Query 021558
Match_columns 311
No_of_seqs 161 out of 607
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 05:52:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x6v_B Bifunctional 3'-phospho 100.0 7.1E-83 2.4E-87 655.4 27.5 254 54-311 225-481 (630)
2 1r6x_A ATP:sulfate adenylyltra 100.0 1.1E-82 3.6E-87 623.1 24.6 243 55-310 2-248 (395)
3 1g8f_A Sulfate adenylyltransfe 100.0 1.4E-80 4.9E-85 625.4 24.8 245 53-310 1-249 (511)
4 1jhd_A Sulfate adenylyltransfe 100.0 4.3E-80 1.5E-84 605.3 15.7 247 53-311 1-255 (396)
5 1m8p_A Sulfate adenylyltransfe 100.0 6.5E-79 2.2E-83 619.7 23.5 246 53-310 2-251 (573)
6 2gks_A Bifunctional SAT/APS ki 100.0 3.1E-74 1.1E-78 582.3 23.3 224 76-311 2-225 (546)
7 1v47_A ATP sulfurylase; produc 100.0 2.3E-72 7.8E-77 542.9 22.2 214 79-311 3-216 (349)
8 3cr8_A Sulfate adenylyltranfer 100.0 3.1E-72 1.1E-76 569.0 20.8 222 51-310 3-224 (552)
9 1qjc_A Phosphopantetheine aden 95.9 0.016 5.3E-07 48.0 6.8 51 251-308 9-59 (158)
10 1od6_A PPAT, phosphopantethein 95.4 0.02 6.8E-07 47.6 5.5 55 247-308 4-60 (160)
11 3nv7_A Phosphopantetheine aden 94.7 0.067 2.3E-06 45.7 6.7 51 251-308 10-60 (157)
12 1vlh_A Phosphopantetheine aden 94.3 0.085 2.9E-06 45.1 6.7 51 251-308 20-70 (173)
13 1o6b_A Phosphopantetheine aden 94.0 0.17 5.7E-06 42.5 7.7 56 246-308 5-60 (169)
14 3nd5_A Phosphopantetheine aden 93.6 0.14 4.7E-06 44.3 6.6 52 251-309 10-61 (171)
15 1f9a_A Hypothetical protein MJ 93.5 0.11 3.7E-06 43.9 5.8 52 251-309 8-62 (168)
16 3f3m_A Phosphopantetheine aden 93.4 0.14 4.6E-06 44.1 6.2 57 245-308 4-61 (168)
17 4f3r_A Phosphopantetheine aden 92.7 0.15 5.2E-06 43.5 5.4 55 246-307 7-62 (162)
18 3nbk_A Phosphopantetheine aden 92.6 0.29 9.8E-06 42.8 7.2 52 250-308 28-79 (177)
19 1ej2_A Nicotinamide mononucleo 92.5 0.31 1E-05 41.6 7.1 56 246-308 6-64 (181)
20 1kam_A Deamido-NAD(+), nicotin 92.0 0.24 8.1E-06 42.6 5.8 59 246-309 10-71 (194)
21 2qtr_A Nicotinate (nicotinamid 91.8 0.28 9.7E-06 41.6 6.1 54 250-308 9-65 (189)
22 3k9w_A Phosphopantetheine aden 90.8 0.55 1.9E-05 41.0 7.0 58 244-308 23-80 (187)
23 1k4m_A NAMN adenylyltransferas 90.2 0.91 3.1E-05 39.5 7.9 58 247-309 7-66 (213)
24 1lw7_A Transcriptional regulat 90.1 0.35 1.2E-05 45.3 5.6 57 246-309 4-71 (365)
25 3do8_A Phosphopantetheine aden 89.9 0.41 1.4E-05 40.2 5.2 53 251-309 8-65 (148)
26 2qjt_B Nicotinamide-nucleotide 89.9 0.37 1.3E-05 44.4 5.5 56 246-308 9-68 (352)
27 3h05_A Uncharacterized protein 88.9 0.48 1.6E-05 40.9 5.0 57 245-309 3-61 (177)
28 1yum_A 'probable nicotinate-nu 88.9 0.95 3.2E-05 40.7 7.2 60 244-308 23-85 (242)
29 1nup_A FKSG76; NAD biosynthesi 88.0 1.1 3.9E-05 40.3 7.1 59 251-309 14-74 (252)
30 2h29_A Probable nicotinate-nuc 87.5 1.4 4.9E-05 37.4 7.2 55 250-309 9-66 (189)
31 2b7l_A Glycerol-3-phosphate cy 82.9 3.1 0.00011 33.1 6.7 54 245-305 3-61 (132)
32 1kqn_A Nmnat, nicotinamide mon 82.3 2.5 8.5E-05 38.9 6.6 58 251-308 16-75 (279)
33 1coz_A Protein (glycerol-3-pho 79.9 2.9 9.8E-05 33.1 5.4 53 246-305 4-61 (129)
34 2qjo_A Bifunctional NMN adenyl 79.7 1.6 5.5E-05 39.7 4.4 53 248-307 12-67 (341)
35 3glv_A Lipopolysaccharide core 76.6 2.4 8.2E-05 34.7 4.1 55 244-305 3-62 (143)
36 3uk2_A Pantothenate synthetase 76.5 0.52 1.8E-05 44.2 0.0 57 228-295 8-69 (283)
37 3n8h_A Pantothenate synthetase 75.1 5.6 0.00019 36.9 6.5 39 228-266 7-46 (264)
38 2x0k_A Riboflavin biosynthesis 72.3 4.7 0.00016 38.2 5.5 59 245-305 17-83 (338)
39 3inn_A Pantothenate synthetase 66.0 11 0.00037 35.8 6.5 40 227-266 24-65 (314)
40 3gmi_A UPF0348 protein MJ0951; 65.6 6.2 0.00021 37.9 4.8 25 242-266 51-75 (357)
41 1mrz_A Riboflavin kinase/FMN a 61.7 12 0.00041 34.7 5.8 58 246-305 2-65 (293)
42 3v67_A Sensor protein CPXA; PA 56.6 8 0.00027 32.2 3.3 56 151-215 54-111 (138)
43 1v8f_A Pantoate-beta-alanine l 54.9 16 0.00056 33.8 5.5 35 228-266 4-39 (276)
44 3q12_A Pantoate--beta-alanine 53.2 17 0.00057 34.1 5.2 38 228-265 7-46 (287)
45 2ejc_A Pantoate--beta-alanine 51.3 30 0.001 32.0 6.7 38 229-266 5-44 (280)
46 3ag6_A Pantothenate synthetase 48.9 29 0.001 32.2 6.1 38 228-265 5-44 (283)
47 3hl4_A Choline-phosphate cytid 47.6 12 0.0004 34.1 3.2 75 227-306 60-139 (236)
48 3mxt_A Pantothenate synthetase 43.8 24 0.00082 33.0 4.7 39 228-266 7-47 (285)
49 1xvq_A Thiol peroxidase; thior 41.3 54 0.0018 26.5 6.1 57 134-190 100-168 (175)
50 2ts1_A Tyrosyl-tRNA synthetase 37.9 1.1E+02 0.0037 29.7 8.6 44 230-274 18-62 (419)
51 3elb_A Ethanolamine-phosphate 35.3 54 0.0018 31.0 5.8 56 244-306 8-68 (341)
52 2yxn_A Tyrosyl-tRNA synthetase 33.4 1.2E+02 0.0042 28.0 7.9 43 231-274 22-65 (322)
53 1jil_A Tyrrs, tyrosyl-tRNA syn 29.4 2.4E+02 0.0084 27.1 9.5 44 230-274 20-64 (420)
54 3gl3_A Putative thiol:disulfid 29.3 1.1E+02 0.0036 23.3 5.8 62 134-195 86-150 (152)
55 3jtf_A Magnesium and cobalt ef 29.3 29 0.001 26.4 2.4 22 153-174 100-121 (129)
56 1n8j_A AHPC, alkyl hydroperoxi 29.3 1.2E+02 0.004 24.9 6.4 39 133-171 91-137 (186)
57 2jan_A Tyrosyl-tRNA synthetase 29.3 1.4E+02 0.0048 29.1 7.7 45 229-274 19-64 (432)
58 3op1_A Macrolide-efflux protei 28.0 29 0.00099 32.5 2.5 61 244-306 21-91 (308)
59 4g2e_A Peroxiredoxin; redox pr 26.9 1.2E+02 0.004 24.1 5.8 40 134-173 88-140 (157)
60 2pn8_A Peroxiredoxin-4; thiore 24.6 1.7E+02 0.006 24.5 6.8 37 133-169 112-156 (211)
61 2ki8_A Tungsten formylmethanof 24.6 96 0.0033 25.3 4.9 31 139-169 55-87 (146)
62 3nqr_A Magnesium and cobalt ef 24.5 23 0.0008 26.9 1.0 23 152-174 99-121 (127)
63 1t62_A Conserved hypothetical 24.4 56 0.0019 28.1 3.5 27 150-176 67-93 (166)
64 2cyc_A Tyrosyl-tRNA synthetase 24.2 1.5E+02 0.0051 28.2 6.8 71 229-302 19-94 (375)
65 3ctu_A CBS domain protein; str 24.0 77 0.0026 24.6 4.1 30 146-175 109-138 (156)
66 1y42_X Tyrosyl-tRNA synthetase 24.0 1.7E+02 0.0057 28.1 7.2 43 231-274 53-96 (392)
67 2c0d_A Thioredoxin peroxidase 24.0 1.9E+02 0.0064 24.7 6.9 37 134-170 121-164 (221)
68 3kcm_A Thioredoxin family prot 23.8 1.4E+02 0.0049 22.6 5.6 41 134-174 87-129 (154)
69 4gqo_A LMO0859 protein; virule 23.7 1.2E+02 0.0042 27.5 6.0 67 77-149 82-161 (433)
70 3a2v_A Probable peroxiredoxin; 23.3 1.9E+02 0.0065 25.6 7.0 99 133-248 96-209 (249)
71 2lrn_A Thiol:disulfide interch 22.7 1.6E+02 0.0055 22.5 5.8 57 135-195 88-149 (152)
72 3qpm_A Peroxiredoxin; oxidored 22.6 1.6E+02 0.0055 25.5 6.3 39 133-171 141-187 (240)
73 3gkn_A Bacterioferritin comigr 22.5 2.4E+02 0.008 21.8 6.8 35 134-168 93-141 (163)
74 1psq_A Probable thiol peroxida 22.4 1.8E+02 0.006 22.9 6.0 41 135-175 100-149 (163)
75 2bmx_A Alkyl hydroperoxidase C 22.0 1.9E+02 0.0064 23.5 6.3 47 133-179 106-159 (195)
76 3ixr_A Bacterioferritin comigr 21.7 1.6E+02 0.0055 23.8 5.8 35 134-168 109-157 (179)
77 3k6e_A CBS domain protein; str 21.5 57 0.002 26.2 2.9 29 146-174 109-137 (156)
78 3p7x_A Probable thiol peroxida 21.0 2.2E+02 0.0076 22.3 6.4 42 134-175 102-152 (166)
79 3tjj_A Peroxiredoxin-4; thiore 20.8 2E+02 0.0068 25.3 6.6 47 133-179 155-209 (254)
80 1we0_A Alkyl hydroperoxide red 20.5 1.5E+02 0.0053 23.8 5.4 39 133-171 92-138 (187)
81 3elb_A Ethanolamine-phosphate 20.0 77 0.0026 30.0 3.8 50 250-306 205-263 (341)
No 1
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=100.00 E-value=7.1e-83 Score=655.39 Aligned_cols=254 Identities=54% Similarity=0.937 Sum_probs=242.4
Q ss_pred cCCCCCc--eeecccCchhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCee
Q 021558 54 IEPDGGK--LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (311)
Q Consensus 54 i~PhGg~--Lv~l~v~~~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (311)
+.||||+ |++|+|+++++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||..+
T Consensus 225 ~ip~G~~~~l~~l~v~~~~~~~~~~~a~~l~~i~l~~~~~~dlell~~G~fsPL~GfM~~~dy~~v~--~~~~l~~g~~~ 302 (630)
T 1x6v_B 225 IVPVDASYEVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCL--HFDCLLDGGVI 302 (630)
T ss_dssp SSCCCCCCSCCCCBCCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCSSCCHHHHHHHH--HHSEECTTSCE
T ss_pred cccccCcccceecccChHHHHHHHHhhccCCEEEECHHHHHHHHHHhcCCccCchhhCCHHHHHHHH--HhCEeCCCCee
Confidence 5799966 9999999999999999999999999999999999999999999999999999999999 59999997533
Q ss_pred ecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeee
Q 021558 132 NMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGD 211 (311)
Q Consensus 132 ~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~ 211 (311)
+|||||||+|+++++++|++|++|+| +.+|+++|+|+|+|+|++||++||++||||+|++||||++++ ++|+|+|||+
T Consensus 303 ~~~iPi~L~v~~~~~~~l~~g~~v~L-~~~g~~~a~l~v~e~~~~dk~~~a~~v~gt~d~~HPgv~~~~-~~g~~~vgG~ 380 (630)
T 1x6v_B 303 NLSVPIVLTATHEDKERLDGCTAFAL-MYEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKMVM-EQGDWLIGGD 380 (630)
T ss_dssp ECCSCCCEEECHHHHHHHTTCSEEEE-EETTEEEEEEEEEEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HSCSEEEEEE
T ss_pred eeeeEEEEeCCHHHHhhCCCCCEEEE-ccCCeEEEEEEeeEEEecCHHHHHHHHhCCCCCCCcchHHHH-hCCCEEEEeE
Confidence 49999999999999999999999999 569999999999999999999999999999999999999976 5699999999
Q ss_pred EEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCC
Q 021558 212 LEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKA 291 (311)
Q Consensus 212 v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~ 291 (311)
|++++++.|+|+|++||+||+|+|+.|+++||++|||||||||+|||||+|||.|++.+.+.||++++||||||||+||+
T Consensus 381 i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~gw~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~tk~ 460 (630)
T 1x6v_B 381 LQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKD 460 (630)
T ss_dssp EEECSCCCCCSSCGGGCCCHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCCT
T ss_pred EEEEecCcccccchhhcCCHHHHHHHHHHcCCCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCCCCC
Confidence 99999999998999999999999999999999999999999999999999999887777788899999999999999999
Q ss_pred CCCChHHHHHHHHHHHH-hhC
Q 021558 292 DDVPLSWRMKQHEKVLR-LTF 311 (311)
Q Consensus 292 dDvp~~vR~r~ye~ll~-ny~ 311 (311)
||||+++||+||+++++ |||
T Consensus 461 ~di~~~~r~~~~~~~~~~~y~ 481 (630)
T 1x6v_B 461 DDVPLMWRMKQHAAVLEEGVL 481 (630)
T ss_dssp TSCCHHHHHHHHHHHHHTTSS
T ss_pred CCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999 786
No 2
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=1.1e-82 Score=623.07 Aligned_cols=243 Identities=32% Similarity=0.522 Sum_probs=230.3
Q ss_pred CCCCCceeecccCchh-HHHHHHHhcc--CCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCee
Q 021558 55 EPDGGKLTELIVDKSL-RDVRKREAAT--LPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (311)
Q Consensus 55 ~PhGg~Lv~l~v~~~~-~~~l~~ea~~--lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (311)
.||||+|+||+|++++ +++++++|++ ||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 2 ~phgg~l~~l~v~~~~~~~~~~~~a~~~~lp~i~l~~~~l~dlell~~G~fsPL~GFM~~~dy~~V~--~~~rL~dG~~- 78 (395)
T 1r6x_A 2 APHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGTL- 78 (395)
T ss_dssp CCTTSSCCBHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHBTTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred cCCCccccccccCchHHhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 5999999999998654 5669999999 99999999999999999999999999999999999999 5999999987
Q ss_pred ecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeee
Q 021558 132 NMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGD 211 (311)
Q Consensus 132 ~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~ 211 (311)
|||||||+|+++++++|++|++|+|+|.+|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+
T Consensus 79 -wpiPI~L~v~~e~~~~l~~g~~vaL~~~~g~~~ail~v~e~y~~dk~~~a~~vfg-~d~~HPgV~~~~~~~g~~~vgG~ 156 (395)
T 1r6x_A 79 -WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAEKVFR-GDPEHPAISYLFNVAGDYYVGGS 156 (395)
T ss_dssp -CCSCCCEEECHHHHHTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEEEE
T ss_pred -cceEEEEeCCHHHHhhcCCCCEEEEEcCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhcCCEEEEEE
Confidence 8999999999999999999999999888999999999999999999999999999 99999999997755699999999
Q ss_pred EEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchH-HHHHHHHHHHHHHhcCCCCcEEEecccCCCC
Q 021558 212 LEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGH-ALLMTDTRRRLLEMGYQNPILLLHPLGGYTK 290 (311)
Q Consensus 212 v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaH-e~L~k~~~~~ale~~~~~~~LllhPLvG~tK 290 (311)
|++++++.|+ +|++||+||+|+|+.|+++||++|||||||||+|||| |++++ +|+|. +++||||||+|+||
T Consensus 157 v~~l~~~~~~-df~~~r~tP~e~R~~f~~~gw~~VvafqtrNP~HraH~e~~~r----~a~e~---~~~lllhPlvG~tK 228 (395)
T 1r6x_A 157 LEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVR----AAREA---NAKVLIHPVVGLTK 228 (395)
T ss_dssp EEESCCCCCC-SSTTCSCCHHHHHHHHHHTTCCCEEEECCSSCCCHHHHHHHHH----HHHHT---TCEEEECCBCSBCC
T ss_pred EEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCcEEEeccCCCcchhhHHHHHH----HHHHc---CCcEEEEECCCCCC
Confidence 9999998887 5999999999999999999999999999999999999 77765 67786 48999999999999
Q ss_pred CCCCChHHHHHHHHHHHHhh
Q 021558 291 ADDVPLSWRMKQHEKVLRLT 310 (311)
Q Consensus 291 ~dDvp~~vR~r~ye~ll~ny 310 (311)
+||||+++||+||+++++||
T Consensus 229 ~~Dip~~vR~~~~~~~l~~y 248 (395)
T 1r6x_A 229 PGDIDHHTRVRVYQEIIKRY 248 (395)
T ss_dssp TTCCCHHHHHHHHHHHGGGS
T ss_pred CCCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999998
No 3
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=100.00 E-value=1.4e-80 Score=625.43 Aligned_cols=245 Identities=31% Similarity=0.513 Sum_probs=231.1
Q ss_pred ccCCCCCceeecccCch-hHHHHHHHhcc--CCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCC
Q 021558 53 LIEPDGGKLTELIVDKS-LRDVRKREAAT--LPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGS 129 (311)
Q Consensus 53 li~PhGg~Lv~l~v~~~-~~~~l~~ea~~--lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~ 129 (311)
|+.||||+|+||+++++ ++++++++|++ ||+|.||++++||||||++||||||+||||++||+||+ ++|||+||+
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~a~~~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~ 78 (511)
T 1g8f_A 1 MPAPHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGT 78 (511)
T ss_dssp -CCCTTSSCCCHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTCC
T ss_pred CCCCCCCeeeccccCchhhhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCC
Confidence 56899999999998765 45669999999 99999999999999999999999999999999999999 599999998
Q ss_pred eeecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEe
Q 021558 130 VVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIG 209 (311)
Q Consensus 130 ~~~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vg 209 (311)
+ |||||||+|+++++++|++|++|+|+|.+|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+||
T Consensus 79 ~--w~iPi~L~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~d~~HPgv~~~~~~~g~~~v~ 155 (511)
T 1g8f_A 79 L--WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAERVFR-GDPEHPAISYLFNVAGDYYVG 155 (511)
T ss_dssp B--CCSCCCEEECHHHHTTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEE
T ss_pred C--cceeEEEeCCHHHHhhccCCCEEEEECCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhCCCEEEE
Confidence 7 8999999999999999999999999988999999999999999999999999999 999999999977555999999
Q ss_pred eeEEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchH-HHHHHHHHHHHHHhcCCCCcEEEecccCC
Q 021558 210 GDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGH-ALLMTDTRRRLLEMGYQNPILLLHPLGGY 288 (311)
Q Consensus 210 G~v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaH-e~L~k~~~~~ale~~~~~~~LllhPLvG~ 288 (311)
|+|++++++.|+ +|++||+||+|+|+.|+++||++|||||||||+|||| |++++ +|+|. +++||||||+|+
T Consensus 156 G~v~~l~~~~~~-~~~~~~~tP~e~r~~f~~~gw~~v~afqtrnP~HraH~e~~~~----~a~e~---~~~lll~pl~g~ 227 (511)
T 1g8f_A 156 GSLEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVR----AAREA---NAKVLIHPVVGL 227 (511)
T ss_dssp EEEEESCCCCCC-SCTTTCCCHHHHHHHHHHTTCCCEEEEEESSCCCHHHHHHHHH----HHHHH---TCEEEEEEBCSB
T ss_pred EEEEEEecCCcC-CchhhcCCHHHHHHHHHHcCCCcEEEEecCCCCchHHHHHHHH----HHHHc---CCcEEEEECCCC
Confidence 999999998887 5999999999999999999999999999999999999 77765 67786 489999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHhh
Q 021558 289 TKADDVPLSWRMKQHEKVLRLT 310 (311)
Q Consensus 289 tK~dDvp~~vR~r~ye~ll~ny 310 (311)
||+||||+++||+||+++++||
T Consensus 228 ~k~~di~~~~r~~~~~~~~~~y 249 (511)
T 1g8f_A 228 TKPGDIDHHTRVRVYQEIIKRY 249 (511)
T ss_dssp CSTTCCCHHHHHHHHHHHGGGS
T ss_pred CCCCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999998
No 4
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=4.3e-80 Score=605.29 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=233.8
Q ss_pred ccCCCCCceeeccc--CchhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCe
Q 021558 53 LIEPDGGKLTELIV--DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSV 130 (311)
Q Consensus 53 li~PhGg~Lv~l~v--~~~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~ 130 (311)
++.||||+|+||++ +++++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~~a~~lp~i~l~~~~~~dlell~~G~fsPL~GFM~~~d~~~v~--~~~rl~~G~~ 78 (396)
T 1jhd_A 1 MIKPVGSDELKPLFVYDPEEHHKLSHEAESLPSVVISSQAAGNAVMMGAGYFSPLQGFMNVADAMGAA--EKMTLSDGSF 78 (396)
T ss_dssp CCCCTTSSSCCCCBCCSHHHHHHHHHHHTTSCEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTSCB
T ss_pred CCCCCCCeeeccccCCChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 46899999999999 9999999999999999999999999999999999999999999999999999 5999999988
Q ss_pred eecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHH------HhhCCCCCCChhHHHHHHhcC
Q 021558 131 VNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIA------RTWGTTAPGLPYVDQAITYAG 204 (311)
Q Consensus 131 ~~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~------~VfGT~d~~HPgV~~~~~~~g 204 (311)
|||||||+|++ +++|++|++|+|+|.+|+++|+|+|+|+|++||++||+ +||||+|++||||++++ +.|
T Consensus 79 --wpiPi~L~v~~--~~~l~~g~~v~L~d~~g~~~a~l~v~e~~~~dk~~~a~~~~~~~~v~gt~d~~HPgv~~~~-~~g 153 (396)
T 1jhd_A 79 --FPVPVLCLLEN--TDAIGDAKRIALRDPNVEGNPVLAVMDIEAIEEVSDEQMAVMTDKVYRTTDMDHIGVKTFN-SQG 153 (396)
T ss_dssp --CCSCCCCEESC--STTTTTCSEEEEECTTSTTCCEEEEEECCEEEECCHHHHHHHHHHHHSCCCTTSHHHHHHT-TSC
T ss_pred --ccEEEEEecch--hhhCCCCCEEEEECCCCceEEEEEeeeeeccChHHHhhhhcccccEECCCCCCCcchHHHh-hcC
Confidence 89999999987 78899999999998899999999999999999999999 99999999999999965 789
Q ss_pred CEEEeeeEEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEec
Q 021558 205 NWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHP 284 (311)
Q Consensus 205 ~~~vgG~v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhP 284 (311)
+|+|||+|++++++.|+++|++||+||+|+|+.|+++||++|||||||||+||||++|++ +|++.. +.|+|+|||
T Consensus 154 ~~~vgG~v~~l~~~~~~~~~~~~~~tP~e~R~~f~~~gw~~VvafqTrNPiHrgH~~l~~----~Ale~~-~~D~vll~P 228 (396)
T 1jhd_A 154 RVAVSGPIQVLNFSYFQADFPDTFRTAVEIRNEIKEHGWSKVVAFQTRNPMHRAHEELCR----MAMESL-DADGVVVHM 228 (396)
T ss_dssp SEEEEEEEEECCCHHHHHHCTTTBCCHHHHHHHHHHHTCSSEEEEEESSCCCHHHHHHHH----HHHHHH-TCSEEEEEE
T ss_pred CEEEEEEEEEEecccccccchhhcCCHHHHHHHHHhcCCceEEEeccCCCCchHHHHHHH----HHHHHc-CCCeEEEEE
Confidence 999999999999988877899999999999999999999999999999999999999997 455542 136899999
Q ss_pred ccCCCCCCCCChHHHHHHHHHHHHhhC
Q 021558 285 LGGYTKADDVPLSWRMKQHEKVLRLTF 311 (311)
Q Consensus 285 LvG~tK~dDvp~~vR~r~ye~ll~ny~ 311 (311)
++|++|+||+|+++|++||++++++||
T Consensus 229 ~~g~~K~~di~~~~R~~~~~~~~~~~~ 255 (396)
T 1jhd_A 229 LLGKLKKGDIPAPVRDAAIRTMAEVYF 255 (396)
T ss_dssp EECCCCTTCCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999984
No 5
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=100.00 E-value=6.5e-79 Score=619.73 Aligned_cols=246 Identities=30% Similarity=0.445 Sum_probs=234.1
Q ss_pred ccCCCCCceeecccCc-hhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCee
Q 021558 53 LIEPDGGKLTELIVDK-SLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (311)
Q Consensus 53 li~PhGg~Lv~l~v~~-~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (311)
|+.||||+|++|+|++ +++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 2 ~~~phgg~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~- 78 (573)
T 1m8p_A 2 ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVC--EDNRLADGNV- 78 (573)
T ss_dssp CSCCSTTSCCCHHHHTSTTHHHHHHHHTTSCEEEECHHHHHHHHHHHTSTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred CCCCCCCcccccccCchHHHHHHHHHhccCCeEEeCHHHHHHHHHHhcCCcCCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 6789999999999988 89999999999999999999999999999999999999999999999999 5999999987
Q ss_pred ecceeeEEecCHHHHHhc--CCCCeEEEeC-CCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEE
Q 021558 132 NMSVPIVLAIDDEQKRRI--GESTRVALVD-SDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLI 208 (311)
Q Consensus 132 ~~piPIvL~v~~e~a~~l--~~g~~vaL~~-~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~v 208 (311)
|||||||+|+++++++| ++|++|+|+| ++|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|
T Consensus 79 -~~~Pi~l~v~~~~~~~l~~~~g~~v~L~~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~~~~hP~v~~~~~~~g~~~v 156 (573)
T 1m8p_A 79 -FSMPITLDASQEVIDEKKLQAASRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFG-GDPEHPAIVYLNNTVKEFYI 156 (573)
T ss_dssp -CCSCCCCEECHHHHHHTTCCTTCEEEEEETTTTEEEEEEEESCCCCCCHHHHHHHTSC-CCSSTHHHHHHHHTSCSEEC
T ss_pred -cceeEEEeCCHHHHHhhccCCCCEEEEEecCCCeEEEEEEeeeeecCCHHHHHHHHhC-CCCCCccHHHHHhccCCEEE
Confidence 89999999999999999 9999999998 8999999999999999999999999999 99999999998755599999
Q ss_pred eeeEEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCC
Q 021558 209 GGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY 288 (311)
Q Consensus 209 gG~v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~ 288 (311)
||+|++++++.|+ +|++||+||+|+|+.|+++||++|||||||||+|||||+|++. +|.+. +++||||||+|+
T Consensus 157 ~G~~~~l~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~---a~~~~---~~~llv~pl~g~ 229 (573)
T 1m8p_A 157 GGKIEAVNKLNHY-DYVALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVR---AARSR---QANVLIHPVVGL 229 (573)
T ss_dssp CEEEEECCCCCCC-SCGGGBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHHH---HHHHT---TCEEEECCBCCC
T ss_pred EEEEEEEecCCcc-CcHhhcCCHHHHHHHHHHcCCCeEEEEeeCCCcchhhHHHHHH---HHHhc---CCcEEEEeCCCC
Confidence 9999999998887 5999999999999999999999999999999999999999863 45454 489999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHhh
Q 021558 289 TKADDVPLSWRMKQHEKVLRLT 310 (311)
Q Consensus 289 tK~dDvp~~vR~r~ye~ll~ny 310 (311)
||+||||+++|++||++++++|
T Consensus 230 ~k~~di~~~~R~~~~~~~~~~~ 251 (573)
T 1m8p_A 230 TKPGDIDHFTRVRAYQALLPRY 251 (573)
T ss_dssp CCTTCHHHHHHHHHHHHHGGGS
T ss_pred CCCCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999997
No 6
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=100.00 E-value=3.1e-74 Score=582.25 Aligned_cols=224 Identities=29% Similarity=0.483 Sum_probs=212.0
Q ss_pred HHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCeeecceeeEEecCHHHHHhcCCCCeE
Q 021558 76 REAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRV 155 (311)
Q Consensus 76 ~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~~~piPIvL~v~~e~a~~l~~g~~v 155 (311)
++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++ |||||||+|+++++++|++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~--~~~Pi~l~v~~~~~~~l~~g~~v 77 (546)
T 2gks_A 2 EKIKYLKSIQISQRSVLDLELLAVGAFTPLDRFMGEEDYRNVV--ESMRLKSGTL--FPIPITLPMEKEIAKDLKEGEWI 77 (546)
T ss_dssp --CCSSEEEECCHHHHHHHHHHHTTTTTTCCSSCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEECHHHHTTCCTTCEE
T ss_pred cccccCCeEecCHHHHHHHHHHhcCCcCCccccCCHHHHHHHH--HhCcCCCCCC--cceeEEEeCCHHHHhhcCCCCEE
Confidence 5789999999999999999999999999999999999999999 5899999987 89999999999999999999999
Q ss_pred EEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeeeEEEeccCCCCCCCccccCCHHHHH
Q 021558 156 ALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLR 235 (311)
Q Consensus 156 aL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~d~f~~~rltP~e~R 235 (311)
+|+|.+|+++|+|+|+|+|++||++||++||||+|++||||++++ ++|+|+|||+|++++++.|+ +|++||+||+|+|
T Consensus 78 ~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~~~~hp~v~~~~-~~g~~~~~G~~~~l~~~~~~-~~~~~~~tp~e~r 155 (546)
T 2gks_A 78 VLRDPKNVPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMH-TWGEYYISGELKVIQLPKYY-DFPEYRKTPKQVR 155 (546)
T ss_dssp EEECTTCCEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHT-TSCSEEEECCEEESCCCCCC-SCGGGBCCHHHHH
T ss_pred EEECCCCeeEEEEEeceeecCCHHHHHHHHhCCCCCCCcchHHHh-hcCCEEEEEEEEEeecCCcC-CcHhhcCCHHHHH
Confidence 999889999999999999999999999999999999999999976 56999999999999998887 6999999999999
Q ss_pred HHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHhhC
Q 021558 236 DEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF 311 (311)
Q Consensus 236 ~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ny~ 311 (311)
+.|+++||++|||||||||+|||||+||+. ++.+. +++|||||++|+||+||||+++||+||+++++|||
T Consensus 156 ~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~---a~~~~---~~~llv~p~~g~~k~~di~~~~R~~~~~~~~~~~~ 225 (546)
T 2gks_A 156 EEIKSLGLDKIVAFQTRNPMHRVHEELTKR---AMEKV---GGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYEKYY 225 (546)
T ss_dssp HHHHHHTCSCEEEECCSSCCCHHHHHHHHH---HHHHH---TSEEEECCBCSBCCTTSCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCcEEEEecCCCCcHHHHHHHHH---HHHhc---CCcEEEEeCcCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999873 34455 48999999999999999999999999999999996
No 7
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=2.3e-72 Score=542.93 Aligned_cols=214 Identities=29% Similarity=0.425 Sum_probs=203.1
Q ss_pred ccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCeeecceeeEEecCHHHHHhcCCCCeEEEe
Q 021558 79 ATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALV 158 (311)
Q Consensus 79 ~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~~~piPIvL~v~~e~a~~l~~g~~vaL~ 158 (311)
++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++ |||||||+|+++ ++|++|++|+|
T Consensus 3 ~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~~--wpiPi~L~v~~~--~~l~~g~~v~L- 75 (349)
T 1v47_A 3 ETLPALEIGEDERLDLENLATGAFFPVKGFMTREEALSVA--HEMRLPTGEV--WTIPILLQFREK--PRVGPGNTVAL- 75 (349)
T ss_dssp -CCCEEECCHHHHHHHHHHHTTTTTTCCSBCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEESSC--CSCCTTCEEEE-
T ss_pred ccCceeecCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCCC--cCeEEEecCChh--hcCCCCCEEEE-
Confidence 5799999999999999999999999999999999999999 5999999988 899999999988 88999999999
Q ss_pred CCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeeeEEEeccCCCCCCCccccCCHHHHHHHH
Q 021558 159 DSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEF 238 (311)
Q Consensus 159 ~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~d~f~~~rltP~e~R~~f 238 (311)
+.+|+++|+|+|+|+|++||++||++||||+|++||||++++ +.|+|+|||+|++++ +++|++||+||+|+|+.|
T Consensus 76 ~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~d~~HPgv~~~~-~~g~~~vgG~v~~l~----~~~f~~~~~tP~e~r~~f 150 (349)
T 1v47_A 76 LHGGERVALLHVAEAYELDLEALARAVFGTDSETHPGVARLY-GKGPYALAGRVEVLK----PRPRTPLEKTPEEVRAFF 150 (349)
T ss_dssp EETTEEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HTCSEEEEBCEEESS----CCCCCTTCCCHHHHHHHH
T ss_pred ccCCeeEEEEEeeeeeccCHHHHHHHHhCCCCcCCcchHHHh-hcCCEEEEEEEEEEE----cCCchhhcCCHHHHHHHH
Confidence 679999999999999999999999999999999999999875 689999999999998 248999999999999999
Q ss_pred HhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHhhC
Q 021558 239 SKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF 311 (311)
Q Consensus 239 ~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ny~ 311 (311)
+++||++|||||||||+||||++|++ +|++. .|+|||||++|++|+||+|+++|++||++++++||
T Consensus 151 ~~~gw~~VvafqTrNPiHrgH~~l~~----~ale~---~d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~~~~ 216 (349)
T 1v47_A 151 RQRGWRKVVAFQTRNAPHRAHEYLIR----LGLEL---ADGVLVHPILGAKKPDDFPTEVIVEAYQALIRDFL 216 (349)
T ss_dssp HHTTCCSEEEEEESSCCCHHHHHHHH----HHHHH---SSEEEEEEBCSCCCTTSCCHHHHHHHHHHHHHHHS
T ss_pred HhcCCCeEEEeecCCCCchHHHHHHH----HHHHh---CCcEEEEECCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999986 56776 38999999999999999999999999999999984
No 8
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=100.00 E-value=3.1e-72 Score=569.00 Aligned_cols=222 Identities=28% Similarity=0.403 Sum_probs=212.1
Q ss_pred CCccCCCCCceeecccCchhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCe
Q 021558 51 AGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSV 130 (311)
Q Consensus 51 ~~li~PhGg~Lv~l~v~~~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~ 130 (311)
++|+.||||+|++| |+++++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 3 ~~~~~phgg~l~~~-~~~~~~~~~~~~a~~~~~~~l~~~~~~dlell~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~ 79 (552)
T 3cr8_A 3 NQLIEPYGGTLVNL-IDPEKREALKHEALSLPSLDLDWQQQCELEMLMTGAYSPLTGFMTRAQCARVE--SAQQLDDGSF 79 (552)
T ss_dssp CCCCCCGGGSCCCC-BCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCEECCHHHHHHHH--HHCBCTTCCB
T ss_pred CCCCCCCCCccccC-CChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 45889999999999 99999999999999999999999999999999999999999999999999999 6999999987
Q ss_pred eecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEee
Q 021558 131 VNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGG 210 (311)
Q Consensus 131 ~~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG 210 (311)
|||||||+|+++++++|++|++|+|+|.+|+++|+|+|+|+|++| |+|+|||
T Consensus 80 --~~~Pi~l~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~d--------------------------g~~~v~G 131 (552)
T 3cr8_A 80 --WPSPITLTSRDRALADRRPGERLALRDGEGYMLAILTLSDVWKDG--------------------------ERWHLAG 131 (552)
T ss_dssp --CCSCCCEEECCGGGTTCCTTCEEEEECTTSCEEEEEEEEEEEEET--------------------------TEEEEEE
T ss_pred --cceEEEEeCCHhHhhccCCCCEEEEECCCCcEEEEEEEEEEEeeC--------------------------CCEEEEE
Confidence 899999999999999999999999998899999999999999998 9999999
Q ss_pred eEEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCC
Q 021558 211 DLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTK 290 (311)
Q Consensus 211 ~v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK 290 (311)
+|++++++.|+ +|++||+||+|+|+.|+++||++|||||||||+|||||++++ ++++|.+ ++||||||+|+||
T Consensus 132 ~v~~~~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnp~Hrah~~~~~---~~~~~~~---~~lll~pl~g~~k 204 (552)
T 3cr8_A 132 EVEGAALPPHP-DFVSLRATPAELRALFVRRGWRRIIAWQARQPMHRAQYEFCL---KSAIENE---ANLLLHPQVGGDI 204 (552)
T ss_dssp EEEESCCCCCC-TTTTTBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHH---HHHHHTT---CEEEECCBCCCCT
T ss_pred EEEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCceEEEecCCCCchHHHHHHH---HHHHhcC---CeEEEEeccCCCC
Confidence 99999998887 599999999999999999999999999999999999999986 3555774 7899999999999
Q ss_pred CCCCChHHHHHHHHHHHHhh
Q 021558 291 ADDVPLSWRMKQHEKVLRLT 310 (311)
Q Consensus 291 ~dDvp~~vR~r~ye~ll~ny 310 (311)
+||||+++||+||+++++||
T Consensus 205 ~~d~~~~~r~~~~~~~~~~~ 224 (552)
T 3cr8_A 205 TEAPAYFGLVRSFLAIRDRF 224 (552)
T ss_dssp TTCTTHHHHHHHHHHHGGGS
T ss_pred CCCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999998
No 9
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=95.94 E-value=0.016 Score=48.02 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=40.8
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
|-||+|+||..|++ .|++.. +-+++.|...+.|...++.+-|++-.+..+.
T Consensus 9 sFDpvH~GH~~l~~----~a~~~~---d~v~v~~~~~p~k~~~~~~~~R~~ml~~a~~ 59 (158)
T 1qjc_A 9 TFDPITNGHIDIVT----RATQMF---DHVILAIAASPSKKPMFTLEERVALAQQATA 59 (158)
T ss_dssp CCTTCCHHHHHHHH----HHHTTS---SEEEEEEESCCSSCCSSCHHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHH----HHHHhC---CEEEEEECCCCCCCCCCCHHHHHHHHHHHHh
Confidence 89999999999986 566653 5577778777777778899999998887543
No 10
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=95.41 E-value=0.02 Score=47.55 Aligned_cols=55 Identities=15% Similarity=0.044 Sum_probs=38.2
Q ss_pred EEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCC--CCCChHHHHHHHHHHHH
Q 021558 247 FAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKA--DDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 247 vAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~--dDvp~~vR~r~ye~ll~ 308 (311)
+..=+-||+|+||..|++ .|++.. +.+++.|...+.|+ ..++.+.|++-.+..++
T Consensus 4 v~~GsFdp~H~GH~~l~~----~a~~~~---d~v~v~~~~~p~k~~~~~~~~~~R~~ml~~a~~ 60 (160)
T 1od6_A 4 VYPGSFDPLTNGHLDVIQ----RASRLF---EKVTVAVLENPSKRGQYLFSAEERLAIIREATA 60 (160)
T ss_dssp EEEECCTTCCHHHHHHHH----HHHHHS---SEEEEEEECC-----CCSSCHHHHHHHHHHHTT
T ss_pred EEEeeeCCCCHHHHHHHH----HHHHHC---CEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc
Confidence 333489999999999986 455653 45777777666565 57899999999887653
No 11
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=94.65 E-value=0.067 Score=45.67 Aligned_cols=51 Identities=24% Similarity=0.231 Sum_probs=40.7
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
|-||+|.||..+.+ +|.+.+ +-|++-+..-+.|..-++.+-|++..+..++
T Consensus 10 sFDPiH~GHl~ii~----~A~~~~---D~viv~v~~~~~K~~~~~~~eR~~ml~~a~~ 60 (157)
T 3nv7_A 10 TFDPVTNGHIDIIH----RSSELF---EKLIVAVAHSSAKNPMFSLDERLKMIQLATK 60 (157)
T ss_dssp CCTTCCHHHHHHHH----HHHTTS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT
T ss_pred EcCCCCHHHHHHHH----HHHHhC---CceEEEEccCCCCCCCCCHHHHHHHHHHHhc
Confidence 89999999999986 567764 5566665555667778999999999998764
No 12
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=94.35 E-value=0.085 Score=45.13 Aligned_cols=51 Identities=25% Similarity=0.200 Sum_probs=41.8
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
|-||+|.||..+.+ .|++.. |-|++-|...+.|..-++.+.|++-.+..++
T Consensus 20 sFdP~H~GHl~l~~----~A~~~~---D~viv~v~~~~~kk~~~~~~~R~~ml~~a~~ 70 (173)
T 1vlh_A 20 SFDPITLGHVDIIK----RALSIF---DELVVLVTENPRKKCMFTLEERKKLIEEVLS 70 (173)
T ss_dssp CCTTCCHHHHHHHH----HHHTTC---SEEEEEEECCTTCCCSSCHHHHHHHHHHHTT
T ss_pred EECcCcHHHHHHHH----HHHHHC---CEEEEEEeCCCCCCCCCCHHHHHHHHHHHhc
Confidence 89999999999986 567763 6688888777777788999999998886544
No 13
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=93.97 E-value=0.17 Score=42.46 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=40.4
Q ss_pred eEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 246 VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
++..=+-||+|+||..|.+ .|++.. +-+++.|..-+.|..-++.+-|++-.+..+.
T Consensus 5 ~i~~GsFDpvH~GH~~li~----~a~~~~---d~v~v~~~~~p~k~~l~~~~~R~~ml~~a~~ 60 (169)
T 1o6b_A 5 AVCPGSFDPVTYGHLDIIK----RGAHIF---EQVYVCVLNNSSKKPLFSVEERCELLREVTK 60 (169)
T ss_dssp EEEEECCTTCCHHHHHHHH----HHHHHS---SEEEEEECCCCSSCCSSCHHHHHHHHHHHHT
T ss_pred EEEEEeeCCCCHHHHHHHH----HHHHhC---CEEEEEECCCCccCCCCCHHHHHHHHHHHHh
Confidence 3444599999999999986 456653 4566666544456667899999998887653
No 14
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=93.61 E-value=0.14 Score=44.25 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=37.1
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHh
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~n 309 (311)
|-||+|.||..+.+ .|++.. |-|++-|-.-+.|..-++.+-|++-.+..++.
T Consensus 10 sFDPiH~GHl~i~~----~a~~~~---D~viv~v~~~~~K~~~~~~~~R~~ml~~a~~~ 61 (171)
T 3nd5_A 10 SFDPMTNGHLNLIE----RSAKLF---DEVIIGVFINTSKQTLFTPEEKKYLIEEATKE 61 (171)
T ss_dssp CCTTCCHHHHHHHH----HHHTTC---SEEEEEEEC------CCCHHHHHHHHHHHHTT
T ss_pred EccccCHHHHHHHH----HHHHHC---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHcc
Confidence 89999999999986 566663 56777776666787889999999998877653
No 15
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=93.53 E-value=0.11 Score=43.90 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=36.5
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEe-cccCC--CCCCCCChHHHHHHHHHHHHh
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH-PLGGY--TKADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~Lllh-PLvG~--tK~dDvp~~vR~r~ye~ll~n 309 (311)
|-||+|+||..|++ .|++.. +-+.+. |.--. +|...++.+.|++-.+..+++
T Consensus 8 sFdp~H~GH~~l~~----~a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~ 62 (168)
T 1f9a_A 8 RFQPFHKGHLEVIK----KIAEEV---DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKD 62 (168)
T ss_dssp CCTTCCHHHHHHHH----HHTTTC---SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTT
T ss_pred ecCCcCHHHHHHHH----HHHHhC---CeEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 89999999999986 455552 445443 33321 244578999999999887764
No 16
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=93.41 E-value=0.14 Score=44.15 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=40.4
Q ss_pred ceEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 245 AVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 245 ~VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
+++-|- |-||+|.||..+.+ .|.+.. +-+++-|..-+.|..-++.+-|++-.+..++
T Consensus 4 ki~i~~GsFDPiH~GHl~i~~----~a~~~~---d~viv~v~~~p~K~~~~~~~~R~~ml~~a~~ 61 (168)
T 3f3m_A 4 TIAVIPGSFDPITYGHLDIIE----RSTDRF---DEIHVCVLKNSKKEGTFSLEERMDLIEQSVK 61 (168)
T ss_dssp CEEEEEECCTTCCHHHHHHHH----HHGGGS---SEEEEEECC-----CCSCHHHHHHHHHHHTT
T ss_pred eEEEEEEEcCcCCHHHHHHHH----HHHHhC---CEEEEEEcCCCCCCCCCCHHHHHHhHHHHhc
Confidence 444444 99999999999986 566663 5677777766677788999999998887654
No 17
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=92.69 E-value=0.15 Score=43.55 Aligned_cols=55 Identities=20% Similarity=0.265 Sum_probs=37.8
Q ss_pred eEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHH
Q 021558 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVL 307 (311)
Q Consensus 246 VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll 307 (311)
++-|- |-||+|.||..+.+ .|.+.+ +-|++-+..-+.|..-++.+-|++..+..+
T Consensus 7 i~i~~GsFDPiH~GHl~li~----~A~~~~---d~viv~v~~~~~K~~~~~~~~R~~m~~~~~ 62 (162)
T 4f3r_A 7 IAIYPGTFDPLTNGHVDIIE----RALPLF---NKIIVACAPTSRKDPHLKLEERVNLIADVL 62 (162)
T ss_dssp EEEEEECCTTCCHHHHHHHH----HHGGGC---SEEEEEECCC------CCHHHHHHHHHHHC
T ss_pred EEEEEEEcCCCCHHHHHHHH----HHHHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHhh
Confidence 44444 99999999999986 567764 567776666666777799999999888765
No 18
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=92.62 E-value=0.29 Score=42.76 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=42.3
Q ss_pred eeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 250 QTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
=|-||+|.||..|.+ +|++.. |-|++-|..-+.|..-++.+-|++-.+..++
T Consensus 28 GsFDPiH~GHl~ii~----~A~~~~---D~Viv~v~~np~K~~~~s~eeR~~mv~~a~~ 79 (177)
T 3nbk_A 28 GSFDPVTLGHVDIFE----RAAAQF---DEVVVAILVNPAKTGMFDLDERIAMVKESTT 79 (177)
T ss_dssp ECCTTCCHHHHHHHH----HHHHHS---SEEEEEECCCTTSCCSSCHHHHHHHHHHHCT
T ss_pred EeeCCCCHHHHHHHH----HHHHHC---CEEEEEEcCCCCCCCCCCHHHHHHHHHHHhC
Confidence 399999999999986 456663 6688888777778888999999998887654
No 19
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=92.46 E-value=0.31 Score=41.58 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=38.0
Q ss_pred eEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCC---CCCCCCChHHHHHHHHHHHH
Q 021558 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY---TKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 246 VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~---tK~dDvp~~vR~r~ye~ll~ 308 (311)
++..=+-||+|+||..|++ .|.+.. +-+.+.+..+. +|...++.+-|++-.+..+.
T Consensus 6 ~i~~G~Fdp~H~GH~~l~~----~a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~~~~~a~~ 64 (181)
T 1ej2_A 6 GLLVGRMQPFHRGHLQVIK----SILEEV---DELIICIGSAQLSHSIRDPFTAGERVMMLTKALS 64 (181)
T ss_dssp EEEEECCTTCCHHHHHHHH----HHTTTC---SEEEEEECSTTCCSSSSSCSCHHHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHH----HHHHhC---CeeEEEECCCCCCcCCCCCCCHHHHHHHHHHHHh
Confidence 3444499999999999986 455552 44444332222 24557899999999988775
No 20
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=91.96 E-value=0.24 Score=42.60 Aligned_cols=59 Identities=19% Similarity=0.121 Sum_probs=35.3
Q ss_pred eEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecc-cCCCC--CCCCChHHHHHHHHHHHHh
Q 021558 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPL-GGYTK--ADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 246 VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPL-vG~tK--~dDvp~~vR~r~ye~ll~n 309 (311)
++..=+-||+|+||..|++. |++.. +.+.+++.|. .-+.| ..-++.+-|++-.+..++.
T Consensus 10 ~v~~GsFdp~H~GH~~l~~~----a~~~~-~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~a~~~ 71 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANE----VLYQA-GLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQS 71 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHH----HHHHT-TCSEEEEEECCCC---------CHHHHHHHHHHHHTT
T ss_pred EEEEeccccccHHHHHHHHH----HHHHh-CCCEEEEEECCCCCCcCCcCCCCHHHHHHHHHHHHcC
Confidence 34445999999999999874 44441 1245666554 22334 3567899999988876543
No 21
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=91.82 E-value=0.28 Score=41.55 Aligned_cols=54 Identities=17% Similarity=0.141 Sum_probs=36.3
Q ss_pred eeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecc-cCCCC--CCCCChHHHHHHHHHHHH
Q 021558 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPL-GGYTK--ADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 250 QTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPL-vG~tK--~dDvp~~vR~r~ye~ll~ 308 (311)
=+-||+|+||..|++. |++.. +.+-+++.|- .-+.| ..-.+.+-|++-.+..++
T Consensus 9 GsFDPvH~GH~~li~~----a~~~~-~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~~~~ 65 (189)
T 2qtr_A 9 GTFDPPHYGHLLIANE----VYHAL-NLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATE 65 (189)
T ss_dssp ECCSSCCHHHHC-CHH----HHHHT-TCSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHT
T ss_pred cCcccccHHHHHHHHH----HHHHc-CCCEEEEEECCCCCCccCCCCCCHHHHHHHHHHHhC
Confidence 4899999999999874 44441 1245656555 33345 456899999998887654
No 22
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=90.81 E-value=0.55 Score=41.05 Aligned_cols=58 Identities=21% Similarity=0.152 Sum_probs=42.5
Q ss_pred CceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHH
Q 021558 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 244 ~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~dDvp~~vR~r~ye~ll~ 308 (311)
+.++..=+-||+|+||..|++ .|.+.. +-+.+-+..-+.|..-++.+-|++..+.+++
T Consensus 23 ki~v~~GsFDpiH~GHl~li~----~A~~~~---d~viv~v~~~p~K~~l~s~eeR~~ml~~~~~ 80 (187)
T 3k9w_A 23 VVAVYPGTFDPLTRGHEDLVR----RASSIF---DTLVVGVADSRAKKPFFSLEERLKIANEVLG 80 (187)
T ss_dssp CEEEEEECCTTCCHHHHHHHH----HHHHHS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCcCcHHHHHHHH----HHHHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHHhc
Confidence 334545599999999999986 455653 4455555555567778899999999998754
No 23
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=90.17 E-value=0.91 Score=39.52 Aligned_cols=58 Identities=16% Similarity=0.084 Sum_probs=38.9
Q ss_pred EEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccC-CCCC-CCCChHHHHHHHHHHHHh
Q 021558 247 FAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-YTKA-DDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 247 vAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG-~tK~-dDvp~~vR~r~ye~ll~n 309 (311)
+..=+-||+|+||..|++.+.+.+ + .+.+++.|... +.|+ .-++.+-|++-.+..++.
T Consensus 7 i~~GsFdPiH~GH~~l~~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~R~~ml~~a~~~ 66 (213)
T 1k4m_A 7 LFGGTFDPVHYGHLKPVETLANLI---G--LTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIAD 66 (213)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH---T--CSCEEEEECSSCTTSCCCSSCHHHHHHHHHHHHTT
T ss_pred EEEeCcCCCCHHHHHHHHHHHHHc---C--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHhcc
Confidence 334499999999999987543322 2 24466666544 3453 568999999999876543
No 24
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=90.12 E-value=0.35 Score=45.29 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=40.9
Q ss_pred eEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCC------C----CCCCChHHHHHHHHHHHHh
Q 021558 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYT------K----ADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 246 VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~t------K----~dDvp~~vR~r~ye~ll~n 309 (311)
+..|- |-||+|.||..|.+ .|++. ++-|+|-|..-+. | ..-++.+.|++-.+..+++
T Consensus 4 ~~i~~GtFdP~h~GHl~~~~----~a~~~---~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~ 71 (365)
T 1lw7_A 4 VGVIFGKFYPVHTGHINMIY----EAFSK---VDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKY 71 (365)
T ss_dssp EEEEEECCSSCCHHHHHHHH----HHHTT---CSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTST
T ss_pred EEEEEEeeCCCCHHHHHHHH----HHHHH---CCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhc
Confidence 33344 99999999999986 45665 3678787766543 1 2249999999988877643
No 25
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=89.93 E-value=0.41 Score=40.20 Aligned_cols=53 Identities=17% Similarity=0.320 Sum_probs=37.8
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCC--C--CCCCChHHHHHHHHHHH-Hh
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYT--K--ADDVPLSWRMKQHEKVL-RL 309 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~t--K--~dDvp~~vR~r~ye~ll-~n 309 (311)
|-||+|.||..+.+. |++.+ .+-|++-|..... | ..-++.+.|++..+.++ +.
T Consensus 8 tFDPiH~GHl~l~~~----a~~~~--~d~viv~v~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~ 65 (148)
T 3do8_A 8 TFEPLHEGHKKLIDV----AIKLG--GRDITIGVTSDRMARARIRSVLPFAIRAENVKRYVMRK 65 (148)
T ss_dssp CCSSCCHHHHHHHHH----HHHHH--TTCEEEEEECHHHHHHHSCCCSCHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHH----HHHhC--CCEEEEEECCCccccccCCCCCCHHHHHHHHHHHHhcc
Confidence 899999999999864 44442 1456665554432 3 55689999999999887 53
No 26
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=89.93 E-value=0.37 Score=44.42 Aligned_cols=56 Identities=16% Similarity=0.203 Sum_probs=39.4
Q ss_pred eEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCC---CCCCCCChHHHHHHHHHHHH
Q 021558 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY---TKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 246 VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~---tK~dDvp~~vR~r~ye~ll~ 308 (311)
+.-|= |-||+|.||..|.+ .|++.. +-+++-+.... +|..-++.+.|++-.+..++
T Consensus 9 ~~i~~GtFdP~h~GHl~~~~----~a~~~~---d~~~~~v~~~~~~~~~~~~~~~~~R~~m~~~~~~ 68 (352)
T 2qjt_B 9 ISVFIGRFQPFHKGHLHNII----IALQNS---KKVIINIGSCFNTPNIKNPFSFEQRKQMIESDLQ 68 (352)
T ss_dssp EEEEEECCTTCCHHHHHHHH----HHHHSE---EEEEEEEEEESCCCCSSSCSCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCChHHHHHHH----HHHHhC---CcEEEEECCCCCCcccCCCCCHHHHHHHHHHHhc
Confidence 33344 89999999999986 456652 44555444432 45667899999999988774
No 27
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=88.90 E-value=0.48 Score=40.87 Aligned_cols=57 Identities=19% Similarity=0.191 Sum_probs=37.8
Q ss_pred ceEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccC-CCCCCCCChHHHHHHHHHHHHh
Q 021558 245 AVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-YTKADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 245 ~VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG-~tK~dDvp~~vR~r~ye~ll~n 309 (311)
+|.-|- |-||+|.||..+.+ |++. .+-+++.|... +.|.+-++++-|++-.+..+++
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-----a~~~---~d~v~~~p~~~~~~k~~~~~~~~R~~m~~~a~~~ 61 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-----SLSH---FDLVLLEPSIAHAWGKNMLDYPIRCKLVDAFIKD 61 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-----TCTT---SSEEEEEECC-------CCCHHHHHHHHHHHHHH
T ss_pred EEEEEEeccchhhHHHHHHHH-----HHHH---CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 343344 89999999999863 3333 25677777653 4567789999999999887765
No 28
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=88.87 E-value=0.95 Score=40.74 Aligned_cols=60 Identities=22% Similarity=0.209 Sum_probs=41.1
Q ss_pred CceEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CC-CCCCChHHHHHHHHHHHH
Q 021558 244 DAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY-TK-ADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 244 ~~VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~-tK-~dDvp~~vR~r~ye~ll~ 308 (311)
++|+-|- |-||+|.||..|++. |++.. +.+.+++-|.... .| ..-++.+-|++-.+..++
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~----a~~~~-~ld~v~v~~~~~~p~K~~~~~~~~~R~~ml~~a~~ 85 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVE----MAEQF-ALDELRLLPNARPPHRETPQVSAAQRLAMVERAVA 85 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHH----HHHHH-TCSEEEEEECCCCGGGSCTTCCHHHHHHHHHHHHT
T ss_pred ceEEEEEeeCcHhhHHHHHHHHH----HHHHc-CCCEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc
Confidence 3444444 999999999999874 34431 1256777666653 44 357899999999887653
No 29
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=87.96 E-value=1.1 Score=40.31 Aligned_cols=59 Identities=24% Similarity=0.281 Sum_probs=37.9
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhcC-CCCcEEEecccC-CCCCCCCChHHHHHHHHHHHHh
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMGY-QNPILLLHPLGG-YTKADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~~-~~~~LllhPLvG-~tK~dDvp~~vR~r~ye~ll~n 309 (311)
|-||+|+||..|++.+++.+-+.+. ..-++++.|... +.|+.-++.+-|++-.+..+++
T Consensus 14 sFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~ 74 (252)
T 1nup_A 14 SFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQT 74 (252)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGG
T ss_pred cCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999865444332110 000134555432 3355678999999988877654
No 30
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=87.51 E-value=1.4 Score=37.43 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=35.9
Q ss_pred eeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CC--CCCCChHHHHHHHHHHHHh
Q 021558 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY-TK--ADDVPLSWRMKQHEKVLRL 309 (311)
Q Consensus 250 QTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~-tK--~dDvp~~vR~r~ye~ll~n 309 (311)
=+-||+|+||..|++.+ ++.. ..+-+++.|.... .| ..-++.+-|++-.+..++.
T Consensus 9 GsFdp~H~GH~~l~~~a----~~~~-~~d~v~~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~~ 66 (189)
T 2h29_A 9 GQFNPIHTAHMIVASEV----FHEL-QPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDE 66 (189)
T ss_dssp ECCTTCCHHHHHHHHHH----HHHH-CCSEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHHH
T ss_pred ecCCcccHHHHHHHHHH----HHHc-CCCEEEEEECCCCCCCcCCCCCCHHHHHHHHHHHHcC
Confidence 38999999999998743 4331 1234554554333 34 3457999999988876543
No 31
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=82.89 E-value=3.1 Score=33.07 Aligned_cols=54 Identities=24% Similarity=0.252 Sum_probs=34.4
Q ss_pred ceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHH
Q 021558 245 AVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEK 305 (311)
Q Consensus 245 ~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG-----~tK~dDvp~~vR~r~ye~ 305 (311)
.++..=+-||+|+||..|++ .|.+.. +-+.+-+... ..|..-++.+-|++-.++
T Consensus 3 ~~~~~G~FDp~H~GH~~li~----~a~~~~---~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~ 61 (132)
T 2b7l_A 3 RVITYGTYDLLHYGHIELLR----RAREMG---DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLES 61 (132)
T ss_dssp EEEEEECCCSCCHHHHHHHH----HHHHTS---SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHT
T ss_pred EEEEeeecCcCCHHHHHHHH----HHHHhC---CcEEEEEECCHHHhccCCCCCCCHHHHHHHHHh
Confidence 34445589999999999986 456663 3333333221 123345788999887764
No 32
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=82.31 E-value=2.5 Score=38.90 Aligned_cols=58 Identities=24% Similarity=0.331 Sum_probs=36.1
Q ss_pred eCCCCcchHHHHHHHHHHHHHHhc-CCCCcEEEecccC-CCCCCCCChHHHHHHHHHHHH
Q 021558 251 LRNPVHNGHALLMTDTRRRLLEMG-YQNPILLLHPLGG-YTKADDVPLSWRMKQHEKVLR 308 (311)
Q Consensus 251 TRNPlHRaHe~L~k~~~~~ale~~-~~~~~LllhPLvG-~tK~dDvp~~vR~r~ye~ll~ 308 (311)
|-||+|.||..|.+.+++.+-..+ ++.-++++.|.-. +.|..-++.+-|++-.+..++
T Consensus 16 sFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~ 75 (279)
T 1kqn_A 16 SFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATK 75 (279)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTT
T ss_pred eecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhc
Confidence 999999999999876544332211 0000114445422 345667899999998887654
No 33
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=79.86 E-value=2.9 Score=33.10 Aligned_cols=53 Identities=21% Similarity=0.214 Sum_probs=34.1
Q ss_pred eEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHH
Q 021558 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEK 305 (311)
Q Consensus 246 VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG-----~tK~dDvp~~vR~r~ye~ 305 (311)
++..=+-||+|+||..|++ .|.+.. +-+.+-+... ..+..-++.+-|++-.++
T Consensus 4 ~~~~G~FDp~H~GH~~li~----~a~~~~---d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~ 61 (129)
T 1coz_A 4 VITYGTFDLLHWGHIKLLE----RAKQLG---DYLVVAISTDEFNLQKQKKAYHSYEHRKLILET 61 (129)
T ss_dssp EEEEECCCSCCHHHHHHHH----HHHTTS---SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTT
T ss_pred EEEEEeCCCCCHHHHHHHH----HHHHhC---CCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHh
Confidence 4444589999999999986 456653 3344433321 123457788889877664
No 34
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=79.68 E-value=1.6 Score=39.75 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=33.6
Q ss_pred EEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEE-ecccC--CCCCCCCChHHHHHHHHHHH
Q 021558 248 AFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLL-HPLGG--YTKADDVPLSWRMKQHEKVL 307 (311)
Q Consensus 248 AFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lll-hPLvG--~tK~dDvp~~vR~r~ye~ll 307 (311)
..=+-||+|+||..|++ .|++.. +-+.+ .|--. .+|..-++.+-|++-.+..+
T Consensus 12 ~~G~FdP~H~GH~~li~----~a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~ 67 (341)
T 2qjo_A 12 YIGRFQPFHLGHLRTLN----LALEKA---EQVIIILGSHRVAADTRNPWRSPERMAMIEACL 67 (341)
T ss_dssp EEECCTTCCHHHHHHHH----HHHHHE---EEEEEEEEEETCCCCSSSCSCHHHHHHHHHTTS
T ss_pred EEEEeCCCCHHHHHHHH----HHHHhC---CeEEEEECCcccCCCCCCCCCHHHHHHHHHHHh
Confidence 33399999999999986 455542 22332 22221 13455689999988776554
No 35
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=76.65 E-value=2.4 Score=34.71 Aligned_cols=55 Identities=16% Similarity=0.093 Sum_probs=34.4
Q ss_pred CceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHH
Q 021558 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEK 305 (311)
Q Consensus 244 ~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG-----~tK~dDvp~~vR~r~ye~ 305 (311)
++|++.=+-||+|+||..|++ .|.+.+ +-+.+-.... ..+.--.+.+-|++..+.
T Consensus 3 ~~v~~~G~FD~vH~GH~~li~----~a~~~~---~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~ 62 (143)
T 3glv_A 3 IRVMATGVFDILHLGHIHYLK----ESKKLG---DELVVVVARDSTARNNGKIPIFDENSRLALISE 62 (143)
T ss_dssp CEEEEEECCSSCCHHHHHHHH----HHHTTS---SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTT
T ss_pred eEEEEEeecCCCCHHHHHHHH----HHHHhC---CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHh
Confidence 556777799999999999986 456653 2233211111 123445778888876654
No 36
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=76.54 E-value=0.52 Score=44.18 Aligned_cols=57 Identities=23% Similarity=0.294 Sum_probs=40.2
Q ss_pred cCCHHHHHHHHHhcCCCceEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCC----cEEEecccCCCCCCCCC
Q 021558 228 RLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNP----ILLLHPLGGYTKADDVP 295 (311)
Q Consensus 228 rltP~e~R~~f~~~Gw~~VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~----~LllhPLvG~tK~dDvp 295 (311)
-.|.+|+|+..++ .+-+||. |=.=+|+||..|++. |.+. ++ .+++||+- -...+|++
T Consensus 8 ~~ti~~lr~~~~~---g~~ig~VPTMG~LH~GH~sLi~~----A~~~---~d~vVvSifvnP~q-f~~~ed~~ 69 (283)
T 3uk2_A 8 ISSIQELRDQLRG---QNRTAFVPTMGNLHEGHLSLMRL----ARQH---GDPVVASIFVNRLQ-FGPNEDFD 69 (283)
T ss_dssp ECCHHHHHHHTTT---CSSCEEEEECSSCCHHHHHHHHH----HHTT---CSSEEEEECCCGGG-SCTTSCTT
T ss_pred EcCHHHHHHHHHc---CCeEEEECCCCcccHHHHHHHHH----HHHh---CCEEEEEEcCCHHH-cCCccccc
Confidence 3579999999876 4457888 999999999999974 4443 23 34567764 33455654
No 37
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=75.09 E-value=5.6 Score=36.89 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=31.9
Q ss_pred cCCHHHHHHHHHhcCCCceEEEe-eCCCCcchHHHHHHHH
Q 021558 228 RLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDT 266 (311)
Q Consensus 228 rltP~e~R~~f~~~Gw~~VvAFQ-TRNPlHRaHe~L~k~~ 266 (311)
-.|++|+|+..+.....+-+||. |=.-+|.||..|++.|
T Consensus 7 ~~ti~~lr~~~~~~~~g~~ig~VPTMGaLH~GHlsLv~~A 46 (264)
T 3n8h_A 7 ADNIKQFHSIRNSLIKQQKIGFVPTMGALHNGHISLIKKA 46 (264)
T ss_dssp ECSHHHHHHHHHTSCTTSCEEEEEECSSCCHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHhCCCcEEEECCCcchhHHHHHHHHHH
Confidence 45899999998865334578898 9999999999999743
No 38
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=72.29 E-value=4.7 Score=38.23 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=39.3
Q ss_pred ceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEe----c--ccCCCC--CCCCChHHHHHHHHH
Q 021558 245 AVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----P--LGGYTK--ADDVPLSWRMKQHEK 305 (311)
Q Consensus 245 ~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lllh----P--LvG~tK--~dDvp~~vR~r~ye~ 305 (311)
.|++.=+-+++|+||.+|++.+.+.|-+.+. +.+++. | ++.+.+ .-=.+.+-|++-.+.
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~--~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~ 83 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGA--KAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAES 83 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTC--EEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHH
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCC--cEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHh
Confidence 5777779999999999999987777766542 223332 2 333322 224578888877665
No 39
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=66.04 E-value=11 Score=35.78 Aligned_cols=40 Identities=20% Similarity=0.308 Sum_probs=29.1
Q ss_pred ccCCHHHHHHHHHh-cCCCceEEEe-eCCCCcchHHHHHHHH
Q 021558 227 FRLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDT 266 (311)
Q Consensus 227 ~rltP~e~R~~f~~-~Gw~~VvAFQ-TRNPlHRaHe~L~k~~ 266 (311)
.-.|+.|+|+.... +...+-+||. |=+-+|.||..|++.+
T Consensus 24 ii~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLi~~A 65 (314)
T 3inn_A 24 IIHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRA 65 (314)
T ss_dssp EECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHcCCeEEEEcCCCccCHHHHHHHHHH
Confidence 33578999988753 1223357787 9999999999999744
No 40
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=65.56 E-value=6.2 Score=37.87 Aligned_cols=25 Identities=28% Similarity=0.507 Sum_probs=21.0
Q ss_pred CCCceEEEeeCCCCcchHHHHHHHH
Q 021558 242 NADAVFAFQLRNPVHNGHALLMTDT 266 (311)
Q Consensus 242 Gw~~VvAFQTRNPlHRaHe~L~k~~ 266 (311)
+-++|+++=.-||+|+||.++++.+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a 75 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKG 75 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHH
T ss_pred CCCEEEEEEecCccCHHHHHHHHHH
Confidence 3367888989999999999999744
No 41
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=61.66 E-value=12 Score=34.72 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=37.8
Q ss_pred eEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEe----c-ccCCC-CCCCCChHHHHHHHHH
Q 021558 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----P-LGGYT-KADDVPLSWRMKQHEK 305 (311)
Q Consensus 246 VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lllh----P-LvG~t-K~dDvp~~vR~r~ye~ 305 (311)
|++.=+-+.+|+||..|++.+++.|-+.+. ..+++. | ++.+. ..--.+.+-|++..++
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~--~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~ 65 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKD--DSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSR 65 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTC--CCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTT
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCC--eEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHh
Confidence 566667899999999999988777766542 223442 3 33332 1236778888876654
No 42
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=56.59 E-value=8 Score=32.23 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=41.5
Q ss_pred CCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHH--hhCCCCCCChhHHHHHHhcCCEEEeeeEEEe
Q 021558 151 ESTRVALVDSDDNVVAILNDIEIYKHPKEERIAR--TWGTTAPGLPYVDQAITYAGNWLIGGDLEVL 215 (311)
Q Consensus 151 ~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~--VfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l 215 (311)
+|.++-|+|.+|++++....++ -+-+|-+ |+-+++++||-.+ .-|+|.|.|++.+-
T Consensus 54 ~~~r~~l~d~eG~Il~~~~~~~-----~~~ralrnFi~~sd~~~~P~qk----~ygr~~i~GPf~i~ 111 (138)
T 3v67_A 54 PRPRVFFSDYNGNVLTTDKRSN-----FQLRAMQNFVTSIEDYNKPKQR----LYGRYMIAGPVPIV 111 (138)
T ss_dssp CSCEEEEECTTSCEECCCCSCH-----HHHHHHHHHHHHCSCTTSCEEE----EETTEEEEEEEEEE
T ss_pred CCccEEEEcCCCCEecCCcccc-----hhHHHHHHHHHhccCccCchhh----hhCcEEEeCCEEEE
Confidence 5778999999999999775442 1223333 4467778899865 58999999998864
No 43
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=54.88 E-value=16 Score=33.80 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=25.1
Q ss_pred cCCHHHHHHHHHhcCCCceEEEe-eCCCCcchHHHHHHHH
Q 021558 228 RLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDT 266 (311)
Q Consensus 228 rltP~e~R~~f~~~Gw~~VvAFQ-TRNPlHRaHe~L~k~~ 266 (311)
..+..++|+..++.| ++|. |=.-+|+||..|++.+
T Consensus 4 ~~~~~~l~~~~~~~g----i~~VpTmG~lH~GH~~Li~~A 39 (276)
T 1v8f_A 4 VSTVAELRAALPREG----VGFVPTMGYLHRGHLALVERA 39 (276)
T ss_dssp ECSHHHHHHHCCSSC----EEEEEECSSCCHHHHHHHHHH
T ss_pred EecHHHHHHHHhhcC----ceEEEeCCCccHHHHHHHHHH
Confidence 347888888774444 6665 5444999999999744
No 44
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=53.19 E-value=17 Score=34.08 Aligned_cols=38 Identities=21% Similarity=0.340 Sum_probs=28.0
Q ss_pred cCCHHHHHHHHHh-cCCCceEEEe-eCCCCcchHHHHHHH
Q 021558 228 RLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTD 265 (311)
Q Consensus 228 rltP~e~R~~f~~-~Gw~~VvAFQ-TRNPlHRaHe~L~k~ 265 (311)
-.|+.|+|+.... +...+-+||. |=.-+|.||..|++.
T Consensus 7 ~~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLv~~ 46 (287)
T 3q12_A 7 IETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDE 46 (287)
T ss_dssp ECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHH
Confidence 3578999988753 1122357787 888899999999974
No 45
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=51.29 E-value=30 Score=31.99 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHhc--CCCceEEEeeCCCCcchHHHHHHHH
Q 021558 229 LSPAQLRDEFSKR--NADAVFAFQLRNPVHNGHALLMTDT 266 (311)
Q Consensus 229 ltP~e~R~~f~~~--Gw~~VvAFQTRNPlHRaHe~L~k~~ 266 (311)
.++.|+|+..+.. .-++|+..=|-+-+|+||..|++.+
T Consensus 5 ~~~~el~~~~~~~r~~g~~V~~vgtfdgLH~GH~sLI~~A 44 (280)
T 2ejc_A 5 ETIEEMKKFSEEMREKKKTIGFVPTMGYLHEGHLSLVRRA 44 (280)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEECSCCCHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHhcCCEEEEEcCCccccHHHHHHHHHH
Confidence 4788888754421 2245666669999999999999743
No 46
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=48.87 E-value=29 Score=32.24 Aligned_cols=38 Identities=11% Similarity=0.286 Sum_probs=24.1
Q ss_pred cCCHHHHHHHHHhcC-CCceEEEe-eCCCCcchHHHHHHH
Q 021558 228 RLSPAQLRDEFSKRN-ADAVFAFQ-LRNPVHNGHALLMTD 265 (311)
Q Consensus 228 rltP~e~R~~f~~~G-w~~VvAFQ-TRNPlHRaHe~L~k~ 265 (311)
-.|+.|+|+..+... ..+-+||. |=.-+|+||..|++.
T Consensus 5 ~~~~~~l~~~~~~~r~~g~~I~fVpTmG~lH~GH~~LI~~ 44 (283)
T 3ag6_A 5 ITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRE 44 (283)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHhcCCcEEEEECCccccHHHHHHHHH
Confidence 357888987543211 12345674 433499999999974
No 47
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=47.61 E-value=12 Score=34.08 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=45.1
Q ss_pred ccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEe----cccCCCC-CCCCChHHHHH
Q 021558 227 FRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----PLGGYTK-ADDVPLSWRMK 301 (311)
Q Consensus 227 ~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lllh----PLvG~tK-~dDvp~~vR~r 301 (311)
.+.|-.+.+......+-.+|+..=+-+|+|.||..+++ +|.+.. .++.|+|- +.+-..| .--++.+-|++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~V~~~GtFD~~H~GHl~iL~----rAk~lf-~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e 134 (236)
T 3hl4_A 60 VRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALM----QAKNLF-PNTYLIVGVCSDELTHNFKGFTVMNENERYD 134 (236)
T ss_dssp CCCCHHHHHHCCCTTSCEEEEEEECCTTCCHHHHHHHH----HHHTSS-SSEEEEEEECCHHHHHHHTCCCSSCHHHHHH
T ss_pred hhccHHHHhcCCCCCCCeEEEEeccCCCCCHHHHHHHH----HHHHhc-CCCeEEEEEcccHHHhhcCCCCCCCHHHHHH
Confidence 35666666554433333456666699999999999986 455551 11334442 2221123 34789999999
Q ss_pred HHHHH
Q 021558 302 QHEKV 306 (311)
Q Consensus 302 ~ye~l 306 (311)
+.+++
T Consensus 135 ~v~~~ 139 (236)
T 3hl4_A 135 AVQHC 139 (236)
T ss_dssp HHHTB
T ss_pred HHHHh
Confidence 88764
No 48
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=43.75 E-value=24 Score=32.96 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=29.5
Q ss_pred cCCHHHHHHHHHh-cCCCceEEEe-eCCCCcchHHHHHHHH
Q 021558 228 RLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDT 266 (311)
Q Consensus 228 rltP~e~R~~f~~-~Gw~~VvAFQ-TRNPlHRaHe~L~k~~ 266 (311)
-.|++|+|+..+. +.-.+-+||. |=.-+|.||..|++.|
T Consensus 7 ~~ti~elr~~~~~~~~~g~~Ig~VPTMGaLH~GHlsLv~~A 47 (285)
T 3mxt_A 7 ITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA 47 (285)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHHH
Confidence 3579999988753 1223467888 9999999999999744
No 49
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=41.25 E-value=54 Score=26.51 Aligned_cols=57 Identities=21% Similarity=0.141 Sum_probs=37.7
Q ss_pred ceeeEEecCHHHHHhcCCC-----------CeEEEeCCCCcEEEEEEeCcccC-CCHHHHHHHhhCCCC
Q 021558 134 SVPIVLAIDDEQKRRIGES-----------TRVALVDSDDNVVAILNDIEIYK-HPKEERIARTWGTTA 190 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~g-----------~~vaL~~~eG~~vAiL~V~eiy~-~Dk~~ea~~VfGT~d 190 (311)
++|++.+.+.+.++.+..- -...|+|++|++++.....+... .+-++..+.+.+|.-
T Consensus 100 ~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 100 NVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred CceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 3488888776666665432 25888999999999987555543 356666666665544
No 50
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=37.88 E-value=1.1e+02 Score=29.74 Aligned_cols=44 Identities=23% Similarity=0.343 Sum_probs=30.9
Q ss_pred CHHHHHHHHHhcCCCceEEEeeCCC-CcchHHHHHHHHHHHHHHhc
Q 021558 230 SPAQLRDEFSKRNADAVFAFQLRNP-VHNGHALLMTDTRRRLLEMG 274 (311)
Q Consensus 230 tP~e~R~~f~~~Gw~~VvAFQTRNP-lHRaHe~L~k~~~~~ale~~ 274 (311)
...++++.++.+...-.+|||--.+ +|-||..-++ .++...+.|
T Consensus 18 ~~~~L~~~L~~~~~~iy~G~dPTg~sLHlGh~v~l~-~l~~lQ~~G 62 (419)
T 2ts1_A 18 DEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATIL-TMRRFQQAG 62 (419)
T ss_dssp CHHHHHHHHHHSCCEEEEEECCSSSSCBGGGHHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHcCCCCEEEEeeCCCCCCccHHHHHHHH-HHHHHHHCC
Confidence 4678999998766667899994445 9999965443 334455555
No 51
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=35.26 E-value=54 Score=31.04 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=36.8
Q ss_pred CceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEe----cccCCCC-CCCCChHHHHHHHHHH
Q 021558 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----PLGGYTK-ADDVPLSWRMKQHEKV 306 (311)
Q Consensus 244 ~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lllh----PLvG~tK-~dDvp~~vR~r~ye~l 306 (311)
++|++.=+-+|+|.||..+++ +|.+.+ +-|.+- |.+-..| +-=++.+-|++..+++
T Consensus 8 ~~v~~~G~FD~lH~GH~~lL~----~A~~l~---d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l 68 (341)
T 3elb_A 8 VRVWCDGCYDMVHYGHSNQLR----QARAMG---DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAI 68 (341)
T ss_dssp CEEEEEECCCSCCHHHHHHHH----HHHHTS---SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHB
T ss_pred eEEEEEeeCCCCCHHHHHHHH----HHHHhC---CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHc
Confidence 457777799999999999986 566664 323322 2211112 3457889998888764
No 52
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=33.44 E-value=1.2e+02 Score=28.04 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCCceEEEeeCCC-CcchHHHHHHHHHHHHHHhc
Q 021558 231 PAQLRDEFSKRNADAVFAFQLRNP-VHNGHALLMTDTRRRLLEMG 274 (311)
Q Consensus 231 P~e~R~~f~~~Gw~~VvAFQTRNP-lHRaHe~L~k~~~~~ale~~ 274 (311)
..++++.++.+...-.+|||--.+ +|-||..-++ .++...+.|
T Consensus 22 ~~~l~~~l~~~~~~vy~G~~PTg~slHlGh~l~l~-~~~~lQ~~g 65 (322)
T 2yxn_A 22 EEALAERLAQGPIALVCGFDPTADSLHLGHLVPLL-CLKRFQQAG 65 (322)
T ss_dssp HHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTT
T ss_pred HHHHHHHHcCCCCEEEEeecCCCCcccHHHHHHHH-HHHHHHHcC
Confidence 778999998777777899994455 9999955333 234444544
No 53
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=29.42 E-value=2.4e+02 Score=27.14 Aligned_cols=44 Identities=25% Similarity=0.313 Sum_probs=31.0
Q ss_pred CHHHHHHHHHhcCCCceEEEeeCCC-CcchHHHHHHHHHHHHHHhc
Q 021558 230 SPAQLRDEFSKRNADAVFAFQLRNP-VHNGHALLMTDTRRRLLEMG 274 (311)
Q Consensus 230 tP~e~R~~f~~~Gw~~VvAFQTRNP-lHRaHe~L~k~~~~~ale~~ 274 (311)
...++++.++.+...-.+|||--.+ +|-||..-++ .++...+.|
T Consensus 20 ~~~~L~~~L~~~~~~iy~G~dPTg~sLHlGh~v~l~-~~~~lQ~~G 64 (420)
T 1jil_A 20 DEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFL-TLRRFQEHG 64 (420)
T ss_dssp CHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHcCCCCEEEEeeCCCCCCccHHHHHHHH-HHHHHHHCC
Confidence 4688999998776667899994445 9999965443 334455555
No 54
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=29.35 E-value=1.1e+02 Score=23.30 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=32.5
Q ss_pred ceeeEEecCHHHHHhcCC--CCeEEEeCCCCcEEEEEEeCcccC-CCHHHHHHHhhCCCCCCChh
Q 021558 134 SVPIVLAIDDEQKRRIGE--STRVALVDSDDNVVAILNDIEIYK-HPKEERIARTWGTTAPGLPY 195 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~--g~~vaL~~~eG~~vAiL~V~eiy~-~Dk~~ea~~VfGT~d~~HPg 195 (311)
++|+..+.+.+.++.+.. --.+.|+|++|+++....-..-+. .+-++..++.-+..+..||+
T Consensus 86 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~~~~~ 150 (152)
T 3gl3_A 86 EFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEGHHHH 150 (152)
T ss_dssp CSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--------
T ss_pred CCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccccccc
Confidence 447888877777665543 346788899999988765322111 12333455555555555554
No 55
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=29.35 E-value=29 Score=26.44 Aligned_cols=22 Identities=5% Similarity=0.234 Sum_probs=16.1
Q ss_pred CeEEEeCCCCcEEEEEEeCccc
Q 021558 153 TRVALVDSDDNVVAILNDIEIY 174 (311)
Q Consensus 153 ~~vaL~~~eG~~vAiL~V~eiy 174 (311)
..+..+|.+|+++|+++..++.
T Consensus 100 ~~~pVvd~~g~~~Giit~~Dil 121 (129)
T 3jtf_A 100 HLAIVIDEHGGISGLVTMEDVL 121 (129)
T ss_dssp CEEEEECC-CCEEEEEEHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHH
Confidence 4455667679999999988764
No 56
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=29.32 E-value=1.2e+02 Score=24.87 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=28.7
Q ss_pred cceeeEEecCHHHHHhcCC-----C---CeEEEeCCCCcEEEEEEeC
Q 021558 133 MSVPIVLAIDDEQKRRIGE-----S---TRVALVDSDDNVVAILNDI 171 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~-----g---~~vaL~~~eG~~vAiL~V~ 171 (311)
+++|++.|.+.+.++.+.. | -...|+|++|++++...-.
T Consensus 91 ~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 91 IKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp CCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 3558888887777776654 2 4677889999999987543
No 57
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=29.29 E-value=1.4e+02 Score=29.15 Aligned_cols=45 Identities=24% Similarity=0.353 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHhcCCCceEEEeeCCC-CcchHHHHHHHHHHHHHHhc
Q 021558 229 LSPAQLRDEFSKRNADAVFAFQLRNP-VHNGHALLMTDTRRRLLEMG 274 (311)
Q Consensus 229 ltP~e~R~~f~~~Gw~~VvAFQTRNP-lHRaHe~L~k~~~~~ale~~ 274 (311)
....++++.++.+...-.+|||--.| +|-||---++ .++...+.|
T Consensus 19 ~~~e~L~~~L~~~~~~iy~G~dPTg~sLHLGhlv~l~-~l~~lQ~~G 64 (432)
T 2jan_A 19 TDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLL-TLRRFQRAG 64 (432)
T ss_dssp SCHHHHHHHHHHSCCEEEEEECCSSSSCBGGGHHHHH-HHHHHHHTT
T ss_pred CCHHHHHHHHcCCCCEEEEeeCCCCCCcCHHHHHHHH-HHHHHHHCC
Confidence 34678999998777777899994455 9999943333 334455555
No 58
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=28.02 E-value=29 Score=32.49 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=37.1
Q ss_pred CceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEE----ecc--cCC----CCCCCCChHHHHHHHHHH
Q 021558 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLL----HPL--GGY----TKADDVPLSWRMKQHEKV 306 (311)
Q Consensus 244 ~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~Lll----hPL--vG~----tK~dDvp~~vR~r~ye~l 306 (311)
..|++.=+-+-+|+||..|++.+.+.|-+.+. +.+++ ||. +.+ ...-=.+.+-|.+..+.+
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~--~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l 91 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLL--PIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE 91 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCC--CEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCC--ceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc
Confidence 46888889999999999999866555544432 22333 331 222 112244567777766653
No 59
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=26.93 E-value=1.2e+02 Score=24.13 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=26.7
Q ss_pred ceeeEEecCHHHHHhcCC--------CC-----eEEEeCCCCcEEEEEEeCcc
Q 021558 134 SVPIVLAIDDEQKRRIGE--------ST-----RVALVDSDDNVVAILNDIEI 173 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~--------g~-----~vaL~~~eG~~vAiL~V~ei 173 (311)
++|++.|.+.+.++.... |. .+-|+|++|+++..-...+.
T Consensus 88 ~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~ 140 (157)
T 4g2e_A 88 NFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDP 140 (157)
T ss_dssp CSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESST
T ss_pred cEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCC
Confidence 448888888877776542 11 24578999998876555443
No 60
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=24.64 E-value=1.7e+02 Score=24.51 Aligned_cols=37 Identities=11% Similarity=0.264 Sum_probs=27.6
Q ss_pred cceeeEEecCHHHHHhcCC--------CCeEEEeCCCCcEEEEEE
Q 021558 133 MSVPIVLAIDDEQKRRIGE--------STRVALVDSDDNVVAILN 169 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~--------g~~vaL~~~eG~~vAiL~ 169 (311)
+++|++.|.+.+.++.+.. --...|+|++|+++++..
T Consensus 112 ~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~ 156 (211)
T 2pn8_A 112 IRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITL 156 (211)
T ss_dssp CSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred CceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEe
Confidence 3558888887777776654 235678899999998874
No 61
>2ki8_A Tungsten formylmethanofuran dehydrogenase, subunit D (FWDD-2); beta-barrel, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=24.63 E-value=96 Score=25.33 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=24.3
Q ss_pred EecCHHHHH--hcCCCCeEEEeCCCCcEEEEEE
Q 021558 139 LAIDDEQKR--RIGESTRVALVDSDDNVVAILN 169 (311)
Q Consensus 139 L~v~~e~a~--~l~~g~~vaL~~~eG~~vAiL~ 169 (311)
+.++.++|+ .|+.||.|.+....|.+.+...
T Consensus 55 v~inp~dA~~lGI~dGd~V~V~s~~G~v~~~a~ 87 (146)
T 2ki8_A 55 AEINEEDWNALGLQEGDRVKVKTEFGEVVVFAK 87 (146)
T ss_dssp EEECHHHHHHHTCCTTCEEEEECSSCEEEEEEE
T ss_pred EEECHHHHHHcCCCCCCEEEEEeCCcEEEEEEe
Confidence 457777766 5679999999998898776665
No 62
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=24.51 E-value=23 Score=26.86 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=17.9
Q ss_pred CCeEEEeCCCCcEEEEEEeCccc
Q 021558 152 STRVALVDSDDNVVAILNDIEIY 174 (311)
Q Consensus 152 g~~vaL~~~eG~~vAiL~V~eiy 174 (311)
-..+..+|.+|+++|+++..++.
T Consensus 99 ~~~lpVvd~~g~~~Giit~~dll 121 (127)
T 3nqr_A 99 YHMAIVIDEFGGVSGLVTIEDIL 121 (127)
T ss_dssp CCEEEEECTTSCEEEEEEHHHHH
T ss_pred CeEEEEEeCCCCEEEEEEHHHHH
Confidence 34566677789999999988765
No 63
>1t62_A Conserved hypothetical protein; NYSGXRC, target T1587, unknown function, PSI, protein struct initiative; 3.00A {Enterococcus faecalis} SCOP: b.122.1.4
Probab=24.41 E-value=56 Score=28.08 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=22.7
Q ss_pred CCCCeEEEeCCCCcEEEEEEeCcccCC
Q 021558 150 GESTRVALVDSDDNVVAILNDIEIYKH 176 (311)
Q Consensus 150 ~~g~~vaL~~~eG~~vAiL~V~eiy~~ 176 (311)
++|+.-.+.|.+|++++++.+.+|...
T Consensus 67 ~vG~~~Ivld~~g~pvcii~tt~V~~~ 93 (166)
T 1t62_A 67 KAGQYDIILDGQSQPLAIIRTTKVEIM 93 (166)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEEEEEEEEE
Confidence 468888888889999999999887644
No 64
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii}
Probab=24.25 E-value=1.5e+02 Score=28.16 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHh-cCCCceEEEe-eCCCCcchHHHHHHHHHHHHHHhcCCCCcEEE---ecccCCCCCCCCChHHHHHH
Q 021558 229 LSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLL---HPLGGYTKADDVPLSWRMKQ 302 (311)
Q Consensus 229 ltP~e~R~~f~~-~Gw~~VvAFQ-TRNPlHRaHe~L~k~~~~~ale~~~~~~~Lll---hPLvG~tK~dDvp~~vR~r~ 302 (311)
.++.++++.+++ +..+-.+||| |. .+|-||..+.-.-++...+.|+++ .++| |-++|.....| +..+|-.+
T Consensus 19 ~~~~~l~~~l~~~~~~~vy~G~~PTg-~lHlG~yl~~l~~~~~lQ~~G~~~-~~~iaD~ha~~~~~~g~~-~e~i~~~~ 94 (375)
T 2cyc_A 19 LTVENLRHLFEIGAPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGIKT-RVFLADWHSWINDKLGGD-LEVIQEVA 94 (375)
T ss_dssp ETHHHHHHHHHHTCCCBEEEEECCCS-CCBHHHHHHHHHHHHHHHHTTCBC-EEEECHHHHHHTTGGGGC-HHHHHHHH
T ss_pred cCHHHHHHHHhcCCCcEEEeCCCCCC-CcCchHHHHHHHHHHHHHHCCCcE-EEEecCcEEEcCCCCCCC-HHHHHHHH
Confidence 457899999986 4566689999 65 899999554222234445555332 2332 34555321122 45555444
No 65
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=24.01 E-value=77 Score=24.61 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=22.6
Q ss_pred HHhcCCCCeEEEeCCCCcEEEEEEeCcccC
Q 021558 146 KRRIGESTRVALVDSDDNVVAILNDIEIYK 175 (311)
Q Consensus 146 a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~ 175 (311)
+..+.....+.++|.+|+++|+++..++.+
T Consensus 109 ~~~~~~~~~lpVvd~~g~~~Giit~~dil~ 138 (156)
T 3ctu_A 109 LHKLVDESFLPVVDAEGIFQGIITRKSILK 138 (156)
T ss_dssp HHHTTTSSEEEEECTTSBEEEEEETTHHHH
T ss_pred HHHHHHcCeEEEEcCCCeEEEEEEHHHHHH
Confidence 344544457888887899999999988764
No 66
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=24.00 E-value=1.7e+02 Score=28.06 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCCceEEEeeCCC-CcchHHHHHHHHHHHHHHhc
Q 021558 231 PAQLRDEFSKRNADAVFAFQLRNP-VHNGHALLMTDTRRRLLEMG 274 (311)
Q Consensus 231 P~e~R~~f~~~Gw~~VvAFQTRNP-lHRaHe~L~k~~~~~ale~~ 274 (311)
+.++++.++++...-.+|||.-.+ +|-||..-++ .++...+.|
T Consensus 53 ~e~l~~ll~~~~~~vy~G~dPTg~sLHlGhlv~l~-~l~~lQ~~G 96 (392)
T 1y42_X 53 KEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLM-PLFWMYLEG 96 (392)
T ss_dssp HHHHHHHHHHCCCEEEEEECCCSSSCBGGGHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHcCCCCEEEEeecCCCCCccHHHHHHHH-HHHHHHHcC
Confidence 567888888776677899994455 9999966443 234455555
No 67
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=23.96 E-value=1.9e+02 Score=24.73 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=27.9
Q ss_pred ceeeEEecCHHHHHhcCC----C---CeEEEeCCCCcEEEEEEe
Q 021558 134 SVPIVLAIDDEQKRRIGE----S---TRVALVDSDDNVVAILND 170 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~----g---~~vaL~~~eG~~vAiL~V 170 (311)
++|++.|.+.+.++.+.. | -...|+|++|++++...-
T Consensus 121 ~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 121 EFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp SSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEE
T ss_pred ceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEec
Confidence 458888887777777665 2 367788999999998654
No 68
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=23.79 E-value=1.4e+02 Score=22.60 Aligned_cols=41 Identities=12% Similarity=0.275 Sum_probs=27.9
Q ss_pred ceeeEEecCHHHHHhcCC--CCeEEEeCCCCcEEEEEEeCccc
Q 021558 134 SVPIVLAIDDEQKRRIGE--STRVALVDSDDNVVAILNDIEIY 174 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~--g~~vaL~~~eG~~vAiL~V~eiy 174 (311)
++|+..+.+.+.++.+.. --.+.|+|++|++++...-..-+
T Consensus 87 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~ 129 (154)
T 3kcm_A 87 TLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEW 129 (154)
T ss_dssp CCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCT
T ss_pred CeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCcc
Confidence 447788877766665543 23578889999999877644433
No 69
>4gqo_A LMO0859 protein; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: MSE PGE; 2.10A {Listeria monocytogenes}
Probab=23.67 E-value=1.2e+02 Score=27.48 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=43.7
Q ss_pred HhccCCeEEe--ChhhHHHHHHHHhCCcCCCCCCCChhhh------hhccccCCeecCCCCeeecceeeEEec-----CH
Q 021558 77 EAATLPRIRL--TKIDLQWVHVLSEGWASPLSGFMRESEF------LQTLHFNSLRLDDGSVVNMSVPIVLAI-----DD 143 (311)
Q Consensus 77 ea~~lpsi~l--~~~~l~dLelL~~G~fSPL~GFM~e~dy------~sVl~~~~mrL~dG~~~~~piPIvL~v-----~~ 143 (311)
.+.+.|.|.. +...+. ++...|++.||+.++...++ ..++ +.....||.. +.||+...+ +.
T Consensus 82 asg~~PDv~~~~~~~~~~--~~~~~g~l~~L~~~~~~~~~~~~~~~~~~~--~~~~~~dGk~--y~~P~~~~~~~l~Ynk 155 (433)
T 4gqo_A 82 ASKTAPTMSENINRSFAA--QLADSKAIVPLNDVKGLDDVVKERNMSETM--DSWKFSDGNQ--YVLPVYSNPILFAWRL 155 (433)
T ss_dssp HHTCCCSEEEEECHHHHH--HHHHTTSBCCGGGSTTHHHHHHHTTCHHHH--HHTCCTTSCC--CCEEEEEEECEEEECH
T ss_pred HCCCCCeEEEEcCHHHHH--HHHHCCCEEEChhhhcccchhhhhhhHHHH--HHhcccCCEE--EEEeccCceEEEEEeh
Confidence 4678998753 333332 46789999999999875543 3344 3556679998 678876543 66
Q ss_pred HHHHhc
Q 021558 144 EQKRRI 149 (311)
Q Consensus 144 e~a~~l 149 (311)
+..+++
T Consensus 156 dlf~~a 161 (433)
T 4gqo_A 156 DTLKEL 161 (433)
T ss_dssp HHHHHT
T ss_pred hhHHHc
Confidence 555443
No 70
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=23.28 E-value=1.9e+02 Score=25.62 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=54.7
Q ss_pred cceeeEEecCHHHHHhcCC--------CC-eEEEeCCCCcEEEEEEeCcccCCCHHHHHHHh--hCCCCCCChhHHHHHH
Q 021558 133 MSVPIVLAIDDEQKRRIGE--------ST-RVALVDSDDNVVAILNDIEIYKHPKEERIART--WGTTAPGLPYVDQAIT 201 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~--------g~-~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~V--fGT~d~~HPgV~~~~~ 201 (311)
+++|++.|.+.+.++.+.. +- .+-|+|++|++++++.-..-...+.++-.+.| ...++ .| ++.
T Consensus 96 i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~~~-~~-~~~---- 169 (249)
T 3a2v_A 96 IPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGD-SL-KRA---- 169 (249)
T ss_dssp CCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHH-HH-TCB----
T ss_pred CceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHhcc-cc-Ccc----
Confidence 4668999988887776653 22 36788999999998764433333443322221 00000 01 111
Q ss_pred hcCCEEEe----eeEEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEE
Q 021558 202 YAGNWLIG----GDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFA 248 (311)
Q Consensus 202 ~~g~~~vg----G~v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvA 248 (311)
.-.+| -+ |+=.++.++ .+-.|..+.|.+.|++.+--
T Consensus 170 ~Pa~W-~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 209 (249)
T 3a2v_A 170 VPADW-PNNEIIGEGLIVPPP----------TTEDQARARMESGQYRSLDW 209 (249)
T ss_dssp BCTTT-TSBTTTBTCEEECCC----------CSHHHHHHHHHHTCSEEEET
T ss_pred CCCCC-CCCCCCCCCeecCCC----------CCHHHHHHhcccCCCccccc
Confidence 23456 31 444444332 25678888897668876543
No 71
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=22.74 E-value=1.6e+02 Score=22.48 Aligned_cols=57 Identities=14% Similarity=0.022 Sum_probs=36.1
Q ss_pred eeeEEec---CHHHHHhcCC--CCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChh
Q 021558 135 VPIVLAI---DDEQKRRIGE--STRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPY 195 (311)
Q Consensus 135 iPIvL~v---~~e~a~~l~~--g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPg 195 (311)
+|++.+. +.+.++.+.. --.+.|+|++|++++...- ..+-++..+++-......||.
T Consensus 88 ~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~----~~~l~~~l~~l~~~~~~~~~~ 149 (152)
T 2lrn_A 88 WNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKELR----GDDLYNTVEKFVNGAKEGHHH 149 (152)
T ss_dssp SEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECCC----TTHHHHHHHHHHTSSSSCCSS
T ss_pred CeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeCC----HHHHHHHHHHHHhhccccccc
Confidence 3777776 4555555443 3467788899999887521 124455667777777776664
No 72
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=22.59 E-value=1.6e+02 Score=25.50 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=29.1
Q ss_pred cceeeEEecCHHHHHhcCCC--------CeEEEeCCCCcEEEEEEeC
Q 021558 133 MSVPIVLAIDDEQKRRIGES--------TRVALVDSDDNVVAILNDI 171 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~g--------~~vaL~~~eG~~vAiL~V~ 171 (311)
+++|++.|.+.+.++....- -..-|+|++|+++.+..-.
T Consensus 141 ~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~ 187 (240)
T 3qpm_A 141 MKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMND 187 (240)
T ss_dssp CSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecC
Confidence 46699999888877766532 3567899999999887543
No 73
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=22.46 E-value=2.4e+02 Score=21.80 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=25.2
Q ss_pred ceeeEEecCHHHHHhcCC--------------CCeEEEeCCCCcEEEEE
Q 021558 134 SVPIVLAIDDEQKRRIGE--------------STRVALVDSDDNVVAIL 168 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~--------------g~~vaL~~~eG~~vAiL 168 (311)
++|++.+.+.+.++.+.. --..-|+|++|+++.+.
T Consensus 93 ~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 93 AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE
T ss_pred CceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE
Confidence 447777777776666543 23477889999999876
No 74
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=22.43 E-value=1.8e+02 Score=22.89 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=28.6
Q ss_pred eeeEEe-cCHHHHHhcCC-----C---CeEEEeCCCCcEEEEEEeCcccC
Q 021558 135 VPIVLA-IDDEQKRRIGE-----S---TRVALVDSDDNVVAILNDIEIYK 175 (311)
Q Consensus 135 iPIvL~-v~~e~a~~l~~-----g---~~vaL~~~eG~~vAiL~V~eiy~ 175 (311)
+|+..| .+.+.++.+.. | -..-|+|++|++++...-.+.+.
T Consensus 100 ~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~ 149 (163)
T 1psq_A 100 AIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINS 149 (163)
T ss_dssp SEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTS
T ss_pred cEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCC
Confidence 377777 55666665543 2 47788999999999887655543
No 75
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=22.04 E-value=1.9e+02 Score=23.51 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=30.1
Q ss_pred cceeeEEecCHHHHHhcCCC-------CeEEEeCCCCcEEEEEEeCcccCCCHH
Q 021558 133 MSVPIVLAIDDEQKRRIGES-------TRVALVDSDDNVVAILNDIEIYKHPKE 179 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~g-------~~vaL~~~eG~~vAiL~V~eiy~~Dk~ 179 (311)
+++|++.+.+.+.++.+..- -.+.|+|++|++++...-..-...+.+
T Consensus 106 ~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ 159 (195)
T 2bmx_A 106 LPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVD 159 (195)
T ss_dssp CCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHH
T ss_pred CceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHH
Confidence 35588888776666655432 357788999999998754433333433
No 76
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=21.66 E-value=1.6e+02 Score=23.77 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=25.7
Q ss_pred ceeeEEecCHHHHHhcCCC--------------CeEEEeCCCCcEEEEE
Q 021558 134 SVPIVLAIDDEQKRRIGES--------------TRVALVDSDDNVVAIL 168 (311)
Q Consensus 134 piPIvL~v~~e~a~~l~~g--------------~~vaL~~~eG~~vAiL 168 (311)
++|++.|.+.+.++.+..- -..-|+|++|+++++.
T Consensus 109 ~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~ 157 (179)
T 3ixr_A 109 TFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW 157 (179)
T ss_dssp CSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE
T ss_pred ceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE
Confidence 4588888777777766431 2378899999999887
No 77
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=21.50 E-value=57 Score=26.17 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=21.8
Q ss_pred HHhcCCCCeEEEeCCCCcEEEEEEeCccc
Q 021558 146 KRRIGESTRVALVDSDDNVVAILNDIEIY 174 (311)
Q Consensus 146 a~~l~~g~~vaL~~~eG~~vAiL~V~eiy 174 (311)
++.+....-+..+|.+|+++|+++..|+.
T Consensus 109 ~~~m~~~~~lpVVd~~g~l~GiiT~~Dil 137 (156)
T 3k6e_A 109 LHKLVDESFLPVVDAEGIFQGIITRKSIL 137 (156)
T ss_dssp HHHTTTSSEEEEECTTSBEEEEEEHHHHH
T ss_pred HHHHHHcCCeEEEecCCEEEEEEEHHHHH
Confidence 34444455566788889999999999876
No 78
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=20.95 E-value=2.2e+02 Score=22.32 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=29.5
Q ss_pred ceeeEEec-CHHHHHhcCC--------CCeEEEeCCCCcEEEEEEeCcccC
Q 021558 134 SVPIVLAI-DDEQKRRIGE--------STRVALVDSDDNVVAILNDIEIYK 175 (311)
Q Consensus 134 piPIvL~v-~~e~a~~l~~--------g~~vaL~~~eG~~vAiL~V~eiy~ 175 (311)
++|++.|. +.+.++.... .-..-|+|++|+++..-...+...
T Consensus 102 ~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~ 152 (166)
T 3p7x_A 102 NVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTD 152 (166)
T ss_dssp SCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTS
T ss_pred ceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCccc
Confidence 34888888 6666665543 346778999999999876665543
No 79
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=20.78 E-value=2e+02 Score=25.29 Aligned_cols=47 Identities=9% Similarity=0.157 Sum_probs=32.2
Q ss_pred cceeeEEecCHHHHHhcCC--------CCeEEEeCCCCcEEEEEEeCcccCCCHH
Q 021558 133 MSVPIVLAIDDEQKRRIGE--------STRVALVDSDDNVVAILNDIEIYKHPKE 179 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~--------g~~vaL~~~eG~~vAiL~V~eiy~~Dk~ 179 (311)
+++|++.|.+.+.++.+.. --.+-|+|++|+++.+..-..-...+-+
T Consensus 155 ~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~ 209 (254)
T 3tjj_A 155 IRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVD 209 (254)
T ss_dssp CSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHH
T ss_pred cccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHH
Confidence 4669999988887776654 1357789999999998764433333333
No 80
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=20.52 E-value=1.5e+02 Score=23.76 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=27.1
Q ss_pred cceeeEEecCHHHHHhcCCC--------CeEEEeCCCCcEEEEEEeC
Q 021558 133 MSVPIVLAIDDEQKRRIGES--------TRVALVDSDDNVVAILNDI 171 (311)
Q Consensus 133 ~piPIvL~v~~e~a~~l~~g--------~~vaL~~~eG~~vAiL~V~ 171 (311)
+++|+..+.+.+.++.++.- -.+.|+|++|++++...-.
T Consensus 92 ~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 92 IEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp CCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecC
Confidence 34577777776666665532 3577889999999987543
No 81
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=20.04 E-value=77 Score=29.97 Aligned_cols=50 Identities=14% Similarity=0.033 Sum_probs=33.3
Q ss_pred eeCCCCcchHHHHHHHHHHHHHHhcCCCC-cEEEecccC-----CCC---CCCCChHHHHHHHHHH
Q 021558 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNP-ILLLHPLGG-----YTK---ADDVPLSWRMKQHEKV 306 (311)
Q Consensus 250 QTRNPlHRaHe~L~k~~~~~ale~~~~~~-~LllhPLvG-----~tK---~dDvp~~vR~r~ye~l 306 (311)
=+-+|+|.||..+++ +|.+.+ + .-||.-+.. ..| .-=++.+-|+++.+++
T Consensus 205 GsFD~~h~GHl~~L~----rA~~l~---D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~ 263 (341)
T 3elb_A 205 GAFDLFHIGHVDFLE----KVHRLA---ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLAC 263 (341)
T ss_dssp ECCTTCCHHHHHHHH----HHHTTS---SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTB
T ss_pred cccCCCCHHHHHHHH----HHHHhC---CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHc
Confidence 399999999999986 566774 3 123322222 223 2468999999988763
Done!