Query 021551
Match_columns 311
No_of_seqs 72 out of 74
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 05:46:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021551.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021551hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 45.8 2.9 0.00021 33.7 1.0 39 119-157 37-75 (304)
2 d1jz8a5 c.1.8.3 (A:334-625) be 41.6 5.8 0.00042 32.3 2.2 39 118-156 37-75 (292)
3 d2je8a5 c.1.8.3 (A:331-678) Fi 30.1 10 0.00075 30.5 1.9 35 120-155 47-84 (348)
4 d1yq2a5 c.1.8.3 (A:313-609) be 28.5 11 0.00082 30.8 1.9 38 119-156 37-74 (297)
5 d2f96a1 c.55.3.5 (A:19-220) Ri 23.9 20 0.0015 26.4 2.5 32 146-177 158-194 (202)
6 d1o9ra_ a.25.1.1 (A:) Dodecame 22.3 64 0.0047 24.3 5.3 31 105-135 54-84 (162)
7 d1umna_ a.25.1.1 (A:) Dodecame 20.9 69 0.005 23.7 5.2 33 103-135 38-70 (151)
8 d2vzsa5 c.1.8.3 (A:336-674) Ex 19.7 18 0.0013 29.3 1.4 39 119-157 40-78 (339)
9 d1d0qa_ g.41.3.2 (A:) Zinc-bin 19.1 17 0.0013 26.5 1.1 36 123-158 57-97 (102)
10 d2pv4a1 a.286.1.1 (A:1-144) Un 18.4 1E+02 0.0075 24.5 5.8 108 140-263 6-127 (144)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.79 E-value=2.9 Score=33.71 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=29.8
Q ss_pred HHHHHHhhhhhchhhhhcCCCccHHHHHHHHHhhcCCCC
Q 021551 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (311)
Q Consensus 119 ~Ie~rfrfLAADs~s~LRG~gpsYReVLldVc~kLkV~~ 157 (311)
.++..|+.+..=++|++|-++.-+-+.+++.||+++|-.
T Consensus 37 ~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 37 LLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 456666666655589999886667788999999998754
No 2
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=41.59 E-value=5.8 Score=32.27 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=31.4
Q ss_pred HHHHHHHhhhhhchhhhhcCCCccHHHHHHHHHhhcCCC
Q 021551 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (311)
Q Consensus 118 ~~Ie~rfrfLAADs~s~LRG~gpsYReVLldVc~kLkV~ 156 (311)
+.++..|+.+-.=+.|++|-+..-..+-+++.||+++|-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 355677888887779999987666777799999999874
No 3
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=30.13 E-value=10 Score=30.49 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=23.0
Q ss_pred HHHHHhhhhhchhhhhcC---CCccHHHHHHHHHhhcCC
Q 021551 120 LESRFLFLAADARSTLRG---WRPSYRNVLLAVRKNLNI 155 (311)
Q Consensus 120 Ie~rfrfLAADs~s~LRG---~gpsYReVLldVc~kLkV 155 (311)
++..|+.+-.=++|++|- +-|. .+.++|.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p-~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYE-NNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCC-CHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCC-CHHHHHHHHHCCC
Confidence 334455554444788883 2222 6888999999997
No 4
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=28.55 E-value=11 Score=30.83 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=30.5
Q ss_pred HHHHHHhhhhhchhhhhcCCCccHHHHHHHHHhhcCCC
Q 021551 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (311)
Q Consensus 119 ~Ie~rfrfLAADs~s~LRG~gpsYReVLldVc~kLkV~ 156 (311)
.++..|+.+-.=++|++|-+....-+-++|.||++||-
T Consensus 37 ~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gil 74 (297)
T d1yq2a5 37 GAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFW 74 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCE
Confidence 56677888887779999986545667799999999985
No 5
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.87 E-value=20 Score=26.44 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=23.6
Q ss_pred HHHHHhhcCCCCCCC---CCh--HHHHHHHHHHHHhh
Q 021551 146 LLAVRKNLNIPCSSK---LST--EDLEAEIFLHLLQE 177 (311)
Q Consensus 146 LldVc~kLkV~~s~k---lsT--~dLEaEIfLhLL~~ 177 (311)
|-.+|++++|.++.. -.. ...-++||.+++++
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~ 194 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNR 194 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 566899999987553 233 35557899999988
No 6
>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}
Probab=22.28 E-value=64 Score=24.32 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=25.2
Q ss_pred HHhhchHHHHHHHHHHHHHHhhhhhchhhhh
Q 021551 105 MIEQDLEEREDFIASLESRFLFLAADARSTL 135 (311)
Q Consensus 105 ~i~~~~~~R~~~i~~Ie~rfrfLAADs~s~L 135 (311)
..+....+-..+.|.|++|++.+|+.....+
T Consensus 54 ~~~~~~~~~~~~~D~iAERi~~LG~~p~~~~ 84 (162)
T d1o9ra_ 54 LLDTFRTQLDNHGDTIAERVVQLGGTALGSL 84 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCCcCH
Confidence 3666777888999999999999999984333
No 7
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=20.93 E-value=69 Score=23.70 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=26.5
Q ss_pred hhHHhhchHHHHHHHHHHHHHHhhhhhchhhhh
Q 021551 103 YVMIEQDLEEREDFIASLESRFLFLAADARSTL 135 (311)
Q Consensus 103 ~~~i~~~~~~R~~~i~~Ie~rfrfLAADs~s~L 135 (311)
+...+..-++-+.++|.|++|++.+|+.....+
T Consensus 38 H~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~ 70 (151)
T d1umna_ 38 HPKMDEYMEEIDGYLDEMSERLITLGGAPFSTL 70 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCH
Confidence 334777788889999999999999999774443
No 8
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=19.68 E-value=18 Score=29.33 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=28.4
Q ss_pred HHHHHHhhhhhchhhhhcCCCccHHHHHHHHHhhcCCCC
Q 021551 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (311)
Q Consensus 119 ~Ie~rfrfLAADs~s~LRG~gpsYReVLldVc~kLkV~~ 157 (311)
.++..|+.+..=++|++|=++..--+-.++.||++||-.
T Consensus 40 ~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V 78 (339)
T d2vzsa5 40 AAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLT 78 (339)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeE
Confidence 345566666655689999765445678999999999974
No 9
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=19.11 E-value=17 Score=26.48 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=29.0
Q ss_pred HHhhh----hhchhhhhcC-CCccHHHHHHHHHhhcCCCCC
Q 021551 123 RFLFL----AADARSTLRG-WRPSYRNVLLAVRKNLNIPCS 158 (311)
Q Consensus 123 rfrfL----AADs~s~LRG-~gpsYReVLldVc~kLkV~~s 158 (311)
.+.+| ++|.+++++- .+.+|.|.+..++++.+|+-.
T Consensus 57 ~~~Cf~Cg~~Gd~i~fv~~~~~~sf~eAv~~La~~~gi~l~ 97 (102)
T d1d0qa_ 57 IFHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLS 97 (102)
T ss_dssp EEEETTTCCEECHHHHHHHHHTCCHHHHHHHHHHHHTCCCG
T ss_pred heeeehhcccccHHHHHHHHHCcCHHHHHHHHHHHhCCCCC
Confidence 35566 5677788776 599999999999999999854
No 10
>d2pv4a1 a.286.1.1 (A:1-144) Uncharacterized protein Sama2622 {Shewanella amazonensis [TaxId: 60478]}
Probab=18.37 E-value=1e+02 Score=24.46 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=58.4
Q ss_pred ccHHHHH----HHHHhhcCCCCCCCCChHHHH--HHHHHHHHhhhhccccCCCCCCcccCCchhhhhHHH----hh---h
Q 021551 140 PSYRNVL----LAVRKNLNIPCSSKLSTEDLE--AEIFLHLLQEYASEESGVFPGSWENSEASDAQNSLE----LG---L 206 (311)
Q Consensus 140 psYReVL----ldVc~kLkV~~s~klsT~dLE--aEIfLhLL~~~~~~~~~~~~~awek~~~~~e~~sl~----~~---l 206 (311)
+.||++. +.||+ +|=-=.+++.+-+| ++++-.|+++ .-+.+.-+|+-||.+ .+.-|. ++ +
T Consensus 6 ~~y~~~~eqvs~nv~n--~Vi~~d~vPe~l~eay~nm~~el~e~----~e~~~~eaW~sLPaS-Aqnll~~eqFH~~~~a 78 (144)
T d2pv4a1 6 ANYRALAQQVADKVAG--RVIALDRLPESLLTAYRSLCDELLAD----RDGRFTRAWDQLPDS-ASSLFERCVFHGFYLA 78 (144)
T ss_dssp HHHHHHHHHHHHHHHH--TTSCGGGSCHHHHHHHHHHHHHHHHT----TTCHHHHHHHHSCHH-HHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHhh--hhccHhhCcHHHHHHHHHHHHHHHHh----hHHHHHHHHHhCcHH-HHhhchHHHHHHHHHH
Confidence 3566554 55675 34444567788888 8899899987 234555589999987 333221 12 3
Q ss_pred hhHHHHHHhhhhcCchhhhHHHhccccchhHHHHHH-HHHHHHHHHHHHHHhhHHHHH
Q 021551 207 SQWKVQALAAFNAGAVELKSMMLKGGGIYTLVKIYQ-LLMRNLSGKFFLEAANYQIKK 263 (311)
Q Consensus 207 ~~w~~~~la~~~lg~~~lls~lLKGgsalavssi~~-~l~~~la~q~al~~A~YQvAk 263 (311)
++| .+-+++-++ .+..-.-...+.=- ++ -+.-+|+-+-+.+..+ |++|
T Consensus 79 nq~----~~~~~v~qe--~~~~a~~~ee~~e~--e~~~~~~rl~~~~lKd~~K-qLKK 127 (144)
T d2pv4a1 79 NAW----IQLSIVARD--ISELQDTDEAIAEQ--EYSGLYVRVAEAALKESVK-KLKK 127 (144)
T ss_dssp HHH----HHHHHHCCC--HHHHHHTTTTSCHH--HHHHHHHHHHHTHHHHHHH-HHHH
T ss_pred HHH----HHHHHHHHh--ccccccCcHHHHHH--HHHHHHHHHHHHHHHHHHH-HHHH
Confidence 555 222233332 11111111112111 33 5666777777776666 6665
Done!