BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021563
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 224/300 (74%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P +S+D+W AYNLIA GDSV + T+RKV + A+GS + RV+ L I VE +D+D +
Sbjct: 20 PEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSRVRTTLTIAVESIDFDTQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
VLR++G+NI EN++VK+GA+HTL++EL+R F LRK WD++AL+ + A DPT SAD+A
Sbjct: 80 VLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTIALERIEMACDPTQSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAH+ L+ SMT+ RS+IE SIPRK ++ +E L KF+E V+Q+ L+HV+F
Sbjct: 140 VVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFYEQVMQSILRHVNF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+C +IASPGF +DQF+ ++ +A + + +++NKS+ +LVH SSG+KHSLRE+L
Sbjct: 200 DVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKHSLREILQD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V+ + DTKAA EV+AL+ F+ ML +P +A YG KHV A E A++TLLI+D+LFR
Sbjct: 260 PAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQAIETLLISDNLFR 319
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 314 bits (805), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 216/300 (72%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P +++D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSRVRTTLTLCVETIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI EN++VK+GA+HT+E+EL+R F L K +WDS+ LD + QA DP AD+A
Sbjct: 80 QLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSVVLDRIEQACDPAQKADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLA+++LV +MT+ R+++E +IPRK + ++ AL +F+E V+Q L+H +F
Sbjct: 140 VVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDKALERFYEAVMQGILRHFNF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+C ++ASPGF KDQF +L EA R+ + ++EN+S+ ++VH+SSG+K+SL+EVL
Sbjct: 200 DVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKFMVVHSSSGHKYSLKEVLCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + DTKAA EV+AL+DF+ ML +P RA YG HVE A E +A+ LLI+D LFR
Sbjct: 260 PAVTARLSDTKAAGEVKALEDFYKMLQQEPDRAFYGLAHVERASEALAIDILLISDTLFR 319
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 313 bits (803), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 213/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P +++D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L I VE +D+D +
Sbjct: 20 PEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNRVRTTLTICVETIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI EN++VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSIVLERIEQACDPAFSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAHI LV SMT+ R++IETSIPRK +E AL KF+E V+Q L+H++F
Sbjct: 140 VVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEKALEKFYEQVMQGILRHINF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+ ++ASPGF ++QF L L A ++ L+ ++EN+ + + VH+SSG K+SL EVL
Sbjct: 200 DVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKFLQVHSSSGRKYSLTEVLCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + DTKAA E++AL DF+ ML ++P RA YG K VE A+E +AV TLL+TD+LFR
Sbjct: 260 PAVTARLSDTKAACEIKALGDFYKMLQHEPDRAFYGIKQVEKANEALAVDTLLVTDELFR 319
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 214/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H+ F
Sbjct: 140 VVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+K+SL+E L
Sbjct: 200 DVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEALCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E MA+ TLLI+D+LFR
Sbjct: 260 PTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAIDTLLISDELFR 319
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 214/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H+ F
Sbjct: 140 VVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+K+SL+EVL
Sbjct: 200 DVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEVLCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML + P RA YG K VE A+E MA+ TLLI+D+LFR
Sbjct: 260 PTVASRLSDTKAAGEVKALDDFYKMLQHGPDRAFYGLKQVEKANEAMAIDTLLISDELFR 319
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 214/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H+ F
Sbjct: 140 VVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+VV+C ++ASPGF ++QF +L +A + + ++EN+S+ + VH SSG+K+SL+E L
Sbjct: 200 DVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEALCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E MA+ TLLI+D+LFR
Sbjct: 260 PTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAIDTLLISDELFR 319
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 311 bits (797), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 215/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W YNL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H++F
Sbjct: 140 VVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+K+SL+EVL
Sbjct: 200 EVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEVLCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E +A+ TLLI+D+LFR
Sbjct: 260 PTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAIDTLLISDELFR 319
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 215/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W YNL+ GDS+ A T+RKV + ++GS + R++ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNRIRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP +AD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWNADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H++F
Sbjct: 140 VVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH+SSG+K+ L+E L
Sbjct: 200 EVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHSSSGHKYVLKEALCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML ++P RA YG KHVE A+E MA+ TLLI+D+LFR
Sbjct: 260 PAVTSRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKHVEKANEAMAIDTLLISDELFR 319
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 308 bits (790), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 214/300 (71%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P + +D+W +NL+ GDS+ A T+RKV + ++GS + RV+ L + VE +D+D +
Sbjct: 20 PEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQAC 79
Query: 66 VLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA DP SAD+A
Sbjct: 80 QLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAA 139
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V+QA +H++F
Sbjct: 140 VVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINF 199
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+K+SL+E L
Sbjct: 200 EVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEALCD 259
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E +A+ TLLI+D+LFR
Sbjct: 260 PTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAIDTLLISDELFR 319
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 203/298 (68%)
Query: 8 DSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVL 67
+++D+W YNLI GD + A T+RKV+ + ++G+ ++RV L + VE +D+D L
Sbjct: 22 EAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQRVHTMLTVSVESIDFDPGAQEL 81
Query: 68 RIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVL 127
++G+NI EN+ VK+GA+HT+++E +R F L+K WDS+ L+ L+ A DP +AD+A V+
Sbjct: 82 HLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSIDLERLNLALDPAQAADVAAVV 141
Query: 128 MQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNV 187
+ EGLA++ L+ +MT+TR++I+ +IPRK + +E L KF+E V AF++HV+ V
Sbjct: 142 LHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEKGLEKFYEAVSTAFMRHVNLQV 201
Query: 188 VRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPN 247
V+C ++AS GF KD F +HL+ A+ + E +++ +L H+SSG+KH+L+EVL+ P
Sbjct: 202 VKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKFMLTHSSSGFKHALKEVLETPQ 261
Query: 248 VMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
V + DTKA EV+AL F +++ +P RA YG HV A++ +A++TLL+ D LFR
Sbjct: 262 VALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVNRANQELAIETLLVADSLFR 319
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 193/302 (63%)
Query: 4 MEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKE 63
M P + +D+W YN++ GD + A TVR+V++ A+GS RV +KL I VE +D+D +
Sbjct: 18 MCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSRVVMKLRILVENMDFDTK 77
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+ L I+G+ + VK+G++HTL++ELHR F L K+ WD+ ALD + A +P+ +A++
Sbjct: 78 AAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAFALDRVDAACNPSRNAEI 137
Query: 124 AVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHV 183
V++ EGLA+I L+ MTI R RI+ IPRK + Y+ L+KF+++V Q+
Sbjct: 138 GAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQKGLDKFYDSVFQSINSEF 197
Query: 184 DFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 243
DF+ ++ ++ASPGF + ++ A + L+ I+++K++ +++H+S+G+ HSL E+L
Sbjct: 198 DFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSSTGHIHSLNEIL 257
Query: 244 DAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDL 303
P V + + DTK QE++ L F++++ D +A YGP HV A E A+ LLI+D L
Sbjct: 258 KDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFELGAIGELLISDSL 317
Query: 304 FR 305
FR
Sbjct: 318 FR 319
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 151/302 (50%), Gaps = 8/302 (2%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P D +DL+ Y ++ D + + +K ++ + +KL+IKV D+D +
Sbjct: 22 PEDKEDLFTVYQIVDKDDEL--IFKKKFTSKLDEAGKKKSTDLVKLKIKVISEDFDMKDE 79
Query: 66 VLRIRGKNILE-----NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 120
L+ +G + + N + +G + + ++ F + K ++ L++A +
Sbjct: 80 YLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQKLLNEACNIEYK 139
Query: 121 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA-IAGYESALNKFFENVLQAF 179
+D A V++QEG+AH+ LV S TI + +IE S+P+K + ++ KF++ + A
Sbjct: 140 SDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFYKAIYSAM 199
Query: 180 LKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSL 239
K ++F+ ++ ++ SPGF + AE + I++NK + H S+GY +
Sbjct: 200 KKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCSTGYLQGI 259
Query: 240 REVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLI 299
EVL P + ++DTK ++E+ + +F L D +A YG K V A E A+ LL+
Sbjct: 260 NEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGEKEVVKAAEYGAISYLLL 319
Query: 300 TD 301
TD
Sbjct: 320 TD 321
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 20/302 (6%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKL---KLEIKVEVVDYDKEGSV 66
DDLW Y++I PGD V A T+RK + S S AE+V++ L +K E +++ K +
Sbjct: 21 DDLWHLYHVIDPGDVVYAKTLRK--QAQRSDSLRAEKVEVIPVYLGVKAEKINFHKFANQ 78
Query: 67 LRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
+R+ G + + + V +G +HT+ IE ++K W ++ L +A + + A + +
Sbjct: 79 VRVTGPIVYASRDDVPLGKYHTITIEEGTVVTIQKPRWKEHHIERLKEAIEASKRAKVMI 138
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI--AGYESALNKFFENVLQAFLKHV 183
V++ EG A I LV R + + SI R G ES +FF ++ + + +
Sbjct: 139 VVIDEGEADIALV-REYGV---EMVASIRRNLGGKRYNTDRESEEKRFFHDLAKTMAELM 194
Query: 184 DFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 243
+ + A++A PGF K+ FH+ L R+ P E ++++ TS + + EV+
Sbjct: 195 EREKIEKAIVAGPGFVKEDFHKFL------RENYP--ELAKKVVIEDTSVTGRTGIYEVI 246
Query: 244 DAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDL 303
V + + + A+EVQ ++ + + A YG + VE A AV+TLL+ D+L
Sbjct: 247 KRGTVDRVYHENRVAKEVQLVEKVLEHVARNTGLATYGLREVEEAVNYGAVETLLVLDEL 306
Query: 304 FR 305
+
Sbjct: 307 LK 308
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGS 65
P D DDLW YN+I P D V A T R + S SR R+ + L I+V+ +++
Sbjct: 17 PEDQDDLWALYNIIKPLDRVTATTSRDIKHGETSSSR---RIPMTLTIEVKTLEFQPFTE 73
Query: 66 VLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
LRIRG + E + G +HTL IE + ++ K+ W L+ + + LA
Sbjct: 74 RLRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSENELEIISRFTSRKQKVLLA 133
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
E A I L+ ++IP K P + ++ L K+ ++ + L +++
Sbjct: 134 TFDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVL--FQKGLEKYLSSIAEKILDYIN 189
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSS-GYKHSLREVL 243
V VIASPG + ++R R I E K I+ T S G + +RE+L
Sbjct: 190 KFQVDIVVIASPG------------DLQKRVARIIKEKKPVNIITDTVSIGGQSGIRELL 237
Query: 244 DAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDL 303
+V +K+T + + L +F L+ +P YG VE A + AV LL++++L
Sbjct: 238 RRDSVREAVKETNIIKAQRILDEFHKNLSKNPDMVAYGIDDVEYAVKYNAVDKLLVSEEL 297
Query: 304 FRL 306
R+
Sbjct: 298 LRI 300
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 17/300 (5%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK---LEIKVEVVDYDKEGSV 66
DDLW Y++I PGD V A T+RK + S S E+V++ L +KVE +++ K +
Sbjct: 21 DDLWHLYHIITPGDVVYAKTLRK--QSQRSDSLRPEKVEVIPVFLGVKVEKINFHKFANQ 78
Query: 67 LRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
LR+ G I + E V +G +HT+ +E L+K+ W ++ L +A + + A + +
Sbjct: 79 LRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPYYIERLKEAVEASKRAKVMI 138
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V +++G A + +V + I ++ K E KFF +V + +
Sbjct: 139 VTIEDGEAEMAIVREYGLDFIATIRHNLGGKR--YNIKREDEERKFFHDVAKTMKDVMSR 196
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
++ A++A PGF K+ F++ L ++ P + S+I+L TS G + + EV+
Sbjct: 197 ENIQRAIVAGPGFYKEDFYKFL------KENYPDL--ASKIVLDDTSMGGRVGIYEVIKR 248
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
V + +++ A E++ ++ + D YG K VE A AV+ LL+ D+L +
Sbjct: 249 GTVDKVYSESRIANEIKLVEKVIERIAKDEP-VAYGMKEVEEAVNYGAVEILLVLDELLK 307
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 13/298 (4%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW Y++I+PGD V A T+RK ++ S E + + L ++ E ++ + + LR
Sbjct: 21 DDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKINLHRFANQLR 80
Query: 69 IRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVL 127
+ G + + + V +G +HT+ +E ++K+ W S ++ + +A + + A + +V
Sbjct: 81 VTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEASKRAKVMIVA 140
Query: 128 MQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNV 187
M++G A + +V + I +I K E KFF +V + ++
Sbjct: 141 MEDGEAEVAIVREYGLDFIASIRHNIGGKR--YNVKREDEEKKFFHDVAKTIKDLIEREN 198
Query: 188 VRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPN 247
V+ ++A PGF K+ F+ L R+ P E +++L TS G + + EV+
Sbjct: 199 VQKVIVAGPGFYKENFYGFL------RENYP--ELAGKVVLDDTSMGGRVGVYEVIKRGT 250
Query: 248 VMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
V + +T+ AQE++ ++ + D YG K VE A AV TLL+ D+L +
Sbjct: 251 VDKVYTETRVAQEIKLVEKVIERIAKDEP-VAYGLKDVEEAVNYGAVDTLLVLDELLK 307
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 17/309 (5%)
Query: 4 MEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKL-KLEIKVEVVDYDK 62
++P DDLW ++ PGD+V A+T R V D KL +L IKVE ++ K
Sbjct: 17 LQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVESTEFHK 76
Query: 63 EGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LRI+G I + + GA+HTL IE + + K W S ++ + A + + +
Sbjct: 77 FSNRLRIKGTIISD---LDAGAYHTLNIEPYSELSIAKH-WKSDQIERIRDAVEASKRPE 132
Query: 123 LAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKH 182
+ +V ++EG A I + + SRI + K A A +FF V A LK+
Sbjct: 133 VEIVTIEEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFGEVA-AQLKY 191
Query: 183 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 242
D V+ V+A PGF KD F + L R P + K +I+ TSS +EV
Sbjct: 192 AD--KVQTIVVAGPGFIKDDFVKFL------RVNHPAVAQK--VIVEDTSSIGSSGFQEV 241
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
L + + ++ + +E Q ++ + + D +A YG + A + AV+TLLI D+
Sbjct: 242 LRRGAIQRVAEENRITREAQLIEALLSEIAKD-GKATYGFAETKRAVDYGAVETLLIADE 300
Query: 303 LFRLVCSKS 311
R + K
Sbjct: 301 TLRGLREKG 309
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 151/304 (49%), Gaps = 24/304 (7%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK---LEIKVEVVDYDKEGSV 66
DDLW Y++I GD V A T+RK + S S AE+V++ L ++ E +++ K +
Sbjct: 21 DDLWHLYHIIDEGDVVYAKTLRK--QSQRSDSLRAEKVEVIPVFLGVRAEKINFHKFANQ 78
Query: 67 LRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
+R+ G + + E V +G +HT+ IE ++K W ++ L +A + A + +
Sbjct: 79 VRVTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWKEHHIERLREAVSASKRARVMI 138
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALNKFFENVLQAFLK 181
V++ +G A + LV R + I TSI +H Y E+ +FF +V + +
Sbjct: 139 VVIDDGEADMALV-REYGV---EILTSI--RHNLGGKRYNTDREAEEKRFFHDVAKTMEE 192
Query: 182 HVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLRE 241
++ V A++A PGF K+ F++ L R+ P E ++++ TS + + E
Sbjct: 193 IMNREKVEKAIVAGPGFVKEDFYKFL------RENYP--ELVKKVVIEDTSVTGRTGIYE 244
Query: 242 VLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
V+ V + + + A+EVQ ++ + + YG + VE A AV+TLL+ D
Sbjct: 245 VIKRGTVDRVYHENRVAKEVQLIEKVLENIAKNNGLVAYGLREVEEAANYGAVETLLVLD 304
Query: 302 DLFR 305
+L +
Sbjct: 305 ELLK 308
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 21/302 (6%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLKLEIKVEVVDYDKEG 64
P DDLW +I PGD V T R++ R + + ER + ++I+V V++ K
Sbjct: 20 PETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGEREPMWIQIEVTDVEFAKFA 79
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ G+ + + ++G HTL +E H + K L A D L +A + T + D+A
Sbjct: 80 NRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPDQA-DRLEEAVEATENPDVA 138
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
+ ++EG AH+ V + T R+ I ++ + Y + F+ L + LK D
Sbjct: 139 IATVEEGEAHVHTVAQYGTEERATITSTTGKGE------YARPRKELFDE-LASVLKRQD 191
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLD 244
V ++A PGFTK H E I + +I +V TS+ + EVL
Sbjct: 192 ---VDAYILAGPGFTKQDALDHFQDE--------IPDIAEQITVVDTSAVGDRGVHEVLK 240
Query: 245 APNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
V ++ + T+ A+E + + + + + YGP+ V A + A++TLL+ D+
Sbjct: 241 RGAVEDVQQQTRIAEEADYIDELMARIGS-GSEVAYGPEEVAKAADYGAIETLLVLDERL 299
Query: 305 RL 306
RL
Sbjct: 300 RL 301
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 20/302 (6%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW Y++I PGD V A T+RK ++ S + E + + L ++ E +++ K + +R
Sbjct: 21 DDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPVFLGVQAEKINFHKFANQVR 80
Query: 69 IRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVL 127
+ G + + E V +G +HT+ IE ++K W ++ L +A + A + +V+
Sbjct: 81 VTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEHHIERLKEAVAASKRARVMIVV 140
Query: 128 MQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALNKFFENVLQAFLKHV 183
+ +G A + LV R + I SI +H Y ES KFF +V + + +
Sbjct: 141 IDDGEADMALV-REYGV---EILNSI--RHNLGGKRYNTDRESEEMKFFHDVAKTMEEVM 194
Query: 184 DFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 243
V A++A PGF K+ F++ L ++ P E ++++ TS + + EV+
Sbjct: 195 KRENVEKAIVAGPGFVKEDFYKFL------KEKYP--ELAKKVVIEDTSVTGRTGIYEVI 246
Query: 244 DAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDL 303
V + ++ + A+EVQ ++ + + YG K VE A AV+TLL+ D+L
Sbjct: 247 KRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGLKEVEEAVNYGAVETLLVLDEL 306
Query: 304 FR 305
+
Sbjct: 307 LK 308
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 23/303 (7%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK--LKLEIKVEVVDYDKE 63
P DDLW ++I GD + A T R++ R VK L I+VE V +
Sbjct: 17 PETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFYLGIRVETVSFHIY 76
Query: 64 GSVLRIRGKNILE---NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 120
R+R ++E + V +G+ HTLE++L+ ++K+ W L L A + +
Sbjct: 77 TG--RLRATGVIERGPEDLVPMGSHHTLEVKLNTPLRIQKEHWSRWTLKRLRMAVRASKN 134
Query: 121 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA--LNKFFENVLQA 178
+++M++ +A + L+ + R I IP G I + +F+E+++++
Sbjct: 135 LKAIILVMEDDVAELGLIRQYGVEYRGPITGHIP---GKRIQQRDRGKLRREFYESIVES 191
Query: 179 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHS 238
K+ D + +IA PGF K F+ +L+ + P I K+ +L +T +G +
Sbjct: 192 LQKYGDLETI---IIAGPGFYKSDFYDYLM------ERYPEIAKKA--VLENTGTGGRAG 240
Query: 239 LREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLL 298
+ EVL V + + + A E++ + +F L DP YG V A AV+ LL
Sbjct: 241 ISEVLRKGTVERVSSEKRIASEIRNVNEFLEKLARDPDSVVYGKVEVMDAINMGAVEKLL 300
Query: 299 ITD 301
+ D
Sbjct: 301 VLD 303
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 150/311 (48%), Gaps = 22/311 (7%)
Query: 2 GLME--PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK--LEIKVEV 57
GL+E P DDLW +++ D V +T R++ + +R VK K L I+VE
Sbjct: 11 GLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRIQDNNSGKTRADRGVKKKFFLGIRVEK 70
Query: 58 VDYDKEGSVLRIRGKNILEN---EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 114
+++ K +LR G I+E+ + + +G+ HT+ ++L+ + ++K +W+ +L+ L+QA
Sbjct: 71 INFHKYTGMLRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKK-IWNKWSLERLNQA 127
Query: 115 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 174
+ + A+ +V +++ + ++ + I I K +N+++E+
Sbjct: 128 IEASNRANEIIVAIEDNTTELGIIKQYGIDYIGPIIGDISGKQNIE-KNRAQKVNEYYED 186
Query: 175 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 234
+ + + D + + +I PGFTK+ ++ +L E +L ++IL T +G
Sbjct: 187 ITKTLTQQKDIDKL---IIIGPGFTKNGYYNYL--EENYPKL------AKKVILESTGAG 235
Query: 235 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 294
++EVL + ++ KD K A+E + + YG K V A AV
Sbjct: 236 GHAGIQEVLKNGLIESLSKDAKIAKEAALVNKLLEQIGKSSNTVTYGKKQVITASNMGAV 295
Query: 295 QTLLITDDLFR 305
+ LL+ +DL R
Sbjct: 296 EKLLVLEDLVR 306
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 27/305 (8%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW Y++I+ GD V A T+RK ++ S E V + L IK E ++ + + LR
Sbjct: 21 DDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVFLGIKAEKINLHRFANQLR 80
Query: 69 IRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVL 127
I G I + E V +G +HTL +E ++K+ W + ++ L +A + + A + +V
Sbjct: 81 ITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYHIERLKEAIESSKKARVMIVA 140
Query: 128 MQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 180
+++G A I +V S+T S +I R + KFF V ++
Sbjct: 141 IEDGEAEIAIVREYGLDFVGSITYNISGKRYNIKR---------DDEEKKFFHEVAKSME 191
Query: 181 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 240
+ + + A++A PGF K+ F L R+ P E +++ TS G + +
Sbjct: 192 ELMKRENIEKAIVAGPGFYKENFVNFL------RENYP--ELAKKVVTDDTSMGGRTGIY 243
Query: 241 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLIT 300
EV+ V + +++ ++E++ ++ + + YG K VE A AV+TL++
Sbjct: 244 EVIKRGTVDKVYTESRISKEIKLVEKVIEEIAKNGL-VAYGLKEVEEATNYGAVETLIVL 302
Query: 301 DDLFR 305
D L +
Sbjct: 303 DSLLK 307
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 23/302 (7%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--AERVKLKLEIKVEVVDYDKE 63
P DDLW ++ PGD V T R++ R RD ER + + I V V++ K
Sbjct: 20 PETLDDLWHLTYVLEPGDLVAGDTTRRIQRD-DDKMRDTGGEREPMWIRIDVNNVEFAKF 78
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+ LR+ G + + ++G HT +E H + K +W L+ L +A + D+
Sbjct: 79 ANRLRVGGDIVDCSREDQLGFHHTFNVEEHDELTVEK-VWQVDQLERLEEAVEAAEQPDV 137
Query: 124 AVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHV 183
A+ ++EG AHI V + R+ I + + Y + ++ FE L A L+ +
Sbjct: 138 AIATVEEGQAHIHTVAQYGVEERASITGTTGKGE------YARSRDELFEE-LAAILRRL 190
Query: 184 DFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 243
D + ++A PGFTK H+ A P E +I +V T+S + EVL
Sbjct: 191 DAEAI---ILAGPGFTKQDALEHIEDNA------P--EAAEKIQVVDTASVGDRGVHEVL 239
Query: 244 DAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDL 303
V + +T+ ++E + + + + + +A YG V A E A++TLLI D+
Sbjct: 240 KRGAVDRIQTETRVSKEAELIDELMERI-GEGEKAAYGVDEVAEAAEFGAIETLLILDER 298
Query: 304 FR 305
R
Sbjct: 299 LR 300
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 31/304 (10%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK---LKLEIKVEVVDYDK 62
P DDLW +L++PGD V A T R V + A+ E+V+ ++L ++VE V++
Sbjct: 19 PESIDDLWHLQHLVSPGDLVFATTFRSV--EGATDKIRPEKVEKRPVRLGVRVEKVEFSH 76
Query: 63 EGSVLRIRGKNILENEHVKIGAFHTLEIEL-HRAFVLRKDLWDSLALDTLHQAADPTASA 121
G LRI G I+E+ + GA+HT+ +E + V+R+ W + L+ L +A +
Sbjct: 77 HGVRLRISG--IIEH-GMDTGAYHTINVETGYEISVIRR--WRPVDLERLDRAVKASVYG 131
Query: 122 DLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLK 181
+ ++ ++EG A + + + E+ I G G FF+ V+++ +
Sbjct: 132 VIHILTLEEGEAELF------RLRQYGPESVITITAGSGKGGETETRTGFFDTVIKSIAE 185
Query: 182 HVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLRE 241
V VIA PGF K+ F R+ A+ + P R I+ T + ++++
Sbjct: 186 -----VSGPMVIAGPGFVKEDFVRY----AKNKNCAP----AGRAIVAETRRIGRGAVQD 232
Query: 242 VLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
V+ A + +I D + ++EV+ + + ++ D A YG K V A E AV +L+ D
Sbjct: 233 VIGAGTLEKLIGDLQLSREVRLMDEVLLRISRDGAIA-YGYKDVATAIEYGAVDEVLLAD 291
Query: 302 DLFR 305
L R
Sbjct: 292 SLLR 295
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 23/304 (7%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQ--MASGSRDAERVKLKLEIKVEVVDYDKE 63
P + DDLW YN+I GD + AVT R+V + + R A+R K+ L I+V+ V++D+
Sbjct: 17 PENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKR-KMFLGIEVKNVEFDEN 75
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+RI G I + V +G+ HT+EI+ + K+ W ++ + +A + + +
Sbjct: 76 TKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKN-WKKWQIERIKEAIESSKRPKV 134
Query: 124 AVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE--SALNKFFENVLQAFLK 181
VV+M + A I V R +I E + H Y+ L K + + + L
Sbjct: 135 LVVVMDDEEADIFEV-RDYSIK----EICSIKSHTSKKLDYKINEELKKEYYHEIAKVLS 189
Query: 182 HVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLRE 241
D + + ++A PGF K+ F+ + ++ +L K++I++ S+ + L E
Sbjct: 190 EYDVDNI---LVAGPGFAKNSFYN--FISSQYPEL------KNKIVVESISTTSRAGLNE 238
Query: 242 VLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
V+ + + +++ A+E Q ++ + A YG V+ A E A+ TLL++D
Sbjct: 239 VIKRGIINRIYAESRVAKETQLIEKLLEEIAKKGL-AVYGIDEVKKALEYSAIDTLLVSD 297
Query: 302 DLFR 305
L R
Sbjct: 298 SLVR 301
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 15/299 (5%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK--LKLEIKVEVVDYDKE 63
P DDLW +++ GDSV + T R++ R VK L I VE + +
Sbjct: 17 PETLDDLWHLSHIVEVGDSVSSKTTRRIQDNTGDKLRSDRGVKKTFTLRIDVENITFHIF 76
Query: 64 GSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
LR+ G E + +G+ HT+E++L+ ++K+ W + AL L+QA + +
Sbjct: 77 TGKLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKWANWALKRLNQAIEASKKLA 136
Query: 123 LAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKH 182
+VL+++ A + L+ + I+ S+ K A+ +F+E V+++ K
Sbjct: 137 AIIVLLEDDTATLGLMRQFGIEYYGPIKGSVSGKR-IVDKNRSKAIAQFYEKVIESVNK- 194
Query: 183 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 242
F+ ++ V+A PGF K+ F+ ++ + + + IIE+ T SG + + EV
Sbjct: 195 --FHDIQNIVVAGPGFVKNDFYDYIKNKHKDLADKAIIES--------TGSGGRVGIHEV 244
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
L V + + + A E+ A+ + + + ++ YG K A AV+ LL+ D
Sbjct: 245 LKKGTVEKLTVENRVASEMVAINNLLEEIGKNSSKVAYGEKETVKAINLGAVKQLLVLD 303
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 36/304 (11%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEVVDYDKE 63
DDLW +I GD V A+T RK A + D E+VK++L I+VE +++ K
Sbjct: 23 DDLWHLKYIIEKGDMVFALTRRK-----ADSASDKLRPEKVEKVKVRLGIRVEELEFHKF 77
Query: 64 GSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LRI G EH + G++HTL +E+ + K+ W + L + A +
Sbjct: 78 ANRLRIHGPI----EHGMDTGSYHTLNVEIGTNISIIKEHWKNDQLQRIQDAEEAGKRPK 133
Query: 123 LAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLK 181
+ +V ++EG A I V S I S ++ E+ L N+FF +++
Sbjct: 134 VVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--------ETGLRNEFFREIVEQLRH 185
Query: 182 HVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLRE 241
V + VIA PGFTK+ F ++ + + E+ S I + SG++ E
Sbjct: 186 AVPEDA--SIVIAGPGFTKEDFLKYFNETESEMASKALTEDTSMIGM----SGFQ----E 235
Query: 242 VLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
VL V ++++++ A+E ++D ++ D +A YG V+ A AV+TLLI D
Sbjct: 236 VLRRGAVDRIMQESRIARESSLMEDLIREISMDG-KAAYGFADVKNALGYGAVETLLIAD 294
Query: 302 DLFR 305
+ R
Sbjct: 295 ETLR 298
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 23/303 (7%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSR--DAERVKLKLEIKVEVVDYDKE 63
P DDLW Y+++ GD V A+ R+V + A R ER + L ++VE V++DK
Sbjct: 17 PETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDKGERKPVYLGVRVEDVEFDKY 76
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+ LRI+G ++E+ + G+ HT+ + + + KD W+ L+ + +A L
Sbjct: 77 ANRLRIKG--VIEH-GPESGSHHTVNVTTGKRIKIVKDEWERKDLERIEEAEMSRPPVML 133
Query: 124 AVVLMQEGLAHILLVGRSMTI-TRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKH 182
V EG I+ R + +R+ ++P K G + + KFF + +
Sbjct: 134 VAVDTGEGTIGIV---RDYGLDVVARVRHNVPGKRG---GDRRAEMRKFFHRLADEIERI 187
Query: 183 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 242
+ V V+ PGF K F L E R + +E+ T S + L E+
Sbjct: 188 AEEEGVEHIVVGGPGFVKSDFAEFL---REERDIPAHVED--------TGSAGEAGLIEM 236
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
+ V +++++ A+EV+ L++ F + + YG + A E A+ LL+ D+
Sbjct: 237 IRRGAVERAVEESRVAEEVKHLEEVFKRIGKGDDKVAYGVRECLKAAEFGAIDVLLVADE 296
Query: 303 LFR 305
FR
Sbjct: 297 KFR 299
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 34/303 (11%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEVVDYDKE 63
DDLW +I GD V +VT RK A + D E+VK++L I+V+ +++ K
Sbjct: 23 DDLWHLKYIIEKGDLVFSVTKRK-----ADSASDKIRPEKVEKVKVRLGIRVDDLEFHKF 77
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+ LR+ G + + +G++HTL IE+ + K+ W + L + A + + +
Sbjct: 78 ANRLRLHG---MIERGMDVGSYHTLNIEIGTNLSVIKEHWKNDQLQRIKDAEEASKRPKV 134
Query: 124 AVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLKH 182
+V ++EG A I V S I S ++ E+ L N+FF V++
Sbjct: 135 VMVAIEEGDADIGFVHHYGIEIYSHIRQSSGKR--------ETGLRNEFFREVVEQLRHA 186
Query: 183 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 242
V VIA PGFTK+ F ++ + +IE+ S I + SG++ EV
Sbjct: 187 VPEEA--SIVIAGPGFTKEDFIKYFQETEPAMASKALIEDTSMIGM----SGFQ----EV 236
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
L V ++++++ A+E ++D ++ D +A YG V+ A AV+TLL+ D+
Sbjct: 237 LRRGAVDRIMQESRIARESALMEDLIREISMDG-KAAYGLGDVKNALNFGAVETLLVADE 295
Query: 303 LFR 305
R
Sbjct: 296 TLR 298
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 36/304 (11%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEVVDYDKE 63
DDLW +I GD V A+T RK A + D E+VK++L I+VE +++ K
Sbjct: 23 DDLWHLKYIIEKGDLVFALTKRK-----ADSASDKLRPEKVEKVKVRLGIRVEEMEFHKF 77
Query: 64 GSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LRI G EH + +G++HTL +E+ + K+ W + L + A +
Sbjct: 78 ANRLRIHGPI----EHGMDVGSYHTLNVEIGTNISIIKERWKNDQLQRIQDAEEAGKRPK 133
Query: 123 LAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLK 181
+ +V ++EG A I V S I S ++ E+ L ++FF ++
Sbjct: 134 VVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--------ENGLRSEFFREIVDQLRH 185
Query: 182 HVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLRE 241
V + VIA PGFTK+ F ++ + + E+ S I + SG++ E
Sbjct: 186 AVPEDA--SIVIAGPGFTKEDFLKYFHETEPEMASKALTEDTSMIGM----SGFQ----E 235
Query: 242 VLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 301
VL V ++++++ A+E ++D ++ D +A YG V+ A + AV+TLLI D
Sbjct: 236 VLRRGAVDRIMQESRIARESSLMEDLLREISMD-GKAAYGFADVKNALKYGAVETLLIAD 294
Query: 302 DLFR 305
+ R
Sbjct: 295 ETLR 298
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 29/305 (9%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD--AERVKLKLEIKVEVVDY 60
P + DDLW +++ PGD V T R++ R QM RD +R L + ++V+ V++
Sbjct: 20 PENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQM----RDTGGQREHLFVTLQVDEVEF 75
Query: 61 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 120
+ + LR+ G + + ++ A HT+ +E H + K + + L +A + +
Sbjct: 76 ARFANRLRVSGVIVGCSREDQLNAHHTINVEEHDEITVEKH-FKPDQTERLEEATEAAEN 134
Query: 121 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 180
D+A+ ++EG A++ V + T + + P G Y + F + +A L
Sbjct: 135 PDVAIATVEEGAAYVHTVQQYGTEEYASF--TKPTGKGD----YSRPREELFAELGEA-L 187
Query: 181 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 240
H+D + V ++A PGFTK ++ E R L RI V TS+ +
Sbjct: 188 AHLDADAV---ILAGPGFTKQDALDYIT--EEYRDL------ADRITTVDTSAAGDRGVH 236
Query: 241 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLIT 300
EVL V + K+T+ ++E + D + +A YGP+ V A E A++TLL+
Sbjct: 237 EVLKRGAVDEVQKETRISKEATLIDDLTAEIAQ-GAKATYGPEDVAEAAEFGAIETLLVV 295
Query: 301 DDLFR 305
DD R
Sbjct: 296 DDRLR 300
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 44/308 (14%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEVVDYDKE 63
DDLW +L++PGD V A T RK+ SG+ D AER ++L I VE V++
Sbjct: 23 DDLWHLKHLVSPGDLVFATTQRKI-----SGATDKLRPEKAERRTVRLGISVEAVEFHTY 77
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADL 123
+ LRI G + V IG++HTL IE + K W L + +A + +
Sbjct: 78 SNWLRIHG---VIKSGVDIGSYHTLNIEAGSELSIIK-RWRPDELQRIEEAVAESNRPRV 133
Query: 124 AVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHV 183
+ L++EG A I ++ + T + I + +V FLK V
Sbjct: 134 VLALVEEGEATIGVLRQFGVQTVAEIRG--------------GSGKGSGSSVRDDFLKEV 179
Query: 184 DFNVVRCA------VIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 237
+ A V+A PGFTK+ + ++EA L R+ + SS +
Sbjct: 180 ADQIANSAGDDAYVVLAGPGFTKEDLRK--VMEARYPDL------LKRLTMDDASSTGRS 231
Query: 238 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 297
+EVL V +++ ++ ++E + + D + D RA YG + V A A++TL
Sbjct: 232 GFQEVLRRGTVDRIVEASRISRETRLMDDLMKEIATD-GRAAYGIREVREAANYGAIETL 290
Query: 298 LITDDLFR 305
+I D L R
Sbjct: 291 MIVDQLVR 298
>sp|Q4JCI0|PELO_SULAC Protein pelota homolog OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pelA PE=3 SV=1
Length = 342
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 137/296 (46%), Gaps = 25/296 (8%)
Query: 8 DSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVL 67
+ DDLW + +I GD ++A T R + S +D+ R+ + +E++VE ++ + L
Sbjct: 19 NEDDLWLLHIIIKKGDRIVAKTTRDI-----SMGKDSRRIPMTIELQVEYTEFQNFTTRL 73
Query: 68 RIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVV 126
RI G + E I GA HT+ +++ ++ K+ W + L+ + + + +A+V
Sbjct: 74 RIHGLILDAPERFGIKGAHHTVNLDIGDEVIIIKEQWSNYELEKIREQEEKKGKLLIALV 133
Query: 127 LMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFN 186
+ E + +L+ + ++T P K + N+ E + + V
Sbjct: 134 DVDEYIIALLMKQGVKILAEKSLQT--PGKDNDVV-------NENIEEMANEIISFVKLT 184
Query: 187 VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAP 246
V +IA PG KD ++ + +Q I+NK + + SS + L E+L
Sbjct: 185 GVNVIIIAGPGPFKDMVNQKI------KQ----IDNKLIVYVDSVSSASRAGLNELLRRD 234
Query: 247 NVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
+ + ++ + AQ+++ L+ L + YG + ++ A+E AV LLIT+D
Sbjct: 235 IIDQVYREFEIAQQLKILESIMENLAKNTGLVVYGIEDIKKANELGAVDKLLITED 290
>sp|A6VI74|PELO_METM7 Protein pelota homolog OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pelA PE=3 SV=1
Length = 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 18/301 (5%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDYDKEG 64
P + DDLW N+I P +++ AVT R+ + D + K+ L IK E +++ ++
Sbjct: 17 PENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRKVFLGIKAEKINFHEDF 76
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ GK I E + IG++HT++IE ++K+ W L L A D + +
Sbjct: 77 NRLRVSGKIIHAPEDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKKPKVV 135
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
VV+M + A I LV + I++ + +K E A ++ +++ + + +
Sbjct: 136 VVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINS-ISEFE 192
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLD 244
+ + A PGF K+ + + + + L P +++ + K L E+L
Sbjct: 193 GKI----LFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHTGKSGLSEILK 240
Query: 245 APNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ + + + + ++E Q ++ ++ A YG + V A A+ TLL+TD+
Sbjct: 241 SGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVNNAMNYSAIDTLLLTDEYL 299
Query: 305 R 305
R
Sbjct: 300 R 300
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 18/301 (5%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDYDKEG 64
P + DDLW N+I ++V A+T R+ + D + ++ L +K E + +D+
Sbjct: 17 PENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGTKRRVYLGVKAEKIKFDENT 76
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ G I E V IG++HT++IE + ++K+ W L L A + +
Sbjct: 77 NRLRVSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQKN-WKKWDLQRLKDAENSAKKPKII 135
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
VV+M + A + ++ I++ + +K E+ ++ +L+ +
Sbjct: 136 VVIMDDSDATVFIIRDYGVKEIGHIKSRLSKKLDYKRQDQENI--NYYNEILEVMSPYEG 193
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLD 244
++A PGFTK+ F ++ L E + L+ R++ T+ + L EVL
Sbjct: 194 -----KILVAGPGFTKNNFQKY-LSEKHKDMLQ-------RVVFESTNHTGRLGLAEVLK 240
Query: 245 APNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ V + + + ++E Q + ++ A YG V+ A A++TLLITD+
Sbjct: 241 SGIVDRIYGEARLSKETQLVNKLLEEISKKGL-AVYGVDDVKNALNYSAIETLLITDEFL 299
Query: 305 R 305
R
Sbjct: 300 R 300
>sp|A9A8K6|PELO_METM6 Protein pelota homolog OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pelA PE=3 SV=1
Length = 348
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 142/303 (46%), Gaps = 22/303 (7%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDYDKEG 64
P + DDLW N+I P +++ AVT R+ + D + ++ L IK E +++ ++
Sbjct: 17 PENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINFHEDF 76
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ GK I + + IG++HT++IE ++K+ W L L A D + +
Sbjct: 77 NRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKKPKVV 135
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
VV+M + A I LV + I++ I +K E A ++ +++ + ++
Sbjct: 136 VVIMDDSEADIFLVREFGIKELASIKSGISKKLD--YKQNEQAKFSYYSDIINSISEYEG 193
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP--IIENKSRIILVHTSSGYKHSLREV 242
+ A PGF K+ + + + + L P +IE+ + HT K L E+
Sbjct: 194 -----KILFAGPGFGKNNIQNY--ISEKHKDLAPNVVIESAN-----HTG---KSGLSEI 238
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
L + + + + + ++E Q ++ ++ A YG + V A A+ TLL+TD+
Sbjct: 239 LKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVSNAMNYSAIDTLLLTDE 297
Query: 303 LFR 305
R
Sbjct: 298 YLR 300
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 43/310 (13%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEVVD 59
P +SDDLW +NLI PG V A T+R V GS+D E+ ++L I+VE V+
Sbjct: 19 PENSDDLWHLHNLITPGSLVYATTLRSV-----EGSQDKIRPEKQEKRPVRLGIRVEDVE 73
Query: 60 YDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTA 119
+ + LR+ G +E+ V IG+ HTL +E + K W L+ + +A +
Sbjct: 74 FHEYSIRLRVFG--TIES-GVDIGSHHTLNLEPGYEISVIKS-WSGSDLERIDRAIKGST 129
Query: 120 SADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY-ESALNKFFENVLQA 178
S + ++ ++EG A + R+++ P++ AG ++A E +A
Sbjct: 130 SEAIHILTVEEGEAELY-----------RVQSYGPKQVWSLAAGSGKTAEVSSREEFSEA 178
Query: 179 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR---IILVHTSSGY 235
+ V + VIA PGF K++ ++ + +R+ N SR +++ T +G
Sbjct: 179 VVSQVS-QLTGPLVIAGPGFVKEE----IIAKFKRK-------NPSRSAPLVIGDTRAGG 226
Query: 236 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 295
+ +++EV+ + + D + A+EV L + + D A YG V A AVQ
Sbjct: 227 RRAVQEVIGQGILEKLNGDLQLAREVTCLDELMRRIGKDEPVA-YGIDAVRDATGCGAVQ 285
Query: 296 TLLITDDLFR 305
TL++ D L R
Sbjct: 286 TLMVVDTLLR 295
>sp|Q9HJ74|PELO_THEAC Protein pelota homolog OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pelA PE=1 SV=1
Length = 339
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 25/297 (8%)
Query: 10 DDLWFAYNLIAPGDSVMAVTVRKVLRQM-ASGSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW+ N+++ GD V A+T R+V SR+ ER+ + + +KVE +++ + LR
Sbjct: 21 DDLWYLRNILSEGDEVSAITFRRVEESADVQRSRERERIPITIRLKVEKIEFQDFDNRLR 80
Query: 69 IRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLM 128
I G I E K G ++ + + + K+ WD +D L +A D V M
Sbjct: 81 ILGTVIEGPEDTK-GKHQSITVTVDSEISITKE-WDDQHIDLLKEATDEKYVTVYTAVAM 138
Query: 129 QEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVV 188
E A I L+ ++ T + G G S + +F+ ++ A LK N
Sbjct: 139 DEDEAQIFLI---HPYGIQQVGTVYSGRSGKYAEGNYSEAS-YFDQIVNA-LK----NYS 189
Query: 189 RCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNV 248
+I PGF +D+F R+ +R + I + T SG ++ E + + +
Sbjct: 190 NSIIILGPGFARDRFARY----CAQRGVNVIGSFPAN----RTDSG---AVYEFITSADG 238
Query: 249 MNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 305
++ + + A++ + + +F + D YG E A + A+ L+ITD++FR
Sbjct: 239 AKLLSNERIARDKEIVDEFLVAVKKDM--GVYGRDQTESALQMGALSDLIITDEMFR 293
>sp|B8D691|PELO_DESK1 Protein pelota homolog OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=pelA PE=3 SV=1
Length = 356
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 38/307 (12%)
Query: 8 DSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVL 67
D DDLW + ++ GD V A T R+V SR R+ + L ++VE +++ + L
Sbjct: 19 DIDDLWILFMVLRKGDIVYARTSREVKPGEGGSSR---RIPMVLGLRVEAIEFQEFTEKL 75
Query: 68 RIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQA---------ADP 117
RIRG + E + G +HT+ I + + ++ W +LD L + +
Sbjct: 76 RIRGIVVEGPEEFGVKGHYHTIAIGVGDQLAIVRETWSKHSLDILKKGVRRRRILLVSID 135
Query: 118 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 177
SA +AV L ++G+ H S I++ +P K +E L+++ V
Sbjct: 136 YDSACIAV-LTEQGVKH-----------HSEIQSDLPGKM--YRVEHEEILDEYLSKVAS 181
Query: 178 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 237
A + + +IA PG K++ ++ RR +N+ + L TS+G
Sbjct: 182 ALNNVIQQEEIDAVIIAGPGDLKNKLGENI-----RR------DNRKHVYLDTTSTGGCQ 230
Query: 238 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 297
+ E+L V ++ D + + +++F ++ DP YG V A AV +
Sbjct: 231 GISELLGRDVVKQVVGDLSIVKAKEVVEEFKRLIIKDPQLVAYGVDDVYGAVVYAAVSRI 290
Query: 298 LITDDLF 304
++ DL
Sbjct: 291 VVAGDLL 297
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 139/305 (45%), Gaps = 26/305 (8%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDYDKEG 64
P + DDLW N+I P +++ AVT R+ + D + ++ L IK E +++ ++
Sbjct: 17 PENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINFHEDF 76
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ GK I + + IG++HT++IE ++K+ W L L +A D + +
Sbjct: 77 NRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLVRLKEAEDSSKKPKVV 135
Query: 125 VVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 180
VV++ + A I LV + + +S + + K E A ++ +++ +
Sbjct: 136 VVILDDSEADIFLVREFGIKELVSIKSGVSKKLDYKQN------EQAKFSYYSDIINSIS 189
Query: 181 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 240
+ + A PGF K+ + + + + L P +++ + K L
Sbjct: 190 EFEG-----KILFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHTGKSGLS 236
Query: 241 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLIT 300
E+L + + + + + ++E Q ++ ++ A YG + V A A+ TLL+T
Sbjct: 237 EILKSGIIDKIYGEARISKETQVIEKLLEEISKKGL-AAYGIESVNNAMNYSAIDTLLLT 295
Query: 301 DDLFR 305
D+ R
Sbjct: 296 DEYLR 300
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 38/311 (12%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRDAERVKLKLEIKVEVVDYDK 62
P DDLW ++ PGD V T R++ R QM ER + + I V V++ K
Sbjct: 20 PESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG--GEREHMFVTIDVGDVEFHK 77
Query: 63 EGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LR+ G + ++G HTL + + K W L+ L++A + T D
Sbjct: 78 FSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-WQPDQLNRLNEAVEATDQPD 136
Query: 123 LAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 175
+A+ ++EG AHI +V + S T T + E + + ++ F +
Sbjct: 137 VAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN------------DRGRDELFGTL 184
Query: 176 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 235
A + ++A PGFTK H+ E P ++ I +V TS+
Sbjct: 185 ADALARM----QADAIILAGPGFTKQDALDHITEEY------PDLQET--ITMVDTSAVG 232
Query: 236 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 295
+ EVL V ++ ++T+ A+E + + + + D +A YG V+ A E AV+
Sbjct: 233 GRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG-KAAYGIDEVQKAVEFGAVE 291
Query: 296 TLLITDDLFRL 306
LLI D+ RL
Sbjct: 292 DLLILDERLRL 302
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 38/311 (12%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRDAERVKLKLEIKVEVVDYDK 62
P DDLW ++ PGD V T R++ R QM ER + + I V V++ K
Sbjct: 20 PESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG--GEREHMFVTIDVGDVEFHK 77
Query: 63 EGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LR+ G + ++G HTL + + K W L+ L++A + T D
Sbjct: 78 FSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-WQPDQLNRLNEAVEATDQPD 136
Query: 123 LAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 175
+A+ ++EG AHI +V + S T T + E + + ++ F +
Sbjct: 137 VAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN------------DRGRDELFGTL 184
Query: 176 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 235
A + ++A PGFTK H+ E P ++ I +V TS+
Sbjct: 185 ADALARM----QADAIILAGPGFTKQDALDHITEEY------PDLQET--ITMVDTSAVG 232
Query: 236 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 295
+ EVL V ++ ++T+ A+E + + + + D +A YG V+ A E AV+
Sbjct: 233 GRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG-KAAYGIDEVQKAVEFGAVE 291
Query: 296 TLLITDDLFRL 306
LLI D+ RL
Sbjct: 292 DLLILDERLRL 302
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 140/301 (46%), Gaps = 18/301 (5%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDYDKEG 64
P + DDLW ++I P +++ AVT R+ + D + ++ L IK E +++ ++
Sbjct: 17 PENLDDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINFHEDF 76
Query: 65 SVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 124
+ LR+ GK I + + IG++HT++IE ++K+ W ++ L +A D + +
Sbjct: 77 NRLRVSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQKN-WKKWDIERLKEAEDSSKKPKVV 135
Query: 125 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVD 184
VV+M + A I LV + I++ + +K E A ++ +++ + +
Sbjct: 136 VVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINSISEFEG 193
Query: 185 FNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLD 244
+ A PGF ++ + + + + L P +++ + K L E+L
Sbjct: 194 -----KILFAGPGFGRNNIQNY--ISEKYKSLAP------NVVVESANHTGKSGLSEILK 240
Query: 245 APNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ + + + + ++E Q ++ ++ A YG + V A A+ TLL+TD+
Sbjct: 241 SGIIDKIYGEARISKETQVVEKLLEEISKKGL-AAYGIESVNNAMNFSAIDTLLLTDEYL 299
Query: 305 R 305
R
Sbjct: 300 R 300
>sp|Q12W71|PELO_METBU Protein pelota homolog OS=Methanococcoides burtonii (strain DSM
6242) GN=pelA PE=3 SV=1
Length = 347
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 33/309 (10%)
Query: 4 MEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEIKVEV 57
+ P DDLW +I GD V ++T RK A + D AE+ ++L ++VE
Sbjct: 18 LTPETLDDLWHLKYIIEKGDLVFSLTKRK-----ADNAADKLRPEKAEKKTVRLGVRVED 72
Query: 58 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 117
V++ K + LR+ G L + G +HTL IE + K W L+ +++A
Sbjct: 73 VEFHKFSNRLRVHG---LIEHGMDAGFYHTLNIEDGTNLSITK-YWKKDQLERVNEAEAA 128
Query: 118 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 177
+ + +V ++EG A I V R I I + I + G E L + F + +
Sbjct: 129 SKRPKVILVAIEEGDADIGFV-RHYGI---EIYSHITQSSGKG----EGTLREVFFSTIL 180
Query: 178 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 237
L H + V++ PGFTKD F ++ + ++E+ S I + SG++
Sbjct: 181 DQLTHA-MSGTESVVVSGPGFTKDDFMKYASSKNSDLVAGILVEDTSSIGM----SGFQ- 234
Query: 238 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 297
EVL V ++++++ A+E + + D + YG V+ A + AV+TL
Sbjct: 235 ---EVLRRGAVDRIMEESRIARESSLMDSLLKEIALDG-KVAYGMDEVKQAIDFGAVETL 290
Query: 298 LITDDLFRL 306
L+ D++ RL
Sbjct: 291 LVADEMLRL 299
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pelA PE=3 SV=1
Length = 355
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 29/305 (9%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--AERVKLKLEIKVEVVDYDKE 63
P + DDLW +++ PGD V T R++ R + RD +R L + I+V V++ +
Sbjct: 20 PENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDEN-LRDTGGQREHLVVTIEVADVEFARF 78
Query: 64 GSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDT---LHQAADPTAS 120
+ LR+ G+ I + ++G +HTL +E H ++ K A D + A + +
Sbjct: 79 ANRLRVGGEIISCSREDELGHYHTLNVESHDEIIVTK----KFAPDQRKRIEAAEEAAEN 134
Query: 121 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 180
AD+AV ++EG AHI T+ + E R Y + F A L
Sbjct: 135 ADVAVATIEEGEAHI------HTVAQYGTEEQFSRTATTGKGEYSQPRTELFAE-FAAAL 187
Query: 181 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 240
+D + + ++A PGFTK ++ + P I +K + +V T++ +
Sbjct: 188 SRMDVDAI---ILAGPGFTKQDAEEYI------QSNNPEIIDK--LTIVDTAAVGDRGVH 236
Query: 241 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLIT 300
EVL V + T+ + E + + + + + YG V A E AV LL+
Sbjct: 237 EVLKRGAVDEVQTQTRISAEAELIDELMEGIAT-GEKIAYGIDEVAKAAEFGAVDDLLVV 295
Query: 301 DDLFR 305
DD R
Sbjct: 296 DDQLR 300
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 135/303 (44%), Gaps = 29/303 (9%)
Query: 6 PVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK---LKLEIKVEVVDYDK 62
P DDLW +L+ PGD V A T R V + A+ E+V+ ++L I VE V++ +
Sbjct: 19 PETLDDLWHLSHLVGPGDLVFATTFRSV--EAATDKLRPEKVEKRPVRLGIWVEKVEFHQ 76
Query: 63 EGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASAD 122
+ LRI G I+E+ V + A HTL +E + K W + + + +A D +A
Sbjct: 77 HTNRLRIAG--IIES-GVDVAAHHTLNVEAGFEISVVKR-WRPVDCERIRRAVDASAYGV 132
Query: 123 LAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKH 182
+ VV ++EG A I R + T A G SAL FE L
Sbjct: 133 VHVVSVEEGEAQIY---RLRQFGPEWVTTVTAGSSKGADTGTRSAL---FEKTLDTVAA- 185
Query: 183 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 242
V V+A PGF KD+F ++ + A + R++ V T + +++EV
Sbjct: 186 ----VTGPLVVAGPGFVKDEFAEYVKVRAP--------DLAGRMVAVETRRIGRGAVQEV 233
Query: 243 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 302
+ + ++ D A+EV + + + + A YG V A A +T+L+ D
Sbjct: 234 IGQGILDRLLGDLHLAREVALMDEVLVRIATEGAVA-YGIDEVRKAVAYGAAETVLVADT 292
Query: 303 LFR 305
L R
Sbjct: 293 LLR 295
>sp|C3N8Q8|PELO_SULIY Protein pelota homolog OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=pelA PE=3 SV=1
Length = 344
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 9 SDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW + ++ GD V+A T R + +++ R+ + + +KV+ ++ + + LR
Sbjct: 20 EDDLWILHLILEKGDKVVAKTTRDI-----GLGKESRRIPMTIVLKVDYTEFQEFTNRLR 74
Query: 69 IRGKNILEN--EHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
I G I+E+ E I GA HT+ +++ ++ K W+ ALD L + AD + +A+
Sbjct: 75 IHG--IIEDAPERFGIRGAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIAL 132
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V E L I + + I + S+ + G ++AL E L ++K +
Sbjct: 133 VDFDEYLIAIPF-EQGIKILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNP 186
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+ + ++A PGF K++ + ++ I++NK ++ + SS + L E+L
Sbjct: 187 DAI---LLAGPGFFKEEVAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKR 233
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ ++ D + A + ++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 234 DIIDKIMSDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|C3NMR0|PELO_SULIN Protein pelota homolog OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=pelA PE=3 SV=1
Length = 344
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 9 SDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW + ++ GD V+A T R + +++ R+ + + +KV+ ++ + + LR
Sbjct: 20 EDDLWILHLILEKGDKVVAKTTRDI-----GLGKESRRIPMTIVLKVDYTEFQEFTNRLR 74
Query: 69 IRGKNILEN--EHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
I G I+E+ E I GA HT+ +++ ++ K W+ ALD L + AD + +A+
Sbjct: 75 IHG--IIEDAPERFGIRGAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIAL 132
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V E L I + + I + S+ + G ++AL E L ++K +
Sbjct: 133 VDFDEYLIAIPF-EQGIKILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNP 186
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+ + ++A PGF K++ + ++ I++NK ++ + SS + L E+L
Sbjct: 187 DAI---LLAGPGFFKEEVAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKR 233
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ ++ D + A + ++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 234 DIIDKIMSDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|C3MJN7|PELO_SULIL Protein pelota homolog OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=pelA PE=3 SV=1
Length = 344
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 9 SDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKVEVVDYDKEGSVLR 68
DDLW + ++ GD V+A T R + +++ R+ + + +KV+ ++ + + LR
Sbjct: 20 EDDLWILHLILEKGDKVVAKTTRDI-----GLGKESRRIPMTIVLKVDYTEFQEFTNRLR 74
Query: 69 IRGKNILEN--EHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 125
I G I+E+ E I GA HT+ +++ ++ K W+ ALD L + AD + +A+
Sbjct: 75 IHG--IIEDAPERFGIRGAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIAL 132
Query: 126 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 185
V E L I + + I + S+ + G ++AL E L ++K +
Sbjct: 133 VDFDEYLIAIPF-EQGIKILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNP 186
Query: 186 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 245
+ + ++A PGF K++ + ++ I++NK ++ + SS + L E+L
Sbjct: 187 DAI---LLAGPGFFKEEVAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKR 233
Query: 246 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 304
+ ++ D + A + ++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 234 DIIDKIMSDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,975,991
Number of Sequences: 539616
Number of extensions: 4169013
Number of successful extensions: 11413
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 11171
Number of HSP's gapped (non-prelim): 115
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)