BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021554
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1
PE=1 SV=1
Length = 154
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 190 SVHLPMQLSQVDP-IVASFSGGAVGV-----ISALMIVEVNNVKQQEQKR-CKYCLGTGY 242
S P +++DP V + S G V I +++N ++E + C C GTG
Sbjct: 36 STSYPRIKAELDPNTVVAISVGVASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGA 95
Query: 243 LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTGM 297
C C +G++ + + GG++ +S C NC G+G + C TC +G+
Sbjct: 96 QKCRLCVGSGNVTV-----ELGGGEKEVS-----NCINCDGAGSLTCTTCQGSGV 140
>sp|P05041|PABB_ECOLI Para-aminobenzoate synthase component 1 OS=Escherichia coli (strain
K12) GN=pabB PE=1 SV=1
Length = 453
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 190 SVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCS 249
+ LP QL D + A+F GG++ + +E+ + + + Q+R +C GYL+ C
Sbjct: 345 TAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIID-ELEPQRRNAWCGSIGYLSF--CG 401
Query: 250 NTGSLVLIEPVSTVNG 265
N + + I ++ +NG
Sbjct: 402 NMDTSITIRTLTAING 417
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 268 QPLSAPKTERCSNCSGSGK------VMCPTCLCTGM 297
+ + P+TERCSNCSG+G CPTC TG
Sbjct: 133 KDIDVPRTERCSNCSGTGARPGTSPKRCPTCGGTGQ 168
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R V ST G Q + +P C CSG+G+V
Sbjct: 158 KRCPTCGGTGQIRTTRTGLGMQFVSTTTCSTCRGKGQVIESP----CPVCSGTGRV 209
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 232 KRCKYCLGTGY---LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM 288
+RC C GTG + RC G I T G + T CS C G G+V+
Sbjct: 141 ERCSNCSGTGARPGTSPKRCPTCGGTGQIRTTRTGLG----MQFVSTTTCSTCRGKGQVI 196
Query: 289 ---CPTCLCTG 296
CP C TG
Sbjct: 197 ESPCPVCSGTG 207
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1
Length = 340
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQP-----LSAPKTERCSNCSGSGK 286
K C C G G C+ C G + T QP S RCS CSG G
Sbjct: 176 KECHKCHGRGRYKCSGCHGAGMVRCSSCSGTKRKAKQPRRCHLCSGSGRRRCSTCSGRGN 235
Query: 287 VMCPTC 292
C TC
Sbjct: 236 KTCATC 241
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)
Query: 219 MIVEVNNVKQQEQKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERC 278
++ E + + + +C C G G + C+ CS T A + RC
Sbjct: 174 LVKECHKCHGRGRYKCSGCHGAGMVRCSSCSGTKR-----------------KAKQPRRC 216
Query: 279 SNCSGSGKVMCPTC 292
CSGSG+ C TC
Sbjct: 217 HLCSGSGRRRCSTC 230
>sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=dnaJ PE=3 SV=2
Length = 379
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 247 RCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNC------SGSGKVMCPTCLCTGMAMA 300
R SN + I V V G LS + E+CS C SGS K MCP C TG
Sbjct: 129 RGSNLRYDLQISFVDAVYGKKAELSYTRNEKCSECHGTGSESGSSKRMCPDCKGTGQVRQ 188
Query: 301 S 301
S
Sbjct: 189 S 189
>sp|Q3U1V8|M3K9_MOUSE Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus
GN=Map3k9 PE=2 SV=2
Length = 1077
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 415 LQDDWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 464
>sp|P80192|M3K9_HUMAN Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens
GN=MAP3K9 PE=1 SV=3
Length = 1104
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 422 LQDNWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 471
>sp|Q03FR6|DNAJ_PEDPA Chaperone protein DnaJ OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=dnaJ PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 226 VKQQEQKRCKYCLGTGY------LACARCSNTGSLVLIEPVSTVNGGDQPLS-APKTERC 278
+K + CK C G+G + C +C+ TG++ + + + PL + + C
Sbjct: 140 IKYSREALCKTCGGSGAKEGTSPVTCHKCNGTGTIQVTQ--------NTPLGRMVRQQTC 191
Query: 279 SNCSGSGKVM---CPTCLCTGMAMASEHDPRI 307
C+G+GK + CPTC TG + +H+ ++
Sbjct: 192 DVCNGTGKEIKEKCPTCGGTGHT-SQQHEVKV 222
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CKYC GTG ++ + + G +V + +G Q + E+C+ C G+GKV
Sbjct: 158 CKYCSGTGQISVEQNTPFGRIVNRQTCRHCSGTGQMIK----EKCTTCHGTGKV 207
>sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
Length = 382
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 268 QPLSAPKTERCSNCSGSGK------VMCPTCLCTGMAMAS 301
+ + P+TERCS CSG+G CPTC TG +
Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPTCGGTGQVRTT 173
>sp|B2G6W4|DNAJ_LACRJ Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 15/80 (18%)
Query: 222 EVNNVKQQEQKRCKYCLGTGY------LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKT 275
+ +K CK C GTG + C RC G + + PL +T
Sbjct: 139 KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQT--------PLGNMQT 190
Query: 276 ER-CSNCSGSGKVMCPTCLC 294
+ C C+G+GK++ P C
Sbjct: 191 QTTCPECNGTGKIIKPEDRC 210
>sp|A5VJE8|DNAJ_LACRD Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 15/80 (18%)
Query: 222 EVNNVKQQEQKRCKYCLGTGY------LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKT 275
+ +K CK C GTG + C RC G + + PL +T
Sbjct: 139 KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQT--------PLGNMQT 190
Query: 276 ER-CSNCSGSGKVMCPTCLC 294
+ C C+G+GK++ P C
Sbjct: 191 QTTCPECNGTGKIIKPEDRC 210
>sp|Q5TCX8|M3KL4_HUMAN Mitogen-activated protein kinase kinase kinase MLK4 OS=Homo sapiens
GN=MLK4 PE=1 SV=1
Length = 1036
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 66 GFCIIEGPE----TVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGI 121
G + E P+ ++QD K+E+Q++ D +R++ ++ EE+ R +QQ+ + EL
Sbjct: 403 GAVMTEMPQESFHSMQDDWKLEIQQMFDELRTKEKELRSREEELTRAALQQKSQE-ELLK 461
Query: 122 SKEEQ 126
+E+Q
Sbjct: 462 RREQQ 466
>sp|Q6HDK8|DNAJ_BACHK Chaperone protein DnaJ OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q634M8|DNAJ_BACCZ Chaperone protein DnaJ OS=Bacillus cereus (strain ZK / E33L)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C1ESK7|DNAJ_BACC3 Chaperone protein DnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|B7JN38|DNAJ_BACC0 Chaperone protein DnaJ OS=Bacillus cereus (strain AH820) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q81LS3|DNAJ_BACAN Chaperone protein DnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C3L5R6|DNAJ_BACAC Chaperone protein DnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C3P8L9|DNAJ_BACAA Chaperone protein DnaJ OS=Bacillus anthracis (strain A0248) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=dnaJ PE=3 SV=1
Length = 376
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 18/64 (28%)
Query: 257 IEPVSTVNG-GDQPLSAPKTERCSNCSGSGKV---------------MCPTCLCTGMAMA 300
+E T +G G +P + P+T CS CSGSG+V CPTC TGM +
Sbjct: 146 LETCETCSGSGAKPGTRPRT--CSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIE 203
Query: 301 SEHD 304
+ D
Sbjct: 204 DKCD 207
>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=dnaJ PE=3 SV=1
Length = 376
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 18/64 (28%)
Query: 257 IEPVSTVNG-GDQPLSAPKTERCSNCSGSGKV---------------MCPTCLCTGMAMA 300
+E T +G G +P + P+T CS CSGSG+V CPTC TGM +
Sbjct: 146 LETCETCSGSGAKPGTRPRT--CSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIE 203
Query: 301 SEHD 304
+ D
Sbjct: 204 DKCD 207
>sp|P0CW06|DNAJ_METMZ Chaperone protein DnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1
Length = 389
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 232 KRCKYCLGTGY---LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM 288
+RC C GTG + RC N G + + G + T CS C G G+V+
Sbjct: 142 ERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTTRSTLG----MQFVSTTTCSACHGRGQVV 197
Query: 289 ---CPTCLCTG 296
CPTC G
Sbjct: 198 ESPCPTCSGAG 208
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 268 QPLSAPKTERCSNCSGSGK------VMCPTCLCTGMAMAS 301
+ + P+TERCS CSG+G CP C TG +
Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTT 173
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R + V S +G Q + +P C CSG+G+V
Sbjct: 159 KRCPNCGGTGQVRTTRSTLGMQFVSTTTCSACHGRGQVVESP----CPTCSGAGRV 210
>sp|P0CW07|DNAJ_METMA Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dnaJ
PE=3 SV=1
Length = 389
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 232 KRCKYCLGTGY---LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM 288
+RC C GTG + RC N G + + G + T CS C G G+V+
Sbjct: 142 ERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTTRSTLG----MQFVSTTTCSACHGRGQVV 197
Query: 289 ---CPTCLCTG 296
CPTC G
Sbjct: 198 ESPCPTCSGAG 208
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 268 QPLSAPKTERCSNCSGSGK------VMCPTCLCTGMAMAS 301
+ + P+TERCS CSG+G CP C TG +
Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTT 173
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R + V S +G Q + +P C CSG+G+V
Sbjct: 159 KRCPNCGGTGQVRTTRSTLGMQFVSTTTCSACHGRGQVVESP----CPTCSGAGRV 210
>sp|Q9KWS6|DNAJ_BACTR Chaperone protein DnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3
SV=1
Length = 380
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 230 EQKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
+++ C YC GTG ++ + + G +V G Q + ERC+ C G+G+V
Sbjct: 161 KKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIK----ERCTTCGGTGRV 214
>sp|Q9Y2M2|SSUH2_HUMAN Protein SSUH2 homolog OS=Homo sapiens GN=SSUH2 PE=1 SV=1
Length = 353
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVMCPT 291
K C C G G C+ C G++ + G + A ++ RC C+GSG+ C T
Sbjct: 153 KECHKCHGRGRYKCSGCHGAGTVR----CPSCCGAKR--KAKQSRRCQLCAGSGRRRCST 206
Query: 292 C 292
C
Sbjct: 207 C 207
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 17/54 (31%)
Query: 266 GDQPLSAPKTERCSNCSGSGKV---------------MCPTCLCTGMAMASEHD 304
G +P + P+T CS CSGSG+V CPTC TGM + + D
Sbjct: 155 GAKPGTRPRT--CSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCD 206
>sp|Q27237|TID_DROME Protein tumorous imaginal discs, mitochondrial OS=Drosophila
melanogaster GN=l(2)tid PE=1 SV=2
Length = 520
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Query: 233 RCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM 288
RC+YC GTG+ + TG V+ G Q + P CS C G G+ +
Sbjct: 243 RCQYCNGTGFETVS----TGPFVMRSTCRYCQGTRQHIKYP----CSECEGKGRTV 290
>sp|Q67S53|DNAJ_SYMTH Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=dnaJ PE=3 SV=1
Length = 386
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 268 QPLSAPKTERCSNCSGSGK------VMCPTCLCTGMAMASEH 303
+ L P+ E C C GSG V CP C TG ++H
Sbjct: 142 KELRVPRVEDCDTCHGSGARPGTQPVTCPKCGGTGQVQMTQH 183
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 209 GGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYL------ACARCSNTGSLVLIEPVST 262
G ++ I A+ E + V+ ++ C CLG+G C CS TG ++
Sbjct: 118 GLSIDFIDAIFGKETD-VEIPKEAECDTCLGSGAKPGSGVDTCKTCSGTGQQEVV----- 171
Query: 263 VNGGDQPLSAPKTER-CSNCSGSGKVM---CPTCLCTG 296
+ P R CS C G GKV+ C TC +G
Sbjct: 172 ---ANTPFGRIVNRRVCSTCEGKGKVVKEKCSTCRGSG 206
>sp|A9VHU0|DNAJ_BACWK Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain
KBAB4) GN=dnaJ PE=3 SV=1
Length = 368
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 160 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQMIK----EKCTTCHGSGKV 209
>sp|B9IY80|DNAJ_BACCQ Chaperone protein DnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3
SV=1
Length = 371
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7HPL2|DNAJ_BACC7 Chaperone protein DnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|Q730M2|DNAJ_BACC1 Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 10987)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7HCT9|DNAJ_BACC4 Chaperone protein DnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7IYG6|DNAJ_BACC2 Chaperone protein DnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 263 VNGGDQPLSAPKTERCSNCSGSGK------VMCPTCLCTGM 297
V GG++ L +TE C +C G+G + CPTC G
Sbjct: 137 VFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQ 177
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 231 QKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSG 285
+K C C GTG + + + G++ P S NG + + +P CS C G+G
Sbjct: 168 KKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESP----CSKCHGTG 218
>sp|B2TLZ8|DNAJ_CLOBB Chaperone protein DnaJ OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=dnaJ PE=3 SV=1
Length = 373
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 263 VNGGDQPLSAPKTERCSNCSGSG------KVMCPTCLCTGMAMASEHDP 305
V G ++ ++ ++E C +C+GSG K CPTC TG P
Sbjct: 130 VFGVEKEITVNRSESCEHCNGSGAEPGTSKKTCPTCSGTGQVRVQRQTP 178
>sp|B2V2I6|DNAJ_CLOBA Chaperone protein DnaJ OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=dnaJ PE=3 SV=1
Length = 373
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 263 VNGGDQPLSAPKTERCSNCSGSG------KVMCPTCLCTGMAMASEHDP 305
V G ++ ++ ++E C +C+GSG K CPTC TG P
Sbjct: 130 VFGVEKEITVNRSESCEHCNGSGAEPGTSKKTCPTCSGTGQVRVQRQTP 178
>sp|P16144|ITB4_HUMAN Integrin beta-4 OS=Homo sapiens GN=ITGB4 PE=1 SV=5
Length = 1822
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 26/103 (25%)
Query: 206 SFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCS------------NTGS 253
SFS G + A +I +V + Q++ R C G C +C +TGS
Sbjct: 439 SFSDGLK--MDAGIICDVCTCELQKEVRSARCSFNGDFVCGQCVCSEGWSGQTCNCSTGS 496
Query: 254 LVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTG 296
L I+P G D+P CSG G+ C C+C G
Sbjct: 497 LSDIQPC-LREGEDKP-----------CSGRGECQCGHCVCYG 527
>sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1198 PE=1 SV=1
Length = 761
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM-CP 290
KR Y L G + C +C TG + P +C C GSGKV+ C
Sbjct: 44 KRATYDLDYGEIPCPKCKGTGKV------------------PVYAKCDFCGGSGKVVKCD 85
Query: 291 TC 292
C
Sbjct: 86 RC 87
>sp|P18187|PHNS_DESFR Periplasmic [NiFe] hydrogenase small subunit OS=Desulfovibrio
fructosovorans GN=hydA PE=1 SV=4
Length = 314
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 47 ESSSFAPSIDAESADKNAAGFCIIE----GPETVQDFAKMELQEIHDNIRS 93
E+S FAPS D+E A K GFC+ E GP T + K+ +++ +++
Sbjct: 244 EASEFAPSFDSEEAKK---GFCLYELGCKGPVTYNNCPKVLFNQVNWPVQA 291
>sp|C4YJE1|ENOPH_CANAW Enolase-phosphatase E1 OS=Candida albicans (strain WO-1) GN=UTR4
PE=3 SV=1
Length = 271
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 84 LQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEE--QDNEL--PSFPS---F 136
L+++ DNI I+ H + + I+ I + G+ ++ ++NEL P + F
Sbjct: 67 LKQLPDNITKSSESIYKHFKNLVDQDIKDPILKSLQGLIWKQGYENNELQAPIYQDSVEF 126
Query: 137 IPFLPPLSAANLKVYYATCFSLIAGVILFGGL 168
I P S+ N K+Y + S+ A ++LFG +
Sbjct: 127 IESFPTKSSTNNKIYIYSSGSIKAQILLFGHV 158
>sp|Q6NEZ1|DNAJ2_CORDI Chaperone protein DnaJ 2 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ2 PE=3
SV=1
Length = 390
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 19/72 (26%)
Query: 234 CKYCLGTGY-----LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVM 288
C C G+G C C+ TG ++ N G SAP C+ C G+GK++
Sbjct: 174 CHTCHGSGSRSGAPTTCTECNGTG-------FTSENKGAFGFSAP----CTQCGGTGKMI 222
Query: 289 ---CPTCLCTGM 297
CP C TG
Sbjct: 223 SDPCPDCSGTGT 234
>sp|C4L424|DNAJ_EXISA Chaperone protein DnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283
/ AT1b) GN=dnaJ PE=3 SV=1
Length = 368
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 16/72 (22%)
Query: 234 CKYCLGTGYL------ACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
C C+G+G C RC +G V TV CS C GSGK
Sbjct: 139 CDTCMGSGAKPGTKPETCNRCGGSG-------VETVEQNTILGRMVNQRPCSQCHGSGKT 191
Query: 288 M---CPTCLCTG 296
+ CPTC +G
Sbjct: 192 IKEKCPTCHGSG 203
>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 257 IEPVSTVNGGDQPLSAPKTERCSNCSGSGKV------MCPTCLCTGMAMASEHDP 305
+E + + GGD+ L+ E C C+GSG C TC TG + P
Sbjct: 124 LEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRATRTP 178
>sp|C5D4U0|DNAJ_GEOSW Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ
PE=3 SV=1
Length = 380
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 230 EQKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
+++ C YC GTG ++ + + G +V G Q + E+C+ C G+G+V
Sbjct: 161 KKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIK----EKCTTCGGTGRV 214
>sp|Q5AM80|ENOPH_CANAL Enolase-phosphatase E1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=UTR4 PE=3 SV=1
Length = 265
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 84 LQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEE--QDNEL--PSFPSFIPF 139
L+++ DNI I+ H + + I+ I + G+ ++ + NEL P + I F
Sbjct: 67 LKQLPDNITKSSESIYKHFKNLVDQDIKDPILKSLQGLIWKQGYEKNELQAPIYQDSIEF 126
Query: 140 L---PPLSAANLKVYYATCFSLIAGVILFGGL 168
+ P S+ N K+Y + S+ A ++LFG +
Sbjct: 127 IESFPTKSSTNNKIYIYSSGSIKAQILLFGHV 158
>sp|O88943|KCNQ2_RAT Potassium voltage-gated channel subfamily KQT member 2 OS=Rattus
norvegicus GN=Kcnq2 PE=2 SV=1
Length = 852
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 25 YHGGN---SRFRRLNSNWRCRASEP-----ESSSFAPSIDAESADKNAAGFCIIEGPETV 76
Y GGN + F RL CR SE ++S PS+D E +++ +GF I + E +
Sbjct: 735 YSGGNRASTEFLRLEGTPACRPSEAALRDSDTSISIPSVDHEELERSFSGFSISQSKENL 794
Query: 77 QDFA 80
A
Sbjct: 795 NALA 798
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,326,993
Number of Sequences: 539616
Number of extensions: 4776356
Number of successful extensions: 13857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 13691
Number of HSP's gapped (non-prelim): 171
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)