BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021549
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CAF2|VF345_ASFWA Uncharacterized protein D345L OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=War-119 PE=3 SV=1
Length = 345
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 50/189 (26%)
Query: 56 LAVVACVTQNDMLQRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVI 115
+ C+ ++ QRSD W A RR ++ S ++ LG K EK +
Sbjct: 1 METFVCLFKDSPQQRSDAWHAARRTQVGGSDLASVLGLNPYKSYYITLAEKANLFK---- 56
Query: 116 ENSKRCAMEWGVLNEAAAIDRYK-----SITGHDV----SSLGFAVHAEEQLDWLGASPD 166
+N R A WG L E + D + ++ G ++ + LG+ H+ SPD
Sbjct: 57 KNLNRAACSWGTLFERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSN--------SPD 108
Query: 167 GL----LG---------------CFPGGG----ILEVKCPYNKGKPEIALPWSTVPFYYM 203
G LG C+ ++E+K PYN+ ++VP YYM
Sbjct: 109 GFCYLTLGYTQQSWEIKTIFNNVCYEATKRIPVLVEIKSPYNRKIK------NSVPSYYM 162
Query: 204 PQVQGQMEI 212
PQ+Q + +
Sbjct: 163 PQIQSGLAL 171
>sp|P0CAF1|VF345_ASFP4 Uncharacterized protein D345L OS=African swine fever virus (isolate
Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-121
PE=3 SV=1
Length = 345
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 50/189 (26%)
Query: 56 LAVVACVTQNDMLQRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVI 115
+ C+ ++ QRSD W A+R ++ S ++ LG K EK +
Sbjct: 1 METFVCLFKDSPQQRSDAWHAVRHTQVGGSDLASILGLNPYKSYYITLAEKANLFK---- 56
Query: 116 ENSKRCAMEWGVLNEAAAIDRYK-----SITGHDV----SSLGFAVHAEEQLDWLGASPD 166
+N R A WG L E + D + ++ G ++ + LG+ H+ SPD
Sbjct: 57 KNLNRAACSWGTLFERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSN--------SPD 108
Query: 167 GL----LG---------------CFPGGG----ILEVKCPYNKGKPEIALPWSTVPFYYM 203
G LG C+ ++E+K PYN+ ++VP YYM
Sbjct: 109 GFCYLTLGYTQQSWEIKTIFNNVCYEATKRIPVLVEIKSPYNRKIK------NSVPSYYM 162
Query: 204 PQVQGQMEI 212
PQ+Q + +
Sbjct: 163 PQIQSGLAL 171
>sp|Q65182|VF345_ASFB7 Uncharacterized protein D345L OS=African swine fever virus (strain
Badajoz 1971 Vero-adapted) GN=Ba71V-109 PE=3 SV=1
Length = 345
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 50/176 (28%)
Query: 69 QRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVIENSKRCAMEWGVL 128
QRSD W A+RR ++ S ++ LG K + EK + +N R A WG L
Sbjct: 14 QRSDAWHAIRRTQVGGSDLASVLGLNPYKSYYIILAEKANLFK----KNLNRAACSWGTL 69
Query: 129 NEAAAIDRYK-----SITGHDV----SSLGFAVHAEEQLDWLGASPDGLLGCFPGGG--- 176
E + D + ++ G ++ + LG+ H+ SPDG G
Sbjct: 70 FERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSN--------SPDGFCHLTLGYTQQS 121
Query: 177 --------------------ILEVKCPYNKGKPEIALPWSTVPFYYMPQVQGQMEI 212
++E+K P+N+ ++VP YYMPQ+Q + +
Sbjct: 122 WEIKTIFNNVRYEATKRIPVLVEIKSPFNRKIK------NSVPSYYMPQIQSGLAL 171
>sp|P45907|YQAJ_BACSU Uncharacterized protein YqaJ OS=Bacillus subtilis (strain 168)
GN=yqaJ PE=4 SV=1
Length = 319
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 26/253 (10%)
Query: 61 CVTQNDMLQRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVIENSKR 120
+ +N + R DEW RR + S S LG K K ELW +K + + S+
Sbjct: 8 VLAKNSEMSR-DEWLIERRKGIGGSDASIILGLNKWKTPFELWLDKTGQVP---VSESQS 63
Query: 121 CAMEWGVLNEAAAIDRYKSITGHDVSSLGFAVHAEEQLDWLGASPDGLLGCFPGGGILEV 180
A +G L E ++ +G V A+ + +++ A+ D ++ ILE
Sbjct: 64 EAAYFGSLLEDIVAKEFEIRSGKKVRRKK-AILRHPEYNFILANVDRMI--VGEKAILEC 120
Query: 181 KC--PYNKGKPEIALPWSTVPFYYMPQVQGQMEILDREWVDLYCWTPNGSTIF--RVIRR 236
K YN + E +P Y+ QVQ + +L E+ Y G F + I R
Sbjct: 121 KTTSAYNLKEWED----EEIPESYIVQVQHYLGVLGPEYRKAYFAVLIGGNKFVWKEIER 176
Query: 237 RDYWELIHGILQ---EFWWENVV----PAKEALSMGREELATSYDPTSTHRLTGLAIVKS 289
D ELI I + EFW + V+ PA + S E L Y T ++ L
Sbjct: 177 DD--ELIDMIFKAEIEFWNDKVLGGQAPALDGSSAAEEYLKKRYAETENNKAIDLTAANR 234
Query: 290 LKLASESKLLCKE 302
++ + LL KE
Sbjct: 235 ERI--QQYLLIKE 245
>sp|Q65225|VF345_ASFM2 Uncharacterized protein D345L OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-117 PE=3 SV=2
Length = 345
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 50/176 (28%)
Query: 69 QRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVIENSKRCAMEWGVL 128
QRS+ W A RR ++ S ++ LG K EK + +N A WG L
Sbjct: 14 QRSNAWHATRRTQVGGSDLASILGLNPYKSYYITLAEKANLFK----KNLNHAACSWGTL 69
Query: 129 NEAAAIDRYK-----SITGHDV----SSLGFAVHAEEQLDWLGASPDGL----LG----- 170
E + D + ++ G ++ + LG+ H+ SPDG LG
Sbjct: 70 FERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSN--------SPDGFCHLTLGYTQQS 121
Query: 171 ----------CFPGGG----ILEVKCPYNKGKPEIALPWSTVPFYYMPQVQGQMEI 212
C+ ++E+K P+N+ ++VP YYMPQ+Q + +
Sbjct: 122 WEIKTIFNDVCYETTKRIPVLVEIKSPFNRKIK------NSVPSYYMPQIQSGLAL 171
>sp|P0CAF0|VF345_ASFK5 Uncharacterized protein D345L OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-121 PE=3 SV=1
Length = 345
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 42/172 (24%)
Query: 69 QRSDEWFALRRDKLTTSTFSTALGFWKGKRRSELWHEKVFSLETQVIENSKRCAMEWGVL 128
QRS+ W A RR ++ S ++ LG K EK + +N A WG L
Sbjct: 14 QRSNAWHATRRTQVGGSDLASVLGLNPYKSYYITLAEKANLFK----KNLNHAACNWGTL 69
Query: 129 NEAAAIDRYK-----SITGHDV----SSLGFAVHAEEQLDWLGASPDGLLGCFPGGGIL- 178
E + D + ++ G ++ + LG+ H+ SPDG C+ G
Sbjct: 70 FERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSN--------SPDGF--CYLTLGYTQ 119
Query: 179 ---EVKCPYN-------KGKP---EIALPW-----STVPFYYMPQVQGQMEI 212
E+K +N K P EI P+ ++VP YY+PQ+Q + +
Sbjct: 120 QSWEIKTIFNDVCYETTKRIPVLVEIKSPFNRKIKNSVPSYYVPQIQSGLAL 171
>sp|Q7VDT0|LEUC_PROMA 3-isopropylmalate dehydratase large subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=leuC PE=3
SV=1
Length = 468
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 28 SAIYRNFSTWSASLISPVASLVVRPPSSLAVVACVTQNDMLQRSDEWFAL 77
SAIY + ++ASLI+P + + P S+A+ A + + L ++D+ AL
Sbjct: 271 SAIYDDEVRFNASLIAPTVTWGITPGQSIAIDASIPTPESLDKNDQQIAL 320
>sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1
Length = 5183
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 8 RCSSIYHQVGRPLSQKRRCGSAIYRNFSTWSA-SLISPVASLVVRPPSSLAVVACVTQND 66
+C IY +G+ +S RR G Y+NF A L++ + ++ P++LA D
Sbjct: 380 KCLEIYDMIGQAISSSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALA--------D 431
Query: 67 MLQRSDEWFALR-RDKLTTS---TFSTALGFWKGKR 98
+ D ALR RD L+ + S LG KG +
Sbjct: 432 KGKEKDPLAALRVRDILSRTKEGVGSPKLGPGKGHQ 467
>sp|Q8KEX7|MURA_CHLTE UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Chlorobium
tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=murA
PE=3 SV=1
Length = 424
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 203 MPQVQGQMEILDREWVDLYCWTPNGSTIFRVIRRRDYWELIHG 245
M Q +G I+DR +++ + P + + I RD W L+HG
Sbjct: 316 MTQARGDSTIIDRIYLERFNHIPELNRLGAHIEIRDNWALVHG 358
>sp|A2AN08|UBR4_MOUSE E3 ubiquitin-protein ligase UBR4 OS=Mus musculus GN=Ubr4 PE=1 SV=1
Length = 5180
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 8 RCSSIYHQVGRPLSQKRRCGSAIYRNFSTWSA-SLISPVASLVVRPPSSLAVVACVTQND 66
+C IY +G+ +S RR G ++NF A L++ + ++ P++LA D
Sbjct: 380 KCLEIYDMIGQAISSSRRAGGEHFQNFQLLGAWCLLNSLFLILNLSPTALA--------D 431
Query: 67 MLQRSDEWFALR-RDKLTTS---TFSTALGFWKGKR 98
+ D ALR RD L+ + S LG KG +
Sbjct: 432 KGKEKDPLAALRVRDILSRTKEGVGSPKLGPGKGHQ 467
>sp|Q2TL32|UBR4_RAT E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus GN=Ubr4 PE=2
SV=2
Length = 5194
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 8 RCSSIYHQVGRPLSQKRRCGSAIYRNFSTWSA-SLISPVASLVVRPPSSLAVVACVTQND 66
+C IY +G+ +S RR G ++NF A L++ + ++ P++LA D
Sbjct: 380 KCLEIYDMIGQAISSSRRAGGEHFQNFQLLGAWCLLNSLFLILHLSPTALA--------D 431
Query: 67 MLQRSDEWFALR-RDKLTTS---TFSTALGFWKGKR 98
+ D ALR RD L+ + S LG KG +
Sbjct: 432 KGKEKDPLAALRVRDILSRTKEGVGSPKLGPGKGHQ 467
>sp|B3QM48|MURA_CHLP8 UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Chlorobaculum
parvum (strain NCIB 8327) GN=murA PE=3 SV=1
Length = 424
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 203 MPQVQGQMEILDREWVDLYCWTPNGSTIFRVIRRRDYWELIHG 245
M Q G I+DR +++ + P + + I RD W L+HG
Sbjct: 316 MTQAHGDSTIIDRIYLERFNHLPELNRLGAHIEIRDNWALVHG 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,003,517
Number of Sequences: 539616
Number of extensions: 4896366
Number of successful extensions: 9278
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9273
Number of HSP's gapped (non-prelim): 14
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)