSEILPRWGVQTVFVD 152 (414)
T ss_dssp HHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCccchHHHHHHHHHHHcCcEEEEeC
Confidence 3455666666665 2 3578999999999999999999999 999999999998776664 4999999987
Q ss_pred ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
.. |++.++++++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|....+. .++ .
T Consensus 153 ~~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~-- 215 (414)
T 3ndn_A 153 GD-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-P-- 215 (414)
T ss_dssp TT-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-G--
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-h--
Confidence 63 889999999999999999999999999988 899999999999999999999853221 111 1
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHH-HHhhh-hccccCCCchhHHHHHhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVG-SIKAC-LGVRSGPSTLIQVCEMFL 307 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~q~~~~~~ 307 (311)
.+..+++.|+||.++.+| +++|++++++. .+. .++.. .......+++..+++.+.
T Consensus 216 -~g~div~~S~sK~l~~~G~~~~G~vv~~~~--------~~~~~l~~~~~~~g~~~~~~~a~~~~~~ 273 (414)
T 3ndn_A 216 -LGVDVVVYSGTKHIDGQGRVLGGAILGDRE--------YIDGPVQKLMRHTGPAMSAFNAWVLLKG 273 (414)
T ss_dssp -GTCSEEEEETTTTTTCSSCCCCEEEEECHH--------HHTTHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred -cCCCeEeccCCccccCCCCceEEEEEECHH--------HHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 123489999999999989 89999988542 333 44433 222334566655554443
No 148
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=8.9e-24 Score=189.89 Aligned_cols=188 Identities=16% Similarity=0.099 Sum_probs=144.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL 139 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl 139 (311)
.++++.+.+++.+.+.. +.|. ...+..++|++++++++ .+.+++++++|+|+++++..++.++.+ |+|+
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~---d~vl 78 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR---GPVL 78 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC---CCEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC---CcEE
Confidence 56788999888776643 1232 12346778888888873 233467899999999999999999875 6899
Q ss_pred ecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 140 LPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 140 ~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
++.+.|+++ ...++..|.+++.++.+ .++.+|++.+++.+++ +++++++++|+||||..++ +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 153 (353)
T 2yrr_A 79 VLVNGAFSQRVAEMAALHGLDPEVLDFP--PGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEA 153 (353)
T ss_dssp EEECSHHHHHHHHHHHHTTCCEEEEECC--TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred EEcCCCchHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHc
Confidence 999999875 45668899999999875 3457899999998877 8999999999999999999 88999999999
Q ss_pred CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547 217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND 272 (311)
Q Consensus 217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~ 272 (311)
|+++|+|++|+... ....+..++ ..+++.|++|++ +.+| +||+++++
T Consensus 154 ~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~ 201 (353)
T 2yrr_A 154 GALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL 201 (353)
T ss_dssp TCEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH
T ss_pred CCeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH
Confidence 99999999996421 112232222 248889999964 4456 79999864
No 149
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=4.6e-23 Score=189.40 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=153.7
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~ 120 (311)
.+..+.|+-|. .++++.+.+++.+.+ ...|.+ .....++++.++++++ ...++ +++|+|++
T Consensus 11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt 74 (411)
T 3nnk_A 11 PPSRLLMGPGP------INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSR 74 (411)
T ss_dssp CCCCEEESSSC------CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHH
T ss_pred CccceeecCCC------CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcH
Confidence 44555565443 466788888876443 212322 1123456666666663 23444 78899999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPC 197 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~npt 197 (311)
+++.+++.+++++| |+|+++.|+|.+ +...++..|.+++.++.. .++.+|+++|++.+++ +++++++++|+|||
T Consensus 75 ~al~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 151 (411)
T 3nnk_A 75 AGIEAILVSAIRPG-DKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTST 151 (411)
T ss_dssp HHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHHHHHHHhcCCC-CEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCc
Confidence 99999999999999 999999999977 888999999999999873 4567899999999876 89999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~ 277 (311)
|.+++ +++|.++|++||+++|+|++|+... ....+. ..+..+++.|+||+++. +.++||+++++
T Consensus 152 G~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~---~~~~d~~~~s~~K~l~~-~~g~g~~~~~~----- 215 (411)
T 3nnk_A 152 TMLQP---LAELGEICRRYDALFYTDATASLGG----NPLETD---VWGLDAVSAGMQKCLGG-PSGTSPITLSA----- 215 (411)
T ss_dssp TEECC---CTTHHHHHHHHTCEEEEECTTTBTT----BCCCTT---TTTCSEEECCSTTTTCC-CSSEEEEEECH-----
T ss_pred ceecc---HHHHHHHHHHcCCEEEEECCcccCC----cccchh---ccCCcEEEecCccccCC-CCceEEEEECH-----
Confidence 99999 8899999999999999999987522 111221 22345999999997433 34689998853
Q ss_pred chhhHHHHHhh
Q 021547 278 QKSGIVGSIKA 288 (311)
Q Consensus 278 ~~~~~~~~~~~ 288 (311)
+++++++.
T Consensus 216 ---~~~~~~~~ 223 (411)
T 3nnk_A 216 ---RMEEAIRR 223 (411)
T ss_dssp ---HHHHHHHT
T ss_pred ---HHHHHHhh
Confidence 36666654
No 150
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=1.2e-22 Score=185.68 Aligned_cols=189 Identities=21% Similarity=0.241 Sum_probs=150.0
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEE
Q 021547 86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRH 161 (311)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~ 161 (311)
..+..++++++++++.. . +.+++++| ++++..++.++.++| |+|+++.|+|.+... .++..|.+++.
T Consensus 51 ~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~a~~~~~~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGG------A-GAVLTNTG-MSAIHLVTTVFLKPG-DLLVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp CHHHHHHHHHHHHHHTC------S-EEEEESSH-HHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred CccHHHHHHHHHHHhCC------C-cEEEeCCH-HHHHHHHHHHHhCCC-CEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 35678999999999943 2 55666555 999999999999999 999999999987443 34677889888
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 241 (311)
++.. |++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+. .++ .
T Consensus 122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~ 186 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-A 186 (386)
T ss_dssp ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-G
T ss_pred eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c
Confidence 8752 889999998889999999999999999998 999999999999999999999986543 122 1
Q ss_pred cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.++.+++.|+||.++.+|.|+ ||++++++ ++++.++.... .+...++++++++.+.+
T Consensus 187 ---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 245 (386)
T 1cs1_A 187 ---LGADLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_dssp ---GTCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred ---cCceEEEEcCcccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 235699999999999999997 99998642 36677766533 23457788777765544
No 151
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.90 E-value=1.2e-22 Score=184.62 Aligned_cols=209 Identities=11% Similarity=0.102 Sum_probs=154.5
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
....+|+.|. .++++.+.+++.+.+.. .|.+ +..++.+.+.+++.+.+|.+.+.+.+++|+|+++++.
T Consensus 18 ~~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~ 85 (376)
T 3f0h_A 18 QGMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSME 85 (376)
T ss_dssp SSCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHH
T ss_pred cCceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHH
Confidence 4556676664 46788888888765421 2322 3445666666666665565433345566999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547 125 IILTVITRLGAANILLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~ 202 (311)
+++.+++++| |+|+++.|.|.+.. ..+...|.+++.++.. .++.+|++++++.++++++++++++|+||||.+++
T Consensus 86 ~~~~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 162 (376)
T 3f0h_A 86 AVVMNCFTKK-DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD 162 (376)
T ss_dssp HHHHHHCCTT-CCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC
T ss_pred HHHHhccCCC-CeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC
Confidence 9999999999 99999998776643 4577789999988864 45679999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeCCCCccchhh
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATNDPNGVLQKSG 281 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~ 281 (311)
+++|.++|++||+++|+|++|+.... + ..+... +..+++.|+||.++ .+| +|++++++ +
T Consensus 163 ---l~~i~~l~~~~~~~li~D~~~~~~~~---~-~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~ 222 (376)
T 3f0h_A 163 ---TMMIGEFCKKNNMFFVCDCVSAFLAD---P-FNMNEC---GADVMITGSQKVLACPPG--ISVIVLAP--------R 222 (376)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTTTTS---C-CCHHHH---TCSEEEEETTTTTCCCSS--CEEEEECH--------H
T ss_pred ---HHHHHHHHHHcCCEEEEEcCccccCc---c-cccccc---CccEEEecCcccccCCCc--eEEEEECH--------H
Confidence 99999999999999999999986432 1 112211 23489999999987 566 56776643 3
Q ss_pred HHHHHhh
Q 021547 282 IVGSIKA 288 (311)
Q Consensus 282 ~~~~~~~ 288 (311)
+++++..
T Consensus 223 ~~~~~~~ 229 (376)
T 3f0h_A 223 GVERVEK 229 (376)
T ss_dssp HHHHHHT
T ss_pred HHHHhhc
Confidence 5666553
No 152
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.90 E-value=9.8e-23 Score=190.72 Aligned_cols=215 Identities=16% Similarity=0.127 Sum_probs=154.4
Q ss_pred CCCeeecCCCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 44 PRPVIPLGHGDP--AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 44 ~~~~i~~~~g~p--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+.++++|+.|.+ ++.+.++. +.+.+++.+.+..+.. .|.++.+..++|+++++++. .+++++|+|+++
T Consensus 33 g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~-~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~ 102 (467)
T 1ax4_A 33 GYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDE-AYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRG 102 (467)
T ss_dssp TSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCC-CSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHH
T ss_pred CcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhccc-ccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHH
Confidence 445555555533 11112222 5666777766654433 68777788999999999993 368999999999
Q ss_pred HHHHHHHHHhc----CCCCE---EEecCCCCcchHHHHHHcCcEEEEeeccC---C-----CCcccCHHHHHhhcCC---
Q 021547 122 AVEIILTVITR----LGAAN---ILLPRPGWPFYESFAKRNHIEVRHFDLLP---E-----RGWEVDLEAVEALADE--- 183 (311)
Q Consensus 122 a~~~~~~~l~~----~g~d~---Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~d~~~l~~~l~~--- 183 (311)
|+.+++.+++. +| |+ |+++.+.|..+...+...|.+++.++... . .++.+|++.|++.+++
T Consensus 103 A~~~al~~~~~~~~~~G-d~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~ 181 (467)
T 1ax4_A 103 AENILFPVLLKYKQKEG-KAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA 181 (467)
T ss_dssp HHHHHHHHHHHHHHHTT-CCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhhccCC-CccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCC
Confidence 99999999988 99 98 99887777777888888999888775431 1 1346899999998863
Q ss_pred -CccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--C--------ccCCCCCCccc-ccCCCCCeEE
Q 021547 184 -NTAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--L--------AFGSTPYIPMG-VFGSIVPVIT 250 (311)
Q Consensus 184 -~~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i~ 250 (311)
+++++++++|+||+ |.+++.+++++|.++|++||++||+|+++.. . .+.+.+...+. ......+ ++
T Consensus 182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~ 260 (467)
T 1ax4_A 182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-AL 260 (467)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EE
T ss_pred CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eE
Confidence 68899999999999 8999999999999999999999999998653 1 23332211111 0000111 56
Q ss_pred EecCcccCCCC-cceeeEEEeeCC
Q 021547 251 LGSISKRWIVP-GWRFGWLATNDP 273 (311)
Q Consensus 251 i~s~sK~~~~~-G~r~G~i~~~~~ 273 (311)
+.|+||.++++ | ||++.+++
T Consensus 261 ~~s~sK~~g~~~G---g~~~~~d~ 281 (467)
T 1ax4_A 261 TMSAKKDPLLNIG---GLVAIRDN 281 (467)
T ss_dssp EEETTSTTCCSSC---EEEEESSC
T ss_pred EEeccccCCCCcc---eEEEeCCH
Confidence 68999998766 4 66666533
No 153
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.90 E-value=5.3e-23 Score=192.48 Aligned_cols=250 Identities=13% Similarity=0.037 Sum_probs=172.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.|.+....+ ..+|.+.+++.+++..... .|....+..+.++++++++.+.++ ...++|++|+|+++|
T Consensus 48 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA 123 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES 123 (459)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred CCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 578899998773221112 2479999999999875432 344334556777888888877654 356789999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccC--C-CCcccC------
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLP--E-RGWEVD------ 173 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------ 173 (311)
++.+++.+.. +++++|++..|+|+++...+...+. .+..++... . .++ +|
T Consensus 124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~ 202 (459)
T 4a6r_A 124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV 202 (459)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence 9999999976 3339999999999987655444322 223333211 0 111 34
Q ss_pred --HHHHHhhcCC---CccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 174 --LEAVEALADE---NTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 174 --~~~l~~~l~~---~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
+++|++.+.. +..++++++| ++++|. .++++.+++|.++|++||+++|+||+|.++.+.|.. .....+....
T Consensus 203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~-~~~~~~~~~p 281 (459)
T 4a6r_A 203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW-FGHQHFGFQP 281 (459)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCCC
Confidence 6788887752 3445566665 455555 558999999999999999999999999987666642 2223333333
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh---hh-hccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK---AC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ +|||.++..|+|+||++++. ++++.+. .. ...+++.++++|+++.+.|+
T Consensus 282 di~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 282 DLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA 337 (459)
T ss_dssp SEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred Cee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence 333 68999876669999999853 4777776 33 33467889999999988875
No 154
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=3.5e-23 Score=189.95 Aligned_cols=186 Identities=20% Similarity=0.114 Sum_probs=145.0
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~ 162 (311)
.+..++|++++++++. +++++++++++++++++. ++++| |+|+++.|.|.+... .++..|.+++.+
T Consensus 55 ~~~~~lr~~la~~~g~--------~~~i~~~sGt~a~~~al~-~~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v 124 (393)
T 1n8p_A 55 PNRENLERAVAALENA--------QYGLAFSSGSATTATILQ-SLPQG-SHAVSIGDVYGGTHRYFTKVANAHGVETSFT 124 (393)
T ss_dssp HHHHHHHHHHHHHTTC--------SEEEEESCHHHHHHHHHH-TSCSS-CEEEEESSCCHHHHHHHHHTSTTTCSCCEEE
T ss_pred hhHHHHHHHHHHHhCC--------CcEEEECChHHHHHHHHH-HcCCC-CEEEEeCCCchHHHHHHHHHHHHcCcEEEEe
Confidence 4578999999999842 256666666999999999 88999 999999999985443 456678898888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh----CCEEEEeccccCCccCCCCCCc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL----GILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~----~~~li~D~ay~~~~~~~~~~~~ 238 (311)
+.. | +++++.++++++++++++|+||||.+++ +++|.++|+++ |+++|+|++|..+.+. .+
T Consensus 125 ~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~~-- 189 (393)
T 1n8p_A 125 NDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--NP-- 189 (393)
T ss_dssp SSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--CG--
T ss_pred CCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--CH--
Confidence 753 6 8899999889999999999999999998 99999999999 9999999999976553 11
Q ss_pred ccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 239 MGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
+ .+ +..+++.|+||.++.+|+|+ ||+++.++ ++++.++.... .+...+++.++++.+.+
T Consensus 190 ~-~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 250 (393)
T 1n8p_A 190 L-NF---GADIVVHSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGL 250 (393)
T ss_dssp G-GG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred H-Hc---CCeEEEEECcccccCCCCceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 1 22 35599999999999999999 99887432 36666665532 23345666666554443
No 155
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.90 E-value=3.1e-22 Score=186.23 Aligned_cols=236 Identities=17% Similarity=0.072 Sum_probs=165.9
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+++.++||..|.+. ..++ .+|.+.+++.+++...... .| +.....++++.+++++ ..++|++++|+
T Consensus 74 ~g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sG 142 (439)
T 2oat_A 74 EGRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF--------NYHKVLPMNTG 142 (439)
T ss_dssp TCCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred CCCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence 36778899887532 1355 8899999999998753211 13 2335567777777776 24789999999
Q ss_pred HHHHHHHHHHHh---------cCCCCEEEecCCCCcchH-HHHHHcC------------cEEEEeeccCCCCcccCHHHH
Q 021547 120 MEAVEIILTVIT---------RLGAANILLPRPGWPFYE-SFAKRNH------------IEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 120 ~~a~~~~~~~l~---------~~g~d~Vl~~~p~~~~~~-~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l 177 (311)
++|++.++..+. .+|.|+|++..|+|+++. ..+...| .++..++. .|++.|
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 215 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL 215 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998875 244479999999997753 3444434 34455543 289999
Q ss_pred HhhcC-CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 178 EALAD-ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 178 ~~~l~-~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
++.++ ++++++++...+|++|. .++++.+++|.++|++||+++|+||+|.++.+.|..+ .+..+....+++ |+|
T Consensus 216 e~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s 291 (439)
T 2oat_A 216 ERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG 291 (439)
T ss_dssp HHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred HHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence 99884 55655554444678896 5688899999999999999999999998766555322 222222222333 999
Q ss_pred ccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++ +| +|+||+++++ ++++.+... ...+++.++++++++.+.|+
T Consensus 292 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~ 338 (439)
T 2oat_A 292 KALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALE 338 (439)
T ss_dssp GGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHH
Confidence 9987 58 9999999853 356655543 33456788999988877664
No 156
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.90 E-value=9e-23 Score=189.54 Aligned_cols=236 Identities=17% Similarity=0.153 Sum_probs=155.7
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+++.++||..|.+. ..++ .+|.+.+++.+++...... .| +.....++++.+++++ | .++|++++|+
T Consensus 63 ~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sG 131 (433)
T 1z7d_A 63 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTG 131 (433)
T ss_dssp TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred CCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence 46778899886422 1355 7899999999998753211 12 1122345555555555 2 4789999999
Q ss_pred HHHHHHHHHHHh---------cCCCCEEEecCCCCcchHH-HHHHcC------------cEEEEeeccCCCCcccCHHHH
Q 021547 120 MEAVEIILTVIT---------RLGAANILLPRPGWPFYES-FAKRNH------------IEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 120 ~~a~~~~~~~l~---------~~g~d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l 177 (311)
++|+..++..+. .+|.++|++..|+|.++.. .+...+ .++..++. .|++.|
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 204 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL 204 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998864 2454899999999987543 233333 12333332 289999
Q ss_pred Hhhc-CCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 178 EALA-DENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 178 ~~~l-~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
++.+ +++++++++...+|++|.. ++++.+++|.++|++||+++|+||+|.++.+.|.. ..+..+....+++ |+|
T Consensus 205 e~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~~~~~~~~~di~---t~s 280 (433)
T 1z7d_A 205 EEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPDVI---LLG 280 (433)
T ss_dssp HHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EEC
T ss_pred HHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hhhHhcCCCCCEE---EEC
Confidence 9988 4566665555446778975 68889999999999999999999999876555532 2222222222333 899
Q ss_pred ccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++ +| +|+||+++++ ++++.+... ...+++.++++++++.+.|+
T Consensus 281 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~ 327 (433)
T 1z7d_A 281 KALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALN 327 (433)
T ss_dssp GGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHH
Confidence 9987 79 9999999853 356655543 33456788999988877664
No 157
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.89 E-value=5.6e-23 Score=191.91 Aligned_cols=250 Identities=19% Similarity=0.113 Sum_probs=169.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||..|.+.... -..+|.+.+++.+++... ..|....+..+.+..+++++.+.++.. ..++|++|+|+++|
T Consensus 59 ~g~~ylD~~~~~~~~~l-Gh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA 134 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTV-GNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEA 134 (451)
T ss_dssp TSCEEEESSHHHHTCTT-CTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHH
T ss_pred CCCEEEEcCCCcccccc-CCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHH
Confidence 47788999877322111 124899999999998753 245544566677888888887765522 35789999999999
Q ss_pred HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCc--------------EEEEeeccC--------CCCc---ccCHHH
Q 021547 123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNHI--------------EVRHFDLLP--------ERGW---EVDLEA 176 (311)
Q Consensus 123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--------~~~~---~~d~~~ 176 (311)
++.+++.+.. +|.++|++..++|+++...+...+. .+..++... .+.. ..+++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 9999988764 4448999999999977655443321 344444321 0000 012333
Q ss_pred HHh----hcCCCccEEEEeCCCCCCc-c-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547 177 VEA----LADENTAAIVIINPCNPCG-N-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250 (311)
Q Consensus 177 l~~----~l~~~~~~i~i~~p~nptG-~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 250 (311)
+++ .+..+..+++++.|.|++| . ..+++.+++|.++|++||++||+||+|.++.+.|. ...+..+....+++
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~pdi~- 292 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA-MFACEHEGIDPDLI- 292 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE-
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc-chhhhhcCCCCCee-
Confidence 333 3334566777777766555 3 45677799999999999999999999998766554 22333333333333
Q ss_pred EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
||||.++. |+|+||++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 293 --t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 293 --VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp --EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred --eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 89999866 99999998853 466666644 34567889999999888775
No 158
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.89 E-value=8.2e-22 Score=181.91 Aligned_cols=182 Identities=17% Similarity=0.151 Sum_probs=146.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI 138 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V 138 (311)
++.++.+.+++. ... ...|... ....++++.++++++ .+++++++|+++|+..++.+++++| |+|
T Consensus 32 ~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~g-d~v 98 (412)
T 2cb1_A 32 FKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPG-DEV 98 (412)
T ss_dssp CSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTT-CEE
T ss_pred cCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEE
Confidence 566677766654 222 2356543 457889999999883 2489999999999999999999999 999
Q ss_pred EecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 139 LLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 139 l~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
+++.|.|..+... ++..|.+++.++. |+++|++.++++++++++++|+||||.+++ +++|.++|+
T Consensus 99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~ 167 (412)
T 2cb1_A 99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAE 167 (412)
T ss_dssp EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence 9999999876554 3457889888864 489999999999999999999999999998 999999999
Q ss_pred HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
++|+++|+|++|....+.. .+.. .+..+++.|+||.++.||.|+|++++.+.
T Consensus 168 ~~~~~li~D~~~~~~~~~~---~~~~----~~~di~~~S~~K~~~~~~~~~G~~~~~~~ 219 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGALC---RPLA----WGAHVVVESLTKWASGHGSVLGGAVLSRE 219 (412)
T ss_dssp HHTCEEEEECGGGTTTTSC---CGGG----GTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred HcCCEEEEECCCccccccC---Cccc----cCCeEEEECCcccccCCCCcEEEEEEecc
Confidence 9999999999998752211 1111 23459999999999999999999998764
No 159
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.89 E-value=1e-22 Score=189.88 Aligned_cols=246 Identities=15% Similarity=0.124 Sum_probs=165.2
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.++.++||+.+.+....++. +|.+.+++.+.+.... +... .+..++++.+++.+.+.++ ...++|++|+|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 46778899766432122233 7999999999886432 2111 2334566667777766543 35689999999999
Q ss_pred HHHHHHHHHhc--------CCCCEEEecCCCCcchH-HHHHHcCc------------EEEEeeccC--CCC-cccC----
Q 021547 122 AVEIILTVITR--------LGAANILLPRPGWPFYE-SFAKRNHI------------EVRHFDLLP--ERG-WEVD---- 173 (311)
Q Consensus 122 a~~~~~~~l~~--------~g~d~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~--~~~-~~~d---- 173 (311)
++++++.++.. ++ |+|++..|+|+++. ..+...|. .+..++... ..+ .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~ 200 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATK-TKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEG 200 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTC-CEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSS
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHH
Confidence 99999998864 56 99999999998764 34444431 234443321 111 1245
Q ss_pred ----HHHHHhhcC----CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547 174 ----LEAVEALAD----ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243 (311)
Q Consensus 174 ----~~~l~~~l~----~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~ 243 (311)
++.|++.++ +++ .+++++| +|+||. ..+++.+++|.++|++||++||+||+|.++.+.|.. ..+..+.
T Consensus 201 ~~~~~~~le~~l~~~~~~~~-~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~ 278 (449)
T 3a8u_X 201 GIALADELLKLIELHDASNI-AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFG 278 (449)
T ss_dssp HHHHHHHHHHHHHHHCGGGE-EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCE-EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcC
Confidence 889988876 334 4455666 578997 567999999999999999999999999876554432 2222222
Q ss_pred CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh----------hccccCCCchhHHHHHhhhh
Q 021547 244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC----------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~~~~~~l~ 309 (311)
...+++ |+||.++. | +|+||+++++ ++++.+... ...+++.++++|+++.+.|+
T Consensus 279 ~~~di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~ 343 (449)
T 3a8u_X 279 VTPDLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC 343 (449)
T ss_dssp CCCSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCCEE---EEcccccC-CCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH
Confidence 222333 88999874 7 9999999853 367777653 22356778999988877664
No 160
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.89 E-value=7.4e-23 Score=191.08 Aligned_cols=234 Identities=18% Similarity=0.137 Sum_probs=155.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.+|||+.|.+....++ .+|.+.+++.+.+.... .| .+..++++++++++.+.++ ..++|++|+|+++|
T Consensus 55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET 125 (453)
T ss_dssp TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence 3667889988854322233 78999999999987532 23 2456899999999988765 56899999999999
Q ss_pred HHHHHHH---HhcCCCCEEEecCCCCcchHHHHHH-----------cCcE------EEEeeccCCCCcccCHHHHHhhcC
Q 021547 123 VEIILTV---ITRLGAANILLPRPGWPFYESFAKR-----------NHIE------VRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
+..++.+ +.+ + +.|++..|+|+++...+.. .|.. +..++. .|++.|++.++
T Consensus 126 ~~~al~~ar~~~~-~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~ 196 (453)
T 2cy8_A 126 TLLALRVARAFTG-R-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFA 196 (453)
T ss_dssp HHHHHHHHHHHHC-C-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-C-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHH
Confidence 9999988 554 4 6888888999876543221 1221 222221 38899998876
Q ss_pred C---CccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547 183 E---NTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257 (311)
Q Consensus 183 ~---~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 257 (311)
+ ++++ ++++| +|++|.. .+++++++|.++|++||++||+||+|.++ +.+. ...+..+....++ .|+||.
T Consensus 197 ~~~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di---~s~sK~ 270 (453)
T 2cy8_A 197 NHGSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPDL---TCLAKA 270 (453)
T ss_dssp HHGGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCSE---EEEEGG
T ss_pred hcCCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCcE---EEEChh
Confidence 3 4444 55555 5779975 57999999999999999999999999987 4443 2222222222233 389999
Q ss_pred CCCCcceeeEEEeeCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++. |+|+||++++. ++++.+.. ....++++++++|+++.+.|+
T Consensus 271 l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~ 319 (453)
T 2cy8_A 271 SAG-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAID 319 (453)
T ss_dssp GGT-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHH
T ss_pred hhC-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHH
Confidence 875 99999999853 35555544 122356788999998887765
No 161
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.89 E-value=1.9e-22 Score=188.78 Aligned_cols=251 Identities=16% Similarity=0.046 Sum_probs=170.6
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.+|||+.|..... .-..+|.+.+++.+++..... .|....+..++++.+++++.+..+ ...++|++|+|+++|
T Consensus 49 ~G~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA 124 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVN-VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA 124 (460)
T ss_dssp TCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence 5788999997722111 123579999999998865322 344334555677777777776543 356799999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccC---CCCcccC------
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLP---ERGWEVD------ 173 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------ 173 (311)
++.+++++.. +|+++|++..++|+++...+...+. .+..++... .++.+++
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 9999999875 3449999999999877654443321 234443211 0112233
Q ss_pred --HHHHHhhcC----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 174 --LEAVEALAD----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 174 --~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
+++|++.+. ++++++++..++|++|. .++.+.+++|.++|++||+++|+||+|.++.+.|.. .....++...
T Consensus 205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~-~~~~~~~~~p 283 (460)
T 3gju_A 205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTM-FGSDHYGIKP 283 (460)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCCC
Confidence 578888775 34455555555677776 778888999999999999999999999987665532 2222333232
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
++ .+|||.++..++|+||++++. ++++.+.. ....+++.++++|+++.+.|+
T Consensus 284 di---~t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 284 DL---ITIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE 343 (460)
T ss_dssp SE---EEECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred Ce---eeeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 33 378999755338999999864 47777742 233467889999999988875
No 162
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=2.6e-22 Score=184.61 Aligned_cols=199 Identities=14% Similarity=0.105 Sum_probs=146.0
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEE-EeCChH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIY-ITLGCM 120 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~-~t~g~~ 120 (311)
.+..+.|+.+. .+.++.+.+++.+ .....|.+ .....++++.+++++ | ...++++ +++|++
T Consensus 9 ~~~~~~~~p~p------~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~~~~~~~s~t 72 (416)
T 3isl_A 9 TPLRTIMTPGP------VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF----Q--TKNRWAYPIDGTSR 72 (416)
T ss_dssp CCCCEECSSSS------CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT----T--CCCSEEEEEESCHH
T ss_pred cccceeecCCC------cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEecCcHH
Confidence 34556666553 3456777666544 22223332 112344555555555 4 3455555 889999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCC
Q 021547 121 EAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPC 197 (311)
Q Consensus 121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~npt 197 (311)
+++..++.+++++| |+|+++.|+|.+ +...++..|.+++.++... ++.+|+++|++.++ ++++++++++|+|||
T Consensus 73 ~al~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 149 (416)
T 3isl_A 73 AGIEAVLASVIEPE-DDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETST 149 (416)
T ss_dssp HHHHHHHHHHCCTT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHHHHHHHhcCCC-CEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCC
Confidence 99999999999999 999999999987 7778899999999998753 45789999999987 589999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
|..++ +++|.++|++||+++|+|++|+.... ...+. ..+..+++.|+||+++ .+.++|++++++
T Consensus 150 G~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~---~~~~d~~~~s~~K~l~-g~~g~g~~~~~~ 213 (416)
T 3isl_A 150 GRIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVD---EWKIDAAIGGTQKCLS-VPSGMAPITYNE 213 (416)
T ss_dssp TEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTT---TTTCSEEECCSSSTTC-CCSSEEEEEECH
T ss_pred ceecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchh---hcCCCEEEecCccccC-CCCCeEEEEECH
Confidence 99999 89999999999999999999874221 11121 1234599999999733 234589988753
No 163
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.89 E-value=8.8e-23 Score=185.77 Aligned_cols=202 Identities=10% Similarity=0.032 Sum_probs=151.4
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
++.+.|+.|. .+.++.+.+++.+.... .|.+. ....++++.+++++....+ +++++|++|+|++++
T Consensus 4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~a 71 (385)
T 2bkw_A 4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLG 71 (385)
T ss_dssp CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHH
T ss_pred ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHH
Confidence 4557777774 35567888777654321 23221 1356778888888865332 356899999999999
Q ss_pred HHHHHHHHh---cCCCCEEEec-CCCCcch-HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCC
Q 021547 123 VEIILTVIT---RLGAANILLP-RPGWPFY-ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNP 196 (311)
Q Consensus 123 ~~~~~~~l~---~~g~d~Vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~np 196 (311)
+.+++.++. ++| |+|++. .+.|..+ ...++..|.+++.++.. ..++.+|+++|++.+++ +++++++++|+||
T Consensus 72 l~~~~~~~~~~~~~g-d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 149 (385)
T 2bkw_A 72 WDIFASNFILSKAPN-KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTS 149 (385)
T ss_dssp HHHHHHHHSCTTCSC-CEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCC
Confidence 999999998 899 999887 5566655 36778899999999862 24567899999998876 7999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547 197 CGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND 272 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~ 272 (311)
||.+++ +++|.++|+++ |+++|+|++|+... ....+.. .+..+++.|+||+++ .+| +||+++++
T Consensus 150 tG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~---~~~d~~~~s~~K~~~~~~G--~G~~~~~~ 216 (385)
T 2bkw_A 150 TAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDE---WGVDFALTASQKAIGAPAG--LSISLCSS 216 (385)
T ss_dssp TTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTT---TTCSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred cCeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccccc---cCceEEEecCccccccCCc--ceEEEEcH
Confidence 999999 88999999999 99999999998421 1112222 234589999999654 466 49998854
No 164
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.89 E-value=3.3e-22 Score=180.38 Aligned_cols=199 Identities=13% Similarity=0.057 Sum_probs=146.6
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~ 124 (311)
+.++|+-|. .+.++.+.+++.+.+..+.. .|. ...+..++.+.+.+++.+.+|.. .+++|++|+|+++++.
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~ 75 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIG-VISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWE 75 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTT-TSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCcc-CcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHH
Confidence 456777663 35677888888887765432 121 22244456666666666666643 5678999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 125 IILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 125 ~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
+++.++.++ +.+++..+.|.. +...++..|.+++.++.. .++.+|+++++ ++++++++++++|+||||.+++
T Consensus 76 ~~~~~l~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~- 148 (362)
T 3ffr_A 76 RIIQNCVEK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP- 148 (362)
T ss_dssp HHHHHHCSS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC-
T ss_pred HHHHhccCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC-
Confidence 999999865 455566666652 345778889999999864 45678999998 7789999999999999999999
Q ss_pred HHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547 204 QHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND 272 (311)
Q Consensus 204 ~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~ 272 (311)
+++|.++|++| |+++|+|++|+.... ...+.. ..+++.|+||+++ .+|+ |++++++
T Consensus 149 --l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G~--g~~~~~~ 206 (362)
T 3ffr_A 149 --VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAGL--GVWILND 206 (362)
T ss_dssp --HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSCC--EEEEEEH
T ss_pred --HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCce--EEEEECH
Confidence 88899999999 999999999986331 111111 3388999999998 6774 6666643
No 165
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.89 E-value=1.2e-22 Score=185.17 Aligned_cols=197 Identities=15% Similarity=0.047 Sum_probs=146.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI 138 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V 138 (311)
.++++.+.+++.+... ..|.+ .....++++.+++++. .. ..++|++|+|+++++..++.+++++| |+|
T Consensus 32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~~----~~-~~~~v~~~~gg~~al~~~~~~~~~~g-d~v 101 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVFQ----TR-NPLTLVVSGSGHCAMETALFNLLEPG-DSF 101 (393)
T ss_dssp CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHHT----CC-CSEEEEESCCTTTHHHHHHHHHCCTT-CEE
T ss_pred CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHhC----CC-CCcEEEEeCCcHHHHHHHHHhcCCCC-CEE
Confidence 4667888888765321 12222 1234466666666663 22 23369999999999999999999999 999
Q ss_pred EecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 139 LLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 139 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
+++.+.|.+ +...++..|.+++.++... ++.+|+++|++.+++ +++++++++|+||||..++ +++|.++|++
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 176 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR 176 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence 999888853 3678888999999998743 346899999999987 8999999999999999999 8899999999
Q ss_pred hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288 (311)
Q Consensus 216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 288 (311)
||+++|+|++|+... ....+ ...+..+++.|+||+++. +.++||+++++ ++++.+..
T Consensus 177 ~~~~li~De~~~~g~----~~~~~---~~~~~d~~~~s~sK~~~~-~~g~g~~~~~~--------~~~~~~~~ 233 (393)
T 3kgw_A 177 YQCLLLVDSVASLGG----VPIYM---DQQGIDIMYSSSQKVLNA-PPGISLISFND--------KAKYKVYS 233 (393)
T ss_dssp TTCEEEEECTTTTTT----SCCCT---TTTTCCEEEEESSSTTCC-CSSCEEEEECH--------HHHHHHHT
T ss_pred cCCEEEEECCccccC----cccch---hhcCCCEEEecCcccccC-CCceeEEEECH--------HHHHHHhc
Confidence 999999999988421 11111 122345888999997632 23489998853 46666654
No 166
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.89 E-value=1.7e-22 Score=188.43 Aligned_cols=247 Identities=15% Similarity=0.049 Sum_probs=163.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||..|.+....+. .+|.+.+++.+++.... .|....+..+.++++++++.+.++. ..++|++|+|+++|
T Consensus 42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISPK--KLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSCT--TEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCchHHH
Confidence 5788999998743222222 47999999999987542 3434456667788888888876643 44799999999999
Q ss_pred HHHHHHHHhc----CC---CCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcc-----------
Q 021547 123 VEIILTVITR----LG---AANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWE----------- 171 (311)
Q Consensus 123 ~~~~~~~l~~----~g---~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~----------- 171 (311)
++.+++.+.. +| +|+|++..|+|+++...+...+. .+..++.. +.+.
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhH
Confidence 9999999875 33 49999999999876543333322 12223221 1111
Q ss_pred cCHHHHHhhcC---CCccEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 172 VDLEAVEALAD---ENTAAIVIINPC-NPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 172 ~d~~~l~~~l~---~~~~~i~i~~p~-nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
.|++.|++.++ ++++++++..++ |++| ..++.+.+++|.++|++||++||+||+|.++.+.|..+ ....+....
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~ 273 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP 273 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence 14788888876 345555555555 7787 45678889999999999999999999999876655432 223333232
Q ss_pred CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
++ .++||.++. | +|+||++++. ++++.+.. . ...+++.++++|+++.+.|+
T Consensus 274 di---~t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 274 DL---MAAGKGITG-GYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA 333 (448)
T ss_dssp SE---EEECGGGGT-TSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred CE---EEecccccC-CcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence 33 378999865 9 5999999864 47777765 3 33567889999999888775
No 167
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.89 E-value=5.2e-23 Score=188.89 Aligned_cols=218 Identities=16% Similarity=0.109 Sum_probs=151.4
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CcHH--HHHHHH-HHHhhcCCCCCCCCCEEEeC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---GLPL--ARRAVA-EYLNRDLPYKLSADDIYITL 117 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~~~--lr~~ia-~~l~~~~g~~~~~~~v~~t~ 117 (311)
+.++|+|..|.+. + ++.+.+++.+.+.......|+.+. |.+. +++.++ +++.+.+| .++++|++++
T Consensus 22 ~~~~i~~~~~~~~----~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~s 93 (407)
T 2dkj_A 22 QREGLELIASENF----V--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHS 93 (407)
T ss_dssp HHTSEECCTTCCC----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSS
T ss_pred hhcceeeccCCCC----C--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecc
Confidence 3578999999742 2 799999999887642233455332 4443 333221 23333333 2344566666
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEecCCCCcch---HHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcCC-CccEEEEeC
Q 021547 118 GCMEAVEIILTVITRLGAANILLPRPGWPFY---ESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALADE-NTAAIVIIN 192 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~-~~~~i~i~~ 192 (311)
| ++++.+++.+++++| |+|+++.|+|..+ ...++..|.++..++.. ..+++.+|++.+++.+++ +++++++++
T Consensus 94 G-t~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 171 (407)
T 2dkj_A 94 G-SQANMAVYMALMEPG-DTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGA 171 (407)
T ss_dssp H-HHHHHHHHHHHCCTT-CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECC
T ss_pred h-HHHHHHHHHHhcCCC-CEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEec
Confidence 6 569999999999999 9999999999887 34455556533334332 123578999999998874 889999989
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|+|| ...+ +++|.++|+++|+++|+|++|+. +.+.+.....+ . ..++++.|+||. ++|.|+||++++
T Consensus 172 p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~~~~ 239 (407)
T 2dkj_A 172 SAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLILSN 239 (407)
T ss_dssp SSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEEEES
T ss_pred cccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEEEEC
Confidence 9998 5566 89999999999999999999997 55544322111 1 145899999995 568899999986
Q ss_pred CCCCccchhhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~ 290 (311)
++ ++++.+....
T Consensus 240 ~~-------~~~~~l~~~~ 251 (407)
T 2dkj_A 240 DP-------ELGKRIDKLI 251 (407)
T ss_dssp CH-------HHHHHHHHHH
T ss_pred CH-------HHHHHHHhhh
Confidence 42 3677776654
No 168
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.89 E-value=3.5e-22 Score=189.47 Aligned_cols=184 Identities=15% Similarity=0.100 Sum_probs=152.2
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhcCCC-------CEEEecCCCCcchHHHH
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCMEAVEIILTVITRLGA-------ANILLPRPGWPFYESFA 152 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~~g~-------d~Vl~~~p~~~~~~~~~ 152 (311)
.|....+..++++.+++++.+.+|.+.+++++ ++|+|+++++..++.++..+|. |+|+++.|+|..+...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 45555577789999999999888876656788 9999999999999999976541 79999999999999999
Q ss_pred HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-
Q 021547 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF- 231 (311)
Q Consensus 153 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~- 231 (311)
+..|++++.++++. ++.+|++.|+++++++++++++++|+||||.+.+ +++|.++|++||+++|+|++|+.+.+
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998753 6789999999999999999999999999999998 89999999999999999999998654
Q ss_pred ----CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 232 ----GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 232 ----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
.|.+..++. ....+..+++.|++|. +.+|.++|++++.+
T Consensus 285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~ 327 (514)
T 3mad_A 285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR 327 (514)
T ss_dssp HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS
T ss_pred hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC
Confidence 122111221 1223345889999998 46778999999865
No 169
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.89 E-value=6.6e-22 Score=179.83 Aligned_cols=194 Identities=17% Similarity=0.125 Sum_probs=154.7
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEec
Q 021547 63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLP 141 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~ 141 (311)
.++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++|+..++.++ +++| |+|+++
T Consensus 15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~g-d~Vi~~ 82 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFG-DEVIVP 82 (373)
T ss_dssp HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCc-CEEEEC
Confidence 4677888888887654 36666788999999999994 247999999999999999999 8899 999999
Q ss_pred CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 142 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
.++|..+...++..|.+++.++.++ +++.+|++++++.+++++++++ |+||||...+ +++|.++|+++|+++|
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li 155 (373)
T 3frk_A 83 SNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLI 155 (373)
T ss_dssp TTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEE
T ss_pred CCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEE
Confidence 9999999999999999999998754 4578999999999988888877 6789999888 8899999999999999
Q ss_pred EeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 222 ADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 222 ~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
+|++|+.. .+++.... .+. .+.+.||| |.++.+|. .|+++++++ ++.++++...
T Consensus 156 ~D~a~~~g~~~~~~~~~---~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~~-------~~~~~~~~~~ 212 (373)
T 3frk_A 156 EDAAQAHGSLYKGMKVG---SLG----DAAGFSFYPAKNLGSLGD-GGAVVTNDK-------DLAEKIKALS 212 (373)
T ss_dssp EECTTCTTCEETTEETT---SSS----SEEEEECCTTSSSCCSSS-CEEEEESCH-------HHHHHHHHHH
T ss_pred EECCcccCCEECCEecc---ccc----cEEEEeCcCCCccCccce-eEEEEeCCH-------HHHHHHHHHH
Confidence 99999853 33332211 111 27888977 88655454 788887543 3666666543
No 170
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.89 E-value=8.9e-22 Score=180.51 Aligned_cols=191 Identities=14% Similarity=0.166 Sum_probs=151.8
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCC--cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEe
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFG--LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILL 140 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~ 140 (311)
++++.+++.+.+.. .|.++.| ..++|++++++++ .+++++|+|+++++.+++.++ +++| |+|++
T Consensus 11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~g-d~Vl~ 77 (394)
T 1o69_A 11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQD-DIVLA 77 (394)
T ss_dssp -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEE
T ss_pred CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCC-CEEEE
Confidence 35678888888764 3555557 8999999999993 268999999999999999999 8899 99999
Q ss_pred cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
+.|+|..+...++..|.+++.++++ .++.+|++.+++.+++ +++++++++ |+|...+ +++|.++|+++|
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~ 149 (394)
T 1o69_A 78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKEND 149 (394)
T ss_dssp ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcC
Confidence 9999999999999999999999875 5678999999998875 688988885 8998776 999999999999
Q ss_pred CEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 218 ILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 218 ~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
+++|+|++|. ++.+.+.+... +. . +.+.|+||..+++|.|+||++++++ +++++++..
T Consensus 150 ~~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~~-------~l~~~l~~~ 208 (394)
T 1o69_A 150 IVLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKNK-------EKIEKARFY 208 (394)
T ss_dssp CEEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESCH-------HHHHHHHHH
T ss_pred CEEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECCH-------HHHHHHHHH
Confidence 9999999999 56555432211 11 1 4555664444556789999998543 367777655
No 171
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.89 E-value=3.2e-22 Score=188.04 Aligned_cols=249 Identities=16% Similarity=0.128 Sum_probs=174.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.+|||..|......+ ..+|.+.+++.+++..... +....+..+.+.++++++.+.++. ..++|++++|+++|
T Consensus 52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA 126 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLPY--ASPWYMATSPAARLAEKIATLTPG--DLNRIFFTTGGSTA 126 (476)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCCC--CCTTTCBCHHHHHHHHHHHTTSST--TCCEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccC--cccCccCCHHHHHHHHHHHhcCCC--CcCEEEEeCchHHH
Confidence 578899998773211111 2589999999999875321 222246678899999999887653 44689999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCC-CCcccC--------
Q 021547 123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPE-RGWEVD-------- 173 (311)
Q Consensus 123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~d-------- 173 (311)
++.+++.+.. +|+++|++..|.|.++...+...+.. +..++.... ..+..+
T Consensus 127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (476)
T 3i5t_A 127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDL 206 (476)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHH
Confidence 9999999864 34489999999999876555543321 222221110 001122
Q ss_pred HHHHHhhcC----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc-ccCCCCC
Q 021547 174 LEAVEALAD----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-VFGSIVP 247 (311)
Q Consensus 174 ~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~-~~~~~~~ 247 (311)
+++|++.++ ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|.++.+.|.. .... .+...++
T Consensus 207 ~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~-~~~~~~~~v~pd 285 (476)
T 3i5t_A 207 VQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEW-FASEKVFGVVPD 285 (476)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHTTCCCCS
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCc-eeeecccCCCcc
Confidence 678888775 34566666666788885 788899999999999999999999999988666642 2223 3333334
Q ss_pred eEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547 248 VITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 248 ~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~ 309 (311)
++ ++||.++. | +|+|+++++. ++++.+... ...+++.++++|+++.+.|+
T Consensus 286 i~---t~sK~l~~-G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 344 (476)
T 3i5t_A 286 II---TFAKGVTS-GYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIE 344 (476)
T ss_dssp EE---EECGGGGT-TSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred hh---hhhhhhcC-CCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence 44 68899875 8 9999999853 477777642 33567889999999988775
No 172
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.89 E-value=2.7e-21 Score=180.47 Aligned_cols=203 Identities=15% Similarity=0.047 Sum_probs=160.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC---CCEEEeCChHHHHHHHHHHHhc-----
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA---DDIYITLGCMEAVEIILTVITR----- 132 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~---~~v~~t~g~~~a~~~~~~~l~~----- 132 (311)
.+.++.+.+++.+.+..+.. +|...++..++++.+.+++.+.+|.+... ..+++|+|+++++..++.++..
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~-~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWI-DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCC-ChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 34568888998888754333 56666688889999999999888865432 2489999999999999888754
Q ss_pred ---CC----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547 133 ---LG----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205 (311)
Q Consensus 133 ---~g----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~ 205 (311)
+| .++|+++. .|..+...++..|++++.+++++ +++.+|+++|++.+++++++|++++|+||||.+.+
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~--- 205 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF--- 205 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---
Confidence 44 26999999 99999999999999999998753 36889999999999999999999999999999988
Q ss_pred HHHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 206 LQKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 206 l~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
+++|.++|+++ |+++++|++|+.+.. .+.....+ ...+-.+++.|++| |++.|.++||+++.++
T Consensus 206 l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~ 278 (452)
T 2dgk_A 206 PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHK-FGLAPLGCGWVIWRDE 278 (452)
T ss_dssp HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTT-TTCCCSSCEEEEESSG
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECccc-ccCCCCCeEEEEEcCH
Confidence 89999999996 999999999998642 22111111 11123467779999 5788999999999654
No 173
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.88 E-value=9e-23 Score=190.80 Aligned_cols=250 Identities=14% Similarity=0.045 Sum_probs=167.6
Q ss_pred CCC--CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPR--PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~--~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++ .+|||..|......+ ..+|.+.+++.+++.... .+....+..+....+++.+.+.++ ...++|++|+|++
T Consensus 71 dG~~~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGs 145 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMN--HVMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGS 145 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCS--CCCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHH
T ss_pred CCCeeEEEECCCcHhhhccC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHH
Confidence 466 889998763211112 268999999999887532 121111222344444444444333 3456999999999
Q ss_pred HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC--------------cEEEEeeccCCCCcccCHHHHHh
Q 021547 121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH--------------IEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
+|++.+++.+.. +|.+.|++..+.|.++...+...+ .....++.........|++.|++
T Consensus 146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~ 225 (457)
T 3tfu_A 146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEA 225 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHH
Confidence 999999998875 664689999999987654444431 12333333221112247888988
Q ss_pred hcC---CCccEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547 180 LAD---ENTAAIVIIN-PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI 254 (311)
Q Consensus 180 ~l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 254 (311)
.++ ++++++++.. ++|++|..+ +.+.+++|.++|++||+++|+||+|.++.+.|.. ..+..+....+++ +|
T Consensus 226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~-~a~~~~~~~pdii---t~ 301 (457)
T 3tfu_A 226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGAL-FAADHAGVSPDIM---CV 301 (457)
T ss_dssp HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EE
T ss_pred HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccch-hHhHhcCCCceEE---EE
Confidence 886 5667777777 789999866 7778999999999999999999999987665542 2333333333444 89
Q ss_pred cccCCCCcceeeEEEeeCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
||.++...+|+||++++. ++++.+.. ....+++.++++|+++.+.|+
T Consensus 302 sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~ 354 (457)
T 3tfu_A 302 GKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVE 354 (457)
T ss_dssp CGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred ChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHH
Confidence 998654227999999864 47777741 233467889999999888775
No 174
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.88 E-value=2.2e-21 Score=176.02 Aligned_cols=193 Identities=14% Similarity=0.113 Sum_probs=152.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH---hcCCCCEE
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI---TRLGAANI 138 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l---~~~g~d~V 138 (311)
++++.+.+++.+.+... .|.+.....++|++++++++. +++++|+|+++++..++.++ +++| |+|
T Consensus 10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~~~ggt~al~~~~~~~~~~~~~g-d~V 77 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALVFNSATSALLTLYRNFSEFSADR-NEI 77 (375)
T ss_dssp CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHSSCCCTTS-CEE
T ss_pred CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHhcccCCCC-CEE
Confidence 46789999999988643 234455678999999999942 38999999999999999999 8899 999
Q ss_pred EecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 139 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
+++.|+|..+...++..|++++.+++++. ..+|++.+++.+++++++++++++ ||...+ +++|.++|+++|+
T Consensus 78 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~ 149 (375)
T 2fnu_A 78 ITTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSL 149 (375)
T ss_dssp EECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTC
T ss_pred EECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCC
Confidence 99999999999999999999999987543 368999999999888888888876 999988 8999999999999
Q ss_pred EEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 219 LVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 219 ~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++|+|++|+....... ..+..+ + .+.+.|+| |.++. | +|++++.+. ++++++++..
T Consensus 150 ~li~D~a~~~~~~~~~--~~~~~~---~-~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~ 207 (375)
T 2fnu_A 150 SFLSDSSHALGSEYQN--KKVGGF---A-LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLF 207 (375)
T ss_dssp EEEEECTTCTTCEETT--EETTSS---S-SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHH
T ss_pred EEEEECccccCCeECC--eecccc---C-CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHH
Confidence 9999999986432111 111111 1 37888888 99855 6 788887432 1366666654
No 175
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=1.7e-22 Score=186.07 Aligned_cols=214 Identities=15% Similarity=0.101 Sum_probs=143.3
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
..|+|..+. .+.++.+.+++.+.+....... |.......++++.+.+++.+.+| .++++|++++|
T Consensus 26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG- 96 (417)
T 3n0l_A 26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG- 96 (417)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence 567776654 2348899999988774321112 22223334566544445544444 35566888777
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcC--cEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNH--IEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINP 193 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p 193 (311)
++++.+++.+++++| |+|+++.|+|..+.. .....| ..++.++.+ .++.+|++.|++.++ .+++++++++|
T Consensus 97 t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~ 173 (417)
T 3n0l_A 97 SQANQGVYAALINPG-DKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGAS 173 (417)
T ss_dssp HHHHHHHHHHHSCTT-CEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHHHhcCCC-CEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCc
Confidence 799999999999999 999999999987544 333333 344555443 567799999999887 58999988887
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+| |..++ +++|.++|++||++||+|++|. ++.+.+..+..+. ...|++.|+||.+ +|+|.||+++++
T Consensus 174 ~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~ 241 (417)
T 3n0l_A 174 AY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND 241 (417)
T ss_dssp SC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC
T ss_pred cc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC
Confidence 76 88888 9999999999999999999964 4444443332322 1238999999985 788999999864
Q ss_pred CCCccchhhHHHHHhhhh
Q 021547 273 PNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~ 290 (311)
+ ++++.+....
T Consensus 242 ~-------~~~~~~~~~~ 252 (417)
T 3n0l_A 242 E-------ELAKKINSAI 252 (417)
T ss_dssp H-------HHHHHHHHHH
T ss_pred H-------HHHHHHhhhh
Confidence 3 3777776654
No 176
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=3.4e-21 Score=177.78 Aligned_cols=183 Identities=11% Similarity=0.087 Sum_probs=141.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~ 162 (311)
+...++++.++++++ .+++++++|+++|+.+++.+++++| |+|+++.+.|.+....+ +..|++++.+
T Consensus 82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v 152 (415)
T 2fq6_A 82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQG-DHVLMTNTAYEPSQDFCSKILSKLGVTTSWF 152 (415)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTT-CEEEEETTSCHHHHHHHHHTGGGGTCEEEEE
T ss_pred chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCcEEEEE
Confidence 346779999999883 2457778899999999999999999 99999999999876543 4578998888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMG 240 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~ 240 (311)
+.. |++++++++++++++|++++|+||+|.+++ +++|+++|++ +|+++|+|++|+...+ . .++.
T Consensus 153 ~~~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~---~p~~ 218 (415)
T 2fq6_A 153 DPL-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F---KALD 218 (415)
T ss_dssp CTT-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S---CGGG
T ss_pred CCC-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C---Cccc
Confidence 642 889999999999999999999999999998 8999999999 9999999999986432 1 1221
Q ss_pred ccCCCCCeEEEecCcccCCCCcce-eeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHH
Q 021547 241 VFGSIVPVITLGSISKRWIVPGWR-FGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCE 304 (311)
Q Consensus 241 ~~~~~~~~i~i~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 304 (311)
+ +..+++.|+||.++.+|.+ .||+++++ + ++++++.... .....+++.++.+
T Consensus 219 -~---g~Div~~S~sK~lg~~g~~~~G~l~~~~-~-------~~~~l~~~~~~~G~~~~~~~a~~~ 272 (415)
T 2fq6_A 219 -F---GIDVSIQAATKYLVGHSDAMIGTAVCNA-R-------CWEQLRENAYLMGQMVDADTAYIT 272 (415)
T ss_dssp -G---TCSEEEEETTTTTTCSSSCCCEEEEECT-T-------THHHHHHHHHHTTCCCCHHHHHHH
T ss_pred -c---CCeEEEEeCccccCCCCCceEEEEEeCH-H-------HHHHHHHHHHhcCCCCCHHHHHHH
Confidence 2 2349999999999999866 58888653 2 4455554432 2334455544443
No 177
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.88 E-value=1.7e-22 Score=187.37 Aligned_cols=243 Identities=18% Similarity=0.071 Sum_probs=161.6
Q ss_pred CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+++.++||+.|..... ++ .+|.+.+++.+++.......| +.....++++++++++. ..++|++|+|+++
T Consensus 51 ~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~~~~Gse 120 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERVP-------SIEIVRMVNSGTE 120 (429)
T ss_dssp TCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEEESSHHH
T ss_pred CCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhCC-------CCCEEEEeCChHH
Confidence 5788999998853321 33 689999999999876443233 34456677777777762 4679999999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcc------------cCHHHHHhhcCC--C
Q 021547 122 AVEIILTVITR--LGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWE------------VDLEAVEALADE--N 184 (311)
Q Consensus 122 a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~~--~ 184 (311)
+++.++..+.. .+ ++|++..|+|.++...+.. .|.....+......+.. -|++.|++.++. +
T Consensus 121 a~~~ai~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (429)
T 3k28_A 121 ATMSALRLARGYTGR-NKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD 199 (429)
T ss_dssp HHHHHHHHHHHHHTC-CEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhCC-CEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence 99999988764 45 8999999998765432221 22111111111001100 178899888762 2
Q ss_pred ccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547 185 TAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262 (311)
Q Consensus 185 ~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 262 (311)
..++++++| +|++|... +++.+++|.++|++||+++|+||+|.++ ..|.. .....+....+ +.++||.|++ |
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~~-G 273 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-CGQGYYGVTPD---LTCLGKVIGG-G 273 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-T
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hHHHHhCCCCc---eehhhhhhcC-C
Confidence 334455555 55666655 6788999999999999999999999987 55432 22222222222 3479999964 9
Q ss_pred ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhhc
Q 021547 263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLVN 310 (311)
Q Consensus 263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~ 310 (311)
+|+||++++. ++++.+... ...++++++++|+++.+.|+.
T Consensus 274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~ 317 (429)
T 3k28_A 274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ 317 (429)
T ss_dssp SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT
T ss_pred CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHH
Confidence 9999998853 366666542 234578899999999888763
No 178
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.88 E-value=3.2e-22 Score=185.30 Aligned_cols=236 Identities=16% Similarity=0.086 Sum_probs=159.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.|.+....+ ..+|.+.+++.+.+..... |.. ..+.++.+++++.+.++ ..++|++|+|++++
T Consensus 50 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea 120 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA 120 (427)
T ss_dssp TSCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 478899999885432211 2689999999999875432 322 23566677777766555 56899999999999
Q ss_pred HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHc-Cc-------------------EEEEeeccCCCCcccCHHHHHhh
Q 021547 123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRN-HI-------------------EVRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------------~~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
++.++.... ..+ ++|++..|+|+++...+... +. .+..++. -|+++|++.
T Consensus 121 ~~~al~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~ 192 (427)
T 3fq8_A 121 CMAVLRIMRAYTGR-DKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL 192 (427)
T ss_dssp HHHHHHHHHHHHCC-CEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhCC-CEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence 999985443 234 78999988987643322111 11 1222221 188999988
Q ss_pred cCC---CccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547 181 ADE---NTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256 (311)
Q Consensus 181 l~~---~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 256 (311)
+++ +++++++..++|++|.+.+ .+.+++|.++|++||++||+||+|.++ +.|.. .....+....+ +.|+||
T Consensus 193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK 267 (427)
T 3fq8_A 193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGK 267 (427)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECG
T ss_pred HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhh
Confidence 764 4555565556777887665 555999999999999999999999987 54432 12222222222 458899
Q ss_pred cCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++ +|+|+||++++. ++++.+... ...++++++++++++.+.|+
T Consensus 268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~ 315 (427)
T 3fq8_A 268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE 315 (427)
T ss_dssp GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHH
Confidence 998 799999998743 466666542 23356779999998887764
No 179
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.88 E-value=1.3e-21 Score=180.16 Aligned_cols=196 Identities=13% Similarity=0.051 Sum_probs=143.0
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-----P---MFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-----~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++.+.|+.+.+. +.++.+.+++.+.+..... .+. + .....++++.+++++ | .++++|++|
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~ 94 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVT 94 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEEC
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHh-ccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEe
Confidence 567888887632 5678899999998864311 111 0 123345666666555 3 356799999
Q ss_pred CChHHHHHHHHHHHh------cCCCCE-EEecCCCCcchHHH----HHHc--CcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 117 LGCMEAVEIILTVIT------RLGAAN-ILLPRPGWPFYESF----AKRN--HIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~------~~g~d~-Vl~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+|+++++..++.++. ++| |+ |++..+.|+.+... .+.. |.+++.++. +++|++.+++
T Consensus 95 ~g~t~al~~al~~~~~~~~~~~~g-d~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~ 164 (416)
T 1qz9_A 95 DTTSINLFKVLSAALRVQATRSPE-RRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ 164 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSTT-CCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST
T ss_pred CChhHHHHHHHHhhcccccccCCC-CcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC
Confidence 999999998888876 788 86 55556788765433 3333 888888764 6888888888
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
+++++++++|+||||..++ +++|.++|+++|+++|+|++|+. |.....+..+. ..+++.|+||.+ .+|.
T Consensus 165 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~l-~~g~ 233 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAG---ADYAIGCTYKYL-NGGP 233 (416)
T ss_dssp TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHT---CSEEEECSSSTT-CCCT
T ss_pred CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcC---CCEEEecCcccC-CCCC
Confidence 9999999999999999999 89999999999999999999984 21112222222 348899999985 4577
Q ss_pred ee-eEEEeeCC
Q 021547 264 RF-GWLATNDP 273 (311)
Q Consensus 264 r~-G~i~~~~~ 273 (311)
++ |++++++.
T Consensus 234 ~~~g~l~~~~~ 244 (416)
T 1qz9_A 234 GSQAFVWVSPQ 244 (416)
T ss_dssp TCCCEEEECTT
T ss_pred CCeEEEEECHH
Confidence 77 99998653
No 180
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.88 E-value=6.5e-22 Score=183.61 Aligned_cols=234 Identities=16% Similarity=0.067 Sum_probs=156.1
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||+.|.+....++ .+|.+.+++.+.+.......|. .++++.+++++.+.++ ..++|++|+|+++|
T Consensus 54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA 124 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA 124 (434)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 4678899988854322223 6899999999998764322332 2344444444444332 46799999999999
Q ss_pred HHHHHHH---HhcCCCCEEEecCCCCcchHHHHH--------------HcCc------EEEEeeccCCCCcccCHHHHHh
Q 021547 123 VEIILTV---ITRLGAANILLPRPGWPFYESFAK--------------RNHI------EVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
+.++++. +. .+ ++|++..|+|+++...+. ..|+ .+..++. .|++.|++
T Consensus 125 ~~~al~~ar~~~-~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~ 195 (434)
T 2epj_A 125 TMTAIRLARGYT-GR-DLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALER 195 (434)
T ss_dssp HHHHHHHHHHHH-CC-CEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHH
T ss_pred HHHHHHHHHHhh-CC-CeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHH
Confidence 9999987 43 45 688888899986533221 1122 2333332 27899998
Q ss_pred hcCC---CccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547 180 LADE---NTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI 254 (311)
Q Consensus 180 ~l~~---~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 254 (311)
.+++ ++++ ++++| +|++|.++ +++.+++|.++|++||+++|+||+|.++ ..|. ...+..+....+ +.|+
T Consensus 196 ~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~ 269 (434)
T 2epj_A 196 VFAEYGDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFNIEGD---IIVL 269 (434)
T ss_dssp HHHHHGGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHTCCCS---EEEE
T ss_pred HHHhCCCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhCCCCC---eeee
Confidence 8763 4444 55555 57899866 7999999999999999999999999977 3332 112222222223 3489
Q ss_pred cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
||.++. |+|+||++++. ++++.+... ...+++.++++++++.+.|+
T Consensus 270 sK~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~ 319 (434)
T 2epj_A 270 GKIIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLK 319 (434)
T ss_dssp EGGGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred cchhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 999876 99999999853 366665541 22356788999988877664
No 181
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.88 E-value=2.8e-22 Score=181.03 Aligned_cols=212 Identities=16% Similarity=0.104 Sum_probs=150.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
.-..+.++.+.. .++++|.+.+++.+.+. ...|.+..+..++++++++++.. +..++++|+++++
T Consensus 12 ~~~~~~~~~~~~----~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~g~~a~ 76 (359)
T 3pj0_A 12 KTPYKLGGNGPR----NVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILGK--------QSAVFFPSGTMAQ 76 (359)
T ss_dssp TCSEESSSSSCC----BHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHTC--------SEEEEESCHHHHH
T ss_pred hcchhhcCCCcc----ccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhCC--------CcEEEeCCHHHHH
Confidence 345555555542 24567888888877443 23577767889999999999842 2335568888999
Q ss_pred HHHHHHHhcCCCCE--EEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC-
Q 021547 124 EIILTVITRLGAAN--ILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC- 197 (311)
Q Consensus 124 ~~~~~~l~~~g~d~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt- 197 (311)
.+++.+++.+| |+ |+++.+.|..+. ......|.+++.++. +++.+|++++++. .++++++++++|+||+
T Consensus 77 ~~a~~~~~~~g-~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~ 151 (359)
T 3pj0_A 77 QIALRIWADRK-ENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIG 151 (359)
T ss_dssp HHHHHHHHHHH-TCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGT
T ss_pred HHHHHHHHhcC-CCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCC
Confidence 99999999888 76 555555554322 223567899888865 4568999999998 7789999999999988
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCC
Q 021547 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNG 275 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~ 275 (311)
|.+++.+++++|+++|++||++||+|++|.... +.+.+...+. ...+ +++.|+||.++.++. ||++.+ +
T Consensus 152 G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~-~-- 222 (359)
T 3pj0_A 152 GQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIAG--AILAGN-D-- 222 (359)
T ss_dssp SBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSSC--EEEEEC-H--
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcce--EEEECC-H--
Confidence 799999999999999999999999999987533 2222222221 1112 556799998877632 666653 2
Q ss_pred ccchhhHHHHHhhh
Q 021547 276 VLQKSGIVGSIKAC 289 (311)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (311)
+++++++..
T Consensus 223 -----~l~~~~~~~ 231 (359)
T 3pj0_A 223 -----DFVQEAKIW 231 (359)
T ss_dssp -----HHHHHHHHH
T ss_pred -----HHHHHHHHH
Confidence 477777654
No 182
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.88 E-value=2.9e-21 Score=181.45 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=154.1
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
.++.|+ +.. ....|.+.+++.+... .++.|.+ ..|..++++.+++++.+.+|.+. .+++++|++++
T Consensus 67 ~~~~lg-~~~-----~~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCT-----MKYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTC-----CCCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred Cccccc-ccc-----ccCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence 567777 421 1223455666655422 2334543 55777888999999888777543 36788999999
Q ss_pred HHHHHHHH----hcCCCC-----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547 123 VEIILTVI----TRLGAA-----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193 (311)
Q Consensus 123 ~~~~~~~l----~~~g~d-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p 193 (311)
+..++.++ .++| | +|+++.++|..+...++..|++++.++.+ .++.+|+++|++.++++++++++++|
T Consensus 136 ~~~al~~~~~~~~~~G-d~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRG-EGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP 212 (474)
T ss_dssp HHHHHHHHHHHHHHTT-CTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS
T ss_pred HHHHHHHHHHHHHhcC-CccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC
Confidence 98766554 3577 7 99999999999999999999999999874 45789999999999989999999998
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-c---ceeeEEE
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-G---WRFGWLA 269 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G---~r~G~i~ 269 (311)
||+|.+. +++++|.++|+++|+++|+|++|....++. .....+ +..+++.|+||+|+.| | .|+||++
T Consensus 213 -n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 213 -NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVG 283 (474)
T ss_dssp -CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred -CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccC---CCcEEEEeCccccccCCCCCCCCeEEEE
Confidence 6899883 249999999999999999999998655421 122222 2448889999999877 4 6999999
Q ss_pred eeC
Q 021547 270 TND 272 (311)
Q Consensus 270 ~~~ 272 (311)
+++
T Consensus 284 ~~~ 286 (474)
T 1wyu_B 284 VKA 286 (474)
T ss_dssp ECG
T ss_pred EcH
Confidence 865
No 183
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.88 E-value=8.1e-22 Score=182.43 Aligned_cols=234 Identities=15% Similarity=0.092 Sum_probs=159.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.+|||+.|.+....++ .+|.+.+++.+.+.... .|. +..++++.+++++.+.++ ..++|++++|+++|
T Consensus 50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA 120 (424)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 4677899998753322233 68999999999987642 232 234566666666666554 46899999999999
Q ss_pred HHHHHHH---HhcCCCCEEEecCCCCcchHHHHHH--------------cCc------EEEEeeccCCCCcccCHHHHHh
Q 021547 123 VEIILTV---ITRLGAANILLPRPGWPFYESFAKR--------------NHI------EVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
+..+++. +. .+ +.|++..|+|+++...+.. .|+ ++..++. .|++.|++
T Consensus 121 ~~~al~~ar~~~-~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~ 191 (424)
T 2e7u_A 121 TMSALRLARGYT-GR-PYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLRE 191 (424)
T ss_dssp HHHHHHHHHHHH-CC-CEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHhh-CC-CEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHH
Confidence 9999886 43 45 6899999999875432211 121 2333332 37899988
Q ss_pred hcCC--CccEEEEeCCCC-CCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547 180 LADE--NTAAIVIINPCN-PCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255 (311)
Q Consensus 180 ~l~~--~~~~i~i~~p~n-ptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 255 (311)
.+++ +..++++++|+| ++|.++ +++.+++|.++ ++||++||+||+|.++ ..|.. ..+..+....++ .|+|
T Consensus 192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~s 265 (424)
T 2e7u_A 192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLG 265 (424)
T ss_dssp HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEEC
T ss_pred HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhh
Confidence 8763 334566667765 489765 79999999999 9999999999999987 33422 122222222233 3999
Q ss_pred ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
|.++. |+|+||+++++ ++++.+... ...+++.|+++|+++.+.|+
T Consensus 266 K~l~~-G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 314 (424)
T 2e7u_A 266 KILGG-GLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLE 314 (424)
T ss_dssp GGGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHH
T ss_pred hhhhC-CcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHH
Confidence 99984 99999999853 366666541 22356788999988877664
No 184
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.88 E-value=1.2e-21 Score=183.96 Aligned_cols=251 Identities=14% Similarity=0.076 Sum_probs=170.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|......+ ..+|.+.+++.+++..... .|....+..+.+..+++.+.+..+ ...++|++++|+++
T Consensus 52 ~~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGse 127 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSE 127 (472)
T ss_dssp TTCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHH
Confidence 3578899998772211112 2589999999999875432 233333445666677777766544 34579999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc------------EEEEeeccC--C-CCcccC------
Q 021547 122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI------------EVRHFDLLP--E-RGWEVD------ 173 (311)
Q Consensus 122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------ 173 (311)
|++.+++.+.. +|.++|++..+.|.++...+...+. .+..++... . .++ .+
T Consensus 128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~ 206 (472)
T 3hmu_A 128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL 206 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence 99999999875 3438999999999987654444332 233443211 0 111 23
Q ss_pred --HHHHHhhcC----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547 174 --LEAVEALAD----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 174 --~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~ 246 (311)
++.|++.++ ++++++++..+++++|.+. +++.+++|.++|++||+++|+||+|.++...|. ......+...+
T Consensus 207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~a~~~~~v~p 285 (472)
T 3hmu_A 207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN-WFGTQTMGIRP 285 (472)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc-cchhHHhCCCC
Confidence 677888775 3444445445567777755 888899999999999999999999998766653 22223333333
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh---hhccccCCCchhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA---CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++ ++||.++..|+|+||++++. ++++.+.. ....+++.++++|+++.+.|+
T Consensus 286 di~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 286 HIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLR 340 (472)
T ss_dssp SEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred cee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence 344 68899877669999999853 47777732 133467889999999988775
No 185
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=1.6e-21 Score=177.89 Aligned_cols=198 Identities=16% Similarity=0.182 Sum_probs=152.8
Q ss_pred CCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH-HHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCE
Q 021547 60 CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAV-AEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAAN 137 (311)
Q Consensus 60 ~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~ 137 (311)
.+++++.+.+++.+.+.++.+..|. ....++++++ +++++ ..+++++++|+++++.+++.++ +++| |+
T Consensus 11 ~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~G-d~ 80 (377)
T 3ju7_A 11 STVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKG-KY 80 (377)
T ss_dssp CCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTC-CE
T ss_pred CCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCc-CE
Confidence 4788899999999998876432233 3578999999 99883 1467899999999999999998 8999 99
Q ss_pred EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCC--ccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DEN--TAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~--~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
|+++.|+|..+...++..|++++.+++++ +++.+|++++++.+ +++ +++++ |+||+|...+ +++|.++|+
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~ 153 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK 153 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh
Confidence 99999999999999999999999998753 46789999999987 556 77776 6788999988 888999999
Q ss_pred HhCCEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 215 KLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 215 ~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
+|++||+|++|+... +.+.+.. ..+. .+.+.|| +|.++. | +.|+++++++ ++.++++...
T Consensus 154 -~~~~vi~D~a~a~g~~~~~~~~g--~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~~-------~l~~~~~~~~ 216 (377)
T 3ju7_A 154 -KGVPVVVDAAPGFGLMNGGMHYG--QDFS----GMIIYSFHATKPFGI-G-EGGLIYSKNE-------EDIQRIKRMG 216 (377)
T ss_dssp -TTCCBEEECTTCTTCEETTEETT--TTCS----SEEEEECBTTSSSCC-B-SCEEEEESCH-------HHHHHHHHHT
T ss_pred -cCCEEEEECCCccCCeECCEecc--CCCC----cEEEEECCCCCcCCC-C-CcEEEEECCH-------HHHHHHHHHH
Confidence 999999999998532 2222110 1111 1555564 698775 5 6788887653 4667766653
No 186
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.87 E-value=9.8e-23 Score=184.04 Aligned_cols=197 Identities=12% Similarity=0.016 Sum_probs=140.0
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
.+++|+.|. .++|+.+++++.+.+... ....|.. ..+..++.+.+.+++.+.+|.. .+++|++|+|+
T Consensus 3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~ 75 (360)
T 1w23_A 3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG 75 (360)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence 467888775 367899999999887531 0111211 2233334444444444444443 35789999999
Q ss_pred -HHHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh-hcCCCccEEEEeCCC
Q 021547 120 -MEAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPC 194 (311)
Q Consensus 120 -~~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~i~i~~p~ 194 (311)
++++.+++.+++.+ | |.|+++.++|..+ ..++..| +++.++++++++ .+|++++++ .++++++++++++|+
T Consensus 76 gt~al~~~~~~l~~~~~~g-~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~ 151 (360)
T 1w23_A 76 ASLQFTMLPMNLLTKGTIG-NYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNN 151 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEE-EEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEE
T ss_pred chHHHHHHHHHhcCCCCcc-cEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCC
Confidence 99999999999865 5 6777777776543 4467789 999998754333 478899998 888899999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
||||.+++ ++. +++|+++|+|++|+.+.. ...+..+ .++++|+||.|+.+| +||+++++
T Consensus 152 nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~ 210 (360)
T 1w23_A 152 TIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK 210 (360)
T ss_dssp TTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH
T ss_pred CCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH
Confidence 99999987 333 279999999999986432 1233333 288999999998666 99999864
No 187
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.87 E-value=6.6e-22 Score=178.57 Aligned_cols=181 Identities=14% Similarity=0.092 Sum_probs=133.5
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC--EEEecCCCCcchHH---HHHHc
Q 021547 81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA--NILLPRPGWPFYES---FAKRN 155 (311)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d--~Vl~~~p~~~~~~~---~~~~~ 155 (311)
..|++..+..++++++++++.. +..++++|+++++.+++.+++.+| | .|+++.+.|..+.. .....
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~~--------~~~i~~~~G~~a~~~al~~~~~~g-d~~~vi~~~~~~~~~~~~~~~~~~~ 111 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLGM--------DDAVFFPSGTMAQQVALRIWSDET-DNRTVAYHPLCHLEIHEQDGLKELH 111 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHHHHHH-TCCEEEECTTCHHHHSSTTHHHHHS
T ss_pred ccccCChHHHHHHHHHHHHhCC--------CcEEEecCcHHHHHHHHHHHhhcC-CCcEEEecccceeeeeccchhhhcc
Confidence 3577777899999999999942 334555778889999999999888 7 67777776554322 45667
Q ss_pred CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--CccC
Q 021547 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--LAFG 232 (311)
Q Consensus 156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~~ 232 (311)
|.+++.++. +++.+|++++++.. +++++++++|+||| |.+++.+++++|+++|++||++||+|++|.. ..+.
T Consensus 112 g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 186 (357)
T 3lws_A 112 PIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYY 186 (357)
T ss_dssp SCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHH
T ss_pred CcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhc
Confidence 888888763 34579999999974 38999999999998 9999999999999999999999999999872 1122
Q ss_pred CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 233 STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 233 ~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
+.+...+. ...+ +++.|+||.|+.++. ||++.+. ++++.++..
T Consensus 187 ~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~~--------~~~~~~~~~ 229 (357)
T 3lws_A 187 EKTAAEIA---GLFD-SIYISFYKGLGGIAG--AILAGPA--------AFCQTARIW 229 (357)
T ss_dssp TCCHHHHH---TTSS-EEEEESSSTTCCSSC--EEEEECH--------HHHHHHHHH
T ss_pred CCChHHHH---hcCC-EEEEeccccCCCCce--EEEEcCH--------HHHHHHHHH
Confidence 22222221 1112 458899999844432 8887642 467776654
No 188
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.87 E-value=5.4e-21 Score=177.10 Aligned_cols=158 Identities=19% Similarity=0.138 Sum_probs=131.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF 162 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~ 162 (311)
+...++++.+++++. .+..++++++++|+.+++.+++++| |+|+++.|.|.++.. .++..|++++.+
T Consensus 82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v 152 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAG-DSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV 152 (430)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 456788888888883 2346677777899999999999999 999999999998776 677899999998
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+ ..+. .
T Consensus 153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~~~~-~- 216 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----LEAK-R- 216 (430)
T ss_dssp CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----CCGG-G-
T ss_pred CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChH-H-
Confidence 763 899999999999999999999999999998 88999999999999999999986432 1111 1
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
.+..+++.|+||.++.+|..+|.+++.
T Consensus 217 --~g~div~~S~sK~l~g~g~~~gG~vv~ 243 (430)
T 3ri6_A 217 --LGVDIEVLSSTKFISGGGTSVGGVLID 243 (430)
T ss_dssp --GTCSEEEEECCCEEETTEEECCEEEEE
T ss_pred --cCCEEEEECCcccccCCCCceEEEEEE
Confidence 123489999999999888777777764
No 189
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.87 E-value=4.8e-21 Score=176.17 Aligned_cols=195 Identities=19% Similarity=0.159 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHhc----C--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547 65 AVAEDAIVDSVRS----S--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA 135 (311)
Q Consensus 65 ~~~~~a~~~~~~~----~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~ 135 (311)
..+.++|.+.... + ....|+. .+..+|++.++++++ .+..++ ++|+++|+..++.+++++|
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~G- 101 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPD- 101 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTT-
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCC-
Confidence 3466777665321 1 1223444 367889999999883 344555 8899999999999999999
Q ss_pred CEEEecC-CCCcchHH----------HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC----CCCCCccC
Q 021547 136 ANILLPR-PGWPFYES----------FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN----PCNPCGNV 200 (311)
Q Consensus 136 d~Vl~~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~----p~nptG~~ 200 (311)
|+|+++. +.|..+.. .++..|++++.++++ .++.+|++.+++.++++++++++++ |+||||.+
T Consensus 102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~--~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v 179 (409)
T 3jzl_A 102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLL--ENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI 179 (409)
T ss_dssp CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCC--TTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCC--CCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc
Confidence 9999998 99998874 346778999988864 3567999999999999999999999 99999876
Q ss_pred CCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCcc
Q 021547 201 LTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVL 277 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~ 277 (311)
. ++++|+++|++ +|+++++|++|+.+.+...+ .. . +..++++|+||.++.+| .+.||++++.
T Consensus 180 ~---~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p-~~---~---g~Div~~S~sK~lgg~~~~~GG~v~~~~----- 244 (409)
T 3jzl_A 180 E---KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP-PE---V---GADIIAGSLIKNPGGGLAKTGGYIAGKE----- 244 (409)
T ss_dssp H---HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS-GG---G---TCSEEEEETTSGGGTTTCSSCEEEEECH-----
T ss_pred c---cHHHHHHHHHhhCCCCEEEEeCCcccccccCCc-cc---c---CCeEEEECccccCCccCCceEEEEEeCH-----
Confidence 4 59999999999 99999999999976543221 11 1 23499999999998777 4468888742
Q ss_pred chhhHHHHHhhh
Q 021547 278 QKSGIVGSIKAC 289 (311)
Q Consensus 278 ~~~~~~~~~~~~ 289 (311)
+++++++..
T Consensus 245 ---~li~~l~~~ 253 (409)
T 3jzl_A 245 ---ALVDLCGYR 253 (409)
T ss_dssp ---HHHHHHHHH
T ss_pred ---HHHHHHHHH
Confidence 477777764
No 190
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=7.4e-21 Score=176.82 Aligned_cols=186 Identities=13% Similarity=0.116 Sum_probs=141.6
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 163 (311)
...++|++++++++ .. +.+++ ++|++++..++.+++++| |+|+++.+.|.++... ++..|++++.++
T Consensus 115 ~~~~l~~~lA~l~g------~~-~~v~~-~sG~~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 185 (445)
T 1qgn_A 115 TTVVLEEKISALEG------AE-STLLM-ASGMCASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETILPKMGITATVID 185 (445)
T ss_dssp HHHHHHHHHHHHHT------CS-EEEEE-SCHHHHHHHHHHHHSCSS-CEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHhC------CC-cEEEe-CCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 45688999998883 22 34444 555699999999999999 9999999999987653 566899999887
Q ss_pred ccCCCCcccCHHHHHhhcCCCc-cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 164 LLPERGWEVDLEAVEALADENT-AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~-~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
.. |++.+++.+++++ +++++++|+||||.+.+ +++|.++|+++|+++|+|++|....+. .++ .
T Consensus 186 ~~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~- 249 (445)
T 1qgn_A 186 PA-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-A- 249 (445)
T ss_dssp SS-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-T-
T ss_pred CC-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c-
Confidence 52 8899999998888 99999999999999998 899999999999999999999864321 111 1
Q ss_pred CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547 243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 308 (311)
.+..++++|+||.++.+| .++||+++++ ++++++..... .....+++..+++.+.+
T Consensus 250 --~g~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l 307 (445)
T 1qgn_A 250 --LGADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGM 307 (445)
T ss_dssp --TTCSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred --cCCEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhH
Confidence 223489999999988776 5899998853 36676665533 33345666555544443
No 191
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.87 E-value=2.5e-20 Score=173.14 Aligned_cols=194 Identities=18% Similarity=0.161 Sum_probs=152.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
++++|+|+..+ ..+.+.+++.+.+... .|.+..+..++|++++++++. +++++++++++++
T Consensus 30 ~~~~i~~~~~~--------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g~--------~~~i~~~sGt~a~ 90 (437)
T 3bb8_A 30 GKSVVPPSGKV--------IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLGV--------PYVLTTTSGSSAN 90 (437)
T ss_dssp TTSCBCSCCCC--------CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHTC--------SEEEEESCHHHHH
T ss_pred CCccccCCCCC--------CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHCC--------CcEEEeCCHHHHH
Confidence 44567775433 2467888888887643 355566889999999999942 2678888889999
Q ss_pred HHHHHHH---------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC-C
Q 021547 124 EIILTVI---------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-P 193 (311)
Q Consensus 124 ~~~~~~l---------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p 193 (311)
.+++.++ +++| |+|+++.|+|..+...++..|.+++.+++.+ +++.+|++.+++.++++++++++++ +
T Consensus 91 ~~al~~l~~~~~~~~~~~~g-d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~ 168 (437)
T 3bb8_A 91 LLALTALTSPKLGVRALKPG-DEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAHTL 168 (437)
T ss_dssp HHHHHHTTCGGGGGGSCCTT-CEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEECGG
T ss_pred HHHHHHhhhcccccccCCCc-CEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeCCC
Confidence 9999998 7889 9999999999999999999999999998754 3578999999999988999999884 4
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+|| .+ +++|.++|+++|+++|+|++|+. ..+++. .+..+. .+++.||+|.++++|.+.|++++++
T Consensus 169 g~~----~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~----d~~~~s~~~~k~l~~g~gg~~~~~~ 234 (437)
T 3bb8_A 169 GNL----FD---LAEVRRVADKYNLWLIEDCCDALGSTYDGK---MAGTFG----DIGTVSFYPAKHITMGEGGAVFTQS 234 (437)
T ss_dssp GCC----CC---HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSTTSSSCCSSCEEEEESC
T ss_pred CCh----hc---HHHHHHHHHHcCCEEEEECccccCceECCe---eccccc----CEEEEECcCCcCCCCCCeEEEEeCC
Confidence 554 45 99999999999999999999984 333221 111111 1778899888889999999999854
No 192
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.87 E-value=3.3e-21 Score=177.94 Aligned_cols=195 Identities=17% Similarity=0.138 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547 65 AVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA 135 (311)
Q Consensus 65 ~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~ 135 (311)
+.++++|.+.... .....|+. .|..++++.++++++ .+..++ ++|+++|+..++.+++++|
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pG- 115 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPG- 115 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTT-
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCC-
Confidence 3566777654211 11123444 367889999999884 233455 7888999999999999999
Q ss_pred CEEEecC-CCCcchHH-----------HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeC----CCCCC
Q 021547 136 ANILLPR-PGWPFYES-----------FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIIN----PCNPC 197 (311)
Q Consensus 136 d~Vl~~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~npt 197 (311)
|+|+++. |.|..+.. .++..|++++.+++. .++.+|++.+++.++ +++++|++++ |+||+
T Consensus 116 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~npt 193 (427)
T 3i16_A 116 NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRA 193 (427)
T ss_dssp CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCC
T ss_pred CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCc
Confidence 9999999 99998763 346678999988864 345789999999988 7899999999 89999
Q ss_pred ccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCC
Q 021547 198 GNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPN 274 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~ 274 (311)
|.+ .++++|+++|++ +|+++++|++|+.+.+...+ .. . +..|+++|+||.++.+| .+.||++++.
T Consensus 194 g~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~~-~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~-- 261 (427)
T 3i16_A 194 LLI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---TD-V---GADLIAGSLIKNIGGGIAPTGGYLAGTK-- 261 (427)
T ss_dssp CCH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---GG-G---TCSEEEEETTSGGGTTTCCSCEEEEECH--
T ss_pred ccH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---cc-c---CCeEEEecCcccCCCCCCceEEEEEECH--
Confidence 866 569999999999 99999999999976543221 11 1 22499999999988777 6678988742
Q ss_pred CccchhhHHHHHhhh
Q 021547 275 GVLQKSGIVGSIKAC 289 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~ 289 (311)
+++++++..
T Consensus 262 ------~li~~l~~~ 270 (427)
T 3i16_A 262 ------DCIEKTSYR 270 (427)
T ss_dssp ------HHHHHHHHH
T ss_pred ------HHHHHHHHh
Confidence 478888764
No 193
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.87 E-value=4.6e-22 Score=180.06 Aligned_cols=223 Identities=10% Similarity=0.016 Sum_probs=153.5
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-C-EEE
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--------FNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-D-IYI 115 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~-v~~ 115 (311)
.++.++.|. .++++.+++++.+.+.... ..+|. .+..++++.+.+.+.+.+|. ..+ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 456666663 5788999999998874310 11121 23455677777777776664 332 5 577
Q ss_pred eCChHHHHHHHHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCc--ccCHHHHHhhcCCCccEEEEe
Q 021547 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGW--EVDLEAVEALADENTAAIVII 191 (311)
Q Consensus 116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~i~i~ 191 (311)
|+|+++++..++.+++++| |+|++..+.+... ...++..| +++.++...+.++ .+|.++++ +++++++++++
T Consensus 74 t~g~t~a~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~ 149 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEG-QTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLT 149 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEE
T ss_pred CCCchHHHHHHHHhcCCCC-CeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEe
Confidence 8999999999999999999 9999887665442 46677789 9999887532222 34655544 67789999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
+|+||||..++ ++++| +|+++|+|++|+... .+..+..+ .+++.|+||+|+++| +||++++
T Consensus 150 ~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~ 210 (362)
T 2c0r_A 150 SNETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVR 210 (362)
T ss_dssp SEETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEE
T ss_pred CCcCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEc
Confidence 99999999754 35555 799999999998643 12223222 288889999999888 9999986
Q ss_pred CCCCccchhhHHHHHhh-------------hhccccCCCchhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKA-------------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
.. +++.++. .....++++.++|+++.+.|+
T Consensus 211 ~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 253 (362)
T 2c0r_A 211 ED--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLK 253 (362)
T ss_dssp GG--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH
T ss_pred HH--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHH
Confidence 53 2222211 112235677788888877764
No 194
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=4.3e-21 Score=177.22 Aligned_cols=194 Identities=16% Similarity=0.156 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547 65 AVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA 135 (311)
Q Consensus 65 ~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~ 135 (311)
+.|.+++.+.... .....|+.. |..++++.++++++ .+..++ ++|+++|+.+++.+++++|
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pG- 116 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPN- 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTT-
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCC-
Confidence 4677777765321 112245443 67889999999883 344566 7888999999999999999
Q ss_pred CEEEecC-CCCcchH-----------HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeC----CCCCC
Q 021547 136 ANILLPR-PGWPFYE-----------SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIIN----PCNPC 197 (311)
Q Consensus 136 d~Vl~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~npt 197 (311)
|+|++++ |.|..+. ..++..|++++.++. +++.+|++.++++++ +++++|++++ |+|||
T Consensus 117 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~npt 193 (427)
T 3hvy_A 117 DTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKS 193 (427)
T ss_dssp CEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCC
T ss_pred CEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCcc
Confidence 9999998 9998876 334667999998876 456899999999998 8999999999 89999
Q ss_pred ccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCC
Q 021547 198 GNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPN 274 (311)
Q Consensus 198 G~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~ 274 (311)
|.+ .++++|+++|++ +|+++++|++|+.+.+...+ +. . +..|+++|+||.++.+| .+.||++++.
T Consensus 194 g~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~-~---gaDiv~~S~sK~lgg~g~~~GG~i~~~~-- 261 (427)
T 3hvy_A 194 LRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TD-V---GADIIAGSLIKNIGGGIATTGGYIAGKE-- 261 (427)
T ss_dssp CCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GG-G---TCSEEEEETTSGGGTTTCCSCEEEEECH--
T ss_pred ccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC---cc-c---CCeEEEECCcccccccccceEEEEEECH--
Confidence 765 569999999999 89999999999876543222 11 1 12399999999988766 4568887642
Q ss_pred CccchhhHHHHHhhh
Q 021547 275 GVLQKSGIVGSIKAC 289 (311)
Q Consensus 275 ~~~~~~~~~~~~~~~ 289 (311)
+++++++..
T Consensus 262 ------~li~~l~~~ 270 (427)
T 3hvy_A 262 ------EYVTQATFR 270 (427)
T ss_dssp ------HHHHHHHHH
T ss_pred ------HHHHHHHHH
Confidence 478887764
No 195
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.87 E-value=1.4e-21 Score=183.99 Aligned_cols=221 Identities=12% Similarity=0.008 Sum_probs=157.9
Q ss_pred hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHH
Q 021547 27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAEYL 100 (311)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l 100 (311)
.+..++....++ ..+.|+|..+. .++++.+++++.+.+.+....+ |....+..++++.+.+++
T Consensus 31 ~~~~~~~~~~~~-----~~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 99 (483)
T 1rv3_A 31 EVYDIIKKESNR-----QRVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA 99 (483)
T ss_dssp HHHHHHHHHHHH-----HHSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hhcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence 455555443222 24679997665 2468999999988876422112 333334578888888888
Q ss_pred hhcCCCCCCC--CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcC--cEEEEeeccCCC
Q 021547 101 NRDLPYKLSA--DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES--------FAKRNH--IEVRHFDLLPER 168 (311)
Q Consensus 101 ~~~~g~~~~~--~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~--------~~~~~g--~~~~~~~~~~~~ 168 (311)
.+.+|.+.+. .+|++++|+ +++.+++.+++++| |+|+++++.|.++.. .+...| .+.+.+++++ +
T Consensus 100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~ 176 (483)
T 1rv3_A 100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPH-GRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-D 176 (483)
T ss_dssp HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTT-CEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-T
T ss_pred HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCC-CEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-C
Confidence 8888765322 247888887 88888899999999 999999998876642 223344 3444444332 4
Q ss_pred CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCC
Q 021547 169 GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIV 246 (311)
Q Consensus 169 ~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~ 246 (311)
++.+|+++|++.++ .++++|++ +++|++ .+++ +++|.++|+++|++||+|++|. ++.+.+....++. .
T Consensus 177 ~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-----~ 246 (483)
T 1rv3_A 177 TGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-----H 246 (483)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-----T
T ss_pred CCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-----C
Confidence 57899999999987 78999988 888888 8888 9999999999999999999987 4444343333332 1
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
..|++.|+||++ .|+|.||+++++.
T Consensus 247 ~div~~s~~K~l--~GprgG~i~~~~~ 271 (483)
T 1rv3_A 247 CHVVTTTTHKTL--RGCRAGMIFYRRG 271 (483)
T ss_dssp CSEEEEESSGGG--CCCSCEEEEEECS
T ss_pred CcEEEecCcccC--CCCCceEEEEcch
Confidence 238899999985 6888999999764
No 196
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.86 E-value=1.1e-20 Score=173.60 Aligned_cols=188 Identities=16% Similarity=0.148 Sum_probs=142.9
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-----HHHcCcEEEEe
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-----AKRNHIEVRHF 162 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-----~~~~g~~~~~~ 162 (311)
...++++.+++++. .+++++++++++|+.+ +..++++| |+|+++.+.|.+.... ++..|.+++.+
T Consensus 68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 137 (400)
T 3nmy_A 68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAG-SHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV 137 (400)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTT-CEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCC-CEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence 45678888888773 3367777788999998 56678899 9999999999865554 34469999988
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~ 242 (311)
+.. |++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+. . ++. +
T Consensus 138 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~--~--~~~-~ 202 (400)
T 3nmy_A 138 DLT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ--R--PLS-L 202 (400)
T ss_dssp CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC--C--GGG-G
T ss_pred CCC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC--C--hhh-c
Confidence 753 889999999999999999999999999998 999999999999999999999853322 1 111 1
Q ss_pred CCCCCeEEEecCcccCCCCcceeeE-EEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGW-LATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 309 (311)
+..+++.|+||.++.+|.++|+ +++... ++++++++.... .+...+++.++++.+.++
T Consensus 203 ---g~div~~S~sK~l~g~g~~~gG~~vv~~~------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~ 262 (400)
T 3nmy_A 203 ---GADLVVHSATKYLNGHSDMVGGIAVVGDN------AELAEQMAFLQNSIGGVQGPFDSFLALRGLK 262 (400)
T ss_dssp ---TCSEEEEETTTTTTCSSSCCCEEEEECSC------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT
T ss_pred ---CCcEEEecCccccCCCCCcceeEEEEeCC------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh
Confidence 2349999999999999988877 443322 246777766533 445667777766655443
No 197
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.86 E-value=2.7e-21 Score=179.19 Aligned_cols=243 Identities=12% Similarity=0.064 Sum_probs=151.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA 122 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a 122 (311)
+++.++||..+..... .-..+|.+.+++.+++.......|+ .....++++.+++++ + ..+++++|+|++++
T Consensus 51 ~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea 121 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMI-LGHNHPAIRQAVIEAVERGLSFGAP-TEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESSGGGTTCT-TCBTCHHHHHHHHHHHTTCSCCSSC-CHHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccc-cCCCCHHHHHHHHHHHHhCcccCCC-CHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence 4788999987753211 1125899999999998754332342 223344444444444 3 46899999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCc------------ccCHHHHHhhcCC--Cc
Q 021547 123 VEIILTVITR--LGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGW------------EVDLEAVEALADE--NT 185 (311)
Q Consensus 123 ~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~--~~ 185 (311)
++.+++.... .+ +.|++..+.|.++...+. ..+.....+......+. ..|+++|++.+++ ..
T Consensus 122 ~~~al~~a~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 4e77_A 122 TMSAIRLARGYTGR-DKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE 200 (429)
T ss_dssp HHHHHHHHHHHHCC-CEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHhhCC-CEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence 9999886542 44 789999999987654211 11111100000000000 1178899988763 34
Q ss_pred cEEEEeCCCCCC-ccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547 186 AAIVIINPCNPC-GNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW 263 (311)
Q Consensus 186 ~~i~i~~p~npt-G~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 263 (311)
.++++++|+|++ |... +.+.+++|.++|++||+++|+||+|.++ ..|.. .....+....++ .|+||.++ +|+
T Consensus 201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~ 274 (429)
T 4e77_A 201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPDL---TCLGKIIG-GGM 274 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCSE---EEEEGGGG-TTS
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCCe---eeeccccc-CCC
Confidence 456667776554 4433 4556999999999999999999999987 44432 222223222233 48999987 799
Q ss_pred eeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547 264 RFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 264 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~ 309 (311)
|+||++++. ++++.+... ...+++.++++++++.+.|+
T Consensus 275 ~~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 316 (429)
T 4e77_A 275 PVGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLT 316 (429)
T ss_dssp CCEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHH
T ss_pred CeEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHH
Confidence 999998743 466666542 33456789999998888775
No 198
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.86 E-value=1.1e-20 Score=175.02 Aligned_cols=178 Identities=19% Similarity=0.158 Sum_probs=136.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcchHHHH----------HHcCcEEEE
Q 021547 93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPFYESFA----------KRNHIEVRH 161 (311)
Q Consensus 93 r~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~~~~~~----------~~~g~~~~~ 161 (311)
++.+.+++.+.+|......+++++ ||++|+..++.+++++| |+|+++. |.|..+...+ +..|.+++.
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~G-d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPG-DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTT-CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCC-CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 555555555544533322233355 66899999999999999 9999998 9999887554 457899999
Q ss_pred eeccCCCCcccCHHHHHhhcCCCccEEEEe-CCCCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCc
Q 021547 162 FDLLPERGWEVDLEAVEALADENTAAIVII-NPCNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~ 238 (311)
++... ++.+|++.|++.+++++++|+++ +|+||+|...+.+++++|+++|++ +|+++|+|++|+.+.++..+ ..
T Consensus 145 v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~-~~ 221 (431)
T 3ht4_A 145 VPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP-CH 221 (431)
T ss_dssp CCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG-GG
T ss_pred eCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc-cc
Confidence 88753 46799999999999999999999 589999999999999999999999 99999999999987754322 11
Q ss_pred ccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 239 MGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 239 ~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
+ +..++++|+||.++. .+...||++++. ++++.++..
T Consensus 222 ---~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~ 259 (431)
T 3ht4_A 222 ---V---GADLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYR 259 (431)
T ss_dssp ---T---TCSEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHH
T ss_pred ---c---CCeEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHH
Confidence 1 123999999998554 223339998753 477777664
No 199
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.8e-20 Score=173.36 Aligned_cols=158 Identities=22% Similarity=0.180 Sum_probs=130.6
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe-
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF- 162 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~- 162 (311)
...+++++++++++. +..++++++++|+..++.+++++| |+|+++.+.|.++...+ +..|++++.+
T Consensus 59 ~~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 129 (421)
T 2ctz_A 59 TVDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAG-DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTS 129 (421)
T ss_dssp HHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHTHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 457899999999842 234555556999999999999999 99999999999876654 7889999888
Q ss_pred eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCccCCCCCCcccc
Q 021547 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY-GHLAFGSTPYIPMGV 241 (311)
Q Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay-~~~~~~~~~~~~~~~ 241 (311)
+.. |++++++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++| +. .+.+. ++.
T Consensus 130 ~~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~-g~~~~---~~~- 194 (421)
T 2ctz_A 130 REE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG-GYLLR---PLA- 194 (421)
T ss_dssp TTC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG-GTSCC---GGG-
T ss_pred CCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc-cccCC---ccc-
Confidence 642 889999999999999999999999999999 999999999999999999999 53 23222 121
Q ss_pred cCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 242 FGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
. +..+++.|+||.++.+|.|+|++++.+
T Consensus 195 ~---~~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 195 W---GAALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred c---CCeEEEECCcccccCCCCcEEEEEEec
Confidence 1 234899999999999999999999863
No 200
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.85 E-value=8e-20 Score=172.73 Aligned_cols=204 Identities=14% Similarity=0.082 Sum_probs=161.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE---EeCChHHHHHHHHHHHhcC----
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY---ITLGCMEAVEIILTVITRL---- 133 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~---~t~g~~~a~~~~~~~l~~~---- 133 (311)
.++++.+.+++.+.+..+.. +|...++..++++.+.+++.+.+|.+..+++++ +|+|+++++..++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~-~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~ 144 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYV-DMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCC-ChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence 45678899998887764332 454455678899999999999888765455554 4899999999988888655
Q ss_pred ----CCC-----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547 134 ----GAA-----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204 (311)
Q Consensus 134 ----g~d-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 204 (311)
| + .|+++.++|..+...++..|++++.+++.. +++.+|++.|++++++++++|++++|+||||.+.+
T Consensus 145 ~~~~G-~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~-- 220 (502)
T 3hbx_A 145 RKAEG-KPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED-- 220 (502)
T ss_dssp HHHTT-CCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC--
T ss_pred HHhcC-CCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC--
Confidence 7 6 999999999999999999999999998743 44789999999999999999999999999999988
Q ss_pred HHHHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 205 HLQKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 205 ~l~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
+++|.++|+++ |+++++|++|+.+.. .+.....+. ...-.++..|.+|. +..+.++||+++.++.
T Consensus 221 -l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~ 294 (502)
T 3hbx_A 221 -VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-GLVYAGIGWVIWRNKE 294 (502)
T ss_dssp -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-TCCCSSCEEEEESSGG
T ss_pred -HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-cCCCCCeEEEEEeCHH
Confidence 88999999999 999999999986541 221111111 12234777899997 5667889999887643
No 201
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.85 E-value=8.1e-20 Score=173.03 Aligned_cols=199 Identities=10% Similarity=-0.018 Sum_probs=157.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------------
Q 021547 66 VAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR------------- 132 (311)
Q Consensus 66 ~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~------------- 132 (311)
.+.+.+...+..+. ..|...++..++++.+++|+.+.+|++...+.+++|+|+++++..++.++..
T Consensus 111 ~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~ 189 (511)
T 3vp6_A 111 LAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAA 189 (511)
T ss_dssp HHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGG
T ss_pred HHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCccc
Confidence 34455555554433 4788888899999999999999999876677899999999999988887754
Q ss_pred -CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEEeCCCCCCccCCC
Q 021547 133 -LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN------TAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 133 -~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~ 202 (311)
++ +.|+++.+.|..+...++..|+ +++.++.+ .++.+|+++|++.++++ ++++++++++||+|.+.+
T Consensus 190 ~~~-~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 190 VPK-LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp SCC-EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred CCC-eEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 46 7999999999999999999998 88888764 45789999999988754 788999999999999977
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
+++|+++|++||+|+++|++|+........+. .+... ..-.+++.+++|+++.| ..+|++++.++.
T Consensus 267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~--~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~ 333 (511)
T 3vp6_A 267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEKG 333 (511)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESSTT
T ss_pred ---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCC--ccCCEEEECcccccCCC-cCeEEEEEeCHH
Confidence 99999999999999999999997543221111 11111 11236778999998776 778999987754
No 202
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.85 E-value=1.8e-20 Score=172.78 Aligned_cols=214 Identities=15% Similarity=0.096 Sum_probs=133.4
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhcCCCCCCCCCE-EEeCC
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY------APMFGLPLARRAVAEYLNRDLPYKLSADDI-YITLG 118 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v-~~t~g 118 (311)
+.++|..+.. +.+|.+.+++.+.+.......| ........+++...+++.+.+| .+.+ ++++|
T Consensus 33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~v~~~~ 102 (425)
T 3ecd_A 33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN----AGHANVQPHS 102 (425)
T ss_dssp HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC----CCCceeecCc
Confidence 5678866641 2389999999988743211112 1111111222222233333333 2234 45888
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcc---hHHHHHHcCc--EEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeC
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPF---YESFAKRNHI--EVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIIN 192 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~ 192 (311)
+++++..++.+++++| |+|+++.|+|.. +.......|. +.+.++.. .+++.+|++.|++.++ ++++++++++
T Consensus 103 Gs~a~~~al~~~~~~g-d~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~v~~~~ 180 (425)
T 3ecd_A 103 GAQANGAVMLALAKPG-DTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS-RDTMLIDYDQVEALAQQHKPSLIIAGF 180 (425)
T ss_dssp HHHHHHHHHHHHCCTT-CEEEEECC------------------CEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred hHHHHHHHHHHccCCC-CEEEEcccccccceecchhhhhcccceeeeecCCC-cccCccCHHHHHHHHhhcCCcEEEEcc
Confidence 8999999999999999 999999999987 3333234455 44455443 2457899999999886 5899999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|+||+ ..+ +++|.++|++||++||+|++|. ++.+.+..+..+... .|++.|+||.+ +|.|+||++++
T Consensus 181 ~~~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~-----di~~~s~sK~l--~g~~~g~~~~~ 248 (425)
T 3ecd_A 181 SAYPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-----HVVTSTTHKTL--RGPRGGFVLTN 248 (425)
T ss_dssp SCCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSGGG--CCCSCEEEEES
T ss_pred ccCCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcC-----cEEEecCCccc--CCCCcEEEEeC
Confidence 99864 344 8999999999999999999964 344444333333221 28899999986 67899999986
Q ss_pred CCCCccchhhHHHHHhhhh
Q 021547 272 DPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~ 290 (311)
++ .+.+.+....
T Consensus 249 ~~-------~~~~~~~~~~ 260 (425)
T 3ecd_A 249 DE-------EIAKKINSAV 260 (425)
T ss_dssp CH-------HHHHHHHHHH
T ss_pred CH-------HHHHHHHhhh
Confidence 43 3666666553
No 203
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.85 E-value=5.2e-21 Score=178.50 Aligned_cols=241 Identities=12% Similarity=0.029 Sum_probs=154.8
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHH-H-HHHH---HHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAE-D-AIVD---SVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIY 114 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~-~-a~~~---~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~ 114 (311)
+++.++||..|.+....+. .+|.+. + ++.+ .+.... .|.. .....++++.+++++ + ....++|+
T Consensus 52 ~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~ 123 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLF 123 (449)
T ss_dssp TCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred CCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEE
Confidence 4566888876643211122 478999 8 9998 766432 2321 112344555555555 3 23568999
Q ss_pred EeCChHHHHHHHHHHHh---c-C----------CCCEEEecCCCCcchHHHHHH---------cCc-----EEEEeeccC
Q 021547 115 ITLGCMEAVEIILTVIT---R-L----------GAANILLPRPGWPFYESFAKR---------NHI-----EVRHFDLLP 166 (311)
Q Consensus 115 ~t~g~~~a~~~~~~~l~---~-~----------g~d~Vl~~~p~~~~~~~~~~~---------~g~-----~~~~~~~~~ 166 (311)
+|+|+++|++.++..+. . + | |+|++..|.|+++...+.. .+. ++..++...
T Consensus 124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~-~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 202 (449)
T 2cjg_A 124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALG-TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMR 202 (449)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCC-CEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred EeCchHHHHHHHHHHHHHHhcccccccccccCCC-CEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCC
Confidence 99999999999987653 2 2 7 9999999999875432211 122 344444321
Q ss_pred CCCc--------ccCHHHHHhhcC---CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC
Q 021547 167 ERGW--------EVDLEAVEALAD---ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST 234 (311)
Q Consensus 167 ~~~~--------~~d~~~l~~~l~---~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~ 234 (311)
.... ..+++.|++.++ ++++++++..++||+| ..++++++++|.++|++||+++|+||+|.++.+.|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 282 (449)
T 2cjg_A 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT 282 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred chhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence 0011 245566888774 4566655544478999 599999999999999999999999999998766654
Q ss_pred CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH-----Hh-hhhccccCCCchhHHHHHhhh
Q 021547 235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS-----IK-ACLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~q~~~~~~l 308 (311)
...+..++...+++ ++||.+ |+||++++. ++++. +. .....+++.++++|+++.+.|
T Consensus 283 -~~~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal 345 (449)
T 2cjg_A 283 -AWAYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL 345 (449)
T ss_dssp -SSTHHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred -ceeecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence 22222222222333 789986 799999854 23443 11 123345778999999888777
Q ss_pred h
Q 021547 309 V 309 (311)
Q Consensus 309 ~ 309 (311)
+
T Consensus 346 ~ 346 (449)
T 2cjg_A 346 E 346 (449)
T ss_dssp H
T ss_pred H
Confidence 5
No 204
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.84 E-value=2.1e-20 Score=174.87 Aligned_cols=194 Identities=17% Similarity=0.165 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-----C--C-C
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-----G--A-A 136 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-----g--~-d 136 (311)
+.+.+++.+.+..+. ..|.+..+..++|+++++++. .+++++|+|+++|+.+++.++.++ | . |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 677788888775443 368877788999999999993 368999999999999999999876 6 2 6
Q ss_pred EEEecCCCCcchHHHHHHcCcEEEEeecc----CC----CCcccCHHHHHhhcC----CCccEEEEeCCCCCC-ccCCCH
Q 021547 137 NILLPRPGWPFYESFAKRNHIEVRHFDLL----PE----RGWEVDLEAVEALAD----ENTAAIVIINPCNPC-GNVLTY 203 (311)
Q Consensus 137 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~----~~----~~~~~d~~~l~~~l~----~~~~~i~i~~p~npt-G~~~~~ 203 (311)
+|++..+.|..+.......+......... .. .++.+|++.|++.++ ++++++++++|+||+ |.+++.
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~ 203 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence 68877554455556666677766543211 11 245689999999887 378999999999998 999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccC----------CccCCCCCCcccc--cCCCCCeEEEecCcccCCCC-cceeeEEEe
Q 021547 204 QHLQKIAETARKLGILVIADEVYGH----------LAFGSTPYIPMGV--FGSIVPVITLGSISKRWIVP-GWRFGWLAT 270 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~----------~~~~~~~~~~~~~--~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~ 270 (311)
+++++|.++|++||++||+|+++.. ..+.+.....+.. +. ... +++.|+||.++++ | ||+++
T Consensus 204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d-~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYK-YAD-MLAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGG-GCS-EEEEESSSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhc-cCC-eEEEecccccCCCCc---eEEEe
Confidence 9999999999999999999966543 1333332222110 01 112 4578999998877 5 77776
Q ss_pred eC
Q 021547 271 ND 272 (311)
Q Consensus 271 ~~ 272 (311)
++
T Consensus 279 ~~ 280 (467)
T 2oqx_A 279 KD 280 (467)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 205
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.84 E-value=3.4e-20 Score=173.61 Aligned_cols=207 Identities=10% Similarity=0.033 Sum_probs=145.3
Q ss_pred CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh----cCC---CCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547 45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSM---FNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYIT 116 (311)
Q Consensus 45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~----~~~---~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t 116 (311)
++++.|+.+..+ +.++.+.+++.+.+. .+. ...|.+ ..-..++++.++++++ ..+++|++|
T Consensus 66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t 134 (465)
T 3e9k_A 66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVG------ANEKEIALM 134 (465)
T ss_dssp CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHT------CCGGGEEEC
T ss_pred CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcC------CCcCCEEEE
Confidence 467888887643 334445454444432 111 111211 1233567888888773 467899999
Q ss_pred CChHHHHHHHHHHHhcCC--CCEEEecCCCCcchH----HHHHHcCcEEEE--eecc-CCCCcccCHHHHHhhcC---CC
Q 021547 117 LGCMEAVEIILTVITRLG--AANILLPRPGWPFYE----SFAKRNHIEVRH--FDLL-PERGWEVDLEAVEALAD---EN 184 (311)
Q Consensus 117 ~g~~~a~~~~~~~l~~~g--~d~Vl~~~p~~~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~~~l~~~l~---~~ 184 (311)
+|+++++.+++.++.++| +++|+++.|+|++.. ..++..|+++.. +.+. ..+++.+|++++++.++ ++
T Consensus 135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~ 214 (465)
T 3e9k_A 135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS 214 (465)
T ss_dssp SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence 999999999999998765 145999999998743 367778887521 1111 23457789999999886 67
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 264 (311)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ..+..+.... ..+++.|++|.++....+
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g----~~~~~~~~~~---~D~~~~s~~K~l~~gp~~ 284 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVG----NVELYLHDWG---VDFACWCSYKYLNAGAGG 284 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT----TSCCCHHHHT---CCEEEECSSSTTCCCTTC
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcC----CcCCchhhcC---CCEEEECcccccccCCCc
Confidence 899999999999999999 899999999999999999999852 2222222222 348899999998433337
Q ss_pred eeEEEeeC
Q 021547 265 FGWLATND 272 (311)
Q Consensus 265 ~G~i~~~~ 272 (311)
+|+++++.
T Consensus 285 ~g~l~~~~ 292 (465)
T 3e9k_A 285 IAGAFIHE 292 (465)
T ss_dssp CCEEEECG
T ss_pred eEEEEEcH
Confidence 89988754
No 206
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.83 E-value=3.8e-19 Score=168.25 Aligned_cols=185 Identities=10% Similarity=-0.027 Sum_probs=146.2
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc--------CC----CC-EEEecCCCCcch
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR--------LG----AA-NILLPRPGWPFY 148 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--------~g----~d-~Vl~~~p~~~~~ 148 (311)
.|....+..++++.+.+++.+.+|.+.+.+++++|+|+++++..++.++.. +| .+ .|+++.+.|..+
T Consensus 123 ~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~ 202 (504)
T 2okj_A 123 TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 202 (504)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence 576666677888899888888777654467899999999999999888753 34 14 799999999999
Q ss_pred HHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 021547 149 ESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219 (311)
Q Consensus 149 ~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~ 219 (311)
...++..|. +++.++.+ .++.+|++.|++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+|
T Consensus 203 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~~ 277 (504)
T 2okj_A 203 KKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNLW 277 (504)
T ss_dssp HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTCE
T ss_pred HHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCE
Confidence 999998887 78888764 4678999999998865 5788999999999999988 99999999999999
Q ss_pred EEEeccccCCccCCCCC-CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547 220 VIADEVYGHLAFGSTPY-IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274 (311)
Q Consensus 220 li~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~ 274 (311)
+++|++|+...+....+ ..+..+ ....+++.|++|.++.| .++|++++.+++
T Consensus 278 lhvD~a~~~~~~~~~~~~~~~~g~--~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~ 330 (504)
T 2okj_A 278 LHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEKG 330 (504)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESSTT
T ss_pred EEEehhhhhHHHhCHhhHhhcCCc--ccCCEEEECchhhcCCC-cceEEEEEECHH
Confidence 99999999865432221 112111 11237778999998766 689999997653
No 207
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.83 E-value=7.6e-20 Score=172.21 Aligned_cols=200 Identities=11% Similarity=0.060 Sum_probs=152.7
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEeCChHHHHHHHHHHHhcC---
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-------ADDIYITLGCMEAVEIILTVITRL--- 133 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~~~--- 133 (311)
+..+.+++...+..+ ...|....+..++++.+++++.+.+|.+.. ..++++|+|+|+|+..++.++..+
T Consensus 87 ~~~~~~~~~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGCI-GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCCC-CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcC-ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 445666766666433 336766667889999999999998887642 346899999999998888776421
Q ss_pred ------CCC----------EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc------EEEEe
Q 021547 134 ------GAA----------NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA------AIVII 191 (311)
Q Consensus 134 ------g~d----------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~------~i~i~ 191 (311)
| | .|+++.+.|..+...++..|++++.++++ .++.+|+++|++.++++++ +++++
T Consensus 166 ~~~~~~g-d~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~ 242 (486)
T 1js3_A 166 RLQAASP-GLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT 242 (486)
T ss_dssp HHHHHST-TCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhhccCc-cchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 3 3 38889999999999999999999999874 5778999999999876553 78889
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+|+||||.+-+ +++|+++|++||+|+++|++|+...+....... +..+. ..+ .++.++||.++.| +++|++++
T Consensus 243 ~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~-~ad-si~~~~hK~~~~p-~~~G~l~~ 316 (486)
T 1js3_A 243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE-FAD-SFNFNPHKWLLVN-FDCSAMWV 316 (486)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG-GCS-EEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc-ccC-eeEEchhhhcCCC-cceEEEEE
Confidence 99999999877 999999999999999999999975432211111 11111 112 5567899997776 89999999
Q ss_pred eCC
Q 021547 271 NDP 273 (311)
Q Consensus 271 ~~~ 273 (311)
.++
T Consensus 317 ~~~ 319 (486)
T 1js3_A 317 KRR 319 (486)
T ss_dssp SCH
T ss_pred eCH
Confidence 764
No 208
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.83 E-value=7.7e-19 Score=166.56 Aligned_cols=181 Identities=13% Similarity=0.020 Sum_probs=143.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-------c-CCCC------EEEecCCCCcc
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-------R-LGAA------NILLPRPGWPF 147 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-------~-~g~d------~Vl~~~p~~~~ 147 (311)
.|...++..++++.+.+++.+.+|.+ .+++++|+|+|+++..++.++. + +| + .|+++.+.|..
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G-~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG-LRTLPPLALFTSKECHYS 215 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC-GGGSCCEEEEEETTSCTH
T ss_pred chhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC-ccccCCeEEEECCCccHH
Confidence 56666677777777777777766654 6789999999999988888773 2 57 6 89999999999
Q ss_pred hHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 148 YESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 148 ~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
+...++..|. +++.++.+ .++.+|++.|++.+++ ++++|++++|+|+||.+.+ +++|.++|+++|+
T Consensus 216 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~ 290 (515)
T 2jis_A 216 IQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGL 290 (515)
T ss_dssp HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCC
Confidence 9999999988 88888764 4678999999998865 4888999999999999988 9999999999999
Q ss_pred EEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 219 LVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 219 ~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
|+|+|++|+...+....+. .+..+ ....+++.|++|+++.| .++|++++.++
T Consensus 291 ~l~vD~a~~~~~~~~~~~~~~~~g~--~~aD~v~~s~hK~l~~p-~g~G~l~~~~~ 343 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHRHLLDGI--QRADSVAWNPHKLLAAG-LQCSALLLQDT 343 (515)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESCC
T ss_pred eEEEehhhhhHHHhChhhHhhcCCC--ccCCEEEECcccccCCC-CCeeEEEEeCh
Confidence 9999999998665322211 12211 12338888999997755 57999999765
No 209
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=4.2e-19 Score=167.65 Aligned_cols=203 Identities=15% Similarity=0.101 Sum_probs=153.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH----h-----
Q 021547 61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI----T----- 131 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l----~----- 131 (311)
.+.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++ +
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence 35677777777655443333356555567888999888888888764 2378999999999999888873 2
Q ss_pred ----cC------CCC-EEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC----cc--EEEEe
Q 021547 132 ----RL------GAA-NILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN----TA--AIVII 191 (311)
Q Consensus 132 ----~~------g~d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~--~i~i~ 191 (311)
.+ | + .|+++.+.|..+...++..|. +++.++.+ .++.+|+++|++.++++ ++ +++++
T Consensus 189 ~~~~~~G~~~~~g-~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~ 265 (497)
T 2qma_A 189 HSIQKLGLPDYAD-KLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGT 265 (497)
T ss_dssp CCHHHHCSCGGGG-GEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred cchhhcccccccC-CeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEc
Confidence 12 4 6 899999999999999998877 78888764 46789999999988653 33 77888
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
+++||||...+ +++|.++|++||+|+++|++|+.+.+... ... +..+ ....+++.|+||+++.| .++|++++
T Consensus 266 ~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi--~~~D~i~~s~hK~l~~p-~~~G~l~~ 338 (497)
T 2qma_A 266 AGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGV--ERAHSISVDFHKLFYQT-ISCGALLV 338 (497)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTG--GGCSEEEEETTTTTCCC-SSCEEEEE
T ss_pred CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCc--ccCCEEEEcchhccCCC-cceEEEEE
Confidence 89999999888 99999999999999999999998654322 111 1111 12237778999997776 69999998
Q ss_pred eCCC
Q 021547 271 NDPN 274 (311)
Q Consensus 271 ~~~~ 274 (311)
.++.
T Consensus 339 ~~~~ 342 (497)
T 2qma_A 339 NDKS 342 (497)
T ss_dssp SCGG
T ss_pred eCHH
Confidence 7653
No 210
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.82 E-value=8.2e-20 Score=170.24 Aligned_cols=212 Identities=12% Similarity=0.024 Sum_probs=143.7
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCcHHHH--HHHH-HHHhhcCCCCCCCCCEEE-eCC
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM---FGLPLAR--RAVA-EYLNRDLPYKLSADDIYI-TLG 118 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~l~~~~g~~~~~~~v~~-t~g 118 (311)
+.|++..+. .+.+|.+.+++.+.+.......|+.. .|....+ +.++ +++.+.+|.+ .+.+ ++|
T Consensus 46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~----~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHS 115 (447)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS----EEECCCSS
T ss_pred CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC----ceEEEeCC
Confidence 668885543 23489999999887753222223221 2434333 4444 5555544432 2444 788
Q ss_pred hHHHHHHHHHHHhcCCCCEEEecCCCCcchH-H--H--HHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeC
Q 021547 119 CMEAVEIILTVITRLGAANILLPRPGWPFYE-S--F--AKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIIN 192 (311)
Q Consensus 119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-~--~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~ 192 (311)
+++++..++.+++++| |+|+++.|+|..+. . . ....+...+.+++.+ +++.+|++++++.++ .+++++++++
T Consensus 116 Gs~a~~~a~~~~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~ 193 (447)
T 3h7f_A 116 GAQANAAVLHALMSPG-ERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGW 193 (447)
T ss_dssp HHHHHHHHHHHHCCTT-CEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHhcCCC-CEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcC
Confidence 8999999999999999 99999999987621 1 1 112344566665533 456799999999885 4788888889
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
|+||++. ++++|.++|+++|+++|+|++|. ++.+.+..+.++.. ..|++.|+||++ +|+|.||++++
T Consensus 194 ~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~-----~di~~~s~sK~l--~G~~gG~i~~~ 261 (447)
T 3h7f_A 194 SAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPH-----ADVVSTTVHKTL--GGGRSGLIVGK 261 (447)
T ss_dssp SSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT-----CSEEEEESSGGG--CCCSCEEEEEC
T ss_pred CCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCC-----CcEEEecCCcCC--CCCCeEEEEEC
Confidence 9999876 39999999999999999999974 44444432222211 127899999986 47899999875
Q ss_pred CCCCccchhhHHHHHhhh
Q 021547 272 DPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~ 289 (311)
. ++++.+...
T Consensus 262 ~--------~~~~~l~~~ 271 (447)
T 3h7f_A 262 Q--------QYAKAINSA 271 (447)
T ss_dssp G--------GGHHHHHHH
T ss_pred H--------HHHHHHhhh
Confidence 3 256666554
No 211
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.81 E-value=9.7e-20 Score=167.61 Aligned_cols=204 Identities=13% Similarity=0.071 Sum_probs=129.8
Q ss_pred CcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC
Q 021547 63 TAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA 136 (311)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d 136 (311)
.+|.+.+++.+.+...... .|........+++...+++.+.+| .++++|++++| ++++..++.+++++| |
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~g-d 117 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPG-D 117 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTT-C
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCC-C
Confidence 5899999998887432211 122222334444433344444334 34555656665 789999999999999 9
Q ss_pred EEEecCCCCcchH---HHHHHcCc--EEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547 137 NILLPRPGWPFYE---SFAKRNHI--EVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIA 210 (311)
Q Consensus 137 ~Vl~~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~ 210 (311)
+|+++.|+|..+. ......|. ..+.++.+ .++.+|++.|++.+++ +++++++++|+||+ ..+ +++|.
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~ 190 (420)
T 3gbx_A 118 TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMR 190 (420)
T ss_dssp EEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHH
T ss_pred EEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHH
Confidence 9999999997733 22222333 44444443 5667999999998876 58999998999874 555 89999
Q ss_pred HHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547 211 ETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289 (311)
Q Consensus 211 ~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 289 (311)
++|++||+++|+||+|.. +.+.+..+..+. ...|++.|+||.++ |.+.||+++++.. ..+.+.+...
T Consensus 191 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~ 258 (420)
T 3gbx_A 191 EIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSA 258 (420)
T ss_dssp HHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhh
Confidence 999999999999999864 333332222222 13489999999975 5556999886421 1356666554
No 212
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.81 E-value=1.6e-19 Score=168.18 Aligned_cols=170 Identities=13% Similarity=0.097 Sum_probs=127.4
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEe
Q 021547 83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162 (311)
Q Consensus 83 Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~ 162 (311)
|.+.....++++.+++ ++ .. +++++|+|+++++.+++.+++++| |+|+++.|+|.++...+...|++++.+
T Consensus 53 ~~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~g-d~Vlv~~~~h~s~~~~~~~~G~~~~~v 123 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKK-GDILMARNVHKSVLHALDISQQEGHFI 123 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSS-SCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred cCcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCC-CEEEEecCccHHHHHHHHHcCCeEEEE
Confidence 3344455677777776 53 22 679999999999999999999999 999999999999999999999999998
Q ss_pred eccCCCC----cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCC
Q 021547 163 DLLPERG----WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYI 237 (311)
Q Consensus 163 ~~~~~~~----~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~ 237 (311)
+....++ +.+|++.+ +.++++++++++ .|++|.+++ +++|.++|+++|+++|+|++|+. +.|.+. +.
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~ 195 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PD 195 (446)
T ss_dssp EEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CC
T ss_pred eCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CC
Confidence 8733333 56788877 456789999999 556999999 89999999999999999999996 445543 22
Q ss_pred cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
....+.. .+++.|+||.++ ++.++||+++++.
T Consensus 196 ~~~~~g~---Di~~~S~~K~l~-~~~g~g~l~~~~~ 227 (446)
T 2x3l_A 196 STLNYQA---DYVVQSFHKTLP-ALTMGSVLYIHKN 227 (446)
T ss_dssp CGGGGTC---SEEEECHHHHSS-SCTTCEEEEEETT
T ss_pred ChHHcCC---CEEEECCccccc-cccccEEEEEcCC
Confidence 3222222 389999999633 3345899998764
No 213
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=3.6e-18 Score=156.08 Aligned_cols=148 Identities=15% Similarity=0.197 Sum_probs=125.6
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-------hcCC
Q 021547 62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-------TRLG 134 (311)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-------~~~g 134 (311)
..++.+.+++.+.+... .|.+..+..++|++++++++. +++++++++++++..++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFGS--------KYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHCC--------CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 35788889999888653 455667889999999999942 25777888889999999998 7789
Q ss_pred CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547 135 AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214 (311)
Q Consensus 135 ~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~ 214 (311)
|+|+++.++|..+...++..|.+++.+++++. ++.+|+++|++.++++++++++++ ++|...+ +++|.++|+
T Consensus 81 -~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~ 152 (390)
T 3b8x_A 81 -DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKIIG 152 (390)
T ss_dssp -CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHT
T ss_pred -CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHHH
Confidence 99999999999999999999999999987543 478999999999988899998875 4555555 999999999
Q ss_pred HhCCEEEEeccccC
Q 021547 215 KLGILVIADEVYGH 228 (311)
Q Consensus 215 ~~~~~li~D~ay~~ 228 (311)
++|+++|+|++|+.
T Consensus 153 ~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 153 GRDIILLEDNCESM 166 (390)
T ss_dssp TSCCEEEEECTTCT
T ss_pred HcCCEEEEECcCcc
Confidence 99999999999994
No 214
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.80 E-value=3e-19 Score=163.65 Aligned_cols=210 Identities=10% Similarity=0.067 Sum_probs=139.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHH----HHHHHHHhhcCCCCCCCCCE
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY------APMFGLPLAR----RAVAEYLNRDLPYKLSADDI 113 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr----~~ia~~l~~~~g~~~~~~~v 113 (311)
.+.+++|+.++| + ++.+.+++.+.+.......| .......+++ +++++++ |. ..+.+
T Consensus 23 ~~~~~~~~~~~~-----~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g~--~~~~i 89 (405)
T 2vi8_A 23 HAKIELIASENF-----V--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----GA--EHANV 89 (405)
T ss_dssp HHSEECCTTCCC-----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----TC--SEEEC
T ss_pred hcceeeccCccc-----C--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----CC--CceEE
Confidence 356778866653 2 88999999888752211112 1112234555 4566655 32 33334
Q ss_pred EEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH-H--HHHcCc--EEEEeeccCCCCcccCHHHHHhhcCC-CccE
Q 021547 114 YITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES-F--AKRNHI--EVRHFDLLPERGWEVDLEAVEALADE-NTAA 187 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 187 (311)
++++| ++++..++.+++++| |+|+++.|+|..+.. . +...|. +++.+++.+ .++.+|++.+++.+++ ++++
T Consensus 90 ~~~sG-t~a~~~a~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~ 166 (405)
T 2vi8_A 90 QPHSG-AQANMAVYFTVLEHG-DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKL 166 (405)
T ss_dssp CCSSH-HHHHHHHHHHHCCTT-CEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSE
T ss_pred EecCc-HHHHHHHHHHhcCCC-CEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeE
Confidence 44555 999999999999999 999999999987643 1 123333 677766532 4577999999998875 7888
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCCCCeEEEecCcccCC-CCccee
Q 021547 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRF 265 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~ 265 (311)
+++ +|+|. |...+ +++|.++|++||+++|+|++|..... .+..... +.. ..+++.|+||.|+ .+|
T Consensus 167 v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~~--~di~~~s~sK~~~g~~g--- 233 (405)
T 2vi8_A 167 IVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VPY--AHFVTTTTHKTLRGPRG--- 233 (405)
T ss_dssp EEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TTT--CSEEEEESSSTTCCCSC---
T ss_pred EEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCc---ccc--CCEEEEeccccCCCCCC---
Confidence 776 44443 45445 89999999999999999999994322 2221111 111 2288999999987 556
Q ss_pred eEEEeeCCCCccchhhHHHHHhhhh
Q 021547 266 GWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 266 G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
||++++. ++++.++...
T Consensus 234 G~~~~~~--------~~~~~l~~~~ 250 (405)
T 2vi8_A 234 GMILCQE--------QFAKQIDKAI 250 (405)
T ss_dssp EEEEECH--------HHHHHHHHHH
T ss_pred eEEEEcH--------HHHHHHHhhh
Confidence 9999852 3667766553
No 215
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.67 E-value=5e-21 Score=178.54 Aligned_cols=237 Identities=19% Similarity=0.103 Sum_probs=161.6
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
.+++.+|||..|......+ ..+|.+.+++.+++.......|. .....+|.+.+++++ + ..+.+++++|+++
T Consensus 97 ~dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~~-~~~~~~Lae~L~~~~----p---~~~~v~~~nSGse 167 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLSTQ-TENEALFAEAVCDRF----P---SIDLVRFTNSGTE 167 (465)
Confidence 3588999998885321111 25789999999988754333343 234556666666665 2 3478999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH----HcCc--EEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEe
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK----RNHI--EVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVII 191 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~ 191 (311)
|+..+++.... .|+++|++..++|.++...+. ..|. .+..++. -|++.|++.++ ++++++++.
T Consensus 168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e 240 (465)
T 2yky_A 168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE 240 (465)
Confidence 99999987642 333899999999987654333 1222 2222221 27888888887 567777766
Q ss_pred CCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
..++++|... +++.+++|.++|++||+++|+||+|. +.. +. ...+..+. ....+.+|||.++. |+|+||+++
T Consensus 241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~g---v~pDi~t~sK~lg~-G~piG~v~~ 313 (465)
T 2yky_A 241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLG---ISADLTTLGKYIGG-GMSFGAFGG 313 (465)
Confidence 5566799654 67889999999999999999999999 643 22 22222222 22335589999886 999999988
Q ss_pred eCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~ 309 (311)
+. ++++.+.. +...+++.|+++|+++.+.|+
T Consensus 314 ~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~ 350 (465)
T 2yky_A 314 RR--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALT 350 (465)
Confidence 64 36666655 233467889999998876664
No 216
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.78 E-value=7.2e-19 Score=164.31 Aligned_cols=202 Identities=12% Similarity=0.054 Sum_probs=142.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547 89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 165 (311)
..++.+.+.+++.+.+|.+ .+ +++|+|++ .++.+++.++.. +| +.|+++.+.|..+...++..|++++.++..
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~-~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGS-NVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCC-CEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 4566677777777766654 34 99999999 566656665543 66 789999999999999999999999998864
Q ss_pred C-CCCcccCHHHHHhhc-C----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547 166 P-ERGWEVDLEAVEALA-D----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM 239 (311)
Q Consensus 166 ~-~~~~~~d~~~l~~~l-~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~ 239 (311)
+ .+++.+|+++|++.+ + .++.++++++|+||||.+.+ +++|.++|+++|+++++|++|+...++-.+ ...
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~-~~~ 282 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLE-KLK 282 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HHH
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhH-HHH
Confidence 3 456789999999988 4 36677788999999999988 999999999999999999999865431001 111
Q ss_pred cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhh
Q 021547 240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFL 307 (311)
Q Consensus 240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~ 307 (311)
..+.. ...+++.|++|++ ..+.++||+++.++ ++++.+..... .....+.+.+.++...
T Consensus 283 ~~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~~-------~~~~~l~~~~~g~~~~~~~~~~~aal~~ 342 (456)
T 2z67_A 283 KAFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTDA-------EFIKEISLSYPGRASATPVVNTLVSLLS 342 (456)
T ss_dssp HHHTS-CCSEEEEEHHHHH-CCCSSCEEEEESCH-------HHHHHHHTTSCSCBCSHHHHHHHHHHHH
T ss_pred HhhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcCH-------HHHhhcCcCCCCCCCCCHHHHHHHHHHH
Confidence 11111 1226788999974 45589999998543 35666544322 1112224445554443
No 217
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.77 E-value=2.5e-18 Score=157.60 Aligned_cols=195 Identities=10% Similarity=-0.002 Sum_probs=125.3
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHH
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCME 121 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~ 121 (311)
.+.+++|+.|. .++++.+++++.+..... ....+.+ ...++.+.+.+++.+.+|.+ .+++|++ |+|+++
T Consensus 38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~ 108 (398)
T 2fyf_A 38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA 108 (398)
T ss_dssp SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence 34567777553 467888988887631110 1112222 22234444555555444543 3468998 999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHc--CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWPF-YESFAKRN--HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
++.+++.+++++| .+++..+.|.. ....+... |.+++.++.+ .+...+. .++++++++++++|+||||
T Consensus 109 al~~~~~~l~~~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG 179 (398)
T 2fyf_A 109 FWDAAAFGLIDKR--SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTG 179 (398)
T ss_dssp HHHHHHHHTCSSC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTT
T ss_pred HHHHHHHHhcCCC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcc
Confidence 9999999998776 23333333321 12245556 7888888764 2332332 2567899999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
.+++.+++.++ +|+++|+|++|+.+.. ...+.. ..+++.|+||.++.+| ++||+++++
T Consensus 180 ~~~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~ 237 (398)
T 2fyf_A 180 VAVAVRRPEGS------DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP 237 (398)
T ss_dssp EECCCCCCTTC------C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH
T ss_pred eecchHHhhhh------cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEECH
Confidence 99995555544 7999999999986432 112221 2388999999998886 599998853
No 218
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=157.15 Aligned_cols=200 Identities=12% Similarity=0.052 Sum_probs=151.7
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC--------CCEEEeCChHHHHHHHHHHHhc---
Q 021547 64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA--------DDIYITLGCMEAVEIILTVITR--- 132 (311)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~--------~~v~~t~g~~~a~~~~~~~l~~--- 132 (311)
+..+.+.+...+..+ ...|...++..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+...
T Consensus 92 ~~~~~~~~~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINCL-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCCC-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcc-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 344555555555443 3478888899999999999999988875432 3678999999999887776642
Q ss_pred ----------------CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEE
Q 021547 133 ----------------LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TAAIVI 190 (311)
Q Consensus 133 ----------------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i 190 (311)
++ +.|+++.+.|..+...++..|.+++.++.+ .++.+|+++|+++++++ +.++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~ 247 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNAR-LVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCA 247 (481)
T ss_dssp HHHHHHCTTSCHHHHHTT-EEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHhhhcCcccccccccCC-eEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 45 799999999999999999999999999864 56789999999988653 567788
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+.++|++|.+-+ +++|+++|++||+|+++|++|+...+....... +..+ .....+..+++|+++.| ..+|+++
T Consensus 248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p-~g~g~l~ 321 (481)
T 4e1o_A 248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGI--EYADSFTFNPSKWMMVH-FDCTGFW 321 (481)
T ss_dssp EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSCC-SSCEEEE
T ss_pred ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCc--ccCCEEEEChHHhcCCC-CceEEEE
Confidence 889999999877 999999999999999999999875332211111 1111 01126677999997776 5678888
Q ss_pred eeCC
Q 021547 270 TNDP 273 (311)
Q Consensus 270 ~~~~ 273 (311)
+.++
T Consensus 322 ~~~~ 325 (481)
T 4e1o_A 322 VKDK 325 (481)
T ss_dssp ESBH
T ss_pred EeCH
Confidence 7653
No 219
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.76 E-value=1.6e-17 Score=155.84 Aligned_cols=223 Identities=9% Similarity=-0.045 Sum_probs=133.1
Q ss_pred hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHH
Q 021547 25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA------PMFGLPLARRAVAE 98 (311)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~ 98 (311)
...|..+++.-.++ ....|.|-.+. .++++.|+++|...+......+|+ ...-..++++...+
T Consensus 39 d~~~~~~~~~e~~r-----q~~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~ 107 (490)
T 2a7v_A 39 DPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR 107 (490)
T ss_dssp CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----HHcCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHH
Confidence 33466666543322 23556666543 236899999998877532211222 12223466644445
Q ss_pred HHhhcCCCCCCCCC---EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCcEEEEeecc-C
Q 021547 99 YLNRDLPYKLSADD---IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES--------FAKRNHIEVRHFDLL-P 166 (311)
Q Consensus 99 ~l~~~~g~~~~~~~---v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~ 166 (311)
++.+.+|. +.+. .++++||++|+.+++.+++++| |+|+++.+.|.++.. .+...|..+..+++. .
T Consensus 108 ~~a~l~g~--~~~~~~~~v~~~sGt~An~~al~al~~pG-D~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd 184 (490)
T 2a7v_A 108 RALEAFDL--DPAQWGVNVQPYSGSPANLAVYTALLQPH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp HHHHHTTC--CTTTEEEECCCSSHHHHHHHHHHHHCCSC-EECCC-------------------------------CCBC
T ss_pred HHHHHcCC--CcccCceEEeCCchHHHHHHHHHHHcCCC-CEecccCccccccccchhhhcchhHHHcCCeEEEEecccc
Confidence 55555553 3332 3455678999999999999999 999999998865321 233455444333332 1
Q ss_pred CCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCC
Q 021547 167 ERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 167 ~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~ 244 (311)
..++.+|++++++.+. .++++++++.++||+ ..+ +++|.++|+++|+++++|++|. ++.+.|..+.++..
T Consensus 185 ~~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~--- 256 (490)
T 2a7v_A 185 PKTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--- 256 (490)
T ss_dssp TTTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGT---
T ss_pred cccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCC---
Confidence 2457899999999875 478888888888875 445 8999999999999999999975 44444433334321
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATNDP 273 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~ 273 (311)
..+++.|+||++ .|.|.|++++++.
T Consensus 257 --aDiv~~S~hK~l--~Gp~GG~i~~~~~ 281 (490)
T 2a7v_A 257 --ADIVTTTTHKTL--RGARSGLIFYRKG 281 (490)
T ss_dssp --CSEEEEESSGGG--CSCSCEEEEEECS
T ss_pred --CCEEEECCcccC--ccccchheeeccc
Confidence 228899999986 4667799998753
No 220
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.76 E-value=2.5e-17 Score=162.17 Aligned_cols=171 Identities=11% Similarity=0.024 Sum_probs=131.3
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 167 (311)
-+.++++.++++++. + +.+++++|+++++.+++.+++++| |+|+++.|+|.++...+...|++++.++....
T Consensus 206 ~v~~~ee~la~l~G~------d-~~i~~~~Gtt~a~~~~i~al~~~G-D~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 206 AFGESEKYAARVFGA------D-RSWSVVVGTSGSNRTIMQACMTDN-DVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN 277 (755)
T ss_dssp HHHHHHHHHHHHHTC------S-EEEEESSHHHHHHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHHCCEEEEECCCBC
T ss_pred HHHHHHHHHHHHhCC------C-ceEEECCcHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHcCCEEEEEeCCCC
Confidence 346777888887742 2 457889999999999999999999 99999999999998889999999999886532
Q ss_pred CCcc----c-----CHHHHHhhcCC--Ccc--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 168 RGWE----V-----DLEAVEALADE--NTA--------AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 168 ~~~~----~-----d~~~l~~~l~~--~~~--------~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
+++ + |++.|++++++ +++ ++++++| ||+|.+.+ +++|+++|++||+++++|++|+.
T Consensus 278 -~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~ 352 (755)
T 2vyc_A 278 -RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_dssp -TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCT
T ss_pred -ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCch
Confidence 222 4 99999998753 344 8899998 79999988 99999999999999999999985
Q ss_pred C-ccCCC--CCCcccc--cC-CCCCeEEEecCcccCCCCcce-eeEEEeeCC
Q 021547 229 L-AFGST--PYIPMGV--FG-SIVPVITLGSISKRWIVPGWR-FGWLATNDP 273 (311)
Q Consensus 229 ~-~~~~~--~~~~~~~--~~-~~~~~i~i~s~sK~~~~~G~r-~G~i~~~~~ 273 (311)
. .+++. +..++.. .+ ...++|++.|+||+ ++|.+ .|++++++.
T Consensus 353 ~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 353 YARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREG 402 (755)
T ss_dssp TGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECC
T ss_pred hcccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCc
Confidence 3 33321 1223211 12 24468899999998 45666 566666554
No 221
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.75 E-value=1.1e-17 Score=163.44 Aligned_cols=173 Identities=13% Similarity=0.050 Sum_probs=131.2
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCcEEEEee
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-AKRNHIEVRHFD 163 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~~~~~~~ 163 (311)
+..-+.++++.++++++. + ..+++++|+++++.+++.+++++| |+|+++.++|.++... ++..|++++.++
T Consensus 171 ~~~~i~e~e~~lA~~~ga------e-~~i~v~nGtt~an~~ai~al~~pG-D~VLv~~~~H~S~~~~~~~l~Ga~~v~v~ 242 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNA------D-KTYFVLGGSSNANNTVTSALVSNG-DLVLFDRNNHKSVYNSALAMAGGRPVYLQ 242 (730)
T ss_dssp TBTHHHHHHHHHHHHTTC------S-EEEEESSHHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHTTTTCCEEEEEC
T ss_pred ChHHHHHHHHHHHHHHCC------C-cEEEECCHHHHHHHHHHHHhcCCC-CEEEEcCCchHHHHHHHHHHCCCEEEEEe
Confidence 334467899999998842 2 347888998999999999999999 9999999999988887 888999999887
Q ss_pred ccCCCC----cccCHHHH-----HhhcCCC------c----cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 164 LLPERG----WEVDLEAV-----EALADEN------T----AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 164 ~~~~~~----~~~d~~~l-----~~~l~~~------~----~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
.... . +.+|+++| +++++++ + +++++++| ||+|.+.+ +++|+++|+++|+++|+|+
T Consensus 243 ~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDe 317 (730)
T 1c4k_A 243 TNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDS 317 (730)
T ss_dssp EEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred CCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEc
Confidence 6432 2 23688888 8888765 4 88999998 58999988 9999999999999999999
Q ss_pred cccC-CccCCC-C-CCccc--ccC-CCCCeEEEecCcccCCCCcceee-EEEeeC
Q 021547 225 VYGH-LAFGST-P-YIPMG--VFG-SIVPVITLGSISKRWIVPGWRFG-WLATND 272 (311)
Q Consensus 225 ay~~-~~~~~~-~-~~~~~--~~~-~~~~~i~i~s~sK~~~~~G~r~G-~i~~~~ 272 (311)
+|+. +.|++. + ..++. .+. ++.+++++.|+||. ++|++.| ++++++
T Consensus 318 Ah~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~ 370 (730)
T 1c4k_A 318 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKD 370 (730)
T ss_dssp TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEEC
T ss_pred ccccccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecc
Confidence 9974 334321 1 11221 112 23467999999998 4566654 554544
No 222
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.74 E-value=4.6e-17 Score=148.31 Aligned_cols=168 Identities=14% Similarity=0.208 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH--HHHHHcCc--EEEEeeccC
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE--SFAKRNHI--EVRHFDLLP 166 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~ 166 (311)
++.+.+++.+.+.+|.. +.+++|+|+++++++++..+ .+| |+|++..+.|.++. ..++..|. +++.++...
T Consensus 35 ~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~-~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL-TID-EDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH-CTT-CEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC-CCC-CeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 44444444444444432 67899999999999988655 689 99999999997653 45555664 677776532
Q ss_pred C------CC-cccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547 167 E------RG-WEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 167 ~------~~-~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~ 238 (311)
. .. ..+|++++++.++ ++++++++++++||+|..++.+++++|.++|++||+++|+|++++ . +. +..
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~ 184 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLD 184 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCC
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-ccc
Confidence 1 11 2479999999885 478999999999999999999999999999999999999999986 2 22 222
Q ss_pred ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+..+. ..+++.|++|.++.+ .++|+++++.
T Consensus 185 ~~~~~---~d~~~~s~~K~l~~~-~g~g~~~~~~ 214 (379)
T 3ke3_A 185 MKELG---IDVLISAPQKGWSST-PCAGLVMLSA 214 (379)
T ss_dssp HHHHT---CSEEEECTTTTTCSC-CCEEEEEECH
T ss_pred ccccC---CCEEEecchhhcCCC-CceEEEEECH
Confidence 22222 238889999987554 4589988753
No 223
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.73 E-value=7.1e-17 Score=151.52 Aligned_cols=199 Identities=12% Similarity=0.017 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-------CCEEEeCChHHHHHHHHHHHhc-----
Q 021547 65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-------DDIYITLGCMEAVEIILTVITR----- 132 (311)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-------~~v~~t~g~~~a~~~~~~~l~~----- 132 (311)
..+.+.+...+..+. ..|...++..++++.+.+|+.+.+|.+... ...++|+|+|+++..++.+...
T Consensus 88 ~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 344455555554433 368777889999999999999988875421 3688999999998877776631
Q ss_pred --------------CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEEeC
Q 021547 133 --------------LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TAAIVIIN 192 (311)
Q Consensus 133 --------------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~ 192 (311)
++ +.|+++...|..+...++..|.+++.++.+ .++ +|+++|++.++++ +.+++++.
T Consensus 167 ~~~~~~~~~~~~~~~~-~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~ 242 (475)
T 3k40_A 167 VKELHPEWDEHTILGK-LVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTL 242 (475)
T ss_dssp HHHHCTTSCHHHHHHH-EEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhccCcccccccccCC-eEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence 34 689999999999999999999999999874 456 9999999988653 56778888
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271 (311)
Q Consensus 193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~ 271 (311)
++|++|.+.+ +++|+++|++||+|+++|++|+...+....... +..+ .....+..+++|+++.| ..+|++++.
T Consensus 243 ~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi--~~~Ds~~~~~hK~l~~p-~g~g~l~~~ 316 (475)
T 3k40_A 243 GTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGI--ESADSFNFNPHKWMLVN-FDCSAMWLK 316 (475)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred cCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCc--ccCCEEEECchhccCCC-CceEEEEEe
Confidence 9999999987 999999999999999999999874332111111 1111 01136778999986655 668888887
Q ss_pred CCC
Q 021547 272 DPN 274 (311)
Q Consensus 272 ~~~ 274 (311)
++.
T Consensus 317 ~~~ 319 (475)
T 3k40_A 317 DPS 319 (475)
T ss_dssp SGG
T ss_pred CHH
Confidence 654
No 224
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.73 E-value=2.3e-17 Score=154.73 Aligned_cols=248 Identities=13% Similarity=0.003 Sum_probs=159.8
Q ss_pred CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547 42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118 (311)
Q Consensus 42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g 118 (311)
.+++.+|||..|......+ ..+|.+.+++.+++... ....|.. ....++++.+++.+.+..+. ..++|++++|
T Consensus 60 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v~f~~s 135 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQLITMAC 135 (472)
T ss_dssp TTSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEEEEESS
T ss_pred CCCCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEEEEeCC
Confidence 3578899998875432211 26899999998875321 1113433 34578999999988765532 4678999999
Q ss_pred hHHHHHHHHHHHh-------c------------------CC--CCEEEecCCCCcchHHHH-HHcCcE--------E---
Q 021547 119 CMEAVEIILTVIT-------R------------------LG--AANILLPRPGWPFYESFA-KRNHIE--------V--- 159 (311)
Q Consensus 119 ~~~a~~~~~~~l~-------~------------------~g--~d~Vl~~~p~~~~~~~~~-~~~g~~--------~--- 159 (311)
+++|++.+++.+. . +| .++|++.++.|.++...+ ...|.. .
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 9999999998874 1 24 389999999998765444 232321 0
Q ss_pred EEeeccCC--C---C--c-----ccCHHHHHhhcCC------CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEE
Q 021547 160 RHFDLLPE--R---G--W-----EVDLEAVEALADE------NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 160 ~~~~~~~~--~---~--~-----~~d~~~l~~~l~~------~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~l 220 (311)
..+++... . . + ..|++.|++.+++ ++++|++...+|++|. ..+++.+++|.++|++||+++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 11121100 0 0 0 1267888888865 6777777666888996 568999999999999999999
Q ss_pred EEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCch
Q 021547 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTL 299 (311)
Q Consensus 221 i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 299 (311)
|+||+|.++.+.|. ...+..++.. ..+-+.||||.+ +.| ||++ + ++ +. .+... ...+.+.+++
T Consensus 296 i~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~-~~-------~~-~~~~~~~~~T~~~~~~ 359 (472)
T 1ohv_A 296 LVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-K-EE-------FR-PNAPYRIFNTWLGDPS 359 (472)
T ss_dssp EEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-C-GG-------GS-CSSSSSSCCSSSSCHH
T ss_pred EEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-c-hh-------hc-ccccccccCccCccHH
Confidence 99999997665543 2233333211 002234899985 445 7765 2 21 21 11222 2334577899
Q ss_pred hHHHHHhhhh
Q 021547 300 IQVCEMFLLV 309 (311)
Q Consensus 300 ~q~~~~~~l~ 309 (311)
+|+++.+.|+
T Consensus 360 ~~aaa~aal~ 369 (472)
T 1ohv_A 360 KNLLLAEVIN 369 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887664
No 225
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.70 E-value=2e-16 Score=153.70 Aligned_cols=172 Identities=15% Similarity=0.076 Sum_probs=127.2
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
+..-+.++++.+|++++. ...+++++|++.|+.+++.+++++| |+|+++.++|.++...+...|++++.++.
T Consensus 193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pG-D~VLv~r~~H~S~~~~l~lsGa~pv~v~~ 264 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAG-STILIDRNCHKSLTHLMMMSDVTPIYFRP 264 (715)
T ss_dssp TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHSCCEEEEECC
T ss_pred CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCC-CEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence 333457899999999942 2346677887899999999999999 99999999999999999999999999986
Q ss_pred cCCCCccc---------CHHHHHhhcCC--Ccc---EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 165 LPERGWEV---------DLEAVEALADE--NTA---AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 165 ~~~~~~~~---------d~~~l~~~l~~--~~~---~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.. +.+++ |++.|++++++ +++ ++++++| |++|.+++ +++|.++|+++ .+++|++|+...
T Consensus 265 ~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~ 337 (715)
T 3n75_A 265 TR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYT 337 (715)
T ss_dssp CB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTG
T ss_pred cc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEcccccccc
Confidence 53 34443 89999998863 334 7999999 99999999 77888888765 379999998643
Q ss_pred -cCCC-C-CCcccccCCCCC-eEEEecCcccCCCCcc-eeeEEEeeCC
Q 021547 231 -FGST-P-YIPMGVFGSIVP-VITLGSISKRWIVPGW-RFGWLATNDP 273 (311)
Q Consensus 231 -~~~~-~-~~~~~~~~~~~~-~i~i~s~sK~~~~~G~-r~G~i~~~~~ 273 (311)
|++. + ...+..-...+. +++++|+||+++ |+ ..|++++++.
T Consensus 338 ~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~ 383 (715)
T 3n75_A 338 NFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (715)
T ss_dssp GGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred ccCCccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence 4321 1 112211001123 367999999954 44 3588887654
No 226
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.68 E-value=7.7e-16 Score=142.93 Aligned_cols=194 Identities=23% Similarity=0.298 Sum_probs=125.3
Q ss_pred eecCCCCCCCCCCCCCcHHHHHHH--HHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547 48 IPLGHGDPAAFPCFRTAAVAEDAI--VDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123 (311)
Q Consensus 48 i~~~~g~p~~~~~~~~~~~~~~a~--~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~ 123 (311)
..++.|.++ ...|+.+.+++ .+.... +..|.+ ..|..++.+.+.+++.+.+| .+.+++++++|++.++
T Consensus 67 ~~~~~g~~~----~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa~ 138 (438)
T 1wyu_A 67 AFLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATALA 138 (438)
T ss_dssp CCCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHH
T ss_pred cccCCCccC----CcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHHH
Confidence 345555533 45566664444 222221 123321 33544444444444444344 3456789999999555
Q ss_pred HHHHHHH-hcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 124 EIILTVI-TRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
+++..++ .++| |+|+++.+.|+.+...+ +..|++++.++. +++.+|+++ ++++++++++++| ||||
T Consensus 139 ea~~~a~~~~~g-d~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~---~~~~~d~~~----i~~~t~~v~i~~p-n~tG 209 (438)
T 1wyu_A 139 EGVLLALRETGR-MGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL---EGGRTPLPE----VGEEVGAVVVQNP-NFLG 209 (438)
T ss_dssp HHHHHHHHHHTC-CEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC---BTTBCCCCC----CCTTEEEEEEESS-CTTS
T ss_pred HHHHHHHhcCCC-CEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC---cCCccCHHH----hCCCeEEEEEECC-CCCe
Confidence 5444443 4688 99999999999887544 558999999986 235677665 6778999999999 9999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEecc---ccCCccCCCCCCcccccCCCCCeEEEecCcccCC----CCcceeeEEEee
Q 021547 199 NVLTYQHLQKIAETARKLGILVIADEV---YGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI----VPGWRFGWLATN 271 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D~a---y~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~----~~G~r~G~i~~~ 271 (311)
.+.+ +++|.++|+++|+++|+|.. ++.+ .. + ..+. ..+++.| +|.|+ +.|.++||++++
T Consensus 210 ~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~-----~~-~-~~~g---~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~ 275 (438)
T 1wyu_A 210 ALED---LGPFAEAAHGAGALFVAVADPLSLGVL-----KP-P-GAYG---ADIAVGD-GQSLGLPMGFGGPHFGFLATK 275 (438)
T ss_dssp BCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB-----CC-H-HHHT---CSEEEEE-CTTTTCCCGGGCSCCEEEEEC
T ss_pred EEec---HHHHHHHHHHcCCEEEEEechhhccCc-----CC-C-ccCC---CCEEEEC-CcccCCCccCCCCCeeEEEEc
Confidence 9997 99999999999999996632 3321 11 1 2222 1266666 66554 456799999986
Q ss_pred C
Q 021547 272 D 272 (311)
Q Consensus 272 ~ 272 (311)
+
T Consensus 276 ~ 276 (438)
T 1wyu_A 276 K 276 (438)
T ss_dssp G
T ss_pred H
Confidence 4
No 227
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.46 E-value=6.5e-13 Score=119.90 Aligned_cols=191 Identities=10% Similarity=0.024 Sum_probs=128.8
Q ss_pred CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC---C--CC-----CCCcHHHHHHHHHHHhhcCCCCCC-CCC
Q 021547 44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC---Y--AP-----MFGLPLARRAVAEYLNRDLPYKLS-ADD 112 (311)
Q Consensus 44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~---Y--~~-----~~g~~~lr~~ia~~l~~~~g~~~~-~~~ 112 (311)
..++++|+-|- .+.++.|+++|.+.+.....+. | .. ..-+.+.|+.++++++ +. +++
T Consensus 3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~ 70 (361)
T 3m5u_A 3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYE 70 (361)
T ss_dssp -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEE
T ss_pred ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCce
Confidence 45778888875 5778999999998764211001 1 11 1224567777888884 33 447
Q ss_pred EEE-eCChHHHHHHHHHHHhcCCCCEEE-ecCCCCc-chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547 113 IYI-TLGCMEAVEIILTVITRLGAANIL-LPRPGWP-FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV 189 (311)
Q Consensus 113 v~~-t~g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~ 189 (311)
|++ |+|+|+++++++..+. +| |+++ +....|. .....++..|.++..++.+....+..+++. + ++++++++.
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~-~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~ 145 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LN-GVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAY 145 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CS-SCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEE
T ss_pred EEEEcCcHHHHHHHHHHhcC-CC-CeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEE
Confidence 887 9999999999999998 78 7653 2222332 234566778999999987543222245555 3 888999999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547 190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269 (311)
Q Consensus 190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~ 269 (311)
+++..|.||..++. +++ +|+++++|.+++.. ..+..+..+ .+++.|.+|.+|.+| +|+++
T Consensus 146 ~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g----~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~ 205 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFF----SRKVDFSNI-----ALFYGGVQKNAGISG--LSCIF 205 (361)
T ss_dssp EESEETTTTEECSS--------CCC-CSSCEEEECGGGTT----SSCCCCTTE-----EEEEEETTTTSSCTT--CEEEE
T ss_pred EeCCCCCcceeCCc--------ccc-cCCEEEEEcccccC----CCCCCcccC-----CEEEEechhccCCCc--cEEEE
Confidence 99888899998762 233 49999999999862 223333322 278889999998777 56666
Q ss_pred ee
Q 021547 270 TN 271 (311)
Q Consensus 270 ~~ 271 (311)
+.
T Consensus 206 ~~ 207 (361)
T 3m5u_A 206 IR 207 (361)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.45 E-value=1.4e-13 Score=126.54 Aligned_cols=178 Identities=12% Similarity=-0.028 Sum_probs=125.2
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC----CCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL----GAANILLPRPGWPFYESFAKRNHIEVRHFD 163 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~----g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 163 (311)
+...+.+.+..++.+..|.+. ....++++|+|++..+.+.+.+++ + +.|+++..+|.++...+...|++++.++
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~aar~~~~~~-~~viv~r~aHkSv~kAl~l~Gl~p~~v~ 172 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLTLRHKRPKA-KYIIWPRIDQKSCFKSMVTAGFEPVVIE 172 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTC-CEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHHcchhhcCC-CEEEEECCcHHHHHHHHHHcCCeeEEEE
Confidence 455677888888887777643 234688888875544444444443 7 8999999999999999999999999987
Q ss_pred ccC-CCCcccCHHHHHhhcCC---CccEEEEeCCC-CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547 164 LLP-ERGWEVDLEAVEALADE---NTAAIVIINPC-NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 164 ~~~-~~~~~~d~~~l~~~l~~---~~~~i~i~~p~-nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~ 238 (311)
..+ .+.+.+|++.|++++++ +.+++++.+|+ +.+|.+-+ +++|+++|++||++++||+||+.......+. +
T Consensus 173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l-~ 248 (450)
T 3bc8_A 173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHL-I 248 (450)
T ss_dssp CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-H
T ss_pred eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhH-H
Confidence 643 34678999999998864 35666777764 56677777 9999999999999999999999633110011 1
Q ss_pred ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
-..+....-..++.|.+|++ ..-...+++.+.+
T Consensus 249 ~~a~~~~~AD~~v~S~HK~l-~a~~~~~~l~~rd 281 (450)
T 3bc8_A 249 QQGARVGRIDAFVQSLDKNF-MVPVGGAIIAGFN 281 (450)
T ss_dssp HHHHHHSCCCEEEEEHHHHH-SCCSSCEEEEESC
T ss_pred HHHhcccCCCEEEECCccCC-CchhccEEEEecC
Confidence 01110011126888999995 4445567776654
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.45 E-value=1.6e-13 Score=125.07 Aligned_cols=185 Identities=11% Similarity=-0.037 Sum_probs=128.2
Q ss_pred CCCcHHHHHHHHHHHhcC---CC-----CCCC--CCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-eCChHHHHHHHHH
Q 021547 61 FRTAAVAEDAIVDSVRSS---MF-----NCYA--PMFGLPLARRAVAEYLNRDLPYKLSA-DDIYI-TLGCMEAVEIILT 128 (311)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~---~~-----~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~-t~g~~~a~~~~~~ 128 (311)
.+.++.|+++|.+.+... .. ...+ ...-+.+.|+.++++++ +.. ++|++ |+|+|+++++++.
T Consensus 36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVPL 109 (386)
T ss_dssp CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHH
Confidence 467899999997765321 00 0111 13467889999999994 332 46887 6899999999999
Q ss_pred HHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC-CCHH
Q 021547 129 VITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALADENTAAIVIINPCNPCGNV-LTYQ 204 (311)
Q Consensus 129 ~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~ 204 (311)
.+.++| |+|++....+.. +...++..| ++..++.+ ...+..++++.++..+++++++|.+++..|.||.. .|
T Consensus 110 ~l~~~g-d~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p-- 185 (386)
T 3qm2_A 110 NLLGDK-TTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE-- 185 (386)
T ss_dssp HHCTTC-CEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC--
T ss_pred hccCCC-CeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc--
Confidence 999999 998755444433 334566778 88888764 12333367788888899999999988888899996 66
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+++|. +|+++++|.+++. |..+..+..++ +.+.|.+|.+|.+| +|++++..
T Consensus 186 -i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~ 236 (386)
T 3qm2_A 186 -TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE 236 (386)
T ss_dssp -CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred -hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence 55553 7999999999986 22334444442 46689999998666 67776654
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.43 E-value=1.5e-12 Score=120.73 Aligned_cols=235 Identities=14% Similarity=0.099 Sum_probs=150.5
Q ss_pred CCCCeeecCCCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547 43 DPRPVIPLGHGD-PAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121 (311)
Q Consensus 43 ~~~~~i~~~~g~-p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~ 121 (311)
+++.+|||..|. +... --.+|.+.+++.++++..... ..+.....++.+.+++.+ + ..+.|+++++|++
T Consensus 85 dG~~ylD~~~g~~~~~l--GH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE 154 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVY--GHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE 154 (454)
T ss_dssp TCCEEEESSGGGGTTTT--CSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred CCCEEEEccccHHhhcc--cCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence 478889987662 2211 226799999999998754321 222334455666666555 2 3578999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH------HcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEe
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK------RNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVII 191 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~ 191 (311)
|++.+++.... .|+++|+....+|.+...... ........+|. -|.+.+++.+.. ++.++++.
T Consensus 155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE 227 (454)
T 4ao9_A 155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE 227 (454)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence 99999887753 344789988888875321110 01112233322 277888877653 44555555
Q ss_pred CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547 192 NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270 (311)
Q Consensus 192 ~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~ 270 (311)
......|.+ .+++.+++|.++|++||+++|.||++.+ ..|.. .....+.-.++++ +++|.++ .|+.+|.+++
T Consensus 228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~-~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPH-GLANKLGIRSDLT---TLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTT-CHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEE
T ss_pred cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccc-cchhccCCCCcEE---EeccccC-CCCcceeeee
Confidence 445566754 5677799999999999999999999974 22221 1122333333444 7889964 5899999988
Q ss_pred eCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547 271 NDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~ 309 (311)
.. ++++.+... ...+++.+|++.+++.+.|+
T Consensus 301 ~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~ 336 (454)
T 4ao9_A 301 RA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLT 336 (454)
T ss_dssp CH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred HH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHH
Confidence 53 466665432 23456788998888777664
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=119.80 Aligned_cols=180 Identities=16% Similarity=0.090 Sum_probs=121.3
Q ss_pred HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcc
Q 021547 96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWE 171 (311)
Q Consensus 96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 171 (311)
+.+|++. .|++. ....++++|+|.++.+++.+.+++ |.|+||++..+|.++...+...|+++++++... .+...
T Consensus 122 ~ld~L~~-~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~ 199 (501)
T 3hl2_A 122 VLDIIKL-AGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELR 199 (501)
T ss_dssp HHHHHHH-TTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEE
T ss_pred HHHHHHH-cCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccC
Confidence 4455554 57663 335889999997777666666653 339999999999999999999999999998743 23578
Q ss_pred cCHHHHHhhcCC---CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCcccccCCCC
Q 021547 172 VDLEAVEALADE---NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIV 246 (311)
Q Consensus 172 ~d~~~l~~~l~~---~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~ 246 (311)
+|++.+++++++ +.++++++++ .|..|..-+ +++|+++|++||+++++|+||+... +...-+.....+. .
T Consensus 200 id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~G--r 274 (501)
T 3hl2_A 200 TDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVG--R 274 (501)
T ss_dssp ECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHS--C
T ss_pred CCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcC--C
Confidence 999999998864 3344454554 454445556 9999999999999999999999743 2111011111111 0
Q ss_pred CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547 247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL 290 (311)
Q Consensus 247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 290 (311)
-.+++.|.+|.+..| +..|.+...++ ++++++...+
T Consensus 275 AD~vVqS~HK~llvp-IGG~ii~~~d~-------e~l~~~~~~y 310 (501)
T 3hl2_A 275 IDAFVQSLDKNFMVP-VGGAIIAGFND-------SFIQEISKMY 310 (501)
T ss_dssp CCEEEEEHHHHHCCC-SSCEEEEESCH-------HHHHHHHHTS
T ss_pred CcEEEecccccceee-cCceEEEeCCH-------HHHHHHHHhC
Confidence 237889999997665 22234444443 3566654443
No 232
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=117.62 Aligned_cols=185 Identities=10% Similarity=-0.015 Sum_probs=130.7
Q ss_pred CCCCcHHHHHHHHHHHhcC---CCCCC--CC-----CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-eCChHHHHHHHH
Q 021547 60 CFRTAAVAEDAIVDSVRSS---MFNCY--AP-----MFGLPLARRAVAEYLNRDLPYKLSA-DDIYI-TLGCMEAVEIIL 127 (311)
Q Consensus 60 ~~~~~~~~~~a~~~~~~~~---~~~~Y--~~-----~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~-t~g~~~a~~~~~ 127 (311)
..+.|+.|.++|.+.+... ....+ .. ..-+.+.|+.++++++ +.. ++|++ |+|+|+++++++
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHH
Confidence 4788999999999887521 11011 11 1123567777787774 233 56888 589999999999
Q ss_pred HHHhcC--CCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547 128 TVITRL--GAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY 203 (311)
Q Consensus 128 ~~l~~~--g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~ 203 (311)
..+..+ | |+|++...++.. +...++..|..++.++.+ .++..+++.++..++++++++.+++..|.||...|
T Consensus 95 ~~l~~~~~G-d~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~p- 170 (377)
T 3e77_A 95 LNLIGLKAG-RCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFD- 170 (377)
T ss_dssp HHHGGGSTT-CEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECS-
T ss_pred HhccCCCCC-CeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEch-
Confidence 999875 8 999877665543 234566778777666543 34456777777788889999999988899999998
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
+ +|+++|+++++|.+++. |..+..+..++ +.+.|.+|.+|.+| +|++++..
T Consensus 171 --i-----i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~ 221 (377)
T 3e77_A 171 --F-----IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRD 221 (377)
T ss_dssp --S-----CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEET
T ss_pred --h-----hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcH
Confidence 3 46788999999999986 22333444332 57789999998777 56666654
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.36 E-value=3.3e-11 Score=111.98 Aligned_cols=248 Identities=19% Similarity=0.191 Sum_probs=151.4
Q ss_pred CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547 43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120 (311)
Q Consensus 43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~ 120 (311)
+++.+|||..|.-.. ..--.+|.+.+++.+++....... +.+. +....+++.+.+..+ .-..+.++++++|+
T Consensus 62 dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~----~~~~~lae~L~~~~p-~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVT-SVGASDPAVVAAVQEAAAHFTHTCFMVTPY----EGYVAVTEQLNRLTP-GDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTC-TTCTTCHHHHHHHHHHHHHCSCCTTTTSCC----HHHHHHHHHHHHHSS-CSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHH-hcCCCCHHHHHHHHHHHhhccCcccCccCc----HHHHHHHHHHHHhCC-CCCCcEEEEeCChH
Confidence 478888987661110 012357899999999887532111 1122 222334444443322 11245799999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC-------------cEEEEeeccCC----CCcccCHH------
Q 021547 121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH-------------IEVRHFDLLPE----RGWEVDLE------ 175 (311)
Q Consensus 121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~----~~~~~d~~------ 175 (311)
+|++.+++.... .|+.+|+....+|.+....+. ..+ ..+..+|.... .....+.+
T Consensus 136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (456)
T 4atq_A 136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI 215 (456)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence 999998887643 444789988888876433222 111 12333432110 00011222
Q ss_pred -HHHhhcCC-CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547 176 -AVEALADE-NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG 252 (311)
Q Consensus 176 -~l~~~l~~-~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~ 252 (311)
.+++.+.. ++.++++.......|.+ .+++.+++|.++|++||+++|.||++.++...|. ......++-.++++
T Consensus 216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~-~~a~e~~gv~PDiv--- 291 (456)
T 4atq_A 216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE-WFAVDHEGVVPDII--- 291 (456)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTCCCSEE---
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc-cccccccCCCCchh---
Confidence 22333333 34445555445556764 5677899999999999999999999998766664 33444454444555
Q ss_pred cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547 253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 309 (311)
+++|.+ ..|+.+|.+++.. ++++.+... .+.+++.++++.+++.+.|+
T Consensus 292 t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 292 TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 678995 4789999999854 366665544 34578889999998887764
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.34 E-value=7.3e-11 Score=110.10 Aligned_cols=252 Identities=14% Similarity=0.054 Sum_probs=153.1
Q ss_pred cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-cHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547 41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG-LPLARRAVAEYLNRDLPYKLSADDIYITLGC 119 (311)
Q Consensus 41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~ 119 (311)
+.+++.+|||..|--... .--.+|.+.+++.+++.... .|....+ ..+....+++.|.+..+ ...+.|+++++|
T Consensus 63 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sG 137 (473)
T 4e3q_A 63 DVNGRRYLDANSGLWNMV-AGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSG 137 (473)
T ss_dssp ETTCCEEEETTTTTTTCT-TCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSH
T ss_pred eCCCCEEEEcccCHHHhh-ccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCch
Confidence 346899999987732211 12357899999999887532 2222111 22334446666655433 234689999999
Q ss_pred HHHHHHHHHHHh-------cCCCCEEEecCCCCcchHH-HHHHcCc-----------EEEEeeccCC---CCcccC----
Q 021547 120 MEAVEIILTVIT-------RLGAANILLPRPGWPFYES-FAKRNHI-----------EVRHFDLLPE---RGWEVD---- 173 (311)
Q Consensus 120 ~~a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~-~~~~~g~-----------~~~~~~~~~~---~~~~~d---- 173 (311)
++|++.+++... .+++.+|+....+|.+... .+...+- ....++.... ......
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 999999988753 2444678888888876322 2222221 1222221100 000011
Q ss_pred ----HHHHHhhcC---CCccEEEEe-CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547 174 ----LEAVEALAD---ENTAAIVII-NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS 244 (311)
Q Consensus 174 ----~~~l~~~l~---~~~~~i~i~-~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~ 244 (311)
.+++++.+. .+..+.++. ......|.+ .+++-+++|.++|++||+++|.||+..++...|.- .....++-
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~-fa~e~~gv 296 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT-WGCVTYDF 296 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSS-CHHHHTTC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccch-hHHHhcCC
Confidence 223344332 233444444 446666765 45667999999999999999999999998655542 23334444
Q ss_pred CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547 245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~ 309 (311)
.++++ +++|.++..++++|.+++.+ ++.+.+... .+.+++.+|++.+++.+.|+
T Consensus 297 ~PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~ 358 (473)
T 4e3q_A 297 TPDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID 358 (473)
T ss_dssp CCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred CCChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhh
Confidence 44555 67999765559999999854 466665431 34567889999888877664
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.26 E-value=1.6e-10 Score=114.70 Aligned_cols=248 Identities=12% Similarity=-0.020 Sum_probs=146.1
Q ss_pred CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547 46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI 125 (311)
Q Consensus 46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 125 (311)
.++||..|--....+...+|.+.+++.+++..-.. +.......+....+++.|.+..+.+ ..+.++++++|++|++.
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h--~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~ 457 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGH--VMFPENVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEI 457 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSS--CCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhccc--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHH
Confidence 56666654100011122279999999998864211 1111111233345666665533311 14689999999999998
Q ss_pred HHHHHh-----cC-----------CCCEEEecCCCCcchH-HHHHHcCc---------------EE-------------E
Q 021547 126 ILTVIT-----RL-----------GAANILLPRPGWPFYE-SFAKRNHI---------------EV-------------R 160 (311)
Q Consensus 126 ~~~~l~-----~~-----------g~d~Vl~~~p~~~~~~-~~~~~~g~---------------~~-------------~ 160 (311)
+++... .. ++.+||.....|.+-. ..+...|. .+ .
T Consensus 458 AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 537 (831)
T 4a0g_A 458 ALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSW 537 (831)
T ss_dssp HHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEE
T ss_pred HHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCce
Confidence 887762 11 3357888887776532 22232221 00 0
Q ss_pred EeeccCC------CC-cccC------------------HHHHHhhcC-------C-CccEEEEeCC-CCCCccCC-CHHH
Q 021547 161 HFDLLPE------RG-WEVD------------------LEAVEALAD-------E-NTAAIVIINP-CNPCGNVL-TYQH 205 (311)
Q Consensus 161 ~~~~~~~------~~-~~~d------------------~~~l~~~l~-------~-~~~~i~i~~p-~nptG~~~-~~~~ 205 (311)
.++.... +. ..-+ .+.|++.+. . ++.++++... ++..|... +++.
T Consensus 538 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~ 617 (831)
T 4a0g_A 538 NISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF 617 (831)
T ss_dssp EEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred EecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence 1111100 00 0001 256677664 2 3444555543 67777754 7888
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHH
Q 021547 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVG 284 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~ 284 (311)
+++|.++|++||+++|+||++.++...|..+ ....+.-.++++ +++|.++. | +++|++++++ ++++
T Consensus 618 L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~i~~ 684 (831)
T 4a0g_A 618 QRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------AVFD 684 (831)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------HHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------HHHH
Confidence 9999999999999999999999887666543 333333333444 79999765 6 8999999864 3666
Q ss_pred HHhhh-------hccccCCCchhHHHHHhhhh
Q 021547 285 SIKAC-------LGVRSGPSTLIQVCEMFLLV 309 (311)
Q Consensus 285 ~~~~~-------~~~~~~~~~~~q~~~~~~l~ 309 (311)
.+... ...+++.+|++++++.+.|+
T Consensus 685 ~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~ 716 (831)
T 4a0g_A 685 SFSGDSKLKALLHGHSYSAHAMGCATAAKAIQ 716 (831)
T ss_dssp TTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred HHhcccccccceeecCCcccHHHHHHHHHHHH
Confidence 65431 33567889999988887664
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.17 E-value=1.6e-09 Score=98.53 Aligned_cols=224 Identities=10% Similarity=-0.016 Sum_probs=139.3
Q ss_pred hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHH
Q 021547 23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAV 96 (311)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~i 96 (311)
....+|.++++.-.++ ...-|+|=-.. -..++.+++++...+.+-..-+ |....-+.++++..
T Consensus 37 ~~Dpei~~~i~~E~~R-----Q~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la 105 (490)
T 3ou5_A 37 DSDPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLC 105 (490)
T ss_dssp HHCHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHH-----HHcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHH
Confidence 4556777777654333 33446654443 2457888888877664321112 33344456666666
Q ss_pred HHHHhhcCCCCCCCC--CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH--------HHHcC--cEEEEeec
Q 021547 97 AEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF--------AKRNH--IEVRHFDL 164 (311)
Q Consensus 97 a~~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~ 164 (311)
.+..++.||.....- ||-.- +++.|+.+++.+|++|| |+|+..+..+.+.... ....| ++...+++
T Consensus 106 ~~rak~lF~a~~A~w~VNVQP~-SGs~AN~avy~All~PG-D~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v 183 (490)
T 3ou5_A 106 QRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL 183 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCS-SHHHHHHHHHHHHCC-C-CCEECBC----------------------------CBCE
T ss_pred HHHHHHHhCCCccccCCCCCcC-CHHHHHHHHHHHHcCCC-CEEEecccCCCCcccccccCCCccccccccccccccccc
Confidence 666777676543221 44444 45779999999999999 9999887766554321 11222 24445554
Q ss_pred cCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCccccc
Q 021547 165 LPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVF 242 (311)
Q Consensus 165 ~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~ 242 (311)
++ ++..+|.|.+++... .++++|+.-...+|. .++ .+++.++|++-|.++++|.+|. +|+-.|.-+.|+..-
T Consensus 184 d~-~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~A 257 (490)
T 3ou5_A 184 NP-KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA 257 (490)
T ss_dssp ET-TTTEECHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC
T ss_pred CC-CCCcccHHHHHHHHhhcCCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCccccc
Confidence 33 456899999999654 488888877666665 345 8999999999999999999996 466666555555432
Q ss_pred CCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547 243 GSIVPVITLGSISKRWIVPGWRFGWLATND 272 (311)
Q Consensus 243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~ 272 (311)
.|+.+|.+|+ ++|-|-|.|++.+
T Consensus 258 -----DvVTtTTHKT--LrGPrGG~Il~~~ 280 (490)
T 3ou5_A 258 -----DIVTTTTHKT--LRGARSGLIFYRK 280 (490)
T ss_dssp -----SEEEEESSST--TCSCSCEEEEEEC
T ss_pred -----eEEecccccc--ccCCCceEEEecc
Confidence 1889999998 6788989998865
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=83.05 E-value=3.5 Score=38.38 Aligned_cols=113 Identities=17% Similarity=0.199 Sum_probs=69.4
Q ss_pred CCCCCCCEEEeCChHHHHHHHHHHHhc---C---------C-CC----EEEecCCCCc-------------------chH
Q 021547 106 YKLSADDIYITLGCMEAVEIILTVITR---L---------G-AA----NILLPRPGWP-------------------FYE 149 (311)
Q Consensus 106 ~~~~~~~v~~t~g~~~a~~~~~~~l~~---~---------g-~d----~Vl~~~p~~~-------------------~~~ 149 (311)
+.++++.|.++.+...++...+.+|.+ . | .- ..+...|.|. .+.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 345667888888877777766666642 1 1 00 1344566664 134
Q ss_pred HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
......+.+.-.+.+.++.+|.+..+.+.++-..... .....+.|..++.+++++|++.|++++|-||-
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 5666677777777776666666655443332211100 00122346679999999999999999998874
No 238
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=76.76 E-value=19 Score=26.14 Aligned_cols=101 Identities=7% Similarity=0.030 Sum_probs=62.8
Q ss_pred CEEEeCChHHHHHHHHHHH---hc--CCCCEEEecCCCCcchHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC
Q 021547 112 DIYITLGCMEAVEIILTVI---TR--LGAANILLPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l---~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+++....+..-+..++-.+ .. .+ ..|+...|.+..+.......|+. +..+.. .+-.-.+...|++++.
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~-r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~---~~~~d~lwa~EqaLrs 81 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDA-RWLTLIAPPASLTHEWLRRAGLNRERILLLQA---KDNAAALALSCEALRL 81 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSS-SEEEEESCCTTSCHHHHHHTTCCTTSEEEECC---SSHHHHHHHHHHHHHH
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccC-ccEEEECCCCCCCHHHHHHcCCChHHEEEEEC---CCcHHHHHHHHHHHhc
Confidence 3455444444444444433 32 44 56777777788889999999975 444443 2212234566778887
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
+....++.... .++..+.++|--.+++-+...+
T Consensus 82 g~~~aVl~wl~-----~l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 82 GRSHTVVSWLE-----PLSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp TCEEEEEECCS-----SCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCccEEEECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 77777776543 2677788888887777665543
No 239
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=75.98 E-value=9.4 Score=35.43 Aligned_cols=112 Identities=15% Similarity=0.200 Sum_probs=65.2
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhc---C---------CC----CEEEecCCCCc-------------------chHHH
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITR---L---------GA----ANILLPRPGWP-------------------FYESF 151 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~---~---------g~----d~Vl~~~p~~~-------------------~~~~~ 151 (311)
.++.+.|.++.+...++...+.+|.+ . +. ...+...|.|. .+...
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~ 182 (512)
T 1jak_A 103 DSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDR 182 (512)
T ss_dssp EEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHH
Confidence 34556788887777666666666532 1 10 12344456653 12345
Q ss_pred HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 152 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
....+.+...+.+.++.+|.+..+.+.++...... .......|..++.+++++|++.|++++|-||-
T Consensus 183 ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 183 VARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 55566777777666555666554433332111100 01112336789999999999999999999985
No 240
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=75.47 E-value=20 Score=29.65 Aligned_cols=99 Identities=10% Similarity=-0.004 Sum_probs=55.5
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 186 (311)
++...+++|.|++..=..+...|.+.| -+|++. ...-......++..|.+...+..+-. |.+.+++.+.....
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~G-a~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~i 80 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAG-AEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGF 80 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcC-CEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCC
Confidence 344445555555444467788888999 555544 33223445666777877777665422 33444555544333
Q ss_pred EEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 021547 187 AIVIINPC-NPCG--NVLTYQHLQKIAET 212 (311)
Q Consensus 187 ~i~i~~p~-nptG--~~~~~~~l~~l~~l 212 (311)
-+++.|.. .+.+ .-++.++++++.++
T Consensus 81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 81 DILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 45666652 2222 24678888877654
No 241
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=73.97 E-value=28 Score=26.76 Aligned_cols=100 Identities=7% Similarity=0.017 Sum_probs=62.3
Q ss_pred CEEEeCChHHHHHHHHHHH---hc--CCCCEEEecCCCCcchHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC
Q 021547 112 DIYITLGCMEAVEIILTVI---TR--LGAANILLPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l---~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
+++....+...+..++-.+ .. .+ ..|+...|-+..|.......|+. +..+..... .-.+...|++++.
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~-r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~---~daLwa~EqALrs 123 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDA-RWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRL 123 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSS-SEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSST---THHHHHHHHHHHT
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccC-ccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCCh---HHHHHHHHHHHhc
Confidence 4555544444343333333 32 44 56777777788889999999975 555543221 2245666888888
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
.....+++... .++..++++|---+++-+...
T Consensus 124 G~~~aVl~Wl~-----~l~~~~~RRLqlAAe~g~~~~ 155 (161)
T 1oft_A 124 GRSHTVVSWLE-----PLSRAARKQLSRAAQLGQAQS 155 (161)
T ss_dssp TCEEEEEECCS-----SCCHHHHHHHHHHHHHTTCEE
T ss_pred CCccEEEECCC-----cCChHHHHHHHHHHHhCCCeE
Confidence 77777777543 267778888887777666543
No 242
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=69.91 E-value=15 Score=34.12 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=64.0
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhc---C---CC----CEEEecCCCCc-------------------chHHHHHHcCc
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITR---L---GA----ANILLPRPGWP-------------------FYESFAKRNHI 157 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~---~---g~----d~Vl~~~p~~~-------------------~~~~~~~~~g~ 157 (311)
.++.+.|.++.++..++...+.+|.+ . |. ...+...|.|. .+.......++
T Consensus 97 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~Kl 176 (507)
T 2gjx_A 97 TINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKL 176 (507)
T ss_dssp EESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTC
T ss_pred EEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 34566788887777777666666632 1 20 11233456553 12345556677
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+...+.+.++.+|.+..+.+.++.... ...|.|..++.+++++|++.|+++||-||-
T Consensus 177 N~lh~HltDdq~wr~ei~~~P~Lt~~G--------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 177 NVFHWHLVDDPSFPYESFTFPELMRKG--------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCTHHHHHH--------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecccCeeeeccccchhhhcc--------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 777776655555555432222111000 012446679999999999999999999885
No 243
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=69.38 E-value=9.9 Score=35.26 Aligned_cols=107 Identities=13% Similarity=0.154 Sum_probs=62.9
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhc---CCC--CE-----EEecCCCCc-------------------chHHHHHHcCc
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITR---LGA--AN-----ILLPRPGWP-------------------FYESFAKRNHI 157 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~---~g~--d~-----Vl~~~p~~~-------------------~~~~~~~~~g~ 157 (311)
.++.+.|.++..+..++...+.+|.+ .+. .. .+...|.|. .+.......++
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~Kl 182 (507)
T 1now_A 103 LVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKF 182 (507)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTTC
T ss_pred EEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 44566788887777777666666642 110 11 234456653 12345556667
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+...+.+.++.+|.+..+.+.++-... ...| |..++.+++++|++.|++++|-||-
T Consensus 183 N~lh~HltDdq~wr~e~~~~P~Lt~~G--------a~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 183 NVLHWHIVDDQSFPYQSITFPELSNKG--------SYSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCHHHHHHH--------SSST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEeeccCccceeeccchhhhhccc--------CcCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 777666655555555433222211000 0012 6679999999999999999998884
No 244
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=67.17 E-value=34 Score=27.78 Aligned_cols=96 Identities=17% Similarity=0.082 Sum_probs=50.9
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------ 183 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 183 (311)
...+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADG-ATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 3456666655544456777788889 7777765544444455555566666655432 255555554431
Q ss_pred CccEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 021547 184 NTAAIVIINPCNPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 184 ~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 211 (311)
+...++-+....+.+. ..+.+++++..+
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3344433322222222 346666655443
No 245
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=66.85 E-value=30 Score=29.06 Aligned_cols=98 Identities=9% Similarity=0.015 Sum_probs=56.2
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 183 (311)
+..-+++|.|++..=..+...|.+.| .+|++..-.-......++..|.+...+..+- -|.+++++.++.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~G-a~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEG-ARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 33445556555544467888888999 6676655444445566666676666665432 255666554432
Q ss_pred CccEEEEeCCC-CCCcc--CCCHHHHHHHHHH
Q 021547 184 NTAAIVIINPC-NPCGN--VLTYQHLQKIAET 212 (311)
Q Consensus 184 ~~~~i~i~~p~-nptG~--~~~~~~l~~l~~l 212 (311)
...-+++.|.. ++.+. -++.++++++.++
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 22335555542 33222 3578888887765
No 246
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=62.91 E-value=45 Score=24.85 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=63.7
Q ss_pred EEEeCCh--HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547 113 IYITLGC--MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190 (311)
Q Consensus 113 v~~t~g~--~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i 190 (311)
++++.+. -..+..+...|.+-| -+++... +....++..|+.+..+.-..+++..-+...+.+.+.++..-+++
T Consensus 27 vliSv~d~dK~~l~~~a~~l~~lG-f~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVI 101 (143)
T 2yvq_A 27 ILIGIQQSFRPRFLGVAEQLHNEG-FKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVI 101 (143)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTTT-CEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEE
T ss_pred EEEEecccchHHHHHHHHHHHHCC-CEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEE
Confidence 8887666 555666777787788 6666554 33456678999888876433221000102355555555555555
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
..|.. ...+..+-..|.+.|-+|++.++..
T Consensus 102 nt~~~---~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 102 NLPNN---NTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ECCCC---CGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ECCCC---CCcCCccHHHHHHHHHHhCCCeEcC
Confidence 55532 1233677889999999999998754
No 247
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=62.49 E-value=18 Score=33.83 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=70.0
Q ss_pred CCCCCCCEEEeCChHHHHHHHHHHHhc--C-----------CCC-----EEEecCCCCc-------------------ch
Q 021547 106 YKLSADDIYITLGCMEAVEIILTVITR--L-----------GAA-----NILLPRPGWP-------------------FY 148 (311)
Q Consensus 106 ~~~~~~~v~~t~g~~~a~~~~~~~l~~--~-----------g~d-----~Vl~~~p~~~-------------------~~ 148 (311)
+.+ .+.|.|+.++..++...+.+|.+ + |.. ..+...|.|. .+
T Consensus 82 L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik~~ 160 (543)
T 3rcn_A 82 LEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVLRF 160 (543)
T ss_dssp EEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHHHH
T ss_pred EEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHHHH
Confidence 455 67898988777777666666532 1 200 1233456663 23
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-----CCccEEEE-e--CCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-----ENTAAIVI-I--NPCNPCGNVLTYQHLQKIAETARKLGILV 220 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i-~--~p~nptG~~~~~~~l~~l~~l~~~~~~~l 220 (311)
.......+++.-.+.+.++.+|.+..+.+.++-. ..+..--. . .-..|.|-.++.+++++|++.|++++|-|
T Consensus 161 ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~V 240 (543)
T 3rcn_A 161 IEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITV 240 (543)
T ss_dssp HHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEE
Confidence 4566777888888887766666665544333211 11100000 0 01245677899999999999999999988
Q ss_pred EE
Q 021547 221 IA 222 (311)
Q Consensus 221 i~ 222 (311)
|=
T Consensus 241 IP 242 (543)
T 3rcn_A 241 IP 242 (543)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 248
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=62.23 E-value=45 Score=27.68 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 183 (311)
....++||.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNG-AYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 34456666655544456777888889 7777655443344445555555555555432 255555554432
Q ss_pred -CccEEEEeCCC-CCCcc--CCCHHHHHHHH
Q 021547 184 -NTAAIVIINPC-NPCGN--VLTYQHLQKIA 210 (311)
Q Consensus 184 -~~~~i~i~~p~-nptG~--~~~~~~l~~l~ 210 (311)
+... ++.+.. .+.+. ..+.++++++.
T Consensus 100 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~ 129 (277)
T 4dqx_A 100 GRVDV-LVNNAGFGTTGNVVTIPEETWDRIM 129 (277)
T ss_dssp SCCCE-EEECCCCCCCBCTTTSCHHHHHHHH
T ss_pred CCCCE-EEECCCcCCCCCcccCCHHHHHHHH
Confidence 3333 444432 22222 35667766543
No 249
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=60.99 E-value=34 Score=32.11 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=60.3
Q ss_pred CEEEeCChHHHHHHHHHHHhc---C---CC------CEEEecCCCCc-------------------chHHHHHHcCcEEE
Q 021547 112 DIYITLGCMEAVEIILTVITR---L---GA------ANILLPRPGWP-------------------FYESFAKRNHIEVR 160 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~---~---g~------d~Vl~~~p~~~-------------------~~~~~~~~~g~~~~ 160 (311)
.|.++.+...++...+.+|.+ . +. ...+...|.|. .+.......+++.-
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 366777666677766666643 1 10 12344556663 12445556667777
Q ss_pred EeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 161 ~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.+.+.++.+|.+..+.+.++-... ....|..++.+++++|++.|+++||-||-
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~G---------a~~~~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFG---------ALSPQKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHH---------SSSSSSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeecCcCceeccccCcchhccC---------CcCCCCCcCHHHHHHHHHHHHHhCCceee
Confidence 776665555655433322211100 11235679999999999999999988873
No 250
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=60.04 E-value=44 Score=27.41 Aligned_cols=65 Identities=11% Similarity=-0.075 Sum_probs=35.5
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-......++..+.....+++. |.+.+++.+
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~ 90 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHG-HRVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFI 90 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHH
Confidence 34457777665544456777788888 555554333233344445556555555442 555555544
No 251
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=59.92 E-value=46 Score=27.08 Aligned_cols=68 Identities=15% Similarity=-0.015 Sum_probs=31.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEG-ATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHH
Confidence 33456666665544456777788889 6676654333333334444444455544322 25555555443
No 252
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=57.60 E-value=52 Score=27.12 Aligned_cols=65 Identities=11% Similarity=0.005 Sum_probs=36.8
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.|+...=..+...|.+.| .+|++..-.-..........+.++..+..+- .|.+.+++.+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~ 70 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAG-DTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVA 70 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHH
Confidence 345555554443356777788889 7777665544455555555555555554432 2555555544
No 253
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=56.80 E-value=42 Score=27.88 Aligned_cols=93 Identities=10% Similarity=0.033 Sum_probs=47.2
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------C
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------N 184 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 184 (311)
..++||.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+. -|.+.+++.++. +
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEG-CHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 345555554443356777788889 7777655443344445555555555554432 255555554431 3
Q ss_pred ccEEEEeCC-CCCCcc--CCCHHHHHHHH
Q 021547 185 TAAIVIINP-CNPCGN--VLTYQHLQKIA 210 (311)
Q Consensus 185 ~~~i~i~~p-~nptG~--~~~~~~l~~l~ 210 (311)
...+ +.+. ..+.+. ..+.+++++..
T Consensus 104 iD~l-vnnAg~~~~~~~~~~~~~~~~~~~ 131 (277)
T 3gvc_A 104 VDKL-VANAGVVHLASLIDTTVEDFDRVI 131 (277)
T ss_dssp CCEE-EECCCCCCCBCTTTCCHHHHHHHH
T ss_pred CCEE-EECCCCCCCCChhhCCHHHHHHHH
Confidence 3343 3433 222222 34666666543
No 254
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=56.64 E-value=61 Score=26.39 Aligned_cols=67 Identities=10% Similarity=-0.000 Sum_probs=37.5
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- .|.+.+++.+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 73 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREG-ATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAI 73 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHH
Confidence 33456776665544456777888889 7777655444344444455454455544432 2555555544
No 255
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=56.47 E-value=8.7 Score=34.89 Aligned_cols=29 Identities=14% Similarity=0.417 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++-|+++|+.||+|-++-+..
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 57899999999999999999999997753
No 256
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=56.46 E-value=47 Score=27.38 Aligned_cols=68 Identities=18% Similarity=0.062 Sum_probs=39.1
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....++||.|+...=..+...|.+.| ..|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 93 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQG-AIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAE 93 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHH
Confidence 34456666555544456777888889 7777655444444455555666666655432 25555555443
No 257
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=56.21 E-value=25 Score=29.40 Aligned_cols=69 Identities=20% Similarity=0.129 Sum_probs=40.4
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
....++||.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+. -|.+.+++.++.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRG-ATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 34456666665544467777788889 7777654443334445555555666665432 266667665543
No 258
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=54.63 E-value=58 Score=26.14 Aligned_cols=94 Identities=11% Similarity=0.011 Sum_probs=45.0
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------Cc
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NT 185 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~ 185 (311)
.+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++. +.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERG-HQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 46666665544456777777889 6777654443333333333333444444322 245555554331 33
Q ss_pred cEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 021547 186 AAIVIINPCNPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 186 ~~i~i~~p~nptG~--~~~~~~l~~l~~ 211 (311)
..++-+....+.+. ..+.+++++..+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 44443322222222 346666665543
No 259
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=54.44 E-value=81 Score=25.86 Aligned_cols=68 Identities=21% Similarity=0.059 Sum_probs=38.2
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 77 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAG-ARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALID 77 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHH
Confidence 34456666665544457777888889 6776655444445555555555555544332 25555555443
No 260
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=54.27 E-value=77 Score=25.50 Aligned_cols=63 Identities=16% Similarity=0.032 Sum_probs=32.9
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.++...=..+...|.+.| .+|++..-.-.......+..+.....+++ -|.+.+++.+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~ 68 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEG-ARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGF 68 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCEEEEecC-------CCHHHHHHHH
Confidence 346666555443356677777889 66665433222233333444544444433 2555555544
No 261
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=53.88 E-value=62 Score=26.35 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=51.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 183 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- .|.+.+++.+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGG-AEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 34456777665544467778888889 6777655444444445555555555555432 255555544321
Q ss_pred CccEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 021547 184 NTAAIVIINPC-NPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 184 ~~~~i~i~~p~-nptG~--~~~~~~l~~l~~ 211 (311)
...-+++.+.. .+.+. ..+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 12234444432 22221 346677766554
No 262
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=52.59 E-value=44 Score=27.57 Aligned_cols=54 Identities=7% Similarity=-0.009 Sum_probs=31.9
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 164 (311)
...++||.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~ 83 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADG-LGVVIADLAAEKGKALADELGNRAEFVST 83 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCTTEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCceEEEEc
Confidence 3456666665544466777788889 77776554433444555555555555554
No 263
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=51.96 E-value=97 Score=25.34 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=59.7
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEE-e--cCC-----------CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANIL-L--PRP-----------GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl-~--~~p-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
-+++-+||..+..++..+. +.| -.|. + ..+ ........++..|++...+++.... ....+++
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G-~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNR-FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTT-CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcC-CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHH
Confidence 4566788887777766554 556 4443 2 111 1123456888899998888764221 1235666
Q ss_pred HhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547 178 EALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221 (311)
Q Consensus 178 ~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li 221 (311)
.++++. +..+++ +|.+.+..++..+-+.|.+.|+..+
T Consensus 83 ~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 83 KRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 666654 444544 6777777789999999999988754
No 264
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=50.97 E-value=84 Score=25.41 Aligned_cols=67 Identities=13% Similarity=-0.083 Sum_probs=37.8
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++..+..+. -|.+.+++.+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 74 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGG-AKVVIVDRDKAGAERVAGEIGDAALAVAADI-----SKEADVDAAV 74 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TSHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHH
Confidence 34456666665544456777777889 6777665444444455555555555555432 2455555443
No 265
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=50.74 E-value=97 Score=24.97 Aligned_cols=68 Identities=15% Similarity=-0.112 Sum_probs=35.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++..+..+. .|.+.+++.+.
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQG-ASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 33456666555443356777787888 6666543333333444444454555554432 25555555443
No 266
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=50.60 E-value=79 Score=25.53 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=47.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 183 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.+...+..+- .|.+.+++.++.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERG-AKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 33456666655544456777788889 7777654433333344444443444444322 255666554432
Q ss_pred -CccEEEEeCCC-CCCc--cCCCHHHHHHHH
Q 021547 184 -NTAAIVIINPC-NPCG--NVLTYQHLQKIA 210 (311)
Q Consensus 184 -~~~~i~i~~p~-nptG--~~~~~~~l~~l~ 210 (311)
+... ++.+.. .+.+ ...+.+++++..
T Consensus 82 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~ 111 (248)
T 3op4_A 82 GGVDI-LVNNAGITRDNLLMRMKEEEWSDIM 111 (248)
T ss_dssp CCCSE-EEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHH
Confidence 3334 344332 2222 234666666543
No 267
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.24 E-value=56 Score=26.94 Aligned_cols=96 Identities=15% Similarity=0.026 Sum_probs=48.0
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC------------Cc---chHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPG------------WP---FYESFAKRNHIEVRHFDLLPERGWEVDL 174 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~------------~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 174 (311)
...++||.|+...=..+...|.+.| .+|++..-. -. .....++..+.++..+..+- -|.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCH
Confidence 3456666665544467777888889 666654322 00 11123344565666665432 255
Q ss_pred HHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547 175 EAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 175 ~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~ 211 (311)
+.+++.+.. +...++-+....+.+...+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 555554431 3344333322233333466677766544
No 268
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=49.82 E-value=1.1e+02 Score=25.24 Aligned_cols=99 Identities=10% Similarity=-0.032 Sum_probs=49.7
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe-cCCCC-cchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILL-PRPGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-- 183 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~-~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 183 (311)
++..-+++|.|++.-=..+...|.+.| -.|++ ....- ..........+.+...+..+- -|.+++++.+.+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~G-a~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEER-AIPVVFARHAPDGAFLDALAQRQPRATYLPVEL-----QDDAQCRDAVAQTI 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCCHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCcccHHHHHHHHhcCCCEEEEEeec-----CCHHHHHHHHHHHH
Confidence 344445555554433366777888889 55554 33222 122333444555556555432 245555544332
Q ss_pred ---CccEEEEeCCC--CCCccCCCHHHHHHHHHH
Q 021547 184 ---NTAAIVIINPC--NPCGNVLTYQHLQKIAET 212 (311)
Q Consensus 184 ---~~~~i~i~~p~--nptG~~~~~~~l~~l~~l 212 (311)
...-+++.|.. .+...-.+.+++++..++
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 22334555542 233445677777665543
No 269
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=49.71 E-value=88 Score=25.88 Aligned_cols=153 Identities=15% Similarity=0.196 Sum_probs=86.7
Q ss_pred CCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh--
Q 021547 44 PRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC-- 119 (311)
Q Consensus 44 ~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~-- 119 (311)
+-++|-++.. ||.. -=|.++++..++++++. ....+-+.+.+. +. . --+++-+=.
T Consensus 41 GaD~iElGiPfSDP~a-----DGpvIq~a~~rAL~~g~--------~~~~~~~~~~~~-r~------~-~Pivlm~Y~N~ 99 (252)
T 3tha_A 41 PIDILELGVAYSDPIA-----DGEIIADAAKIALDQGV--------DIHSVFELLARI-KT------K-KALVFMVYYNL 99 (252)
T ss_dssp SCSEEEEECCCSCCCS-----CCCHHHHHHHHHHHTTC--------CHHHHHHHHHHC-CC------S-SEEEEECCHHH
T ss_pred CCCEEEECCCCCCCCC-----CcHHHHHHHHHHHHCCC--------CHHHHHHHHHHH-hc------C-CCEEEEeccCH
Confidence 6788877766 4432 23567777777776432 122222222221 11 0 123332222
Q ss_pred --HHHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCC
Q 021547 120 --MEAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC 194 (311)
Q Consensus 120 --~~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~ 194 (311)
.-+++..+..+.+.|.|.+++++--+. .+...++..|+..+.+=. +. .+.+.+++..+....-+++.+-.
T Consensus 100 i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P~----t~~eRi~~ia~~a~gFiY~Vs~~ 174 (252)
T 3tha_A 100 IFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-VT----TPKERVKKLVKHAKGFIYLLASI 174 (252)
T ss_dssp HHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-TT----SCHHHHHHHHTTCCSCEEEECCS
T ss_pred HHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CcHHHHHHHHHhCCCeEEEEecC
Confidence 223555666667788899999876543 466788899998766432 21 24677777666554555555545
Q ss_pred CCCccCCC-HHHHHHHHHHHHHh-CCEEEE
Q 021547 195 NPCGNVLT-YQHLQKIAETARKL-GILVIA 222 (311)
Q Consensus 195 nptG~~~~-~~~l~~l~~l~~~~-~~~li~ 222 (311)
.-||..-. .+++.++++.++++ ++.+++
T Consensus 175 GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 175 GITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 56887533 23467777777765 555555
No 270
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=49.65 E-value=1e+02 Score=24.92 Aligned_cols=96 Identities=11% Similarity=-0.039 Sum_probs=48.8
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 183 (311)
....+++|.|++..=..+...|.+.| .+|++..-.-.... ..++..+.++..+..+- -|.+.+++.+..
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEG-FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA-----RNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC-----CCHHHHHHHHHHHH
Confidence 34456666665544467777788889 66766543333322 33344466666665532 255555554331
Q ss_pred --CccEEEEeCCC-CCCcc--CCCHHHHHHHH
Q 021547 184 --NTAAIVIINPC-NPCGN--VLTYQHLQKIA 210 (311)
Q Consensus 184 --~~~~i~i~~p~-nptG~--~~~~~~l~~l~ 210 (311)
...-+++.+.. ...+. ..+.+++++..
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 111 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVW 111 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 12234444432 22222 35666665543
No 271
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.82 E-value=67 Score=29.09 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=55.6
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch-HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY-ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT 185 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 185 (311)
++....|++..||..|...+ ..|.+.| ..|.+.+|....- .......+++++.-. ...+++. +.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~-~~L~~~g-a~V~vi~~~~~~~~~~l~~~~~i~~~~~~--------~~~~~l~-----~~ 73 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKA-RLLLEAG-ARLTVNALTFIPQFTVWANEGMLTLVEGP--------FDETLLD-----SC 73 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHH-HHHHHTT-BEEEEEESSCCHHHHHHHTTTSCEEEESS--------CCGGGGT-----TC
T ss_pred ECCCCEEEEECCCHHHHHHH-HHHHhCc-CEEEEEcCCCCHHHHHHHhcCCEEEEECC--------CCccccC-----Cc
Confidence 34556788888887776665 5556788 6777777765432 222222344433211 1222222 22
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEeccc
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV-IADEVY 226 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l-i~D~ay 226 (311)
. +++..|++|. .-..+.+.|+++++++ ++|+.-
T Consensus 74 ~-lVi~at~~~~-------~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 74 W-LAIAATDDDT-------VNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp S-EEEECCSCHH-------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred c-EEEEcCCCHH-------HHHHHHHHHHHcCCEEEECCCcc
Confidence 2 4555666542 2577889999999987 566654
No 272
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=48.52 E-value=36 Score=27.27 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=28.1
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 182 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.-.+.+++..-..|+.|.... +.++.+++++||+.++.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 335556555455588999998 77778888899998875
No 273
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=48.04 E-value=1.1e+02 Score=25.06 Aligned_cols=68 Identities=7% Similarity=-0.067 Sum_probs=37.4
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+- -|.+.+++.++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 95 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAG-ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFA 95 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHH
Confidence 44456666555544467777888889 777776544333222 2333455666655432 25555555443
No 274
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=47.96 E-value=50 Score=27.72 Aligned_cols=22 Identities=0% Similarity=0.146 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHhCCEEEEec
Q 021547 203 YQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ 224 (311)
.+.++++++.|.++|+.+|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3567777777777777777773
No 275
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=47.93 E-value=32 Score=34.04 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=67.7
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHhc---CCCC-----EEEecCCCCc-------------------chHHHHHHcCcEE
Q 021547 107 KLSADDIYITLGCMEAVEIILTVITR---LGAA-----NILLPRPGWP-------------------FYESFAKRNHIEV 159 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~~---~g~d-----~Vl~~~p~~~-------------------~~~~~~~~~g~~~ 159 (311)
.++.+.|.|+.+...++...+.+|.+ .+.. ..+...|.|. .+...+...+++.
T Consensus 265 ~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~ 344 (858)
T 1c7s_A 265 KIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNK 344 (858)
T ss_dssp EECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 44567788887777777666666642 2202 1233456664 2345666677887
Q ss_pred EEeeccCCCCcccCHHHHHhhcCCCcc------EEEEeCC---C--CCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 160 RHFDLLPERGWEVDLEAVEALADENTA------AIVIINP---C--NPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~~~------~i~i~~p---~--nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
..+.+.+..+|.+..+.+.++-..... .--...| + .+.|..++.+++++|++.|++++|-||-
T Consensus 345 lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 345 FHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 777776666666654433222110000 0000001 1 1456789999999999999999998873
No 276
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=47.87 E-value=1.2e+02 Score=25.04 Aligned_cols=98 Identities=17% Similarity=0.096 Sum_probs=53.1
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch---HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY---ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-- 182 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-- 182 (311)
++...+++|.|++.-=..+...|.+.| .+|++..-.-... ...++..|.++..+..+- -|.+++++.++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDV-----TDELAIEAAFSKL 80 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-----CCHHHHHHHHHHH
Confidence 344445555555544467778888999 7777765433222 233445576777665532 25555555433
Q ss_pred --C-CccEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 021547 183 --E-NTAAIVIINPC-NPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 183 --~-~~~~i~i~~p~-nptG~--~~~~~~l~~l~~ 211 (311)
. ...-+++.|.. ++.+. -++.++++++.+
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 22335555542 22222 357777777654
No 277
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=47.86 E-value=20 Score=29.86 Aligned_cols=50 Identities=26% Similarity=0.391 Sum_probs=35.0
Q ss_pred cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 021547 170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225 (311)
Q Consensus 170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~a 225 (311)
|.+|.-.+.++...+..++++... .+++++++++.+.|++.|+-+++|-.
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 556655665555556666655443 35678899999999999999998844
No 278
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=47.74 E-value=1.2e+02 Score=25.22 Aligned_cols=96 Identities=10% Similarity=0.165 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 122 AVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 122 a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
++...+..+.+.|.|.+++++-.+. .+...++..|+..+.+-. +. .+.+.++...+.....+++.+-..-||
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~lia-P~----t~~eri~~i~~~~~gfvY~vS~~GvTG 185 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAP-PN----ADADTLKMVSEQGEGYTYLLSRAGVTG 185 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEEC-TT----CCHHHHHHHHHHCCSCEEESCCCCCC-
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 3455666677778889888876554 456778888888765421 21 245666666554444555555555577
Q ss_pred cCC-CHHHHHHHHHHHHHh-CCEEEE
Q 021547 199 NVL-TYQHLQKIAETARKL-GILVIA 222 (311)
Q Consensus 199 ~~~-~~~~l~~l~~l~~~~-~~~li~ 222 (311)
..- -.+++.++++.++++ ++.+++
T Consensus 186 ~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 186 TESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp -------CHHHHHHHHHTTTCCCEEE
T ss_pred CccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 653 123466666666654 555555
No 279
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=46.92 E-value=90 Score=25.71 Aligned_cols=97 Identities=7% Similarity=-0.081 Sum_probs=53.3
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch---HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY---ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--- 183 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 183 (311)
..-+++|.|++..=..+...|.+.| .+|++..-.-... ...++..|.++..+..+- -|.+++++.++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~G-a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-----t~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALND-SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-----SKKKDVEEFVRRTFE 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3445555555443366777788899 6666654333222 234455677777666542 255666655432
Q ss_pred --CccEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 021547 184 --NTAAIVIINPC--NPCG--NVLTYQHLQKIAET 212 (311)
Q Consensus 184 --~~~~i~i~~p~--nptG--~~~~~~~l~~l~~l 212 (311)
...-+++.|.. .+.+ .-++.++++++.++
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 23335666653 2333 24688888776553
No 280
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=46.75 E-value=15 Score=33.29 Aligned_cols=29 Identities=14% Similarity=0.321 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 37899999999999999999999997654
No 281
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=46.53 E-value=1e+02 Score=26.07 Aligned_cols=103 Identities=15% Similarity=0.104 Sum_probs=57.1
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC--CcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-C
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPG--WPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-N 184 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~--~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~ 184 (311)
..|++|.++...=..++..|.+.|.+.+++.... ...-. ......+.+++..++. |.+.+.++++. +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHHhhCC
Confidence 4687776643333455566666773444444433 11111 1233467777666542 67888887763 4
Q ss_pred ccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhC-CEEEEecccc
Q 021547 185 TAAIVIINP-CNPCGNVLTYQHLQKIAETARKLG-ILVIADEVYG 227 (311)
Q Consensus 185 ~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~-~~li~D~ay~ 227 (311)
...|+.+.. .|..| -..+++.|++.+ +..++=..|+
T Consensus 84 ~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 84 IDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp CCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred CCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 555554443 33332 468889999888 6555534444
No 282
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=45.97 E-value=27 Score=29.56 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=47.1
Q ss_pred CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
.|..+..+.+.....+..+-..+ ..-.+.++++++.+.+.+++.+. | ++.++.+++.+.|+++++.++-.
T Consensus 52 vy~sl~el~~~~~~D~viI~tP~----~~~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~liGP 121 (288)
T 2nu8_A 52 VFNTVREAVAATGATASVIYVPA----PFCKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEAGVRMIGP 121 (288)
T ss_dssp EESSHHHHHHHHCCCEEEECCCG----GGHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECS
T ss_pred ccCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEec
Confidence 34445555553234433332211 23566677777777787655433 3 35677889999999999998878
Q ss_pred ccccCC
Q 021547 224 EVYGHL 229 (311)
Q Consensus 224 ~ay~~~ 229 (311)
++.+.+
T Consensus 122 Nc~Gi~ 127 (288)
T 2nu8_A 122 NTPGVI 127 (288)
T ss_dssp SCCEEE
T ss_pred CCccee
Confidence 876543
No 283
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=45.63 E-value=1.1e+02 Score=24.59 Aligned_cols=66 Identities=15% Similarity=-0.067 Sum_probs=33.6
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
..+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 71 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVA 71 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHH
Confidence 446666555444456777778889 6666543322222333333344444444322 24555555443
No 284
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=44.84 E-value=1.1e+02 Score=23.85 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=50.5
Q ss_pred EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC-HHHHHhhcCCCccEEEEe
Q 021547 113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD-LEAVEALADENTAAIVII 191 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~i~i~ 191 (311)
|++|.++...=..++..|.+.| .+|.+..-.-..... ..+.+++..++ .| .+.+.++++ +...++.+
T Consensus 3 ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~---~~~~~~~~~D~-------~d~~~~~~~~~~-~~d~vi~~ 70 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQ---YNNVKAVHFDV-------DWTPEEMAKQLH-GMDAIINV 70 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCC---CTTEEEEECCT-------TSCHHHHHTTTT-TCSEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhh---cCCceEEEecc-------cCCHHHHHHHHc-CCCEEEEC
Confidence 6666554433356677777888 666654322111111 13445444433 25 778888776 45555544
Q ss_pred CC-CCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 192 NP-CNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 192 ~p-~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
.. ..+.-...+..-...+++.|++.++
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhCC
Confidence 43 2222222233446778888888774
No 285
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=44.63 E-value=32 Score=29.30 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=38.5
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
-.+.++++++.+.+.+++.+. | ++.++.+++.+.|+++++.++-.++.+-+.
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 135 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQKGATIIGPNCPGAIT 135 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCCeeEc
Confidence 566777777778886665443 3 255778999999999999988888776543
No 286
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=44.32 E-value=22 Score=30.22 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=37.9
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
-.+.++++++.+.+.+++.+. |. +.++.+++.+.|+++++.++-.++.+-+.
T Consensus 83 ~~~~v~ea~~~Gi~~vVi~t~----G~--~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 134 (294)
T 2yv1_A 83 AKDAVFEAIDAGIELIVVITE----HI--PVHDTMEFVNYAEDVGVKIIGPNTPGIAS 134 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----CC--CHHHHHHHHHHHHHHTCEEECSSCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEcCCCceeec
Confidence 456667777778886665432 32 55778999999999999988888776543
No 287
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=44.16 E-value=48 Score=27.97 Aligned_cols=14 Identities=14% Similarity=0.031 Sum_probs=9.9
Q ss_pred HHcCcEEEEeeccC
Q 021547 153 KRNHIEVRHFDLLP 166 (311)
Q Consensus 153 ~~~g~~~~~~~~~~ 166 (311)
+..|++.+.+++..
T Consensus 54 ~~~G~N~VRip~~~ 67 (303)
T 7a3h_A 54 DDWGINVFRAAMYT 67 (303)
T ss_dssp HHTCCCEEEEEEES
T ss_pred HhcCCCEEEEEEEe
Confidence 36788888887754
No 288
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=44.10 E-value=1.2e+02 Score=24.31 Aligned_cols=65 Identities=8% Similarity=-0.087 Sum_probs=33.7
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- .|.+.+++.+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEG-AKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVM 71 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHH
Confidence 345665554443356777777889 7777654433333333333344455444322 2555555544
No 289
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=43.45 E-value=50 Score=28.34 Aligned_cols=13 Identities=15% Similarity=0.005 Sum_probs=8.0
Q ss_pred HHcCcEEEEeecc
Q 021547 153 KRNHIEVRHFDLL 165 (311)
Q Consensus 153 ~~~g~~~~~~~~~ 165 (311)
+..|++.+.+++.
T Consensus 79 ~~~G~N~VRi~~~ 91 (327)
T 3pzt_A 79 DDWGITVFRAAMY 91 (327)
T ss_dssp HHTCCSEEEEEEE
T ss_pred HhcCCCEEEEEeE
Confidence 4566666666654
No 290
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=43.44 E-value=79 Score=25.34 Aligned_cols=68 Identities=12% Similarity=0.054 Sum_probs=36.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.......+....++..+..+. -+.+.+++.+.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLIS 80 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHH
Confidence 44556666655544456677788889 7777655444444444444433444333221 25566666554
No 291
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=43.08 E-value=29 Score=29.37 Aligned_cols=52 Identities=21% Similarity=0.318 Sum_probs=38.2
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
-.+.++++++.+.+.+++.+. | ++.++.+++.+.++++++.++-.++.+.+.
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCeEEc
Confidence 456667777778886665443 3 355678999999999999999898876544
No 292
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=43.05 E-value=19 Score=32.82 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
.+++++|++.|+++|+.||.|-++-+.
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 789999999999999999999998765
No 293
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=42.68 E-value=19 Score=32.79 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.|+++|+-||.|-++-+.
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 3789999999999999999999998765
No 294
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=42.41 E-value=1.3e+02 Score=23.99 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=35.3
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...+++|.|+...=..+...|.+.| .+|++....-.... ..++..+.++..+..+. .|.+.+++.+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFF 73 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 3456666655444456777777889 77766544332222 23344455666555432 2555555543
No 295
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=42.21 E-value=86 Score=24.83 Aligned_cols=92 Identities=13% Similarity=-0.011 Sum_probs=47.3
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEE
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAI 188 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i 188 (311)
.+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+. -+.+.+++.+.. ....
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~- 75 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEG-KATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPST- 75 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSE-
T ss_pred EEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCE-
Confidence 46777666554466777788888 6666654443344445554444444444322 255666655432 2233
Q ss_pred EEeCCC-CCCcc--CCCHHHHHHHH
Q 021547 189 VIINPC-NPCGN--VLTYQHLQKIA 210 (311)
Q Consensus 189 ~i~~p~-nptG~--~~~~~~l~~l~ 210 (311)
++.+.. .+.+. ..+.+++++..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~ 100 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLI 100 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHH
Confidence 344332 22222 34666665544
No 296
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=41.96 E-value=23 Score=31.83 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.|+++|+.||.|-++-+..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 7899999999999999999999987644
No 297
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=41.92 E-value=1.4e+02 Score=24.31 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=34.7
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.++...=..+...|.+.| .+|++..-.-....... +..+.++..+..+. -|.+.+++++.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 91 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLE 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHH
Confidence 33456666555444456777788889 67766533322222222 22355555554432 25555555443
No 298
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=41.83 E-value=24 Score=31.38 Aligned_cols=29 Identities=24% Similarity=0.302 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-...
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 37899999999999999999999987654
No 299
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=41.69 E-value=20 Score=33.03 Aligned_cols=28 Identities=29% Similarity=0.374 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.||++|+.||.|-++-+.
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 3789999999999999999999998765
No 300
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=41.68 E-value=1.4e+02 Score=24.14 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=48.2
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE- 183 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~- 183 (311)
.....+++|.|+...=..+...|.+.| .+|++..-.-.... ..++..+.++..+..+- .|.+.+++.++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAA 83 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 344456666555544456777788889 66766543332222 23334455666655432 255555554431
Q ss_pred -----CccEEEEeCCC--CCCccCCCHHHHHHHH
Q 021547 184 -----NTAAIVIINPC--NPCGNVLTYQHLQKIA 210 (311)
Q Consensus 184 -----~~~~i~i~~p~--nptG~~~~~~~l~~l~ 210 (311)
+... ++.+.. .+.....+.+++++..
T Consensus 84 ~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~ 116 (256)
T 3gaf_A 84 LDQFGKITV-LVNNAGGGGPKPFDMPMSDFEWAF 116 (256)
T ss_dssp HHHHSCCCE-EEECCCCCCCCCTTCCHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCCCCCHHHHHHHH
Confidence 3334 444432 2222245667666543
No 301
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=41.49 E-value=1.1e+02 Score=25.10 Aligned_cols=65 Identities=17% Similarity=0.103 Sum_probs=34.9
Q ss_pred CEEEeCChHHHH-HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 112 DIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 112 ~v~~t~g~~~a~-~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+++.+|++.++ ..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 94 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAG-YGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFT 94 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHH
Confidence 344444444444 56777788889 6777654443344445555554555444332 25555555443
No 302
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=41.49 E-value=21 Score=32.61 Aligned_cols=27 Identities=30% Similarity=0.352 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
.+++++|++.|+++|+.||.|-++-..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 689999999999999999999998764
No 303
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=41.42 E-value=1.5e+02 Score=24.61 Aligned_cols=68 Identities=19% Similarity=0.126 Sum_probs=36.2
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....++||.+++..=..+...|.+.| .+|++..-.-..... .++..+.++..+..+. -|.+.+++.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHH
Confidence 33456666665544456777788889 677665433333222 2333455555555432 25555555443
No 304
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=41.37 E-value=21 Score=33.00 Aligned_cols=28 Identities=21% Similarity=0.351 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.|+++|+.||.|-++-..
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 4688999999999999999999998754
No 305
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=41.20 E-value=1.6e+02 Score=24.72 Aligned_cols=82 Identities=10% Similarity=0.141 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc----------hHHHHHHcCc
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF----------YESFAKRNHI 157 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----------~~~~~~~~g~ 157 (311)
+-|..+.+...+. +. . |++..|+ .+++. ..+...+.|.|.|++..|.|.. |...++..++
T Consensus 52 eEr~~v~~~~~~~----~~-g-viaGvg~~~t~~ai~-la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~l 124 (293)
T 1w3i_A 52 EEKLENLKAVYDV----TN-K-IIFQVGGLNLDDAIR-LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPH 124 (293)
T ss_dssp HHHHHHHHHHHTT----CS-C-EEEECCCSCHHHHHH-HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHH----cC-C-EEEecCCCCHHHHHH-HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCC
Confidence 3455566655431 12 2 7777665 33333 3344456788999999998864 1234455556
Q ss_pred EEEEeeccCCCCcccCHHHHHh
Q 021547 158 EVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
.+..+......+..++.+.+.+
T Consensus 125 PiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 125 PVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp CEEEEECHHHHSCCCCHHHHHH
T ss_pred CEEEEECchhhCcCCCHHHHHh
Confidence 6655554222334566666665
No 306
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=41.17 E-value=1.1e+02 Score=25.03 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=20.4
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....++||.|++..=..+...|.+.| .+|++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G-~~V~~~ 41 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEG-ADIIAV 41 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEE
Confidence 33456666665544467777888889 666654
No 307
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=41.14 E-value=55 Score=23.93 Aligned_cols=49 Identities=18% Similarity=0.299 Sum_probs=28.5
Q ss_pred ccCH-HHHHhhcCCCccEEEEeCCCCCCccC-CCHHHH---HHHHHHHHHhCCEE
Q 021547 171 EVDL-EAVEALADENTAAIVIINPCNPCGNV-LTYQHL---QKIAETARKLGILV 220 (311)
Q Consensus 171 ~~d~-~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l---~~l~~l~~~~~~~l 220 (311)
.+++ +-++.++..+..++++++ |.|.|.. .|.+++ ++|.+.++--|+.+
T Consensus 53 ~v~pRei~~~Al~~~A~~vIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~ll~I~l 106 (126)
T 2qlc_A 53 LIHPREIFKAAIRESAHSIILVH-NHPSGDVQPSNADKQVTSILKKAGDLLQIEL 106 (126)
T ss_dssp GCCHHHHHHHHHHTTCSEEEEEE-ECSSSCCSCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred eecHHHHHHHHHHcCCcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHHCCCeE
Confidence 3444 444667877888887765 4455553 345554 45666666556543
No 308
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=41.14 E-value=1.4e+02 Score=23.97 Aligned_cols=66 Identities=20% Similarity=0.013 Sum_probs=34.7
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCC-cchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...+++|.++...=..+...|.+.| .+|++..-.- ......++..+.++..+..+- -|.+.+++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEG-ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFG 73 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHH
Confidence 3446666555544456777788889 6666543222 222223344555555554432 2455555543
No 309
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=40.59 E-value=23 Score=32.40 Aligned_cols=29 Identities=34% Similarity=0.473 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 37899999999999999999999987643
No 310
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=40.55 E-value=25 Score=31.67 Aligned_cols=29 Identities=41% Similarity=0.528 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+-||.|-++-+..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 47899999999999999999999987654
No 311
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=40.45 E-value=1.4e+02 Score=24.01 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=20.2
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
...+++|.++...=..+...|.+.| .+|++..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 43 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAG-ATVAIAD 43 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 3456666555444456777788889 6776543
No 312
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=40.42 E-value=1.4e+02 Score=24.98 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=39.0
Q ss_pred EEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc----------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 113 IYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF----------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 113 v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
|++..|+ .+++..+ +...+.|+|.|++..|.|.. |...++..++.+..+......+..++.+.+.+
T Consensus 67 vi~Gvg~~~t~~ai~la-~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 67 VIVQVASLNADEAIALA-KYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp EEEECCCSSHHHHHHHH-HHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred EEEeeCCCCHHHHHHHH-HHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 7776665 3344333 33346788999999999864 12345555666665554322344566666666
No 313
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=40.32 E-value=29 Score=32.10 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAF 231 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~ 231 (311)
+.+++++|++.||++|+.||.|-++-+...
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 378999999999999999999999987543
No 314
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.21 E-value=1.6e+02 Score=24.48 Aligned_cols=96 Identities=22% Similarity=0.139 Sum_probs=46.5
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH---cC-cEEEEeeccCCCCcccCHHHHHhhcCC-
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR---NH-IEVRHFDLLPERGWEVDLEAVEALADE- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~---~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~- 183 (311)
....++||.|+...=..+...|.+.| .+|++..-.-.......+. .+ .++..+..+- -|.+.+++.+..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 113 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAG-ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTV 113 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHH
Confidence 34455666555443456777888889 6776654443333333332 22 2444444322 255555554331
Q ss_pred -----CccEEEEeCC-CCCCcc--CCCHHHHHHHHH
Q 021547 184 -----NTAAIVIINP-CNPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 184 -----~~~~i~i~~p-~nptG~--~~~~~~l~~l~~ 211 (311)
+... ++.+. ..+.+. ..+.+++++..+
T Consensus 114 ~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 114 VDAFGALDV-VCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHHHSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3333 44443 222222 346666665543
No 315
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.18 E-value=1.5e+02 Score=24.21 Aligned_cols=66 Identities=17% Similarity=0.051 Sum_probs=34.9
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...++||.|+...=..+...|.+.| .+|++..-.-....... ...+.++..+..+- -|.+.+++.+
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 96 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHG-CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAV 96 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 3446666655544467777888889 67766543333222222 22355566555432 2555555544
No 316
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.82 E-value=1.6e+02 Score=24.22 Aligned_cols=69 Identities=12% Similarity=-0.015 Sum_probs=36.7
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.....++||.|+...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+- -|.+.+++.++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~ 101 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAG-AQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLD 101 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHH
Confidence 344556666665544456777788889 666665433333222 3333454555554432 25566655443
No 317
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=39.81 E-value=25 Score=31.94 Aligned_cols=28 Identities=18% Similarity=0.412 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.|+++|+-||.|-++-+..
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 7899999999999999999999988654
No 318
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=39.73 E-value=2e+02 Score=25.54 Aligned_cols=89 Identities=10% Similarity=0.013 Sum_probs=41.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-CCCCEEEec-CC-CCc-------------chHH
Q 021547 87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-LGAANILLP-RP-GWP-------------FYES 150 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-~g~d~Vl~~-~p-~~~-------------~~~~ 150 (311)
.|..+-.+...+|.+..-.+.-....+++|.+++.-=.++...|.. .| ..|++. .. .-. ....
T Consensus 24 ~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~G-A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~ 102 (405)
T 3zu3_A 24 TGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCG-ADTLGVFFERPGEEGKPGTSGWYNSAAFHK 102 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCBTTBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcC-CEEEEEeCCchhhhhhcccccchhHHHHHH
Confidence 3444333333345554322222334455555544333556667777 88 666543 21 110 0223
Q ss_pred HHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 151 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
.++..|.+...+..+- .|.+.+++++
T Consensus 103 ~~~~~G~~a~~i~~Dv-----td~~~v~~~v 128 (405)
T 3zu3_A 103 FAAQKGLYAKSINGDA-----FSDEIKQLTI 128 (405)
T ss_dssp HHHHTTCCEEEEESCT-----TSHHHHHHHH
T ss_pred HHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 4456677766665432 2555555543
No 319
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=39.55 E-value=20 Score=32.69 Aligned_cols=29 Identities=14% Similarity=0.344 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 37899999999999999999999987654
No 320
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=39.43 E-value=27 Score=31.73 Aligned_cols=28 Identities=32% Similarity=0.515 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.|+++|+.||.|-++-+..
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 6899999999999999999999987643
No 321
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=39.30 E-value=1.2e+02 Score=25.36 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=41.0
Q ss_pred CcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
|..+..++. ...++.+-..+ ....+.+.++++.+ +-+++.-|- ..+.++.++|.+.++++|+.+.+..
T Consensus 57 ~~~~~~ll~--~~D~V~i~tp~----~~h~~~~~~al~~g-k~vl~EKP~-----~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 57 FDSIESLAK--KCDCIFLHSST----ETHYEIIKILLNLG-VHVYVDKPL-----ASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp CSCHHHHHT--TCSEEEECCCG----GGHHHHHHHHHHTT-CEEEECSSS-----SSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCHHHHHh--cCCEEEEeCCc----HhHHHHHHHHHHCC-CcEEEcCCC-----CCCHHHHHHHHHHHHHcCCEEEEee
Confidence 444554444 44444443211 12344444555443 234433332 2467889999999999999988877
Q ss_pred cccC
Q 021547 225 VYGH 228 (311)
Q Consensus 225 ay~~ 228 (311)
.+..
T Consensus 125 ~~r~ 128 (308)
T 3uuw_A 125 NRRF 128 (308)
T ss_dssp GGGG
T ss_pred cccc
Confidence 7664
No 322
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=39.28 E-value=1.5e+02 Score=24.89 Aligned_cols=66 Identities=11% Similarity=-0.083 Sum_probs=35.2
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC----------Cc---chHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPG----------WP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAV 177 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~----------~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 177 (311)
..++||.|++..=..+...|.+.| .+|++..-. -. .....+...+.++..+..+. -|.+.+
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v 101 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQA 101 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHH
Confidence 345555554433356777788889 677665322 11 12233444566666665432 255665
Q ss_pred HhhcC
Q 021547 178 EALAD 182 (311)
Q Consensus 178 ~~~l~ 182 (311)
++.++
T Consensus 102 ~~~~~ 106 (322)
T 3qlj_A 102 AGLIQ 106 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 323
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=38.94 E-value=1.4e+02 Score=25.07 Aligned_cols=34 Identities=12% Similarity=0.276 Sum_probs=22.0
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
-|++..|+ .+++..+ +...+.|.|.|++..|.|.
T Consensus 72 pvi~Gvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 72 PVIAGTGSNNTAASIAMS-KWAESIGVDGLLVITPYYN 108 (291)
T ss_dssp CEEEECCCSSHHHHHHHH-HHHHHTTCSEEEEECCCSS
T ss_pred cEEEeCCcccHHHHHHHH-HHHHhcCCCEEEEcCCCCC
Confidence 47776655 3344333 3334678899999999885
No 324
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=38.84 E-value=1.5e+02 Score=23.90 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=19.8
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
...+++|.++...=..+...|.+.| .+|++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 38 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEG-AKVVFGD 38 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3456666555443356777777889 6776543
No 325
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=38.45 E-value=1.7e+02 Score=24.39 Aligned_cols=83 Identities=12% Similarity=0.232 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc----------hHHHHHHcCc
Q 021547 91 LARRAVAEYLNRDLPYKLSADDIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF----------YESFAKRNHI 157 (311)
Q Consensus 91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----------~~~~~~~~g~ 157 (311)
+-|..+.+...+. ... |++..|+ .+++.. .+...+.|+|.|++..|.|.. |...++..++
T Consensus 52 eEr~~v~~~~~~~-----~~g-ViaGvg~~~t~~ai~l-a~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~l 124 (288)
T 2nuw_A 52 DEKRQNLNALYDV-----THK-LIFQVGSLNLNDVMEL-VKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSH 124 (288)
T ss_dssp HHHHHHHHHHTTT-----CSC-EEEECCCSCHHHHHHH-HHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHH-----hCC-eEEeeCCCCHHHHHHH-HHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCC
Confidence 3455566665431 122 8777665 334433 333446788999999999864 1234555566
Q ss_pred EEEEeeccCCCCcccCHHHHHhh
Q 021547 158 EVRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
.+..+......+..++.+.+.++
T Consensus 125 PiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 125 SLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp CEEEEECHHHHSCCCCHHHHTTT
T ss_pred CEEEEECchHhCcCCCHHHHhcc
Confidence 66655543223445666666665
No 326
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.45 E-value=1.2e+02 Score=24.81 Aligned_cols=96 Identities=11% Similarity=-0.039 Sum_probs=47.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC-CCcc---hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRP-GWPF---YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~- 183 (311)
....++||.|++..=..+...|.+.| .+|++..- .-.. ....++..+.++..+..+- -|.+.+++.+..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAG-AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 34456666555444456777788889 67665332 2221 2233344455666555432 255555554432
Q ss_pred -----CccEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 021547 184 -----NTAAIVIINPC-NPCG--NVLTYQHLQKIAE 211 (311)
Q Consensus 184 -----~~~~i~i~~p~-nptG--~~~~~~~l~~l~~ 211 (311)
+... ++.+.. .+.+ ...+.+++++..+
T Consensus 101 ~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 101 IERWGRLDV-LVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3333 444432 2222 2346666665433
No 327
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=38.39 E-value=1.1e+02 Score=25.10 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=20.7
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....++||.|++..=..+...|.+.| .+|++.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G-~~V~~~ 41 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEG-ADIIAV 41 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEE
Confidence 34456666665544467777888889 666654
No 328
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=38.39 E-value=48 Score=30.94 Aligned_cols=78 Identities=9% Similarity=-0.049 Sum_probs=47.5
Q ss_pred cCCCCEEEecCCCCcch-------HHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCC
Q 021547 132 RLGAANILLPRPGWPFY-------ESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLT 202 (311)
Q Consensus 132 ~~g~d~Vl~~~p~~~~~-------~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~ 202 (311)
+++ |.|++.....++. .......|++++...... .-..-.|.++|...++. +++-++..+.-.
T Consensus 337 ~~~-~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~------- 408 (562)
T 3bk2_A 337 KPG-DTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEV------- 408 (562)
T ss_dssp CTT-CEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCH-------
T ss_pred CCC-CEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCH-------
Confidence 578 9999988777654 334556787776532100 01123466777776543 577777776432
Q ss_pred HHHHHHHHHHHHHhCC
Q 021547 203 YQHLQKIAETARKLGI 218 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~ 218 (311)
..+.++.+++++.|+
T Consensus 409 -~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 -RHQMNFKWLAESMSR 423 (562)
T ss_dssp -HHHHHHHHHHHTSSS
T ss_pred -HHHHHHHHHHHHcCC
Confidence 237777888887664
No 329
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=37.80 E-value=82 Score=26.96 Aligned_cols=26 Identities=4% Similarity=0.075 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+.++.++|++.|+++|+.+.+.-.+.
T Consensus 122 ~~~ea~~l~~~a~~~~~~l~v~~~~R 147 (350)
T 4had_A 122 KAGDIDAVIAARDRNKVVVTEAYMIT 147 (350)
T ss_dssp SGGGGHHHHHHHHHHTCCEEECCGGG
T ss_pred chhhHHHHHHHHHHcCCceeEeeeee
Confidence 44567777777777777777765554
No 330
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=37.75 E-value=1.1e+02 Score=24.97 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=47.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcc---hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPF---YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE- 183 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~- 183 (311)
....+++|.|++..=..+...|.+.| .+|++. ...-.. ....++..+.++..+..+- -|.+.+++.++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLG-AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHH
Confidence 33445565555443356777888889 777653 322221 2233444566666665432 255555554432
Q ss_pred -----CccEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 021547 184 -----NTAAIVIINPC-NPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 184 -----~~~~i~i~~p~-nptG~--~~~~~~l~~l~~ 211 (311)
+... ++.+.. .+.+. ..+.+++++..+
T Consensus 91 ~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 91 VAHFGHLDI-AVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3333 334332 22222 346677665544
No 331
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=37.73 E-value=41 Score=29.57 Aligned_cols=73 Identities=18% Similarity=0.256 Sum_probs=44.9
Q ss_pred hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC---ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN---TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.......+++...+.+.++.+|.+..+.+.+..... ..+.. .+ ..+.+..++.+++++|++.|+++||-||-
T Consensus 38 ~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 38 FIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3456677888888888776667766543221111000 00111 11 12234579999999999999999998884
No 332
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=37.50 E-value=1.6e+02 Score=24.12 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=49.7
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----Ccc
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-----NTA 186 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~ 186 (311)
.+++|.|++.-=..+...|.+.| .+|++..-.-.......+ .+.+...+..+- -|.+.+++.++. ...
T Consensus 4 ~vlVTGas~GIG~aia~~la~~G-a~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAG-DKVCFIDIDEKRSADFAK-ERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHT-TCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-hcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666666554467788888999 777665443333333333 333445444322 255555554432 222
Q ss_pred EEEEeCC-CCCCcc--CCCHHHHHHHHHH
Q 021547 187 AIVIINP-CNPCGN--VLTYQHLQKIAET 212 (311)
Q Consensus 187 ~i~i~~p-~nptG~--~~~~~~l~~l~~l 212 (311)
-+++.|. .++.+. .++.++++++.++
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3455554 233232 4577888776654
No 333
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=37.37 E-value=1.6e+02 Score=23.69 Aligned_cols=65 Identities=23% Similarity=0.035 Sum_probs=33.0
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHc----CcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YESFAKRN----HIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+++|.++...=..+...|.+.| .+|++..-.-.. .....+.. +.++..+..+. -|.+.+++.++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 75 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVD 75 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHH
Confidence 45666554443356777777889 677665433322 22222221 44555554332 25555555443
No 334
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=37.27 E-value=1.6e+02 Score=23.48 Aligned_cols=67 Identities=18% Similarity=0.007 Sum_probs=33.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEE-EEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEV-RHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++ ..+..+. .|.+.+++.+
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASG-ARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAA 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHH
Confidence 34456666555443356777777888 666665433222233333334333 3343321 2556665544
No 335
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=37.24 E-value=27 Score=31.45 Aligned_cols=29 Identities=31% Similarity=0.587 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||+|-++-.+.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 47899999999999999999999986543
No 336
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=37.23 E-value=32 Score=31.36 Aligned_cols=29 Identities=17% Similarity=0.468 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLAF 231 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~ 231 (311)
.+++++|++.|+++|+.||.|-++-+...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 68999999999999999999999986543
No 337
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=37.02 E-value=27 Score=31.66 Aligned_cols=28 Identities=29% Similarity=0.427 Sum_probs=25.0
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
++.|..++.+++++|++.|+++||-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4667789999999999999999998884
No 338
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.99 E-value=1.5e+02 Score=23.29 Aligned_cols=92 Identities=18% Similarity=0.128 Sum_probs=46.9
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCC----
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADE---- 183 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---- 183 (311)
.+++|.|+...=..+...|.+.| .+|++..-......... +..+.++..+..+. -|.+.+++.++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDG-YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHh
Confidence 46666665544456777777888 66766544333222222 23455666655432 266777776653
Q ss_pred --CccEEEEeCCCCCCcc--CCCHHHHHHH
Q 021547 184 --NTAAIVIINPCNPCGN--VLTYQHLQKI 209 (311)
Q Consensus 184 --~~~~i~i~~p~nptG~--~~~~~~l~~l 209 (311)
+...++.+....+.+. ..+.+++++.
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEM 107 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHH
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHH
Confidence 3444443322222222 2366666553
No 339
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=36.78 E-value=47 Score=29.44 Aligned_cols=81 Identities=15% Similarity=0.025 Sum_probs=45.0
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547 175 EAVEALADENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS 253 (311)
Q Consensus 175 ~~l~~~l~~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s 253 (311)
+.|+.+-+-+-+.||.+-- -|-+. .--.+++++|+++|+++|+-+++|-.=..+..=|-.... + +
T Consensus 45 ~Yi~~a~~~Gf~~IFTSL~-~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~d----------l---~ 110 (385)
T 1x7f_A 45 AYISAAARHGFSRIFTCLL-SVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSD----------L---S 110 (385)
T ss_dssp HHHHHHHTTTEEEEEEEEC-CC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCC----------T---H
T ss_pred HHHHHHHHCCCCEEEccCC-ccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH----------H---H
Confidence 4455555566667766531 12111 123567999999999999999999876543211111111 1 3
Q ss_pred CcccCCCCcceeeEEE
Q 021547 254 ISKRWIVPGWRFGWLA 269 (311)
Q Consensus 254 ~sK~~~~~G~r~G~i~ 269 (311)
+=|.+|..|+|+=+=.
T Consensus 111 ~f~~lGi~gLRLD~Gf 126 (385)
T 1x7f_A 111 FFAELGADGIRLDVGF 126 (385)
T ss_dssp HHHHHTCSEEEESSCC
T ss_pred HHHHcCCCEEEEcCCC
Confidence 3344577888876544
No 340
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.45 E-value=87 Score=24.62 Aligned_cols=121 Identities=7% Similarity=-0.040 Sum_probs=0.0
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 167 (311)
.++.|++.+.+...+ ...++-+..+..+--....+.+ ..| ..|++....-..+.. +..++.++.+++...
T Consensus 12 py~~l~~~~~~i~~e------~~~~i~i~~~~l~~~v~~a~~~-~~~-~dVIISRGgta~~lr--~~~~iPVV~I~~s~~ 81 (196)
T 2q5c_A 12 QNENLLNLFPKLALE------KNFIPITKTASLTRASKIAFGL-QDE-VDAIISRGATSDYIK--KSVSIPSISIKVTRF 81 (196)
T ss_dssp SCHHHHHHHHHHHHH------HTCEEEEEECCHHHHHHHHHHH-TTT-CSEEEEEHHHHHHHH--TTCSSCEEEECCCHH
T ss_pred ccHHHHHHHHHHHhh------hCCceEEEECCHHHHHHHHHHh-cCC-CeEEEECChHHHHHH--HhCCCCEEEEcCCHh
Q ss_pred CCcccCHHHHHhhcCCCccEEEEeCCCCCCc---------------cCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 168 RGWEVDLEAVEALADENTAAIVIINPCNPCG---------------NVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG---------------~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+ -+..|..+.+...+..++..++-..| ..-+.++++..++-+++.|+-+|+
T Consensus 82 D----il~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 82 D----TMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp H----HHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred H----HHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEE
No 341
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=36.36 E-value=1.7e+02 Score=23.59 Aligned_cols=33 Identities=24% Similarity=0.099 Sum_probs=20.8
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
....+++|.++...=..+...|.+.| .+|++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 38 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEG-AHIVLVA 38 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEc
Confidence 34456666665544456777777889 6776543
No 342
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=36.26 E-value=34 Score=30.66 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+.||.|-++-+..
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 7889999999999999999999987654
No 343
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=36.21 E-value=26 Score=33.85 Aligned_cols=27 Identities=26% Similarity=0.422 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
.+++++|++.||++|+-||.|-+|-+.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 689999999999999999999998754
No 344
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=36.12 E-value=82 Score=27.27 Aligned_cols=79 Identities=13% Similarity=0.132 Sum_probs=49.9
Q ss_pred CCCCcchHHHHHHc-CcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 021547 142 RPGWPFYESFAKRN-HIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219 (311)
Q Consensus 142 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~ 219 (311)
-|.|....++.... +..+..+-+.+. .-.+.+.+.+. ...+.+++.+.+- +.++.+++.++++++++.
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~------~e~~~~~l~~~a~~~g~r 133 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQKGVT 133 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHHTCE
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCE
Confidence 46677777766553 344443322111 12355555666 6788877765443 336788999999999999
Q ss_pred EEEeccccCCc
Q 021547 220 VIADEVYGHLA 230 (311)
Q Consensus 220 li~D~ay~~~~ 230 (311)
||==++.+.+.
T Consensus 134 liGPNc~Gii~ 144 (334)
T 3mwd_B 134 IIGPATVGGIK 144 (334)
T ss_dssp EECSSCCCEEE
T ss_pred EEccCCccccC
Confidence 98888876543
No 345
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.12 E-value=1.5e+02 Score=24.10 Aligned_cols=65 Identities=18% Similarity=0.069 Sum_probs=33.4
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.++...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- -|.+.+++.+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVF 71 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHH
Confidence 456666555444456777787889 6666653332223333344333444444322 2555555544
No 346
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.85 E-value=1.6e+02 Score=24.12 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=19.3
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..+++|.++...=..+...|.+.| .+|++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEG-ANVTITG 37 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 345666555443356777777889 6666543
No 347
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=35.81 E-value=1.8e+02 Score=23.69 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=20.4
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....++||.|+...=..+...|.+.| .+|++.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~ 43 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADG-ADIIAV 43 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEE
Confidence 34456666665544456777888889 666654
No 348
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=35.81 E-value=1.7e+02 Score=23.65 Aligned_cols=28 Identities=11% Similarity=0.196 Sum_probs=17.4
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKL 216 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~ 216 (311)
..+++.+..+|. ++.+.++++++...+.
T Consensus 92 d~vlv~~gD~Pl---i~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 92 HIVVNVQGDEPL---IPPAIIRQVADNLAAC 119 (252)
T ss_dssp SEEEECCTTCTT---CCHHHHHHHHHHHHHS
T ss_pred CEEEEEeCCeee---cCHHHHHHHHHHHHhc
Confidence 445555556665 6666777777766554
No 349
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.72 E-value=1.3e+02 Score=24.55 Aligned_cols=32 Identities=16% Similarity=0.063 Sum_probs=20.3
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....++||.|+...=..+...|.+.| .+|++.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G-~~V~~~ 45 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEG-ADIIAC 45 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 33456666665544456777888889 666654
No 350
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=35.71 E-value=68 Score=27.69 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhCCEEEEecccc
Q 021547 204 QHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+.++++++.|.++|+.+|+|--+.
T Consensus 83 ~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 83 KRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCc
Confidence 456777777777777777775443
No 351
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=35.70 E-value=1.6e+02 Score=24.17 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=17.6
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
..+++....+|. ++.+.++++++...+.+
T Consensus 108 d~vlv~~gD~Pl---i~~~~i~~li~~~~~~~ 136 (264)
T 3k8d_A 108 TVIVNVQGDEPM---IPATIIRQVADNLAQRQ 136 (264)
T ss_dssp CEEEEECTTCTT---CCHHHHHHHHHHHHTSS
T ss_pred CEEEEEcCCccc---CCHHHHHHHHHHHhhcC
Confidence 445555556665 56666777776665543
No 352
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=35.70 E-value=30 Score=30.88 Aligned_cols=30 Identities=37% Similarity=0.571 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLAF 231 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~ 231 (311)
+.+++++|++.|+++|+-||.|-++-....
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 478999999999999999999999986543
No 353
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=35.68 E-value=80 Score=26.67 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=13.0
Q ss_pred hHHHHHHcCcEEEEeec
Q 021547 148 YESFAKRNHIEVRHFDL 164 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~ 164 (311)
....++..|++.+.+++
T Consensus 46 d~~~l~~~G~n~vRi~i 62 (320)
T 3nco_A 46 YFKIIKERGFDSVRIPI 62 (320)
T ss_dssp HHHHHHHHTCCEEEECC
T ss_pred HHHHHHHCCCCEEEEee
Confidence 45677888888888875
No 354
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.58 E-value=1.7e+02 Score=23.40 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=33.8
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---HHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---AKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...+++|.++...=..+...|.+.| .+|++..-.-...... ++..+.++..+..+- -|.+.+++.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~ 75 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEG-AAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAV 75 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHH
Confidence 3456666665544456777788889 6666543222222222 222354555554432 2555555544
No 355
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=35.45 E-value=1.6e+02 Score=27.88 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=56.2
Q ss_pred CCCCCCEEEeCChHHHHHHHHHHHh---cCC-CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 107 KLSADDIYITLGCMEAVEIILTVIT---RLG-AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 107 ~~~~~~v~~t~g~~~a~~~~~~~l~---~~g-~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.++.+.|.++.++..++...+.+|. ..+ ....+...|.|.- +-..+++. .+..++.+.+++.++
T Consensus 42 ~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~----------RG~mlD~s--R~~f~~~~~ik~~id 109 (627)
T 2epl_X 42 EGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED----------LAYMADCS--RNAVLNLSSAKKMIE 109 (627)
T ss_dssp EEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE----------EEEEEECS--SSCCBCHHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc----------cceEEecC--CCCCCCHHHHHHHHH
Confidence 3456678887666555555555543 222 0234555666642 33333321 111345555555443
Q ss_pred C------CccEEEE----eCCCC----CCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 183 E------NTAAIVI----INPCN----PCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 183 ~------~~~~i~i----~~p~n----ptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
. +.-.+-+ ..+.. +.|..++.+++++|++.|+++||-||-
T Consensus 110 ~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 110 VLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 1 1111111 11122 346689999999999999999999874
No 356
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=35.36 E-value=1.8e+02 Score=23.75 Aligned_cols=64 Identities=8% Similarity=-0.097 Sum_probs=33.6
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
.++||.|+...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+- -|.+.+++.+
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 92 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAV 92 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHH
Confidence 45666555443356777788889 667665433322222 2233455555555432 2555555544
No 357
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.32 E-value=1.6e+02 Score=24.43 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=19.6
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..++||.++...=..+...|.+.| .+|++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~ 57 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEG-AQVTITG 57 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 446666555444456777788889 6666543
No 358
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=35.17 E-value=32 Score=32.30 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+-||.|-++..+.
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 6899999999999999999999987654
No 359
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=35.10 E-value=2.1e+02 Score=24.28 Aligned_cols=103 Identities=15% Similarity=0.034 Sum_probs=50.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhc--CCCCEEEecCC-CC------------cchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547 109 SADDIYITLGCMEAVEIILTVITR--LGAANILLPRP-GW------------PFYESFAKRNHIEVRHFDLLPERGWEVD 173 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p-~~------------~~~~~~~~~~g~~~~~~~~~~~~~~~~d 173 (311)
....|+||.|+...=..++..|.+ .| .+|++..- .- .... .....+..++..++ .|
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl-------~d 79 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADI-------NN 79 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCT-------TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCC-------CC
Confidence 445677776554444566667777 78 66665421 11 1110 11112233443333 26
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCccCCCHHH--------HHHHHHHHHHhCCEEE
Q 021547 174 LEAVEALADENTAAIVIINPCNPCGNVLTYQH--------LQKIAETARKLGILVI 221 (311)
Q Consensus 174 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~--------l~~l~~l~~~~~~~li 221 (311)
.+.++++...+...|+-+...... ..-+.++ ...+++.|++.++.+|
T Consensus 80 ~~~~~~~~~~~~D~vih~A~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 80 PLDLRRLEKLHFDYLFHQAAVSDT-TMLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp HHHHHHHTTSCCSEEEECCCCCGG-GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhccCCCEEEECCccCCc-cccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 677777633455665544332111 1112222 2468888888876533
No 360
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=35.09 E-value=1.8e+02 Score=23.66 Aligned_cols=64 Identities=25% Similarity=0.032 Sum_probs=33.5
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
.++||.|++..=..+...|.+.| .+|++..-.-.... ..++..+.++..+..+- .|.+.+++.+
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 72 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFA 72 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 35555554433356777778889 66766543322222 23333466666655432 2555555544
No 361
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=35.03 E-value=44 Score=30.38 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=36.5
Q ss_pred CcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 169 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
+|-+|.-.+.++...+..++++... .++.++++++.+.|++.|+-+++|-
T Consensus 115 DFI~d~~Qi~ea~~~GAD~ILLi~a------~l~~~~l~~l~~~a~~lgm~~LvEv 164 (452)
T 1pii_A 115 DFIIDPYQIYLARYYQADACLLMLS------VLDDDQYRQLAAVAHSLEMGVLTEV 164 (452)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEEETT------TCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eccCCHHHHHHHHHcCCCEEEEEcc------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3566766666655556666655543 3567889999999999999999884
No 362
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=35.03 E-value=26 Score=31.67 Aligned_cols=28 Identities=32% Similarity=0.497 Sum_probs=24.8
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 195 NPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 195 nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.|.|..++.+++++|++.|+++||-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3567789999999999999999998884
No 363
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=35.01 E-value=1.8e+02 Score=23.48 Aligned_cols=65 Identities=15% Similarity=0.021 Sum_probs=34.6
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..++||.|+...=..+...|.+.| .+|++..-.-..... .+...+.++..+..+. -+.+.+++.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 97 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAGGEAESHACDL-----SHSDAIAAFA 97 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHH
Confidence 445666554443356677777889 677765443333222 2333455666665432 2555555544
No 364
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=34.60 E-value=1.8e+02 Score=23.34 Aligned_cols=66 Identities=24% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCC-cchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
..+++|.++...=..+...|.+.| .+|++..-.- ......+...+.++..+..+. .|.+.+++.++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~ 71 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAG-ANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFA 71 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-CEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHH
Confidence 345666555443356777777889 6666543221 222222333354555554332 25566655543
No 365
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.48 E-value=1.7e+02 Score=24.93 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=21.8
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
.|++..|+ .+++..+ +...+.|+|.|++..|.|.
T Consensus 95 pViaGvg~~~t~~ai~la-~~A~~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 95 PTIVSVSDLTTAKTVRRA-QFAESLGAEAVMVLPISYW 131 (315)
T ss_dssp CBEEECCCSSHHHHHHHH-HHHHHTTCSEEEECCCCSS
T ss_pred cEEEecCCCCHHHHHHHH-HHHHhcCCCEEEECCCCCC
Confidence 46666553 3334333 3444678899999999986
No 366
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=34.45 E-value=30 Score=32.47 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+-||.|-++....
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 36899999999999999999999987644
No 367
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=34.42 E-value=1.7e+02 Score=23.13 Aligned_cols=30 Identities=13% Similarity=-0.076 Sum_probs=18.3
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
.+++|.++...=..+...|.+.| .+|++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G-~~V~~~~ 33 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARG-DRVAALD 33 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 35666554433356677777888 6666554
No 368
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=34.38 E-value=1.7e+02 Score=23.08 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=19.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
....+++|.++...=..+...|.+.| .+|++..
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~ 38 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAG-STVIITG 38 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 33456666554443356677777888 6776543
No 369
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=34.21 E-value=1.2e+02 Score=26.53 Aligned_cols=93 Identities=15% Similarity=0.135 Sum_probs=42.6
Q ss_pred HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCc-cCCC----
Q 021547 129 VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCG-NVLT---- 202 (311)
Q Consensus 129 ~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG-~~~~---- 202 (311)
.+...| ..|++.+.....-...++..|.....+.+....+..--.+.++..++ .+..+|+|-+...-.. ..++
T Consensus 97 ~~~~~g-~~vlyi~~E~s~~~~~a~~~g~d~~~l~i~~~~~~e~~l~~l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~g 175 (366)
T 1xp8_A 97 QAQKAG-GTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAIDVVVVDSVAALTPRAEIEGDMG 175 (366)
T ss_dssp HHHHTT-CCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCSEEEEECTTTCCCSTTC-----
T ss_pred HHHHCC-CeEEEEECCCChhHHHHHHcCCCHHHceeecCCcHHHHHHHHHHHHhcCCCCEEEEeChHHhccccccccccc
Confidence 333456 56665554444333345666654221111111111111222333333 3567777776643221 1110
Q ss_pred -----------HHHHHHHHHHHHHhCCEEEE
Q 021547 203 -----------YQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 203 -----------~~~l~~l~~l~~~~~~~li~ 222 (311)
.+.+.+|..+++++|+.+|+
T Consensus 176 d~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~ 206 (366)
T 1xp8_A 176 DSLPGLQARLMSQALRKLTAILSKTGTAAIF 206 (366)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 13356677778888877665
No 370
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.99 E-value=1e+02 Score=25.98 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=21.7
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
-|++..|+ .+++..+ +...+.|.|.|++..|.|.
T Consensus 71 pviaGvg~~~t~~ai~la-~~A~~~Gadavlv~~P~y~ 107 (294)
T 2ehh_A 71 KVIAGTGGNATHEAVHLT-AHAKEVGADGALVVVPYYN 107 (294)
T ss_dssp EEEEECCCSCHHHHHHHH-HHHHHTTCSEEEEECCCSS
T ss_pred cEEEecCCCCHHHHHHHH-HHHHhcCCCEEEECCCCCC
Confidence 36666554 3444433 3334578899999999885
No 371
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=33.97 E-value=1.4e+02 Score=25.81 Aligned_cols=100 Identities=12% Similarity=0.189 Sum_probs=49.5
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH-----Hhh--cCC-CccEEEEeC
Q 021547 122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV-----EAL--ADE-NTAAIVIIN 192 (311)
Q Consensus 122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l-----~~~--l~~-~~~~i~i~~ 192 (311)
++..+..+... +| ..++..+.........++..|.....+-+.... +.+.+ +.+ +++ .+.++++-+
T Consensus 45 ~Lq~~~~~~~~g~g-~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvVIDS 119 (333)
T 3io5_A 45 GLTMVSSYMRQYPD-AVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVFIDS 119 (333)
T ss_dssp HHHHHHHHHHHCTT-CEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCC-ceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEEEec
Confidence 34444444433 36 677776666554445678888653222111111 22332 222 343 566777776
Q ss_pred CCCCC------ccC-------CCH-----HHHHHHHHHHHHhCCEEE-Eeccc
Q 021547 193 PCNPC------GNV-------LTY-----QHLQKIAETARKLGILVI-ADEVY 226 (311)
Q Consensus 193 p~npt------G~~-------~~~-----~~l~~l~~l~~~~~~~li-~D~ay 226 (311)
.+.-. |.. ... ..+.+|..+++++|+.+| +..++
T Consensus 120 I~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~ 172 (333)
T 3io5_A 120 LGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTY 172 (333)
T ss_dssp STTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC-
T ss_pred ccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCee
Confidence 64321 110 011 235667778999998765 34443
No 372
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=33.89 E-value=1.5e+02 Score=23.95 Aligned_cols=90 Identities=11% Similarity=0.039 Sum_probs=46.7
Q ss_pred EEEeCChHHHHHHHHHHHhcC--CCCEE-EecCCCCcchHHHHHHcCcEEEEeeccCCCC-cccCHHHHHhhcC-CCccE
Q 021547 113 IYITLGCMEAVEIILTVITRL--GAANI-LLPRPGWPFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVEALAD-ENTAA 187 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~--g~d~V-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~l~-~~~~~ 187 (311)
+++.+|+.+.+..++..+.+. +.+-+ ++.++.-......++..|+.+..++.....+ -..+ +++.+.++ .++..
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dl 104 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFD-AALAERLQAYGVDL 104 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHH-HHHHHHHHHTTCSE
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhcc-HHHHHHHHhcCCCE
Confidence 344556656677778887654 21222 2333222334678899999988765432111 0011 22333332 35666
Q ss_pred EEEeCCCCCCccCCCHHHHH
Q 021547 188 IVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 188 i~i~~p~nptG~~~~~~~l~ 207 (311)
+++.. .|.+++.+-+.
T Consensus 105 iv~ag----y~~IL~~~~l~ 120 (229)
T 3auf_A 105 VCLAG----YMRLVRGPMLT 120 (229)
T ss_dssp EEESS----CCSCCCHHHHH
T ss_pred EEEcC----hhHhCCHHHHh
Confidence 66554 46677744443
No 373
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=33.88 E-value=89 Score=27.14 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=38.6
Q ss_pred chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226 (311)
Q Consensus 147 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay 226 (311)
.....++..|++.+.+|+.-. .+ .... ..-++.+ .+.++++++.|.++|+.+|+|--+
T Consensus 56 ~di~~ik~~G~N~vRipi~w~--------~~---~~~~-------g~~d~~~----l~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 56 DMMTFLMQNGFNAVRIPVTWY--------EH---MDAE-------GNVDEAW----MMRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHTTEEEEEECCCCG--------GG---BCTT-------CCBCHHH----HHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHcCCCEEEEcccHH--------Hh---cCCC-------CCcCHHH----HHHHHHHHHHHHHCCCEEEEECCC
Confidence 345677889999999987321 11 0000 0012221 345899999999999999999766
Q ss_pred cC
Q 021547 227 GH 228 (311)
Q Consensus 227 ~~ 228 (311)
..
T Consensus 114 ~~ 115 (353)
T 3l55_A 114 DT 115 (353)
T ss_dssp TB
T ss_pred CC
Confidence 53
No 374
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=33.84 E-value=71 Score=29.36 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhCCEEEEecccc
Q 021547 204 QHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 204 ~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+.++++++.|+++|+.+|+|--+.
T Consensus 86 ~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 86 KRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCC
Confidence 456777777777777777776444
No 375
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=33.84 E-value=1.9e+02 Score=23.40 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=20.8
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
...+++.....|. ++.+.++++++...+.+
T Consensus 91 ~~~vlv~~~D~P~---i~~~~i~~l~~~~~~~~ 120 (262)
T 1vic_A 91 NEIIVNIQGDEPL---IPPVIVRQVADNLAKFN 120 (262)
T ss_dssp TCEEEECCTTCTT---CCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCcCc---cCHHHHHHHHHHHHhcC
Confidence 3456666667776 67778888888776653
No 376
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.75 E-value=31 Score=31.45 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
.+++++|++.||++|+.||.|-++-+.
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~ 128 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHS 128 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcC
Confidence 578999999999999999999998764
No 377
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=33.67 E-value=32 Score=32.44 Aligned_cols=29 Identities=28% Similarity=0.500 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.||++|+.||.|-++-+..
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 46789999999999999999999987643
No 378
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=33.62 E-value=1.1e+02 Score=25.67 Aligned_cols=16 Identities=0% Similarity=-0.064 Sum_probs=11.5
Q ss_pred HHHHHHcCcEEEEeec
Q 021547 149 ESFAKRNHIEVRHFDL 164 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~ 164 (311)
...++..|++.+.+++
T Consensus 37 i~~~~~~G~n~vRi~i 52 (305)
T 1h1n_A 37 IDTLISKGMNIFRVPF 52 (305)
T ss_dssp HHHHHHTTCCEEEEEE
T ss_pred HHHHHHCCCCEEEecc
Confidence 3456678888888876
No 379
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.58 E-value=1.9e+02 Score=23.26 Aligned_cols=34 Identities=15% Similarity=0.035 Sum_probs=20.9
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~ 144 (311)
...+++|.|++..=..+...|.+.| .+|++..-.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~ 40 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDG-YRVVLIARS 40 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHT-CEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECC
Confidence 3445666555443356777788889 677665433
No 380
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=33.56 E-value=2.1e+02 Score=24.50 Aligned_cols=27 Identities=15% Similarity=0.322 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 201 LTYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
.+.++.++|.++++++|+.+.+.-.+.
T Consensus 124 ~~~~ea~~l~~~a~~~g~~~~v~~~~R 150 (350)
T 3rc1_A 124 TDRPQAERLFAVARERGLLLMENFMFL 150 (350)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECGGG
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEeccc
Confidence 356677777788877777777665554
No 381
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.56 E-value=1.4e+02 Score=25.18 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=36.2
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLAG-TTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESS-TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 356789888877654 4666766543 33344568999999988888764 355554
No 382
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=33.46 E-value=75 Score=26.18 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=37.4
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
...++..|+++..+......+..-..+.++.++..+..++++....... +...++.+.+.++.+|.
T Consensus 26 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~--------~~~~~~~~~~~giPvV~ 91 (297)
T 3rot_A 26 KKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTA--------FSKSLQRANKLNIPVIA 91 (297)
T ss_dssp HHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSST--------THHHHHHHHHHTCCEEE
T ss_pred HHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH--------HHHHHHHHHHCCCCEEE
Confidence 4567778888877653211121222344556666788888775443222 34455666677877664
No 383
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.42 E-value=1.3e+02 Score=25.47 Aligned_cols=63 Identities=13% Similarity=0.042 Sum_probs=0.0
Q ss_pred EEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 159 VRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 159 ~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+..+...-..++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~G-ttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSG-TTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCc-cccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
No 384
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=33.37 E-value=2e+02 Score=23.54 Aligned_cols=65 Identities=9% Similarity=-0.043 Sum_probs=33.0
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---HHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---AKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..++||.|+...=..+...|.+.| .+|++..-.-...... ++..+.++..+..+. .|.+.+++.+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~ 112 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSV-SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVI 112 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHH
Confidence 456666555443356777788888 7777643221112222 222355555554432 2556665544
No 385
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=33.33 E-value=1.4e+02 Score=24.34 Aligned_cols=23 Identities=9% Similarity=0.211 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhCCEEEEeccccC
Q 021547 206 LQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
+..+.++++++.+.+|++-+...
T Consensus 149 ~~~~~~~~~~~pl~~vi~H~g~~ 171 (288)
T 2ffi_A 149 IPVLVRALQPYGLDIVIDHFGRP 171 (288)
T ss_dssp HHHHHHHHTTTTCCEEESGGGSC
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 34455555555555555555543
No 386
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.32 E-value=90 Score=26.14 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=37.7
Q ss_pred CcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547 169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224 (311)
Q Consensus 169 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ 224 (311)
+|-+|...+.++...+..++++... .++.++++++.+.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3556777777776667777766553 3567889999999999999888765
No 387
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=33.21 E-value=33 Score=32.68 Aligned_cols=28 Identities=21% Similarity=0.354 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.||++|+-||.|-++-+.
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 5789999999999999999999998764
No 388
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=33.18 E-value=2e+02 Score=23.48 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=19.3
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..+++|.++...=..+...|.+.| .+|++..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 53 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEG-LRVFVCA 53 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 456666555443356777777888 6666543
No 389
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=33.16 E-value=1.8e+02 Score=23.42 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=20.4
Q ss_pred CCCCEEEeCCh-HHHHHHHHHHHhcCCCCEEEecCCC
Q 021547 109 SADDIYITLGC-MEAVEIILTVITRLGAANILLPRPG 144 (311)
Q Consensus 109 ~~~~v~~t~g~-~~a~~~~~~~l~~~g~d~Vl~~~p~ 144 (311)
....++||.|+ +..=..+...|.+.| .+|++..-.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG-ADVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC-CEEEEecCC
Confidence 34456777663 323345666677888 677665433
No 390
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=32.81 E-value=1.6e+02 Score=24.67 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=19.5
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
...++||.|+...=..+...|.+.| .+|++.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G-~~Vv~~ 76 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDG-ADIVAI 76 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-CeEEEE
Confidence 3445666555444456777888889 666654
No 391
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.75 E-value=38 Score=31.58 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.|+++|+.||.|-++-+..
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 7889999999999999999999987643
No 392
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=32.71 E-value=38 Score=31.70 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 36899999999999999999999987643
No 393
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=32.66 E-value=89 Score=26.45 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=37.6
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh----CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL----GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~----~~~li~ 222 (311)
.+..+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIENGIDAVVPVG-TTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 456789888887553 4666766543 34444568999999999888765 467766
No 394
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=32.64 E-value=1.9e+02 Score=24.63 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=21.8
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
.|++..|+ .+++.. .+...+.|+|.|++..|.|.
T Consensus 93 pViaGvg~~st~~ai~l-a~~A~~~Gadavlv~~P~y~ 129 (315)
T 3si9_A 93 PVVAGAGSNSTSEAVEL-AKHAEKAGADAVLVVTPYYN 129 (315)
T ss_dssp CBEEECCCSSHHHHHHH-HHHHHHTTCSEEEEECCCSS
T ss_pred cEEEeCCCCCHHHHHHH-HHHHHhcCCCEEEECCCCCC
Confidence 46666553 333333 34444678899999999985
No 395
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=32.57 E-value=1e+02 Score=25.68 Aligned_cols=17 Identities=12% Similarity=0.298 Sum_probs=9.1
Q ss_pred HHHHHHHHh-CCEEEEec
Q 021547 208 KIAETARKL-GILVIADE 224 (311)
Q Consensus 208 ~l~~l~~~~-~~~li~D~ 224 (311)
.+.++++++ ++.+|++.
T Consensus 173 ~~~~v~~~~P~l~ivl~H 190 (291)
T 3irs_A 173 HIDRVLGDFPDLTVVSSH 190 (291)
T ss_dssp HHHHHHHHCTTCCEEEEG
T ss_pred HHHHHHHHCCCCEEEeec
Confidence 345555555 55555554
No 396
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=32.42 E-value=35 Score=32.25 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.||++|+.||.|-++-+.
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~NH~ 234 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVLNHR 234 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCC
Confidence 3689999999999999999999998764
No 397
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.36 E-value=2.1e+02 Score=23.62 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=20.5
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....++||.|++..=..+...|.+.| .+|++.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~ 58 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREG-ADIIAI 58 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 44456666665544456777788889 666654
No 398
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=32.32 E-value=2.2e+02 Score=23.76 Aligned_cols=69 Identities=23% Similarity=0.340 Sum_probs=41.2
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc---------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF---------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
.|++..|+ .+++.. .+...+.|.|.|++..|.|.. |...++..++.+..+....-.+..++.+.+.+
T Consensus 72 pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 150 (291)
T 3tak_A 72 PIIAGTGANSTREAIEL-TKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVR 150 (291)
T ss_dssp CEEEECCCSSHHHHHHH-HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred eEEEeCCCCCHHHHHHH-HHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHH
Confidence 46766554 333333 333445677999999999852 34455666666666654322344567777766
Q ss_pred hc
Q 021547 180 LA 181 (311)
Q Consensus 180 ~l 181 (311)
+.
T Consensus 151 La 152 (291)
T 3tak_A 151 LA 152 (291)
T ss_dssp HT
T ss_pred HH
Confidence 55
No 399
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=32.13 E-value=54 Score=30.98 Aligned_cols=29 Identities=31% Similarity=0.421 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+-||.|-++....
T Consensus 203 t~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 231 (617)
T 1m7x_A 203 TRDDFRYFIDAAHAAGLNVILDWVPGHFP 231 (617)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTSCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 47899999999999999999999998764
No 400
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=32.06 E-value=2.1e+02 Score=23.39 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=18.4
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 185 TAAIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
...+++....+|. ++.+.++++++..++
T Consensus 98 ~d~vlv~~gD~Pl---i~~~~i~~li~~~~~ 125 (256)
T 3tqd_A 98 DEIIVCLQGDEPL---IPPDAIRKLAEDLDE 125 (256)
T ss_dssp TCEEEEECTTCCC---CCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccc---CCHHHHHHHHHHHHh
Confidence 3455666666666 666777777777665
No 401
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=32.00 E-value=26 Score=30.19 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=32.2
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChH-------------------HHHHHHHHHHhcCCCCEEEec
Q 021547 82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCM-------------------EAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~-------------------~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
..+++..+.++.+.+.+++... ...... |++|+|+| .+.. +...+...|++.+++.
T Consensus 11 ~~p~p~~~~~i~~~i~~~~~~~---~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~a-iAe~~~~~Ga~V~lv~ 86 (313)
T 1p9o_A 11 EFPQPPGAARWAEVMARFAARL---GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGAT-SAEAFLAAGYGVLFLY 86 (313)
T ss_dssp ---------CHHHHHHHHHHHH---HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHH-HHHHHHHTTCEEEEEE
T ss_pred cCCCcccHHHHHHHHHHHhhhh---hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHH-HHHHHHHCCCEEEEEe
Confidence 4555666777778888877532 123456 89999888 4443 4466667885666666
Q ss_pred CCC
Q 021547 142 RPG 144 (311)
Q Consensus 142 ~p~ 144 (311)
.|.
T Consensus 87 g~~ 89 (313)
T 1p9o_A 87 RAR 89 (313)
T ss_dssp ETT
T ss_pred cCC
Confidence 554
No 402
>2l3i_A Aoxki4A, antimicrobial peptide in spider venom; antimicrobial protein; NMR {Araneae}
Probab=31.92 E-value=27 Score=17.69 Aligned_cols=11 Identities=18% Similarity=0.425 Sum_probs=9.1
Q ss_pred cccccccccch
Q 021547 4 EAEKKWGFEVK 14 (311)
Q Consensus 4 ~~~~~~~~~~~ 14 (311)
.|+|+|++++-
T Consensus 3 rcpkswkckaf 13 (30)
T 2l3i_A 3 RCPKSWKCKAF 13 (30)
T ss_dssp CSSSCSCCCHH
T ss_pred CCCcchhHHHH
Confidence 38899999984
No 403
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=31.88 E-value=35 Score=32.75 Aligned_cols=28 Identities=29% Similarity=0.358 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+.||.|-++-+..
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~NHts 143 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPNHTS 143 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcccccc
Confidence 7899999999999999999999987654
No 404
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=31.87 E-value=30 Score=23.28 Aligned_cols=24 Identities=25% Similarity=0.153 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCEEEEeccccCC
Q 021547 206 LQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 206 l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
-.+|.++++++|+.++.|..-...
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LAr~ 52 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLARS 52 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHHHH
Confidence 689999999999999999876543
No 405
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=31.81 E-value=35 Score=32.76 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+.||.|-++-+..
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V~NHts 142 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFAPNHTS 142 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCcCccc
Confidence 7899999999999999999999987644
No 406
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=31.76 E-value=37 Score=17.90 Aligned_cols=19 Identities=42% Similarity=0.506 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHHhCCEE
Q 021547 202 TYQHLQKIAETARKLGILV 220 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~l 220 (311)
+++++++|.+-+++.|+.+
T Consensus 13 tpeelkklkeeakkanirv 31 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhccEEE
Confidence 5789999999999988653
No 407
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=31.75 E-value=35 Score=32.71 Aligned_cols=28 Identities=29% Similarity=0.404 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+.||.|-++-+..
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NHts 138 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNHTS 138 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCC
Confidence 7899999999999999999999987543
No 408
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=31.72 E-value=2.3e+02 Score=23.76 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=39.6
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc---------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF---------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
.|++..|+ .+++.. .+...+.|+|.|++..|.|.. |...++..++.+..+......+..++.+.+.+
T Consensus 78 pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 156 (297)
T 3flu_A 78 PVIAGTGANNTVEAIAL-SQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILR 156 (297)
T ss_dssp CEEEECCCSSHHHHHHH-HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHH
T ss_pred cEEEeCCCcCHHHHHHH-HHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHH
Confidence 46766553 333333 344446788999999998852 33455555666665554322344556666665
Q ss_pred hc
Q 021547 180 LA 181 (311)
Q Consensus 180 ~l 181 (311)
+.
T Consensus 157 La 158 (297)
T 3flu_A 157 LA 158 (297)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 409
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=31.62 E-value=36 Score=32.72 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+.||.|-++-+..
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V~NHts 134 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFVPNHST 134 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 7899999999999999999999987543
No 410
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=31.55 E-value=1.5e+02 Score=23.58 Aligned_cols=89 Identities=11% Similarity=-0.019 Sum_probs=46.2
Q ss_pred EEeCChHHHHHHHHHHHhcC--CCCEE-EecCCCCcchHHHHHHcCcEEEEeeccCCCC-cccCHHHHHhhcC-CCccEE
Q 021547 114 YITLGCMEAVEIILTVITRL--GAANI-LLPRPGWPFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVEALAD-ENTAAI 188 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~--g~d~V-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~l~-~~~~~i 188 (311)
++.+|+.+.+..++..+.+. +.+.+ ++.++.-......++..|+.+..++.....+ -..+ +++.+.++ .++..+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~-~~~~~~l~~~~~Dli 86 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFE-SEILRELKGRQIDWI 86 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhH-HHHHHHHHhcCCCEE
Confidence 34455555566777777654 31222 3344333456788999999988765432111 0001 12333332 356666
Q ss_pred EEeCCCCCCccCCCHHHHH
Q 021547 189 VIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~ 207 (311)
++.. .|.+++.+-+.
T Consensus 87 v~a~----y~~il~~~~l~ 101 (212)
T 3av3_A 87 ALAG----YMRLIGPTLLS 101 (212)
T ss_dssp EESS----CCSCCCHHHHH
T ss_pred EEch----hhhhCCHHHHh
Confidence 6543 46677744443
No 411
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=31.53 E-value=2e+02 Score=24.56 Aligned_cols=35 Identities=26% Similarity=0.281 Sum_probs=29.7
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
.+|.|...+.+.+.++++.|+++|+.|++|--|+.
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd 84 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSD 84 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 66778888889999999999999999999965543
No 412
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=31.49 E-value=41 Score=31.35 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 46899999999999999999999987543
No 413
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=31.49 E-value=97 Score=26.78 Aligned_cols=15 Identities=7% Similarity=0.332 Sum_probs=12.4
Q ss_pred HHHHHcCcEEEEeec
Q 021547 150 SFAKRNHIEVRHFDL 164 (311)
Q Consensus 150 ~~~~~~g~~~~~~~~ 164 (311)
..++..|++.+.+|+
T Consensus 50 ~~i~~~G~N~vRipi 64 (340)
T 3qr3_A 50 HFVNEDGMTIFRLPV 64 (340)
T ss_dssp HHHHHHCCCEEEEEE
T ss_pred HHHHHCCCCEEEEEe
Confidence 567788999999987
No 414
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=31.37 E-value=1.1e+02 Score=25.29 Aligned_cols=99 Identities=15% Similarity=0.069 Sum_probs=47.3
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEE-ecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANIL-LPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i 190 (311)
.|++|.++...=..+...|.+.|...|. +....-..-.......+.+++..++ .|.+.+.+++. +...++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~-------~d~~~l~~~~~-~~d~vi~ 78 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQ-------DDQVIMELALN-GAYATFI 78 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCT-------TCHHHHHHHHT-TCSEEEE
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecC-------CCHHHHHHHHh-cCCEEEE
Confidence 4666655322223455556554412444 3332221111223345666665543 26778887776 3555554
Q ss_pred eCCCCCC-ccCCCHHHHHHHHHHHHHhCC
Q 021547 191 INPCNPC-GNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 191 ~~p~npt-G~~~~~~~l~~l~~l~~~~~~ 218 (311)
+....+. .........+.+++.|++.++
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv 107 (299)
T 2wm3_A 79 VTNYWESCSQEQEVKQGKLLADLARRLGL 107 (299)
T ss_dssp CCCHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred eCCCCccccchHHHHHHHHHHHHHHHcCC
Confidence 4321110 000112235677888888776
No 415
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=31.26 E-value=2.5e+02 Score=24.04 Aligned_cols=27 Identities=19% Similarity=0.133 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHhCCEE-EEecccc
Q 021547 201 LTYQHLQKIAETARKLGILV-IADEVYG 227 (311)
Q Consensus 201 ~~~~~l~~l~~l~~~~~~~l-i~D~ay~ 227 (311)
.+.++.++|.++|+++|+.+ .+.-.+.
T Consensus 122 ~~~~e~~~l~~~a~~~g~~~~~v~~~~R 149 (357)
T 3ec7_A 122 VTAADCQRVIEAEQKNGKRMVQIGFMRR 149 (357)
T ss_dssp SSHHHHHHHHHHHHHHTSCCEEEECGGG
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEeeccc
Confidence 46788999999999998865 5654443
No 416
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=31.20 E-value=2.2e+02 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=20.8
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
....++||.++...=..+...|.+.| .+|++..
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~ 65 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAG-ATIVFND 65 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 34456666655544466777788889 6666543
No 417
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=31.05 E-value=1.8e+02 Score=23.74 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=21.1
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRP 143 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p 143 (311)
....+++|.++...=..+...|.+.| .+|++..-
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~r 61 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAG-ARVFICAR 61 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeC
Confidence 33456666555444456777777889 67766543
No 418
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=31.03 E-value=2e+02 Score=22.97 Aligned_cols=65 Identities=9% Similarity=-0.081 Sum_probs=32.1
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
.+++|.++...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+- .|.+.+++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 71 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVE 71 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 35566554443356777777888 666654322222222 2222354555554432 25555555443
No 419
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=31.01 E-value=2e+02 Score=22.87 Aligned_cols=68 Identities=15% Similarity=0.006 Sum_probs=36.7
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.++...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+. .|.+.+++.++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 34456666665544456777788889 667665433332222 2333455666665432 25555555443
No 420
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=30.96 E-value=1.3e+02 Score=25.28 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=36.8
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
.++.+|.+.+++.++ .+..+++++- ++--+..++.+|++++++.+.+. ++.||+
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAVG-TTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCc-cccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 356789888877543 4666766544 34444568899999998888764 456665
No 421
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=30.85 E-value=36 Score=31.68 Aligned_cols=28 Identities=29% Similarity=0.430 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.|+++|+.||.|-++-+.
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 104 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVINHT 104 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 3789999999999999999999998754
No 422
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.84 E-value=2.5e+02 Score=23.84 Aligned_cols=69 Identities=22% Similarity=0.237 Sum_probs=37.7
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc---------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF---------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
.|++..|+ .+++.. .+...+.|+|.|++..|.|.. |...++..++.+..+......+..++.+.+.+
T Consensus 94 pViaGvg~~st~eai~l-a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 172 (314)
T 3qze_A 94 PVIAGTGANSTREAVAL-TEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVER 172 (314)
T ss_dssp CEEEECCCSSHHHHHHH-HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred cEEEeCCCcCHHHHHHH-HHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHH
Confidence 46776554 333433 334446787999999998853 23444445555555543222233455555555
Q ss_pred hc
Q 021547 180 LA 181 (311)
Q Consensus 180 ~l 181 (311)
+.
T Consensus 173 La 174 (314)
T 3qze_A 173 LS 174 (314)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 423
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=30.71 E-value=3.2e+02 Score=25.06 Aligned_cols=98 Identities=17% Similarity=0.108 Sum_probs=49.2
Q ss_pred CCCCEEEeCChHHHH-HHHHHHHhcCCCCEEEec--CCC---------------CcchHHHHHHcCcEEEEeeccCCCCc
Q 021547 109 SADDIYITLGCMEAV-EIILTVITRLGAANILLP--RPG---------------WPFYESFAKRNHIEVRHFDLLPERGW 170 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~-~~~~~~l~~~g~d~Vl~~--~p~---------------~~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (311)
.++.+++.+|++.++ ..+...|.+.|...|++. ... -......++..|.++..+..+-
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv---- 324 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDL---- 324 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCT----
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCC----
Confidence 445666666666666 456666777784435543 221 1123334455677777776542
Q ss_pred ccCHHHHHhhcCC----CccEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 021547 171 EVDLEAVEALADE----NTAAIVIINPC-NPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 171 ~~d~~~l~~~l~~----~~~~i~i~~p~-nptG~--~~~~~~l~~l~~ 211 (311)
-|.+.+++++.. ...-+++.+.. ...+. ..+.+++++..+
T Consensus 325 -td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 325 -TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp -TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 256666665432 22223333332 22222 346666665443
No 424
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=30.66 E-value=1.4e+02 Score=24.28 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=46.5
Q ss_pred EEEeCChHHHHHHHHHHHhcC-CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547 113 IYITLGCMEAVEIILTVITRL-GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII 191 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~-g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 191 (311)
|++|.++...=..++..|.+. | .+|.+..-.-... ......+.+++..++ .|.+.++++++ +...++.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g-~~V~~~~R~~~~~-~~~~~~~v~~~~~D~-------~d~~~l~~~~~-~~d~vi~~ 72 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHI-DHFHIGVRNVEKV-PDDWRGKVSVRQLDY-------FNQESMVEAFK-GMDTVVFI 72 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-TTEEEEESSGGGS-CGGGBTTBEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHhhCCC-CcEEEEECCHHHH-HHhhhCCCEEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 666654322223344446654 7 5554432111111 111224555555543 26788888776 44555544
Q ss_pred CC-CCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 192 NP-CNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 192 ~p-~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
.. .++.. ......+.+++.|++.++
T Consensus 73 a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 73 PSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred CCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 33 22211 122446788889988875
No 425
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=30.53 E-value=2.4e+02 Score=23.66 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=21.6
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
.|++..|+ .+++.. .+...+.|.|.|++..|.|.
T Consensus 79 pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv~~P~y~ 115 (301)
T 3m5v_A 79 KVLAGAGSNATHEAVGL-AKFAKEHGADGILSVAPYYN 115 (301)
T ss_dssp EEEEECCCSSHHHHHHH-HHHHHHTTCSEEEEECCCSS
T ss_pred eEEEeCCCCCHHHHHHH-HHHHHHcCCCEEEEcCCCCC
Confidence 46665553 333333 34444678899999999986
No 426
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=30.50 E-value=43 Score=31.49 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+.||.|-++-+..
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 46899999999999999999999987643
No 427
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=30.50 E-value=67 Score=25.92 Aligned_cols=66 Identities=11% Similarity=0.089 Sum_probs=31.2
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC-ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN-TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
...++..|.++..+......+.....+.++.++..+ ..++++....... .....+.+.+.++.+|.
T Consensus 23 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~--------~~~~~~~~~~~~ipvV~ 89 (276)
T 3ksm_A 23 QKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAED--------LTPSVAQYRARNIPVLV 89 (276)
T ss_dssp HHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTT--------THHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHH--------HHHHHHHHHHCCCcEEE
Confidence 445666777776654321111111123445555556 7777665432111 23344445556665443
No 428
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=30.48 E-value=2e+02 Score=22.72 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=18.7
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..+++|.++...=..+...|.+.| .+|++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~ 37 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEG-AKVMITG 37 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 345555554433356777777888 6666543
No 429
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.44 E-value=1.6e+02 Score=24.94 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=37.8
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVGG-STGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECe-eccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 356899998887643 5677766553 33444568999999999988764 466665
No 430
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=30.37 E-value=2.4e+02 Score=23.61 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=51.2
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCC--cchHHHHHH-------cCcEEEEeeccCCCCcccCHHHHHh
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGW--PFYESFAKR-------NHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~--~~~~~~~~~-------~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
...|+||.|+...=..++..|.+.| ..|++. ...- ......... .+++++..++ .|.+.+++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 4567777654433355666777788 666654 3221 111112221 4555555443 26788888
Q ss_pred hcCCCccEEEEeCCC-CCCccCCCHH--------HHHHHHHHHHHhCC
Q 021547 180 LADENTAAIVIINPC-NPCGNVLTYQ--------HLQKIAETARKLGI 218 (311)
Q Consensus 180 ~l~~~~~~i~i~~p~-nptG~~~~~~--------~l~~l~~l~~~~~~ 218 (311)
++. +...|+.+... ++....-+.+ -...+++.|++.++
T Consensus 97 ~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMK-GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTT-TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred Hhc-CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 776 55565544432 1111111111 13457888888875
No 431
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.29 E-value=2.2e+02 Score=23.14 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=20.3
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
....+++|.|+...=..+...|.+.| .+|++.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G-~~V~~~ 40 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAG-ADIAIC 40 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEE
Confidence 33456666655544456778888889 666654
No 432
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=30.22 E-value=2.2e+02 Score=23.05 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=29.1
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEeecc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLL 165 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~ 165 (311)
....++||.++...=..+...|.+.| .+|++..-.-.......+ ..+.++..+..+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 78 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAG-ARLVLSGRDVSELDAARRALGEQFGTDVHTVAID 78 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 33445565554443356777788889 667665433322222221 145555555543
No 433
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=30.21 E-value=2.2e+02 Score=23.07 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=20.7
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
....+++|.++...=..+...|.+.| ..|++..
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~ 62 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLK-SKLVLWD 62 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEE
Confidence 44456666655443356777777888 6666544
No 434
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=30.19 E-value=39 Score=32.52 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.||++|+.||.|-++-+..
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~NHts 338 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMHHTN 338 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccC
Confidence 47899999999999999999999987543
No 435
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=30.17 E-value=51 Score=31.13 Aligned_cols=29 Identities=31% Similarity=0.557 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.|+++|+-||.|-++....
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHFG 219 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 47899999999999999999999998754
No 436
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.94 E-value=1.6e+02 Score=22.18 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC
Q 021547 121 EAVEIILTVITRL--GAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197 (311)
Q Consensus 121 ~a~~~~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 197 (311)
..+..+...+.+- | -+++-.. +....++. .|+++..+.-.++.+ +. .+-+.+..+..-+++..| .|.
T Consensus 24 ~~~v~~ak~~~~ll~G-f~l~AT~----gTa~~L~e~~Gl~v~~v~k~~eGG---~p-~I~d~I~~geIdlVInt~-~pl 93 (152)
T 1b93_A 24 QMLMSWVERHQPLLEQ-HVLYATG----TTGNLISRATGMNVNAMLSGPMGG---DQ-QVGALISEGKIDVLIFFW-DPL 93 (152)
T ss_dssp HHHHHHHHHTHHHHTT-SEEEEET----THHHHHHHHHCCCCEEECCGGGTH---HH-HHHHHHHTTCCCEEEEEC-CTT
T ss_pred HHHHHHHHHHHHHhCC-CEEEEcc----HHHHHHHHHhCceeEEEEecCCCC---Cc-hHHHHHHCCCccEEEEcC-Ccc
Confidence 3344444444444 6 4555444 23344455 777777764322211 22 455555554344444443 444
Q ss_pred ccCCC-HHHHHHHHHHHHHhCCEEEEecccc
Q 021547 198 GNVLT-YQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 198 G~~~~-~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
| ..+ ..+...|.+.|-.||+.++..-+-+
T Consensus 94 ~-~~~h~~D~~~IrR~A~~~~IP~~T~latA 123 (152)
T 1b93_A 94 N-AVPHDPDVKALLRLATVWNIPVATNVATA 123 (152)
T ss_dssp S-CCTTHHHHHHHHHHHHHTTCCEESSHHHH
T ss_pred c-CCcccccHHHHHHHHHHcCCCEEeCHHHH
Confidence 5 345 7889999999999999987654433
No 437
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=29.90 E-value=2.2e+02 Score=22.95 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=42.9
Q ss_pred EEEeCChHHHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547 113 IYITLGCMEAVEIILTVITRL--GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190 (311)
Q Consensus 113 v~~t~g~~~a~~~~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i 190 (311)
|++|.++...=..+...|.+. | .+|.+..-.-..... ....+.+++..++ .|.+.++++++ +...++.
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi~ 71 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPA-SQIVAIVRNPAKAQA-LAAQGITVRQADY-------GDEAALTSALQ-GVEKLLL 71 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTCHH-HHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred EEEEcCCchHHHHHHHHHHhhCCC-ceEEEEEcChHhhhh-hhcCCCeEEEcCC-------CCHHHHHHHHh-CCCEEEE
Confidence 566654333234555666665 7 555443211111111 2234555554443 25677777765 3445544
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547 191 INPCNPCGNVLTYQHLQKIAETARKLGI 218 (311)
Q Consensus 191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~ 218 (311)
+....+.. .......+++.|++.++
T Consensus 72 ~a~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 72 ISSSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp CC-----------CHHHHHHHHHHHHTC
T ss_pred eCCCCchH---HHHHHHHHHHHHHHcCC
Confidence 43222211 12235677777877764
No 438
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=29.88 E-value=37 Score=31.54 Aligned_cols=28 Identities=25% Similarity=0.385 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.|+++|+.||.|-++-..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~ 104 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVNHT 104 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 3789999999999999999999998654
No 439
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=29.85 E-value=1.7e+02 Score=25.50 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=34.4
Q ss_pred CCcccCHHHHHhhc----CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALA----DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l----~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
.++.+|.+.+++.+ ..+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecc-cccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 35678888877754 34666666543 33334567888888888777654 456655
No 440
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.80 E-value=2.3e+02 Score=23.21 Aligned_cols=100 Identities=16% Similarity=0.100 Sum_probs=51.1
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEE-ecCCCC---cchHHH---HHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANIL-LPRPGW---PFYESF---AKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~---~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (311)
..|++|.++...=..++..|.+.| ..|. +....- +.-... ....+.+++..++ .|.+.+.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~d~~~l~~~~~- 75 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL-------DDHQRLVDALK- 75 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS-------SCHHHHHHHHT-
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC-------CCHHHHHHHHh-
Confidence 357777653322244556666777 5554 444322 111111 1234555554433 26788888776
Q ss_pred CccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhC-CEEEE
Q 021547 184 NTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLG-ILVIA 222 (311)
Q Consensus 184 ~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~-~~li~ 222 (311)
+...++.+......+ ... .-..+++.|++.+ +--++
T Consensus 76 ~~d~vi~~a~~~~~~~~~~---~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 76 QVDVVISALAGGVLSHHIL---EQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp TCSEEEECCCCSSSSTTTT---THHHHHHHHHHSCCCSEEE
T ss_pred CCCEEEECCccccchhhHH---HHHHHHHHHHhcCCCceEE
Confidence 455555544322111 222 2578888999887 64333
No 441
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=29.77 E-value=38 Score=28.91 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=38.4
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh-CCEEEEeccccCCc
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-GILVIADEVYGHLA 230 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~-~~~li~D~ay~~~~ 230 (311)
-.+.+++++..+.+.+++.++. . +.++..++.+.|+++ |+.+|-+++.+.+.
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~G----~--~~~~~~~l~~~a~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITEG----I--PQQDMVRVKHRLLRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC----C--CHHHHHHHHHHHTTCSSCEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECCC----C--ChHHHHHHHHHHHhcCCcEEEeCCCCeEec
Confidence 3556666777788887666553 2 445577999999999 99999899877654
No 442
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=29.71 E-value=35 Score=32.01 Aligned_cols=29 Identities=28% Similarity=0.495 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.+++++|++.||++|+-||.|-++..+.
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 46899999999999999999999987654
No 443
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=29.71 E-value=2.2e+02 Score=22.96 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=22.6
Q ss_pred CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC
Q 021547 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144 (311)
Q Consensus 108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~ 144 (311)
.....+++|.|++..=..+...|.+.| .+|++..-.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~ 41 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAG-AAVAFCARD 41 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCC
Confidence 344456666665544466777788889 677665433
No 444
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.61 E-value=1.9e+02 Score=23.53 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=18.5
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..+++|.++...=..+...|.+.| .+|++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 37 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREG-AKVTITG 37 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 345555544433356777777889 6666543
No 445
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=29.16 E-value=1.4e+02 Score=23.91 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=26.0
Q ss_pred CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 184 NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 184 ~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.+.+++..-. -|+.|.... +.++.+++++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar---~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAH---TDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCC---HHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 4455444332 678899888 77788888899998874
No 446
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=29.14 E-value=2.3e+02 Score=22.87 Aligned_cols=32 Identities=19% Similarity=0.084 Sum_probs=19.9
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
...+++|.++...=..+...|.+.| .+|++..
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 44 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG-AKLSLVD 44 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3456666555444456777788889 6666543
No 447
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=29.07 E-value=1.5e+02 Score=23.95 Aligned_cols=102 Identities=13% Similarity=0.098 Sum_probs=54.9
Q ss_pred HH-HHHHHHHHHhcCCCCEEEecCCCCcc---hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547 120 ME-AVEIILTVITRLGAANILLPRPGWPF---YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN 195 (311)
Q Consensus 120 ~~-a~~~~~~~l~~~g~d~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n 195 (311)
|. ++..+ ..+...| .++++..|.-.. -...+.+.|.....+++. +.+++.+.+..+...|++--.+.
T Consensus 42 TT~Llr~~-~r~~~~g-~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEaQF 112 (219)
T 3e2i_A 42 SEELIRRL-RRGIYAK-QKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEVQF 112 (219)
T ss_dssp HHHHHHHH-HHHHHTT-CCEEEEEEC-----------CBTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCGGG
T ss_pred HHHHHHHH-HHHHHcC-CceEEEEeccCCcchhhhHHHhcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEechhc
Confidence 44 44444 4444567 677777665432 134556677666665543 23444444444556666655444
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238 (311)
Q Consensus 196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~ 238 (311)
++++.++.+.+++ ..|+.||+=.-=.. |.++++..
T Consensus 113 -----f~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~~F~~ 147 (219)
T 3e2i_A 113 -----FDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGEPFEP 147 (219)
T ss_dssp -----SCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSCBCTT
T ss_pred -----CCHHHHHHHHHHH-HCCCEEEEeecccc--cccCCCcc
Confidence 5556788888888 57999998554333 33444443
No 448
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=28.99 E-value=2.2e+02 Score=22.76 Aligned_cols=29 Identities=17% Similarity=0.056 Sum_probs=17.8
Q ss_pred CEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547 112 DIYITLGCMEAVEIILTVITRLGAANILLP 141 (311)
Q Consensus 112 ~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~ 141 (311)
.+++|.++...=..+...|.+.| .+|++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~ 32 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADG-FDIAVA 32 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHT-CEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 35566554443356777777888 666654
No 449
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.93 E-value=2.3e+02 Score=22.86 Aligned_cols=67 Identities=12% Similarity=-0.029 Sum_probs=36.2
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.++...=..+...|.+.| .+|++..-.-..... .+...+.++..+..+- -|.+.+++.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 79 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI-----TDDAQVAHLV 79 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 34456666665544466777788889 677665443332222 2333455666555432 2555555544
No 450
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.65 E-value=2.3e+02 Score=23.82 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=37.9
Q ss_pred EEEeCC---hHHHHHHHHHHHhcCCCCEEEecCCCCcc---------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhh
Q 021547 113 IYITLG---CMEAVEIILTVITRLGAANILLPRPGWPF---------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180 (311)
Q Consensus 113 v~~t~g---~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 180 (311)
|++..| ..+++..+ +...+.|+|.|++..|.|.. |...++..++.+..+......+..++.+.+.++
T Consensus 76 viaGvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 154 (300)
T 3eb2_A 76 VVAGVASTSVADAVAQA-KLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARL 154 (300)
T ss_dssp BEEEEEESSHHHHHHHH-HHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHH-HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHH
Confidence 565444 34444443 33445677999999998852 334455555555555543333445555555554
No 451
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.63 E-value=1.3e+02 Score=25.34 Aligned_cols=54 Identities=20% Similarity=0.333 Sum_probs=35.8
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
.++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 15 KDGGVDWKSLEKLVEWHIEQGTNSIVAVG-TTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEECc-cccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 356788888877554 4666665443 33344568888888888888764 455555
No 452
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.58 E-value=2.4e+02 Score=23.07 Aligned_cols=97 Identities=13% Similarity=0.008 Sum_probs=49.3
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----------chHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----------FYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 178 (311)
....+++|.++...=..+...|.+.| .+|++..-.-. ......+..+.++..+..+- -|.+.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~ 81 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADG-ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI-----RDGDAVA 81 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT-----TSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 34456666665544456777788889 66665432211 12233444566777665532 2555555
Q ss_pred hhcCC------CccEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 021547 179 ALADE------NTAAIVIINPCNPCGN--VLTYQHLQKIAE 211 (311)
Q Consensus 179 ~~l~~------~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 211 (311)
+.+.. +...++-+......+. ..+.+++++..+
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 54431 3344443322222222 356677776544
No 453
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=28.48 E-value=38 Score=34.26 Aligned_cols=28 Identities=29% Similarity=0.436 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 203 YQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
.+++++|++.||++|+-||.|-+|-++.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6899999999999999999999997543
No 454
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=28.41 E-value=1.2e+02 Score=26.32 Aligned_cols=18 Identities=11% Similarity=-0.036 Sum_probs=13.2
Q ss_pred hHHHHHHcCcEEEEeecc
Q 021547 148 YESFAKRNHIEVRHFDLL 165 (311)
Q Consensus 148 ~~~~~~~~g~~~~~~~~~ 165 (311)
....++..|++.+.+++.
T Consensus 67 di~~i~~~G~N~vRipi~ 84 (376)
T 3ayr_A 67 MFKVLIDNQFNVFRIPTT 84 (376)
T ss_dssp HHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHcCCCEEEEeeE
Confidence 345667789998888763
No 455
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=28.28 E-value=60 Score=30.76 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.++++++++.|+++|+-||.|-++..+.
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 47899999999999999999999998754
No 456
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=28.14 E-value=2.6e+02 Score=23.32 Aligned_cols=93 Identities=11% Similarity=0.008 Sum_probs=47.6
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA 187 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 187 (311)
....|+||.++...=..++..|.+.| ..|++. ...-. .+..++..++ .|.+.+++++. +...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~--------~~~~~~~~Dl-------~d~~~~~~~~~-~~d~ 80 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLRPSG--------TGGEEVVGSL-------EDGQALSDAIM-GVSA 80 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESSCCS--------SCCSEEESCT-------TCHHHHHHHHT-TCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCC--------CCccEEecCc-------CCHHHHHHHHh-CCCE
Confidence 34467887664443355667777778 555543 32211 3444444433 26677877776 5555
Q ss_pred EEEeCC-CCCCccCC------CHHHHHHHHHHHHHhCC
Q 021547 188 IVIINP-CNPCGNVL------TYQHLQKIAETARKLGI 218 (311)
Q Consensus 188 i~i~~p-~nptG~~~------~~~~l~~l~~l~~~~~~ 218 (311)
|+.+.. ..+..... ...-...+++.|.+.++
T Consensus 81 vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 81 VLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 554433 22221110 00113567888888875
No 457
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=28.07 E-value=2.5e+02 Score=23.00 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=19.6
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~ 142 (311)
..+++|.|+...=..+...|.+.| .+|++..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G-~~V~~~~ 57 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLG-AQCVIAS 57 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 456666555443456777777888 6676654
No 458
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=27.98 E-value=2.5e+02 Score=22.98 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=22.0
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRP 143 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p 143 (311)
....++||.|+...=..+...|.+.| .+|++..-
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G-~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAG-ANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 33456676665544466777788889 67776543
No 459
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=27.97 E-value=82 Score=24.89 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=31.9
Q ss_pred CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
+.++|+++++.....+++... .+.. ++++++.+++++-.+++
T Consensus 18 ~~~~l~~al~s~~~~ifll~g-----~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVMLET-----HVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTSSCCEEEECSE-----ETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCCCCEEEEecC-----cHHH---HHHHHHHHHHcCCeEEE
Confidence 778999998887788777653 3333 99999999999755554
No 460
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=27.82 E-value=2.3e+02 Score=22.52 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=34.5
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-.... ..++..+.++..+..+. .|.+.+++.++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~ 82 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAG-ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVR 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHH
Confidence 33456666555443356777777888 67766543222221 22233354555554432 25566655443
No 461
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=27.79 E-value=2.3e+02 Score=22.49 Aligned_cols=66 Identities=12% Similarity=0.014 Sum_probs=32.7
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC-CCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRP-GWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p-~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
..+++|.++...=..+...|.+.| .+|++..- .-..... .++..+.++..+..+. .|.+.+++.++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 74 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQG-ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVK 74 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 345666554433356777777888 66665432 2222222 2223354555554432 25566655443
No 462
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=27.50 E-value=1e+02 Score=25.95 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=21.7
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
-|++..|+ .+++..+ +...+.|.|.|++..|.|.
T Consensus 71 pviaGvg~~~t~~ai~la-~~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFV-RHAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp CBEEECCCSSHHHHHHHH-HHHHHTTCSEEEEECCCSS
T ss_pred cEEEecCCccHHHHHHHH-HHHHHcCCCEEEEcCCCCC
Confidence 46666554 3344433 3334578899999999885
No 463
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=27.47 E-value=2e+02 Score=23.41 Aligned_cols=93 Identities=13% Similarity=0.134 Sum_probs=47.4
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEE
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAI 188 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i 188 (311)
...+++|.|++.-=..+...|.+.| .+|++..-.-.... +..+.++..+..+- -|.+.+++.+++ ...-+
T Consensus 11 GK~alVTGas~GIG~aia~~la~~G-a~Vv~~~~~~~~~~---~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELG-AEVVALGLDADGVH---APRHPRIRREELDI-----TDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTSTT---SCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHh---hhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCCE
Confidence 3445666555544467778888999 66665432221111 12233344443321 255666665543 22224
Q ss_pred EEeCCC-CCCccCCCHHHHHHHHH
Q 021547 189 VIINPC-NPCGNVLTYQHLQKIAE 211 (311)
Q Consensus 189 ~i~~p~-nptG~~~~~~~l~~l~~ 211 (311)
++.|.. +.....++.++++++.+
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~ 105 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLR 105 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHH
T ss_pred EEECCCCCCCcccCCHHHHHHHHH
Confidence 555542 33334567777776654
No 464
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.36 E-value=2.4e+02 Score=22.51 Aligned_cols=90 Identities=12% Similarity=-0.011 Sum_probs=47.6
Q ss_pred EEeCChHHHHHHHHHHHhcCCC--CEEE-ecCCCCcchHHHHHHcCcEEEEeeccCCCCc-ccCHHHHHhhc-CCCccEE
Q 021547 114 YITLGCMEAVEIILTVITRLGA--ANIL-LPRPGWPFYESFAKRNHIEVRHFDLLPERGW-EVDLEAVEALA-DENTAAI 188 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~g~--d~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~d~~~l~~~l-~~~~~~i 188 (311)
++.+|....+.+++.+...... +.++ +.+..-......++..|+.+..++.....+- ..+ +++.+.+ ..++.++
T Consensus 7 vl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d-~~~~~~l~~~~~Dli 85 (211)
T 3p9x_A 7 IFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYE-IEVVQQLKEKQIDFV 85 (211)
T ss_dssp EECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhhH-HHHHHHHHhcCCCEE
Confidence 4556655678888887743221 3332 3332223456788999999887754321110 011 2333333 3366666
Q ss_pred EEeCCCCCCccCCCHHHHHH
Q 021547 189 VIINPCNPCGNVLTYQHLQK 208 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~~ 208 (311)
++.. .|.+++.+-+..
T Consensus 86 v~ag----y~~Il~~~~l~~ 101 (211)
T 3p9x_A 86 VLAG----YMRLVGPTLLGA 101 (211)
T ss_dssp EESS----CCSCCCHHHHHH
T ss_pred EEeC----chhhcCHHHHhh
Confidence 6554 466777544443
No 465
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.24 E-value=1.8e+02 Score=24.39 Aligned_cols=53 Identities=38% Similarity=0.397 Sum_probs=34.0
Q ss_pred CcccCHHHHHhhc----CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 169 GWEVDLEAVEALA----DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 169 ~~~~d~~~l~~~l----~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
++.+|.+.+++.+ ..+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCG-TTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4578888777754 44666666543 33344458888888888887754 355553
No 466
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.19 E-value=2.7e+02 Score=23.20 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=21.3
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
.|++..|+ .+++..+ +...+.|.|.|++..|.|.
T Consensus 73 pviaGvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~ 109 (292)
T 3daq_A 73 PVIAGTGTNDTEKSIQAS-IQAKALGADAIMLITPYYN 109 (292)
T ss_dssp CEEEECCCSCHHHHHHHH-HHHHHHTCSEEEEECCCSS
T ss_pred cEEEeCCcccHHHHHHHH-HHHHHcCCCEEEECCCCCC
Confidence 46665553 3334333 3344567799999999885
No 467
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=27.17 E-value=2.8e+02 Score=23.32 Aligned_cols=70 Identities=16% Similarity=0.361 Sum_probs=42.7
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCcc---------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWPF---------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA 179 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 179 (311)
-|++..|+ .+++..+ +...+.|.|.|++..|.|.. |...++..++.+..+....-.+..++.+.+.+
T Consensus 87 pviaGvg~~st~~ai~la-~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 165 (304)
T 3cpr_A 87 KLIAGVGTNNTRTSVELA-EAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRR 165 (304)
T ss_dssp EEEEECCCSCHHHHHHHH-HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHH
T ss_pred cEEecCCCCCHHHHHHHH-HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHH
Confidence 36666554 4444433 33346788999999998852 34456666667666664322345577777777
Q ss_pred hcC
Q 021547 180 LAD 182 (311)
Q Consensus 180 ~l~ 182 (311)
+.+
T Consensus 166 La~ 168 (304)
T 3cpr_A 166 LSE 168 (304)
T ss_dssp HTT
T ss_pred HHc
Confidence 653
No 468
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=27.05 E-value=2.4e+02 Score=22.55 Aligned_cols=31 Identities=13% Similarity=0.080 Sum_probs=18.5
Q ss_pred CCEEEeCChHHHHHHHHHHHhc---CCCCEEEecC
Q 021547 111 DDIYITLGCMEAVEIILTVITR---LGAANILLPR 142 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~---~g~d~Vl~~~ 142 (311)
..+++|.++...=..+...|.+ .| .+|++..
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G-~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSA 40 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTT-CEEEEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCC-CeEEEEe
Confidence 3456665554433566667776 78 6776653
No 469
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=27.03 E-value=2.5e+02 Score=22.78 Aligned_cols=94 Identities=17% Similarity=0.046 Sum_probs=45.1
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--- 183 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 183 (311)
...++||.|+...=..+...|.+.| .+|++..-.-.... ..++..+.++..+..+- -|.+.+++.+..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRG-AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 3445555554443356777788889 67766543332222 22333444444444322 255555554431
Q ss_pred ---CccEEEEeCCC-CCCc--cCCCHHHHHHHH
Q 021547 184 ---NTAAIVIINPC-NPCG--NVLTYQHLQKIA 210 (311)
Q Consensus 184 ---~~~~i~i~~p~-nptG--~~~~~~~l~~l~ 210 (311)
+... ++.+.. ...+ ...+.+++++..
T Consensus 102 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~ 133 (270)
T 3ftp_A 102 EFGALNV-LVNNAGITQDQLAMRMKDDEWDAVI 133 (270)
T ss_dssp HHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCcccCCHHHHHHHH
Confidence 3333 444432 2222 234666666543
No 470
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=26.93 E-value=49 Score=31.53 Aligned_cols=28 Identities=29% Similarity=0.374 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++.|+++|+.||.|-++-+.
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~NH~ 181 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVLNHT 181 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 4789999999999999999999998654
No 471
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=26.92 E-value=2.4e+02 Score=22.65 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=33.7
Q ss_pred CCCCEEEeCCh--HHHHHHHHHHHhcCCCCEEEecCCCCcc-----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGC--MEAVEIILTVITRLGAANILLPRPGWPF-----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~--~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....++||.|+ ...=..+...|.+.| .+|++..-.-.. .....+..+.++..+..+- -|.+.+++.+
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 92 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMG-AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLV 92 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTS-CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCC-CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHH
Confidence 44456666654 233345666777888 666654322221 1223333465666655432 2555555543
No 472
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=26.91 E-value=1e+02 Score=26.73 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH----HhhcC-CCccEEEEeCCC
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV----EALAD-ENTAAIVIINPC 194 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l----~~~l~-~~~~~i~i~~p~ 194 (311)
|.....++..+...| ..|++.+.....-...++..|.....+.+.... +.+.+ +..+. .++.++++-++.
T Consensus 75 TtLal~la~~~~~~g-~~vlyi~~E~~~~~~~a~~lG~~~~~l~i~~~~----~~e~~l~~~~~l~~~~~~~lIVIDsl~ 149 (349)
T 2zr9_A 75 TTVALHAVANAQAAG-GIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPD----TGEQALEIADMLVRSGALDIIVIDSVA 149 (349)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEESSCCCCHHHHHHTTCCGGGCEEECCS----SHHHHHHHHHHHHTTTCCSEEEEECGG
T ss_pred HHHHHHHHHHHHhCC-CeEEEEECCCCcCHHHHHHcCCCHHHeEEecCC----CHHHHHHHHHHHHhcCCCCEEEEcChH
Confidence 433333333444556 555554433332233456666442221111111 23332 22333 357788887764
Q ss_pred CCC---------ccC-------CCHHHHHHHHHHHHHhCCEEEE
Q 021547 195 NPC---------GNV-------LTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 195 npt---------G~~-------~~~~~l~~l~~l~~~~~~~li~ 222 (311)
.-. |.. .-.+.+.+|..+++++|+.+|+
T Consensus 150 ~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~ 193 (349)
T 2zr9_A 150 ALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIF 193 (349)
T ss_dssp GCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 322 111 0023456777778888876655
No 473
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.90 E-value=1.2e+02 Score=25.55 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=61.4
Q ss_pred CCcHHHHHHHHHHHhhcCCCCC------CCCCE-EEeCChHHHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcCc
Q 021547 87 FGLPLARRAVAEYLNRDLPYKL------SADDI-YITLGCMEAVEIILTVITRL--GAANILLPRPGWPFYESFAKRNHI 157 (311)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~g~~~------~~~~v-~~t~g~~~a~~~~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g~ 157 (311)
....+|++++.+.-. .++..+ .+-+| ++.+|..+.+..++...... ..+-+++.+ .++.....++..|+
T Consensus 62 ~~~~~L~~~f~~la~-~l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gI 139 (286)
T 3n0v_A 62 FDEAGFRAGLAERSE-AFGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS-NHPDLEPLAHWHKI 139 (286)
T ss_dssp CCHHHHHHHHHHHHG-GGTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE-SSSTTHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHH-HcCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe-CcHHHHHHHHHcCC
Confidence 356788888876544 344321 12344 44566666788888776432 113333222 23344567899999
Q ss_pred EEEEeeccCCCCcccC-HHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHH
Q 021547 158 EVRHFDLLPERGWEVD-LEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQK 208 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d-~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~ 208 (311)
.+..+|....+ ... .+++.+.+++ ++.++++.. .+.+++++-++.
T Consensus 140 p~~~~~~~~~~--r~~~~~~~~~~l~~~~~Dlivla~----y~~il~~~~l~~ 186 (286)
T 3n0v_A 140 PYYHFALDPKD--KPGQERKVLQVIEETGAELVILAR----YMQVLSPELCRR 186 (286)
T ss_dssp CEEECCCBTTB--HHHHHHHHHHHHHHHTCSEEEESS----CCSCCCHHHHHH
T ss_pred CEEEeCCCcCC--HHHHHHHHHHHHHhcCCCEEEecc----cccccCHHHHhh
Confidence 98887753211 111 1234344433 666766554 566777544443
No 474
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=26.89 E-value=1.4e+02 Score=25.04 Aligned_cols=54 Identities=24% Similarity=0.206 Sum_probs=36.5
Q ss_pred CCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 168 RGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 168 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 15 EKGNVCRASLKKLIDYHVASGTSAIVSVG-TTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 356789988887654 4666766543 33444568999999999888764 355553
No 475
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.86 E-value=2.4e+02 Score=22.47 Aligned_cols=65 Identities=14% Similarity=0.021 Sum_probs=32.8
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcc---hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPF---YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.|+...=..+...|.+.| .+|++.. ..-.. .....+..+.++..+..+- .|.+.+++.+
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 82 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDG-FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAF 82 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTT-EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHH
Confidence 345555554433356777788889 6666532 22222 2233344555555554432 2555555544
No 476
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=26.85 E-value=63 Score=30.09 Aligned_cols=29 Identities=34% Similarity=0.533 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHLA 230 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~ 230 (311)
+.++++++++.|+++|+-||.|-++..+.
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVVYNHVG 194 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 36899999999999999999999997654
No 477
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.81 E-value=1.4e+02 Score=25.29 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=0.0
Q ss_pred EEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEE
Q 021547 159 VRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--GILVIA 222 (311)
Q Consensus 159 ~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~ 222 (311)
+..+...-..++.+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLG-ILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEEST-GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCc-cCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
No 478
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=26.71 E-value=50 Score=31.37 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
+.+++++|++-|+++|+.||.|-++-+.
T Consensus 161 t~~d~~~Lv~~ah~~GI~VilD~V~NH~ 188 (628)
T 1g5a_A 161 TIGDLREVIAALHEAGISAVVDFIFNHT 188 (628)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 3789999999999999999999998654
No 479
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.68 E-value=1.5e+02 Score=24.88 Aligned_cols=53 Identities=23% Similarity=0.319 Sum_probs=32.1
Q ss_pred CcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh---CCEEEE
Q 021547 169 GWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL---GILVIA 222 (311)
Q Consensus 169 ~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~---~~~li~ 222 (311)
+..+|.+.+++.++ .+..+++++- ++--+..++.+|.+++++.+.+. ++.||+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVG-TTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45678777766543 4566665543 33334457888888888777653 355553
No 480
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.49 E-value=1.9e+02 Score=22.89 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=45.9
Q ss_pred EEeCChHHHHHHHHHHHhcC--CCCEE-EecCCCCcchHHHHHHcCcEEEEeeccCCCC-cccCHHHHHhhcC-CCccEE
Q 021547 114 YITLGCMEAVEIILTVITRL--GAANI-LLPRPGWPFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVEALAD-ENTAAI 188 (311)
Q Consensus 114 ~~t~g~~~a~~~~~~~l~~~--g~d~V-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~l~-~~~~~i 188 (311)
++.+|....+..++..+... +.+-+ ++.++.-..-...++..|+.+..++.....+ -..+ +++.+.++ -++..+
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dli 83 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFD-SAIDLVLEEFSIDIV 83 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhh-HHHHHHHHhcCCCEE
Confidence 34555555677777776543 31322 3344433334577899999988765432111 0011 22333333 356666
Q ss_pred EEeCCCCCCccCCCHHHHH
Q 021547 189 VIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 189 ~i~~p~nptG~~~~~~~l~ 207 (311)
++.. .|.+++.+-+.
T Consensus 84 v~a~----y~~il~~~~l~ 98 (209)
T 1meo_A 84 CLAG----FMRILSGPFVQ 98 (209)
T ss_dssp EEES----CCSCCCHHHHH
T ss_pred EEcc----hhhhCCHHHHh
Confidence 6554 46677744443
No 481
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=26.46 E-value=41 Score=23.40 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCEEEEeccccC
Q 021547 205 HLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
--++|.++++++|+.++.|..-..
T Consensus 43 ~A~~I~~~A~e~gVPi~e~~~LAr 66 (97)
T 3t7y_A 43 RAKRIIAEAEKYGVPIMRNVPLAH 66 (97)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHHH
T ss_pred HHHHHHHHHHHcCCeEEECHHHHH
Confidence 368899999999999999987654
No 482
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=26.37 E-value=2.5e+02 Score=22.49 Aligned_cols=65 Identities=11% Similarity=0.050 Sum_probs=33.1
Q ss_pred CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH---HcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK---RNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
..+++|.|+...=..+...|.+.| .+|++..-.-.......+ ..+.++..+..+- -|.+.+++.+
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 74 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMI 74 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHH
Confidence 345555554433356777788889 677765433333222222 2344555554432 2555555544
No 483
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.32 E-value=2.6e+02 Score=22.55 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=21.7
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~ 144 (311)
....+++|.|+...=..+...|.+.| .+|++..-.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~ 43 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAG-ANVAVAGRS 43 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 34456666655544456777788889 677665433
No 484
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=26.25 E-value=2.5e+02 Score=22.46 Aligned_cols=67 Identities=12% Similarity=-0.038 Sum_probs=34.9
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
....+++|.++...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+- -|.+.+++.+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELM 77 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 34456777665544456777787889 666654322222222 2223355665555432 2555555544
No 485
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=26.25 E-value=1.2e+02 Score=24.97 Aligned_cols=66 Identities=11% Similarity=-0.052 Sum_probs=38.3
Q ss_pred CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547 110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181 (311)
Q Consensus 110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 181 (311)
...+++|.|+...=..+...|.+.| .+|++..-.-.......+..+.++..+..+- .+.+.+++.+
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 70 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEG-ARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAA 70 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 3456666665544467777888889 7777665444444455555555565555432 2455555443
No 486
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=26.16 E-value=2e+02 Score=23.41 Aligned_cols=26 Identities=27% Similarity=0.273 Sum_probs=13.8
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547 187 AIVIINPCNPCGNVLTYQHLQKIAETARK 215 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~ 215 (311)
.+++.....|. ++.+.+.++++...+
T Consensus 93 ~vlv~~gD~Pl---i~~~~i~~li~~~~~ 118 (253)
T 4fcu_A 93 IIVNVQGDEPL---LPAQLVQQVAKLLVD 118 (253)
T ss_dssp EEEECCTTCTT---CCHHHHHHHHHHHHH
T ss_pred EEEEEeCCccc---CCHHHHHHHHHHHHh
Confidence 34444445555 555556666655544
No 487
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=26.04 E-value=2.4e+02 Score=22.17 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCC-CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCC
Q 021547 120 MEAVEIILTVITRLG-AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNP 196 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g-~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~np 196 (311)
...+..++..+.+.+ .+.|++... .......++..|.++..-+-....+..-..+.+...+.. +...+++.+..+|
T Consensus 28 kpli~~~i~~~~~~~~~~~ivv~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~P 106 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVFQSVWVSTD-HDEIENVAKQFGAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSP 106 (229)
T ss_dssp EEHHHHHHHHHHHHTCCSEEEEEES-CHHHHHHHHHTTCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCT
T ss_pred EEHHHHHHHHHHhCCCcCEEEEECC-hHHHHHHHHHcCCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 344555555554433 145554432 233344445556655322210000111112333333321 3445666677777
Q ss_pred CccCCCHHHHHHHHHHHHHhC
Q 021547 197 CGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 197 tG~~~~~~~l~~l~~l~~~~~ 217 (311)
. .+.+.++++++.+.+.+
T Consensus 107 l---i~~~~i~~l~~~~~~~~ 124 (229)
T 1qwj_A 107 C---LHPTDLQKVAEMIREEG 124 (229)
T ss_dssp T---CCHHHHHHHHHHHHSSC
T ss_pred c---CCHHHHHHHHHHHHhCC
Confidence 6 67777888887776554
No 488
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=25.94 E-value=1.9e+02 Score=24.38 Aligned_cols=116 Identities=9% Similarity=-0.003 Sum_probs=56.3
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----chHHHHH------HcCc
Q 021547 88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----FYESFAK------RNHI 157 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----~~~~~~~------~~g~ 157 (311)
|..+..+.+.+-+.- ....|+||.++...=..++..|.+.| ..|++..-.-. ......+ ..++
T Consensus 11 ~~~~~~~~~~~~~~~------~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
T 1sb8_A 11 GMMSRYEELRKELPA------QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83 (352)
T ss_dssp -CCCHHHHHHHHHHH------SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE
T ss_pred HHHHHHHhhchhcCc------cCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCccchhhHHHHhhhcccccCCce
Confidence 445566666665532 33467777664433345666677778 66665432211 1111111 1344
Q ss_pred EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC-CCH--------HHHHHHHHHHHHhCC
Q 021547 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV-LTY--------QHLQKIAETARKLGI 218 (311)
Q Consensus 158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~--------~~l~~l~~l~~~~~~ 218 (311)
.++..++ .|.+.++++++ +...|+.+......+.. -+. .-...+++.|.+.++
T Consensus 84 ~~~~~Dl-------~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 84 KFIQGDI-------RNLDDCNNACA-GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp EEEECCT-------TSHHHHHHHHT-TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEEECCC-------CCHHHHHHHhc-CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4444333 25677777766 45555544332111100 011 113567788887764
No 489
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=25.92 E-value=1.4e+02 Score=24.16 Aligned_cols=64 Identities=23% Similarity=0.165 Sum_probs=35.9
Q ss_pred HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222 (311)
Q Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 222 (311)
...++..|+.+..+... .+.....+.++.++..+..++++....... ....++.+.+.++.+|.
T Consensus 31 ~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--------~~~~~~~~~~~~iPvV~ 94 (293)
T 3l6u_A 31 KAEAKANKYEALVATSQ--NSRISEREQILEFVHLKVDAIFITTLDDVY--------IGSAIEEAKKAGIPVFA 94 (293)
T ss_dssp HHHHHHTTCEEEEEECS--SCHHHHHHHHHHHHHTTCSEEEEECSCTTT--------THHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCCEEEEECCC--CCHHHHHHHHHHHHHcCCCEEEEecCChHH--------HHHHHHHHHHcCCCEEE
Confidence 45677788888876542 111112244555566678888776443222 33445556666776554
No 490
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=25.90 E-value=1.4e+02 Score=25.43 Aligned_cols=114 Identities=12% Similarity=0.084 Sum_probs=57.9
Q ss_pred CcHHHHHHHHHHHhhcCCCCC------CCCCE-EEeCChHHHHHHHHHHHhcCCC-CEEEecCCCCcchHHHHHHcCcEE
Q 021547 88 GLPLARRAVAEYLNRDLPYKL------SADDI-YITLGCMEAVEIILTVITRLGA-ANILLPRPGWPFYESFAKRNHIEV 159 (311)
Q Consensus 88 g~~~lr~~ia~~l~~~~g~~~------~~~~v-~~t~g~~~a~~~~~~~l~~~g~-d~Vl~~~p~~~~~~~~~~~~g~~~ 159 (311)
...+|++++.+.-.+ ++..+ .+.+| ++.+|..+.+..++........ -+|..--..++.....++..|+.+
T Consensus 78 ~~~~L~~~l~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~ 156 (302)
T 3o1l_A 78 DLDGFREAFTPIAEE-FSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPY 156 (302)
T ss_dssp CHHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCE
T ss_pred CHHHHHHHHHHHHHH-hCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCE
Confidence 467888888654332 33211 12344 4456655677777777643210 123322222233456789999998
Q ss_pred EEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHH
Q 021547 160 RHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQ 207 (311)
Q Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~ 207 (311)
..++....+.... .+++.+.++ .++.++++.. .+.+++++-++
T Consensus 157 ~~~~~~~~~r~~~-~~~~~~~l~~~~~DliVlag----ym~IL~~~~l~ 200 (302)
T 3o1l_A 157 YHVPVDPKDKEPA-FAEVSRLVGHHQADVVVLAR----YMQILPPQLCR 200 (302)
T ss_dssp EECCCCSSCCHHH-HHHHHHHHHHTTCSEEEESS----CCSCCCTTHHH
T ss_pred EEcCCCcCCHHHH-HHHHHHHHHHhCCCEEEHhH----hhhhcCHHHHh
Confidence 8876532111111 123434343 3666766654 45556644333
No 491
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=25.90 E-value=1.5e+02 Score=26.71 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=51.4
Q ss_pred ChHHHHHHHHHHHhcCCCCEEE-ecCCCC-cch----HHHHHHcCcEEEEeeccCCCCcccCHHH-----HHhhcCCCcc
Q 021547 118 GCMEAVEIILTVITRLGAANIL-LPRPGW-PFY----ESFAKRNHIEVRHFDLLPERGWEVDLEA-----VEALADENTA 186 (311)
Q Consensus 118 g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~-~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~-----l~~~l~~~~~ 186 (311)
|=|.....+...+.+.| .+|+ +....| +.- ..+....|..+...+. ..++.. ++.+...+..
T Consensus 112 GKTTt~~kLA~~l~~~G-~kVllv~~D~~R~aa~eqL~~~~~~~gvpv~~~~~------~~dp~~i~~~al~~a~~~~~D 184 (443)
T 3dm5_A 112 GKTTTVAKLARYFQKRG-YKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQ------EKDAIKLAKEGVDYFKSKGVD 184 (443)
T ss_dssp SHHHHHHHHHHHHHTTT-CCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTT------CCCHHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHHCC-CeEEEEeCCCcchhHHHHHHHHHHhcCCcEEecCC------CCCHHHHHHHHHHHHHhCCCC
Confidence 33555666667777778 5554 443333 322 2344555655443211 124332 2333334577
Q ss_pred EEEEeCCCCCCccCCCH---HHHHHHHHHHHHhCCEEEEecccc
Q 021547 187 AIVIINPCNPCGNVLTY---QHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 187 ~i~i~~p~nptG~~~~~---~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
.+++-++..-. .+. +++.++.+......+++|+|...+
T Consensus 185 vVIIDTaGrl~---~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 185 IIIVDTAGRHK---EDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp EEEEECCCCSS---CCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred EEEEECCCccc---chHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 88887773211 222 234445455555578999998764
No 492
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=25.89 E-value=36 Score=30.00 Aligned_cols=111 Identities=14% Similarity=0.035 Sum_probs=62.6
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547 175 EAVEALADENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS 253 (311)
Q Consensus 175 ~~l~~~l~~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s 253 (311)
+.|+.+-+.+-+.||.+- +-|-+. ..-.+++++|+++|+++|+-+++|-.-..+..=|-.... + +
T Consensus 21 ~yi~~a~~~Gf~~IFTSL-~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~d----------l---~ 86 (372)
T 2p0o_A 21 IYIKKMKALGFDGIFTSL-HIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDE----------L---E 86 (372)
T ss_dssp HHHHHHHHTTCCEEEEEE-CCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTB----------C---H
T ss_pred HHHHHHHHCCCCEEEccC-CccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH----------H---H
Confidence 445555555666666553 112111 123467999999999999999999876543211111111 1 3
Q ss_pred CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547 254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL 308 (311)
Q Consensus 254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 308 (311)
+=|.+|..|+|+=+=... +.+..+........+.|++...-+..++
T Consensus 87 ~~~~lGi~glRLD~Gf~~---------~eia~ls~nlkIeLNASti~~~~l~~l~ 132 (372)
T 2p0o_A 87 PLIELGVTGLRMDYGITI---------EQMAHASHKIDIGLNASTITLEEVAELK 132 (372)
T ss_dssp HHHHHTCCEEEECSSCCH---------HHHHHHHTTSEEEEETTTCCHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCH---------HHHHHHhcCCEEEEECccCCHHHHHHHH
Confidence 445568999998765432 2345554444444566665555555444
No 493
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=25.82 E-value=2.5e+02 Score=22.20 Aligned_cols=68 Identities=13% Similarity=-0.037 Sum_probs=33.4
Q ss_pred CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182 (311)
Q Consensus 109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (311)
....+++|.|+...=..+...|.+.| .+|++..-.-..... .++..+.++..+..+. .|.+.+++.++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALAD 80 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 33456666554433356777777888 666654332222221 2222344555444322 25566655543
No 494
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.81 E-value=44 Score=23.03 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCEEEEeccccC
Q 021547 205 HLQKIAETARKLGILVIADEVYGH 228 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~ 228 (311)
.-.+|.++++++|+.++.|..-..
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~LAr 51 (93)
T 2vt1_B 28 CALAVRKYANEVGIPTVRDVKLAR 51 (93)
T ss_dssp HHHHHHHHHHHTTCCEEECHHHHH
T ss_pred HHHHHHHHHHHcCCCEEECHHHHH
Confidence 368999999999999999987654
No 495
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=25.76 E-value=53 Score=31.68 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEecccc
Q 021547 202 TYQHLQKIAETARKLGILVIADEVYG 227 (311)
Q Consensus 202 ~~~~l~~l~~l~~~~~~~li~D~ay~ 227 (311)
+.+++++|++.|+++|+-||.|-++.
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 46899999999999999999999875
No 496
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=25.70 E-value=81 Score=28.43 Aligned_cols=96 Identities=7% Similarity=0.053 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547 120 MEAVEIILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198 (311)
Q Consensus 120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 198 (311)
.+++..+...+ ++- +-+.+++|.... +..+.+.... ..+|+.-++.+..+..++.+.+..+..-++..-++.-.|
T Consensus 276 ~eai~~~~~~l-~~y-~i~~iEdPl~~dD~~g~~~l~~~--~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGG 351 (436)
T 2al1_A 276 PQLADLYHSLM-KRY-PIVSIEDPFAEDDWEAWSHFFKT--AGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGT 351 (436)
T ss_dssp HHHHHHHHHHH-HHS-CEEEEECCSCTTCHHHHHHHHTT--CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCC
T ss_pred HHHHHHHHHHH-HhC-CcEEEECCCCCcCHHHHHHHHhc--CCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCC
Confidence 34444444434 444 678899987653 2222222221 223333333333478899988877655555555543333
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547 199 NVLTYQHLQKIAETARKLGILVIAD 223 (311)
Q Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~D 223 (311)
. .+..+++++|+++|+.+++=
T Consensus 352 i----tea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 352 L----SESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp H----HHHHHHHHHHHHTTCEEEEE
T ss_pred H----HHHHHHHHHHHHcCCeEEEe
Confidence 2 26889999999999987653
No 497
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=25.56 E-value=1e+02 Score=30.32 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=53.5
Q ss_pred CCCCcchHHHHHHc---CcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547 142 RPGWPFYESFAKRN---HIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217 (311)
Q Consensus 142 ~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~ 217 (311)
-|+|.....+.... .+-++.+|. ..-.+.++++.. ...+.+++.+-+.| ..+.++|.++|+++|
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~------~~v~~av~ea~~~~Gvk~~Viis~Gf~------e~~~~~l~~~A~~~g 617 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASL------RSAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKG 617 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCT------TTHHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHT
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCH------HHHHHHHHHHHhhCCCCEEEEeCCCCC------HHHHHHHHHHHHHcC
Confidence 47777777766653 344444443 135677888888 78898877665543 345789999999999
Q ss_pred CEEEEeccccCCc
Q 021547 218 ILVIADEVYGHLA 230 (311)
Q Consensus 218 ~~li~D~ay~~~~ 230 (311)
+.||==++.+.+.
T Consensus 618 ~rliGPNc~Gii~ 630 (829)
T 3pff_A 618 VTIIGPATVGGIK 630 (829)
T ss_dssp CEEECSSCCCEEE
T ss_pred CEEEcCCCcccCc
Confidence 9998877776544
No 498
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=25.55 E-value=2.9e+02 Score=22.97 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=21.5
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
-|++..|+ .+++..+ +...+.|.|.|++..|.|.
T Consensus 71 pviaGvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 71 QVIAGAGSNCTEEAIELS-VFAEDVGADAVLSITPYYN 107 (289)
T ss_dssp EEEEECCCSSHHHHHHHH-HHHHHHTCSEEEEECCCSS
T ss_pred cEEEeCCCCCHHHHHHHH-HHHHhcCCCEEEECCCCCC
Confidence 36666554 3444433 3334567799999999885
No 499
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.53 E-value=2.3e+02 Score=23.66 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=21.9
Q ss_pred CEEEeCCh---HHHHHHHHHHHhcCCCCEEEecCCCCc
Q 021547 112 DIYITLGC---MEAVEIILTVITRLGAANILLPRPGWP 146 (311)
Q Consensus 112 ~v~~t~g~---~~a~~~~~~~l~~~g~d~Vl~~~p~~~ 146 (311)
.|++..|+ .+++. ..+...+.|.|.|++..|.|.
T Consensus 72 pviaGvg~~~t~~ai~-la~~a~~~Gadavlv~~P~y~ 108 (292)
T 2ojp_A 72 PVIAGTGANATAEAIS-LTQRFNDSGIVGCLTVTPYYN 108 (292)
T ss_dssp CEEEECCCSSHHHHHH-HHHHTTTSSCSEEEEECCCSS
T ss_pred cEEEecCCccHHHHHH-HHHHHHhcCCCEEEECCCCCC
Confidence 47776665 33333 333345678899999999885
No 500
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=25.44 E-value=44 Score=23.30 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCC
Q 021547 205 HLQKIAETARKLGILVIADEVYGHL 229 (311)
Q Consensus 205 ~l~~l~~l~~~~~~~li~D~ay~~~ 229 (311)
--.+|.++++++|+.|+.|..-...
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~LAr~ 52 (98)
T 3c01_E 28 RALAVRAYAEKVGVPVIVDIKLARS 52 (98)
T ss_dssp HHHHHHHHHHHHTCCEEECHHHHHH
T ss_pred HHHHHHHHHHHcCCCeecCHHHHHH
Confidence 3689999999999999999876643
Done!