BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021551
         (311 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8SUE5|YA88_ENCCU Uncharacterized membrane protein ECU10_0880 OS=Encephalitozoon
           cuniculi (strain GB-M1) GN=ECU10_0880 PE=1 SV=1
          Length = 306

 Score = 33.1 bits (74), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 34/199 (17%)

Query: 88  FSPLLKSFTKRADVD-YVMIEQDLEEREDFIASLESRFLFLAADARST-LRGWRPSYRNV 145
           F+ +L+SF K+A+ D YV +E+D  ER+            +  D R T L G     R V
Sbjct: 6   FADVLRSFEKKAEDDEYVSVERDYNERK-----------VIENDVRRTELLGVDKRNRKV 54

Query: 146 LLAVRKNL-----NIPCSSKLSTEDLEAEIFLHLLQEYASEE--SGVF-PGSWENSEASD 197
           +  +++ L      IP        ++ +   L+  Q    EE   GV   GS E S    
Sbjct: 55  IKVLKRLLFVELDKIPIKYTQGMSEIASVFVLYYFQNIVEEEVAKGVLASGSDEES---- 110

Query: 198 AQNSLELGLSQWKVQALAAFNAGAVELKSMMLKGGGIYTLVKIY--QLLMRNLS----GK 251
           A+ S   G S+  ++A    N   VELK  + +      ++ I    +  R L       
Sbjct: 111 AEESAADGFSEQFIEAPEDEN---VELKRFVSRHKDTTAILGIVLTNVFRRKLEPLVVDD 167

Query: 252 FFLEAANYQIKKEVLKKGG 270
           F L   N +I  E++KK G
Sbjct: 168 FKLYKENMRIFVEMMKKKG 186


>sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis
           GN=slc36a4 PE=2 SV=1
          Length = 522

 Score = 32.0 bits (71), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 38  RIGLSTVACTYVALSSKGQGAFDPELRS--VLELATDSELYELERILF 83
            IG++ V   Y++L++ G   F  +++    L L  DS LY+L +IL+
Sbjct: 328 NIGMAIVTTLYISLATLGYFCFGDQIKGSITLNLPQDSWLYQLVKILY 375


>sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo sapiens GN=TDRD6 PE=2 SV=2
          Length = 2096

 Score = 31.6 bits (70), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 18/123 (14%)

Query: 92   LKSFTKRADVDYVMIEQDLEEREDFIASLESRFLFLAADARSTLRGWRPSYRNVLLAVRK 151
            LK  + +A  + + +EQ  +E    +A +  + + +     S  R   P   N+     +
Sbjct: 1729 LKKLSNKAVQNKIYMEQQTDE----LAEITEKDVNIIGTKPSNFRD--PKTDNIC----E 1778

Query: 152  NLNIPCSSKLSTEDLEAEIFLHLLQEYASEE-------SGVFPGSWENSEASDAQNSLEL 204
                PC  K+ TE+LE E+  HL+ +   ++       + + P + E  E  +  NSLE+
Sbjct: 1779 GFENPCKDKIDTEELEGELECHLVDKAEFDDKYLITGFNTLLPHANETKEILEL-NSLEV 1837

Query: 205  GLS 207
             LS
Sbjct: 1838 PLS 1840


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,549,930
Number of Sequences: 539616
Number of extensions: 3865088
Number of successful extensions: 10943
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 10941
Number of HSP's gapped (non-prelim): 8
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)