Query 021562
Match_columns 311
No_of_seqs 83 out of 109
Neff 2.4
Searched_HMMs 29240
Date Mon Mar 25 05:56:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qqy_A Sigma B operon; dodecam 96.8 0.0021 7.2E-08 49.3 5.9 141 135-281 7-148 (149)
2 2fzf_A Hypothetical protein; s 96.7 0.0023 7.8E-08 52.0 5.9 126 139-276 21-160 (175)
3 2oh3_A Rubrerythrin, COG1633: 96.6 0.0025 8.7E-08 51.7 5.4 132 139-276 6-148 (167)
4 1vjx_A Putative ferritin-like 96.5 0.0025 8.4E-08 51.6 4.6 126 139-275 15-154 (157)
5 1mxr_A Ribonucleotide reductas 96.0 0.004 1.4E-07 57.9 3.7 135 134-271 188-350 (375)
6 1nfv_A Bacterioferritin; 24 su 95.9 0.017 5.7E-07 46.7 6.5 137 135-276 8-145 (179)
7 2y3q_A Bacterioferritin; metal 95.5 0.023 7.9E-07 44.2 5.8 135 137-276 5-140 (158)
8 3qb9_A Bacterioferritin, BFR; 94.8 0.052 1.8E-06 43.5 6.0 135 137-276 7-142 (174)
9 1jgc_A Bacterioferritin, BFR; 94.6 0.036 1.2E-06 43.2 4.4 135 137-276 5-140 (161)
10 2fkz_A Bacterioferritin; ferro 94.5 0.061 2.1E-06 41.4 5.4 134 137-276 5-140 (155)
11 3uoi_A Bacterioferritin, BFR; 93.6 0.074 2.5E-06 41.8 4.4 134 137-276 7-142 (161)
12 1zpy_A Hypothetical protein NE 92.9 0.046 1.6E-06 44.0 2.3 67 126-196 8-74 (95)
13 1jk0_B RNR Y4, ribonucleoside- 92.1 0.098 3.3E-06 48.4 3.7 112 151-272 191-318 (345)
14 1jk0_A RNR Y2, ribonucleoside- 91.8 0.61 2.1E-05 44.7 8.9 111 151-271 263-390 (419)
15 2rcc_A Ribonucleoside-diphosph 91.8 0.085 2.9E-06 48.3 2.9 130 137-271 173-328 (346)
16 2vzb_A Putative bacterioferrit 91.4 0.44 1.5E-05 37.4 6.3 136 136-276 15-159 (170)
17 1syy_A Ribonucleoside-diphosph 91.4 0.15 5E-06 46.9 4.0 131 136-271 178-332 (346)
18 4am5_A Bacterioferritin; metal 91.4 0.32 1.1E-05 39.0 5.5 134 137-275 5-139 (159)
19 2c41_A DPS family DNA-binding 91.4 0.38 1.3E-05 38.5 5.9 148 130-282 2-158 (158)
20 2e0z_A Virus-like particle; ba 91.2 0.039 1.3E-06 51.9 0.0 56 137-194 18-73 (345)
21 1vjx_A Putative ferritin-like 90.8 0.15 5E-06 41.1 3.0 55 139-195 101-155 (157)
22 4dr0_A Ribonucleoside-diphosph 90.6 0.23 8E-06 46.1 4.6 126 130-271 165-322 (350)
23 2vxx_A Starvation induced DNA 90.4 0.63 2.1E-05 38.7 6.6 149 129-280 19-175 (192)
24 3pvt_A Phenylacetic acid degra 90.1 0.18 6.1E-06 47.0 3.4 152 129-292 23-193 (311)
25 4etr_A Putative uncharacterize 90.0 0.21 7.1E-06 40.7 3.3 72 129-202 2-73 (153)
26 2o1z_A Ribonucleotide reductas 90.0 0.11 3.7E-06 47.5 1.7 44 151-196 196-239 (311)
27 3gvy_A Bacterioferritin; iron 89.8 0.68 2.3E-05 36.3 6.0 133 138-276 6-140 (161)
28 3k6c_A Uncharacterized protein 89.5 0.14 4.8E-06 41.3 1.9 65 127-195 9-73 (95)
29 3ee4_A Probable ribonucleoside 89.2 0.12 4.2E-06 47.4 1.5 42 151-194 181-223 (323)
30 3pf7_A Benzoyl-COA oxygenase c 89.0 0.16 5.6E-06 50.4 2.3 130 127-267 97-244 (481)
31 1h0o_A Ribonucleoside-diphosph 88.9 0.54 1.9E-05 44.5 5.8 43 151-195 238-280 (390)
32 3fvb_A Bacterioferritin; niaid 88.8 0.61 2.1E-05 38.3 5.3 135 136-276 25-161 (182)
33 2oh3_A Rubrerythrin, COG1633: 88.6 0.28 9.7E-06 39.6 3.1 54 139-194 94-147 (167)
34 1j30_A 144AA long hypothetical 88.5 0.72 2.5E-05 36.6 5.4 126 139-275 9-138 (144)
35 3pwf_A Rubrerythrin; non heme 88.3 0.3 1E-05 41.4 3.2 117 140-276 8-126 (170)
36 2p1i_A Ribonucleotide reductas 87.8 0.18 6.3E-06 46.6 1.7 111 151-271 197-323 (349)
37 3mjo_A Ribonucleotide reductas 87.2 0.22 7.6E-06 45.0 1.9 37 151-189 172-208 (296)
38 4di0_A Rubrerythrin; ssgcid, s 87.1 0.12 4.2E-06 42.5 0.1 123 139-275 13-140 (144)
39 1za0_A Possible acyl-[acyl-car 86.9 0.24 8.3E-06 45.5 1.9 45 148-194 157-201 (275)
40 3dhz_A Ribonucleotide reductas 86.4 0.25 8.7E-06 45.3 1.8 109 151-271 173-308 (329)
41 3n37_A Ribonucleoside-diphosph 86.2 0.27 9.1E-06 44.9 1.8 109 151-271 163-298 (319)
42 1yuz_A Nigerythrin; rubrythrin 85.3 1.1 3.8E-05 38.7 5.2 131 140-276 30-162 (202)
43 3ee4_A Probable ribonucleoside 84.1 1.7 6E-05 39.8 6.2 68 126-198 53-126 (323)
44 4a58_A Ribonucleoside-diphosph 83.5 0.41 1.4E-05 44.0 1.8 39 151-191 181-219 (324)
45 1krq_A Ferritin; H-chain like 83.3 2.6 8.9E-05 34.3 6.3 135 138-276 5-140 (167)
46 2fzf_A Hypothetical protein; s 83.2 0.68 2.3E-05 37.4 2.8 55 139-195 106-160 (175)
47 3r2k_A Bacterioferritin, BFR; 82.8 2.9 0.0001 32.5 6.2 132 137-276 5-140 (154)
48 2uw1_A Desaturase, plastid del 82.3 0.47 1.6E-05 45.1 1.7 45 150-194 171-216 (338)
49 3olj_A Ribonucleoside-diphosph 78.9 0.77 2.6E-05 41.2 1.8 49 142-194 166-214 (286)
50 1eum_A Ferritin 1; ECFTNA, met 78.1 5 0.00017 32.4 6.3 135 138-276 5-140 (165)
51 2jd6_0 Ferritin homolog, ferri 77.8 5.2 0.00018 32.0 6.3 135 138-276 5-140 (174)
52 2r2i_A Guanylyl cyclase-activa 77.1 5.7 0.0002 30.9 6.2 75 100-177 88-169 (198)
53 1za0_A Possible acyl-[acyl-car 75.4 1 3.4E-05 41.5 1.6 165 98-276 18-202 (275)
54 3e3r_A Calcyphosin, calcyphosi 74.6 11 0.00038 29.0 7.2 71 94-166 67-137 (204)
55 4di0_A Rubrerythrin; ssgcid, s 74.5 1.5 5.3E-05 35.9 2.3 56 140-195 84-141 (144)
56 1g8i_A Frequenin, neuronal cal 73.7 3.9 0.00013 31.2 4.3 65 112-177 109-185 (190)
57 2ggz_A Guanylyl cyclase-activa 73.6 7 0.00024 31.1 5.9 64 112-176 103-172 (211)
58 2uw1_A Desaturase, plastid del 73.2 1.5 5E-05 41.7 2.1 55 230-284 85-143 (338)
59 2hz8_A De novo designed DIIRON 72.6 0.58 2E-05 38.7 -0.6 68 125-194 19-86 (115)
60 1s3q_A Ferritin; ferroxidase, 72.6 5.4 0.00018 32.9 5.2 136 137-276 6-142 (173)
61 3oj5_A Ferritin family protein 72.3 6.3 0.00021 32.4 5.5 135 138-276 10-145 (189)
62 1jfj_A Ehcabp, calcium-binding 72.3 13 0.00045 25.9 6.5 85 94-181 30-119 (134)
63 1fpw_A Yeast frequenin, calciu 72.1 8.7 0.0003 29.2 5.9 65 112-177 109-185 (190)
64 2ovk_B RLC, myosin regulatory 71.9 6.5 0.00022 29.0 5.0 93 99-198 12-116 (153)
65 2l4h_A Calcium and integrin-bi 70.3 12 0.00041 30.4 6.8 64 112-176 139-211 (214)
66 1jba_A GCAP-2, protein (guanyl 69.9 10 0.00035 29.6 6.0 65 112-177 105-186 (204)
67 2o1z_A Ribonucleotide reductas 69.7 6.6 0.00023 35.7 5.6 143 126-276 74-238 (311)
68 2l2e_A Calcium-binding protein 68.6 12 0.00041 28.6 6.0 30 147-177 156-185 (190)
69 3bvf_A Ferritin; iron storage, 68.6 7.5 0.00026 32.1 5.2 122 137-262 18-140 (181)
70 1wdc_B Scallop myosin; calcium 68.3 5.1 0.00017 29.6 3.8 53 112-165 97-149 (156)
71 3qhb_A Symerythrin, ORF180; fo 68.3 0.75 2.6E-05 39.8 -0.9 149 112-276 3-174 (179)
72 3qhb_A Symerythrin, ORF180; fo 68.1 2.1 7.3E-05 37.0 1.9 61 135-195 112-174 (179)
73 2ehb_A Calcineurin B-like prot 67.6 16 0.00055 28.5 6.7 65 112-177 121-193 (207)
74 2l2e_A Calcium-binding protein 66.7 10 0.00035 28.9 5.3 63 101-165 64-126 (190)
75 1jfj_A Ehcabp, calcium-binding 65.9 6.2 0.00021 27.6 3.7 70 112-181 10-87 (134)
76 1s6c_A KV4 potassium channel-i 65.1 9.7 0.00033 28.9 4.9 65 112-177 102-178 (183)
77 3fwb_A Cell division control p 64.5 9.4 0.00032 27.9 4.5 89 99-190 19-114 (161)
78 3pwf_A Rubrerythrin; non heme 64.0 2.8 9.7E-05 35.4 1.8 61 141-201 70-132 (170)
79 2zfd_A Calcineurin B-like prot 63.3 22 0.00075 28.7 6.9 65 112-177 132-204 (226)
80 2jjz_A Ionized calcium-binding 61.4 8.5 0.00029 29.7 4.0 80 100-181 50-129 (150)
81 3ox6_A Calcium-binding protein 61.2 7.4 0.00025 28.0 3.4 87 101-190 9-106 (153)
82 1gjy_A Sorcin, CP-22, V19; cal 60.7 8.4 0.00029 29.1 3.8 75 112-192 82-156 (167)
83 1juo_A Sorcin; calcium-binding 60.5 6.9 0.00024 30.7 3.4 91 96-192 89-187 (198)
84 2jul_A Calsenilin; EF-hand, ca 60.4 10 0.00035 31.4 4.5 99 81-181 110-225 (256)
85 2bl0_B Myosin regulatory light 60.2 21 0.00072 25.5 5.7 83 99-190 4-94 (145)
86 3olj_A Ribonucleoside-diphosph 60.1 14 0.00048 33.0 5.7 143 126-276 50-215 (286)
87 3qrx_A Centrin; calcium-bindin 60.0 9 0.00031 28.5 3.8 86 94-181 58-149 (169)
88 1y1x_A Leishmania major homolo 59.7 26 0.00089 27.4 6.6 62 96-165 59-120 (191)
89 3qrx_A Centrin; calcium-bindin 59.2 9.6 0.00033 28.3 3.8 77 112-191 38-120 (169)
90 3j04_B Myosin regulatory light 59.0 11 0.00036 27.3 4.0 66 98-165 74-139 (143)
91 2znd_A Programmed cell death p 58.3 11 0.00039 28.4 4.2 76 112-191 84-159 (172)
92 1wy9_A Allograft inflammatory 58.0 4.6 0.00016 31.2 2.0 81 100-182 48-128 (147)
93 1dgu_A Calcium-saturated CIB; 56.9 15 0.00053 28.0 4.7 63 112-175 108-179 (183)
94 1j30_A 144AA long hypothetical 56.4 5.5 0.00019 31.5 2.2 58 139-196 81-140 (144)
95 1bjf_A Neurocalcin delta; calc 56.4 23 0.0008 26.9 5.7 63 112-175 109-183 (193)
96 4ds7_A Calmodulin, CAM; protei 55.9 11 0.00039 26.9 3.6 84 94-179 41-130 (147)
97 1k94_A Grancalcin; penta-EF-ha 55.4 31 0.0011 25.8 6.1 74 112-191 80-153 (165)
98 2f33_A Calbindin; EF-hand, Ca2 55.3 30 0.001 27.5 6.3 87 100-191 16-122 (263)
99 2ehb_A Calcineurin B-like prot 55.2 27 0.00091 27.2 5.9 81 100-181 34-123 (207)
100 2v2p_A Ferritin light chain; m 54.9 19 0.00066 29.5 5.3 135 138-275 11-149 (174)
101 2aao_A CDPK, calcium-dependent 54.7 19 0.00066 26.5 4.8 70 94-165 57-126 (166)
102 2be4_A Hypothetical protein LO 54.6 24 0.00083 28.2 5.7 88 98-190 9-122 (272)
103 1rcd_A L ferritin; iron storag 54.2 20 0.00069 29.4 5.3 136 137-275 11-150 (173)
104 1k9u_A Polcalcin PHL P 7; poll 54.1 7 0.00024 26.1 2.1 62 101-165 4-65 (78)
105 2mys_C Myosin; muscle protein, 53.9 36 0.0012 24.3 6.0 72 94-166 38-113 (149)
106 2ovk_B RLC, myosin regulatory 52.0 12 0.00041 27.5 3.3 16 149-164 96-111 (153)
107 3sjs_A URE3-BP sequence specif 50.9 13 0.00044 30.4 3.6 128 101-242 49-182 (220)
108 1s6c_A KV4 potassium channel-i 50.5 24 0.00083 26.6 4.9 65 98-164 54-118 (183)
109 3dd4_A KV channel-interacting 50.5 14 0.00047 30.2 3.7 26 150-176 198-223 (229)
110 3h4s_E KCBP interacting Ca2+-b 50.2 14 0.00047 27.9 3.4 73 99-173 39-112 (135)
111 2jnf_A Troponin C; stretch act 50.1 34 0.0012 25.0 5.5 87 101-190 11-109 (158)
112 2jul_A Calsenilin; EF-hand, ca 49.7 18 0.00062 29.9 4.4 85 96-181 87-177 (256)
113 2cih_A Ferritin heavy chain; a 49.7 25 0.00087 29.2 5.3 135 137-274 15-153 (183)
114 3i5g_B Myosin regulatory light 48.6 28 0.00096 27.0 5.1 69 112-181 26-97 (153)
115 3qz3_A Ferritin; structural ge 48.5 25 0.00085 29.4 5.1 140 127-274 7-147 (184)
116 2bl0_B Myosin regulatory light 48.4 29 0.00098 24.8 4.8 83 94-181 35-124 (145)
117 1y1x_A Leishmania major homolo 47.7 38 0.0013 26.4 5.8 94 96-193 79-180 (191)
118 3khe_A Calmodulin-like domain 47.1 23 0.00079 26.8 4.3 76 112-190 50-141 (191)
119 1s1e_A KV channel interacting 46.6 34 0.0012 27.8 5.5 83 97-180 48-136 (224)
120 4ds7_A Calmodulin, CAM; protei 46.0 23 0.0008 25.2 3.9 81 101-181 9-96 (147)
121 2lw1_A ABC transporter ATP-bin 45.4 15 0.0005 27.8 2.9 26 63-88 36-61 (89)
122 2opo_A Polcalcin CHE A 3; calc 45.4 43 0.0015 22.5 5.1 65 100-167 11-75 (86)
123 2mys_B Myosin; muscle protein, 45.0 39 0.0013 25.1 5.2 33 148-180 105-142 (166)
124 2r2i_A Guanylyl cyclase-activa 45.0 44 0.0015 25.8 5.7 64 100-165 52-115 (198)
125 2obh_A Centrin-2; DNA repair c 44.9 35 0.0012 25.1 4.9 65 94-165 36-106 (143)
126 2a9u_A Ubiquitin carboxyl-term 44.7 4 0.00014 34.2 -0.4 23 229-251 63-85 (144)
127 1s1e_A KV channel interacting 44.0 43 0.0015 27.2 5.7 63 100-164 89-151 (224)
128 2qqy_A Sigma B operon; dodecam 43.8 15 0.00052 27.6 2.8 61 139-199 86-147 (149)
129 2ggz_A Guanylyl cyclase-activa 43.5 38 0.0013 26.8 5.2 64 100-165 57-120 (211)
130 2f2o_A Calmodulin fused with c 43.4 29 0.00098 26.0 4.3 14 150-163 96-109 (179)
131 1alv_A Calpain, S-camld; calci 43.2 50 0.0017 24.9 5.6 76 112-192 87-162 (173)
132 3fwb_A Cell division control p 42.4 23 0.00079 25.8 3.5 82 93-181 52-144 (161)
133 1dtl_A Cardiac troponin C; hel 42.3 59 0.002 23.6 5.8 71 94-166 49-123 (161)
134 1tjo_A Iron-rich DPSA-homolog 42.3 75 0.0026 26.1 7.0 149 129-280 20-176 (182)
135 1wdc_C Scallop myosin; calcium 42.2 23 0.00078 26.0 3.5 15 150-164 134-148 (156)
136 3ox6_A Calcium-binding protein 41.9 34 0.0012 24.4 4.3 81 94-181 41-137 (153)
137 3dtp_E RLC, myosin regulatory 41.9 33 0.0011 26.9 4.6 82 101-191 58-145 (196)
138 2mys_B Myosin; muscle protein, 41.5 40 0.0014 25.0 4.8 37 152-191 72-114 (166)
139 3bjd_A Putative 3-oxoacyl-(acy 41.4 9.8 0.00033 34.7 1.6 97 180-279 188-297 (332)
140 2i7a_A Calpain 13; calcium-dep 41.3 55 0.0019 26.1 5.9 67 112-181 86-156 (174)
141 4g5o_E G-protein-signaling mod 41.2 6.5 0.00022 25.2 0.3 16 267-282 2-17 (26)
142 3dtp_E RLC, myosin regulatory 41.1 31 0.0011 27.1 4.3 33 148-181 136-173 (196)
143 1n1q_A DPS protein; four-helix 41.1 80 0.0028 24.4 6.6 138 132-274 2-148 (149)
144 2f2o_A Calmodulin fused with c 40.6 78 0.0027 23.6 6.3 9 170-178 85-93 (179)
145 1bjf_A Neurocalcin delta; calc 40.6 64 0.0022 24.4 5.9 63 100-164 63-125 (193)
146 2xze_A STAM-binding protein; h 40.4 10 0.00035 31.3 1.5 22 229-250 61-83 (146)
147 1fpw_A Yeast frequenin, calciu 40.3 24 0.00082 26.7 3.4 85 96-181 21-111 (190)
148 1c7v_A CAVP, calcium vector pr 40.2 28 0.00096 23.2 3.4 67 98-167 7-74 (81)
149 1jk0_A RNR Y2, ribonucleoside- 40.2 29 0.00098 33.3 4.7 143 126-276 140-306 (419)
150 1k94_A Grancalcin; penta-EF-ha 39.9 53 0.0018 24.5 5.3 62 96-165 36-97 (165)
151 2aao_A CDPK, calcium-dependent 39.7 55 0.0019 24.0 5.3 76 112-190 37-117 (166)
152 1top_A Troponin C; contractIle 39.1 38 0.0013 24.6 4.3 81 101-181 18-108 (162)
153 1djx_A PLC-D1, phosphoinositid 39.0 16 0.00054 36.1 2.8 102 94-203 41-158 (624)
154 3khe_A Calmodulin-like domain 38.7 17 0.00057 27.6 2.3 81 99-181 86-169 (191)
155 1dtl_A Cardiac troponin C; hel 38.7 44 0.0015 24.4 4.5 76 112-190 28-113 (161)
156 2bl0_C Myosin regulatory light 38.5 26 0.0009 25.1 3.2 39 143-181 47-91 (142)
157 3dd4_A KV channel-interacting 38.3 41 0.0014 27.4 4.7 63 99-162 63-126 (229)
158 3pm8_A PFCDPK2, calcium-depend 38.1 43 0.0015 26.5 4.7 89 99-190 53-147 (197)
159 2pvb_A Protein (parvalbumin); 37.9 68 0.0023 22.4 5.3 75 97-180 6-91 (108)
160 1s6i_A CDPK, calcium-dependent 37.8 24 0.00083 27.7 3.2 80 95-181 41-128 (188)
161 1g8i_A Frequenin, neuronal cal 37.8 31 0.001 26.2 3.7 16 148-163 109-124 (190)
162 1gjy_A Sorcin, CP-22, V19; cal 37.6 76 0.0026 23.7 5.9 63 96-166 38-100 (167)
163 3chh_A P-aminobenzoate N-oxyge 37.4 24 0.00081 32.9 3.5 59 136-195 182-240 (336)
164 2blf_B SORB, sulfite\:cytochro 37.1 50 0.0017 23.9 4.6 34 98-145 46-79 (81)
165 2mys_C Myosin; muscle protein, 37.1 68 0.0023 22.8 5.3 69 112-181 18-97 (149)
166 2itb_A TRNA-(MS(2)IO(6)A)-hydr 37.1 50 0.0017 29.6 5.4 98 97-197 66-168 (206)
167 1lko_A Rubrerythrin all-iron(I 37.1 24 0.00083 29.8 3.3 132 138-276 8-141 (191)
168 3fs7_A Parvalbumin, thymic; ca 36.9 65 0.0022 22.5 5.1 78 95-181 5-93 (109)
169 2d8n_A Recoverin; structural g 36.2 23 0.00079 27.5 2.8 17 148-164 117-133 (207)
170 2zfd_A Calcineurin B-like prot 36.2 56 0.0019 26.2 5.2 87 100-190 45-140 (226)
171 1rro_A RAT oncomodulin; calciu 36.0 86 0.0029 21.8 5.6 62 96-166 5-69 (108)
172 1top_A Troponin C; contractIle 35.4 45 0.0015 24.2 4.1 86 94-181 50-144 (162)
173 3uno_A Probable bacterioferrit 35.1 50 0.0017 27.9 4.9 135 137-275 9-144 (189)
174 2ovk_C Myosin catalytic light 34.0 46 0.0016 24.5 4.0 64 100-165 85-150 (159)
175 2yuk_A Myeloid/lymphoid or mix 34.0 14 0.00046 28.8 1.1 32 151-182 27-66 (90)
176 1w7j_B Myosin light chain 1; m 33.6 24 0.00082 25.6 2.4 76 112-190 20-105 (151)
177 2lmt_A Calmodulin-related prot 33.4 38 0.0013 25.3 3.5 70 112-181 20-95 (148)
178 1tiz_A Calmodulin-related prot 32.9 34 0.0012 21.6 2.8 24 141-164 40-63 (67)
179 2clb_A DPS-like protein; DI-ir 32.5 51 0.0018 27.3 4.5 140 136-279 23-172 (188)
180 1jba_A GCAP-2, protein (guanyl 32.5 79 0.0027 24.5 5.3 83 98-181 20-107 (204)
181 2bl0_C Myosin regulatory light 32.4 43 0.0015 24.0 3.5 84 94-179 36-125 (142)
182 2kz2_A Calmodulin, CAM; TR2C, 31.6 53 0.0018 23.3 3.9 65 98-164 27-91 (94)
183 2hpk_A Photoprotein berovin; s 30.9 1.4E+02 0.0048 23.1 6.5 68 96-165 70-155 (208)
184 2lhi_A Calmodulin, serine/thre 30.8 63 0.0021 25.5 4.6 15 149-163 95-109 (176)
185 1m45_A MLC1P, myosin light cha 30.8 42 0.0014 24.2 3.3 64 96-165 36-110 (148)
186 2jjz_A Ionized calcium-binding 30.5 56 0.0019 25.0 4.1 45 95-141 81-125 (150)
187 1exr_A Calmodulin; high resolu 30.4 50 0.0017 24.1 3.7 81 94-181 40-131 (148)
188 3pm8_A PFCDPK2, calcium-depend 30.4 20 0.00067 28.5 1.5 66 100-167 93-158 (197)
189 3u0k_A Rcamp; fluorescent prot 30.3 97 0.0033 30.3 6.6 65 94-165 332-402 (440)
190 2d58_A Allograft inflammatory 29.9 48 0.0016 23.7 3.4 63 112-174 42-105 (107)
191 3e3r_A Calcyphosin, calcyphosi 29.8 63 0.0021 24.7 4.3 76 112-190 47-127 (204)
192 1rwy_A Parvalbumin alpha; EF-h 29.7 66 0.0023 22.4 4.1 18 148-165 51-68 (109)
193 3r0s_A Acyl-[acyl-carrier-prot 29.7 51 0.0018 28.2 4.1 47 98-146 207-253 (266)
194 3mse_B Calcium-dependent prote 29.5 70 0.0024 24.5 4.5 75 100-181 73-154 (180)
195 2sas_A Sarcoplasmic calcium-bi 29.3 1.1E+02 0.0037 22.6 5.4 39 140-178 107-148 (185)
196 1bu3_A Calcium-binding protein 28.9 70 0.0024 22.3 4.1 78 95-181 5-93 (109)
197 1ji5_A DLP-1; dodecamer, four- 28.6 1.1E+02 0.0038 23.2 5.5 130 140-274 3-141 (142)
198 2rcc_A Ribonucleoside-diphosph 28.6 70 0.0024 29.1 5.0 149 126-280 65-241 (346)
199 1wdc_C Scallop myosin; calcium 28.5 67 0.0023 23.4 4.1 84 101-190 10-102 (156)
200 2qac_A Myosin A tail domain in 28.4 66 0.0022 23.3 4.0 74 94-178 45-129 (146)
201 2f33_A Calbindin; EF-hand, Ca2 28.3 1.7E+02 0.0058 23.0 6.7 76 112-190 113-209 (263)
202 1pva_A Parvalbumin; calcium bi 28.3 1.1E+02 0.0038 21.2 5.1 76 96-181 6-93 (110)
203 1vlg_A Ferritin; TM1128, struc 28.0 62 0.0021 26.1 4.2 135 136-274 17-152 (176)
204 1m45_A MLC1P, myosin light cha 28.0 40 0.0014 24.3 2.7 53 112-164 93-145 (148)
205 3n37_A Ribonucleoside-diphosph 28.0 56 0.0019 29.6 4.3 141 125-273 42-202 (319)
206 3mjo_A Ribonucleotide reductas 27.5 55 0.0019 29.4 4.1 140 126-273 52-211 (296)
207 2lmt_A Calmodulin-related prot 27.4 63 0.0022 24.0 3.9 81 94-181 40-131 (148)
208 2d8n_A Recoverin; structural g 27.2 1.1E+02 0.0037 23.7 5.3 84 97-181 30-119 (207)
209 3uoi_A Bacterioferritin, BFR; 26.7 34 0.0011 26.5 2.3 59 139-197 85-144 (161)
210 3dhz_A Ribonucleotide reductas 26.4 55 0.0019 29.9 4.0 141 125-273 52-212 (329)
211 3dka_A DINB-like protein; DINB 26.4 45 0.0015 25.0 2.8 32 169-200 116-147 (155)
212 2qac_A Myosin A tail domain in 26.2 59 0.002 23.5 3.4 13 169-181 84-96 (146)
213 2gs4_A Protein YCIF; stress pr 26.2 58 0.002 27.4 3.8 65 134-200 5-70 (166)
214 1ggw_A Protein (CDC4P); light 26.1 45 0.0016 23.9 2.7 38 150-190 49-94 (140)
215 2jnf_A Troponin C; stretch act 26.0 37 0.0013 24.8 2.3 17 94-110 64-80 (158)
216 3ll8_B Calcineurin subunit B t 25.8 1.8E+02 0.0063 20.7 7.8 17 148-164 85-101 (155)
217 2y3q_A Bacterioferritin; metal 25.7 39 0.0013 25.8 2.4 58 139-196 83-141 (158)
218 2lhi_A Calmodulin, serine/thre 25.7 26 0.00088 27.7 1.5 77 112-191 21-103 (176)
219 1nfv_A Bacterioferritin; 24 su 25.6 41 0.0014 26.7 2.6 58 139-196 88-146 (179)
220 1jig_A DLP-2; dodecamer, four- 25.6 1.4E+02 0.0049 22.8 5.7 135 135-274 2-145 (146)
221 1juo_A Sorcin; calcium-binding 25.5 76 0.0026 24.6 4.1 60 98-165 71-130 (198)
222 2i7a_A Calpain 13; calcium-dep 25.3 58 0.002 26.0 3.5 61 96-165 42-102 (174)
223 3gvy_A Bacterioferritin; iron 25.1 31 0.0011 26.8 1.8 59 139-197 83-142 (161)
224 2ktg_A Calmodulin, putative; e 24.9 1E+02 0.0036 20.4 4.3 53 112-164 24-76 (85)
225 3nyv_A Calmodulin-domain prote 24.6 60 0.002 29.1 3.8 79 99-179 381-462 (484)
226 3h4s_E KCBP interacting Ca2+-b 24.5 67 0.0023 24.0 3.5 34 96-131 73-106 (135)
227 3ll8_B Calcineurin subunit B t 24.4 1.1E+02 0.0037 22.0 4.5 81 101-190 4-93 (155)
228 1utg_A Uteroglobin; steroid bi 24.3 60 0.002 23.9 3.1 48 98-149 17-66 (70)
229 3li6_A Calcium-binding protein 24.3 62 0.0021 20.4 2.9 25 140-164 38-62 (66)
230 4g5s_E PINS homolog, G-protein 24.2 27 0.00093 22.5 1.0 16 267-282 2-17 (26)
231 2gyq_A YCFI, putative structur 24.1 61 0.0021 27.4 3.6 64 134-199 12-75 (173)
232 1i11_A Transcription factor SO 24.1 24 0.00083 25.3 0.9 14 239-252 64-77 (81)
233 2joj_A Centrin protein; N-term 23.9 88 0.003 20.3 3.6 53 112-164 17-69 (77)
234 1wlz_A DJBP, CAP-binding prote 23.8 68 0.0023 22.4 3.3 66 98-165 22-87 (105)
235 3a4u_B Multiple coagulation fa 23.6 99 0.0034 23.6 4.4 62 99-162 67-140 (143)
236 2znd_A Programmed cell death p 23.5 57 0.0019 24.5 3.0 79 100-181 7-86 (172)
237 3ka8_A Ferritin, middle subuni 23.5 1.3E+02 0.0043 24.8 5.3 132 139-273 13-148 (176)
238 3j04_B Myosin regulatory light 22.8 80 0.0027 22.5 3.5 82 101-190 5-94 (143)
239 2bec_A Calcineurin B homologou 22.8 47 0.0016 25.8 2.4 99 81-192 13-134 (202)
240 5pal_A Parvalbumin; calcium-bi 22.7 84 0.0029 21.9 3.6 76 97-181 6-92 (109)
241 1nya_A Calerythrin; EF-hand, m 22.6 1.3E+02 0.0044 22.1 4.7 73 104-178 62-145 (176)
242 2obh_A Centrin-2; DNA repair c 22.2 95 0.0033 22.7 3.9 53 112-164 89-141 (143)
243 2a9g_A Arginine deiminase; arg 21.7 1.1E+02 0.0037 28.6 5.1 70 92-167 45-114 (418)
244 3cs1_A Flagellar calcium-bindi 21.4 93 0.0032 24.9 4.0 12 97-108 65-76 (219)
245 3q5i_A Protein kinase; CDPK, m 21.3 90 0.0031 28.4 4.3 75 100-181 399-481 (504)
246 2kn2_A Calmodulin; S MAPK phos 21.3 1.4E+02 0.0049 20.1 4.4 63 100-164 9-71 (92)
247 3bow_A Calpain-2 catalytic sub 21.1 1.3E+02 0.0045 29.7 5.8 92 81-182 549-653 (714)
248 1ccd_A Clara cell 17 KD protei 20.7 71 0.0024 24.0 3.0 26 123-148 42-67 (77)
249 2b1u_A Calmodulin-like protein 20.7 48 0.0016 21.1 1.8 19 112-130 16-34 (71)
250 3lij_A Calcium/calmodulin depe 20.7 1E+02 0.0035 27.9 4.5 73 99-178 389-469 (494)
251 3e6s_A Ferritin; iron storage, 20.4 1.5E+02 0.0051 24.3 5.1 131 139-272 5-137 (168)
252 1z6o_M Ferritin heavy chain; m 20.3 2.9E+02 0.01 23.0 7.0 121 138-258 20-147 (191)
253 1syy_A Ribonucleoside-diphosph 20.2 80 0.0027 28.8 3.7 151 126-281 63-249 (346)
No 1
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=96.82 E-value=0.0021 Score=49.31 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 021562 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (311)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (311)
.++..++-|..-...|+.+...|.-+...+++.+ |.+++.|.-.+.+|..||.-|-+-+.+.|-..+++ +.+-. ..
T Consensus 7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~-~~~~~--~~ 83 (149)
T 2qqy_A 7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTI-PLRVK--QA 83 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CCCCC--CC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CCCCC--CC
Confidence 4567899999999999999999999999996554 67999999999999999999999888888655542 21111 11
Q ss_pred cCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhhCcchh
Q 021562 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFL 281 (311)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~ll 281 (311)
..+.=++=...=.|+-.-..|=.+...-++..+... -++|+..-++|-+|-..+..++..-|..+
T Consensus 84 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t---~~~l~~~~~eee~h~~~l~~~l~~~~~~~ 148 (149)
T 2qqy_A 84 EDVREMLEYARQSEYETIKRYEKRKEQAANLNMTEL---VVKLEDMIADETNHMEELDRLLNDKAMVL 148 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 233344444444455444444444444444455444 45555567899999999999988755544
No 2
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=96.74 E-value=0.0023 Score=52.02 Aligned_cols=126 Identities=17% Similarity=0.161 Sum_probs=86.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc-ccccccccccc-cCcccccCc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF-NYALDLGFLTK-ARKYTFFKP 216 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df-~l~lDLgfLtk-~k~YTfF~P 216 (311)
..+.|......|-.+.-.|..++++. +||.++++|..+|.+|.+|+..+.+-+..+ | +... +.. ...+..+.|
T Consensus 21 ~~e~L~~A~~~E~~a~~~Y~~~A~~~--~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g-~~~~--~~~~~~~~~~~~~ 95 (175)
T 2fzf_A 21 LEELLGMAIKAEIGAREFYKSLAEKI--KIEALKEKINWLAEEEKKHEALLRKLYSQMFP-GKEV--VFPKEHIGPELQP 95 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHST-TCCC--CCCSCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCC--cchhhhhhhhhhh
Confidence 57888999999999999999999988 669999999999999999999999998865 2 1111 111 111111111
Q ss_pred hh-----------hhhhhhcccccchhhHHHHHHHhhhC-CCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KF-----------IFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kf-----------IfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.+ ++=.-.-.| ..-|..|+.+-+. ++ -.+=+-|+.=..||-+|.+.|..++..
T Consensus 96 ~~~~~~~~~~~~~~L~~ai~~E----~~a~~~Y~~~a~~~~d---~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 96 VARELEKVQDIIDLIRWAMKAE----EIAAEFYLKLEEMVKE---EEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp CCSCCCSHHHHHHHHHHHHHHH----HHHHHHHHHHHHTSCS---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccccCCHHHHHHHHHHHH----HHHHHHHHHHHhhCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 000001111 2356677777665 33 345566888889999999999887754
No 3
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=96.63 E-value=0.0025 Score=51.68 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=84.9
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccccc--ccccccccc-------
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--LDLGFLTKA------- 208 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~--lDLgfLtk~------- 208 (311)
..+.|...+..|-.|.-.|..+++.+++ .||.++++|..||.||.+|+..|-+-.....+. -...++...
T Consensus 6 ~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (167)
T 2oh3_A 6 LAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDE 85 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhhhhH
Confidence 6788999999999999999999995443 599999999999999999999998876553111 011110000
Q ss_pred -CcccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 209 -RKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 209 -k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
..-..+.+..++=.-.-.|+-++--|-.+ .++-++-...- -|+.--++|-.|-+.+..++..
T Consensus 86 ~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~---a~~~~d~~~k~---~~~~la~eE~~H~~~l~~~~~~ 148 (167)
T 2oh3_A 86 NDIHYLMTPYHALRYARDNEIRGMEYYKEA---AANSADPEVKR---LGADFAAEEAEHVVALDKWIEK 148 (167)
T ss_dssp ---CGGGSHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 00011123333333344455555444333 23335544333 4667778899999999888763
No 4
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=96.51 E-value=0.0025 Score=51.56 Aligned_cols=126 Identities=19% Similarity=0.176 Sum_probs=79.6
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccc-cccccccCcccccC--
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD-LGFLTKARKYTFFK-- 215 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD-LgfLtk~k~YTfF~-- 215 (311)
+.+.|...+..|-.|.-.|+.++. . +||.++++|.-||.+|.+|+.+|.+... .+..-+ .++|...-.-.+|+
T Consensus 15 ~~e~L~~Ai~~E~~~~~~Y~~lA~-~--~~~~~k~lF~~LA~eE~~H~~~l~~l~~-~~~~~~~~~~l~~~~~~~~f~~~ 90 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGERFYRELSE-H--FNGEIKKTFLELADQERIHAEIFRKMSD-QENWDEVDSYLAGYAFYEVFPDT 90 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-S--CCSHHHHHHHHHHHHHHHHHHHHHHHHH-HSCHHHHTCBCCSBCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHHHHHHHhhc-cCcchhHHHHHHhhhhhhccchh
Confidence 567888899999999999999999 5 8999999999999999999999998754 221011 12221111112222
Q ss_pred -ch---------hhhhhhhcccccchhhHHHHHHHhhhC-CCCcccchhhhhhhhhccccchhhHHHHHHh
Q 021562 216 -PK---------FIFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (311)
Q Consensus 216 -Pk---------fIfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (311)
+. .++=.-.-.|+ .=|..|+.+... |+-.. =+-|+.--++|..|...+..++.
T Consensus 91 ~~~~~~~~~~~~~~l~~ai~~E~----~a~~~Y~~~a~~~~d~~~---k~l~~~la~eE~~H~~~l~~~~~ 154 (157)
T 1vjx_A 91 SEILRRKDLTLKEVLDIAISVEK----DSIILYYELKDGLVNSDA---QKTVKKIIDQEKEHLRKLLEMKR 154 (157)
T ss_dssp TTGGGCSCCCHHHHHHHHHHHHH----HHHHHHHHHHHHCCSHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccCHHHHHHHHHHHHH----HHHHHHHHHHHhCCCHHH---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11111111122 233456666553 44333 34466677889999998887764
No 5
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=95.99 E-value=0.004 Score=57.89 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc-ccccccc--
Q 021562 134 PLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA-LDLGFLT-- 206 (311)
Q Consensus 134 ~~r~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~-lDLgfLt-- 206 (311)
+.++.|..-|+-+..-| +|||...--+++|- .-|-++++..+.+|||+.|..|.-..++.+.-+ -|-...+
T Consensus 188 ~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p~~~~~~ 265 (375)
T 1mxr_A 188 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 265 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHhh
Confidence 35566666666665556 68887777888885 789999999999999999998876555443322 1111111
Q ss_pred ---ccCcccccCchh---hhhhhhccc---------c--cchhhHHHHH--HHhhhCCCC--cccchhhhhhhhhccccc
Q 021562 207 ---KARKYTFFKPKF---IFYATYLSE---------K--IGYWRYITIY--RHLKANPEF--QCYPIFKYFENWCQDENR 265 (311)
Q Consensus 207 ---k~k~YTfF~Pkf---IfYAtYLSE---------K--IGYwRYItIy--RHLe~~Pe~--rf~PIFk~Fe~WCqDEnR 265 (311)
+.+-+..|+--. +=|+.|+-+ + ..|-||++== .-|-=-|-+ .-.| |.|+++|.+-..-
T Consensus 266 ~~~~~~i~~l~~eave~E~~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~rL~~LG~~~~y~~~~nP-~~w~~~~~~~~~~ 344 (375)
T 1mxr_A 266 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP-IPWINTWLVSDNV 344 (375)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCS-CGGGGGTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-HHHHHHHHhhccc
Confidence 112222221100 113444432 2 3478888843 355444443 3567 5899999865445
Q ss_pred hhhHHH
Q 021562 266 HGDFFS 271 (311)
Q Consensus 266 HGdfFa 271 (311)
+-|||.
T Consensus 345 ~~nFFE 350 (375)
T 1mxr_A 345 QVAPQE 350 (375)
T ss_dssp ------
T ss_pred ccCCCc
Confidence 678985
No 6
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=95.89 E-value=0.017 Score=46.67 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 021562 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (311)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (311)
.++..++.|..-+..|+.+...|..++..+++. .|.+++.|.-+|.+|..||.-|-+-+.+.|-...++.+.+-.. .
T Consensus 8 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~- 85 (179)
T 1nfv_A 8 RKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVT-G- 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCC-S-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCC-C-
Confidence 455688999999999999999999999999764 4999999999999999999999999988887766654432111 1
Q ss_pred cCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
-.+.=++=+..=.|+-.-..|-.+...-+...+. .+-++|+...++|-.|-+.|..++..
T Consensus 86 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~---~t~~~l~~~~~eEe~h~~~l~~~l~~ 145 (179)
T 1nfv_A 86 QAVPVIYESDADQEDATIEAYSQFLKVCKEQGDI---VTARLFERIIEEEQAHLTYYENIGSH 145 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233344444555554444444444444445554 45556666778899999999887763
No 7
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=95.53 E-value=0.023 Score=44.16 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=98.7
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-.|.+|..||--+-+-+.+.|-..++..+.+-.. . ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (158)
T 2y3q_A 5 TKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI-G-ED 82 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578899999999999999999999999644 4889999999999999999999998888887666655433221 1 33
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+.=++=+..=.|+-.-..|=.+...-+...+. .+-++|+...++|-.|-+.+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~---~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDY---VSRDMMIEILRDEEGHIDWLETELDL 140 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555665555555555544444554 45566666778999999999887753
No 8
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=94.81 E-value=0.052 Score=43.46 Aligned_cols=135 Identities=16% Similarity=0.039 Sum_probs=98.6
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++.|...+..|+.+...|.-++..+++. -|.+++.|.-.|.+|..||.-+-+-+.+.|-..+++.+.+-.. ...
T Consensus 7 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~--~~~ 84 (174)
T 3qb9_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI--GQT 84 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC--CCC
Confidence 4578999999999999999999999999764 4899999999999999999999888988887777765544322 234
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+.=++=+..=.|+-.-..|-.+...-+..-+. .+-++|+.-..+|-.|-+.+...++.
T Consensus 85 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~---~t~~~l~~~l~eEe~h~~~l~~~l~~ 142 (174)
T 3qb9_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDT---TSAVLLEKIVADEEEHIDYLETQLEL 142 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555655444444444444444444 45555565677799999999887764
No 9
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=94.56 E-value=0.036 Score=43.15 Aligned_cols=135 Identities=18% Similarity=0.068 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++.|..-...|+.+...|.-++..+++. .|.+++.|.-.+.+|..||.-|-+-+.+.|-..++..+.+-+. . -.
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (161)
T 1jgc_A 5 AKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI-G-EG 82 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578899999999999999999999999764 5789999999999999999999999988887666554432211 1 23
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+.=++=+..=.|+-.-..|-.+...-++. .-+.+-++|+....+|-.|-+.+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (161)
T 1jgc_A 83 PRETLECDLAGEHDALKLYREARDYCAEV---GDIVSKNIFESLITDEEGHVDFLETQISL 140 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555554433333333333332 34556677777788999999999887753
No 10
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=94.46 E-value=0.061 Score=41.37 Aligned_cols=134 Identities=17% Similarity=0.063 Sum_probs=92.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++-|..-...|+.+...|.-++..+++. -+.+++.|.-.|.+|..||.-|-+-+.+.|-..++..+.+-..- ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~--~~ 82 (155)
T 2fkz_A 5 KIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIG--EH 82 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC--CC
Confidence 4578889999999999999999999999764 47788888888999999999999999888876665543332110 12
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+.=++=+.+=.|+- -+..|+.+-+.- +..-+.+-++|+...++|-.|-..+..++..
T Consensus 83 ~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 140 (155)
T 2fkz_A 83 TKEMLECDLKLEQA----GLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDL 140 (155)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333343 334444443222 2234566677777788899999999887753
No 11
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=93.57 E-value=0.074 Score=41.77 Aligned_cols=134 Identities=16% Similarity=0.051 Sum_probs=95.2
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++.|-+-...|+.....|.-.+..+++. .|.+++.|.-.|.+|..||--|=+-+.+.|-...++-+.+-+.- -.
T Consensus 7 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~--~~ 84 (161)
T 3uoi_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG--QT 84 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCC--CC
Confidence 3578899999999999999999999999765 58999999999999999999999988888877666544332111 12
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhC-CCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+.=++=+.+=.|+ ..+..||.+-+- -+..-+.+-++|+....||-.|.++|..+++.
T Consensus 85 ~~e~l~~~l~~E~----~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 142 (161)
T 3uoi_A 85 LREQFEADLAIEY----DVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLEL 142 (161)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223322333333 345555555221 11244567777888899999999999887764
No 12
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=92.90 E-value=0.046 Score=43.99 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=57.6
Q ss_pred HHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc
Q 021562 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (311)
...+.|++++|..= -..+|..+|.-+.=+|..+.... +||.++.++.-++.+|..|+|-+-+.|...
T Consensus 8 e~~~~ls~~~~d~~--rai~aL~~EleAI~~Y~q~A~~t--~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 8 EPTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp SCGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577888888743 35569999999999999999977 899999999999999999999998888765
No 13
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=92.11 E-value=0.098 Score=48.39 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=50.5
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchh---hhhhhhc--
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF---IFYATYL-- 225 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf---IfYAtYL-- 225 (311)
+|||...--+++|. .-|-++++..+.+|||+.|..|.-.-.+..--.. .+.+-+..++--. +=|+.++
T Consensus 191 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~-----~~~~v~~l~~eave~E~~~~~~~l~ 263 (345)
T 1jk0_B 191 AGNYASMFWLTDKK--IMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKP-----NPKIIEKIITEAVEIEKEYYSNSLP 263 (345)
T ss_dssp HHHHHHHHHHTSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-----CHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47888777788875 7899999999999999999987665554322111 1222222221000 0033332
Q ss_pred --------ccccchhhHHHHHH--HhhhCCCCc-ccchhhhhhhhhccccchhhHHHH
Q 021562 226 --------SEKIGYWRYITIYR--HLKANPEFQ-CYPIFKYFENWCQDENRHGDFFSA 272 (311)
Q Consensus 226 --------SEKIGYwRYItIyR--HLe~~Pe~r-f~PIFk~Fe~WCqDEnRHGdfFa~ 272 (311)
.+-..|-||++==| -|---|-+. ..| |.|++.|.-+. +-|||..
T Consensus 264 ~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP-~~wm~~~~~~~--k~nFFe~ 318 (345)
T 1jk0_B 264 VEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNP-FEFMEDVATAG--KTTFFEK 318 (345)
T ss_dssp -----------CTHHHHHHHHHHHHTTCCCCC--------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHhcccc--cCccccC
Confidence 23345778888333 443333322 345 58999996543 3499953
No 14
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=91.77 E-value=0.61 Score=44.74 Aligned_cols=111 Identities=19% Similarity=0.176 Sum_probs=55.1
Q ss_pred cc-chhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchh---hhhhhhc-
Q 021562 151 FS-GFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF---IFYATYL- 225 (311)
Q Consensus 151 FS-GflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf---IfYAtYL- 225 (311)
|| ||...--+++|- .-|-++++..+.+|||++|..|.-..++...= -+++.+-+..++--. +=|+.|+
T Consensus 263 fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~-----~~~~e~v~el~~eave~E~~~~~~~l 335 (419)
T 1jk0_A 263 FSGSFASIFWLKKRG--MMPGLTFSNELICRDEGLHTDFACLLFAHLKN-----KPDPAIVEKIVTEAVEIEQRYFLDAL 335 (419)
T ss_dssp THHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45 555344677765 67999999999999999999887666554211 112222222221000 0044454
Q ss_pred -ccc--------cchhhHHHHH--HHhhhCCCCc-ccchhhhhhhhhccccchhhHHH
Q 021562 226 -SEK--------IGYWRYITIY--RHLKANPEFQ-CYPIFKYFENWCQDENRHGDFFS 271 (311)
Q Consensus 226 -SEK--------IGYwRYItIy--RHLe~~Pe~r-f~PIFk~Fe~WCqDEnRHGdfFa 271 (311)
-+- ..|-+|++== +-|---|-+. ..| |.|++.|.-. .+-|||.
T Consensus 336 p~~liGln~~~~~~YI~Y~Anr~L~~LG~~~~y~~~NP-~~wm~~is~~--~ktnFFE 390 (419)
T 1jk0_A 336 PVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENP-FDFMENISLA--GKTNFFE 390 (419)
T ss_dssp CGGGGTCCHHHHHHHHHHHHHHHHHTTTCCCSSCCCCC-CGGGGC-------------
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC-hHHHHHhccc--cccccCc
Confidence 233 3466777732 2333233221 345 5899998653 3349995
No 15
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=91.76 E-value=0.085 Score=48.33 Aligned_cols=130 Identities=18% Similarity=0.298 Sum_probs=64.9
Q ss_pred HHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccc-cc---c
Q 021562 137 QIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFL-TK---A 208 (311)
Q Consensus 137 ~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfL-tk---~ 208 (311)
+.|..=|+-++.-| +|||...--+++|. +-|-++++..+.+|||++|..|.-..++..-- +.+-+ ++ .
T Consensus 173 ~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~--e~~~~~~~e~~~ 248 (346)
T 2rcc_A 173 KTFLESIVYDVILEGLNFYSGFAFFYNLARNQ--KMVSTSTMINYINRDEQLHVYLFTNIFKELLV--EFPELNTEETKT 248 (346)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCGGGCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCChhccHHHHH
Confidence 34444455555555 58888877888875 68999999999999999999886555443221 11111 11 0
Q ss_pred CcccccCchh---hhhhhhcc--cc--------cchhhHHHH--HHHhhhCCCC---cccchhhhhhhhhccccchhhHH
Q 021562 209 RKYTFFKPKF---IFYATYLS--EK--------IGYWRYITI--YRHLKANPEF---QCYPIFKYFENWCQDENRHGDFF 270 (311)
Q Consensus 209 k~YTfF~Pkf---IfYAtYLS--EK--------IGYwRYItI--yRHLe~~Pe~---rf~PIFk~Fe~WCqDEnRHGdfF 270 (311)
+-+..++--. +=|+.|+- +. ..|-||++= ...|---|-+ ...| |.|+++|.+-..-+-|||
T Consensus 249 ~v~~l~~eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~f~~~~~nP-~~w~~~~~~~~~~~~nFF 327 (346)
T 2rcc_A 249 FVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNP-MKWIRAYEDVNSGKSDFF 327 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSTTCCHHHHHHHHHHHHHHHHHHTTCCCSCTTCCSCS-CTTC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCc-HHHHHHHhccCccccCCC
Confidence 1111111000 01344433 23 347888873 3344333333 4567 689999986545588999
Q ss_pred H
Q 021562 271 S 271 (311)
Q Consensus 271 a 271 (311)
.
T Consensus 328 e 328 (346)
T 2rcc_A 328 E 328 (346)
T ss_dssp -
T ss_pred c
Confidence 5
No 16
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=91.44 E-value=0.44 Score=37.43 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=94.3
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc---ccccCcc
Q 021562 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---LTKARKY 211 (311)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---Ltk~k~Y 211 (311)
++..++-|-+-+..|+.....|.-++..+++.+ +.+++.|.-.|.+|..||--|-+-+.+.|-..+++. +.+.+ -
T Consensus 15 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~~~-~ 93 (170)
T 2vzb_A 15 VKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELAR-C 93 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHHCS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHhhc-C
Confidence 456789999999999999999999999996542 556777777799999999999999998887776655 54432 1
Q ss_pred cc-----cCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 212 TF-----FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 212 Tf-----F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.+ +.+.=++=+..=.|+- -+..|+.+-+.-+..-+.+-++|+...++|-.|-..|..++..
T Consensus 94 ~~~~~~~~~~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 159 (170)
T 2vzb_A 94 KYDSPTAFDSVSLLNQNVSSERC----AILRYQEIANFTNGKDYTTCDIAKHILAEEEEHEQDLQDYLTD 159 (170)
T ss_dssp CCCCCCSCBHHHHHHHHHHHHHH----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1122222222223333 3445555543323225667788888889999999999887753
No 17
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=91.43 E-value=0.15 Score=46.88 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=62.9
Q ss_pred HHHHHHHHHhh-hhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccccccccc----
Q 021562 136 RQIFVEFLERS-CTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLT---- 206 (311)
Q Consensus 136 r~~FidFLerS-cTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLt---- 206 (311)
++.|..=|+-+ +.-| +|||...--+++|- +-|-++++.++.+|||++|..|.-..++..-- +.+-+-
T Consensus 178 ~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~--e~p~~~~~e~ 253 (346)
T 1syy_A 178 LQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQN--KMIGIGEQYQYILRDETIHLNFGIDLINGIKE--ENPEIWTPEL 253 (346)
T ss_dssp HHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCGGGCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCChhhhHHH
Confidence 44555555554 4444 47888777888875 78999999999999999999886554443211 111111
Q ss_pred ccCcccccCchh---hhhhhh-cccc-c--------chhhHHHHHH--HhhhCCCCcccchhhhhhhhhccccchhhHHH
Q 021562 207 KARKYTFFKPKF---IFYATY-LSEK-I--------GYWRYITIYR--HLKANPEFQCYPIFKYFENWCQDENRHGDFFS 271 (311)
Q Consensus 207 k~k~YTfF~Pkf---IfYAtY-LSEK-I--------GYwRYItIyR--HLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa 271 (311)
+.+-+..++--. +=|+.| |.+. + .|-+|++==| .|---|-+.--..|.|+++|-.-+..| |||.
T Consensus 254 ~~~v~~l~~eav~~E~~~~~~~l~~~~~Gln~~~~~~yi~y~an~rL~~lG~~~~y~~~np~pw~~~~~~~~~~~-nFFe 332 (346)
T 1syy_A 254 QQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKEK-NFFE 332 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCTTC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHhCcCCCC-CCCc
Confidence 111121111000 003334 3333 3 4678887443 443333332222367888887665556 9986
No 18
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=91.38 E-value=0.32 Score=38.98 Aligned_cols=134 Identities=19% Similarity=0.152 Sum_probs=104.9
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+.-|+.|-+-...|++....|--.++-.++. -+.+++.|.--|.+|-.||--|=+-+.+.|-...++-+.+.+ .+-.
T Consensus 5 ~kvi~~LN~~l~~El~A~~~Y~~~a~~~~~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~--~~~~ 82 (159)
T 4am5_A 5 QKVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR--IGQT 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC--CCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--cchh
Confidence 3478999999999999999999888877654 689999999999999999999988899999888887765433 2334
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (311)
|.=++=+.+=-|+-.=-.|-.+..+-++.-++...-+|.|| -.||-.|-+.|..++.
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~i---l~eEeeH~~~l~~~L~ 139 (159)
T 4am5_A 83 VKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEEL---MGDEEHHIDFLETQLD 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 55566666667776667777777777777666666555554 4689999999987665
No 19
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=91.38 E-value=0.38 Score=38.53 Aligned_cols=148 Identities=9% Similarity=0.017 Sum_probs=113.3
Q ss_pred cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc----
Q 021562 130 KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---- 204 (311)
Q Consensus 130 ~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---- 204 (311)
.++++.++..++-|-.-...|+.....|+-....++..+ +.+++.|.-.+-+|..||--|-.-+.+.|-..+++.
T Consensus 2 ~~~~~~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~ 81 (158)
T 2c41_A 2 SATTTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYL 81 (158)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheECcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 367888999999999999999999999999999997664 668999999999999999999999999999988875
Q ss_pred ----ccccCcccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhhCcch
Q 021562 205 ----LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (311)
Q Consensus 205 ----Ltk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (311)
+...+. +..++=++=...=.|+..=.+|=.+...-++.-++.-..+ ++..-.++..|-.++.+.++.-|+.
T Consensus 82 ~~s~i~~~~~--~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~l---l~~~l~~~Ek~~w~l~~~l~~~~g~ 156 (158)
T 2c41_A 82 KVATVTPSSG--QLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADL---YTRLVQTHQKHRWFLKEFLAKGDGL 156 (158)
T ss_dssp HHCCSCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCC
Confidence 344433 3456666665555555555555555555555556555555 5556667899999999999887776
Q ss_pred hh
Q 021562 281 LN 282 (311)
Q Consensus 281 l~ 282 (311)
|+
T Consensus 157 ~~ 158 (158)
T 2c41_A 157 VS 158 (158)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 20
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=91.18 E-value=0.039 Score=51.91 Aligned_cols=56 Identities=25% Similarity=0.336 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
.+.++-|.-+..+|..|.=.|.++.... +||.++++|..++.||-+|+|-+=.-+.
T Consensus 18 ~el~~air~ai~~E~eAi~~Y~q~A~~~--~d~~~K~vl~~ia~EEk~H~~~f~~ll~ 73 (345)
T 2e0z_A 18 EELMEILRLAIIAELDAINLYEQMARYS--EDENVRKILLDVAREEKAHVGEFMALLL 73 (345)
T ss_dssp ----------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788889999999999999999988 8999999999999999999994333333
No 21
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=90.76 E-value=0.15 Score=41.12 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=48.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
..+-|.-....|-....+|+++.+++ .+|.++++|..++.||..|...|-+.+.+
T Consensus 101 ~~~~l~~ai~~E~~a~~~Y~~~a~~~--~d~~~k~l~~~la~eE~~H~~~l~~~~~~ 155 (157)
T 1vjx_A 101 LKEVLDIAISVEKDSIILYYELKDGL--VNSDAQKTVKKIIDQEKEHLRKLLEMKRE 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56667778889999999999999998 78999999999999999999988776543
No 22
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.63 E-value=0.23 Score=46.11 Aligned_cols=126 Identities=24% Similarity=0.305 Sum_probs=65.5
Q ss_pred cCChhHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhh----hhhhcccccccc
Q 021562 130 KMQGPLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL----NKGLSDFNYALD 201 (311)
Q Consensus 130 ~l~~~~r~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFl----Nkal~Df~l~lD 201 (311)
+.+.+.++.|..=|+-++.-| +|||...--+++|- +-|-++++.++.+|||+.|..|. +..+....-...
T Consensus 165 ~~~~~~~~~~~~~lva~~~lEGi~FysgF~~~~~l~~~g--~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~ 242 (350)
T 4dr0_A 165 AIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQG--KLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKK 242 (350)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 333334555666666666555 57887777788865 78999999999999999999873 222221111000
Q ss_pred cccccccCcccccCchhhh------------hhhhcccccc-------hhhHHHHHH--HhhhCCCC---cccchhhhhh
Q 021562 202 LGFLTKARKYTFFKPKFIF------------YATYLSEKIG-------YWRYITIYR--HLKANPEF---QCYPIFKYFE 257 (311)
Q Consensus 202 LgfLtk~k~YTfF~PkfIf------------YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~---rf~PIFk~Fe 257 (311)
+ . + -.+|+ |+.|+-+.|| |=||++=-| .|---|-+ ...|+ +.
T Consensus 243 -----~--e---~-~~~i~~l~~eave~E~~~~~~~~~~iGl~~~~~~Yi~y~An~~L~~LG~~~~y~~~~~nP~---~~ 308 (350)
T 4dr0_A 243 -----A--E---L-REFAIDLLNQLYENELEYTEDLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPI---VL 308 (350)
T ss_dssp -----H--H---H-HHHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCCHH---HH
T ss_pred -----H--H---H-HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCch---HH
Confidence 0 0 0 01122 4555555566 667776433 22222322 24576 56
Q ss_pred hhhccccchhhHHH
Q 021562 258 NWCQDENRHGDFFS 271 (311)
Q Consensus 258 ~WCqDEnRHGdfFa 271 (311)
+|..++..+-|||.
T Consensus 309 ~~~~~~~k~~nFFE 322 (350)
T 4dr0_A 309 NGLNTKTKSHDFFS 322 (350)
T ss_dssp HTC-----------
T ss_pred HhcccccCcCCCCc
Confidence 69999888899997
No 23
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=90.37 E-value=0.63 Score=38.68 Aligned_cols=149 Identities=9% Similarity=0.006 Sum_probs=109.8
Q ss_pred hcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc---
Q 021562 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--- 204 (311)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--- 204 (311)
..|+++.++..++.|-.-...|+.....|+-....++..+ +.+++.|.-.+-+|..||.-|-+-+.+.|-..+++.
T Consensus 19 ~~l~~~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~ 98 (192)
T 2vxx_A 19 ILLEKATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQL 98 (192)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 4578889999999999999999999999999999997664 778999999999999999999999999999888751
Q ss_pred --ccccCcc--cccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhhCcch
Q 021562 205 --LTKARKY--TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (311)
Q Consensus 205 --Ltk~k~Y--TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (311)
+++-+.+ .+..++=++=...=.|+..=..|=.+...-+..-| +..-++++...++|-.|-+++.+.+...|-.
T Consensus 99 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D---~~T~~lL~~~l~eeEkh~w~L~~~L~~~~l~ 175 (192)
T 2vxx_A 99 AALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGD---RATAYLYDQILLKTEERAYHIGHFLANDSLK 175 (192)
T ss_dssp HHHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred HHHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1122222 24456666655555554433333333333333334 4455556667788999999999999865543
No 24
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=90.13 E-value=0.18 Score=46.95 Aligned_cols=152 Identities=17% Similarity=0.205 Sum_probs=100.7
Q ss_pred hcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh--ccccchhhhhhhhhhhhcccccccc-cc-c
Q 021562 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS--LMSRDEARHAGFLNKGLSDFNYALD-LG-F 204 (311)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~--lMaRDEARHAGFlNkal~Df~l~lD-Lg-f 204 (311)
|.||++-|+..+++|.+-.-+|..|+.-..|...+- |.|.+-.. -|+-||.+|+-.+...+.++|++-| |- +
T Consensus 23 d~mP~~Yr~~L~~ll~~laD~ELi~~~rl~ew~~~A----P~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~d~l~~~ 98 (311)
T 3pvt_A 23 DWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRA----PTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQK 98 (311)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTHHHHHTTGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 679999999999999999999999999999888877 99887655 4678999999999999999987432 11 1
Q ss_pred ccccCcccc---c-Cc--hhh--hhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh-
Q 021562 205 LTKARKYTF---F-KP--KFI--FYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK- 275 (311)
Q Consensus 205 Ltk~k~YTf---F-~P--kfI--fYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr- 275 (311)
+-.. .+.+ | .| .|- .--.||-+..+.-. |+-|. +..+-|+=+-...=|-+|-.|-++-...++
T Consensus 99 ~r~~-~~~~~~lfe~P~~dWad~vvr~~l~D~~a~~~----~~~L~---~ss~~plA~~a~ki~kEE~yH~~~g~~wv~r 170 (311)
T 3pvt_A 99 MLDG-RMKYSSIFNYPTLSWADIGVIGWLVDGAAIVN----QVALC---RTSYGPYARAMVKICKEESFHQRQGFEACMA 170 (311)
T ss_dssp HHTT-SSCCCGGGGSCCCSHHHHHHHHHHHHHHHHHH----HHTTT---TCSBHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhcc-hhhhhhHHhCCCCCHHHHHHHHHHHHHHHHHH----HHHHH---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 2211 2 23 221 12234444443322 22332 344567777778888889888777544433
Q ss_pred ---hCc---chhhhhHHHHHHHH
Q 021562 276 ---AQP---QFLNDWKAKLWARF 292 (311)
Q Consensus 276 ---aqP---~ll~g~~~kLW~RF 292 (311)
..| +.+..-.+++|...
T Consensus 171 L~~gt~esr~r~Q~Al~~~wp~~ 193 (311)
T 3pvt_A 171 LAQGSEAQKQMLQDAINRFWWPA 193 (311)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHH
Confidence 233 34455567788765
No 25
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=90.02 E-value=0.21 Score=40.68 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=60.5
Q ss_pred hcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccccc
Q 021562 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDL 202 (311)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDL 202 (311)
+||.-+..+..++=|-.-+..+..|..-|+....++ .+|.|+.+|.-|+-+..+|+.=|..-+...|-..+-
T Consensus 2 ~~~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~--~d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~ 73 (153)
T 4etr_A 2 SHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDL--RDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKD 73 (153)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred cchhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 467777778899999999999999999999999999 899999999999999999999999999999976553
No 26
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=89.95 E-value=0.11 Score=47.48 Aligned_cols=44 Identities=20% Similarity=0.041 Sum_probs=36.3
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (311)
+|||...--+++|. +-|-++++..+.+|||++|..|.-..++..
T Consensus 196 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l 239 (311)
T 2o1z_A 196 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLL 239 (311)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48887777788875 789999999999999999998876666543
No 27
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=89.75 E-value=0.68 Score=36.34 Aligned_cols=133 Identities=20% Similarity=0.143 Sum_probs=95.9
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
..++.|-+-...|+.....|.-.+..+++. .+.+++.|.-.+-+|..||--|-+-+.+.|-...++-+.+-+. .-.+
T Consensus 6 ~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~--~~~~ 83 (161)
T 3gvy_A 6 KVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRI--GQTL 83 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCC--CCCH
Confidence 468889999999999999999999988765 5899999999999999999999999999887666644432211 1122
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=++=+.+=.|+ .-|..||.+-+.- +..-+.+-++|+....+|-.|-++|...++.
T Consensus 84 ~e~l~~~l~~E~----~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~ 140 (161)
T 3gvy_A 84 RETLDADLAAEH----DARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDL 140 (161)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222323333333 4566666654322 3455677788888889999999999877654
No 28
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=89.54 E-value=0.14 Score=41.27 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=55.0
Q ss_pred HhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
..+.|++++|..= -..+|..+|..-.-+|.....-. +||.+++++.-.+.+|-+|+|-+=..|..
T Consensus 9 p~e~Ls~e~~d~~--Rai~sl~~EleAI~~Y~q~a~~~--~d~~~k~vl~~i~~EEkeH~g~~lelLrr 73 (95)
T 3k6c_A 9 PTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRR 73 (95)
T ss_dssp CGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHhcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888887643 24569999999999999999987 89999999999999999999987777654
No 29
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=89.17 E-value=0.12 Score=47.42 Aligned_cols=42 Identities=21% Similarity=0.250 Sum_probs=32.2
Q ss_pred ccch-hhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 151 FSGF-LLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 151 FSGf-lLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
+||| ..+.-+++|- +-|-++++.++.+|||++|..|.-..++
T Consensus 181 ysgF~~~~~~l~~rg--~m~G~~~~i~lI~RDE~~H~~f~~~l~~ 223 (323)
T 3ee4_A 181 LTGYYAWHKICVERA--ILPGMQELVRRIGDDERRHMAWGTFTCR 223 (323)
T ss_dssp HHHHHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677 3444577764 6799999999999999999988655444
No 30
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=88.98 E-value=0.16 Score=50.37 Aligned_cols=130 Identities=15% Similarity=0.204 Sum_probs=93.7
Q ss_pred HhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc--cchhhhhh-hhhhhhccccccc---
Q 021562 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS--RDEARHAG-FLNKGLSDFNYAL--- 200 (311)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa--RDEARHAG-FlNkal~Df~l~l--- 200 (311)
.|++||++-|+..+.-++..+-+|..|..-+.++..+- |.|.+.-.+++ -||+||+- .+--+..+||..-
T Consensus 97 ~WqemP~eYR~~LiRlI~~haDSEiagve~e~~wi~~A----PSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e~ 172 (481)
T 3pf7_A 97 VWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTA----PSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREE 172 (481)
T ss_dssp CBSSCCGGGHHHHHHHHHHHHHHHHHHHHHHTTGGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred chhhCCHHHHHHHHHHHHHHhhhHHhhchhhhhHHhcC----CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH
Confidence 68899999999999999999999999999999888776 99988666665 49999996 5666669999873
Q ss_pred -cccc---ccccC----cccccCc--hh--hhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchh
Q 021562 201 -DLGF---LTKAR----KYTFFKP--KF--IFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHG 267 (311)
Q Consensus 201 -DLgf---Ltk~k----~YTfF~P--kf--IfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHG 267 (311)
|... .-+.+ -+-|=-| .| ++-.+||-+.=|.- +|..--+..|-|+=+=+..=|-.|..|-
T Consensus 173 ad~LL~R~sGd~~~pk~L~~FNyPt~~WaD~~~f~~LvDrAgi~-------qL~~L~~sSY~PlARamr~I~kEEafH~ 244 (481)
T 3pf7_A 173 GEALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKF-------QLASLAESAFDPLARTCKFMLTEEAHHL 244 (481)
T ss_dssp HHHHHHCCTTCSSSCCSSGGGSSCCCSHHHHHHHHHHTHHHHHH-------HHHHHTTCSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCcccccccccccCCCCCHHHHHHHHHhhhHHHHH-------HHHHHHhCCcHHHHHHHHHHhhHHHHHH
Confidence 3221 11211 1122222 22 23457777776643 3334446788899999999999997663
No 31
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=88.95 E-value=0.54 Score=44.50 Aligned_cols=43 Identities=26% Similarity=0.168 Sum_probs=36.4
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
+|||...--+++|. .-|-++++..+.+|||++|..|.-..++.
T Consensus 238 ys~F~~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~ 280 (390)
T 1h0o_A 238 SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFKH 280 (390)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888777888875 78999999999999999999887666554
No 32
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=88.85 E-value=0.61 Score=38.31 Aligned_cols=135 Identities=19% Similarity=0.093 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 021562 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (311)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (311)
.+..++.|-+-...|+.....|.-.+..+++. .+.+++.|.-.+-+|..||--|-+-+.+.|-...++-+.+-+ .. -
T Consensus 25 ~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~-~~-~ 102 (182)
T 3fvb_A 25 EPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLR-IG-Q 102 (182)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC-CC-S
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCC-CC-C
Confidence 55688999999999999999999999999765 588999999999999999999999998888776664443221 11 1
Q ss_pred CchhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.+.=++=+.+=.|+- -|..||.+-+-- +..-+.+-++|+....||-.|-++|...++.
T Consensus 103 ~~~e~l~~~l~~E~~----~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~l~~~l~~ 161 (182)
T 3fvb_A 103 NVKEVLEADLKGEYD----ARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDL 161 (182)
T ss_dssp SHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333333333433 444455443211 1234567777888889999999999877654
No 33
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=88.64 E-value=0.28 Score=39.58 Aligned_cols=54 Identities=24% Similarity=0.263 Sum_probs=47.7
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
..+=|.-..-.|-.|.-.|+++..+. .+|.++++|.-+++||.+|...|-+-+.
T Consensus 94 ~~~~l~~A~~~E~~a~~fY~~~a~~~--~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 94 PYHALRYARDNEIRGMEYYKEAAANS--ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777889999999999999988 7899999999999999999999877654
No 34
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=88.50 E-value=0.72 Score=36.63 Aligned_cols=126 Identities=15% Similarity=0.158 Sum_probs=94.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc--cccccccccccccCcccccC
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD--FNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D--f~l~lDLgfLtk~k~YTfF~ 215 (311)
.++.|......|+...-.|--.++..++. -|.+++.|.--|.+|..||.-+=+-+.+ .|. + +-.+.+=.
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~----p----~~~~p~~~ 80 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD----P----ATDKPIGT 80 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC----T----TTSCBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----C----CcCCCCcc
Confidence 88999999999999999999999988655 5999999999999999999988777776 543 1 11122223
Q ss_pred chhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh
Q 021562 216 PKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (311)
Q Consensus 216 PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (311)
++=++=..+=.|+--+ -+|-.+...-+.. ..+.+.++|+.=..||-.|.+.|..++.
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~e---gd~~~~~~f~~i~~~E~~H~~~~~~~l~ 138 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREE---GFPEVAEWFETLARAEKSHAEKFQNVLK 138 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555566664 5565555555543 4566778888889999999999988875
No 35
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=88.28 E-value=0.3 Score=41.39 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=76.0
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchh
Q 021562 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (311)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf 218 (311)
++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.+.| -....|...
T Consensus 8 ~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~i~--~t~enL~~a---------- 75 (170)
T 3pwf_A 8 KKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLG--KTPENLQMG---------- 75 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH----------
Confidence 5667777788888776666556555544 899999999999999999985555565422 111222111
Q ss_pred hhhhhhcccccchhhHHHHHHH-hhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 219 IFYATYLSEKIGYWRYITIYRH-LKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 219 IfYAtYLSEKIGYwRYItIyRH-Le~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.-.|.. -+..+|.. .+.--+-.+.-+-++|+.=..||-+|+|.|..++..
T Consensus 76 -----~~gE~~---e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~ 126 (170)
T 3pwf_A 76 -----IEGETF---EVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEK 126 (170)
T ss_dssp -----HHHHHH---HHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHhHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 12233311 223334567778889999999999999999988764
No 36
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=87.83 E-value=0.18 Score=46.64 Aligned_cols=111 Identities=18% Similarity=0.155 Sum_probs=55.0
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC------chhhhhhh-
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK------PKFIFYAT- 223 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~------PkfIfYAt- 223 (311)
+|||...--+++|. .-|-++++..+.+|||++|..|.-..++..--.. ++.+-+..++ -+|+-++.
T Consensus 197 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~-----~~~~v~~l~~eave~E~~~~~~~l~ 269 (349)
T 2p1i_A 197 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKL-----PENVVQNIVKEAVEVERSFICESLP 269 (349)
T ss_dssp HHHHHHHHHHHTTT--CSTTHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-----CHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47887777788875 7899999999999999999988766655433211 1222222221 11221110
Q ss_pred ----hc--ccccchhhHHHHHH--HhhhCCCC-cccchhhhhhhhhccccchhhHHH
Q 021562 224 ----YL--SEKIGYWRYITIYR--HLKANPEF-QCYPIFKYFENWCQDENRHGDFFS 271 (311)
Q Consensus 224 ----YL--SEKIGYwRYItIyR--HLe~~Pe~-rf~PIFk~Fe~WCqDEnRHGdfFa 271 (311)
=| .+-..|-||++==| -|---|-+ .-.| |.|++.|.-.. +-|||.
T Consensus 270 ~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP-~~wm~~~~~~~--k~nFFe 323 (349)
T 2p1i_A 270 CDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNP-FNWMDLISLQG--KTNFFE 323 (349)
T ss_dssp STTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCS-CCC----------------
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC-hHHHHHhcccc--cCCccc
Confidence 01 23345778877333 33322222 1346 47899986432 348985
No 37
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=87.18 E-value=0.22 Score=45.00 Aligned_cols=37 Identities=35% Similarity=0.519 Sum_probs=31.9
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhh
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL 189 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFl 189 (311)
+|||...--+++|- +-|-++++.++.+|||+.|..|.
T Consensus 172 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~ 208 (296)
T 3mjo_A 172 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYI 208 (296)
T ss_dssp HHHTHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CcchHHHHHHHHHHHHHHHHHHH
Confidence 38888777888874 78999999999999999998774
No 38
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=87.06 E-value=0.12 Score=42.54 Aligned_cols=123 Identities=16% Similarity=0.118 Sum_probs=78.3
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCch
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPK 217 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pk 217 (311)
-++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.+.|-. +-| +..=..+
T Consensus 13 t~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~~p-~~~-------~~~~~T~ 84 (144)
T 4di0_A 13 TEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDP-ATG-------LPFGTSR 84 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTS-------CCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-ccC-------CCCCcHH
Confidence 56778888889988877777666655443 89999999999999999999766777765411 111 0000000
Q ss_pred hhhhhhhcccc----cchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh
Q 021562 218 FIFYATYLSEK----IGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (311)
Q Consensus 218 fIfYAtYLSEK----IGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (311)
=-+-+-.=.|. -.|-.|+.+=|- --+.-|=++|+.=+.||-+|++-|..+|.
T Consensus 85 enL~~A~~GE~~e~~~~Y~~~a~~A~~------eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~ 140 (144)
T 4di0_A 85 QNLQSAIAGETHEYTDMYPGMAKTARD------EGFEEIANWFETLAKAERSHANRYTKALD 140 (144)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHH------HTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHH------CCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01111111111 123333333322 23556888999999999999999988875
No 39
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=86.86 E-value=0.24 Score=45.51 Aligned_cols=45 Identities=24% Similarity=0.501 Sum_probs=36.0
Q ss_pred hccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 148 TAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
.-|-.=.+.|..+++.. ..|.|+++.+..|+||+||.+|--+-++
T Consensus 157 fqE~aT~v~y~n~a~~~--~dPvL~~i~~~IA~DE~RH~~~y~~~v~ 201 (275)
T 1za0_A 157 FYERCGAVFCRNLAAQI--EEPILAGLIDRIARDEVRHEEFFANLVT 201 (275)
T ss_dssp HHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555578899999765 7999999999999999999998554443
No 40
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=86.35 E-value=0.25 Score=45.26 Aligned_cols=109 Identities=25% Similarity=0.393 Sum_probs=56.3
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchhhh----------
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIF---------- 220 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~PkfIf---------- 220 (311)
+|||...--+++|- +-|-++++.++.+|||+.|..|.-.-.... +.-++....=. + -.+|+
T Consensus 173 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~-----~~~~~~~~~~e-~-~~~~~~l~~eave~E 243 (329)
T 3dhz_A 173 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYIGYKYQQG-----VKKLSEAEQEE-Y-KAYTFDLMYDLYENE 243 (329)
T ss_dssp HHHHHHHHHHHTTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTSCHHHHHH-H-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhhHHhHHH-H-HHHHHHHHHHHHHHH
Confidence 38888877888865 779999999999999999987743222111 00011100000 0 01233
Q ss_pred --hhhhcccccc-------hhhHHHHHH--HhhhCCCCc-----ccchhhhhhhhhccc-cchhhHHH
Q 021562 221 --YATYLSEKIG-------YWRYITIYR--HLKANPEFQ-----CYPIFKYFENWCQDE-NRHGDFFS 271 (311)
Q Consensus 221 --YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~r-----f~PIFk~Fe~WCqDE-nRHGdfFa 271 (311)
|+.|+-+.|| |=||++==| .|---|-+. ..|+. ..|-+.+ ..|-|||.
T Consensus 244 ~~~~~~~~~~iGl~~~~~~yi~y~An~~L~~lG~~~~y~~~~~~~nP~~---~~~~~~~~~~~~nFFe 308 (329)
T 3dhz_A 244 IEYTEDIYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAI---LSSLSPNADENHDFFS 308 (329)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHH---HHHHC-----------
T ss_pred HHHHHHHHhccCchHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCccc---HHHhccCccccCCCCC
Confidence 5666667788 888887544 222222222 34543 3466665 57889996
No 41
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=86.25 E-value=0.27 Score=44.86 Aligned_cols=109 Identities=23% Similarity=0.336 Sum_probs=57.5
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchhhh----------
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIF---------- 220 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~PkfIf---------- 220 (311)
+|||...--+++|. +-|-++++.++.+|||+.|..|.-.-.... +.-++....=. + -.+|+
T Consensus 163 ys~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~-----~~~~~~~~~~e-~-~~~i~~l~~eave~E 233 (319)
T 3n37_A 163 YSGFWLPMYFSSRG--KLTNTADLIRLIIRDEAVHGYYIGYKYQKN-----MEKISLGQREE-L-KSFAFDLLLELYDNE 233 (319)
T ss_dssp HHHHHHHHHHHHTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTSCHHHHHH-H-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHhHHHHHHHHHHHHHHH-----HHhhhHHhHHH-H-HHHHHHHHHHHHHHH
Confidence 38888888888874 789999999999999999987633221111 00011100000 0 01244
Q ss_pred --hhhhcccccc-------hhhHHHHHH--HhhhCCCCc-----ccchhhhhhhhhccc-cchhhHHH
Q 021562 221 --YATYLSEKIG-------YWRYITIYR--HLKANPEFQ-----CYPIFKYFENWCQDE-NRHGDFFS 271 (311)
Q Consensus 221 --YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~r-----f~PIFk~Fe~WCqDE-nRHGdfFa 271 (311)
|+.|+-+.|| |=||++==| .|---|-+. ..|+. .+|-+.+ ..|-|||.
T Consensus 234 ~~~~~~~~~~iGl~~~~~~yi~y~An~~L~~lG~~~~f~~~~~~~nP~~---~~~~~~~~~~~~nFFe 298 (319)
T 3n37_A 234 LQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI---LAALSPNADENHDFFS 298 (319)
T ss_dssp HHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHTTCCCCSCGGGCCCCHHH---HHHHCC----------
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCccc---HHhhccCccccCCCCC
Confidence 5666667888 888887544 222223222 34543 3477776 67889996
No 42
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=85.29 E-value=1.1 Score=38.69 Aligned_cols=131 Identities=13% Similarity=0.114 Sum_probs=84.7
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCchh
Q 021562 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (311)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf 218 (311)
++-|......|....-.|...++..++. .+.++.+|...|.+|..||.-+-+.|.+.|-.+.+ -+.....+. ...=
T Consensus 30 ~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~p~~~~g--st~e 106 (202)
T 1yuz_A 30 LENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTVAAPSAY--SCDL 106 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC--CCCC--CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCccCCC--CHHH
Confidence 4667777788888888888888877665 79999999999999999999999999876544332 111000000 0111
Q ss_pred hhhhhhcccccchhhHHHHHHHhhh-CCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 219 IFYATYLSEKIGYWRYITIYRHLKA-NPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 219 IfYAtYLSEKIGYwRYItIyRHLe~-~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.+=+.+=.|. --+...|..+-+ --+-.++.+.++|+.-..+|-+|.+-|..++..
T Consensus 107 nL~~a~~gE~---~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~ 162 (202)
T 1yuz_A 107 NLISGANGEI---YETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYND 162 (202)
T ss_dssp HHHHHHHHHH---HHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111110 122233332221 123457789999999999999999999998864
No 43
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=84.06 E-value=1.7 Score=39.80 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=43.5
Q ss_pred HHhhcCChhHHHHHHHHHH-----hhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccccc
Q 021562 126 EAADKMQGPLRQIFVEFLE-----RSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY 198 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLe-----rScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l 198 (311)
++|..|+++.|..+.--|- .|..++.-+ .+...+.. .+|++.-.+...+=+|++|+-.-..-+.-+|.
T Consensus 53 ~dw~~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~-----~~~~~v~~e~~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~ 126 (323)
T 3ee4_A 53 ADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQ-----PFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGI 126 (323)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTH-----HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3677888888877643221 112222211 23333321 36999999999999999999988777776654
No 44
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=83.46 E-value=0.41 Score=43.97 Aligned_cols=39 Identities=26% Similarity=0.170 Sum_probs=32.2
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 021562 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
+|||...--+++|- +-|-++++.++.+|||+.|..|.-.
T Consensus 181 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~ 219 (324)
T 4a58_A 181 ISSFYSIALLRVRG--LMPGICLANNYISRDELLHTRAASL 219 (324)
T ss_dssp HHHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHH
Confidence 47887666788865 7899999999999999999987443
No 45
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=83.26 E-value=2.6 Score=34.26 Aligned_cols=135 Identities=16% Similarity=0.224 Sum_probs=105.7
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
..++-|-+-...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+- .-.|=.+
T Consensus 5 ~~~~~Ln~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p-~~~~~~~ 83 (167)
T 1krq_A 5 EVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQP-EQNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCC-CCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCcCCH
Confidence 467888888999999999999888777655 59999999999999999999998889999998988877654 2233346
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=++=+..=-||.---.|-.++..-+.+-+ +.+.++|+.--.++-.|.+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~D---~~~~~~l~~~l~Eq~e~~~~l~~~l~~ 140 (167)
T 1krq_A 84 LDVFEKTYEHEQFITKSINTLVEHMLTHKD---YSTFNFLQWYVSEQHEEEALFRGIVDK 140 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777889888888889888887654 445555664456667798888777643
No 46
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=83.22 E-value=0.68 Score=37.38 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=48.2
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
..+-|.-..-.|-...-.|+++.... .+|.++++|.-+++||.+|.-.|-+.+..
T Consensus 106 ~~~~L~~ai~~E~~a~~~Y~~~a~~~--~d~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 106 IIDLIRWAMKAEEIAAEFYLKLEEMV--KEEEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888889999999999999987 57999999999999999999988776654
No 47
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=82.80 E-value=2.9 Score=32.47 Aligned_cols=132 Identities=12% Similarity=0.010 Sum_probs=93.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc-
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF- 214 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF- 214 (311)
+..++.|-+-...|+.-...|.-.+..+++. -+.+++.|.-.|.+|..||--|=+-+.+.|-...+ -+.+ ....
T Consensus 5 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~---~~~~~ 80 (154)
T 3r2k_A 5 PEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDD---IHPGT 80 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCC---CCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCC---CCCCC
Confidence 3478889999999999999999999999765 68899999999999999999999988888866555 2221 1111
Q ss_pred CchhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhhhhhcc-ccchhhHHHHHHhh
Q 021562 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQD-ENRHGDFFSALMKA 276 (311)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~rf~PIFk~Fe~WCqD-EnRHGdfFa~lmra 276 (311)
.+.=++=+.+=.|+- -|..||.+-+-- +..-+.+-++|+....| |-.|-++|...+..
T Consensus 81 ~~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~ 140 (154)
T 3r2k_A 81 TVPEMLEADLKLERH----VRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGL 140 (154)
T ss_dssp SHHHHHHHHHHHHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233333333433 445555543322 12455667778888899 99999999877653
No 48
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=82.35 E-value=0.47 Score=45.05 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=34.7
Q ss_pred cccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 150 EFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 150 EFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
|-.-++.|..++|.-+.. .|.|+++.+..|+||+||.+|--+-++
T Consensus 171 E~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~ 216 (338)
T 2uw1_A 171 ERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVE 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444456777777664444 999999999999999999998665554
No 49
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=78.86 E-value=0.77 Score=41.23 Aligned_cols=49 Identities=24% Similarity=0.121 Sum_probs=35.8
Q ss_pred HHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 142 FLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 142 FLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
+||. +-- ++||...--+++|. +=|-++++..+.+|||+.|..|.-.-.+
T Consensus 166 ~lEg-i~f-~~~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~~~~~l~~ 214 (286)
T 3olj_A 166 AVEG-IFF-SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFK 214 (286)
T ss_dssp HHHH-TTT-HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHH-HHHHHHHHHHHHCC--CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4553 433 66777555677664 6799999999999999999988655443
No 50
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=78.06 E-value=5 Score=32.41 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=106.6
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
..++-|-+=...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+-.. .|=.|
T Consensus 5 ~~~~~LN~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~-~~~~~ 83 (165)
T 1eum_A 5 EMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA-EYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-CCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC-CCCCH
Confidence 456777777888999888888888776655 5999999999999999999988888889999999988766553 44457
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=++=+..=-||.---.|-.+++.-+++- .+...++|+.--.||-.|-+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~---D~~~~~fl~~~l~eq~e~~~~l~~~l~~ 140 (165)
T 1eum_A 84 DELFQETYKHEQLITQKINELAHAAMTNQ---DYPTFNFLQWYVSEQHEEEKLFKSIIDK 140 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888889988888888988888764 4556666773456778888888776643
No 51
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=77.83 E-value=5.2 Score=32.04 Aligned_cols=135 Identities=15% Similarity=0.136 Sum_probs=99.7
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
..++-|-+-...|+....+|--++...++. -|.+++.|.-.|-+|..||.-|=+-+.+.|-.++++-+.+.+ -.+-.+
T Consensus 5 ~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~-~~~~~~ 83 (174)
T 2jd6_0 5 RMLKALNDQLNRELYSAYLYFAMAAYFEDLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPP-KEWESP 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-cCcCCH
Confidence 457778888899998888888777766533 488999999999999999999999999999998887766542 234455
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=++=+..=.||-.-..|-.+...-+..-+ +..-++++...+++-.|...+..++..
T Consensus 84 ~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D---~~t~~~l~~~l~eq~e~~~~l~~~l~~ 140 (174)
T 2jd6_0 84 LKAFEAAYEHEKFISKSIYELAALAEEEKD---YSTRAFLEWFINEQVEEEASVKKILDK 140 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556655566666655555555555555544 556677776778888999988877643
No 52
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=77.09 E-value=5.7 Score=30.92 Aligned_cols=75 Identities=11% Similarity=0.174 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCC-------hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHH
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-------~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~la 172 (311)
+++..+...+ |.|..-.+--+||...+..+- +...+..++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.
T Consensus 88 ~~~~~~F~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~ 164 (198)
T 2r2i_A 88 QKLRWYFKLY--DVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ-KDEVLL 164 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT-TCHHHH
T ss_pred HHHHHHHHHh--cCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-cCHHHH
Confidence 3344444433 566666677777876665441 222233344444455556688888888888775 678888
Q ss_pred HHhhc
Q 021562 173 EIFSL 177 (311)
Q Consensus 173 e~F~l 177 (311)
+++..
T Consensus 165 ~~~~~ 169 (198)
T 2r2i_A 165 DILTR 169 (198)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 87764
No 53
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=75.39 E-value=1 Score=41.48 Aligned_cols=165 Identities=16% Similarity=0.132 Sum_probs=87.6
Q ss_pred cHHHHHHHHHHHhhccCCcccccCh---hHHH--------HhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNK---EFKE--------AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~---eF~~--------~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
+++.++..|+ ..+.-|.+-|+-.+ .|+. ....||++.+... +--+.-| ++-..|.-.-.++-.
T Consensus 18 ~~~~~~~~l~-~~~~W~p~d~lPw~~~~~F~~~~~~~~~~~~~~L~d~~~~~l----~~~~itE-d~LP~Y~~~L~~~~~ 91 (275)
T 1za0_A 18 VEANMTRHLD-TEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDAC----EILLILK-DNLAGHHRELVEHFI 91 (275)
T ss_dssp HHHHHHHHHH-TCCCCCGGGGCCGGGCCCCGGGTSCCCCGGGCCSCHHHHHHH----HHHHHHH-HC-------------
T ss_pred HHHHHHHHhh-hhccCChhhcCCCcccccchhcccccccHhhccCCHHHHHHH----HHHHHHh-hcchHHHHHHHHhcC
Confidence 4456666677 77788888888766 5643 3356777655543 4444555 566666643344443
Q ss_pred cChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc---cCchh-----hhhhhhcccccchhhHHHHH
Q 021562 167 TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF---FKPKF-----IFYATYLSEKIGYWRYITIY 238 (311)
Q Consensus 167 ~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf---F~Pkf-----IfYAtYLSEKIGYwRYItIy 238 (311)
.++..+.--.-=...|.||+=-||+-|---|. +|...|-+.+.|.. |.|.. -+=.|-.-|+-- -.-|
T Consensus 92 ~d~~w~~w~~~WtaEE~rHg~aL~~YL~~sg~-vdp~~lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT----~v~y 166 (275)
T 1za0_A 92 LEDWWGRWLGRWTAEEHLHAIALREYLVVTRE-VDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCG----AVFC 166 (275)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-SCTTTTTCTTC----------CCCHHHHHHHHHHHHHHH----HHHH
T ss_pred CCchHHHHhhhHhHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH----HHHH
Confidence 45667776666678999999999999975565 78888888877532 23321 010011122111 0114
Q ss_pred HHhhhCCCCcccchh-hhhhhhhccccchhhHHHHHHhh
Q 021562 239 RHLKANPEFQCYPIF-KYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 239 RHLe~~Pe~rf~PIF-k~Fe~WCqDEnRHGdfFa~lmra 276 (311)
|.+.+.-+ .|+. +-...=-.||+||..||.-+++.
T Consensus 167 ~n~a~~~~---dPvL~~i~~~IA~DE~RH~~~y~~~v~~ 202 (275)
T 1za0_A 167 RNLAAQIE---EPILAGLIDRIARDEVRHEEFFANLVTH 202 (275)
T ss_dssp HHHHHHCC---SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55553211 3553 12233336999999999877664
No 54
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=74.62 E-value=11 Score=28.96 Aligned_cols=71 Identities=18% Similarity=0.146 Sum_probs=50.3
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
...+..+++++++..+ |.|..-.+--+||...+.....+.+..-+.-+-+.+-..=+|.|-..|+.+-++.
T Consensus 67 ~~~~~~~~~~~~~~~~--D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 137 (204)
T 3e3r_A 67 GLVLDQAEAEGVCRKW--DRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSG 137 (204)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCC
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHcc
Confidence 4556677888888877 5555556666788777776655555555555666667778899999999887753
No 55
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=74.50 E-value=1.5 Score=35.95 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=43.0
Q ss_pred HHHHHhhhhccccch-hhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 140 VEFLERSCTAEFSGF-LLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 140 idFLerScTaEFSGf-lLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
.+-|+.+.-.|..-+ -.|.+..+.-++. .+.++.+|..+++||.+|+.-.-+.|..
T Consensus 84 ~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~ 141 (144)
T 4di0_A 84 RQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDG 141 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666667776665 3676666655444 8999999999999999999998888764
No 56
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=73.73 E-value=3.9 Score=31.19 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=37.0
Q ss_pred ccCCcccccChhHHHHhhcC------------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
|.|..-.+--+||...+..+ .++....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|.+
T Consensus 109 D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK-ADPSIVQALSL 185 (190)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH-HCHHHHHHHCC
T ss_pred cCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH-hChHHHHHHhh
Confidence 55555666666776554441 1112222233333444555678888888877664 56777777654
No 57
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=73.57 E-value=7 Score=31.15 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=39.7
Q ss_pred ccCCcccccChhHHHHhhcC------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh
Q 021562 112 DYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~ 176 (311)
|.|..-++--+||...+..+ .+...+.-++-+-+.+-..=+|.|-|.|+.+-+. ++|.+.++|.
T Consensus 103 D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~ 172 (211)
T 2ggz_A 103 DADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA-KDQDLLEIVY 172 (211)
T ss_dssp CTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-TTTTTHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-hCHHHHHHHh
Confidence 66666677777777665443 2222223333333444455678888888888775 6788888877
No 58
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=73.23 E-value=1.5 Score=41.70 Aligned_cols=55 Identities=16% Similarity=0.301 Sum_probs=38.8
Q ss_pred chhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh----hCcchhhhh
Q 021562 230 GYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK----AQPQFLNDW 284 (311)
Q Consensus 230 GYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr----aqP~ll~g~ 284 (311)
+|-|+|+-+-.+..+-...-.|..+|-..|--.||||||....-|. .+|..+...
T Consensus 85 tY~~~L~~~fgvrd~~g~~~~~w~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~ 143 (338)
T 2uw1_A 85 TYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKT 143 (338)
T ss_dssp HHHHHHTTSTTTSCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHH
T ss_pred HHHHHHHHHcCcccccCCCcchHHHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 4556665554554443333578899999999999999999886554 677776543
No 59
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=72.59 E-value=0.58 Score=38.75 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=56.5
Q ss_pred HHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 021562 125 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (311)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (311)
+..+....+...+++.+-|-....||.+-..+|..|.... -|+....++.-..+||-||.|..-....
T Consensus 19 ~~~~~~~~~~~~~el~~lIr~~ikaE~~AI~~Y~qLA~~A--P~ee~k~iI~eIr~DE~rH~~~F~~lY~ 86 (115)
T 2hz8_A 19 KEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKA--RNPEKRQVIDKILEDEEKHIEWLKAASK 86 (115)
T ss_dssp HHHHHHHHHTCHHHHTTTHHHHHHHHHHHHHHHHHHHHSC--CCTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445554555677788888888899999999999999977 6888999999999999999998877766
No 60
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=72.59 E-value=5.4 Score=32.93 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=110.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++-|-+=...|+...-.|--+++-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 6 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p-~~~~~~ 84 (173)
T 1s3q_A 6 EKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP-PSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 3467788888899999999999888777655 59999999999999999999999999999999999988765 344556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
|.=++=+.+=-||.---.|-.++..-+++-++.-.-++.| --.||-.|-+-+.-++..
T Consensus 85 ~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~---~l~eq~e~~~~l~~~l~~ 142 (173)
T 1s3q_A 85 PLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQW---YVAEQVEEEASALDIVEK 142 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 7778888888899999999999999988766655555444 457788898888776643
No 61
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=72.29 E-value=6.3 Score=32.43 Aligned_cols=135 Identities=14% Similarity=0.173 Sum_probs=99.2
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
..++-|-+-...|+....+|--++...+.. -|.+++.|.-.|-+|..||.-|=+-+.+.|-.++++-+.+.+. .+-.+
T Consensus 10 ~v~~~LN~~la~El~a~~~Yl~~a~~~~~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~-~~~~~ 88 (189)
T 3oj5_A 10 KFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRN-QFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-CCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCC-CCCCH
Confidence 467888888899998888888777766544 4889999999999999999999999999999988877666432 23345
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=++=+..=.|+..-..|-.+...-+..- -+..-++|+..-++|-.|-..+..++..
T Consensus 89 ~e~l~~~l~~E~~~~~~~~~l~~~A~~~~---D~~t~~~l~~~l~eqe~~~~~l~~~l~~ 145 (189)
T 3oj5_A 89 REALALALDQERTVTDQVGRLTAVARDEG---DFLGEQFMQWFLQEQIEEVALMATLVRV 145 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555556655555555555555543 4566677776778899999999887753
No 62
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=72.26 E-value=13 Score=25.91 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=52.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhh----cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCh
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP 169 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP 169 (311)
...+..++++.+++.+ |.|..-.+--+||...+. ...+...+. +.-+-+.+-..=+|.|-+.|+.+-++..++
T Consensus 30 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~-~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~ 106 (134)
T 1jfj_A 30 RAIKNEQLLQLIFKSI--DADGNGEIDQNEFAKFYGSIQGQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106 (134)
T ss_dssp CCSSHHHHHHHHHHHH--CSSCCSEEEHHHHHHHTTCSSCCSSHHHHHH-HHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCeEcHHHHHHHHHHhcccccCCCHHH-HHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence 3455567788887766 555555666678877763 222222222 444555666777899999999887764432
Q ss_pred -hHHHHhhccccc
Q 021562 170 -VVAEIFSLMSRD 181 (311)
Q Consensus 170 -~lae~F~lMaRD 181 (311)
.+.++|..+..|
T Consensus 107 ~~~~~~~~~~D~~ 119 (134)
T 1jfj_A 107 EKVAEQVMKADAN 119 (134)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCC
Confidence 266666665544
No 63
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=72.11 E-value=8.7 Score=29.23 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=38.3
Q ss_pred ccCCcccccChhHHHHhhcC----C--------hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAADKM----Q--------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~--------~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
|.|..-.+--+||...+..+ . +.....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|..
T Consensus 109 D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1fpw_A 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK-VDPSIIGALNL 185 (190)
T ss_dssp CSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH-SSTTHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHHhh
Confidence 55555566666776554431 0 112222233333444555678888888888775 67888887764
No 64
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=71.88 E-value=6.5 Score=28.98 Aligned_cols=93 Identities=16% Similarity=0.316 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhH
Q 021562 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVV 171 (311)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~l 171 (311)
.++++.+.+-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+ +|.|-|.|...-+.. ....+
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l 87 (153)
T 2ovk_B 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDAL 87 (153)
T ss_dssp HHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHHH
Confidence 3455555555543 778878888888888776653222222233333333 999999987765543 23568
Q ss_pred HHHhhccccchhhhhhhhhh-----hhccccc
Q 021562 172 AEIFSLMSRDEARHAGFLNK-----GLSDFNY 198 (311)
Q Consensus 172 ae~F~lMaRDEARHAGFlNk-----al~Df~l 198 (311)
.++|..+-+| +-|+|+. +|..+|.
T Consensus 88 ~~~F~~~D~d---~~G~I~~~el~~~l~~~g~ 116 (153)
T 2ovk_B 88 RNAFSMFDED---GQGFIPEDYLKDLLENMGD 116 (153)
T ss_dssp HHHHHTTCSS---CSSCCCHHHHHHHHHHSSS
T ss_pred HHHHHHHCCC---CCCeEcHHHHHHHHHHcCC
Confidence 8999988665 4677664 4555554
No 65
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=70.28 E-value=12 Score=30.41 Aligned_cols=64 Identities=9% Similarity=0.258 Sum_probs=37.3
Q ss_pred ccCCcccccChhHHHHhh---------cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh
Q 021562 112 DYNQTHFVRNKEFKEAAD---------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d---------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~ 176 (311)
|.|..=++--+||...+. .++++.-+..++-+.+.+-..=.|.|-|.|..+-++ ++|.+.+.|.
T Consensus 139 D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~-~~p~~~~~l~ 211 (214)
T 2l4h_A 139 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSFK 211 (214)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH-TCHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-hChHHHHhcc
Confidence 555555666666655442 344444444444444555555567777777777664 5677766654
No 66
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=69.91 E-value=10 Score=29.62 Aligned_cols=65 Identities=11% Similarity=0.135 Sum_probs=38.0
Q ss_pred ccCCcccccChhHHHHhhcCC--------h---------hHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHH
Q 021562 112 DYNQTHFVRNKEFKEAADKMQ--------G---------PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEI 174 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~--------~---------~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~ 174 (311)
|.|..-.+--+||...+..+. + .....-++-+-+.+-..=+|.|-|.|..+-++ ++|.+.++
T Consensus 105 D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~-~~~~~~~~ 183 (204)
T 1jba_A 105 DKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR-RDKWVMKM 183 (204)
T ss_dssp CSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT-TTTTHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-cChHHHHH
Confidence 556666666667765554330 0 02223333344444555678888888887775 67887777
Q ss_pred hhc
Q 021562 175 FSL 177 (311)
Q Consensus 175 F~l 177 (311)
+..
T Consensus 184 ~~~ 186 (204)
T 1jba_A 184 LQM 186 (204)
T ss_dssp HHS
T ss_pred HHh
Confidence 753
No 67
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=69.73 E-value=6.6 Score=35.74 Aligned_cols=143 Identities=12% Similarity=0.105 Sum_probs=76.3
Q ss_pred HHhhcCChhHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccc-------
Q 021562 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN------- 197 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~------- 197 (311)
++|.+|+++.|..+.-=|--=..++ ..|-.+-..+.+-+ .+|+..-.+...+=+|++|+-.-+.-+.-++
T Consensus 74 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~ 151 (311)
T 2o1z_A 74 KDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQV--KITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERM 151 (311)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHC-------CHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4677888888776654332211111 22232334455656 6799999999999999999876665555443
Q ss_pred ----cccccccccccCc-----c----cccCchhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhhhhhccc
Q 021562 198 ----YALDLGFLTKARK-----Y----TFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (311)
Q Consensus 198 ----l~lDLgfLtk~k~-----Y----TfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDE 263 (311)
-..+...|.++-+ | ++. -+.|-| ++-|.|=+ -=|-.|| .|.++. ..-=+-+=.+-=+.||
T Consensus 152 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~-~~lva~--~~lEGi~fysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 225 (311)
T 2o1z_A 152 NLFHAIENIPAVKNKALWAAKWINDTNSFA-ERIVAN--ACVEGILFSGSFCAIF-WFKKQN--KLHGLTFSNELISRDE 225 (311)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHSSTTSCHH-HHHHHH--HHHHHTTTHHHHHHHH-HHHHTT--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHcCccHHH-HHHHHH--HHHHHHHHHHHHHHHH-HHHHcC--CcccHHHHHHHHHHHH
Confidence 2233344432200 1 111 122323 24555532 3344444 455442 1212222234446799
Q ss_pred cchhhHHHHHHhh
Q 021562 264 NRHGDFFSALMKA 276 (311)
Q Consensus 264 nRHGdfFa~lmra 276 (311)
.+||+|...+++.
T Consensus 226 ~~H~~f~~~l~~~ 238 (311)
T 2o1z_A 226 GLHTDFNCLIYSL 238 (311)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 68
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=68.62 E-value=12 Score=28.58 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=17.9
Q ss_pred hhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 147 CTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 147 cTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
+-..=+|.|-|.|+.+-++ .+|.+.+.|..
T Consensus 156 ~D~d~dG~I~~~Ef~~~~~-~~~~~~~~l~~ 185 (190)
T 2l2e_A 156 MDKNKDGQLTLEEFCEGSK-RDPTIVSALSL 185 (190)
T ss_dssp HTCCSSCCBCHHHHHHHHH-TCTHHHHHHHT
T ss_pred hCCCCCCcCcHHHHHHHHH-hCcHHHHHHHH
Confidence 3444567777777766554 56666666553
No 69
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=68.56 E-value=7.5 Score=32.11 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++-|-+-...|+....+|--+++-.++. -|-+++.|.-.|-+|..||--|=+-+.+.|-.++++-+.+- .-.|-.
T Consensus 18 ~~~~~~LN~~i~~El~a~~~Yl~~a~~~~~~gl~~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p-~~~~~~ 96 (181)
T 3bvf_A 18 KDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAP-EHKFEG 96 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 4577888888899999999999888877554 58999999999999999999999999999999988887765 334556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhcc
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqD 262 (311)
+.=++=+..=-||.---.|-.+...-++.-+ +...++|+..-.|
T Consensus 97 ~~e~le~aL~~E~~~~~~~~~l~~~A~~~~D---~~t~~~l~~~l~e 140 (181)
T 3bvf_A 97 LTQIFQKAYEHEQHISESINNIVDHAIKSKD---HATFNFLQWYVAE 140 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHH
Confidence 7777777788888877778888887777644 4555556655555
No 70
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=68.34 E-value=5.1 Score=29.65 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=27.1
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
|.|+.-++--+||...+..+....-..=++-+.+.+-.. +|.|-|.|..+-++
T Consensus 97 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 97 DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred CcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence 555555565666655554432222222234444444445 67666666666554
No 71
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=68.27 E-value=0.75 Score=39.85 Aligned_cols=149 Identities=17% Similarity=0.240 Sum_probs=88.8
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFL 189 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFl 189 (311)
.|||.-|.--+-|-+.+..++. -.+-|..+-..|-.- --.|...++.-++. .|.|+.+|.-.|..|..||.-.
T Consensus 3 ~~~~~~~~~~~~~f~~~~~i~~-----T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~EG~~~IA~~F~~~A~~E~~HA~r~ 77 (179)
T 3qhb_A 3 NYNQEDFMGLDRFFQDAVSHNN-----TDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLL 77 (179)
T ss_dssp SSCCCCGGGGGGGCCCCCCCSS-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHhHHHHHHHhcccCc-----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5788877766655444444443 356677777777666 33555555555444 8999999999999999999988
Q ss_pred hhhhcccccccc------cccccccCcccccCchhhhhhhh------cc--------c-ccchhhHHHHHHHhhhCCCCc
Q 021562 190 NKGLSDFNYALD------LGFLTKARKYTFFKPKFIFYATY------LS--------E-KIGYWRYITIYRHLKANPEFQ 248 (311)
Q Consensus 190 Nkal~Df~l~lD------LgfLtk~k~YTfF~PkfIfYAtY------LS--------E-KIGYwRYItIyRHLe~~Pe~r 248 (311)
-+.|........ +..+. .-.| |..++=.|- |- | .-.|-.|+-+=| +--
T Consensus 78 ~kll~~l~~~~~~~~~~~~~~v~-~~~~----p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~------eEG 146 (179)
T 3qhb_A 78 TKLYSELEVKDSAETLEAKRLVS-TIES----QIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAA------EQG 146 (179)
T ss_dssp HHHSTTCCCCCCHHHHHHHHHHH-HHHH----THHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH------HTT
T ss_pred HHHHhcccccccccccccccccc-cccc----cccccCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH------HCC
Confidence 888876432210 00000 1111 111111110 00 0 011333333322 223
Q ss_pred ccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 249 CYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 249 f~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
+--|=++|+.=+.+|-+|++-|..++..
T Consensus 147 ~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 147 NMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5568899999999999999999988764
No 72
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=68.06 E-value=2.1 Score=37.03 Aligned_cols=61 Identities=20% Similarity=0.259 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 135 LRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 135 ~r~~FidFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
+.+--.+-|+.+...|--- --.|.+..+.-+.. ++.++..|..++.+|.+|+.-..++|..
T Consensus 112 T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 112 DSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444577777777653 35688887777655 8999999999999999999999888764
No 73
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=67.60 E-value=16 Score=28.46 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=35.2
Q ss_pred ccCCcccccChhHHHHhh--------cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
|.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.+..
T Consensus 121 D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~~ 193 (207)
T 2ehb_A 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS-LNPSLIKNMTL 193 (207)
T ss_dssp CTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HCGGGGGGGCC
T ss_pred CCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHhcc
Confidence 445555566666655442 344443333333333445555677777777776664 46666555544
No 74
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=66.69 E-value=10 Score=28.92 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
+++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 64 ~~~~~f~~~--D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~ 126 (190)
T 2l2e_A 64 FAEYVFNVF--DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126 (190)
T ss_dssp HHHHHHHHH--CSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred HHHHHHHHh--cCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence 344444433 455555566667766665543211111222233444556678888888776553
No 75
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=65.93 E-value=6.2 Score=27.64 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=45.4
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc---c-----cChhHHHHhhccccc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK---K-----TNPVVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk---~-----~nP~lae~F~lMaRD 181 (311)
|.|+.-.+.-+||...+..+.....+.-++-+-+.+-..-+|.|-|.|...-+. . ....+.++|..+-+|
T Consensus 10 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d 87 (134)
T 1jfj_A 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVD 87 (134)
T ss_dssp CTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCC
Confidence 555666666677766666654444455566667777778889999999887663 1 123466677666554
No 76
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=65.11 E-value=9.7 Score=28.89 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=35.6
Q ss_pred ccCCcccccChhHHHHhhcC------------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
|.|..-.+--+||...+..+ +++.-..-++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.|+.
T Consensus 102 D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~l~~ 178 (183)
T 1s6c_A 102 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ-EDDNIMRSLQL 178 (183)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT-SCCHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh-cChHHHHHHHH
Confidence 55555566666776554432 1111112333344444555678888888877664 57777777664
No 77
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=64.47 E-value=9.4 Score=27.91 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhH
Q 021562 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVV 171 (311)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~l 171 (311)
.++.+.+..-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... ...+
T Consensus 19 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 98 (161)
T 3fwb_A 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEI 98 (161)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHH
Confidence 3344444444432 66777777777776666654322223335555566666667877777765444321 3457
Q ss_pred HHHhhccccchhhhhhhhh
Q 021562 172 AEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (311)
.++|..+-+| +-|+|+
T Consensus 99 ~~~F~~~D~d---~~G~i~ 114 (161)
T 3fwb_A 99 KRAFQLFDDD---HTGKIS 114 (161)
T ss_dssp HHHHHHHCTT---CSSEEC
T ss_pred HHHHHHHcCC---CCCeEe
Confidence 7778776554 345554
No 78
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=63.96 E-value=2.8 Score=35.39 Aligned_cols=61 Identities=15% Similarity=0.045 Sum_probs=43.6
Q ss_pred HHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccc
Q 021562 141 EFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD 201 (311)
Q Consensus 141 dFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD 201 (311)
+=|+.+.-.|--. --.|+++.+.-+.. ++.++.+|..++.||.+|+..+.++|....-+-|
T Consensus 70 enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~ 132 (170)
T 3pwf_A 70 ENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGED 132 (170)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4444444555432 34566666555443 8999999999999999999999999987754444
No 79
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=63.31 E-value=22 Score=28.65 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=34.1
Q ss_pred ccCCcccccChhHHHHhh--------cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (311)
|.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.+..
T Consensus 132 D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~~~ 204 (226)
T 2zfd_A 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL-RHPSLLKNMTL 204 (226)
T ss_dssp CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH-HSGGGGGGGCC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHhch
Confidence 555555566666655442 233333333333223344455567777777766654 46666555543
No 80
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=61.37 E-value=8.5 Score=29.67 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa 179 (311)
+++..+...| |.|+.-++--+||...+..+-...-..-++-+.+.+-..=+|.|-|.|...-+....+.+.++|..+-
T Consensus 50 ~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D 127 (150)
T 2jjz_A 50 TAFKEKYMEF--DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFE 127 (150)
T ss_dssp HHHHHHHTTS--CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77777788888887777655322112223444455555668999999998888766888999999877
Q ss_pred cc
Q 021562 180 RD 181 (311)
Q Consensus 180 RD 181 (311)
.|
T Consensus 128 ~d 129 (150)
T 2jjz_A 128 GK 129 (150)
T ss_dssp --
T ss_pred CC
Confidence 65
No 81
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=61.19 E-value=7.4 Score=27.99 Aligned_cols=87 Identities=11% Similarity=0.229 Sum_probs=48.8
Q ss_pred HHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----------Ch
Q 021562 101 EFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----------NP 169 (311)
Q Consensus 101 E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----------nP 169 (311)
+.+.+..-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+... -.
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 88 (153)
T 3ox6_A 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVK 88 (153)
T ss_dssp HHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHH
Confidence 34444444432 55666677777887766655322223334445556666678888888876554221 13
Q ss_pred hHHHHhhccccchhhhhhhhh
Q 021562 170 VVAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 170 ~lae~F~lMaRDEARHAGFlN 190 (311)
.+.++|..+-+| +-|+|+
T Consensus 89 ~~~~~F~~~D~d---~~G~i~ 106 (153)
T 3ox6_A 89 ELRDAFREFDTN---GDGEIS 106 (153)
T ss_dssp HHHHHHHHHCTT---CSSSBC
T ss_pred HHHHHHHHhCCC---CCCcCc
Confidence 467778766544 345543
No 82
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=60.70 E-value=8.4 Score=29.12 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=45.9
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
|.|..-.+--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..+.+.++|..+-+| +-|.|+.
T Consensus 82 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 155 (167)
T 1gjy_A 82 DSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV-KLRALTDSFRRRDSA---QQGMVNF 155 (167)
T ss_dssp CTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH-HHHHHHHHHHHHCTT---CCSEEEE
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCeeEEe
Confidence 777777888888877766543221111222222333 4578888888877664 347788888877655 4566654
Q ss_pred h
Q 021562 192 G 192 (311)
Q Consensus 192 a 192 (311)
.
T Consensus 156 ~ 156 (167)
T 1gjy_A 156 S 156 (167)
T ss_dssp E
T ss_pred e
Confidence 3
No 83
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=60.53 E-value=6.9 Score=30.65 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=51.7
Q ss_pred cccHHHHHHHHHH-------Hh-hccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 96 KLNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 96 ~~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
....+||.+++.. |+ -|.|+.-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. .
T Consensus 89 ~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~-~ 165 (198)
T 1juo_A 89 TMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV-K 165 (198)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH-H
T ss_pred eECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH-H
Confidence 3455666655443 22 2677777777778877665442221112222333333 4478888888777654 3
Q ss_pred ChhHHHHhhccccchhhhhhhhhhh
Q 021562 168 NPVVAEIFSLMSRDEARHAGFLNKG 192 (311)
Q Consensus 168 nP~lae~F~lMaRDEARHAGFlNka 192 (311)
.+.+.++|..+-+| +-|.|+..
T Consensus 166 ~~~~~~~F~~~D~d---~~G~is~~ 187 (198)
T 1juo_A 166 LRALTDSFRRRDTA---QQGVVNFP 187 (198)
T ss_dssp HHHHHHHHHHTCTT---CCSEEEEE
T ss_pred HHHHHHHHHHhCCC---CCCeEeec
Confidence 36777888877654 45666543
No 84
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=60.38 E-value=10 Score=31.44 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=50.9
Q ss_pred ChHHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHH
Q 021562 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKEL 160 (311)
Q Consensus 81 DFd~m~~lf~~~id~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl 160 (311)
+++++.+++..-.......++++.++..+ |.|..-.+--+||...+..+.......=+..+-+-+-..=+|.|-+.|+
T Consensus 110 ~~~ef~~~l~~~~~~~~~~~~~~~~f~~~--D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef 187 (256)
T 2jul_A 110 DEDTFKLIYSQFFPQGDATTYAHFLFNAF--DADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187 (256)
T ss_dssp EHHHHHHHHHHHCCSSCCHHHHHHHHHHS--SCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHH
T ss_pred CHHHHHHHHHHHcccCCcHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 45555444322112344556677777765 4555556666777655544311111222233334555666777777776
Q ss_pred hhhhcc-----------------cChhHHHHhhccccc
Q 021562 161 GRRLKK-----------------TNPVVAEIFSLMSRD 181 (311)
Q Consensus 161 ~rrlk~-----------------~nP~lae~F~lMaRD 181 (311)
..=++. ....+.++|..+-+|
T Consensus 188 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d 225 (256)
T 2jul_A 188 LAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225 (256)
T ss_dssp HHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCC
Confidence 654432 124566677666554
No 85
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=60.18 E-value=21 Score=25.50 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChh-HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-------hh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-------PV 170 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-------P~ 170 (311)
++|+..+...+ |.|+.-.+--+||...+..+... ........+.. .-+|.|-|.|...-+.... ..
T Consensus 4 ~~el~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 77 (145)
T 2bl0_B 4 ADQIQECFQIF--DKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ----LNAKEFDLATFKTVYRKPIKTPTEQSKE 77 (145)
T ss_dssp HHHHHHHHHHH--CTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH----HTSSEECHHHHHHHHTSCCCCGGGGHHH
T ss_pred HHHHHHHHHHh--CCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh----cCCCeEcHHHHHHHHHHHhhcCcccHHH
Confidence 34566666655 66677777778887666544211 12222222222 5678888888776664432 46
Q ss_pred HHHHhhccccchhhhhhhhh
Q 021562 171 VAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (311)
+.++|..+-+| +-|+|+
T Consensus 78 l~~~F~~~D~d---~~G~i~ 94 (145)
T 2bl0_B 78 MLDAFRALDKE---GNGTIQ 94 (145)
T ss_dssp HHHHHHHHCSS---SSSEEE
T ss_pred HHHHHHHhCCC---CCCeEc
Confidence 77888776554 345544
No 86
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=60.09 E-value=14 Score=33.03 Aligned_cols=143 Identities=12% Similarity=0.082 Sum_probs=70.4
Q ss_pred HHhhcCChhHHHHHHHHHHhhhh-cc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccc-----
Q 021562 126 EAADKMQGPLRQIFVEFLERSCT-AE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY----- 198 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScT-aE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l----- 198 (311)
++|..|+++.|.. +..+-.--| ++ ..|--+...++.-+ .+|++.-.+...+=.|+.|+-.-..-+.-++.
T Consensus 50 ~dw~~L~~~Er~~-~~~~l~~~~~~D~iv~~~l~~~~~~~v--~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~ 126 (286)
T 3olj_A 50 QHWESLKPEERYF-ISHVLAFFAASDGIVNENLVERFSQEV--QITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKER 126 (286)
T ss_dssp HHHHHSCHHHHHH-HHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHhCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4667788877773 333221111 11 01111222333434 58999988999999999999776555544432
Q ss_pred ------ccccccccccCcc----------cccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhcc
Q 021562 199 ------ALDLGFLTKARKY----------TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (311)
Q Consensus 199 ------~lDLgfLtk~k~Y----------TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqD 262 (311)
..+...|.|+-++ +|. -+.|-+ ++-|.|-|-=..+..-.|.++. ..--+=+=.+-=+.|
T Consensus 127 ~~~f~~~~~~p~l~~K~~~~~~~~~~~~~~~~-~~lva~--~~lEgi~f~~~F~~~~~l~~~g--~m~g~~~~i~~I~RD 201 (286)
T 3olj_A 127 EFLFNAIETMPCVKKKADWALRWIGDKEATYG-ERVVAF--AAVEGIFFSGSFASIFWLKKRG--LMPGLTFSNELISRD 201 (286)
T ss_dssp HHHHTHHHHCGGGHHHHHHHHHHHHCSSSCHH-HHHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhCChhHHH-HHHHHH--HHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHHH
Confidence 2334445443211 010 011211 1344443322222222443321 111111222344679
Q ss_pred ccchhhHHHHHHhh
Q 021562 263 ENRHGDFFSALMKA 276 (311)
Q Consensus 263 EnRHGdfFa~lmra 276 (311)
|..||++...+.+.
T Consensus 202 E~~H~~~~~~l~~~ 215 (286)
T 3olj_A 202 EGLHCDFACLMFKH 215 (286)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988763
No 87
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=59.99 E-value=9 Score=28.46 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=50.2
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (311)
.+.+..++++.++..+ |.|..-.+-=+||...+... .......-+.-+-+.+-..=+|.|-..|+.+-++..
T Consensus 58 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~ 135 (169)
T 3qrx_A 58 GFEPKKEEIKKMISEI--DKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT 135 (169)
T ss_dssp SCCCCHHHHHHHHHHH--CSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC
T ss_pred CCCCCHHHHHHHHHHh--cCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC
Confidence 5566677888888877 55555566667776554432 111111222222334456678888888887766433
Q ss_pred ChhHHHHhhccccc
Q 021562 168 NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 nP~lae~F~lMaRD 181 (311)
...+.++|..+-.|
T Consensus 136 ~~~~~~~~~~~D~~ 149 (169)
T 3qrx_A 136 EEELQEMIAEADRN 149 (169)
T ss_dssp HHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhCCC
Confidence 24577777766554
No 88
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=59.70 E-value=26 Score=27.36 Aligned_cols=62 Identities=24% Similarity=0.229 Sum_probs=34.9
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
....++++.++..+ |.|..-.+--+||...+..+ .+.++.|-.| -..-+|.|-..|+.+-++
T Consensus 59 ~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~e~~~~l~ 120 (191)
T 1y1x_A 59 PFSLATTEKLLHMY--DKNHSGEITFDEFKDLHHFI-LSMREGFRKR-----DSSGDGRLDSNEVRAALL 120 (191)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTSSSCBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCeEcHHHHHHHHH
Confidence 44556666666655 44444455556665554432 3445555432 445567777777776654
No 89
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=59.16 E-value=9.6 Score=28.32 Aligned_cols=77 Identities=16% Similarity=0.194 Sum_probs=43.5
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHHHhhccccchhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARH 185 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae~F~lMaRDEARH 185 (311)
|.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+| +
T Consensus 38 D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d---~ 114 (169)
T 3qrx_A 38 DTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDD---N 114 (169)
T ss_dssp CTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---C
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCC---C
Confidence 6666666666777666555432222233444445555556777777776655432 134567778776554 4
Q ss_pred hhhhhh
Q 021562 186 AGFLNK 191 (311)
Q Consensus 186 AGFlNk 191 (311)
-|+|+.
T Consensus 115 ~G~i~~ 120 (169)
T 3qrx_A 115 SGTITI 120 (169)
T ss_dssp SSSBCH
T ss_pred CCcCCH
Confidence 555543
No 90
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=59.04 E-value=11 Score=27.26 Aligned_cols=66 Identities=20% Similarity=0.271 Sum_probs=38.8
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
..+++..+...+ |.|..-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-++
T Consensus 74 ~~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 74 PEDVIRNAFACF--DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp CHHHHHHHHTTS--CSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred cHHHHHHHHHHH--CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 334444444433 666777777778877776554333333344455555555677777777776664
No 91
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=58.27 E-value=11 Score=28.40 Aligned_cols=76 Identities=17% Similarity=0.290 Sum_probs=49.6
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
|.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+. ....+.++|..+-+| +-|+|..
T Consensus 84 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~dG~i~~ 159 (172)
T 2znd_A 84 DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-VLQRLTDIFRRYDTD---QDGWIQV 159 (172)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HHHHHHHHHHHHCTT---SSSCCCC
T ss_pred CCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeEee
Confidence 777777788888877766553333333455555566666688888888877664 236778888877554 4566643
No 92
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=58.02 E-value=4.6 Score=31.18 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa 179 (311)
+++..+...| |.|..-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+....+.+.+.|..+-
T Consensus 48 ~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~~D 125 (147)
T 1wy9_A 48 EAFKVKYMEF--DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMILMYE 125 (147)
T ss_dssp HHHHHHHTTS--CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGGCC
T ss_pred HHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77777778778887776655322222234444455556668999999988877655677888888776
Q ss_pred cch
Q 021562 180 RDE 182 (311)
Q Consensus 180 RDE 182 (311)
+|-
T Consensus 126 ~d~ 128 (147)
T 1wy9_A 126 EKN 128 (147)
T ss_dssp CC-
T ss_pred cCC
Confidence 653
No 93
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=56.91 E-value=15 Score=27.97 Aligned_cols=63 Identities=10% Similarity=0.233 Sum_probs=33.0
Q ss_pred ccCCcccccChhHHHHhhcC---------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHh
Q 021562 112 DYNQTHFVRNKEFKEAADKM---------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l---------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F 175 (311)
|.|..-++--+||...+..+ +++.-+..++-+.+.+-..=+|.|-|.|..+-++ .+|.+.++|
T Consensus 108 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~ 179 (183)
T 1dgu_A 108 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSF 179 (183)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC-SSCHHHHCC
T ss_pred CCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-hChHHHHhc
Confidence 55555556666665544432 2222222222344445555567777777776664 466665554
No 94
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=56.43 E-value=5.5 Score=31.51 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccc-hhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 021562 139 FVEFLERSCTAEFSG-FLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (311)
Q Consensus 139 FidFLerScTaEFSG-flLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (311)
-.+-|+.+.-.|-.- --.|+++.+.-++ ..+.++++|..++.||.+|+..+.+.|...
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i 140 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL 140 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777778777 4788877776543 389999999999999999999999988753
No 95
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=56.41 E-value=23 Score=26.90 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=35.5
Q ss_pred ccCCcccccChhHHHHhhc----------CChh--HHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHh
Q 021562 112 DYNQTHFVRNKEFKEAADK----------MQGP--LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~----------l~~~--~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F 175 (311)
|.|..-.+--+||...+.. ++.+ ....-++-+-+.+-..=+|.|-|.|+.+-+. ++|.+.++|
T Consensus 109 D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~ 183 (193)
T 1bjf_A 109 DLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK-SDPSIVRLL 183 (193)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH-HCTHHHHTT
T ss_pred CCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh-cCHHHHHHh
Confidence 5566666666677654432 3321 1222333333445555677788888777664 567777766
No 96
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=55.92 E-value=11 Score=26.90 Aligned_cols=84 Identities=18% Similarity=0.160 Sum_probs=47.1
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (311)
...+..++++.++..+ |.|..-.+-=+||...+..+ .......-+.-+-+.+-..=+|.|-..|+.+-++.-
T Consensus 41 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~ 118 (147)
T 4ds7_A 41 GLSPSEAEVADLMNEI--DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118 (147)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCC
Confidence 4456667777777776 55555556666775544322 111111222222244455668888888887766533
Q ss_pred ChhHHHHhhccc
Q 021562 168 NPVVAEIFSLMS 179 (311)
Q Consensus 168 nP~lae~F~lMa 179 (311)
...+.++|..+.
T Consensus 119 ~~~~~~~~~~~d 130 (147)
T 4ds7_A 119 DAEVDEMLREVS 130 (147)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 245666777664
No 97
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=55.40 E-value=31 Score=25.77 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=45.5
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
|.|..-.+--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..+.+.++|..+-+| +-|+|..
T Consensus 80 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 153 (165)
T 1k94_A 80 DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCV-KLRALTDFFRKRDHL---QQGSANF 153 (165)
T ss_dssp CTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHH-HHHHHHHHHHTTCTT---CCSEEEE
T ss_pred CCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeEee
Confidence 777777888888877766542211111122222223 4578899988877664 337788888887655 4566543
No 98
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=55.31 E-value=30 Score=27.48 Aligned_cols=87 Identities=16% Similarity=0.263 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHH------HHHHHHHhhhhccccchhhHHHHhhhhc--------
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQ------IFVEFLERSCTAEFSGFLLYKELGRRLK-------- 165 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~------~FidFLerScTaEFSGflLyKEl~rrlk-------- 165 (311)
+++..+...+ |.|+.-.+--+||...+..+....-. ..++-+.+.+-..=+|.|-|.|...-+.
T Consensus 16 ~~l~~~F~~~--D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~ 93 (263)
T 2f33_A 16 SQFFEIWLHF--DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLL 93 (263)
T ss_dssp HHHHHHHHHH--CTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHH
T ss_pred HHHHHHHHHh--CCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHH
Confidence 4455555544 44555556666665554433111110 2333333444555577777777765442
Q ss_pred ------ccChhHHHHhhccccchhhhhhhhhh
Q 021562 166 ------KTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 166 ------~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
.....+.++|..+-+| +-|+|+.
T Consensus 94 ~~~~~~~~~~~l~~~F~~~D~d---~~G~i~~ 122 (263)
T 2f33_A 94 FRCQQLKSCEEFMKTWRKYDTD---HSGFIET 122 (263)
T ss_dssp HGGGTSSCHHHHHHHHTTSSTT---TCSSBCH
T ss_pred HHHhhccHHHHHHHHHHHHCCC---CCCCcCH
Confidence 2235678889887665 5666553
No 99
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=55.21 E-value=27 Score=27.18 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhh-ccC--CcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hh
Q 021562 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (311)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~ 170 (311)
+|++.+.+-|.. |.| +.-.+--+||...+.. .+......++-+-+.+-..-+|.|-|.|...-+.... ..
T Consensus 34 ~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~ 112 (207)
T 2ehb_A 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK 112 (207)
T ss_dssp HHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHH
T ss_pred HHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHH
Confidence 344444444432 544 6677777788766544 2222223344444555666788999988877665332 23
Q ss_pred HHHHhhccccc
Q 021562 171 VAEIFSLMSRD 181 (311)
Q Consensus 171 lae~F~lMaRD 181 (311)
+.++|..+-+|
T Consensus 113 l~~~F~~~D~d 123 (207)
T 2ehb_A 113 VKFAFKLYDLR 123 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 77778766554
No 100
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=54.92 E-value=19 Score=29.53 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=108.0
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhcccC---hhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKTN---PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~n---P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (311)
..++-|-+=...|+...-.|--+++-..+.+ |-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+-..-.|=
T Consensus 11 ~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~~ 90 (174)
T 2v2p_A 11 EVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDEWG 90 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccC
Confidence 4677778888999999999999999887644 9999999999999999999998999999999999998765233444
Q ss_pred CchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhh-hccccchhhHHHHHHh
Q 021562 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALMK 275 (311)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~W-CqDEnRHGdfFa~lmr 275 (311)
.+.=++=+.+=-||.---+|-.++..-+++-|+. ..+|++.| -.++-.|-+-+.-++.
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~~l~eq~e~~~~l~~~l~ 149 (174)
T 2v2p_A 91 TTPDAMKAAIVLEKSLNQALLDLHALGSAQADPH---LCDFLESHFLDEEVKLIKKMGDHLT 149 (174)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888888899999999999999988876554 45556653 4666777776665554
No 101
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=54.67 E-value=19 Score=26.55 Aligned_cols=70 Identities=20% Similarity=0.185 Sum_probs=33.5
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
...+..++++.++..+ |.|..-.+--+||...+..+....+..-+..+-+.+-..=+|.|-..|+.+-++
T Consensus 57 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~ 126 (166)
T 2aao_A 57 GANLKESEILDLMQAA--DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126 (166)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3344455666666655 344444455556655544432211111222222333445566666666666553
No 102
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=54.62 E-value=24 Score=28.16 Aligned_cols=88 Identities=20% Similarity=0.338 Sum_probs=54.3
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhh----------cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh---
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL--- 164 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl--- 164 (311)
..+++..+...| |-|..-.+--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+
T Consensus 9 ~~~~l~~~F~~~--D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 86 (272)
T 2be4_A 9 DAAGFLQIWQHF--DADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86 (272)
T ss_dssp CHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred CHHHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence 345677777666 667777787788876655 44544444444444455556667888888876652
Q ss_pred -------------cccChhHHHHhhccccchhhhhhhhh
Q 021562 165 -------------KKTNPVVAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 165 -------------k~~nP~lae~F~lMaRDEARHAGFlN 190 (311)
......+.++|..+-+| +-|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~i~ 122 (272)
T 2be4_A 87 EENFLLIFRREAPLDNSVEFMKIWRKYDAD---SSGYIS 122 (272)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHCTT---CCSEEE
T ss_pred hHHHHHHHhhccCcccHHHHHHHHHHhCCC---CCCccC
Confidence 22335677888877554 355554
No 103
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=54.19 E-value=20 Score=29.37 Aligned_cols=136 Identities=12% Similarity=0.048 Sum_probs=109.2
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (311)
+..++-|-+=...|+...-.|--+++-..+. -|-+++.|.-.|.+|-.||--|=+-+.+.|-.++|+-+.+-..-.|
T Consensus 11 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~ 90 (173)
T 1rcd_A 11 QDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDDW 90 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcccc
Confidence 3467778888899999999999999888652 5999999999999999999999999999999999999877533444
Q ss_pred cCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhh-ccccchhhHHHHHHh
Q 021562 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWC-QDENRHGDFFSALMK 275 (311)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WC-qDEnRHGdfFa~lmr 275 (311)
=.|.=++=+.+=-||.---+|-.++..-+++-|+ ...+|+++|. .++-.|-+-+.-++.
T Consensus 91 ~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~---~t~~fLe~~~l~eq~e~~~~l~~~l~ 150 (173)
T 1rcd_A 91 ANGLEALQTALKLQKSVNQALLDLHAVAADKSDP---HMTDFLESPYLSESVETIKKLGDHIT 150 (173)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888889999999999999999887554 4556677564 556777766665543
No 104
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=54.07 E-value=7 Score=26.07 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-+.
T Consensus 4 ~l~~~F~~~--D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 4 DMERIFKRF--DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHHH--CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 344444444 445555555555554443321 11112234444555566688888888877665
No 105
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=53.92 E-value=36 Score=24.32 Aligned_cols=72 Identities=17% Similarity=0.056 Sum_probs=41.1
Q ss_pred cccccHHHHHHHHHHHhh-ccCCcccccChhHHHHhhcC---ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 94 NKKLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
...+..++++.++..+.. |.|. -.+-=++|...+... .+.....-+.-+-+.+-..-+|.|-..|+.+-++.
T Consensus 38 ~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 38 GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT 113 (149)
T ss_pred CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHH
Confidence 445556788888887732 6666 566667776655543 11111111222223445566888888888776643
No 106
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=51.95 E-value=12 Score=27.51 Aligned_cols=16 Identities=25% Similarity=0.237 Sum_probs=8.0
Q ss_pred ccccchhhHHHHhhhh
Q 021562 149 AEFSGFLLYKELGRRL 164 (311)
Q Consensus 149 aEFSGflLyKEl~rrl 164 (311)
..=+|+|-..|+.+=+
T Consensus 96 ~d~~G~I~~~el~~~l 111 (153)
T 2ovk_B 96 EDGQGFIPEDYLKDLL 111 (153)
T ss_dssp SSCSSCCCHHHHHHHH
T ss_pred CCCCCeEcHHHHHHHH
Confidence 3445555555555444
No 107
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=50.86 E-value=13 Score=30.35 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=69.5
Q ss_pred HHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc
Q 021562 101 EFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (311)
Q Consensus 101 E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa 179 (311)
|++.+.+-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+.. -..+.++|..+-
T Consensus 49 e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-~~~l~~~F~~~D 127 (220)
T 3sjs_A 49 QYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF-MELAYNLFVMNA 127 (220)
T ss_dssp HHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-HHHHHHHHHHHC
Confidence 44444333432 6667777777778766555432222334444555555566788888887765542 256788888776
Q ss_pred cchhhhhhhhh-----hhhcccccccccccccccCcccccCchhhhhhhhcccccchhhHHHHHHHhh
Q 021562 180 RDEARHAGFLN-----KGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK 242 (311)
Q Consensus 180 RDEARHAGFlN-----kal~Df~l~lDLgfLtk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe 242 (311)
+| +-|+|+ ++|+..|..++-.-+. ..+=...==..+|.|--|+.+...+.
T Consensus 128 ~d---~~G~I~~~El~~~l~~~g~~~~~~~~~----------~l~~~~dd~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 128 RA---RSGTLEPHEILPALQQLGFYINQRTSL----------LLHRLFARGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp CS---STTEECHHHHHHHHHHHTCCCCHHHHH----------HHHHHHC--CCSEEHHHHHHHHHHHH
T ss_pred CC---CCCCCcHHHHHHHHHHhCCCCCHHHHH----------HHHHHhcCCCCcCcHHHHHHHHHHHH
Confidence 65 456654 3566666544322111 00101111124677877777777664
No 108
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=50.53 E-value=24 Score=26.64 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=29.6
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
..++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-+
T Consensus 54 ~~~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~ 118 (183)
T 1s6c_A 54 ASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 118 (183)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred hHHHHHHHHHHh--CCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 334455555444 33333344445555444332111112222333334455566777777766554
No 109
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=50.46 E-value=14 Score=30.19 Aligned_cols=26 Identities=8% Similarity=0.115 Sum_probs=13.7
Q ss_pred cccchhhHHHHhhhhcccChhHHHHhh
Q 021562 150 EFSGFLLYKELGRRLKKTNPVVAEIFS 176 (311)
Q Consensus 150 EFSGflLyKEl~rrlk~~nP~lae~F~ 176 (311)
.=+|.|-|.|..+-++ ++|.+.+.|+
T Consensus 198 d~dG~Is~~EF~~~~~-~~~~~~~~~~ 223 (229)
T 3dd4_A 198 NKDGVVTIDEFIESCQ-KDENIMRSMQ 223 (229)
T ss_dssp SCSSBCCHHHHHHHHH-TCHHHHHHHH
T ss_pred CCCCcEeHHHHHHHHH-hCHHHHHHHH
Confidence 3355555555555443 4555555554
No 110
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=50.19 E-value=14 Score=27.90 Aligned_cols=73 Identities=11% Similarity=0.104 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHH
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAE 173 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae 173 (311)
.+++..+...| |.|..-++--+||...+..+. ...-..=++-+.+.+-..=+|.|-|.|..+-+++..|.+-+
T Consensus 39 ~~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 112 (135)
T 3h4s_E 39 VSELCKGFSLL--ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMME 112 (135)
T ss_dssp HHHHHHHHHHH--SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCHHHHH
Confidence 34555555555 777777888888988776554 12222234445555566668999999998888665555433
No 111
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=50.07 E-value=34 Score=24.98 Aligned_cols=87 Identities=10% Similarity=0.105 Sum_probs=50.2
Q ss_pred HHHHHHHHHh-hc-cCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc----------ccC
Q 021562 101 EFEALLQEFK-TD-YNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----------KTN 168 (311)
Q Consensus 101 E~~Aml~Efr-~D-yNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk----------~~n 168 (311)
+...+.+-|+ -| .|+.-.+--+||...+..+.......-++-|.+.+-..=+|.|-|.|...-+. ...
T Consensus 11 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 90 (158)
T 2jnf_A 11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 90 (158)
T ss_dssp HHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTS
T ss_pred HHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHH
Confidence 3333333343 26 66666677777766665443222233455555666666678888887765543 234
Q ss_pred hhHHHHhhccccchhhhhhhhh
Q 021562 169 PVVAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlN 190 (311)
..+.++|..+-+| +-|+|+
T Consensus 91 ~~~~~~F~~~D~d---~~G~I~ 109 (158)
T 2jnf_A 91 QELREAFRLYDKE---GNGYIS 109 (158)
T ss_dssp STHHHHHHHHCSS---SSSSEE
T ss_pred HHHHHHHHHhCCC---CCCeEc
Confidence 5688888877655 345544
No 112
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=49.71 E-value=18 Score=29.90 Aligned_cols=85 Identities=19% Similarity=0.284 Sum_probs=55.1
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCh
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNP 169 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP 169 (311)
...++|++.+...|..+ |+.-.+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|+..-+.. ...
T Consensus 87 ~~s~~ei~~l~~~fd~~-~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~ 165 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNE-CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE 165 (256)
T ss_dssp TSCHHHHHHHHHHHHHH-CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHH
T ss_pred CCCHHHHHHHHHHHHhh-CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHH
Confidence 34667888888888865 566777778888776654 22223344555555566677888888887665432 234
Q ss_pred hHHHHhhccccc
Q 021562 170 VVAEIFSLMSRD 181 (311)
Q Consensus 170 ~lae~F~lMaRD 181 (311)
.+.++|..+-.|
T Consensus 166 ~l~~~F~~~D~d 177 (256)
T 2jul_A 166 KLKWAFNLYDIN 177 (256)
T ss_dssp HHHHHHHHTCCS
T ss_pred HHHHHHHHhCCC
Confidence 678888765544
No 113
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=49.69 E-value=25 Score=29.24 Aligned_cols=135 Identities=12% Similarity=0.030 Sum_probs=108.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (311)
+..++.|-+=...|+...-+|=-+++-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.+-..-.|
T Consensus 15 ~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~ 94 (183)
T 2cih_A 15 QDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDCDDW 94 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCcccc
Confidence 4567888888899999999999999988763 4999999999999999999999899999999999999887654445
Q ss_pred cCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhh-hccccchhhHHHHHH
Q 021562 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALM 274 (311)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~W-CqDEnRHGdfFa~lm 274 (311)
=.|.=++=+.+=-||----+|-.++..-+++-|+. ..+|++.| -.++-.|-+-+.-++
T Consensus 95 ~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~fl~eq~e~~~~l~~~l 153 (183)
T 2cih_A 95 ESGLNAMECALHLEKNVNQSLLELHKLATDKNDPH---LCDFIETHYLNEQVKAIKELGDHV 153 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888899999999999999988876654 45556644 355566766666554
No 114
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=48.56 E-value=28 Score=26.96 Aligned_cols=69 Identities=17% Similarity=0.409 Sum_probs=29.2
Q ss_pred ccCCcccccChhHHHHhhcCC-hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCh--hHHHHhhccccc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP--VVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP--~lae~F~lMaRD 181 (311)
|-|..-.+--.|+...+..|. ..+.+++...+ ..+....+.--....+.+.++..++ .|.+.|...-+|
T Consensus 26 D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~-~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d 97 (153)
T 3i5g_B 26 DQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML-KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDED 97 (153)
T ss_dssp CCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH-HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHHTTCSS
T ss_pred CCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH-HhccCCccHHHHHHHHHhhhcccccHHHHHHHHhccccC
Confidence 555555555555555444331 11222333222 2222222222222233444443333 477778766554
No 115
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=48.49 E-value=25 Score=29.40 Aligned_cols=140 Identities=16% Similarity=0.196 Sum_probs=106.4
Q ss_pred HhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccc
Q 021562 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFL 205 (311)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfL 205 (311)
.|--+++ ..++-|-+-...|+...-.|--+++-..+. -|-+++.|.-.|.+|-.||--|=+-+.+.|-.++|+-+
T Consensus 7 ~~~m~~~----~v~~~LN~qin~EL~as~~Yl~~a~~f~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i 82 (184)
T 3qz3_A 7 EFFMLSQ----AMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAI 82 (184)
T ss_dssp --CCSCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCB
T ss_pred CeeecCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCC
Confidence 4444554 466777777888998888898888877544 58899999999999999999999999999999999998
Q ss_pred cccCcccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHH
Q 021562 206 TKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (311)
Q Consensus 206 tk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (311)
.+-+ -.+=.+.=++=+.+-.||.---.|-.++..-+++-|+.- .+|++..-.++-.|-+-+.-++
T Consensus 83 ~~p~-~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t---~~fLe~fl~EQve~~~~l~~~l 147 (184)
T 3qz3_A 83 AAPR-HDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYST---FNFLQWYVAEQHEEEKLFKGIL 147 (184)
T ss_dssp CCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 8866 345567778888888899999999999999888876654 4555522345566655555443
No 116
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=48.41 E-value=29 Score=24.80 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=46.2
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC--hhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ--GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~--~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (311)
...+..++++.++.. |..--+--+||...+.... ......-+.-+-+.+-..=+|.|-..|+.+=++..
T Consensus 35 ~~~~~~~~~~~~~~~-----~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~ 109 (145)
T 2bl0_B 35 GKNPTNAELNTIKGQ-----LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL 109 (145)
T ss_dssp TCCCCHHHHHHHHHH-----HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCC
T ss_pred CCCCCHHHHHHHHHh-----cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCC
Confidence 445556677777766 4444566667766665542 22222222222234455667888888777665432
Q ss_pred -ChhHHHHhhccccc
Q 021562 168 -NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 -nP~lae~F~lMaRD 181 (311)
...+.++|..+-.|
T Consensus 110 ~~~~~~~~~~~~d~~ 124 (145)
T 2bl0_B 110 TSSEVEELMKEVSVS 124 (145)
T ss_dssp CHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 23567777766554
No 117
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=47.72 E-value=38 Score=26.37 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=60.6
Q ss_pred cccHHHHHHHHHH-------Hh-hccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 96 KLNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 96 ~~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
....+||.+++.. |+ -|.|+.-++--+||...+..+....-..-++-+.+.+-.-=+|.|-|.|..+-+. .
T Consensus 79 ~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~-~ 157 (191)
T 1y1x_A 79 EITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI-F 157 (191)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-H
T ss_pred eEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-H
Confidence 3456677655532 21 2778888888899988877653332233344445555556689999999988775 4
Q ss_pred ChhHHHHhhccccchhhhhhhhhhhh
Q 021562 168 NPVVAEIFSLMSRDEARHAGFLNKGL 193 (311)
Q Consensus 168 nP~lae~F~lMaRDEARHAGFlNkal 193 (311)
.+.+.++|..+-+| +-|.|+-..
T Consensus 158 ~~~~~~~F~~~D~d---~dG~i~~~~ 180 (191)
T 1y1x_A 158 VCRVRNVFAFYDRE---RTGQVTFTF 180 (191)
T ss_dssp HHHHHHHHHHHCTT---CCSEEEEEH
T ss_pred HHHHHHHHHHhCcC---CCceEEeeH
Confidence 57888888887555 345544333
No 118
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=47.10 E-value=23 Score=26.76 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=41.0
Q ss_pred ccCCcccccChhHHHHhhcC-----------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----ChhHHHHh
Q 021562 112 DYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NPVVAEIF 175 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l-----------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-----nP~lae~F 175 (311)
|.|..-.+--+||...+..+ ....-...++-+-+.+-..=+|.|-|.|...-+... ...+.++|
T Consensus 50 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 129 (191)
T 3khe_A 50 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF 129 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 44444555555555444433 222333445555566666667888887776544221 23567777
Q ss_pred hccccchhhhhhhhh
Q 021562 176 SLMSRDEARHAGFLN 190 (311)
Q Consensus 176 ~lMaRDEARHAGFlN 190 (311)
..+-.| +-|+|+
T Consensus 130 ~~~D~d---~~G~I~ 141 (191)
T 3khe_A 130 QQFDSD---GSGKIT 141 (191)
T ss_dssp HHHCTT---CSSEEC
T ss_pred HHHCCC---CcCcCC
Confidence 776554 445554
No 119
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=46.61 E-value=34 Score=27.85 Aligned_cols=83 Identities=14% Similarity=0.253 Sum_probs=45.3
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChh-HHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChh
Q 021562 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPV 170 (311)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~ 170 (311)
..++|++.+.+.|..+ |+.-.+--+||...+..+-+. .....++-+-+.+-..=+|.|-+.|...-+.. ....
T Consensus 48 ~s~~ei~~l~~~Fd~~-d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~ 126 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNE-CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 126 (224)
T ss_dssp CCHHHHHHHHHHHHHH-CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHhh-CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHH
Confidence 4556777777777764 344556667777766655321 22233344444445556677766666544321 1235
Q ss_pred HHHHhhcccc
Q 021562 171 VAEIFSLMSR 180 (311)
Q Consensus 171 lae~F~lMaR 180 (311)
+.++|..+-.
T Consensus 127 l~~~F~~~D~ 136 (224)
T 1s1e_A 127 LRWTFNLYDI 136 (224)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHHcC
Confidence 6666665443
No 120
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=46.00 E-value=23 Score=25.24 Aligned_cols=81 Identities=10% Similarity=0.145 Sum_probs=49.8
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHH
Q 021562 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAE 173 (311)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae 173 (311)
+...+..-|+ -|.|+.-.+--+||...+..+....-..-++-+.+.+...-+|.|-|.|...-+.. ....+.+
T Consensus 9 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 88 (147)
T 4ds7_A 9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE 88 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHH
Confidence 3344444343 26777777777888777666543333444666667777778899988887654432 1245667
Q ss_pred Hhhccccc
Q 021562 174 IFSLMSRD 181 (311)
Q Consensus 174 ~F~lMaRD 181 (311)
+|..+-+|
T Consensus 89 ~F~~~D~d 96 (147)
T 4ds7_A 89 AFKVFDKN 96 (147)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCCC
Confidence 77766444
No 121
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=45.42 E-value=15 Score=27.81 Aligned_cols=26 Identities=8% Similarity=0.350 Sum_probs=21.9
Q ss_pred chhhHHhhccCCCCccccChHHHhhh
Q 021562 63 SNKTAIKETLLTPRFYTTDFDEMETL 88 (311)
Q Consensus 63 ~~k~a~~etlLtPRFYTTDFd~m~~l 88 (311)
.....+.+.|-.|-||.+|++++..+
T Consensus 36 ~~i~~le~~ladp~~y~~d~~~~~~l 61 (89)
T 2lw1_A 36 AKLEALQTQVADASFFSQPHEQTQKV 61 (89)
T ss_dssp HHHHHHHHHHHSTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHhCcccccCCHHHHHHH
Confidence 34566888899999999999998886
No 122
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=45.38 E-value=43 Score=22.51 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
+++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++..
T Consensus 11 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 11 ADRERIFKRF--DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 3444444444 777777777788877776654 2223335555556666668899999888766543
No 123
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=44.98 E-value=39 Score=25.08 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=17.3
Q ss_pred hccccchhhHHHHhhhhccc-----ChhHHHHhhcccc
Q 021562 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSR 180 (311)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~-----nP~lae~F~lMaR 180 (311)
-..-+|+|-..|+.+=++.- ...+.++|..+-.
T Consensus 105 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~ 142 (166)
T 2mys_B 105 DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142 (166)
T ss_pred CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCC
Confidence 44556666666666555422 2345555655433
No 124
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=44.96 E-value=44 Score=25.80 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=++
T Consensus 52 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~ 115 (198)
T 2r2i_A 52 KYVEQMFETF--DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777766 555555677778876665442222222333444555677789999999887664
No 125
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=44.94 E-value=35 Score=25.11 Aligned_cols=65 Identities=18% Similarity=0.263 Sum_probs=41.7
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
...+..+|++.|+.++ |.|..-.+-=+||...+... ..+.++.|--| -..=+|++-..|+.+=++
T Consensus 36 g~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~ 106 (143)
T 2obh_A 36 GFEPKKEEIKKMISEI--DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLF-----DDDETGKISFKNLKRVAK 106 (143)
T ss_dssp TCCCCHHHHHHHHHHH--TTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCSSSBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHH
Confidence 4456677888888877 55555566667786554322 12445555433 556689999999887654
No 126
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=44.73 E-value=4 Score=34.22 Aligned_cols=23 Identities=30% Similarity=0.743 Sum_probs=20.1
Q ss_pred cchhhHHHHHHHhhhCCCCcccc
Q 021562 229 IGYWRYITIYRHLKANPEFQCYP 251 (311)
Q Consensus 229 IGYwRYItIyRHLe~~Pe~rf~P 251 (311)
|-|.||++++-.|.+|||++=.+
T Consensus 63 ilymRy~~L~~kIpkHpdyk~~~ 85 (144)
T 2a9u_A 63 VLYMKYVTVYNLIKKRPDFKQQQ 85 (144)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHTH
T ss_pred HHHHHHHHHHHHHhcCcchhhhh
Confidence 78999999999999999987543
No 127
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=43.97 E-value=43 Score=27.23 Aligned_cols=63 Identities=16% Similarity=0.120 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-+
T Consensus 89 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l 151 (224)
T 1s1e_A 89 TYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 151 (224)
T ss_dssp HHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHHHh--cCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHH
Confidence 3344444433 44444445556666554433211112222333344455667777777777655
No 128
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=43.75 E-value=15 Score=27.63 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=46.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccccc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (311)
-.+-|+.....|-...-.|+++.+...+ ..|..++++.-+..||-+|+-+|...|.+.+..
T Consensus 86 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~ 147 (149)
T 2qqy_A 86 VREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKAMV 147 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455666777788778889998876543 579999999999999999999999998876543
No 129
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=43.46 E-value=38 Score=26.82 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 57 ~~~~~~f~~~--D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 120 (211)
T 2ggz_A 57 KHIDQVYNTF--DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM 120 (211)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHH--cCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777766 555556677777766655432222222333444556677799999999987664
No 130
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=43.38 E-value=29 Score=26.05 Aligned_cols=14 Identities=21% Similarity=0.320 Sum_probs=6.3
Q ss_pred cccchhhHHHHhhh
Q 021562 150 EFSGFLLYKELGRR 163 (311)
Q Consensus 150 EFSGflLyKEl~rr 163 (311)
.=+|.|-..|+.+-
T Consensus 96 d~~G~I~~~E~~~~ 109 (179)
T 2f2o_A 96 DGNGYISAAELRHV 109 (179)
T ss_dssp TCSSEECHHHHHHH
T ss_pred CCCCcCcHHHHHHH
Confidence 33444444444443
No 131
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=43.22 E-value=50 Score=24.91 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=48.0
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
|.|..-.+--+||...+..+....-..-++-+.+.+. .=+|.|-|.|..+-+. ....+.++|..+-+| +-|.|..
T Consensus 87 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 161 (173)
T 1alv_A 87 DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV-RLDAMFRAFKSLDKD---GTGQIQV 161 (173)
T ss_dssp CTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH-HHHHHHHHHHHHSSS---CCSEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeecH
Confidence 7777778888889877654422222223333444444 5688999998876664 346788888887665 4566554
Q ss_pred h
Q 021562 192 G 192 (311)
Q Consensus 192 a 192 (311)
.
T Consensus 162 ~ 162 (173)
T 1alv_A 162 N 162 (173)
T ss_dssp E
T ss_pred h
Confidence 3
No 132
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=42.43 E-value=23 Score=25.78 Aligned_cols=82 Identities=18% Similarity=0.327 Sum_probs=53.9
Q ss_pred ccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 93 id~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
+.+.+..++++.++..+ |.|..-.+-=+||...+... ..+.+..| +.+-..-+|+|-..|+.+=++.
T Consensus 52 ~~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~l~~ 124 (161)
T 3fwb_A 52 LGFELPKREILDLIDEY--DSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF-----QLFDDDHTGKISIKNLRRVAKE 124 (161)
T ss_dssp TTCCCCHHHHHHHHHHH--CTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH-----HHHCTTCSSEECHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHh--CcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH-----HHHcCCCCCeEeHHHHHHHHHH
Confidence 35667778899998887 44555556667786655432 12334444 3446677899999998886653
Q ss_pred -----cChhHHHHhhccccc
Q 021562 167 -----TNPVVAEIFSLMSRD 181 (311)
Q Consensus 167 -----~nP~lae~F~lMaRD 181 (311)
....+.++|..+..|
T Consensus 125 ~~~~~~~~~~~~~~~~~d~~ 144 (161)
T 3fwb_A 125 LGETLTDEELRAMIEEFDLD 144 (161)
T ss_dssp TTCCCCHHHHHHHHHTTCSS
T ss_pred hCCCCCHHHHHHHHHHhCCC
Confidence 345688888887665
No 133
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=42.32 E-value=59 Score=23.63 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=35.9
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC----hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
...+..++++.++..+ |.|..-.+--+||...+.... ......-+.-+-+.+-..=+|.|-..|+.+=++.
T Consensus 49 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~ 123 (161)
T 1dtl_A 49 GQNPTPEELQEMIDEV--DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA 123 (161)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTT
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3344556666666655 444555565566655443321 1111111222223345566788888887776643
No 134
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=42.28 E-value=75 Score=26.07 Aligned_cols=149 Identities=5% Similarity=-0.077 Sum_probs=106.4
Q ss_pred hcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc--c
Q 021562 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--L 205 (311)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--L 205 (311)
..|+++.++.-++-|-.-...|++..+-|+--...++..+ ..+.+.|.-.+-+|..||-=|-.-+...|-..+... +
T Consensus 20 ~~l~~~~~~~vi~~LN~~La~~~~~~~~~~~~hw~v~G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~ 99 (182)
T 1tjo_A 20 LRMDADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETL 99 (182)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Confidence 4578889999999999999999999999999999986553 568899999999999999999999999998888722 2
Q ss_pred ccc---Cccc--ccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhhCcch
Q 021562 206 TKA---RKYT--FFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (311)
Q Consensus 206 tk~---k~YT--fF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (311)
.+. +.+. +..++=++=...=.|+..=.+|=-+...-+..-+ +.--+.++.+-.++-.|-+++.+.+...|-.
T Consensus 100 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D---~~T~dll~~~l~~~Ek~~w~L~a~l~~~~~~ 176 (182)
T 1tjo_A 100 QAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGD---HATAHMLREGLIELEDDAHHIEHYLEDDTLV 176 (182)
T ss_dssp HHHCCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHHTSSCCSC
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCC---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 211 2221 2355555544444444333333333333344444 4455566777888999999999999865543
No 135
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=42.20 E-value=23 Score=25.97 Aligned_cols=15 Identities=13% Similarity=0.572 Sum_probs=7.4
Q ss_pred cccchhhHHHHhhhh
Q 021562 150 EFSGFLLYKELGRRL 164 (311)
Q Consensus 150 EFSGflLyKEl~rrl 164 (311)
.-+|.|-|.|..+-+
T Consensus 134 d~dg~i~~~eF~~~~ 148 (156)
T 1wdc_C 134 DLEGNVKYEDFVKKV 148 (156)
T ss_dssp CTTSEEEHHHHHHHH
T ss_pred CCCCcEeHHHHHHHH
Confidence 334555555554444
No 136
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=41.86 E-value=34 Score=24.43 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=48.3
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC----------ChhHHHHHHHHHHhhhhccccchhhHHHHhhh
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l----------~~~~r~~FidFLerScTaEFSGflLyKEl~rr 163 (311)
...+..++++.++..+-.| ..-.+-=+||...+... ..+.+..| +.+-..-+|.|-..|+.+=
T Consensus 41 ~~~~~~~~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~ 113 (153)
T 3ox6_A 41 GYMPTEMELIELSQQINMN--LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAF-----REFDTNGDGEISTSELREA 113 (153)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHH-----HHHCTTCSSSBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCC--CCccCcHHHHHHHHHHHhhccccccccHHHHHHHH-----HHhCCCCCCcCcHHHHHHH
Confidence 4566677888888877544 33445556775544321 12233444 3446677899999999876
Q ss_pred hcc------cChhHHHHhhccccc
Q 021562 164 LKK------TNPVVAEIFSLMSRD 181 (311)
Q Consensus 164 lk~------~nP~lae~F~lMaRD 181 (311)
++. ....+.++|..+-.|
T Consensus 114 l~~~~~~~~~~~~~~~~~~~~d~~ 137 (153)
T 3ox6_A 114 MRALLGHQVGHRDIEEIIRDVDLN 137 (153)
T ss_dssp HHHHHSSCCCHHHHHHHHHHHCSS
T ss_pred HHHHhcCCCCHHHHHHHHHHhCCC
Confidence 654 233566666665443
No 137
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=41.86 E-value=33 Score=26.95 Aligned_cols=82 Identities=12% Similarity=0.237 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhHHHH
Q 021562 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVAEI 174 (311)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~lae~ 174 (311)
+|..+...| |.|..-.+--.+|...+..+....-..-+.-|.+.+ +|.|-|.|...-+... ...+..+
T Consensus 58 ~l~~~F~~~--D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 3dtp_E 58 EFKEAFQLI--DQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNA 131 (196)
T ss_dssp HHHHHHHHH--CCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 444444443 555666666666766655542211111222222322 8888888876544321 2467888
Q ss_pred hhccccchhhhhhhhhh
Q 021562 175 FSLMSRDEARHAGFLNK 191 (311)
Q Consensus 175 F~lMaRDEARHAGFlNk 191 (311)
|..+-+| +-|+|+.
T Consensus 132 F~~~D~d---~~G~Is~ 145 (196)
T 3dtp_E 132 FNLFDEG---DGKCKEE 145 (196)
T ss_dssp HHTTCSS---SSCCBHH
T ss_pred HHHHCCC---CCCcCcH
Confidence 8877665 4566653
No 138
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=41.51 E-value=40 Score=24.97 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=23.5
Q ss_pred cchhhHHHHhhhhcc------cChhHHHHhhccccchhhhhhhhhh
Q 021562 152 SGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARHAGFLNK 191 (311)
Q Consensus 152 SGflLyKEl~rrlk~------~nP~lae~F~lMaRDEARHAGFlNk 191 (311)
+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 72 dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~I~~ 114 (166)
T 2mys_B 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPD---GKGSIKK 114 (166)
T ss_pred CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC---CCcceeH
Confidence 788888877654432 124678888877665 4566554
No 139
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=41.35 E-value=9.8 Score=34.70 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=64.5
Q ss_pred cchhhhhhhhhhhhcccccccccccc---cccCcccccCchhh--------hhhhhcccccchhhHHHHHHHhhhCCCCc
Q 021562 180 RDEARHAGFLNKGLSDFNYALDLGFL---TKARKYTFFKPKFI--------FYATYLSEKIGYWRYITIYRHLKANPEFQ 248 (311)
Q Consensus 180 RDEARHAGFlNkal~Df~l~lDLgfL---tk~k~YTfF~PkfI--------fYAtYLSEKIGYwRYItIyRHLe~~Pe~r 248 (311)
..|-.|....-+.|.++|++-+..-+ ...+.|+=+...++ +=+.+..|....|.|-.|-+.|++.+-
T Consensus 188 ~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~alaal~~~E~~~p~~y~~i~~~l~~~g~-- 265 (332)
T 3bjd_A 188 DEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEVGWGLAVFYITELVVPGNHEKLYRALLQAGL-- 265 (332)
T ss_dssp CGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC--
Confidence 45667888888999999988774221 11222333333332 223367788999999999999998542
Q ss_pred ccc-hhhhhhhhhccccchh-hHHHHHHhhCcc
Q 021562 249 CYP-IFKYFENWCQDENRHG-DFFSALMKAQPQ 279 (311)
Q Consensus 249 f~P-IFk~Fe~WCqDEnRHG-dfFa~lmraqP~ 279 (311)
-| -..||..|..=..+|| ..+..+|..-|.
T Consensus 266 -~~~~~~yf~~HI~lD~~H~~~~~~~ll~~~~~ 297 (332)
T 3bjd_A 266 -SEDQAEYYKVHISLVPPRAKREWQLIARRIPD 297 (332)
T ss_dssp -CTTTTHHHHHHHHHCC---CTTHHHHHTTTTC
T ss_pred -CcccchHHHHHHHHhHHHHHHHHHHHHHhCCC
Confidence 22 5589999998778999 888888887764
No 140
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=41.28 E-value=55 Score=26.09 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=40.3
Q ss_pred ccCCcccccChhHHHHhhcC----ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccc
Q 021562 112 DYNQTHFVRNKEFKEAADKM----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRD 181 (311)
| |+.-++--+|+...+..+ ....-..-++-+.+-+. .-+|.|-|.|..+-+. ..+.+.++|+.+-+|
T Consensus 86 D-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~-~~~~~~~~F~~~D~d 156 (174)
T 2i7a_A 86 Q-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLM-RLEAMAKTFRNLSKD 156 (174)
T ss_dssp C-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHH-HHHHHHHHHHHHCSS
T ss_pred c-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHH-HHHHHHHHHHHhCCC
Confidence 7 888888888888877766 22111222233333333 3478888887765443 236677778777665
No 141
>4g5o_E G-protein-signaling modulator 2; galphai, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 2.90A {Mus musculus} PDB: 4g5q_E* 4g5r_E*
Probab=41.24 E-value=6.5 Score=25.21 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=12.9
Q ss_pred hhHHHHHHhhCcchhh
Q 021562 267 GDFFSALMKAQPQFLN 282 (311)
Q Consensus 267 GdfFa~lmraqP~ll~ 282 (311)
-|||++++|+|.+-..
T Consensus 2 edffslilrsqakrmd 17 (26)
T 4g5o_E 2 EDFFSLILRSQAKRMD 17 (26)
T ss_dssp CCHHHHHHHHHHCSCG
T ss_pred chHHHHHHHHHHHhhh
Confidence 3899999999876544
No 142
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=41.07 E-value=31 Score=27.11 Aligned_cols=33 Identities=9% Similarity=-0.217 Sum_probs=18.8
Q ss_pred hccccchhhHHHHhhhhccc-----ChhHHHHhhccccc
Q 021562 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSRD 181 (311)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~-----nP~lae~F~lMaRD 181 (311)
-..=+|+|-..|+.+=+ .- ...+.++|..+-.|
T Consensus 136 D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d 173 (196)
T 3dtp_E 136 DEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPID 173 (196)
T ss_dssp CSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEE
T ss_pred CCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCC
Confidence 44556777777666655 32 23456666666544
No 143
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=41.06 E-value=80 Score=24.38 Aligned_cols=138 Identities=8% Similarity=0.001 Sum_probs=100.4
Q ss_pred ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc------
Q 021562 132 QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF------ 204 (311)
Q Consensus 132 ~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf------ 204 (311)
..+.++..++-|-+-...|++..+.|+-..-.++..+ ..+++.|.-.+-+|..||-=|-+-+.+.|-..+++.
T Consensus 2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~ 81 (149)
T 1n1q_A 2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE 81 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhccchheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhH
Confidence 3467788899999999999999999999988886553 568999999999999999999999999999988874
Q ss_pred --ccccCcccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHH
Q 021562 205 --LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (311)
Q Consensus 205 --Ltk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (311)
++... -.+ .++=++=..+=.|+..=.+|=.+...-+..-++.-..++ +..-.++-.|-.++.+.+
T Consensus 82 s~i~~~~-~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll---~~~l~e~ek~~w~l~~~l 148 (149)
T 1n1q_A 82 ASIKEAT-GGE-SAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADML---DAIEAGLEKHVWMLEAFL 148 (149)
T ss_dssp CCSCCCC-SCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---HHHHHHHHHHHHHHHHhc
Confidence 33322 123 677777666666665555555555555555555554444 445566777777776544
No 144
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=40.59 E-value=78 Score=23.62 Aligned_cols=9 Identities=22% Similarity=0.504 Sum_probs=4.5
Q ss_pred hHHHHhhcc
Q 021562 170 VVAEIFSLM 178 (311)
Q Consensus 170 ~lae~F~lM 178 (311)
.+.++|..+
T Consensus 85 ~~~~~F~~~ 93 (179)
T 2f2o_A 85 EIREAFRVF 93 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 355555544
No 145
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=40.56 E-value=64 Score=24.42 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+..=+
T Consensus 63 ~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~ 125 (193)
T 1bjf_A 63 KFAEHVFRTF--DANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125 (193)
T ss_dssp HHHHHHHHHH--CSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHH
Confidence 3445555544 44555556666676555443222222223333345566668888888877644
No 146
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=40.40 E-value=10 Score=31.35 Aligned_cols=22 Identities=27% Similarity=0.609 Sum_probs=18.9
Q ss_pred cchhhHHHHH-HHhhhCCCCccc
Q 021562 229 IGYWRYITIY-RHLKANPEFQCY 250 (311)
Q Consensus 229 IGYwRYItIy-RHLe~~Pe~rf~ 250 (311)
|-|.||++|+ ..|-+|||++-.
T Consensus 61 ily~R~~~L~~e~IpkHpdy~~~ 83 (146)
T 2xze_A 61 ILYNKYITLFIEKLPKHRDYKSA 83 (146)
T ss_dssp HHHHHHHHHHHTTGGGSTTTTTC
T ss_pred HHHHHHHHHHHHHcccCccchhh
Confidence 5679999999 699999999754
No 147
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=40.25 E-value=24 Score=26.74 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=46.8
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCh
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNP 169 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP 169 (311)
...++|++.+.+.|..| |+...+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|+..-+.. ...
T Consensus 21 ~~~~~~i~~~~~~fd~~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1fpw_A 21 YFDRREIQQWHKGFLRD-CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99 (190)
T ss_dssp CSTHHHHHHHHHHHHHH-CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred CCCHHHHHHHHHHHHHH-CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHH
Confidence 34556777777777666 445566666776655543 10011112333334445566788888887665432 234
Q ss_pred hHHHHhhccccc
Q 021562 170 VVAEIFSLMSRD 181 (311)
Q Consensus 170 ~lae~F~lMaRD 181 (311)
.+.++|..+-+|
T Consensus 100 ~~~~~f~~~D~d 111 (190)
T 1fpw_A 100 KLSWAFELYDLN 111 (190)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHhcCC
Confidence 566677665444
No 148
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=40.18 E-value=28 Score=23.19 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
.++++. +...| |.|..-++--+||...+..+. ...-..-++-+.+.+-..=+|.|-|.|..+-+...
T Consensus 7 ~~~~l~-~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 7 EEEILR-AFKVF--DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp CHHHHH-HHHHH--SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred HHHHHH-HHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 345666 66655 666666777777877766554 22223334445555555667888888877766543
No 149
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=40.16 E-value=29 Score=33.29 Aligned_cols=143 Identities=14% Similarity=0.121 Sum_probs=76.9
Q ss_pred HHhh-cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc--cChhHHHHhhccccchhhhhhhhhhhhcccc-----
Q 021562 126 EAAD-KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK--TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN----- 197 (311)
Q Consensus 126 ~~~d-~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~--~nP~lae~F~lMaRDEARHAGFlNkal~Df~----- 197 (311)
++|. .|+++.|..+.-=|--=..++ |. .-..+.-++.. ..|++.-++...+=.|++|+-.-+.-+.-++
T Consensus 140 ~dw~~~Lt~~Er~~~~~vLa~fa~~D--si-v~~nl~~~l~~~v~~pE~~~~~~~Q~~~EaIHsesYS~il~tl~~d~~e 216 (419)
T 1jk0_A 140 HDWNNRMNENERFFISRVLAFFAASD--GI-VNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKE 216 (419)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTTS--SH-HHHHHCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 5777 999998886654332212222 11 11222223322 4799998888888889999876555554433
Q ss_pred ------cccccccccccCc----------ccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhc
Q 021562 198 ------YALDLGFLTKARK----------YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (311)
Q Consensus 198 ------l~lDLgfLtk~k~----------YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCq 261 (311)
-..+...|.++-+ -++.+ +.|-| ++-|.|=|-=+.++.-.|.++. ..-=+-+-.+-=+.
T Consensus 217 ~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~~~~~-~lva~--~~lEGI~fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~R 291 (419)
T 1jk0_A 217 SEFLFNAIHTIPEIGEKAEWALRWIQDADALFGE-RLVAF--ASIEGVFFSGSFASIFWLKKRG--MMPGLTFSNELICR 291 (419)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSSCCHHH-HHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhccchhHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHcC--CCccHHHHHHHHHH
Confidence 2233444432211 11221 22333 4557776554444333565543 22222233344568
Q ss_pred cccchhhHHHHHHhh
Q 021562 262 DENRHGDFFSALMKA 276 (311)
Q Consensus 262 DEnRHGdfFa~lmra 276 (311)
||.+||+|...+++.
T Consensus 292 DE~lH~~f~~~l~~~ 306 (419)
T 1jk0_A 292 DEGLHTDFACLLFAH 306 (419)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888773
No 150
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=39.88 E-value=53 Score=24.48 Aligned_cols=62 Identities=16% Similarity=0.211 Sum_probs=39.8
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
.+..++++.|++++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++
T Consensus 36 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~ 97 (165)
T 1k94_A 36 PFSLETCRIMIAML--DRDHTGKMGFNAFKELWAAL-NAWKENFMTV-----DQDGSGTVEHHELRQAIG 97 (165)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSBCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCceECHHHHHHHHH
Confidence 34567788888776 44555556667776665543 4455666433 455688888888877664
No 151
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=39.73 E-value=55 Score=24.02 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=48.8
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhHHHHhhccccchhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVAEIFSLMSRDEARHA 186 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~lae~F~lMaRDEARHA 186 (311)
|.|..-.+--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+.. ....+..+|..+-+| +-
T Consensus 37 D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d---~~ 113 (166)
T 2aao_A 37 DADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKD---GS 113 (166)
T ss_dssp CTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTT---CS
T ss_pred CCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCC---CC
Confidence 7777778888888877766533322334566666677777888888887654432 234677888776554 34
Q ss_pred hhhh
Q 021562 187 GFLN 190 (311)
Q Consensus 187 GFlN 190 (311)
|+|+
T Consensus 114 G~i~ 117 (166)
T 2aao_A 114 GYIT 117 (166)
T ss_dssp SSBC
T ss_pred CcCc
Confidence 5544
No 152
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=39.05 E-value=38 Score=24.61 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=45.1
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---------cChh
Q 021562 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---------TNPV 170 (311)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---------~nP~ 170 (311)
+++.+.+-|+ -|.|..-.+--+||...+..+.......-++-+.+.+-..-+|.|-|.|...-+.. ....
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 97 (162)
T 1top_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEE 97 (162)
T ss_dssp HHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHH
Confidence 3444444342 36666777777777776655432222333444555555666777877776655432 2234
Q ss_pred HHHHhhccccc
Q 021562 171 VAEIFSLMSRD 181 (311)
Q Consensus 171 lae~F~lMaRD 181 (311)
+.++|..+-+|
T Consensus 98 ~~~~F~~~D~d 108 (162)
T 1top_A 98 LANCFRIFDKN 108 (162)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 66777766544
No 153
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=39.04 E-value=16 Score=36.13 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=46.0
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC--ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l--~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (311)
......+|++.|+.++- .|..-.+--+||...+..+ .++.+++|-.|= .. +|++-+.||.+=+++.
T Consensus 41 g~~~s~~el~~lf~~~D--~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD-----~~-~G~Is~~EL~~fL~~~qge~ 112 (624)
T 1djx_A 41 NIQVDDGYARKIFRECD--HSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAA-----GS-AETLSVERLVTFLQHQQREE 112 (624)
T ss_dssp -----------------------------CTTHHHHHHTCCHHHHHHHHHHH-----TT-SSSEEHHHHHHHHHHTSCCS
T ss_pred CCCCCHHHHHHHHHHhC--CCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhc-----CC-CCeecHHHHHHHHHHHhCCC
Confidence 44566678999998874 4444567777886655443 567888888773 23 7999999998877532
Q ss_pred ---ChhHHHHhhccccc-hhhhh------hhhhhhhcccccccccc
Q 021562 168 ---NPVVAEIFSLMSRD-EARHA------GFLNKGLSDFNYALDLG 203 (311)
Q Consensus 168 ---nP~lae~F~lMaRD-EARHA------GFlNkal~Df~l~lDLg 203 (311)
...+.+++.-.-.| ++++. ||++--+++.|-.+|-.
T Consensus 113 ~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~~~~~~p~ 158 (624)
T 1djx_A 113 EAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLA 158 (624)
T ss_dssp SCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTTTBSBCGG
T ss_pred CCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCccccccCcc
Confidence 12456666665555 23333 35555556555555543
No 154
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=38.68 E-value=17 Score=27.57 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIF 175 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F 175 (311)
.++++.++..+ |.|..-.+--+||...+..........-+..+-+.+-..-+|.|-..|+.+-++. ....+.++|
T Consensus 86 ~~~~~~~~~~~--D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 163 (191)
T 3khe_A 86 EAEVDHILQSV--DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVL 163 (191)
T ss_dssp HHHHHHHHHHT--CTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHH
Confidence 34444444444 5666666777788666543322222222333334556778999999999987752 123455566
Q ss_pred hccccc
Q 021562 176 SLMSRD 181 (311)
Q Consensus 176 ~lMaRD 181 (311)
..+..|
T Consensus 164 ~~~D~~ 169 (191)
T 3khe_A 164 QECDKN 169 (191)
T ss_dssp HHHCTT
T ss_pred HHhCCC
Confidence 555443
No 155
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=38.65 E-value=44 Score=24.37 Aligned_cols=76 Identities=9% Similarity=0.189 Sum_probs=44.7
Q ss_pred ccCC-cccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---------ChhHHHHhhccccc
Q 021562 112 DYNQ-THFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---------NPVVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr-~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---------nP~lae~F~lMaRD 181 (311)
|.|. .-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 28 D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 107 (161)
T 1dtl_A 28 VLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107 (161)
T ss_dssp TTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTT
T ss_pred cCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCC
Confidence 5666 6667677777666554322222334555566666778888888876544321 23477788776554
Q ss_pred hhhhhhhhh
Q 021562 182 EARHAGFLN 190 (311)
Q Consensus 182 EARHAGFlN 190 (311)
+-|+|+
T Consensus 108 ---~~G~i~ 113 (161)
T 1dtl_A 108 ---ADGYID 113 (161)
T ss_dssp ---CSSEEE
T ss_pred ---CCCcCc
Confidence 345554
No 156
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=38.45 E-value=26 Score=25.12 Aligned_cols=39 Identities=10% Similarity=0.232 Sum_probs=19.1
Q ss_pred HHhhhhccccchhhHHHHhhhhcc------cChhHHHHhhccccc
Q 021562 143 LERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRD 181 (311)
Q Consensus 143 LerScTaEFSGflLyKEl~rrlk~------~nP~lae~F~lMaRD 181 (311)
|.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+|
T Consensus 47 l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d 91 (142)
T 2bl0_C 47 MFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPE 91 (142)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCS
T ss_pred HHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCC
Confidence 334444445566666655443321 123456666655444
No 157
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=38.26 E-value=41 Score=27.35 Aligned_cols=63 Identities=17% Similarity=0.327 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhc-CChhHHHHHHHHHHhhhhccccchhhHHHHhh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELGR 162 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~~~r~~FidFLerScTaEFSGflLyKEl~r 162 (311)
++|++.+...|+. .|+.-.+--++|...+.. .+......+++-+-+.+-..=+|.+-|.|...
T Consensus 63 ~~ei~~l~~~F~~-~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~ 126 (229)
T 3dd4_A 63 KKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIK 126 (229)
T ss_dssp HHHHHHHHHHHHT-TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHH
Confidence 3455555555533 233344555555554443 22233334444444444444455555555443
No 158
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=38.12 E-value=43 Score=26.50 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhHH
Q 021562 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVA 172 (311)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~la 172 (311)
.+|.+.+.+-|+. |.|+.-.+--+||...+..+....-...++-|.+.+-..-+|.|-|.|...-+.. ....+.
T Consensus 53 ~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~ 132 (197)
T 3pm8_A 53 DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCL 132 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHH
Confidence 3444445444433 6777777777788776665544444445566666666667888888887554321 123567
Q ss_pred HHhhccccchhhhhhhhh
Q 021562 173 EIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 173 e~F~lMaRDEARHAGFlN 190 (311)
.+|..+-.| +-|+|+
T Consensus 133 ~~F~~~D~d---~~G~Is 147 (197)
T 3pm8_A 133 IPFKFFDID---GNGKIS 147 (197)
T ss_dssp HHHHHHCTT---CSSEEC
T ss_pred HHHHHHCCC---CCCCCC
Confidence 777766554 345554
No 159
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=37.86 E-value=68 Score=22.36 Aligned_cols=75 Identities=19% Similarity=0.224 Sum_probs=37.5
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------
Q 021562 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------ 167 (311)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------ 167 (311)
+.++|++.|++++- ....+-=+||...+.. -..+.++.|-.| -..=+|.|-..|+.+-++.-
T Consensus 6 ~~~~e~~~l~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 6 LKDADVAAALAACS----AADSFKHKEFFAKVGLASKSLDDVKKAFYVI-----DQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp SCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CCHHHHHHHHHHhC----CCCcCcHHHHHHHHhCChhHHHHHHHHHHHH-----CCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 44566666666653 1222444456544321 122344444433 44557777777777665432
Q ss_pred --ChhHHHHhhcccc
Q 021562 168 --NPVVAEIFSLMSR 180 (311)
Q Consensus 168 --nP~lae~F~lMaR 180 (311)
...+.++|..+-.
T Consensus 77 ~~~~~~~~~~~~~D~ 91 (108)
T 2pvb_A 77 LTDAETKAFLADGDK 91 (108)
T ss_dssp CCHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHhCC
Confidence 2345555555443
No 160
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=37.85 E-value=24 Score=27.73 Aligned_cols=80 Identities=19% Similarity=0.326 Sum_probs=46.3
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-----hhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc--
Q 021562 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-- 167 (311)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-- 167 (311)
..+..++++.++..+ |.|..-.+--+||...+..+. .+.+..|-.| -..=+|+|-..|+.+=++.-
T Consensus 41 ~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~-----D~d~dG~Is~~El~~~l~~~g~ 113 (188)
T 1s6i_A 41 SELMESEIKDLMDAA--DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYF-----DKDGSGYITLDEIQQACKDFGL 113 (188)
T ss_dssp CCCCHHHHHHHHHHT--CTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHT-----TTTCSSEEEHHHHHHTTTTTTC
T ss_pred CCCCHHHHHHHHHHc--CCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHcCC
Confidence 344556777777765 444444455567766554442 3455555433 45668888888888766432
Q ss_pred -ChhHHHHhhccccc
Q 021562 168 -NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 -nP~lae~F~lMaRD 181 (311)
...+.++|..+-.|
T Consensus 114 ~~~~~~~~~~~~D~d 128 (188)
T 1s6i_A 114 DDIHIDDMIKEIDQD 128 (188)
T ss_dssp CTTHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHCCC
Confidence 23456666555433
No 161
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=37.77 E-value=31 Score=26.16 Aligned_cols=16 Identities=13% Similarity=0.218 Sum_probs=7.8
Q ss_pred hccccchhhHHHHhhh
Q 021562 148 TAEFSGFLLYKELGRR 163 (311)
Q Consensus 148 TaEFSGflLyKEl~rr 163 (311)
-..=+|.|-+.|+.+=
T Consensus 109 D~d~~G~i~~~e~~~~ 124 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDI 124 (190)
T ss_dssp CTTCSSEEEHHHHHHH
T ss_pred cCCCCCeECHHHHHHH
Confidence 3344555555555443
No 162
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=37.58 E-value=76 Score=23.73 Aligned_cols=63 Identities=24% Similarity=0.305 Sum_probs=41.2
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
.+..++++.++.++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 38 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~ 100 (167)
T 1gjy_A 38 PFNLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFISF-----DSDRSGTVDPQELQKALTT 100 (167)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSEECHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCcCCHHHHHHHHHH
Confidence 34567788888776 44555556667777665543 4556666433 5566888888888876643
No 163
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=37.37 E-value=24 Score=32.88 Aligned_cols=59 Identities=22% Similarity=0.197 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 021562 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (311)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (311)
.+.++-++.-.|.+|=+-=-+-+++.+- ..-.|.+.++...=.+|||||.+|--..++.
T Consensus 182 ~~~~l~~~a~~lvaEeiid~~~r~~~~D-~~vQP~vR~v~riHv~DEaRH~~fare~~~~ 240 (336)
T 3chh_A 182 WERDIAVLVWGAVAETCINALLALLARD-ATIQPMHSLITTLHLRDETAHGSIVVEVVRE 240 (336)
T ss_dssp HHHHHHHHHHHHHHHHSBCHHHHHHHTC-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555566666555555555553 2247999999999999999999998775544
No 164
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=37.09 E-value=50 Score=23.88 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHh
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLER 145 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLer 145 (311)
.+++|+++++.|..-+. ..|+++.++..++||..
T Consensus 46 ~~~~W~~~v~~M~~~~g--------------~~ls~~e~~~I~~YL~~ 79 (81)
T 2blf_B 46 GQAFWDAEVQKMIKVYH--------------APVDEADAKAIADYLAK 79 (81)
T ss_dssp CHHHHHHHHHHHHHTSC--------------CCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcC--------------CCCCHHHHHHHHHHHHH
Confidence 46799999999975433 36889999999999964
No 165
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=37.08 E-value=68 Score=22.81 Aligned_cols=69 Identities=7% Similarity=0.042 Sum_probs=37.0
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhh---hccccchhhHHHHhhhhccc--------ChhHHHHhhcccc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC---TAEFSGFLLYKELGRRLKKT--------NPVVAEIFSLMSR 180 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerSc---TaEFSGflLyKEl~rrlk~~--------nP~lae~F~lMaR 180 (311)
|.|+.-.+--++|...+..+....-..-++-|.+.+ -..- |.|-|.|...-+... ...+.++|..+-+
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 96 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDK 96 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCC
Confidence 566666666677766555432211122233344444 3333 788888776555332 2456777877655
Q ss_pred c
Q 021562 181 D 181 (311)
Q Consensus 181 D 181 (311)
|
T Consensus 97 d 97 (149)
T 2mys_C 97 E 97 (149)
T ss_pred C
Confidence 4
No 166
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=37.07 E-value=50 Score=29.60 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=68.0
Q ss_pred ccHHH---HHHHHHHHhhccCCcccccChhH-HHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHH
Q 021562 97 LNQAE---FEALLQEFKTDYNQTHFVRNKEF-KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (311)
Q Consensus 97 ~~r~E---~~Aml~Efr~DyNr~HFvR~~eF-~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~la 172 (311)
..+|| |+.+++-|++-.-.--=.+.+.+ ++...++....-..++|=|.=+-.=|--+|==|+-|+-.+. .+ |+
T Consensus 66 LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~vr~~ep~~l~D~Llv~AlIEARSCERF~lLa~~l~--d~-L~ 142 (206)
T 2itb_A 66 LAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHLD--EE-LG 142 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTTSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHGGGSC--HH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhHHHHHHHHhcCc--HH-HH
Confidence 35566 45677777765444434455566 44555665555577899887666667777778888999884 34 99
Q ss_pred HHhhccccchhhhhh-hhhhhhcccc
Q 021562 173 EIFSLMSRDEARHAG-FLNKGLSDFN 197 (311)
Q Consensus 173 e~F~lMaRDEARHAG-FlNkal~Df~ 197 (311)
+.+.-+-+.||||-| ||.-|-.-++
T Consensus 143 ~FY~~Ll~SEArHy~~yl~LA~~y~~ 168 (206)
T 2itb_A 143 RFYHGLLKSEARHYQGYLKLAHNYGD 168 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 999999999999975 6665554443
No 167
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=37.07 E-value=24 Score=29.79 Aligned_cols=132 Identities=19% Similarity=0.111 Sum_probs=85.8
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (311)
.-++-|......|+..--+|--+++..++. -|.++.+|.-.|.+|..||.-+=+.|. |-.+.++-.. ..-.+=.+
T Consensus 8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~~~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~--p~~~~~s~ 83 (191)
T 1lko_A 8 RTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF--PAGIIADT 83 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC--CCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC--CccccCCH
Confidence 366788888899999999999888887655 699999999999999999977766665 3333333211 11111123
Q ss_pred hhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhh
Q 021562 217 KFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (311)
Q Consensus 217 kfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (311)
.=.+=+.+=-|..-+ -+|=.+...-+ +-.++.+.++|+.--.+|-+|.+-|..++..
T Consensus 84 ~e~l~~al~~E~~e~t~~y~~~~~~A~---eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~ 141 (191)
T 1lko_A 84 HANLIASAAGEHHEYTEMYPSFARIAR---EEGYEEIARVFASIAVAEEFHEKRFLDFARN 141 (191)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333434443442111 11222222222 3346677888888889999999999988753
No 168
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=36.93 E-value=65 Score=22.50 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=45.8
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC---ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 021562 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (311)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (311)
..+..+|++.|++++- ..-.+-=+||...+... ..+.++.|--| -..=+|.|-..|+.+=++.-
T Consensus 5 ~~~~~~ei~~~~~~~D----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~i~~~el~~~l~~~~~~~ 75 (109)
T 3fs7_A 5 DILSAKDIESALSSCQ----AADSFNYKSFFSTVGLSSKTPDQIKKVFGIL-----DQDKSGFIEEEELQLFLKNFSSSA 75 (109)
T ss_dssp GTSCHHHHHHHHHHTC----STTCCCHHHHHHHHTCTTCCHHHHHHHHHHH-----STTCSSSBCHHHHHTTGGGTCTTS
T ss_pred CcCCHHHHHHHHHhcC----CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHH-----CCCCCCeEeHHHHHHHHHHHhccc
Confidence 3456678888888773 22234445676655421 23344555433 55667888888887766533
Q ss_pred ----ChhHHHHhhccccc
Q 021562 168 ----NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 ----nP~lae~F~lMaRD 181 (311)
...+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~D~~ 93 (109)
T 3fs7_A 76 RVLTSAETKAFLAAGDTD 93 (109)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred ccCCHHHHHHHHHHhCCC
Confidence 23566777666544
No 169
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=36.16 E-value=23 Score=27.53 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=9.0
Q ss_pred hccccchhhHHHHhhhh
Q 021562 148 TAEFSGFLLYKELGRRL 164 (311)
Q Consensus 148 TaEFSGflLyKEl~rrl 164 (311)
-..=+|.|-+.|+.+-+
T Consensus 117 D~d~~G~I~~~E~~~~l 133 (207)
T 2d8n_A 117 DVDGNGTISKNEVLEIV 133 (207)
T ss_dssp CTTCSSEECHHHHHHHH
T ss_pred cCCCCCeEcHHHHHHHH
Confidence 33445666666655544
No 170
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=36.15 E-value=56 Score=26.21 Aligned_cols=87 Identities=23% Similarity=0.353 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhh-ccC--CcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hh
Q 021562 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (311)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~ 170 (311)
+|++.+.+-|.. |.| +.-.+--+||...+.. ++......++-+.+.+-..=+|.|-|.|...-+.... ..
T Consensus 45 ~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 123 (226)
T 2zfd_A 45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDK 123 (226)
T ss_dssp HHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHH
Confidence 344444443432 444 7777777788766543 2111122333344444556688888888776554322 24
Q ss_pred HHHHhhccccchhhhhhhhh
Q 021562 171 VAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (311)
+.++|..+-+| +-|+|+
T Consensus 124 l~~~F~~~D~d---~~G~Is 140 (226)
T 2zfd_A 124 IHFSFQLYDLK---QQGFIE 140 (226)
T ss_dssp HHHHHHHHCTT---SSSSEE
T ss_pred HHHHHHHhCCC---CCCccc
Confidence 78888877665 345554
No 171
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=36.04 E-value=86 Score=21.82 Aligned_cols=62 Identities=24% Similarity=0.289 Sum_probs=29.9
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (311)
.+..+|++.|++++- ..-.+--+||...+.. -..+.++.|-. +-..=+|.|-..|+.+-++.
T Consensus 5 ~~t~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~-----~D~d~~G~I~~~el~~~l~~ 69 (108)
T 1rro_A 5 ILSAEDIAAALQECQ----DPDTFEPQKFFQTSGLSKMSASQVKDIFRF-----IDNDQSGYLDGDELKYFLQK 69 (108)
T ss_dssp TSCHHHHHHHHHHTC----STTCCCHHHHHHHHSGGGSCHHHHHHHHHH-----HCTTCSSEECTHHHHTGGGG
T ss_pred cCCHHHHHHHHHHcc----CCCCcCHHHHHHHHhcCcccHHHHHHHHHH-----hCCCCCCcCCHHHHHHHHHH
Confidence 344556666666652 1223444455444321 11223344432 34455677777776665543
No 172
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=35.36 E-value=45 Score=24.24 Aligned_cols=86 Identities=16% Similarity=0.221 Sum_probs=48.6
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hhH---HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPL---RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN- 168 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~---r~~FidFLerScTaEFSGflLyKEl~rrlk~~n- 168 (311)
...+..++++.++..+ |.|..-.+.-+||...+.... ... ...-+.-+-+.+-..=+|.|-..|+.+-++...
T Consensus 50 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~ 127 (162)
T 1top_A 50 GQNPTKEELDAIIEEV--DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127 (162)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 4455666777777777 445555666677755443321 111 122222233344566688888888877665432
Q ss_pred ----hhHHHHhhccccc
Q 021562 169 ----PVVAEIFSLMSRD 181 (311)
Q Consensus 169 ----P~lae~F~lMaRD 181 (311)
..+.++|..+-.|
T Consensus 128 ~~~~~~~~~~~~~~d~~ 144 (162)
T 1top_A 128 HVTEEDIEDLMKDSDKN 144 (162)
T ss_dssp CCCHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHhCCC
Confidence 4567777776554
No 173
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=35.09 E-value=50 Score=27.86 Aligned_cols=135 Identities=14% Similarity=0.192 Sum_probs=105.9
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
+..++-|-+=...|+.-.-.|--+++-.++. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 9 ~~v~~~LN~qi~~El~As~~Yl~~a~~f~~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p-~~~~~s 87 (189)
T 3uno_A 9 TKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV-RNQFDR 87 (189)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCC-CccchH
Confidence 4577888888888988888888887766544 58899999999999999999988999999999999888765 344556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHh
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (311)
+.=++=+..--||.---.|--++..-+++-|+... ++++..-.+|-.|-+-+.-++.
T Consensus 88 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~---~fLe~fL~EQve~~~~l~~~l~ 144 (189)
T 3uno_A 88 PREALALALDQERTVTDQVGRLTAVARDEGDFLGE---QFMQWFLQEQIEEVALMATLVR 144 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888999888899999988887776554 4555334667788777766554
No 174
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=34.02 E-value=46 Score=24.50 Aligned_cols=64 Identities=14% Similarity=0.306 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhh--hccccchhhHHHHhhhhc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC--TAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerSc--TaEFSGflLyKEl~rrlk 165 (311)
+++..+...+ |.|..-++--+||...+..+....-..=++-+.+.| -..=+|.|-|.|..+-+.
T Consensus 85 ~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 150 (159)
T 2ovk_C 85 DEFMEAFKTF--DREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHT--CTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHh
Confidence 3444444333 555555555556655554432222222233333322 333456666666665553
No 175
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=34.01 E-value=14 Score=28.77 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=24.1
Q ss_pred ccchhhHH-HHhhhhcccChhHH-------HHhhccccch
Q 021562 151 FSGFLLYK-ELGRRLKKTNPVVA-------EIFSLMSRDE 182 (311)
Q Consensus 151 FSGflLyK-El~rrlk~~nP~la-------e~F~lMaRDE 182 (311)
-|+|+||- |-..+|+..||.+. +....|+-+|
T Consensus 27 ~sAf~lf~~e~R~kik~enP~~s~~~~eIse~Wk~ls~ee 66 (90)
T 2yuk_A 27 TVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQE 66 (90)
T ss_dssp SSSHHHHHHHHCTTHHHHCCSHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHhHHHHHHHCcCccchHHHHHHHHHcCCHHH
Confidence 47888887 66678888899977 6677776555
No 176
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=33.56 E-value=24 Score=25.61 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=44.3
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhcc--ccchhhHHHHhhhhccc--------ChhHHHHhhccccc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAE--FSGFLLYKELGRRLKKT--------NPVVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaE--FSGflLyKEl~rrlk~~--------nP~lae~F~lMaRD 181 (311)
|.|+.-.+--+||...+..+....-..-++-|.+.+-.. -+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 20 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 99 (151)
T 1w7j_B 20 DRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKE 99 (151)
T ss_dssp CCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTT
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCC
Confidence 666667777777876665542222233345555555555 67888887776544321 24567788877654
Q ss_pred hhhhhhhhh
Q 021562 182 EARHAGFLN 190 (311)
Q Consensus 182 EARHAGFlN 190 (311)
+-|+|+
T Consensus 100 ---~~G~I~ 105 (151)
T 1w7j_B 100 ---GNGKVM 105 (151)
T ss_dssp ---SSSEEE
T ss_pred ---CCCcCc
Confidence 455554
No 177
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=33.45 E-value=38 Score=25.26 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=41.2
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc----ccC--hhHHHHhhccccc
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----KTN--PVVAEIFSLMSRD 181 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk----~~n--P~lae~F~lMaRD 181 (311)
|.|..-.+--+||...+..+.......-+.-+.+.+...-+|.+-|.|....+. ... ..|.++|..+-+|
T Consensus 20 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d 95 (148)
T 2lmt_A 20 DKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRD 95 (148)
T ss_dssp HCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSS
T ss_pred cCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCC
Confidence 667777777778876655443222233344555566677788888877654332 222 2377788765444
No 178
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=32.92 E-value=34 Score=21.55 Aligned_cols=24 Identities=13% Similarity=-0.028 Sum_probs=13.6
Q ss_pred HHHHhhhhccccchhhHHHHhhhh
Q 021562 141 EFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 141 dFLerScTaEFSGflLyKEl~rrl 164 (311)
+-+.+.+-..=+|.|-|.|..+-+
T Consensus 40 ~~~~~~~D~~~dg~i~~~ef~~~~ 63 (67)
T 1tiz_A 40 VKFFEEIDVDGNGELNADEFTSCI 63 (67)
T ss_dssp HHHHHHHCCSSSSEECHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHH
Confidence 334444445556777777765544
No 179
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=32.53 E-value=51 Score=27.35 Aligned_cols=140 Identities=16% Similarity=0.246 Sum_probs=104.1
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc-----ccccC
Q 021562 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF-----LTKAR 209 (311)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf-----Ltk~k 209 (311)
++.-++-|-.-...|++..+.|+-....++..+ ..+.+.|.-.+-+|..||--|-.-+.+.|-..+.+. ++.-+
T Consensus 23 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~I~ 102 (188)
T 2clb_A 23 IKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS 102 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhccCC
Confidence 566789999999999999999999999885542 569999999999999999999999999999988654 33322
Q ss_pred -c---ccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHHhhCcc
Q 021562 210 -K---YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQ 279 (311)
Q Consensus 210 -~---YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~ 279 (311)
. -.+..++=++=+.+=.|+.-=.+|=.+...-+.. |+.-..++ +....++-.|-+.|..++...|.
T Consensus 103 ~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL---~~~l~e~ee~~~~l~~~L~~~~~ 172 (188)
T 2clb_A 103 DAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLA---QRILQEEIEHEAWFLELLYGRPS 172 (188)
T ss_dssp CCCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH---HHHHHHHHHHHHHHHHHHSCCCC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHH---HHHHHHHHHHHHHHHHHhccCCC
Confidence 2 2245677677666666665555555555555566 65555554 44556677799999999987654
No 180
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=32.52 E-value=79 Score=24.49 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=51.3
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhHH
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVA 172 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~la 172 (311)
..+|++.+...|-.|. +.-.+--+||...+..+........++-+-+.+-..=+|.|-+.|+..-+.. ....+.
T Consensus 20 ~~~el~~~f~~~D~~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 20 DAAQLQEWYKKFLEEC-PSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHSSS-TTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CHHHHHHHHHHHHhhC-CCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 4567777777764331 4556667788877776654444445555555666677888888887665432 233567
Q ss_pred HHhhccccc
Q 021562 173 EIFSLMSRD 181 (311)
Q Consensus 173 e~F~lMaRD 181 (311)
++|..+-+|
T Consensus 99 ~~F~~~D~d 107 (204)
T 1jba_A 99 WTFKIYDKD 107 (204)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHhCCC
Confidence 777765544
No 181
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=32.37 E-value=43 Score=23.96 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=44.5
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (311)
...+..++++.++..+ |.|..-.+--+||...+.. +.......-+..+-+.+-..-+|.|-..|+.+=++..
T Consensus 36 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~ 113 (142)
T 2bl0_C 36 GVRVEPAAFNEMFNEA--DATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLK 113 (142)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCC
T ss_pred CCCCCHHHHHHHHHHh--CcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC
Confidence 3444556677777665 3344444555666544432 1111111122222334456678888888887766533
Q ss_pred ChhHHHHhhccc
Q 021562 168 NPVVAEIFSLMS 179 (311)
Q Consensus 168 nP~lae~F~lMa 179 (311)
...+.++|..+-
T Consensus 114 ~~~~~~~~~~~d 125 (142)
T 2bl0_C 114 PHEFAEFLGITE 125 (142)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 335677777664
No 182
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=31.61 E-value=53 Score=23.30 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
.++++..+...| |.|..-++--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+
T Consensus 27 ~~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 27 SEEEIREAFRVE--DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91 (94)
T ss_dssp CHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHH--CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 344555555444 45555555555665544432111111112223333344557777777766544
No 183
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=30.86 E-value=1.4e+02 Score=23.14 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=39.0
Q ss_pred cccHHHHHHHH-------HHHhhccCCcccccChhHHHHhh---------cC--ChhHHHHHHHHHHhhhhccccchhhH
Q 021562 96 KLNQAEFEALL-------QEFKTDYNQTHFVRNKEFKEAAD---------KM--QGPLRQIFVEFLERSCTAEFSGFLLY 157 (311)
Q Consensus 96 ~~~r~E~~Aml-------~Efr~DyNr~HFvR~~eF~~~~d---------~l--~~~~r~~FidFLerScTaEFSGflLy 157 (311)
.+..++++.++ +.+ |.|..-.+--+||...+. .+ +++..+..+.-+-+.+-..=+|+|-.
T Consensus 70 ~~~~~~~~~l~~~~~~lf~~~--D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~ 147 (208)
T 2hpk_A 70 NATDEQVEKMRDAVRVFFLHK--GVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147 (208)
T ss_dssp CCCHHHHHHHHHHHHHHHHHT--TCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCH
T ss_pred CCCHHHHHHHHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 34455666666 333 555555666777866543 22 33333333343444556667888888
Q ss_pred HHHhhhhc
Q 021562 158 KELGRRLK 165 (311)
Q Consensus 158 KEl~rrlk 165 (311)
.|+.+=++
T Consensus 148 ~El~~~l~ 155 (208)
T 2hpk_A 148 DELKTMMK 155 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877664
No 184
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=30.84 E-value=63 Score=25.48 Aligned_cols=15 Identities=20% Similarity=0.171 Sum_probs=6.9
Q ss_pred ccccchhhHHHHhhh
Q 021562 149 AEFSGFLLYKELGRR 163 (311)
Q Consensus 149 aEFSGflLyKEl~rr 163 (311)
..=+|++-..||.+=
T Consensus 95 ~d~~G~I~~~el~~~ 109 (176)
T 2lhi_A 95 KNGDGLISAAELKHV 109 (176)
T ss_dssp SSCSSSBCHHHHHHH
T ss_pred CCCCCcCcHHHHHHH
Confidence 344455555544443
No 185
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=30.76 E-value=42 Score=24.19 Aligned_cols=64 Identities=8% Similarity=0.050 Sum_probs=30.8
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-----------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----------~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
.+..++++.++.++. |.|..-.+--+||...+... ....+..|- ..-..=+|.|-..|+.+=+
T Consensus 36 ~~~~~~~~~l~~~~~-D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~I~~~el~~~l 109 (148)
T 1m45_A 36 NPTNQLVQDIINADS-SLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ-----VFDKESTGKVSVGDLRYML 109 (148)
T ss_dssp CCCHHHHHHHHHC---CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHH-----TTCSSSSSEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHhh-CCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHH-----HhCCCCCCcCCHHHHHHHH
Confidence 444455666655542 33433344445554443332 133344443 2344557888888777665
Q ss_pred c
Q 021562 165 K 165 (311)
Q Consensus 165 k 165 (311)
+
T Consensus 110 ~ 110 (148)
T 1m45_A 110 T 110 (148)
T ss_dssp H
T ss_pred H
Confidence 4
No 186
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=30.54 E-value=56 Score=25.01 Aligned_cols=45 Identities=7% Similarity=0.130 Sum_probs=26.3
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHH
Q 021562 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVE 141 (311)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~Fid 141 (311)
.....+|+++|+.++ |.|..-.+-=+||...+....++.++.|--
T Consensus 81 ~~~~~~e~~~l~~~~--D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~ 125 (150)
T 2jjz_A 81 VPKTHLEMKKMISEV--TGGVSDTISYRDFVNMMLGKRSAVLKLVMM 125 (150)
T ss_dssp CCCCHHHHHHHHHHH--HTTSCSSBCHHHHHHHHHSSSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHH--CCCCCCcEeHHHHHHHHHHhHHHHHHHHHH
Confidence 344556677777765 344444555567766666555566666643
No 187
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=30.43 E-value=50 Score=24.14 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=47.6
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
...+..++++.|++++-. |..-.+-=+||...+... ..+.++.|- .+-..=+|+|-..|+.+=++..
T Consensus 40 g~~~~~~~~~~l~~~~d~--~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 40 GQNPTEAELQDMINEVDA--DGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK-----VFDRDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHCT--TCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSTTCSSCBCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHCC--CCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHH-----HhCCCCCCcCCHHHHHHHHHHh
Confidence 445566778888877643 444455556775544321 123445553 3355668888888887765432
Q ss_pred -----ChhHHHHhhccccc
Q 021562 168 -----NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 -----nP~lae~F~lMaRD 181 (311)
...+.++|.-+-.|
T Consensus 113 g~~~~~~~~~~~~~~~d~d 131 (148)
T 1exr_A 113 GEKLTDDEVDEMIREADID 131 (148)
T ss_dssp TCCCCHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHhCCC
Confidence 34567777766544
No 188
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=30.36 E-value=20 Score=28.51 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
++++.++..+ |.|..-.+-=+||...+..+.......-+..+-+.+-..=+|+|-..|+.+=++..
T Consensus 93 ~~~~~l~~~~--D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 93 PDIHQVLRDI--DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHHHHHHHC---------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 3444444444 33333344445665444332221122223333344566789999999998877643
No 189
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=30.25 E-value=97 Score=30.33 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=39.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
.+++..+|++.|++++ |.|..-.+-=+||...+... ..+.+++|--| -..=+|+|-..||.+=++
T Consensus 332 G~~~TeeEI~~Lf~~~--D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f-----DkDgdG~IS~eELr~vL~ 402 (440)
T 3u0k_A 332 GQNPTEAELQDMINEV--DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF-----DKDGNGYISAAELRHVMT 402 (440)
T ss_dssp TCCCCHHHHHHHHHHH--CSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH-----CTTCSSEECHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH-----CCCCcCcCCHHHHHHHHH
Confidence 4556667777777776 44444455556775544321 34456666543 456678888888876553
No 190
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=29.93 E-value=48 Score=23.67 Aligned_cols=63 Identities=14% Similarity=0.154 Sum_probs=36.1
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHH
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEI 174 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~ 174 (311)
|.|..-++--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+... ++.++.+
T Consensus 42 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~~~~l~~i 105 (107)
T 2d58_A 42 DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMI 105 (107)
T ss_dssp CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSSCCHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcccHHHHHH
Confidence 66666677777777666554222112223334444555567888888877666443 5555543
No 191
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=29.77 E-value=63 Score=24.70 Aligned_cols=76 Identities=25% Similarity=0.278 Sum_probs=46.7
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-----hhHHHHhhccccchhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----PVVAEIFSLMSRDEARHA 186 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-----P~lae~F~lMaRDEARHA 186 (311)
|.|+.-.+--+||...+..+.......-++-+.+.+-..=+|.|-|.|...-+.... ..+.++|..+-+| +-
T Consensus 47 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d---~~ 123 (204)
T 3e3r_A 47 DRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRS---GD 123 (204)
T ss_dssp CTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTT---CS
T ss_pred ccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcC---CC
Confidence 566666677777776666553333333455555556666788999998877665332 2577778776554 34
Q ss_pred hhhh
Q 021562 187 GFLN 190 (311)
Q Consensus 187 GFlN 190 (311)
|+|+
T Consensus 124 G~I~ 127 (204)
T 3e3r_A 124 GVVT 127 (204)
T ss_dssp SEEC
T ss_pred CeEe
Confidence 5554
No 192
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=29.67 E-value=66 Score=22.37 Aligned_cols=18 Identities=44% Similarity=0.582 Sum_probs=9.9
Q ss_pred hccccchhhHHHHhhhhc
Q 021562 148 TAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 148 TaEFSGflLyKEl~rrlk 165 (311)
-..=+|.|-..|+.+-++
T Consensus 51 D~d~~G~I~~~el~~~l~ 68 (109)
T 1rwy_A 51 DKDKSGFIEEDELGSILK 68 (109)
T ss_dssp STTCSSEECHHHHHTHHH
T ss_pred CCCCCCeEcHHHHHHHHH
Confidence 444566666666655443
No 193
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=29.66 E-value=51 Score=28.15 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhh
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERS 146 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerS 146 (311)
.+++++++.+.++.-|.+ -...+..++..++++.+.-+.|++|+++|
T Consensus 207 ~~~~~~~l~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 253 (266)
T 3r0s_A 207 DKDEVDRLSRAFKTLFRQ--GDLKENAKNLLENQESENVKKMCHFILET 253 (266)
T ss_dssp CHHHHHHHHHHHHHHHSS--SCHHHHHHHHHTTCCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHcc--CcHHHHHHHHHhhcCCHHHHHHHHHHHhc
Confidence 356777777777776654 22222333333333445677899999866
No 194
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=29.52 E-value=70 Score=24.53 Aligned_cols=75 Identities=15% Similarity=0.229 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCCh----hHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHH
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG----PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~----~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~la 172 (311)
++++.++..+ |.|..-.+-=+||...+..+.. +.++.|- .+-..=+|+|-..|+.+-++.. ..++.
T Consensus 73 ~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 145 (180)
T 3mse_B 73 WDINRILQAL--DINDRGNITYTEFMAGCYRWKNIESTFLKAAFN-----KIDKDEDGYISKSDIVSLVHDKVLDNNDID 145 (180)
T ss_dssp HHHHHHHHHH--CTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH-----HHCTTCSSCBCHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH-----HHCCCCCCCCCHHHHHHHHcCCCCCHHHHH
Confidence 4566666655 4444455666677665554422 3444443 3355667888888887766522 23455
Q ss_pred HHhhccccc
Q 021562 173 EIFSLMSRD 181 (311)
Q Consensus 173 e~F~lMaRD 181 (311)
++|..+-.|
T Consensus 146 ~~~~~~d~~ 154 (180)
T 3mse_B 146 NFFLSVHSI 154 (180)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhhhc
Confidence 666655544
No 195
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=29.26 E-value=1.1e+02 Score=22.61 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=21.5
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhcc
Q 021562 140 VEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLM 178 (311)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lM 178 (311)
+.-+-+.+-..=+|.|-+.|+.+=++.. ...+.++|..+
T Consensus 107 ~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~ 148 (185)
T 2sas_A 107 IPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVI 148 (185)
T ss_dssp HHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 3333444555667888888877766432 23444444443
No 196
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=28.95 E-value=70 Score=22.32 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=42.8
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----
Q 021562 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK----- 166 (311)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~----- 166 (311)
.++..+|+++|++++- ..-.+-=+||...+.. -..+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 5 ~~~~~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g 75 (109)
T 1bu3_A 5 GILADADVAAALKACE----AADSFNYKAFFAKVGLTAKSADDIKKAFFVI-----DQDKSGFIEEDELKLFLQVFSAGA 75 (109)
T ss_dssp CSSCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSEEHHHHHTHHHHHSTTC
T ss_pred ccCCHHHHHHHHHHhC----CCCcCcHHHHHHHHHcChhhHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHHcccC
Confidence 3455677778777753 2223444566554432 122344555433 4566788888777765542
Q ss_pred ---cChhHHHHhhccccc
Q 021562 167 ---TNPVVAEIFSLMSRD 181 (311)
Q Consensus 167 ---~nP~lae~F~lMaRD 181 (311)
....+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~D~~ 93 (109)
T 1bu3_A 76 RALTDAETKAFLKAGDSD 93 (109)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHhCCC
Confidence 234566666655443
No 197
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=28.61 E-value=1.1e+02 Score=23.17 Aligned_cols=130 Identities=9% Similarity=-0.006 Sum_probs=88.6
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhccccccccccc--------ccccCc
Q 021562 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--------LTKARK 210 (311)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--------Ltk~k~ 210 (311)
++-|-.-...|++.++-++-..=.++.. -+.+++.|.-.+.+|..||-=|-+-+.+.|-..+++. +.....
T Consensus 3 ~~~Ln~~la~e~~~~~~~~~~hw~v~g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~ 82 (142)
T 1ji5_A 3 IEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAY 82 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCC
Confidence 4556666777887777777655545544 3778999999999999999999999999999988865 554333
Q ss_pred ccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHH
Q 021562 211 YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (311)
Q Consensus 211 YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (311)
- + .++=++=...=.|+..=.+|=.+...-+..-|..-.. +++...++|-.|-.++.+.+
T Consensus 83 ~-~-~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~~---~l~~~l~e~ek~~w~l~~~l 141 (142)
T 1ji5_A 83 G-E-TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSD---LLLGIYTELEKHAWMLRAFL 141 (142)
T ss_dssp T-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred C-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHHHHHHHhc
Confidence 2 3 6766766666666644444444444444455544444 45556677888887776654
No 198
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=28.59 E-value=70 Score=29.11 Aligned_cols=149 Identities=17% Similarity=0.233 Sum_probs=83.5
Q ss_pred HHhhcCChhHHHHHHHHHHh-hhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccc----
Q 021562 126 EAADKMQGPLRQIFVEFLER-SCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL---- 200 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLer-ScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~l---- 200 (311)
++|.+|+++.|..+.-=|-- +..-...|-.+ -.+..-+ .+|++.-.+...+=.|++|+-.-+.-+.-++..-
T Consensus 65 ~dw~~Lt~~Er~~~~~~l~~~~~~D~~v~~~l-~~l~~~~--~~~e~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~~ 141 (346)
T 2rcc_A 65 KQFPTLTETEQEAFKKIIGLLAFLDSVQTDYS-MRAAEYL--TDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDE 141 (346)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHTTTTCCCHH-HHHHTTB--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHH
Confidence 57788999888876543222 11112334445 6677777 6799999999999999999987777666665411
Q ss_pred ------ccccccccC-----ccccc--C--c-hhh--hhhhhcccccc-hhhHHHHHHHhhhCCCCcccchhhhhhhhhc
Q 021562 201 ------DLGFLTKAR-----KYTFF--K--P-KFI--FYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (311)
Q Consensus 201 ------DLgfLtk~k-----~YTfF--~--P-kfI--fYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCq 261 (311)
+...|.++- -|.=+ . | .+. +-|.++-|.|= |-=|..|| .|.++. ..--+-+=.+-=+.
T Consensus 142 ~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva~~~lEgi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~R 218 (346)
T 2rcc_A 142 IFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFY-NLARNQ--KMVSTSTMINYINR 218 (346)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTTHHHHHHHH-HHHHTT--SSHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCC--CchhHHHHHHHHHh
Confidence 222333211 11000 0 0 110 11234455554 34444555 555542 12122222344467
Q ss_pred cccchhhHHHHHHh----hCcch
Q 021562 262 DENRHGDFFSALMK----AQPQF 280 (311)
Q Consensus 262 DEnRHGdfFa~lmr----aqP~l 280 (311)
||.+||+|...+++ ..|++
T Consensus 219 DE~~H~~f~~~l~~~l~~e~~~~ 241 (346)
T 2rcc_A 219 DEQLHVYLFTNIFKELLVEFPEL 241 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHHHhcCChh
Confidence 99999999888765 47766
No 199
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=28.54 E-value=67 Score=23.41 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhcc--CCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-------ChhH
Q 021562 101 EFEALLQEFKTDY--NQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-------NPVV 171 (311)
Q Consensus 101 E~~Aml~Efr~Dy--Nr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-------nP~l 171 (311)
++..+...+ |. |+.-.+--+||...+..+....-..-++-| +.+-..=+|.|-|.|...-+... ...+
T Consensus 10 ~l~~~F~~~--D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 86 (156)
T 1wdc_C 10 DLKDVFELF--DFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY 86 (156)
T ss_dssp HHHHHHHHH--HHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred HHHHHHHHH--ccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence 344444443 55 666677778887776654322222335555 66666678888888876544322 2567
Q ss_pred HHHhhccccchhhhhhhhh
Q 021562 172 AEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (311)
.++|..+-+| +-|+|+
T Consensus 87 ~~~F~~~D~d---~~G~I~ 102 (156)
T 1wdc_C 87 MEAFKTFDRE---GQGFIS 102 (156)
T ss_dssp HHHHHTTCSS---SSSEEE
T ss_pred HHHHHHhCCC---CCCcCc
Confidence 8888877665 345554
No 200
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=28.39 E-value=66 Score=23.26 Aligned_cols=74 Identities=8% Similarity=0.177 Sum_probs=40.0
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CC-----hhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
...+..++++.++..+-.| +-=++|...+.. +. .+.+..| +.+-..=+|+|-..|+.+=++.-
T Consensus 45 g~~~~~~~~~~l~~~~d~~------i~~~eF~~~~~~~~~~~~~~~~l~~~F-----~~~D~d~~G~I~~~el~~~l~~~ 113 (146)
T 2qac_A 45 GLAPSSIDEKKIKELYGDN------LTYEQYLEYLSICVHDKDNVEELIKMF-----AHFDNNCTGYLTKSQMKNILTTW 113 (146)
T ss_dssp TCCCCHHHHHHHHHHHCSE------ECHHHHHHHHHHTCCTTCCHHHHHHHH-----HTTCTTCSSEEEHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhCCC------CCHHHHHHHHHHHhcCcchHHHHHHHH-----HHhCCCCCCCCCHHHHHHHHHHh
Confidence 3445556666666665444 555566554442 21 2233444 33345567888777777655432
Q ss_pred -----ChhHHHHhhcc
Q 021562 168 -----NPVVAEIFSLM 178 (311)
Q Consensus 168 -----nP~lae~F~lM 178 (311)
...+.++|..+
T Consensus 114 g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 114 GDALTDQEAIDALNAF 129 (146)
T ss_dssp SSCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc
Confidence 23566666655
No 201
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=28.33 E-value=1.7e+02 Score=23.04 Aligned_cols=76 Identities=17% Similarity=0.334 Sum_probs=48.3
Q ss_pred ccCCcccccChhHHHHhh--------cCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-------------cChh
Q 021562 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-------------TNPV 170 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-------------~nP~ 170 (311)
|.|+.-++--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+.. ....
T Consensus 113 D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
T 2f33_A 113 DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKE 192 (263)
T ss_dssp STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 666667777778876554 3344444445666667777777899999988765532 1245
Q ss_pred HHHHhhccccchhhhhhhhh
Q 021562 171 VAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (311)
+.++|..+-+| +-|+|+
T Consensus 193 ~~~~F~~~D~d---~~G~is 209 (263)
T 2f33_A 193 FNKAFELYDQD---GNGYID 209 (263)
T ss_dssp HHHHHHHHCCS---SSSCEE
T ss_pred HHHHHHHhCCC---CCCccc
Confidence 67778766554 345543
No 202
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=28.31 E-value=1.1e+02 Score=21.21 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=40.5
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC----hhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (311)
.+..+|++.|+.++- .| --+--+||...+. ++ .+.++.|- .+-..=+|+|-..|+.+-++.-
T Consensus 6 ~~t~~e~~~~~~~~d--~~--g~i~~~ef~~~~~-~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~~~~~~g 75 (110)
T 1pva_A 6 LLKADDIKKALDAVK--AE--GSFNHKKFFALVG-LKAMSANDVKKVFK-----AIDADASGFIEEEELKFVLKSFAADG 75 (110)
T ss_dssp HSCHHHHHHHHHHTC--ST--TCCCHHHHHHHHT-CTTSCHHHHHHHHH-----HHCTTCSSSBCHHHHHTGGGGTCTTC
T ss_pred cCCHHHHHHHHHhcC--CC--CcCcHHHHHHHHc-cCcchHHHHHHHHH-----HhCCCCCCcCcHHHHHHHHHHHhhcC
Confidence 445567777777753 11 1233356655543 22 23344443 3345567888887777666532
Q ss_pred ----ChhHHHHhhccccc
Q 021562 168 ----NPVVAEIFSLMSRD 181 (311)
Q Consensus 168 ----nP~lae~F~lMaRD 181 (311)
...+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~d~~ 93 (110)
T 1pva_A 76 RDLTDAETKAFLKAADKD 93 (110)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHhCCC
Confidence 23456666655444
No 203
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=28.05 E-value=62 Score=26.14 Aligned_cols=135 Identities=12% Similarity=0.091 Sum_probs=92.9
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 021562 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (311)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (311)
++..++-|-+-...|+...-+|--++.-.++. -|.+++.|.-.|-+|..||--+=+-+.+.|-.+.++-+.+.+ -.|-
T Consensus 17 ~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~-~~~~ 95 (176)
T 1vlg_A 17 SEKVRKALNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPP-SNWN 95 (176)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC-CCCC
Confidence 34567788888888888777777777665544 589999999999999999999999999999988887776653 2333
Q ss_pred CchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHH
Q 021562 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (311)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (311)
.+.=++=+..=.||.--.+|-.+...-++.-+ +..-++|+..-+++-.|...+..++
T Consensus 96 ~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D---~~t~~~l~~~l~eq~ee~~~l~~~l 152 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKD---HATVSFLKWFVDEQVEEEDQVREIL 152 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556655555666655566666666665544 4445555545555445555555444
No 204
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=28.05 E-value=40 Score=24.32 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=24.0
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
|.|+.-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-+
T Consensus 93 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~ 145 (148)
T 1m45_A 93 DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 145 (148)
T ss_dssp CSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 44555555555555554443222212223333333434445666666655443
No 205
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=28.02 E-value=56 Score=29.61 Aligned_cols=141 Identities=16% Similarity=0.071 Sum_probs=77.2
Q ss_pred HHHhhcCChhHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc----
Q 021562 125 KEAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA---- 199 (311)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~---- 199 (311)
.++|..|+++.|..+.--|--=..++- .|-.+-.-+...+ .+|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 42 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~ 119 (319)
T 3n37_A 42 IPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDA--LTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVD 119 (319)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 357889999998876543321111110 1222223344545 579999999999999999998766666554432
Q ss_pred ------cccccccccCc-----c---cccCchhhhhhhhcccccc-hhhHHHHHHHhhhCCCCcccchhhhhhhhhcccc
Q 021562 200 ------LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDEN 264 (311)
Q Consensus 200 ------lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEn 264 (311)
.+...|.++-+ | ++. -+.| |-++-|.|- |-=|..|| .|.++. ..--+=+=.+-=+.||.
T Consensus 120 ~~f~~i~~~p~l~~K~~~i~~~~~~~~~~-~~~v--a~~~lEgi~Fys~F~~~~-~l~~~g--~m~g~~~~i~~I~RDE~ 193 (319)
T 3n37_A 120 AAYAWSEENAPLQRKAQIIQQHYRGDDPL-KKKI--ASVFLESFLFYSGFWLPM-YFSSRG--KLTNTADLIRLIIRDEA 193 (319)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHSSCHH-HHHH--HHHHHHHTTTHHHHHHHH-HHHHTT--CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHcCchHH-HHHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CchhHHHHHHHHHHhHH
Confidence 23333433211 0 111 1112 244566663 35555566 566552 22222223344568999
Q ss_pred chhhHHHHH
Q 021562 265 RHGDFFSAL 273 (311)
Q Consensus 265 RHGdfFa~l 273 (311)
.||+|...+
T Consensus 194 ~H~~f~~~l 202 (319)
T 3n37_A 194 VHGYYIGYK 202 (319)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999985544
No 206
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=27.50 E-value=55 Score=29.40 Aligned_cols=140 Identities=15% Similarity=0.084 Sum_probs=75.9
Q ss_pred HHhhcCChhHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc-----
Q 021562 126 EAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA----- 199 (311)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~----- 199 (311)
++|+.|+++.|..+.--|--=..++- .|-.+-.-+...+ ..|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 52 ~dw~~Ls~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~~ 129 (296)
T 3mjo_A 52 QSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINE 129 (296)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57788999888776543321111110 1112223344555 579999999999999999998766666554432
Q ss_pred -----cccccccccCc-----c---cccCchhhhhhhhcccccc-hhhHHHHHHHhhhCCCCcccchhhhhhhhhccccc
Q 021562 200 -----LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDENR 265 (311)
Q Consensus 200 -----lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnR 265 (311)
.+...|.|+-+ | ++.+ +.| |-++-|.|- |-=|..|| .|.++. ..--+=+=.+-=+.||..
T Consensus 130 ~f~~i~~~p~l~~K~~~i~~~~~~~~~~~-~~v--a~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE~l 203 (296)
T 3mjo_A 130 AFRWSEENENLQRKAKIIMSYYNGDDPLK-KKV--ASTLLESFLFYSGFYLPM-YLSSRA--KLTNTADIIRLIIRDESV 203 (296)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHTSSCHHH-HHH--HHHHHHHTHHHHHTHHHH-HHHHTT--SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhcCCcHHH-HHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CcchHHHHHHHHHHHHHH
Confidence 23333433211 0 1111 112 234556653 34455565 566552 222222333445789999
Q ss_pred hhhHHHHH
Q 021562 266 HGDFFSAL 273 (311)
Q Consensus 266 HGdfFa~l 273 (311)
||+|...+
T Consensus 204 H~~f~~~l 211 (296)
T 3mjo_A 204 HGYYIGYK 211 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99985544
No 207
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=27.43 E-value=63 Score=24.03 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=48.5
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CC-----hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-
Q 021562 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK- 166 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~- 166 (311)
...+..+++..++.++-.| ..-.+.-.+|...+.. +. .+.++.|--| -..=+|++-..||.+=++.
T Consensus 40 ~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~-----D~d~~G~I~~~El~~~l~~~ 112 (148)
T 2lmt_A 40 GQNPTEAELQDLIAEAENN--NNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIF-----DRDGDGFISPAELRFVMINL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHH-----HSSCSSEECHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhcccC--CCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHH-----CCCCcCcCcHHHHHHHHHHc
Confidence 5566677888888776444 4444555666543322 21 3356666543 5677888888887765432
Q ss_pred ----cChhHHHHhhccccc
Q 021562 167 ----TNPVVAEIFSLMSRD 181 (311)
Q Consensus 167 ----~nP~lae~F~lMaRD 181 (311)
+...+.++|..+-.|
T Consensus 113 g~~~~~~e~~~l~~~~D~d 131 (148)
T 2lmt_A 113 GEKVTDEEIDEMIREADFD 131 (148)
T ss_dssp TCCCCHHHHHHHHHHHCCS
T ss_pred CccccHHHHHHHHHHhCCC
Confidence 234567777766554
No 208
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=27.22 E-value=1.1e+02 Score=23.65 Aligned_cols=84 Identities=24% Similarity=0.284 Sum_probs=49.4
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChh-HHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChh
Q 021562 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPV 170 (311)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~ 170 (311)
..++|++.+.+.|..|. +.-.+--+||...+..+-+. .-...+.-+-+.+-..=+|.|-+.|+..-+.. ....
T Consensus 30 ~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~ 108 (207)
T 2d8n_A 30 FSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQK 108 (207)
T ss_dssp CCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTT
T ss_pred CCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence 35567888888776652 34456667787766655221 11223444444556667888988888765532 2335
Q ss_pred HHHHhhccccc
Q 021562 171 VAEIFSLMSRD 181 (311)
Q Consensus 171 lae~F~lMaRD 181 (311)
+.++|..+-+|
T Consensus 109 ~~~~f~~~D~d 119 (207)
T 2d8n_A 109 LEWAFSLYDVD 119 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhcCC
Confidence 66677665444
No 209
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=26.74 E-value=34 Score=26.49 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (311)
-.+-|+.....|-...-.|+++..-..+ ..|.++.++.-+..||-.|+-+|.+.|...+
T Consensus 85 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~ 144 (161)
T 3uoi_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666667777777778888654432 5899999999999999999999999887654
No 210
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=26.39 E-value=55 Score=29.85 Aligned_cols=141 Identities=15% Similarity=0.078 Sum_probs=76.5
Q ss_pred HHHhhcCChhHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc----
Q 021562 125 KEAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA---- 199 (311)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~---- 199 (311)
.++|..|+++.|..+.--|--=..++- .|-.+-.-+...+ ..|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 52 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~ 129 (329)
T 3dhz_A 52 IQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQIN 129 (329)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 357888999988876543321111111 1222222344555 579999999999999999998766666554432
Q ss_pred ------cccccccccCc-----c---cccCchhhhhhhhcccccc-hhhHHHHHHHhhhCCCCcccchhhhhhhhhcccc
Q 021562 200 ------LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDEN 264 (311)
Q Consensus 200 ------lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEn 264 (311)
.+...|.++-+ | ++.+ +.| |-++-|.|- |-=|..|| .|.++. ..--+=+=.+-=+.||.
T Consensus 130 ~~f~~i~~~p~l~~K~~~i~~~~~~~~~~~-~~v--a~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE~ 203 (329)
T 3dhz_A 130 EAFRWSEENENLQRKAKIIMSYYNGDDPLK-KKV--ASTLLESFLFYSGFYLPM-YLSSRA--KLTNTADIIRLIIRDES 203 (329)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTSSCHHH-HHH--HHHHHHHTTTHHHHHHHH-HHHTTT--SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHcCCcHHH-HHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CCccHHHHHHHHHHHHH
Confidence 22333433211 0 1111 112 244556653 35555666 565542 12222223344568999
Q ss_pred chhhHHHHH
Q 021562 265 RHGDFFSAL 273 (311)
Q Consensus 265 RHGdfFa~l 273 (311)
.||+|...+
T Consensus 204 lH~~f~~~l 212 (329)
T 3dhz_A 204 VHGYYIGYK 212 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999985544
No 211
>3dka_A DINB-like protein; DINB/YFIT-like putative metalloenzyme fold, structural genom joint center for structural genomics, JCSG; 2.30A {Bacillus subtilis}
Probab=26.37 E-value=45 Score=24.99 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=27.6
Q ss_pred hhHHHHhhccccchhhhhhhhhhhhccccccc
Q 021562 169 PVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL 200 (311)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNkal~Df~l~l 200 (311)
-.+.++...+.-.++.|.|=|.-.|+..|+..
T Consensus 116 ~t~~~~l~~~~~H~~hH~GQi~~~lr~~g~~~ 147 (155)
T 3dka_A 116 VTGRALLQLAMEHEIHHKGNLFVYVREMGHTE 147 (155)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHhHHHHhHHHHHHHHHHcCCCC
Confidence 45677888888999999999999999998864
No 212
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=26.24 E-value=59 Score=23.52 Aligned_cols=13 Identities=8% Similarity=0.337 Sum_probs=6.9
Q ss_pred hhHHHHhhccccc
Q 021562 169 PVVAEIFSLMSRD 181 (311)
Q Consensus 169 P~lae~F~lMaRD 181 (311)
..+.++|..+-+|
T Consensus 84 ~~l~~~F~~~D~d 96 (146)
T 2qac_A 84 EELIKMFAHFDNN 96 (146)
T ss_dssp HHHHHHHHTTCTT
T ss_pred HHHHHHHHHhCCC
Confidence 3456666655443
No 213
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=26.23 E-value=58 Score=27.38 Aligned_cols=65 Identities=14% Similarity=0.222 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc-ccccc
Q 021562 134 PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD-FNYAL 200 (311)
Q Consensus 134 ~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D-f~l~l 200 (311)
.++..|++-|-.=.-+|-..-=.+..+.+++ .||.|++.|.--..+=-+|..=|...+.. .|...
T Consensus 5 ~l~dlf~~~L~D~y~aE~q~~~al~~~~~~a--~~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~ 70 (166)
T 2gs4_A 5 TIEDVFIHLLSDTYSAEKQLTRALAKLARAT--SNEKLSQAFHAHLEETHGQIERIDQVVESESNLKI 70 (166)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999999999999999999 77999999987666667788888888888 77643
No 214
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=26.09 E-value=45 Score=23.86 Aligned_cols=38 Identities=13% Similarity=0.283 Sum_probs=22.1
Q ss_pred cccchhhHHHHhhhhcccC--------hhHHHHhhccccchhhhhhhhh
Q 021562 150 EFSGFLLYKELGRRLKKTN--------PVVAEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 150 EFSGflLyKEl~rrlk~~n--------P~lae~F~lMaRDEARHAGFlN 190 (311)
.-+|.|-|.|...-+.... ..+.++|..+-+| +-|+|+
T Consensus 49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~i~ 94 (140)
T 1ggw_A 49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKD---ATGMIG 94 (140)
T ss_dssp TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSS---CSSCCC
T ss_pred CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCC---CCCcEe
Confidence 4467777776655443321 5677888776655 345543
No 215
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=25.96 E-value=37 Score=24.77 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=10.3
Q ss_pred cccccHHHHHHHHHHHh
Q 021562 94 NKKLNQAEFEALLQEFK 110 (311)
Q Consensus 94 d~~~~r~E~~Aml~Efr 110 (311)
|-...-+||-+++....
T Consensus 64 ~g~i~~~eF~~~~~~~~ 80 (158)
T 2jnf_A 64 NGDIDFDSFKIIGARFL 80 (158)
T ss_dssp CSEECHHHHHHHHHHHC
T ss_pred CCcCcHHHHHHHHHHHh
Confidence 33456677777776553
No 216
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=25.76 E-value=1.8e+02 Score=20.71 Aligned_cols=17 Identities=24% Similarity=0.296 Sum_probs=8.2
Q ss_pred hccccchhhHHHHhhhh
Q 021562 148 TAEFSGFLLYKELGRRL 164 (311)
Q Consensus 148 TaEFSGflLyKEl~rrl 164 (311)
-..=+|.|-..|+.+-+
T Consensus 85 D~d~~G~i~~~e~~~~l 101 (155)
T 3ll8_B 85 DMDKDGYISNGELFQVL 101 (155)
T ss_dssp CTTCSSCBCHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHH
Confidence 44445555555554433
No 217
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=25.71 E-value=39 Score=25.79 Aligned_cols=58 Identities=21% Similarity=0.222 Sum_probs=47.6
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (311)
-.+-|+.....|-...-.|+++.+...+ ..|..+.++.-+..||..|+-++...+...
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 141 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLI 141 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677778888888889998886543 579999999999999999999999887653
No 218
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=25.67 E-value=26 Score=27.73 Aligned_cols=77 Identities=10% Similarity=0.139 Sum_probs=42.4
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hhHHHHhhccccchhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PVVAEIFSLMSRDEARH 185 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~lae~F~lMaRDEARH 185 (311)
|.|..-.+--+||...+..+-...-..-++-+.+.+-..-+|.+-|.|...-+.... ..|.+.|...-+| +
T Consensus 21 D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d---~ 97 (176)
T 2lhi_A 21 DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKN---G 97 (176)
T ss_dssp CSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSS---C
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCC---C
Confidence 555666666666665554432222233344455566666677777776654332221 2478888876554 3
Q ss_pred hhhhhh
Q 021562 186 AGFLNK 191 (311)
Q Consensus 186 AGFlNk 191 (311)
-|+|+.
T Consensus 98 ~G~I~~ 103 (176)
T 2lhi_A 98 DGLISA 103 (176)
T ss_dssp SSSBCH
T ss_pred CCcCcH
Confidence 566553
No 219
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=25.63 E-value=41 Score=26.71 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=47.7
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (311)
-.+-|+.....|-...-.|+++.....+ ..|..+.++.-+..||..|+-.|...|...
T Consensus 88 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l 146 (179)
T 1nfv_A 88 VPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHI 146 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888899998875532 589999999999999999998888877643
No 220
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=25.58 E-value=1.4e+02 Score=22.77 Aligned_cols=135 Identities=7% Similarity=-0.055 Sum_probs=96.6
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc--------c
Q 021562 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--------L 205 (311)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--------L 205 (311)
.|+.-++-|-.-...|++..+.|+-..=.++..+ ..+++.|.-.+-+|..||-=|-+-+.+.|-..+++. +
T Consensus 2 ~~~~v~~~LN~~la~~~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i 81 (146)
T 1jig_A 2 TKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSV 81 (146)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcC
Confidence 3566788888889999999999999988886553 568999999999999999999999999999988875 3
Q ss_pred cccCcccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHHHH
Q 021562 206 TKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (311)
Q Consensus 206 tk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (311)
+..+. .+ .++=++=+.+=.|+..=.+|=.+...-+..-++.-..+ ++..-.++-.|-.++.+.+
T Consensus 82 ~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~l---l~~~l~e~ek~~w~l~~~l 145 (146)
T 1jig_A 82 NEGTS-KE-SAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADM---LLAIHTTLEQHVWMLSAFL 145 (146)
T ss_dssp CCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHHhc
Confidence 33222 23 67767766665565544444444444455555444444 4555666777877776543
No 221
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=25.46 E-value=76 Score=24.63 Aligned_cols=60 Identities=25% Similarity=0.277 Sum_probs=30.0
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
..++++.++.++ |.|..-.+--+||...+..+ .+.++.|- .+-..=+|.|-..|+.+-++
T Consensus 71 ~~~~~~~l~~~~--D~d~~g~i~~~eF~~~~~~~-~~~~~~F~-----~~D~d~~G~I~~~el~~~l~ 130 (198)
T 1juo_A 71 NLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFI-----SFDTDRSGTVDPQELQKALT 130 (198)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHH-HHHHHHHH-----TTCTTCCSEECHHHHHHHHH
T ss_pred CHHHHHHHHHHh--CCCCCCeECHHHHHHHHHHH-HHHHHHHH-----HhCCCCCCcCCHHHHHHHHH
Confidence 445555555554 33333445555565544432 23344442 23445567777777666553
No 222
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=25.29 E-value=58 Score=25.96 Aligned_cols=61 Identities=15% Similarity=0.260 Sum_probs=41.5
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
.+..+|++.|++++- .|..-.+.=+||...+..+ .+.++.|--| - .=+|++-.+||+.=++
T Consensus 42 ~~~~~~~~~l~~~~D--~d~~G~I~f~EF~~~~~~~-~~l~~aF~~f-----D-d~~G~I~~~El~~~l~ 102 (174)
T 2i7a_A 42 MFSLDECRSLVALME--LKVNGRLDQEEFARLWKRL-VHYQHVFQKV-----Q-TSPGVLLSSDLWKAIE 102 (174)
T ss_dssp CCCHHHHHHHHHHHC--SSCSSEECHHHHHHHHHHH-HHHHHHHHHH-----C-SBTTBEEGGGHHHHHH
T ss_pred CCCHHHHHHHHHHHC--CCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----c-CCCCcCCHHHHHHHHH
Confidence 344578888888774 4444456667887776654 4567777654 5 6689998888877664
No 223
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=25.15 E-value=31 Score=26.78 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=46.5
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhc-ccChhHHHHhhccccchhhhhhhhhhhhcccc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLK-KTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk-~~nP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (311)
-.+-|+.+...|-...-.|+++..--. ...|..+.+|.-+.+||-.|+-+|.+.+...+
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i~ 142 (161)
T 3gvy_A 83 LRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMG 142 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777778777778888765443 25899999999999999999999999876543
No 224
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=24.95 E-value=1e+02 Score=20.38 Aligned_cols=53 Identities=8% Similarity=0.047 Sum_probs=33.6
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 24 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 76 (85)
T 2ktg_A 24 DKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76 (85)
T ss_dssp CTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 77777777778887777665433333344555556666667888887765433
No 225
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=24.61 E-value=60 Score=29.10 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIF 175 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F 175 (311)
+++++.+++++ |.|..-.+--+||...+........+.-+.-+-+.+-..=+|.+-..|+.+-++. ...++.++|
T Consensus 381 ~~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAV--DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHH--TCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHH
Confidence 34444555544 5556666666777665444322222233333344456677888888888876643 123345555
Q ss_pred hccc
Q 021562 176 SLMS 179 (311)
Q Consensus 176 ~lMa 179 (311)
.-+-
T Consensus 459 ~~~D 462 (484)
T 3nyv_A 459 SEVD 462 (484)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5443
No 226
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=24.50 E-value=67 Score=24.02 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=21.0
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC
Q 021562 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM 131 (311)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l 131 (311)
....+|++.|+.++ |.|..-.+--+||...+..+
T Consensus 73 ~~~~~e~~~~~~~~--D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 73 GMSKEDAQGMVREG--DLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp CCCHHHHHHHHHHH--CSSCSSSBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHh
Confidence 45667888888876 44444445556666555544
No 227
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=24.35 E-value=1.1e+02 Score=21.98 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=47.5
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcC--ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhH
Q 021562 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVV 171 (311)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l--~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~l 171 (311)
|++.+.+-|+ -|.|+.-.+--+|| ..+..+ .++.++ +.+.+-..=+|.|-|.|...-+... ...+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~~~~~-----~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 4 EIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQR-----VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCTTHHH-----HHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccchHHHH-----HHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 3344444443 37777777877888 333332 333333 4445566678999998887666432 1567
Q ss_pred HHHhhccccchhhhhhhhh
Q 021562 172 AEIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (311)
.++|..+-+| +-|+|+
T Consensus 78 ~~~F~~~D~d---~~G~i~ 93 (155)
T 3ll8_B 78 RFAFRIYDMD---KDGYIS 93 (155)
T ss_dssp HHHHHHHCTT---CSSCBC
T ss_pred HHHHHHhCCC---CCCcCc
Confidence 8888876554 345554
No 228
>1utg_A Uteroglobin; steroid binding; 1.34A {Oryctolagus cuniculus} SCOP: a.101.1.1 PDB: 2utg_A
Probab=24.29 E-value=60 Score=23.85 Aligned_cols=48 Identities=19% Similarity=0.413 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHHhhccCCcccccC--hhHHHHhhcCChhHHHHHHHHHHhhhhc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRN--KEFKEAADKMQGPLRQIFVEFLERSCTA 149 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~--~eF~~~~d~l~~~~r~~FidFLerScTa 149 (311)
..+|..+-+++|..|+. ... .++++..|.|++++|..+..+|++=-.|
T Consensus 17 s~~~Y~~~l~~y~~~~~----~~~A~~~lK~C~d~ls~e~~~~i~~~l~kI~~S 66 (70)
T 1utg_A 17 TPSSYETSLKEFEPDDT----MKDAGMQMKKVLDSLPQTTRENIMKLTEKIVKS 66 (70)
T ss_dssp CHHHHHHHHHTTCCCHH----HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHcC
Confidence 33456666665544332 222 2789999999999999999999864433
No 229
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=24.29 E-value=62 Score=20.37 Aligned_cols=25 Identities=16% Similarity=0.204 Sum_probs=15.2
Q ss_pred HHHHHhhhhccccchhhHHHHhhhh
Q 021562 140 VEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrl 164 (311)
++-+.+.+-..=+|.|-|.|..+-+
T Consensus 38 ~~~~~~~~D~~~~g~i~~~ef~~~~ 62 (66)
T 3li6_A 38 LQLIFKSIDADGNGEIDQNEFAKFY 62 (66)
T ss_dssp HHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 3444445555667777777776654
No 230
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=24.15 E-value=27 Score=22.46 Aligned_cols=16 Identities=44% Similarity=0.650 Sum_probs=12.4
Q ss_pred hhHHHHHHhhCcchhh
Q 021562 267 GDFFSALMKAQPQFLN 282 (311)
Q Consensus 267 GdfFa~lmraqP~ll~ 282 (311)
-|||..|+|+|-.-+.
T Consensus 2 d~ff~ml~kcq~srld 17 (26)
T 4g5s_E 2 EDFFDILVKCQGSRLD 17 (26)
T ss_dssp -CHHHHHHHHSCCCCS
T ss_pred hhHHHHHHHhcccccc
Confidence 3799999999976554
No 231
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=24.13 E-value=61 Score=27.44 Aligned_cols=64 Identities=9% Similarity=0.049 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc
Q 021562 134 PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (311)
Q Consensus 134 ~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (311)
.++..|++.|..=.-+|-..-=.+..+.+++ .||.|++.|.-=-.+=-+|..=|.+.+...|..
T Consensus 12 ~l~dlf~~~L~Diy~aE~q~~~aL~~~~~~a--~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~ 75 (173)
T 2gyq_A 12 TMEDLLLHGLRDIYYAEQQITKALPKMIEQA--TNRDLSQGLTSHLEETQKQIERLDQVFKKLGQK 75 (173)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999 779999999876666677888888888887764
No 232
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=24.10 E-value=24 Score=25.25 Aligned_cols=14 Identities=29% Similarity=0.724 Sum_probs=8.3
Q ss_pred HHhhhCCCCcccch
Q 021562 239 RHLKANPEFQCYPI 252 (311)
Q Consensus 239 RHLe~~Pe~rf~PI 252 (311)
+|.+.||+|++.|-
T Consensus 64 ~~~~~~p~Yky~pr 77 (81)
T 1i11_A 64 QHLEKYPDYKYKPR 77 (81)
T ss_dssp HHHTTCSCC-----
T ss_pred HHHHHCCCCeeccC
Confidence 79999999999883
No 233
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=23.87 E-value=88 Score=20.27 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=31.4
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 17 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 69 (77)
T 2joj_A 17 DTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69 (77)
T ss_dssp CCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 66666666667776665544322223334455555556667888888776654
No 234
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=23.78 E-value=68 Score=22.41 Aligned_cols=66 Identities=17% Similarity=0.224 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 021562 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (311)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (311)
..+++..+...| |.|+.-++--+||...+..+....-..=++-|.+.+-..=+|.|-|.|..+-+.
T Consensus 22 ~~~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 22 HYHAITQEFENF--DTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 87 (105)
T ss_dssp THHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred hHHHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence 345555555554 666666777777766655432211112233344445555678888888877664
No 235
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=23.56 E-value=99 Score=23.62 Aligned_cols=62 Identities=16% Similarity=0.220 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhc------------CChhHHHHHHHHHHhhhhccccchhhHHHHhh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADK------------MQGPLRQIFVEFLERSCTAEFSGFLLYKELGR 162 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~------------l~~~~r~~FidFLerScTaEFSGflLyKEl~r 162 (311)
++++..+...| |.|..-++--+||...+.. ++++.-+..++-+-+.+-..=.|.|-|.|..+
T Consensus 67 ~~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~ 140 (143)
T 3a4u_B 67 QELQLHYFKMH--DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAK 140 (143)
T ss_dssp HHHHHHHHHHT--CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC
T ss_pred HHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence 45566666655 6666667777777666544 33333333344443455555567777776654
No 236
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=23.53 E-value=57 Score=24.48 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hhHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhcc
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLM 178 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lM 178 (311)
+++..+...+ |.|+.-.+--+||...+..+. ......-++-+.+.+-..=+|.|-|.|...-+. .-..+.++|..+
T Consensus 7 ~~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~-~~~~~~~~F~~~ 83 (172)
T 2znd_A 7 SFLWNVFQRV--DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK-YITDWQNVFRTY 83 (172)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444444444 444555566666666554432 111112233333444445566666666655442 224566677665
Q ss_pred ccc
Q 021562 179 SRD 181 (311)
Q Consensus 179 aRD 181 (311)
-+|
T Consensus 84 D~d 86 (172)
T 2znd_A 84 DRD 86 (172)
T ss_dssp CTT
T ss_pred CCC
Confidence 444
No 237
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=23.46 E-value=1.3e+02 Score=24.84 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=102.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccC
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (311)
.++-|-+=...|+.-.-+|--++.-.... -|-++..|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.|-..-.|=.
T Consensus 13 v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~ 92 (176)
T 3ka8_A 13 CEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDEWGN 92 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCCccccCC
Confidence 45556666678888888888888877633 588999999999999999999989999999999999998875555556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhh-ccccchhhHHHHH
Q 021562 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWC-QDENRHGDFFSAL 273 (311)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WC-qDEnRHGdfFa~l 273 (311)
|.=++=+++--||---..+-.++..=+++-|+. ..+|++.|. .++-.|-+-+.-+
T Consensus 93 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~---t~~fLe~~fl~eQve~~~~l~~~ 148 (176)
T 3ka8_A 93 TLEAMQAALQLEKTVNQALLDLHKLATDKVDPH---LCDFLESEYLEEQVKHIKRIGDF 148 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888889999999999999888876654 456666654 4445565554443
No 238
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=22.82 E-value=80 Score=22.54 Aligned_cols=82 Identities=12% Similarity=0.329 Sum_probs=42.9
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcCChh-HHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhHH
Q 021562 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVA 172 (311)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~la 172 (311)
+++.+.+-|+ -|.|+.-.+--+||...+..+... +..+....+.. -+|.|-|.|...-+... ...+.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-----~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 79 (143)
T 3j04_B 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE-----APGPINFTMFLTMFGEKLNGTDPEDVIR 79 (143)
T ss_dssp HHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT-----SSSCCCHHHHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh-----CCCCcCHHHHHHHHHHHhccCCcHHHHH
Confidence 4444444443 266666666666776655544211 22222222211 57777777765544321 24578
Q ss_pred HHhhccccchhhhhhhhh
Q 021562 173 EIFSLMSRDEARHAGFLN 190 (311)
Q Consensus 173 e~F~lMaRDEARHAGFlN 190 (311)
++|..+-+| +-|+|+
T Consensus 80 ~~F~~~D~d---~~G~I~ 94 (143)
T 3j04_B 80 NAFACFDEE---ASGFIH 94 (143)
T ss_dssp HHHTTSCSS---SCCCCC
T ss_pred HHHHHHCCC---CCCeEc
Confidence 888877655 356554
No 239
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=22.78 E-value=47 Score=25.76 Aligned_cols=99 Identities=17% Similarity=0.217 Sum_probs=0.0
Q ss_pred ChHHHhhhccccccccccHHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHH
Q 021562 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKE 159 (311)
Q Consensus 81 DFd~m~~lf~~~id~~~~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKE 159 (311)
+++.+.+ ......++++.+.+-|+. |.|..-.+--+||... ..+..... ++-|.+.+-..-+|.|-|.|
T Consensus 13 ~~~~~~~------~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~E 82 (202)
T 2bec_A 13 DGDSIRR------ETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPG 82 (202)
T ss_dssp STTTHHH------HHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHH
T ss_pred HHHHHHH------ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHH
Q ss_pred HhhhhcccCh----------------------hHHHHhhccccchhhhhhhhhhh
Q 021562 160 LGRRLKKTNP----------------------VVAEIFSLMSRDEARHAGFLNKG 192 (311)
Q Consensus 160 l~rrlk~~nP----------------------~lae~F~lMaRDEARHAGFlNka 192 (311)
...-+..... .+.++|..+-.| +-|+|+..
T Consensus 83 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~dG~Is~~ 134 (202)
T 2bec_A 83 FVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLD---RDGKISRH 134 (202)
T ss_dssp HHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTT---CSSEECHH
T ss_pred HHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCC---CCCeEcHH
No 240
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=22.69 E-value=84 Score=21.91 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC---ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-------
Q 021562 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------- 166 (311)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------- 166 (311)
+..+|++.|++++-. .-.+-=+||...+..- ..+.++.|- .+-..=+|+|-..|+.+=++.
T Consensus 6 ~s~~ei~~~~~~~d~----~g~i~~~eF~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 6 LKADDINKAISAFKD----PGTFDYKRFFHLVGLKGKTDAQVKEVFE-----ILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp SCHHHHHHHHHHTCS----TTCCCHHHHHHHHTCTTCCHHHHHHHHH-----HHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CCHHHHHHHHHHhCC----CCcCcHHHHHHHHhhccCcHHHHHHHHH-----HHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 445677777776643 1223335565544321 122334443 335566777777777665542
Q ss_pred -cChhHHHHhhccccc
Q 021562 167 -TNPVVAEIFSLMSRD 181 (311)
Q Consensus 167 -~nP~lae~F~lMaRD 181 (311)
....+.++|..+-.|
T Consensus 77 ~~~~~~~~~~~~~D~~ 92 (109)
T 5pal_A 77 LNDTETKALLAAGDSD 92 (109)
T ss_dssp CCHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHhCCC
Confidence 234566677666544
No 241
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=22.57 E-value=1.3e+02 Score=22.05 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=38.7
Q ss_pred HHHHHHhhccCCcccccChhHHHHhhcC---Chh-----HHHHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHH
Q 021562 104 ALLQEFKTDYNQTHFVRNKEFKEAADKM---QGP-----LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (311)
Q Consensus 104 Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~-----~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~la 172 (311)
.++..+ |.|..-.+--+||...+..+ ++. ..+..+.-+-+.+-..=+|.|-..|+.+=++.. ...+.
T Consensus 62 ~lf~~~--D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~ 139 (176)
T 1nya_A 62 YLAKEA--GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA 139 (176)
T ss_dssp HHHHHH--TSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHh--CCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 444444 55555666667776554432 111 112333444445566678999999887766432 22344
Q ss_pred HHhhcc
Q 021562 173 EIFSLM 178 (311)
Q Consensus 173 e~F~lM 178 (311)
++|..+
T Consensus 140 ~~~~~~ 145 (176)
T 1nya_A 140 EAFNQV 145 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 445444
No 242
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=22.19 E-value=95 Score=22.73 Aligned_cols=53 Identities=17% Similarity=0.131 Sum_probs=28.7
Q ss_pred ccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
|.|..-++--+||...+..+....-..=++-+.+.+-..=.|.|-|.|..+-+
T Consensus 89 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 89 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 77777778888887766544211111112222233344457788887776543
No 243
>2a9g_A Arginine deiminase; arginine degradation pathway, catalyti mechanism, hydrolase; HET: ARG; 2.30A {Pseudomonas aeruginosa} SCOP: d.126.1.4 PDB: 1rxx_A 2abr_A* 2aci_A 2aaf_A*
Probab=21.72 E-value=1.1e+02 Score=28.57 Aligned_cols=70 Identities=10% Similarity=0.030 Sum_probs=49.7
Q ss_pred cccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 021562 92 EINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (311)
Q Consensus 92 ~id~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (311)
.++++..++|++++.+-+|.-.=.-|... +-..+.++ +++.|+.|+|....... + |--+.++++.-+..-
T Consensus 45 ~~~~~~A~~Ehd~f~~~Lr~~GV~V~~l~-~ll~e~l~--~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~ 114 (418)
T 2a9g_A 45 VIWVNQAKRDHFDFVTKMRERGIDVLEMH-NLLTETIQ--NPEALKWILDRKITADS--V-GLGLTSELRSWLESL 114 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTTCEEEEHH-HHHHHHHT--SHHHHHHHHHHHSSTTT--T-CTTTHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEch-HHHHHHhc--CHHHHHHHHHHHhhhcc--c-chHHHHHHHHHHHcC
Confidence 35788899999999999998665555544 23455566 58999999998776433 3 666667777666543
No 244
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=21.36 E-value=93 Score=24.88 Aligned_cols=12 Identities=25% Similarity=-0.042 Sum_probs=7.2
Q ss_pred ccHHHHHHHHHH
Q 021562 97 LNQAEFEALLQE 108 (311)
Q Consensus 97 ~~r~E~~Aml~E 108 (311)
...+|+..++..
T Consensus 65 I~~~El~~~l~~ 76 (219)
T 3cs1_A 65 LCYDEVYSGCLE 76 (219)
T ss_dssp BCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 456677666554
No 245
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=21.28 E-value=90 Score=28.35 Aligned_cols=75 Identities=19% Similarity=0.330 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcC-----ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhH
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVV 171 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~l 171 (311)
++++.|++++ |.|..-.+--+||...+... ..+.++.|-. +-..=+|.+-..|+.+-++.. ..++
T Consensus 399 ~~~~~~~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~dG~Is~~El~~~l~~~~~~~~~~ 471 (504)
T 3q5i_A 399 EEVDNILKEV--DFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNL-----FDTDKSGKITKEELANLFGLTSISEKTW 471 (504)
T ss_dssp HHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCCSEECHHHHHHHTTCSCCCHHHH
T ss_pred HHHHHHHHHh--CCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHH-----hcCCCCCcCcHHHHHHHHhhCCCCHHHH
Confidence 3444444444 44455555566776655432 2334444443 356678999999988776532 2345
Q ss_pred HHHhhccccc
Q 021562 172 AEIFSLMSRD 181 (311)
Q Consensus 172 ae~F~lMaRD 181 (311)
.++|.-+-.|
T Consensus 472 ~~~~~~~D~d 481 (504)
T 3q5i_A 472 NDVLGEADQN 481 (504)
T ss_dssp HHHHHTTCSS
T ss_pred HHHHHHhCCC
Confidence 5555544433
No 246
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=21.26 E-value=1.4e+02 Score=20.08 Aligned_cols=63 Identities=17% Similarity=0.292 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 021562 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (311)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (311)
+++..+...+ |.|..-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-+
T Consensus 9 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~ 71 (92)
T 2kn2_A 9 EELKEAFKVF--DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71 (92)
T ss_dssp HHHHHHHHHH--CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 3444444443 55555566666666555544322122223334444455557777777765433
No 247
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=21.05 E-value=1.3e+02 Score=29.73 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=0.0
Q ss_pred ChHHHhhhccccc--------cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChhHHHHHHHHHHhhhhcccc
Q 021562 81 DFDEMETLFNTEI--------NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFS 152 (311)
Q Consensus 81 DFd~m~~lf~~~i--------d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFS 152 (311)
|.+++.++++. + ......++++.|++++ |.|..-.+-=+||...+..+ .+.++.|-.| -..=+
T Consensus 549 s~~El~~~L~~-l~~~~~~~~g~~~s~~~~~~l~~~~--D~d~~G~I~f~EF~~l~~~~-~~l~~~F~~~-----D~d~d 619 (714)
T 3bow_A 549 SAFELQTILRR-VLAKREDIKSDGFSIETCKIMVDML--DEDGSGKLGLKEFYILWTKI-QKYQKIYREI-----DVDRS 619 (714)
T ss_dssp CHHHHHHHHHH-HHTTCTTSCCSCCCHHHHHHHHHHH--CCSSCSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCC
T ss_pred CHHHHHHHHHH-HhhhcccccCCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHH-HHHHHHHHHh-----CCCCC
Q ss_pred chhhHHHHhhhhcc-----cChhHHHHhhccccch
Q 021562 153 GFLLYKELGRRLKK-----TNPVVAEIFSLMSRDE 182 (311)
Q Consensus 153 GflLyKEl~rrlk~-----~nP~lae~F~lMaRDE 182 (311)
|.|-..|+.+=++. .+..+.++|..+. |.
T Consensus 620 G~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~ 653 (714)
T 3bow_A 620 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DD 653 (714)
T ss_dssp SSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CT
T ss_pred CeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CC
No 248
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=20.73 E-value=71 Score=23.96 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=22.7
Q ss_pred hHHHHhhcCChhHHHHHHHHHHhhhh
Q 021562 123 EFKEAADKMQGPLRQIFVEFLERSCT 148 (311)
Q Consensus 123 eF~~~~d~l~~~~r~~FidFLerScT 148 (311)
++++..|.|++++|..+..+|++=-.
T Consensus 42 ~lK~C~D~ls~e~r~~i~~~l~kI~~ 67 (77)
T 1ccd_A 42 QLKRLVDTLPQETRINIVKLTEKILT 67 (77)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHc
Confidence 78999999999999999999986433
No 249
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=20.71 E-value=48 Score=21.15 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=8.4
Q ss_pred ccCCcccccChhHHHHhhc
Q 021562 112 DYNQTHFVRNKEFKEAADK 130 (311)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~ 130 (311)
|.|+.-++--+||...+..
T Consensus 16 D~d~~G~i~~~el~~~l~~ 34 (71)
T 2b1u_A 16 DQDGDGHITVDELRRAMAG 34 (71)
T ss_dssp CCSSSSEEEHHHHHHHGGG
T ss_pred CCCCCCcCcHHHHHHHHHH
Confidence 4444444444444444443
No 250
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=20.66 E-value=1e+02 Score=27.94 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcC-----ChhHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChh
Q 021562 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPV 170 (311)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~ 170 (311)
.++++.+++++ |.|..-.+--+||...+... ..+.++.|-. .-..=+|.+-..|+.+=++. ...+
T Consensus 389 ~~~~~~~~~~~--D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~~G~Is~~El~~~l~~~~~~~~~ 461 (494)
T 3lij_A 389 ESEVDAILGAA--DFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQK-----FDQDGNGKISVDELASVFGLDHLESKT 461 (494)
T ss_dssp HHHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCSSEECHHHHHHHC-CCSCCCHH
T ss_pred HHHHHHHHHHh--CCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHH-----HCCCCCCcCCHHHHHHHHHhcCCCHHH
Confidence 45555666654 55555566667776654332 2234444443 35566888888888876643 1233
Q ss_pred HHHHhhcc
Q 021562 171 VAEIFSLM 178 (311)
Q Consensus 171 lae~F~lM 178 (311)
+.++|.-+
T Consensus 462 ~~~~~~~~ 469 (494)
T 3lij_A 462 WKEMISGI 469 (494)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 44444443
No 251
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=20.36 E-value=1.5e+02 Score=24.30 Aligned_cols=131 Identities=12% Similarity=0.137 Sum_probs=98.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccC-cccccCc
Q 021562 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKAR-KYTFFKP 216 (311)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k-~YTfF~P 216 (311)
.++-|-+=...|+.-.-.|--++.-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.|-+ .-.|=.|
T Consensus 5 v~~~LN~qin~El~As~~Yl~ma~~f~~~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~~~ 84 (168)
T 3e6s_A 5 LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEWSSP 84 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccCCCH
Confidence 44555555566766666676666655433 488999999999999999998888899999999999888876 2445567
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhhhhccccchhhHHHH
Q 021562 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSA 272 (311)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~ 272 (311)
.=++=+.+--||----.+-.++..=+++-|+.-.-++.|| -.++-.|-+-+.-
T Consensus 85 ~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~f---l~eQve~~~~l~~ 137 (168)
T 3e6s_A 85 EDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNPF---HLQQVNEEDKIGS 137 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHH---HHHHHHHHHHHHH
Confidence 7788888889999999999999998888887766665554 3455566555443
No 252
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=20.30 E-value=2.9e+02 Score=22.96 Aligned_cols=121 Identities=16% Similarity=0.116 Sum_probs=99.8
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHhhccccchhhhhhhhhhhhccccccc----ccccccccCc
Q 021562 138 IFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL----DLGFLTKARK 210 (311)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~l----DLgfLtk~k~ 210 (311)
..++-|-+=...|+...-+|=-+++-..+ .-|-+++.|.--|-+|-.||-=|=+-+.+.|-.+ .|+-+.+-..
T Consensus 20 ~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~~l~~i~~p~~ 99 (191)
T 1z6o_M 20 SCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTR 99 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGCCCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhcCCCCCc
Confidence 45677777778999999999999988866 2499999999999999999988888888888888 7777766543
Q ss_pred ccccCchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhhh
Q 021562 211 YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFEN 258 (311)
Q Consensus 211 YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~ 258 (311)
-.|=.|.=++=+.+=-||--=-++-.++..-+++.++.=+.+.+|+|.
T Consensus 100 ~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D~~d~~~~d~Le~ 147 (191)
T 1z6o_M 100 SSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYLTG 147 (191)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 444567778888888899999999999999999988888888888765
No 253
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=20.22 E-value=80 Score=28.79 Aligned_cols=151 Identities=17% Similarity=0.174 Sum_probs=79.0
Q ss_pred HHhh--cCChhHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc---
Q 021562 126 EAAD--KMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--- 199 (311)
Q Consensus 126 ~~~d--~l~~~~r~~FidFLerScTaE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~--- 199 (311)
++|. +|+++.|..+.-=|--=..++ ..|-.+-..+..-+ ++|++...+...+-.|++|+-.-..-+.-++..
T Consensus 63 ~dw~~~~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~~l~~~v--~~~E~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~e 140 (346)
T 1syy_A 63 ELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHV--TNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE 140 (346)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence 4677 899988877654332211111 11222222344545 589999999999999999987766666555432
Q ss_pred -----cccccccccC-----ccccc-Cc-----------hhh-hhhh--hcccccc-hhhHHHHHHHhhhCCCCcccchh
Q 021562 200 -----LDLGFLTKAR-----KYTFF-KP-----------KFI-FYAT--YLSEKIG-YWRYITIYRHLKANPEFQCYPIF 253 (311)
Q Consensus 200 -----lDLgfLtk~k-----~YTfF-~P-----------kfI-fYAt--YLSEKIG-YwRYItIyRHLe~~Pe~rf~PIF 253 (311)
.+...|.|+- -|.=+ .| .+. =+.. .+-|.|= |-=|-.|| .|.++. ..--+=
T Consensus 141 ~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~ 217 (346)
T 1syy_A 141 IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMIL-SFHRQN--KMIGIG 217 (346)
T ss_dssp HTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHH-HHHHTT--SSHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCC--CchhHH
Confidence 2223332211 12111 01 111 0111 2556663 23344443 454443 121222
Q ss_pred hhhhhhhccccchhhHHHHHHh----hCcchh
Q 021562 254 KYFENWCQDENRHGDFFSALMK----AQPQFL 281 (311)
Q Consensus 254 k~Fe~WCqDEnRHGdfFa~lmr----aqP~ll 281 (311)
+=.+-=+.||.+||+|...+++ ..|++.
T Consensus 218 ~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~~~ 249 (346)
T 1syy_A 218 EQYQYILRDETIHLNFGIDLINGIKEENPEIW 249 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCChhh
Confidence 2234446799999999988765 467754
Done!