Query 021568
Match_columns 311
No_of_seqs 119 out of 1306
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02752 [acyl-carrier protein 100.0 1.8E-59 3.9E-64 420.6 36.9 308 2-309 34-341 (343)
2 COG0331 FabD (acyl-carrier-pro 100.0 1.3E-59 2.8E-64 407.6 29.8 296 6-309 2-298 (310)
3 TIGR00128 fabD malonyl CoA-acy 100.0 2.5E-56 5.4E-61 393.0 35.9 286 8-303 3-289 (290)
4 PF00698 Acyl_transf_1: Acyl t 100.0 4.7E-57 1E-61 401.6 28.5 275 9-302 1-281 (318)
5 TIGR03131 malonate_mdcH malona 100.0 5.1E-55 1.1E-59 385.1 34.8 284 8-309 1-284 (295)
6 smart00827 PKS_AT Acyl transfe 100.0 2.4E-52 5.2E-57 369.0 32.4 278 12-305 1-287 (298)
7 KOG2926 Malonyl-CoA:ACP transa 100.0 9.3E-51 2E-55 341.8 22.6 300 5-306 61-365 (386)
8 TIGR02813 omega_3_PfaA polyket 100.0 2E-48 4.3E-53 409.4 33.6 287 5-305 578-884 (2582)
9 TIGR02816 pfaB_fam PfaB family 100.0 6.5E-45 1.4E-49 336.2 28.6 274 5-304 180-490 (538)
10 COG3321 Polyketide synthase mo 100.0 3.2E-36 6.9E-41 300.6 22.9 282 7-304 526-813 (1061)
11 KOG1202 Animal-type fatty acid 100.0 2.6E-36 5.7E-41 285.8 16.9 280 4-303 497-786 (2376)
12 cd07198 Patatin Patatin-like p 91.7 1.2 2.6E-05 35.7 8.0 49 69-123 9-57 (172)
13 cd07223 Pat_PNPLA5-mammals Pat 90.7 6 0.00013 36.0 11.9 64 65-130 16-79 (405)
14 cd07205 Pat_PNPLA6_PNPLA7_NTE1 88.9 1.5 3.2E-05 35.2 6.4 48 70-123 12-59 (175)
15 cd07207 Pat_ExoU_VipD_like Exo 87.6 1.9 4.1E-05 35.1 6.4 48 70-123 11-58 (194)
16 cd07210 Pat_hypo_W_succinogene 87.2 2.2 4.8E-05 35.8 6.6 48 70-123 12-59 (221)
17 cd07219 Pat_PNPLA1 Patatin-lik 86.3 4.8 0.0001 36.6 8.4 56 66-123 20-75 (382)
18 cd07209 Pat_hypo_Ecoli_Z1214_l 85.9 2.2 4.8E-05 35.6 5.9 39 70-114 10-48 (215)
19 cd07227 Pat_Fungal_NTE1 Fungal 85.6 2.7 5.8E-05 36.5 6.4 47 70-122 22-68 (269)
20 cd07224 Pat_like Patatin-like 85.5 5.1 0.00011 33.9 8.0 56 67-126 8-63 (233)
21 COG1752 RssA Predicted esteras 84.3 3.3 7.1E-05 36.7 6.5 48 70-123 23-70 (306)
22 cd07225 Pat_PNPLA6_PNPLA7 Pata 84.1 3.4 7.4E-05 36.6 6.5 48 70-123 27-74 (306)
23 cd07228 Pat_NTE_like_bacteria 84.1 3.5 7.6E-05 33.1 6.1 46 70-121 12-57 (175)
24 cd07220 Pat_PNPLA2 Patatin-lik 83.4 7.2 0.00016 33.4 8.0 57 67-125 13-69 (249)
25 cd07204 Pat_PNPLA_like Patatin 83.2 6.8 0.00015 33.4 7.8 55 68-124 9-63 (243)
26 cd07229 Pat_TGL3_like Triacylg 82.9 4 8.6E-05 37.4 6.5 49 68-123 93-141 (391)
27 cd07218 Pat_iPLA2 Calcium-inde 82.2 6.2 0.00014 33.7 7.2 52 68-123 10-61 (245)
28 cd07221 Pat_PNPLA3 Patatin-lik 81.3 6.1 0.00013 34.0 6.8 54 69-124 11-64 (252)
29 cd07212 Pat_PNPLA9 Patatin-lik 77.6 9 0.0002 34.1 6.9 54 72-126 13-66 (312)
30 cd07231 Pat_SDP1-like Sugar-De 75.9 10 0.00022 33.7 6.6 48 68-122 78-125 (323)
31 PRK10279 hypothetical protein; 75.8 4.7 0.0001 35.6 4.5 37 70-112 17-54 (300)
32 cd07222 Pat_PNPLA4 Patatin-lik 74.4 17 0.00036 31.1 7.5 42 68-111 9-50 (246)
33 PF09752 DUF2048: Uncharacteri 70.9 12 0.00027 33.5 6.0 99 4-112 90-195 (348)
34 cd07230 Pat_TGL4-5_like Triacy 70.8 12 0.00025 34.9 6.1 46 70-122 85-130 (421)
35 cd07213 Pat17_PNPLA8_PNPLA9_li 70.6 14 0.00029 32.4 6.3 54 71-126 15-68 (288)
36 cd07232 Pat_PLPL Patain-like p 69.5 13 0.00028 34.4 6.1 46 71-123 80-125 (407)
37 cd07211 Pat_PNPLA8 Patatin-lik 67.2 23 0.00049 31.3 7.0 58 71-129 21-79 (308)
38 PRK11126 2-succinyl-6-hydroxy- 66.5 7.2 0.00016 32.6 3.6 31 77-113 57-87 (242)
39 cd07208 Pat_hypo_Ecoli_yjju_li 66.3 11 0.00024 32.4 4.8 39 70-114 10-49 (266)
40 cd07199 Pat17_PNPLA8_PNPLA9_li 61.4 34 0.00074 29.3 6.9 56 71-127 12-70 (258)
41 TIGR03695 menH_SHCHC 2-succiny 61.2 30 0.00065 28.2 6.4 21 92-112 70-90 (251)
42 TIGR02427 protocat_pcaD 3-oxoa 61.0 28 0.00061 28.5 6.2 21 92-112 79-99 (251)
43 cd07206 Pat_TGL3-4-5_SDP1 Tria 59.4 25 0.00053 31.0 5.6 39 68-112 79-117 (298)
44 PLN02894 hydrolase, alpha/beta 55.2 65 0.0014 29.7 8.0 20 92-111 176-195 (402)
45 PF03958 Secretin_N: Bacterial 54.9 48 0.001 22.4 5.5 33 166-198 44-76 (82)
46 TIGR02240 PHA_depoly_arom poly 54.7 16 0.00034 31.4 3.7 20 92-111 91-110 (276)
47 PLN02824 hydrolase, alpha/beta 54.0 16 0.00036 31.6 3.8 30 76-111 92-121 (294)
48 PF06821 Ser_hydrolase: Serine 53.5 12 0.00026 30.0 2.5 19 92-110 55-73 (171)
49 PRK10985 putative hydrolase; P 51.8 46 0.00099 29.5 6.3 16 92-107 131-146 (324)
50 TIGR03056 bchO_mg_che_rel puta 51.5 15 0.00033 31.1 3.1 28 78-111 87-114 (278)
51 PRK13604 luxD acyl transferase 50.8 23 0.0005 31.4 4.0 20 92-111 108-127 (307)
52 PF12697 Abhydrolase_6: Alpha/ 50.4 25 0.00054 28.2 4.1 28 77-110 57-84 (228)
53 PRK00870 haloalkane dehalogena 49.7 21 0.00046 31.1 3.8 28 77-110 106-133 (302)
54 PRK11071 esterase YqiA; Provis 48.1 26 0.00056 28.5 3.8 20 92-111 61-80 (190)
55 PRK03592 haloalkane dehalogena 48.0 24 0.00051 30.6 3.8 29 77-111 84-112 (295)
56 PLN02965 Probable pheophorbida 47.5 21 0.00045 30.2 3.3 19 92-110 72-90 (255)
57 TIGR03101 hydr2_PEP hydrolase, 45.5 32 0.0007 29.8 4.1 28 77-110 90-117 (266)
58 PF01764 Lipase_3: Lipase (cla 44.9 17 0.00037 27.4 2.1 17 94-110 66-82 (140)
59 cd07217 Pat17_PNPLA8_PNPLA9_li 44.7 36 0.00078 30.7 4.4 68 92-159 41-110 (344)
60 COG3208 GrsT Predicted thioest 43.5 64 0.0014 27.5 5.4 14 92-105 74-87 (244)
61 PLN02679 hydrolase, alpha/beta 43.5 29 0.00063 31.4 3.7 28 77-110 146-173 (360)
62 PRK08775 homoserine O-acetyltr 42.1 31 0.00067 30.9 3.7 29 77-111 128-157 (343)
63 PRK10349 carboxylesterase BioH 41.6 35 0.00076 28.7 3.8 20 92-111 74-93 (256)
64 PF00561 Abhydrolase_1: alpha/ 41.6 39 0.00085 27.4 4.0 19 92-110 44-62 (230)
65 cd07214 Pat17_isozyme_like Pat 41.0 1E+02 0.0022 27.9 6.8 38 92-129 43-87 (349)
66 TIGR01392 homoserO_Ac_trn homo 40.4 38 0.00082 30.4 4.0 29 77-111 117-146 (351)
67 TIGR01250 pro_imino_pep_2 prol 40.2 35 0.00076 28.7 3.6 20 92-111 96-115 (288)
68 cd02394 vigilin_like_KH K homo 39.9 59 0.0013 20.6 3.9 44 145-194 16-60 (62)
69 PF05798 Phage_FRD3: Bacteriop 39.7 96 0.0021 20.4 4.5 43 146-194 9-55 (75)
70 PLN02211 methyl indole-3-aceta 39.4 37 0.0008 29.3 3.6 19 92-110 87-105 (273)
71 PLN02578 hydrolase 39.3 36 0.00078 30.6 3.7 20 92-111 152-171 (354)
72 TIGR03712 acc_sec_asp2 accesso 38.9 39 0.00084 31.9 3.7 23 95-117 360-382 (511)
73 TIGR03343 biphenyl_bphD 2-hydr 38.6 33 0.00071 29.3 3.2 28 78-111 93-120 (282)
74 PF07819 PGAP1: PGAP1-like pro 37.8 24 0.00053 29.6 2.1 19 92-110 85-103 (225)
75 PRK10673 acyl-CoA esterase; Pr 37.8 44 0.00094 27.9 3.8 20 92-111 81-100 (255)
76 TIGR03611 RutD pyrimidine util 37.2 43 0.00093 27.6 3.6 20 92-111 80-99 (257)
77 PRK07581 hypothetical protein; 36.7 45 0.00097 29.7 3.8 20 92-111 123-143 (339)
78 COG4188 Predicted dienelactone 36.7 31 0.00067 31.3 2.6 33 92-124 159-191 (365)
79 cd00519 Lipase_3 Lipase (class 35.7 29 0.00063 29.0 2.3 18 93-110 129-146 (229)
80 cd07215 Pat17_PNPLA8_PNPLA9_li 35.6 1.4E+02 0.003 26.7 6.8 38 92-129 40-84 (329)
81 PRK06765 homoserine O-acetyltr 34.5 55 0.0012 30.1 4.0 29 77-110 151-179 (389)
82 cd01819 Patatin_and_cPLA2 Pata 34.0 86 0.0019 24.5 4.6 36 71-110 11-46 (155)
83 TIGR03100 hydr1_PEP hydrolase, 33.9 60 0.0013 28.0 4.1 19 92-110 100-118 (274)
84 cd00741 Lipase Lipase. Lipase 33.5 34 0.00074 26.4 2.2 18 93-110 29-46 (153)
85 PF03190 Thioredox_DsbH: Prote 33.4 45 0.00098 26.5 2.9 47 256-302 9-61 (163)
86 cd07216 Pat17_PNPLA8_PNPLA9_li 32.8 1.4E+02 0.0031 26.3 6.4 37 93-129 43-80 (309)
87 KOG4409 Predicted hydrolase/ac 32.3 51 0.0011 29.7 3.2 29 77-110 150-178 (365)
88 PF00756 Esterase: Putative es 31.9 44 0.00096 28.1 2.9 33 75-110 101-133 (251)
89 PRK00175 metX homoserine O-ace 31.9 61 0.0013 29.5 3.9 29 77-111 137-166 (379)
90 PF12695 Abhydrolase_5: Alpha/ 31.8 41 0.00089 25.1 2.4 20 92-111 61-80 (145)
91 PRK14875 acetoin dehydrogenase 30.2 66 0.0014 28.7 3.9 20 92-111 197-216 (371)
92 PF10230 DUF2305: Uncharacteri 29.7 35 0.00076 29.5 1.8 19 92-110 84-102 (266)
93 COG2382 Fes Enterochelin ester 29.5 1.8E+02 0.0039 25.7 6.0 42 68-110 154-195 (299)
94 cd00707 Pancreat_lipase_like P 28.8 42 0.0009 29.2 2.2 20 92-111 112-131 (275)
95 PLN02733 phosphatidylcholine-s 28.4 71 0.0015 30.0 3.7 20 92-111 162-181 (440)
96 PRK10749 lysophospholipase L2; 27.7 83 0.0018 27.9 4.0 19 92-110 131-149 (330)
97 PF11187 DUF2974: Protein of u 27.6 42 0.00092 28.2 1.9 23 92-114 84-106 (224)
98 PLN00215 predicted protein; Pr 27.2 17 0.00037 24.8 -0.4 15 6-20 52-66 (110)
99 TIGR01738 bioH putative pimelo 27.1 50 0.0011 26.8 2.4 20 92-111 65-84 (245)
100 PHA02857 monoglyceride lipase; 27.0 48 0.001 28.3 2.3 20 92-111 97-116 (276)
101 PF00975 Thioesterase: Thioest 26.9 56 0.0012 26.9 2.6 18 93-110 67-84 (229)
102 COG1331 Highly conserved prote 26.7 82 0.0018 31.0 3.8 45 257-301 16-66 (667)
103 COG0596 MhpC Predicted hydrola 25.9 74 0.0016 25.6 3.2 19 92-110 88-106 (282)
104 PF10369 ALS_ss_C: Small subun 25.8 1.7E+02 0.0037 19.7 4.4 45 148-201 16-62 (75)
105 KOG2564 Predicted acetyltransf 25.7 35 0.00076 29.8 1.1 24 92-115 146-169 (343)
106 PF00326 Peptidase_S9: Prolyl 25.5 76 0.0016 25.9 3.1 32 75-111 50-83 (213)
107 COG2267 PldB Lysophospholipase 25.2 87 0.0019 27.6 3.6 19 92-110 107-125 (298)
108 PLN03219 uncharacterized prote 25.2 76 0.0017 23.2 2.6 21 26-46 63-83 (108)
109 PLN03220 uncharacterized prote 25.2 78 0.0017 23.1 2.6 21 26-46 61-81 (105)
110 TIGR01249 pro_imino_pep_1 prol 24.9 95 0.0021 27.1 3.8 21 92-112 95-115 (306)
111 KOG1454 Predicted hydrolase/ac 24.4 85 0.0018 28.1 3.4 21 92-112 128-148 (326)
112 COG2945 Predicted hydrolase of 24.3 83 0.0018 25.9 2.9 32 75-110 90-121 (210)
113 PRK03204 haloalkane dehalogena 24.3 87 0.0019 27.1 3.4 19 92-110 101-119 (286)
114 KOG3724 Negative regulator of 24.1 54 0.0012 32.9 2.1 21 93-113 183-203 (973)
115 PF06259 Abhydrolase_8: Alpha/ 24.1 3.9E+02 0.0083 21.6 7.3 19 93-111 110-128 (177)
116 PF07082 DUF1350: Protein of u 24.1 85 0.0018 26.9 3.1 66 32-103 36-101 (250)
117 cd04436 DEP_fRgd2 DEP (Disheve 24.0 1.9E+02 0.0042 20.2 4.3 42 222-265 4-45 (84)
118 PLN02872 triacylglycerol lipas 23.8 1.5E+02 0.0033 27.3 5.0 19 92-110 160-178 (395)
119 PLN02385 hydrolase; alpha/beta 23.4 56 0.0012 29.2 2.1 19 92-110 162-180 (349)
120 PLN02298 hydrolase, alpha/beta 23.4 54 0.0012 28.9 2.0 19 92-110 134-152 (330)
121 TIGR01607 PST-A Plasmodium sub 23.2 48 0.001 29.6 1.6 17 92-108 142-158 (332)
122 PRK06489 hypothetical protein; 23.1 1E+02 0.0022 27.8 3.7 18 94-111 156-173 (360)
123 PLN03090 auxin-responsive fami 22.9 90 0.0019 22.8 2.6 21 26-46 62-82 (104)
124 PLN03087 BODYGUARD 1 domain co 22.8 95 0.002 29.5 3.5 20 92-111 274-293 (481)
125 TIGR03230 lipo_lipase lipoprot 22.3 1.7E+02 0.0038 27.4 5.0 19 92-110 119-137 (442)
126 PF06028 DUF915: Alpha/beta hy 22.2 1.2E+02 0.0026 26.1 3.7 26 79-109 95-120 (255)
127 KOG4178 Soluble epoxide hydrol 22.1 2.3E+02 0.0049 25.3 5.4 19 92-110 113-131 (322)
128 COG4757 Predicted alpha/beta h 22.0 70 0.0015 27.2 2.1 12 92-103 105-116 (281)
129 KOG2439 Nuclear architecture r 21.6 2E+02 0.0044 26.5 5.0 26 104-129 62-87 (459)
130 PF02519 Auxin_inducible: Auxi 21.6 1.1E+02 0.0023 22.2 2.8 22 25-46 57-78 (100)
131 COG0429 Predicted hydrolase of 21.5 3.3E+02 0.0072 24.5 6.3 88 5-108 74-165 (345)
132 KOG3847 Phospholipase A2 (plat 21.2 34 0.00074 30.4 0.2 19 94-112 243-261 (399)
133 TIGR01836 PHA_synth_III_C poly 21.2 1.1E+02 0.0024 27.4 3.5 19 92-110 136-154 (350)
134 COG3113 Predicted NTP binding 20.7 3.4E+02 0.0073 19.6 5.3 71 108-196 15-91 (99)
135 PF11288 DUF3089: Protein of u 20.6 1.7E+02 0.0036 24.4 4.1 15 92-106 95-109 (207)
136 PRK10439 enterobactin/ferric e 20.5 79 0.0017 29.4 2.4 18 93-110 289-306 (411)
137 PF05277 DUF726: Protein of un 20.4 1.2E+02 0.0025 27.5 3.4 29 76-108 208-236 (345)
138 PF05728 UPF0227: Uncharacteri 20.1 90 0.002 25.4 2.4 18 93-110 60-77 (187)
No 1
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=100.00 E-value=1.8e-59 Score=420.63 Aligned_cols=308 Identities=78% Similarity=1.137 Sum_probs=279.8
Q ss_pred CCCCCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHH
Q 021568 2 MMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR 81 (311)
Q Consensus 2 ~~~~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~ 81 (311)
...+++++|+|||||+||.+|+++|.++|.|++.+++|++++|+++.+++.+.+++.++++.++|+.+|++|+|+++.|+
T Consensus 34 ~~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~l~ 113 (343)
T PLN02752 34 ADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEKLR 113 (343)
T ss_pred cCCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999998877666678889999999999999999999
Q ss_pred HccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccc
Q 021568 82 ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQE 161 (311)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~ 161 (311)
+++.+.+.+.+|++++|||+|||+|++++|+++++|+++++..|+++|+......++||+++.+++.+++++++++++++
T Consensus 114 ~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~~~ 193 (343)
T PLN02752 114 ARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAANEE 193 (343)
T ss_pred hcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhhhc
Confidence 98422222335788999999999999999999999999999999999988755678999999999999999999998865
Q ss_pred cCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEE
Q 021568 162 VDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVI 241 (311)
Q Consensus 162 ~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~ 241 (311)
......++|+++|+|++++|+|+++.++++.+.++..+..+.++|+++.|||||+|+++.+.+.+.+.++.+++|++|++
T Consensus 194 ~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~~pfHsp~m~~~~~~l~~~l~~~~~~~p~ipvi 273 (343)
T PLN02752 194 VGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVDALEAALAAVEIRTPRIPVI 273 (343)
T ss_pred cCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHHHHHHhcCCCCCCCceEE
Confidence 44456899999999999999999999999999888877667889999999999999999999999999999999999999
Q ss_pred EccCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeec
Q 021568 242 SNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 309 (311)
Q Consensus 242 s~~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~ 309 (311)
|+++|+++.+.+.++++|.+++++||+|..+++.+.+.+++.|||+||++.|+++++++.++.+..++
T Consensus 274 S~~tg~~~~~~~~~~~~l~~~l~~PV~~~~~i~~l~~~g~~~~iEiGP~~~L~~l~~~~~~~~~~~~~ 341 (343)
T PLN02752 274 SNVDAQPHSDPATIKKILARQVTSPVQWETTVKTLLEKGLEKSYELGPGKVIAGIVKRVDKGAKIENV 341 (343)
T ss_pred EcCCCCccCChHHHHHHHHHHCcCCEEHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHhhCCCceeec
Confidence 99999999888888999999999999999999999999999999999999999999999876655544
No 2
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=100.00 E-value=1.3e-59 Score=407.64 Aligned_cols=296 Identities=43% Similarity=0.696 Sum_probs=280.3
Q ss_pred CCEEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHcc
Q 021568 6 SLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 84 (311)
Q Consensus 6 ~~~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~ 84 (311)
.+++|+|||||+||.+|+++ +.+++.+++.++++++.+++++.+++.+.++..+..+.++||++++++++.++.|.+.+
T Consensus 2 ~~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l~~~l~~i~~~~p~~~L~~T~~tQPal~~~s~a~~~~l~~~~ 81 (310)
T COG0331 2 SKTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEALGFDLWALVFEGPEEELNLTQNTQPALLLVSLAAYRVLAEQG 81 (310)
T ss_pred CcceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHhcccHHHHhcCCCHHHhcccchhhHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999 68899999999999999999999999998888899999999999999999999999985
Q ss_pred CCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccCC
Q 021568 85 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 164 (311)
Q Consensus 85 ~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~~ 164 (311)
.+. +|++++|||+|||+|++++|+++++|+++++..||.+|+++.+...+.|.++.|++.++++++|++.++.
T Consensus 82 ~~~----~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~~--- 154 (310)
T COG0331 82 LGV----KPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQG--- 154 (310)
T ss_pred CCC----CCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhccC---
Confidence 345 8999999999999999999999999999999999999999987778999999999999999999998652
Q ss_pred CCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEcc
Q 021568 165 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNV 244 (311)
Q Consensus 165 ~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~ 244 (311)
..++|+++|+|.|+||+|++++++++...++..+.++..+|++++||||++|+|+.++|...+.+..+++|.+|+++++
T Consensus 155 -~~v~iaN~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~vs~pfHs~lm~pa~~~~~~~l~~~~~~~~~ipvi~n~ 233 (310)
T COG0331 155 -TVVEIANYNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPVSGPFHSPLMKPAADELAEALEKVRFSDPLVPVISNV 233 (310)
T ss_pred -CeEEEeeeCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCCCchhhhhhhHHHHHHHHHHHHhcCCCCccceeeecc
Confidence 3799999999999999999999999999999998777788999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeec
Q 021568 245 DAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 309 (311)
Q Consensus 245 ~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~ 309 (311)
+++...+.+.+++.+..|+..||+|.++++.+.+.|++.|+|+||+++|++++++++++.+..++
T Consensus 234 ~~~~~~~~~~i~~~L~~q~~~pVrW~etv~~l~~~gv~~~~EiGpg~vL~gL~kri~~~~~~~~~ 298 (310)
T COG0331 234 DAKPVLDGEEIRELLAKQLTSPVRWTETVETLKADGVTRFVEIGPGKVLTGLAKRILKGLGVRAV 298 (310)
T ss_pred ccccccCHHHHHHHHHHHhcCCeeHHHHHHHHHhcCceEEEEeCCcHHHHHHHHhhcCCCCceec
Confidence 99999999999999999999999999999999999999999999999999999999998877665
No 3
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=100.00 E-value=2.5e-56 Score=392.96 Aligned_cols=286 Identities=44% Similarity=0.763 Sum_probs=264.1
Q ss_pred EEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHccCC
Q 021568 8 LLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGG 86 (311)
Q Consensus 8 ~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~~g 86 (311)
++|+|+|||+||.+|++. |..+|.||+.+|+|++++|+++.+++.+.+...++++...|+++|++|+|+++.|++++ |
T Consensus 3 ~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~~~~~al~~~l~~~g-~ 81 (290)
T TIGR00128 3 IAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEALGYDLKKLCQEGPAEELNKTQYTQPALYVVSAILYLKLKEQG-G 81 (290)
T ss_pred EEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHhCcCHHHHHhCCCHHHhccccchhHHHHHHHHHHHHHHHHcC-C
Confidence 799999999999999999 68999999999999999999999998766555667788999999999999999999994 4
Q ss_pred CCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccCCCC
Q 021568 87 QQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDN 166 (311)
Q Consensus 87 i~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~~~~ 166 (311)
+ .|++++|||+||++|++++|++|++|++++++.|+++|++......+.|+++.+.+.+++++.+++++. .
T Consensus 82 i----~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~-----~ 152 (290)
T TIGR00128 82 L----KPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEATE-----N 152 (290)
T ss_pred C----CCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcCC-----C
Confidence 8 899999999999999999999999999999999999999875455788888889999999999987641 4
Q ss_pred ceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEccCC
Q 021568 167 KVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDA 246 (311)
Q Consensus 167 ~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~~g 246 (311)
.++|+++|+|++++|+|+++.++++.+.++..+..+...|+++.|||+++|++..+++.+.+..+.+++|++|++|+++|
T Consensus 153 ~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~l~~~~~~~~~~l~~~~~~~p~ipi~S~~~g 232 (290)
T TIGR00128 153 DVDLANFNSPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEVSGAFHSRFMKPAAEKFAETLEACQFNDPTVPVISNVDA 232 (290)
T ss_pred cEEEEEECCCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCccEEECCCC
Confidence 68999999999999999999999999998887655678899999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCC
Q 021568 247 QPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKS 303 (311)
Q Consensus 247 ~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~ 303 (311)
+.+...+.+.++|.+++++||+|.++++.+.+.++.+|+|+||+.+|++++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~~ie~gp~~~l~~~~~~~~~~ 289 (290)
T TIGR00128 233 KPYTNGDRIKEKLSEQLTSPVRWTDSVEKLMARGVTEFAEVGPGKVLTGLIKRIKND 289 (290)
T ss_pred CccCCHHHHHHHHHHHccCCccHHHHHHHHHHCCCCEEEEECCchHHHHHHHHhcCC
Confidence 999877888999999999999999999999999999999999999999999998765
No 4
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=100.00 E-value=4.7e-57 Score=401.62 Aligned_cols=275 Identities=39% Similarity=0.618 Sum_probs=247.9
Q ss_pred EEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhh----CCCHHHHhccCCc-cccccCcchhhHHHHHHHHHHHHHHH
Q 021568 9 LFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK-EKLDSTIISQPAIYVTSLAAVELLRA 82 (311)
Q Consensus 9 ~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l----~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~q~al~~~l~~ 82 (311)
+|+|||||+||.+|+++ |..+|.|++.+++|++++ |+++.+++.+.+. ..+.++.+.|++++++|+|++++|++
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~ 80 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS 80 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence 69999999999999999 688899999999999875 8999999887764 67788899999999999999999999
Q ss_pred ccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhcccc
Q 021568 83 RDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEV 162 (311)
Q Consensus 83 ~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~ 162 (311)
+ |+ +|++++|||+||++|++++|+++++|++++++.|+++|++.. .++.|++|.. +..+..+..
T Consensus 81 ~--Gi----~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~--~~g~m~av~~---~~~~~~~~~----- 144 (318)
T PF00698_consen 81 W--GI----KPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA--PPGAMLAVRG---EEEEEKLAL----- 144 (318)
T ss_dssp T--TH----CESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS--TSEEEEEEES---HHHHHHHHT-----
T ss_pred c--cc----ccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh--hcccccchhh---hHHhhhccc-----
Confidence 9 77 999999999999999999999999999999999999999873 7889999955 333333321
Q ss_pred CCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEE
Q 021568 163 DEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVIS 242 (311)
Q Consensus 163 ~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s 242 (311)
.++++|+++|+|+++||+|+.+.++++.+.+++.+ .+.+.|++++|||||+|+++.++|.+.+.++.+++|++|++|
T Consensus 145 --~~~v~ia~~Ns~~q~visG~~~~l~~~~~~l~~~~-~~~~~l~v~~afHs~~m~~~~~~~~~~l~~~~~~~p~ip~~S 221 (318)
T PF00698_consen 145 --PPDVEIANINSPRQVVISGEREALEALVERLKAEG-IKAKRLPVSYAFHSPLMEPAADEFREALESIEFRPPKIPVYS 221 (318)
T ss_dssp --TTTEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTT-SEEEEESSSSETTSGGGHHHHHHHHHHHHTSCSCCCSSEEEE
T ss_pred --cccceeeeeccccccccCCCHHHHHHHHHHhhccc-eeEEEeeeeccccCchhhhhHHHHHhhhhcccccccccccee
Confidence 67899999999999999999999999999999988 558899999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcC
Q 021568 243 NVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDK 302 (311)
Q Consensus 243 ~~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~ 302 (311)
+++|+.+.+.+...+||.+++++||+|.++++.+.+.|+++|||+||+++|+++++++++
T Consensus 222 ~~~g~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fiEiGP~~~L~~~~~~~l~ 281 (318)
T PF00698_consen 222 NVTGRPYDDPELIAEYWARQLRSPVRFREAVEALYEDGVRVFIEIGPGSVLTSLVKRILK 281 (318)
T ss_dssp TTTSSBEHSHHHHHHHHHHHHHSHEEHHHHHHHHHHTTEEEEEEESSSSHHHHHHHHHST
T ss_pred ecccccccccccchhHHHhccCCcCChHHHHHHHHhcCCCEEEEeCchHHHHHHHHHHHh
Confidence 999999977777789999999999999999999999999999999999999999999998
No 5
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=100.00 E-value=5.1e-55 Score=385.05 Aligned_cols=284 Identities=31% Similarity=0.450 Sum_probs=261.2
Q ss_pred EEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHccCCC
Q 021568 8 LLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQ 87 (311)
Q Consensus 8 ~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~~gi 87 (311)
++|+|||||+||.+|++++..+|.|++.+++|++++++++.++ .+.+.+.++..+|+.++++|+|+++.|+++ |+
T Consensus 1 ~~~~F~GqG~q~~~m~~~l~~~p~~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~qp~i~~~q~al~~~l~~~--g~ 75 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVLGIDPREL---DDAEALASTRSAQLCILAAGVAAWRALLAL--LP 75 (295)
T ss_pred CEEEECCcchhhhhHHHHHHhCHHHHHHHHHHHHHhCcCHHHc---CCHhhhccchhhhHHHHHHHHHHHHHHHhc--CC
Confidence 5799999999999999998888999999999999999999884 223456778899999999999999999999 76
Q ss_pred CccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccCCCCc
Q 021568 88 QIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNK 167 (311)
Q Consensus 88 ~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~~~~~ 167 (311)
+|++++|||+||++|++++|+++++|++++++.|+++|++.. ..++.|+++.+.+.++++++++++ .
T Consensus 76 ----~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~-~~~~~m~av~~~~~~~~~~~l~~~--------~ 142 (295)
T TIGR03131 76 ----RPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAV-PGGYGMLAVLGLDLAAVEALIAKH--------G 142 (295)
T ss_pred ----CCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc-CCCCCEEEEeCCCHHHHHHHHHHc--------C
Confidence 899999999999999999999999999999999999998764 235679888899999999999764 3
Q ss_pred eEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEccCCC
Q 021568 168 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQ 247 (311)
Q Consensus 168 ~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~~g~ 247 (311)
++|+++|+|++++|+|+++.++++.+.++..+..+.+.|+++.|||+++|+++.+++.+.+..+.++.|++|++|+++|+
T Consensus 143 v~ia~~Nsp~~~visG~~~~l~~l~~~l~~~g~~~~~~l~v~~afHs~~~~~~~~~~~~~l~~~~~~~~~ip~~S~~~g~ 222 (295)
T TIGR03131 143 VYLAIINAPDQVVIAGSRAALRAVAELARAAGASRAKRLAVRVPSHTPLLAKAAEQFAEALAEIPLAAPRLPYLSGIDAR 222 (295)
T ss_pred EEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCceEEECCCCe
Confidence 89999999999999999999999999999887656899999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeec
Q 021568 248 PHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 309 (311)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~ 309 (311)
.+.+.+.+++||.+++++||+|..+++.+.+.|.+.|||+||++++++++++++++....++
T Consensus 223 ~~~~~~~~~~~~~~~l~~pV~~~~~i~~l~~~g~~~~veiGp~~~l~~~~~~~~~~~~~~~~ 284 (295)
T TIGR03131 223 LVRDAAQIRDDLARQIATPVDWHDCMQAAYERGARLVIELGPGDVLTKLANEAFPELPARSA 284 (295)
T ss_pred ecCCHHHHHHHHHHHhcCCCcHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHhcCCCcEEec
Confidence 99888888999999999999999999999999999999999999999999999988776654
No 6
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=100.00 E-value=2.4e-52 Score=369.01 Aligned_cols=278 Identities=29% Similarity=0.475 Sum_probs=254.8
Q ss_pred ECCCCcchhhhhHH-hhccHHHHHHHHHHHHhh----CCCHHHHhccCCc--cccccCcchhhHHHHHHHHHHHHHHHcc
Q 021568 12 VLSQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK--EKLDSTIISQPAIYVTSLAAVELLRARD 84 (311)
Q Consensus 12 F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l----~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~q~al~~~l~~~~ 84 (311)
|||||+||.+|+++ +..+|.|++.+++|++++ |+++.+++.+.++ ..++++..+|++++++|+|+++.|+++
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~~a~~~~l~~~- 79 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQVALARLWRSW- 79 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHHHHHHHHHHHc-
Confidence 89999999999999 578999999999999987 9999999876432 346778899999999999999999988
Q ss_pred CCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccCC
Q 021568 85 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 164 (311)
Q Consensus 85 ~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~~ 164 (311)
|+ +|++++|||+||++|++++|+++++|++++++.|+++|++.. .++.|+++ +.+.+++++.+++++
T Consensus 80 -Gi----~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~~--~~g~m~av-~~~~~~~~~~l~~~~----- 146 (298)
T smart00827 80 -GV----RPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQALP--GGGAMLAV-GLSEEEVEELLAGYG----- 146 (298)
T ss_pred -CC----cccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcC--CCCeEEEE-eCCHHHHHHHHHhcC-----
Confidence 77 899999999999999999999999999999999999999873 46799999 999999999998763
Q ss_pred CCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEcc
Q 021568 165 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNV 244 (311)
Q Consensus 165 ~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~ 244 (311)
..++|+++|+|++++|+|+++.++++.+.++..+. +.++|++.+|||+++|+++.+.+.+.+..+.+.+|++|++|++
T Consensus 147 -~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~-~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~~~~pv~S~~ 224 (298)
T smart00827 147 -GRVSVAAVNGPSSVVLSGDEDAVDELAAALEARGI-RARRLKVDHAFHSPHMDPILDEFREALAGITPRPPRIPFVSTV 224 (298)
T ss_pred -CcEEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCc-eEEECCCCCCCchHHHHHHHHHHHHHHhhCCCCCCCCcEEeCC
Confidence 56999999999999999999999999999888765 4888999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHH-HHHHHHhhcCccchHHHHHHHHH-CCCCEEEEECCChhHHHHHHHhcCCCc
Q 021568 245 DAQPHADPEVI-KKILAQQVTSPVQWETTVKTLLG-KGLKKSYELGPGKVIAGIVKRLDKSAE 305 (311)
Q Consensus 245 ~g~~~~~~~~~-~~~~~~~l~~pv~~~~~i~~~~~-~~~~~~ve~Gp~~~l~~~~~~~~~~~~ 305 (311)
+|+++.+.+.. +++|.+++++||+|.++++.+.+ .|...|+|+||+.++++++++++++..
T Consensus 225 ~g~~~~~~~~~~~~~l~~~l~~pV~~~~~i~~l~~~~g~~~~ie~Gp~~~l~~~~~~~~~~~~ 287 (298)
T smart00827 225 TGELIDGAELDDAEYWVRNLREPVRFADAVRALLAEQGVTVFLEVGPHPVLTGPIKQTLPAAG 287 (298)
T ss_pred CCcccCCCCCCCHHHHHHHhhccEeHHHHHHHHHHcCCCcEEEEeCCcHHHHHHHHHHHhccC
Confidence 99998766555 89999999999999999999996 689999999999999999999987653
No 7
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism]
Probab=100.00 E-value=9.3e-51 Score=341.80 Aligned_cols=300 Identities=52% Similarity=0.798 Sum_probs=277.8
Q ss_pred CCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHcc
Q 021568 5 RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 84 (311)
Q Consensus 5 ~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~ 84 (311)
+...+++|||||.||.+|++.+.++|..++.+++|.+++|+++++++.++|++.++++...|++|++.++|..+.++..+
T Consensus 61 ~e~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl~YdLlki~~~gP~e~ldrT~~~QpAI~~~SlAa~E~l~~~~ 140 (386)
T KOG2926|consen 61 KETSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVLGYDLLKICVNGPKEKLDRTVIAQPAIDVSSLAALEQLRLLG 140 (386)
T ss_pred ccceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHhhHHHHHHHhcCccchhhcccccccceecccHHHHHhccccC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccC-
Q 021568 85 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD- 163 (311)
Q Consensus 85 ~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~- 163 (311)
+++ +..-+...|||+|||+|++.++++++.++++++..|+..|+++.+--+++|..+.+.+..++.+.+...+....
T Consensus 141 p~~--ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~~ 218 (386)
T KOG2926|consen 141 PSI--IENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSAS 218 (386)
T ss_pred cch--hheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhhh
Confidence 544 43456789999999999999999999999999999999999988788899999999999999999888765422
Q ss_pred -CCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEE
Q 021568 164 -EDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVIS 242 (311)
Q Consensus 164 -~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s 242 (311)
+.+-++||++|+|+++||+|..+.|+-+.+..+.++..+.+.|+|++||||++|+|+++++..+++.+.++.|.+||||
T Consensus 219 qe~~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaVsgAFHTr~MepAvepl~~Al~~vei~~p~~pViS 298 (386)
T KOG2926|consen 219 QEYPVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAVSGAFHTRLMEPAVEPLTKALKAVEIKNPVIPVIS 298 (386)
T ss_pred ccCCeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeeeccccchhhhhhhHHHHHHHHHHHHhcCCCcceee
Confidence 3477899999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHC---CCCEEEEECCChhHHHHHHHhcCCCce
Q 021568 243 NVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGK---GLKKSYELGPGKVIAGIVKRLDKSAEM 306 (311)
Q Consensus 243 ~~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~---~~~~~ve~Gp~~~l~~~~~~~~~~~~~ 306 (311)
|++|+++.+...++..+..++.+||+|+.+++++.+. +...++|+|||..+.++++++......
T Consensus 299 Nvdg~~~~~~~hi~~~l~kQ~~rPV~we~~~~ti~sk~~~g~~~sye~GPG~~l~~ilk~~~~~a~~ 365 (386)
T KOG2926|consen 299 NVDGKPYRDPGHILKQLAKQIVRPVQWEQTLKTIYSKQGVGFPRSYEVGPGRVLVAILKRNNPQADF 365 (386)
T ss_pred cCCCcccCChHHHHHHHHHHhcCchhHHHHHHHHHhcCCCCCCceEeeCCcHHHHHHHHHhCchhhh
Confidence 9999999999999999999999999999999999997 778999999999999999998766543
No 8
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=2e-48 Score=409.40 Aligned_cols=287 Identities=27% Similarity=0.360 Sum_probs=253.7
Q ss_pred CCCEEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhhC----CCHHHHhccC----------CccccccCcchhhHH
Q 021568 5 RSLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILG----FDLLEICTNG----------PKEKLDSTIISQPAI 69 (311)
Q Consensus 5 ~~~~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l~----~~l~~~~~~~----------~~~~~~~~~~~~~~i 69 (311)
.++++|+|+|||+||.+|+++ |..+|.||+.+++|++.++ .++.+++... ....+.+..++|++|
T Consensus 578 ~~kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~~~~~~~~L~~t~~aQPaI 657 (2582)
T TIGR02813 578 SGKVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDESRKAQEEALTNTQHAQSAI 657 (2582)
T ss_pred CCceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhccccccccccccchhhhhccchhHHHHH
Confidence 467999999999999999999 6899999999999999874 4566665321 123467788999999
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhccc-CCCceEEEEcCC--
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD-AAKGAMVSIIGL-- 146 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~-~~~~~m~~v~~~-- 146 (311)
+++|++++++|+++ |+ +|++++|||+|||+|++++|+++++|++++++.||++|.+... ...|+|+++...
T Consensus 658 ~a~q~Al~~lL~~~--Gi----~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~~~~~G~M~AV~l~~~ 731 (2582)
T TIGR02813 658 GTLSMGQYKLFTQA--GF----KADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTGEADIGFMYAVILAVV 731 (2582)
T ss_pred HHHHHHHHHHHHHc--CC----ccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCCceeEEEEcccc
Confidence 99999999999998 88 8999999999999999999999999999999999999997642 246899998432
Q ss_pred -CHHHHHHHHHHhccccCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHH
Q 021568 147 -DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLE 225 (311)
Q Consensus 147 -~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~ 225 (311)
..+.+++.+.. .+.++|+|+|+|+++||+|+.+.++++.+.++..+. +.+.|+++.+|||++|+++.++|.
T Consensus 732 ~~~~~v~~~l~~-------~~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi-~a~~L~Vs~AFHSplm~~a~~~f~ 803 (2582)
T TIGR02813 732 GSPTVIANCIKD-------FEGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGF-KAIPLPVSGAFHTPLVAHAQKPFS 803 (2582)
T ss_pred ccHHHHHHHhcc-------CCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCC-eEEECCCCCCcCcHHHHHHHHHHH
Confidence 34556666543 346999999999999999999999999999998875 589999999999999999999999
Q ss_pred HHHhcCCCCCCCccEEEccCCCCCC-ChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCC
Q 021568 226 AALAATQINTPRMPVISNVDAQPHA-DPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSA 304 (311)
Q Consensus 226 ~~l~~~~~~~p~~pv~s~~~g~~~~-~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~ 304 (311)
+.++++.++.|++|||||++|+++. +.+.+++||.+|+++||+|..+++.+.+.|.++|||+||+++|++++++++++.
T Consensus 804 ~~L~~i~~~~P~ipv~SnvtG~~~~~~~~~i~~~~~~ql~~PV~F~~aIe~l~~~G~~~FVEiGPg~vLt~lv~~il~~~ 883 (2582)
T TIGR02813 804 AAIDKAKFNTPLVPLYSNGTGKLHSNDAAAIKKALKNHMLQSVHFSEQLEAMYAAGARVFVEFGPKNILQKLVENTLKDK 883 (2582)
T ss_pred HHHhhCCCCCCCceEEECCCCeEecCchhhHHHHHHHHhhCeecHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHHhhcc
Confidence 9999999999999999999999885 566778999999999999999999999999999999999999999999999875
Q ss_pred c
Q 021568 305 E 305 (311)
Q Consensus 305 ~ 305 (311)
.
T Consensus 884 ~ 884 (2582)
T TIGR02813 884 E 884 (2582)
T ss_pred C
Confidence 3
No 9
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=100.00 E-value=6.5e-45 Score=336.21 Aligned_cols=274 Identities=17% Similarity=0.147 Sum_probs=227.8
Q ss_pred CCCEEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhhCCCHHHHhccCC-----ccccccCcchhhHHHH--HHHHH
Q 021568 5 RSLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGP-----KEKLDSTIISQPAIYV--TSLAA 76 (311)
Q Consensus 5 ~~~~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~--~q~al 76 (311)
+++++|+|+|||+||.+|+++ |..+|.|++.+|++. ++.+.+.... .....+..+.++++|+ +++++
T Consensus 180 ~~~vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~~-----~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~~aL 254 (538)
T TIGR02816 180 KAGLAFVYPGVGTVYADMFNDFHQYFPALFAKLEREG-----DLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSSYLL 254 (538)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhhCHHHHHHHHhcC-----CHHHHhccccccccchhhhhhhhhHhHHHHHHHHHHHH
Confidence 468999999999999999999 799999999999873 5666553211 1223345567888885 59999
Q ss_pred HHHHH-HccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhccc----------------CCCce
Q 021568 77 VELLR-ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD----------------AAKGA 139 (311)
Q Consensus 77 ~~~l~-~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~----------------~~~~~ 139 (311)
+++|+ ++ || +|++++|||+||++|++++|+|+.+|++..+..|+.+++.... ...+|
T Consensus 255 a~ll~~~~--GI----~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~~ 328 (538)
T TIGR02816 255 TQLLCDEF--AI----KPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQW 328 (538)
T ss_pred HHHHHHhc--CC----CCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhccccccccccc
Confidence 99995 66 88 9999999999999999999999999999999888877754210 12346
Q ss_pred EEEEcCCCHHHHHHHHHHhccccCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCC-----CCc
Q 021568 140 MVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGA-----FHT 214 (311)
Q Consensus 140 m~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~-----~Hs 214 (311)
|.++.+.+.++++++|.. .++++|+++|+ +++||+|++++++++.+.++..+. +.+.|++..+ ||+
T Consensus 329 ~~avV~a~~~~V~~~L~~-------~~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~Gi-~~r~L~a~HA~pam~~HS 399 (538)
T TIGR02816 329 NSFVVRCEAAPIEALLKD-------FPHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRGI-AANRVTAMHTQPALQEHQ 399 (538)
T ss_pred cceeecCCHHHHHHHhcc-------CCCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCCe-eeeeccccccCccccccc
Confidence 666668999999999965 34699999998 799999999999999999998764 4788888776 899
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEcc--CCCC-----CCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEE
Q 021568 215 GFMEPAVSRLEAALAATQINTPRMPVISNV--DAQP-----HADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYEL 287 (311)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~--~g~~-----~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~ 287 (311)
++|+++.++|...+ +|++|++|++ +|++ ..+.+.+.+||.+|+++||+|..+++.+.+.|..+|||+
T Consensus 400 ~~me~~l~~f~~~l------~p~ip~iSnvt~tG~~~~~~~~~d~~~ia~yw~~ql~~PVrF~~~I~~L~~~Gv~~FVEI 473 (538)
T TIGR02816 400 NVMDFYLQPLCAEL------PMDIKFISAADLLAKNQNSEQAIDSQSIANSIADTFCQTLDFTALIHHAQEQGAKLFVEI 473 (538)
T ss_pred HHHHHHHHHHHhhc------ccCCeeeecccccCcccCCCcCCCHHHHHHHHHHcCCCccCHHHHHHHHHHCCCCEEEEe
Confidence 99999999887654 6899999998 4653 234566789999999999999999999999999999999
Q ss_pred CCChhHHHHHHHhcCCC
Q 021568 288 GPGKVIAGIVKRLDKSA 304 (311)
Q Consensus 288 Gp~~~l~~~~~~~~~~~ 304 (311)
||+++|++++++++++.
T Consensus 474 GPg~vLs~lv~~~l~~~ 490 (538)
T TIGR02816 474 GADRQNCTLIDKINKQD 490 (538)
T ss_pred CCChHHHHHHHHHhhcc
Confidence 99999999999998643
No 10
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-36 Score=300.60 Aligned_cols=282 Identities=32% Similarity=0.469 Sum_probs=247.8
Q ss_pred CEEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhh----CCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHH
Q 021568 7 LLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR 81 (311)
Q Consensus 7 ~~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l----~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~ 81 (311)
+++|+|+|||+||.+|+++ +..+|.|+.+++.|+..+ ++++.+.+.......+......|+.++++|++++++|+
T Consensus 526 ~~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~~ala~l~~ 605 (1061)
T COG3321 526 KTVFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVSVALAALWR 605 (1061)
T ss_pred ceEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHcCCcccceecCCCCccccCcchhhhHHHHHHHHHHHHHH
Confidence 5899999999999999999 799999999999997654 77777766554322255566889999999999999999
Q ss_pred HccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCH-HHHHHHHHHhcc
Q 021568 82 ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDS-DKVQQLCDAANQ 160 (311)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~-~~~~~~l~~~~~ 160 (311)
++ |+ .|+.++|||+||++|++++|++|++|++++...|+++|+... ..+.|++| ..+. +.+.+++...
T Consensus 606 s~--gv----~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v~~Rg~lm~~~~--~~G~m~~v-~~~~~~~~~~~~~~~-- 674 (1061)
T COG3321 606 SW--GV----IPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLMQQLA--GEGAMLAV-ELSLLAEVQELLALG-- 674 (1061)
T ss_pred hc--CC----cCccccCcCHHHHHHHHHhccCChhhhhHhhhhcchhhccCC--CCcchhhh-hcCccchhhHHhhcc--
Confidence 97 77 899999999999999999999999999999999999999952 33899999 5555 7777777542
Q ss_pred ccCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccE
Q 021568 161 EVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPV 240 (311)
Q Consensus 161 ~~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv 240 (311)
..++.|+.+|+|++++|+|+++.+.++...+...+ .....+++.++||++.|+++.+++...+.++..+.|.+|+
T Consensus 675 ----~~~v~ia~~n~P~~~vi~g~~~~i~~l~~~~~~~~-~~~~~~~v~~a~hs~~m~~~~~~~~~~la~i~~~~p~~p~ 749 (1061)
T COG3321 675 ----RPQVPLAAVNSPQQVVIAGDPEAIAALIARLQAQG-VRARRLAVSHAFHSPLMDPILDEFAAALADLAPRPPQIPL 749 (1061)
T ss_pred ----ccceeEEEecCCceEEecCCHHHHHHHHHHHhccC-cccceeeeeeccccHHHHHHHHHHHHHHhhcccCCCCcce
Confidence 25799999999999999999999999999998865 3488899999999999999999999999999999999999
Q ss_pred EEccCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCC
Q 021568 241 ISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSA 304 (311)
Q Consensus 241 ~s~~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~ 304 (311)
+|++++.+....-...+||.+++++||+|..+++.+.+.+..+|+|+||+..+...+++++...
T Consensus 750 ~S~~~~~~~~~~~~d~~yw~~~~r~~v~f~~~i~~~~~~~~~~f~E~~p~p~l~~~~~~~~~~~ 813 (1061)
T COG3321 750 ISNVTGDLAGEPGGDAQYWVQHLRQPVRFADAIAAALADGARTFIEVGPGPVLTESIKQTLRDA 813 (1061)
T ss_pred eeeeeccccCCcccCHHHHHHHHHhhccHHHHHHHHHhcccceEEEecCCHhHHHHHHHHhhhh
Confidence 9999999843333338999999999999999999999999999999999999999999987653
No 11
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=285.79 Aligned_cols=280 Identities=21% Similarity=0.288 Sum_probs=248.6
Q ss_pred CCCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhh---CCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHH
Q 021568 4 ARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDIL---GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELL 80 (311)
Q Consensus 4 ~~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l---~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l 80 (311)
..+|+.|+++|-|+||.+|+.++-+-+.|++.+.+|++.+ |+++.+.+.+..+..+++..++...++++|+|+.++|
T Consensus 497 ~eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitAiQiaLtDlL 576 (2376)
T KOG1202|consen 497 GERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITAIQIALTDLL 576 (2376)
T ss_pred CCcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999987 8999999988877788888899999999999999999
Q ss_pred HHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhcc
Q 021568 81 RARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQ 160 (311)
Q Consensus 81 ~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~ 160 (311)
..+ || +||.++|||.||+.|+|+.|.++.|+.+.++|+||+-+-++ ...+|.|.+| |++.|++.+-+
T Consensus 577 s~l--gi----~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~-~l~kGaMAAV-GLsWEq~~~~~----- 643 (2376)
T KOG1202|consen 577 SCL--GI----RPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDT-HLPKGAMAAV-GLSWEQCKSRC----- 643 (2376)
T ss_pred Hhc--CC----CCCcccccccchhcccccccccCHHHHHHHHHHcCceeccc-cCCCcchhhh-cCCHHHHhccC-----
Confidence 999 88 99999999999999999999999999999999999988776 5789999999 99999988866
Q ss_pred ccCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcC-CCCCCCccchHHHHHHHHHHHhcCC--CCCCC
Q 021568 161 EVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLA-VAGAFHTGFMEPAVSRLEAALAATQ--INTPR 237 (311)
Q Consensus 161 ~~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~-v~~~~Hs~~~~~~~~~~~~~l~~~~--~~~p~ 237 (311)
+++++-+|.||.++++||||++.+.++.+.+++.+. +.+.+. -.++||||+|+.+.+++++.++++- .++.+
T Consensus 644 ----P~~~~paCHNs~D~~TiSGp~a~v~~~v~qL~~~gv-Fak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i~epK~rs 718 (2376)
T KOG1202|consen 644 ----PPDVVPACHNSKDNVTISGPQASVFAFVEQLRAEGV-FAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVIPEPKPRS 718 (2376)
T ss_pred ----CCcccccccCCCCceEecCChHHHHHHHHHhhhcCe-eeeEecCCCccccCHHHHhhChHHHHHHHHhcCCCCCcc
Confidence 889999999999999999999999999999999875 477766 5789999999999999998887763 34455
Q ss_pred ccEEEccCC--CCCCChHH--HHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCC
Q 021568 238 MPVISNVDA--QPHADPEV--IKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKS 303 (311)
Q Consensus 238 ~pv~s~~~g--~~~~~~~~--~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~ 303 (311)
..|+|+.-. +|-++... ..+|..++++.||.|.++++.+.++ .+++|+-|+.-+...++|.++.
T Consensus 719 arWlSTSipEa~W~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP~n--Av~vEiAPH~LlqAiLkRsL~p 786 (2376)
T KOG1202|consen 719 ARWLSTSIPEAQWHSSLARTSSAEYHVNNLVSPVLFHEALQHVPEN--AVVVEIAPHGLLQAILKRSLKP 786 (2376)
T ss_pred cchhhccCChhhhcChhhhhcchhhhhhccccHHHHHHHHHhCccc--ceEEEecchHHHHHHHHhhcCC
Confidence 779998654 34333222 3689999999999999999999887 7899999999999999988753
No 12
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=91.70 E-value=1.2 Score=35.74 Aligned_cols=49 Identities=27% Similarity=0.409 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 69 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 69 i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
..+.+++..+.|.+. |+ .++.+.|-|.|-+.|+..+...+.++..++..
T Consensus 9 rG~~~~Gvl~aL~e~--gi----~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~~ 57 (172)
T cd07198 9 LGIYHVGVAKALRER--GP----LIDIIAGTSAGAIVAALLASGRDLEEALLLLL 57 (172)
T ss_pred HHHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 346788999999998 77 79999999999999999999899998877763
No 13
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=90.70 E-value=6 Score=36.04 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 021568 65 SQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQ 130 (311)
Q Consensus 65 ~~~~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~ 130 (311)
..-.+.+..++.+..|.+.+ ..++..++.+.|-|.|.++|++.+...+++++.+.++...+-..
T Consensus 16 GgGflG~yHvGV~~~L~e~~--p~ll~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~ia~~~r 79 (405)
T cd07223 16 GAGYLGLYHVGVTECLRQRA--PRLLQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLGMVKHLE 79 (405)
T ss_pred CcHHHHHHHHHHHHHHHHhC--chhhccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh
Confidence 35567788999999999883 32233567899999999999999999999977666665443333
No 14
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=88.92 E-value=1.5 Score=35.21 Aligned_cols=48 Identities=21% Similarity=0.327 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
-+.+++..+.|.+. |+ .++.++|-|.|-+.|+..+...+.++..+...
T Consensus 12 G~~~~Gvl~~L~~~--~~----~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~ 59 (175)
T cd07205 12 GLAHIGVLKALEEA--GI----PIDIVSGTSAGAIVGALYAAGYSPEEIEERAK 59 (175)
T ss_pred HHHHHHHHHHHHHc--CC----CeeEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35578888888887 66 79999999999999999888888888777654
No 15
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=87.64 E-value=1.9 Score=35.14 Aligned_cols=48 Identities=25% Similarity=0.249 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
-+.+++..+.|.+. |+ .|+.++|-|.|-+.|+..+...+.++..++..
T Consensus 11 G~~~~Gvl~~L~e~--~~----~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~ 58 (194)
T cd07207 11 GIAYIGALKALEEA--GI----LKKRVAGTSAGAITAALLALGYSAADIKDILK 58 (194)
T ss_pred HHHHHHHHHHHHHc--CC----CcceEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34567888888887 66 78999999999999988887778877766554
No 16
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=87.25 E-value=2.2 Score=35.84 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
.+.+++..+.|.+. |+ .++.+.|-|.|-+.|+..+...+.++..+...
T Consensus 12 G~~~~GvL~aL~e~--gi----~~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~ 59 (221)
T cd07210 12 FYAHLGFLAALLEM--GL----EPSAISGTSAGALVGGLFASGISPDEMAELLL 59 (221)
T ss_pred HHHHHHHHHHHHHc--CC----CceEEEEeCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 46688888999888 77 79999999999999999888888888776654
No 17
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=86.33 E-value=4.8 Score=36.63 Aligned_cols=56 Identities=16% Similarity=0.262 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 66 QPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 66 ~~~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
.....+.+++.++.|.+. |++++...+.++|-|.|-+.|+..+...+.++..++..
T Consensus 20 GGfrGiYHvGVl~aL~E~--gp~ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~ 75 (382)
T cd07219 20 SGFLSFYQAGVVDALRDL--APRMLETAHRVAGTSAGSVIAALVVCGISMDEYLRVLN 75 (382)
T ss_pred cHHHHHHHHHHHHHHHhc--CCcccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 455667799999999987 43323357899999999999998888888888877765
No 18
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=85.87 E-value=2.2 Score=35.60 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCC
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 114 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s 114 (311)
.+.+++..+.|.+. |+ .++.+.|-|.|-+.|+..+...+
T Consensus 10 G~~~~Gvl~aL~e~--g~----~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 10 GAYQAGVLKALAEA--GI----EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCc
Confidence 46788999999998 66 89999999999999998887776
No 19
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=85.57 E-value=2.7 Score=36.49 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~ 122 (311)
-+..++..+.|.+. |+ .++++.|-|+|-+.++..+...+.++....+
T Consensus 22 G~ahiGVL~aLeE~--gi----~~d~v~GtSaGAiiga~ya~g~~~~~~~~r~ 68 (269)
T cd07227 22 GISHIGILQALEEA--GI----PIDAIGGTSIGSFVGGLYAREADLVPIFGRA 68 (269)
T ss_pred HHHHHHHHHHHHHc--CC----CccEEEEECHHHHHHHHHHcCCchHHHHHHH
Confidence 45678888899888 77 7999999999998888777777777765443
No 20
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=85.47 E-value=5.1 Score=33.95 Aligned_cols=56 Identities=23% Similarity=0.273 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 021568 67 PAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG 126 (311)
Q Consensus 67 ~~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~ 126 (311)
-.+.+..++..+.|.+. |+ .+..+.++|-|.|-+.|+..+...+.++..++.....
T Consensus 8 G~lg~yh~GVl~~L~e~--gi--~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~~~ 63 (233)
T cd07224 8 GLLFPYHLGVLSLLIEA--GV--INETTPLAGASAGSLAAACSASGLSPEEALEATEELA 63 (233)
T ss_pred HHHHHHHHHHHHHHHHc--CC--CCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 35567788999999988 65 2235689999999999999888888888877665443
No 21
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=84.28 E-value=3.3 Score=36.68 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
-+.+++..+.|.+. |+ .|+++.|-|+|.+.|+..|...+.++....+.
T Consensus 23 G~~hiGVl~aL~e~--gi----~~~~iaGtS~GAiva~l~A~g~~~~~~~~~~~ 70 (306)
T COG1752 23 GAAHIGVLKALEEA--GI----PIDVIAGTSAGAIVAALYAAGMDEDELELAAQ 70 (306)
T ss_pred HHHHHHHHHHHHHc--CC----CccEEEecCHHHHHHHHHHcCCChhHHHHHHH
Confidence 45688888999998 77 89999999999999998887777766544444
No 22
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=84.14 E-value=3.4 Score=36.61 Aligned_cols=48 Identities=17% Similarity=0.285 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
-+..+++.+.|.+. |+ .++.++|-|.|-+.++..+.-.+.++..+++.
T Consensus 27 G~ahiGvL~aLee~--gi----~~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~~ 74 (306)
T cd07225 27 GCAHIGVIKALEEA--GI----PVDMVGGTSIGAFIGALYAEERNISRMKQRAR 74 (306)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 45678888999998 77 89999999999888777666677776665554
No 23
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=84.12 E-value=3.5 Score=33.11 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKL 121 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l 121 (311)
-+.+++..+.|.+. |+ .++.+.|-|.|-+.|+..+...+.++...+
T Consensus 12 G~~~~Gvl~~L~e~--g~----~~d~i~GtSaGAi~aa~~a~g~~~~~~~~~ 57 (175)
T cd07228 12 GWAHIGVLRALEEE--GI----EIDIIAGSSIGALVGALYAAGHLDALEEWV 57 (175)
T ss_pred HHHHHHHHHHHHHC--CC----CeeEEEEeCHHHHHHHHHHcCCCHHHHHHH
Confidence 45678888889888 66 799999999999988887777776655433
No 24
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=83.38 E-value=7.2 Score=33.43 Aligned_cols=57 Identities=16% Similarity=0.083 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHH
Q 021568 67 PAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 125 (311)
Q Consensus 67 ~~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r 125 (311)
-...+..++..+.|.+. |+.++..++.++|-|.|-++|+..+...+.++..+.....
T Consensus 13 G~rG~yh~GVl~~L~e~--g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~~~ 69 (249)
T cd07220 13 GFLGVYHVGVASCLLEH--APFLVANARKIYGASAGALTATALVTGVCLGECGASVIRV 69 (249)
T ss_pred HHHHHHHHHHHHHHHhc--CCcccccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34566788889999988 5422223789999999999999887777887765555443
No 25
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=83.19 E-value=6.8 Score=33.43 Aligned_cols=55 Identities=15% Similarity=0.222 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHH
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~ 124 (311)
...+..++..+.|.+. |+.+....+.++|-|.|-+.|+..+...+.++..+....
T Consensus 9 ~~G~yh~GVl~~L~e~--g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~~ 63 (243)
T cd07204 9 FLGIYHVGVASALREH--APRLLQNARRIAGASAGAIVAAVVLCGVSMEEACSFILK 63 (243)
T ss_pred HHHHHHHHHHHHHHHc--CcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3455688899999988 552111246999999999999998888888886655543
No 26
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=82.86 E-value=4 Score=37.38 Aligned_cols=49 Identities=20% Similarity=0.221 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
..-+..++.++.|.+. |+ .|+.+.|-|.|.+.|+.++. -+.+|..++..
T Consensus 93 ~~G~~h~Gv~kaL~e~--gl----~p~~i~GtS~Gaivaa~~a~-~~~~e~~~~l~ 141 (391)
T cd07229 93 IFGLCHLGVVKALWLR--GL----LPRIITGTATGALIAALVGV-HTDEELLRFLD 141 (391)
T ss_pred HHHHHHHHHHHHHHHc--CC----CCceEEEecHHHHHHHHHHc-CCHHHHHHHHh
Confidence 3445588899999998 77 89999999999999999888 57788877765
No 27
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=82.25 E-value=6.2 Score=33.72 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
...+..++..+.|++. |+. ..++.+.|-|.|-+.|+..+...+.++..+...
T Consensus 10 ~rG~yh~GVl~aL~e~--g~~--~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 61 (245)
T cd07218 10 FLGIYHVGVAVCLKKY--APH--LLLNKISGASAGALAACCLLCDLPLGEMTSDFL 61 (245)
T ss_pred HHHHHHHHHHHHHHHh--Ccc--cCCCeEEEEcHHHHHHHHHHhCCcHHHHHHHHH
Confidence 4456788899999998 420 146889999999999999888888877665544
No 28
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=81.31 E-value=6.1 Score=33.96 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHH
Q 021568 69 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (311)
Q Consensus 69 i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~ 124 (311)
..+.+++..+.|.+. |+.+...++.++|-|.|-+.|+..+...+.++..+....
T Consensus 11 rG~yh~GVl~aL~e~--~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~ 64 (252)
T cd07221 11 LGFYHVGVTRCLSER--APHLLRDARMFFGASAGALHCVTFLSGLPLDQILQILMD 64 (252)
T ss_pred HHHHHHHHHHHHHHh--CcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 445688899999888 542232478999999999999998877888887776654
No 29
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=77.61 E-value=9 Score=34.05 Aligned_cols=54 Identities=20% Similarity=0.172 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 021568 72 TSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG 126 (311)
Q Consensus 72 ~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~ 126 (311)
+.+.+.+.+++.. |..+...+|.+.|-|.|-+.|+..+..++.+|..++....+
T Consensus 13 ~~i~vL~~le~~~-g~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~ 66 (312)
T cd07212 13 VLIQMLIAIEKAL-GRPIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMK 66 (312)
T ss_pred HHHHHHHHHHHHh-CCCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhh
Confidence 3445556666642 43222347999999999999888888899999988865544
No 30
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=75.88 E-value=10 Score=33.68 Aligned_cols=48 Identities=19% Similarity=0.103 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHH
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~ 122 (311)
...+..++..+.|.+. |+ .|+.+.|-|.|.+.|+..+. .+.+|..++.
T Consensus 78 ~~g~~h~GVlkaL~e~--gl----~p~~i~GsSaGAivaa~~~~-~t~~El~~~~ 125 (323)
T cd07231 78 ALGTFHVGVVRTLVEH--QL----LPRVIAGSSVGSIVCAIIAT-RTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 3346688899999988 77 89999999999999888776 5777777665
No 31
>PRK10279 hypothetical protein; Provisional
Probab=75.81 E-value=4.7 Score=35.65 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHH-HhcC
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALA-FAGA 112 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~-~ag~ 112 (311)
.+.+++..+.|.+. |+ .|++++|-|.|-+.++. ++|.
T Consensus 17 G~ahiGVL~aL~E~--gi----~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 17 GWSHIGVINALKKV--GI----EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHHHHc--CC----CcCEEEEEcHHHHHHHHHHcCC
Confidence 45688889999998 77 89999999999877755 5554
No 32
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=74.37 E-value=17 Score=31.08 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhc
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag 111 (311)
...+..++..+.|.+. |+.+...++.+.|-|.|-+.|+..+.
T Consensus 9 ~rG~yhiGVl~~L~e~--g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 9 FLGIYHLGAAKALLRH--GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHHHHHHHc--CchhhccCCEEEEECHHHHHHHHHhc
Confidence 3456788899999988 65323347899999999999998874
No 33
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=70.89 E-value=12 Score=33.51 Aligned_cols=99 Identities=17% Similarity=0.093 Sum_probs=49.3
Q ss_pred CCCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCcccccc--Ccch----hhHHHHHH-HHH
Q 021568 4 ARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDS--TIIS----QPAIYVTS-LAA 76 (311)
Q Consensus 4 ~~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~----~~~i~~~q-~al 76 (311)
.++|++..++|-|.++...-+.+...|.+++-+. .-++..+. +-.+.|+..... ..++ +....+.+ -++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~--s~~le~Py--yg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIA--SLILENPY--YGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcc--eEEEeccc--ccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 3578889999999887665555544444443111 00111110 011222211111 0111 11222332 335
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHhcC
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
...+++. |. .|-.+.|.|+|-.-|+.++..
T Consensus 166 l~Wl~~~--G~----~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 166 LHWLERE--GY----GPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHHHhc--CC----CceEEEEechhHhhHHhhhhc
Confidence 5566666 55 688999999987766655543
No 34
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=70.83 E-value=12 Score=34.87 Aligned_cols=46 Identities=15% Similarity=0.108 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHH
Q 021568 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~ 122 (311)
-+..++..+.|.+. |+ .|+++.|-|.|.+.|+..+. -+.++..++.
T Consensus 85 G~~hiGVLkaL~E~--gl----~p~vIsGTSaGAivAal~as-~~~eel~~~l 130 (421)
T cd07230 85 GMFHIGVLKALFEA--NL----LPRIISGSSAGSIVAAILCT-HTDEEIPELL 130 (421)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 34578888888888 77 79999999999998887766 5667755544
No 35
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=70.58 E-value=14 Score=32.44 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 021568 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG 126 (311)
Q Consensus 71 ~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~ 126 (311)
++++.+.+.+++.+ ..+...+|.++|-|.|-+.|+..+...+.++..++....+
T Consensus 15 i~~~~vL~~Le~~~--~~~~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~~ 68 (288)
T cd07213 15 IVQLVLLKRLAEEF--PSFLDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEVG 68 (288)
T ss_pred HHHHHHHHHHHHhC--cccccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHhC
Confidence 45666666677763 2223357999999999999998887789999888776554
No 36
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=69.48 E-value=13 Score=34.43 Aligned_cols=46 Identities=20% Similarity=0.103 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHH
Q 021568 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (311)
Q Consensus 71 ~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~ 123 (311)
+..++..+.|.+. |+ .|++++|-|.|.+.|+..+. -+.++..++..
T Consensus 80 ~~h~GVlkaL~e~--gl----lp~iI~GtSAGAivaalla~-~t~~el~~~~~ 125 (407)
T cd07232 80 YYHFGVVKALLDA--DL----LPNVISGTSGGSLVAALLCT-RTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHHHHhC--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHHh
Confidence 4477888888888 66 89999999999998888776 56677655543
No 37
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=67.23 E-value=23 Score=31.32 Aligned_cols=58 Identities=22% Similarity=0.391 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHh-cCCCHHHHHHHHHHHHHHH
Q 021568 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA-GAFSFEDGLKLVKLRGAAM 129 (311)
Q Consensus 71 ~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a-g~~s~~d~~~l~~~r~~~~ 129 (311)
++++.+.+.+.+.. +..+....|.+.|-|.|-+.|+..+ +.++.+|..++....+..+
T Consensus 21 ~~~~~vL~~Le~~~-~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~~~i 79 (308)
T cd07211 21 VVALEILRKIEKLT-GKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLGKDV 79 (308)
T ss_pred HHHHHHHHHHHHHh-CCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHHHHh
Confidence 44666666666653 3322223589999999998888876 4689999988876655433
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=66.54 E-value=7.2 Score=32.56 Aligned_cols=31 Identities=23% Similarity=0.125 Sum_probs=23.8
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHhcCC
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 113 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~ 113 (311)
.+++.+. ++ .+..++|||+|-..|+.++...
T Consensus 57 ~~~l~~~--~~----~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 57 SQTLQSY--NI----LPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHc--CC----CCeEEEEECHHHHHHHHHHHhC
Confidence 3456665 55 7889999999999998887654
No 39
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.30 E-value=11 Score=32.42 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHccCCCCccCC-ceEEecccHHHHHHHHHhcCCC
Q 021568 70 YVTSLAAVELLRARDGGQQIIDS-VDVTCGLSLGEYTALAFAGAFS 114 (311)
Q Consensus 70 ~~~q~al~~~l~~~~~gi~~~~~-p~~~~G~S~Ge~~A~~~ag~~s 114 (311)
-+.+.+..+.|.+. |+ . ++.++|-|.|-+.|+..+...+
T Consensus 10 G~~~~Gvl~al~e~--~~----~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 10 GAYTAGVLDAFLEA--GI----RPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHHHHHc--CC----CCCCEEEEECHHHHhHHHHHhCCc
Confidence 35678888888888 66 5 9999999999988776544333
No 40
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=61.37 E-value=34 Score=29.28 Aligned_cols=56 Identities=29% Similarity=0.346 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHccCCCC--ccCCceEEecccHHHHHHHHHhcC-CCHHHHHHHHHHHHH
Q 021568 71 VTSLAAVELLRARDGGQQ--IIDSVDVTCGLSLGEYTALAFAGA-FSFEDGLKLVKLRGA 127 (311)
Q Consensus 71 ~~q~al~~~l~~~~~gi~--~~~~p~~~~G~S~Ge~~A~~~ag~-~s~~d~~~l~~~r~~ 127 (311)
++++.+.+.+.+.. +.. +....+.++|-|.|-+.|+..+.. .+.++..++....+.
T Consensus 12 ~~~~~~L~~le~~~-~~~~~~~~~fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~~ 70 (258)
T cd07199 12 IIPAEILAELEKRL-GKPSRIADLFDLIAGTSTGGIIALGLALGRYSAEELVELYEELGR 70 (258)
T ss_pred HHHHHHHHHHHHHh-CCCCchhhccceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHhH
Confidence 34455555555543 211 222468999999999888887766 999999987766543
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=61.16 E-value=30 Score=28.19 Aligned_cols=21 Identities=29% Similarity=0.237 Sum_probs=16.7
Q ss_pred CceEEecccHHHHHHHHHhcC
Q 021568 92 SVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
.+-.++|||+|-..|+.++..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHh
Confidence 577899999998888776643
No 42
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=60.96 E-value=28 Score=28.47 Aligned_cols=21 Identities=43% Similarity=0.607 Sum_probs=16.6
Q ss_pred CceEEecccHHHHHHHHHhcC
Q 021568 92 SVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
.+-.++|||+|-..|+.++..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CceEEEEeCchHHHHHHHHHH
Confidence 566899999998888776653
No 43
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=59.41 E-value=25 Score=31.04 Aligned_cols=39 Identities=21% Similarity=0.176 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHhcC
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
...+..++..+.|.+. |+ .|+.+.|-|.|.+.|+..+..
T Consensus 79 ~~g~~h~Gvl~aL~e~--~l----~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 79 SLGLFHLGVVKALWEQ--DL----LPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHHHHHHHHHHHc--CC----CCCEEEEEcHHHHHHHHHHcC
Confidence 3445688888988887 76 799999999999888876653
No 44
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=55.17 E-value=65 Score=29.71 Aligned_cols=20 Identities=35% Similarity=0.371 Sum_probs=16.5
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-.++|||+|-+.|+.++.
T Consensus 176 ~~~~lvGhS~GG~la~~~a~ 195 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYAL 195 (402)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 57789999999988887653
No 45
>PF03958 Secretin_N: Bacterial type II/III secretion system short domain; InterPro: IPR005644 This is a group of NolW-like proteins, which are closely related to bacterial type II and III secretion system protein (IPR004846 from INTERPRO).; PDB: 3EZJ_C 2Y3M_A 3OSS_D.
Probab=54.86 E-value=48 Score=22.42 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=27.4
Q ss_pred CceEEEeecCCCcEEEEcChhhHHHHHHHHHhc
Q 021568 166 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 198 (311)
Q Consensus 166 ~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~ 198 (311)
..+.|......|+.+|.|+++.++.+.+.++..
T Consensus 44 ~~~~i~~d~~tNsliv~g~~~~~~~i~~li~~L 76 (82)
T PF03958_consen 44 SSGRIVADERTNSLIVRGTPEDLEQIRELIKQL 76 (82)
T ss_dssp TTTEEEEECTTTEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCEEEEEeCHHHHHHHHHHHHHH
Confidence 456888888889999999999998888777664
No 46
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=54.67 E-value=16 Score=31.39 Aligned_cols=20 Identities=30% Similarity=0.237 Sum_probs=17.1
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+..++|||+|-..|+.++.
T Consensus 91 ~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred CceEEEEECHHHHHHHHHHH
Confidence 67889999999998888774
No 47
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=53.98 E-value=16 Score=31.60 Aligned_cols=30 Identities=13% Similarity=-0.051 Sum_probs=21.7
Q ss_pred HHHHHHHccCCCCccCCceEEecccHHHHHHHHHhc
Q 021568 76 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 76 l~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag 111 (311)
+..++.+. ++ .+..++|||+|-..|+..+.
T Consensus 92 l~~~l~~l--~~----~~~~lvGhS~Gg~va~~~a~ 121 (294)
T PLN02824 92 LNDFCSDV--VG----DPAFVICNSVGGVVGLQAAV 121 (294)
T ss_pred HHHHHHHh--cC----CCeEEEEeCHHHHHHHHHHH
Confidence 34455566 44 67889999999888877663
No 48
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=53.48 E-value=12 Score=30.00 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=15.9
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+.+++|||+|-++++-..
T Consensus 55 ~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHH
Confidence 6789999999988887644
No 49
>PRK10985 putative hydrolase; Provisional
Probab=51.77 E-value=46 Score=29.54 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=12.6
Q ss_pred CceEEecccHHHHHHH
Q 021568 92 SVDVTCGLSLGEYTAL 107 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~ 107 (311)
.+-.++|||+|-..++
T Consensus 131 ~~~~~vG~S~GG~i~~ 146 (324)
T PRK10985 131 VPTAAVGYSLGGNMLA 146 (324)
T ss_pred CCEEEEEecchHHHHH
Confidence 5789999999986433
No 50
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=51.54 E-value=15 Score=31.09 Aligned_cols=28 Identities=39% Similarity=0.307 Sum_probs=20.3
Q ss_pred HHHHHccCCCCccCCceEEecccHHHHHHHHHhc
Q 021568 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag 111 (311)
.++.+. ++ ++..++|||+|-..|+.++.
T Consensus 87 ~~i~~~--~~----~~~~lvG~S~Gg~~a~~~a~ 114 (278)
T TIGR03056 87 ALCAAE--GL----SPDGVIGHSAGAAIALRLAL 114 (278)
T ss_pred HHHHHc--CC----CCceEEEECccHHHHHHHHH
Confidence 345555 44 67799999999888777653
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=50.80 E-value=23 Score=31.39 Aligned_cols=20 Identities=15% Similarity=-0.087 Sum_probs=16.4
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-.++|||+|-.+|..++.
T Consensus 108 ~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred CceEEEEECHHHHHHHHHhc
Confidence 56789999999999877664
No 52
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=50.41 E-value=25 Score=28.15 Aligned_cols=28 Identities=39% Similarity=0.459 Sum_probs=20.8
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
.+.+++. +. .+..++|||+|-..++..+
T Consensus 57 ~~~l~~~--~~----~~~~lvG~S~Gg~~a~~~a 84 (228)
T PF12697_consen 57 AELLDAL--GI----KKVILVGHSMGGMIALRLA 84 (228)
T ss_dssp HHHHHHT--TT----SSEEEEEETHHHHHHHHHH
T ss_pred hhccccc--cc----ccccccccccccccccccc
Confidence 3456666 43 6789999999988877665
No 53
>PRK00870 haloalkane dehalogenase; Provisional
Probab=49.74 E-value=21 Score=31.12 Aligned_cols=28 Identities=11% Similarity=0.004 Sum_probs=20.5
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
...+.+. ++ .+..++|||+|-+.|...+
T Consensus 106 ~~~l~~l--~~----~~v~lvGhS~Gg~ia~~~a 133 (302)
T PRK00870 106 RSWFEQL--DL----TDVTLVCQDWGGLIGLRLA 133 (302)
T ss_pred HHHHHHc--CC----CCEEEEEEChHHHHHHHHH
Confidence 3456666 54 6778999999988777655
No 54
>PRK11071 esterase YqiA; Provisional
Probab=48.09 E-value=26 Score=28.51 Aligned_cols=20 Identities=30% Similarity=0.204 Sum_probs=17.2
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
++..++|||+|-+.|+..+.
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 67899999999998888764
No 55
>PRK03592 haloalkane dehalogenase; Provisional
Probab=48.00 E-value=24 Score=30.62 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=21.4
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHhc
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag 111 (311)
..++.+. ++ .+..++|||+|-..|+..+.
T Consensus 84 ~~ll~~l--~~----~~~~lvGhS~Gg~ia~~~a~ 112 (295)
T PRK03592 84 DAWFDAL--GL----DDVVLVGHDWGSALGFDWAA 112 (295)
T ss_pred HHHHHHh--CC----CCeEEEEECHHHHHHHHHHH
Confidence 3455666 55 78899999999888876653
No 56
>PLN02965 Probable pheophorbidase
Probab=47.48 E-value=21 Score=30.24 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=15.8
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
++..++|||+|-..|..++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred CCEEEEecCcchHHHHHHH
Confidence 4789999999988777765
No 57
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=45.48 E-value=32 Score=29.78 Aligned_cols=28 Identities=32% Similarity=0.344 Sum_probs=21.0
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
++.+++. +. .+-.++|||+|-..|+.++
T Consensus 90 i~~L~~~--~~----~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 90 YRWLIEQ--GH----PPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHhc--CC----CCEEEEEECHHHHHHHHHH
Confidence 4456665 44 6789999999988887655
No 58
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=44.89 E-value=17 Score=27.45 Aligned_cols=17 Identities=41% Similarity=0.216 Sum_probs=12.4
Q ss_pred eEEecccHHHHHHHHHh
Q 021568 94 DVTCGLSLGEYTALAFA 110 (311)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (311)
-.+.|||+|---|..++
T Consensus 66 i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 66 IVITGHSLGGALASLAA 82 (140)
T ss_dssp EEEEEETHHHHHHHHHH
T ss_pred chhhccchHHHHHHHHH
Confidence 46899999976555544
No 59
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.68 E-value=36 Score=30.73 Aligned_cols=68 Identities=22% Similarity=0.197 Sum_probs=42.8
Q ss_pred CceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEE--EcCCCHHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVS--IIGLDSDKVQQLCDAAN 159 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~--v~~~~~~~~~~~l~~~~ 159 (311)
..|.+.|-|.|-+.|+..+..++.+|..++....+..+=............ ....+.+.+++.+.++-
T Consensus 41 ~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~~iF~~~~~~~~l~~~~~~~~y~~~~L~~~L~~~f 110 (344)
T cd07217 41 YFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGVNMFDKAWLAQRLFLNKLYNQYDPTNLGKKLNTVF 110 (344)
T ss_pred cccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhhhhcCchhhhhhccccccccccCcHHHHHHHHHHc
Confidence 368999999999999998888999999988876654332110000000000 01146677777777653
No 60
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.54 E-value=64 Score=27.48 Aligned_cols=14 Identities=21% Similarity=0.183 Sum_probs=11.7
Q ss_pred CceEEecccHHHHH
Q 021568 92 SVDVTCGLSLGEYT 105 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~ 105 (311)
+|-++.|||||-+-
T Consensus 74 ~P~alfGHSmGa~l 87 (244)
T COG3208 74 APFALFGHSMGAML 87 (244)
T ss_pred CCeeecccchhHHH
Confidence 78899999999543
No 61
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=43.47 E-value=29 Score=31.36 Aligned_cols=28 Identities=25% Similarity=0.290 Sum_probs=19.7
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
.+++.+. ++ .+..++|||+|-+.|+.++
T Consensus 146 ~~~l~~l--~~----~~~~lvGhS~Gg~ia~~~a 173 (360)
T PLN02679 146 LDFLEEV--VQ----KPTVLIGNSVGSLACVIAA 173 (360)
T ss_pred HHHHHHh--cC----CCeEEEEECHHHHHHHHHH
Confidence 3455555 44 6788999999987766543
No 62
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=42.06 E-value=31 Score=30.85 Aligned_cols=29 Identities=34% Similarity=0.424 Sum_probs=20.5
Q ss_pred HHHHHHccCCCCccCCc-eEEecccHHHHHHHHHhc
Q 021568 77 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p-~~~~G~S~Ge~~A~~~ag 111 (311)
..++.+. |+ .. ..++|||+|-+.|+..+.
T Consensus 128 ~~ll~~l--~l----~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 128 ALLLDAL--GI----ARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred HHHHHHc--CC----CcceEEEEECHHHHHHHHHHH
Confidence 3456666 54 34 469999999888887664
No 63
>PRK10349 carboxylesterase BioH; Provisional
Probab=41.62 E-value=35 Score=28.74 Aligned_cols=20 Identities=30% Similarity=0.229 Sum_probs=16.4
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+..++|||+|-..|...+.
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~ 93 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIAL 93 (256)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 56688999999998887763
No 64
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=41.62 E-value=39 Score=27.39 Aligned_cols=19 Identities=32% Similarity=0.335 Sum_probs=14.9
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
+.-.++|||+|-..++..+
T Consensus 44 ~~~~~vG~S~Gg~~~~~~a 62 (230)
T PF00561_consen 44 KKINLVGHSMGGMLALEYA 62 (230)
T ss_dssp SSEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEECCChHHHHHHH
Confidence 4578999999987776654
No 65
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=41.00 E-value=1e+02 Score=27.90 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=29.3
Q ss_pred CceEEecccHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHH
Q 021568 92 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAM 129 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag-------~~s~~d~~~l~~~r~~~~ 129 (311)
..|.++|-|.|-+.|+..+. .++.+|.+++-..++..+
T Consensus 43 ~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~~~i 87 (349)
T cd07214 43 YFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENGPKI 87 (349)
T ss_pred hCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhHHh
Confidence 47999999999887777664 378899988877666543
No 66
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=40.36 E-value=38 Score=30.41 Aligned_cols=29 Identities=31% Similarity=0.279 Sum_probs=20.8
Q ss_pred HHHHHHccCCCCccCCc-eEEecccHHHHHHHHHhc
Q 021568 77 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p-~~~~G~S~Ge~~A~~~ag 111 (311)
..++.++ |+ .+ ..++|||+|-..|+..+.
T Consensus 117 ~~~~~~l--~~----~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 117 KLLLDHL--GI----EQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred HHHHHHc--CC----CCceEEEEECHHHHHHHHHHH
Confidence 3455666 55 45 789999999888776653
No 67
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=40.19 E-value=35 Score=28.67 Aligned_cols=20 Identities=25% Similarity=0.082 Sum_probs=16.8
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-.++|||+|-+.|+.++.
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CcEEEEEeehHHHHHHHHHH
Confidence 56789999999988888764
No 68
>cd02394 vigilin_like_KH K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has been shown to bind RNA and to associate with both soluble and membrane-bound polyribosomes as a mRNP component. Bicaudal-C is a RNA-binding molecule believed to function in embryonic development at the post-transcriptional level. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=39.92 E-value=59 Score=20.64 Aligned_cols=44 Identities=7% Similarity=0.285 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHhccccCCCCceEEEee-cCCCcEEEEcChhhHHHHHHH
Q 021568 145 GLDSDKVQQLCDAANQEVDEDNKVQIANY-LCPGNYAVSGGVKGIEAVEAK 194 (311)
Q Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~~~ia~~-ns~~~~vvsG~~~~l~~l~~~ 194 (311)
|..-..++++.++++.. +.+.-. +..+.++|.|+.+.+......
T Consensus 16 G~~G~~i~~i~~~~g~~------I~i~~~~~~~~~v~I~G~~~~v~~A~~~ 60 (62)
T cd02394 16 GKKGSNIRKIMEETGVK------IRFPDPGSKSDTITITGPKENVEKAKEE 60 (62)
T ss_pred CCCCCcHHHHHHHhCCE------EEcCCCCCCCCEEEEEcCHHHHHHHHHH
Confidence 55556667777666433 222221 246789999999888776654
No 69
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=39.65 E-value=96 Score=20.42 Aligned_cols=43 Identities=9% Similarity=0.137 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHhccccCCCCceEEEee-cCC---CcEEEEcChhhHHHHHHH
Q 021568 146 LDSDKVQQLCDAANQEVDEDNKVQIANY-LCP---GNYAVSGGVKGIEAVEAK 194 (311)
Q Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~ia~~-ns~---~~~vvsG~~~~l~~l~~~ 194 (311)
++-+...++++.- .+.+.|..+ +++ -+++|.||.+.|.++...
T Consensus 9 VDfEY~eEvIRNR------yPelsi~si~d~~f~~~~i~i~GPle~l~~FM~n 55 (75)
T PF05798_consen 9 VDFEYTEEVIRNR------YPELSITSIQDSKFCSIQIVIEGPLEDLTRFMAN 55 (75)
T ss_pred eehHhHHHHHHcc------CCceEEEEeecCCcceEEEEEeccHHHHHHHHHH
Confidence 4667888888642 566666544 443 357789999999988754
No 70
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=39.44 E-value=37 Score=29.32 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=15.8
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
++..++|||+|-+.+..++
T Consensus 87 ~~v~lvGhS~GG~v~~~~a 105 (273)
T PLN02211 87 EKVILVGHSAGGLSVTQAI 105 (273)
T ss_pred CCEEEEEECchHHHHHHHH
Confidence 5778999999988877665
No 71
>PLN02578 hydrolase
Probab=39.32 E-value=36 Score=30.63 Aligned_cols=20 Identities=45% Similarity=0.464 Sum_probs=16.8
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
++..++|||+|-+.|+..+.
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~ 171 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAV 171 (354)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 67899999999988877664
No 72
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=38.89 E-value=39 Score=31.87 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.3
Q ss_pred EEecccHHHHHHHHHhcCCCHHH
Q 021568 95 VTCGLSLGEYTALAFAGAFSFED 117 (311)
Q Consensus 95 ~~~G~S~Ge~~A~~~ag~~s~~d 117 (311)
++.|.|||.+.|+|.+..+++..
T Consensus 360 ILSGlSMGTfgAlYYga~l~P~A 382 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAKLSPHA 382 (511)
T ss_pred eeccccccchhhhhhcccCCCce
Confidence 68899999999999998888754
No 73
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=38.64 E-value=33 Score=29.29 Aligned_cols=28 Identities=36% Similarity=0.297 Sum_probs=20.5
Q ss_pred HHHHHccCCCCccCCceEEecccHHHHHHHHHhc
Q 021568 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag 111 (311)
+++... ++ ++-.++|||+|-+.|...+.
T Consensus 93 ~~l~~l--~~----~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 93 GLMDAL--DI----EKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred HHHHHc--CC----CCeeEEEECchHHHHHHHHH
Confidence 445555 54 67789999999888877664
No 74
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=37.84 E-value=24 Score=29.64 Aligned_cols=19 Identities=21% Similarity=0.195 Sum_probs=15.3
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
++-.++|||+|-+.|-.+.
T Consensus 85 ~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 85 RSVILVGHSMGGLVARSAL 103 (225)
T ss_pred CceEEEEEchhhHHHHHHH
Confidence 5678999999988776654
No 75
>PRK10673 acyl-CoA esterase; Provisional
Probab=37.83 E-value=44 Score=27.94 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=16.3
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-.++|||+|-..|+..+.
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~ 100 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTA 100 (255)
T ss_pred CceEEEEECHHHHHHHHHHH
Confidence 56789999999988887664
No 76
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=37.24 E-value=43 Score=27.63 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=16.6
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-.++|||+|-..|..++.
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CcEEEEEechhHHHHHHHHH
Confidence 56789999999988887765
No 77
>PRK07581 hypothetical protein; Validated
Probab=36.68 E-value=45 Score=29.67 Aligned_cols=20 Identities=20% Similarity=0.302 Sum_probs=15.8
Q ss_pred Cc-eEEecccHHHHHHHHHhc
Q 021568 92 SV-DVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p-~~~~G~S~Ge~~A~~~ag 111 (311)
.+ ..++|||+|-+.|+..+-
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~ 143 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAV 143 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHH
Confidence 55 578999999988887654
No 78
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=36.67 E-value=31 Score=31.26 Aligned_cols=33 Identities=30% Similarity=0.199 Sum_probs=26.8
Q ss_pred CceEEecccHHHHHHHHHhcCCCHHHHHHHHHH
Q 021568 92 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~ 124 (311)
.+..++|||+|-++++..+|+-.--+.+...+.
T Consensus 159 ~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~ 191 (365)
T COG4188 159 QRVGVLGHSFGGYTAMELAGAELDAEALLQHCE 191 (365)
T ss_pred cceEEEecccccHHHHHhccccccHHHHHHHhh
Confidence 567899999999999999998777666665554
No 79
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=35.70 E-value=29 Score=28.99 Aligned_cols=18 Identities=33% Similarity=0.257 Sum_probs=13.5
Q ss_pred ceEEecccHHHHHHHHHh
Q 021568 93 VDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (311)
+-.+.|||+|--.|..++
T Consensus 129 ~i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 129 KIIVTGHSLGGALASLLA 146 (229)
T ss_pred eEEEEccCHHHHHHHHHH
Confidence 447999999976666555
No 80
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=35.55 E-value=1.4e+02 Score=26.66 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=29.0
Q ss_pred CceEEecccHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHH
Q 021568 92 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAM 129 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag-------~~s~~d~~~l~~~r~~~~ 129 (311)
..|.+.|-|.|-+.|+..+. .++.++++++-..++..+
T Consensus 40 ~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~~~~I 84 (329)
T cd07215 40 YFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLERGNYI 84 (329)
T ss_pred ccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHhhHhh
Confidence 46899999999988776543 478899998877666544
No 81
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=34.54 E-value=55 Score=30.12 Aligned_cols=29 Identities=28% Similarity=0.434 Sum_probs=19.7
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
..++.++ |+. +..+++|||+|-..|+..+
T Consensus 151 ~~ll~~l--gi~---~~~~vvG~SmGG~ial~~a 179 (389)
T PRK06765 151 KELIKSL--GIA---RLHAVMGPSMGGMQAQEWA 179 (389)
T ss_pred HHHHHHc--CCC---CceEEEEECHHHHHHHHHH
Confidence 4456666 661 4456999999987776544
No 82
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=34.02 E-value=86 Score=24.46 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 71 ~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
+.+++..+.|.+. ++ ...++++.|.|.|-+.|+..+
T Consensus 11 ~~~~gvl~~l~~~--~~--~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 11 MYHAGVLSALAER--GL--LDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHHHh--CC--ccCCCEEEEEcHHHHHHHHHh
Confidence 4678888888887 33 126889999999999998887
No 83
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=33.91 E-value=60 Score=27.97 Aligned_cols=19 Identities=32% Similarity=0.275 Sum_probs=14.4
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
..-.++|||+|-+.++..+
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred CcEEEEEECHHHHHHHHHh
Confidence 3457889999988777654
No 84
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=33.46 E-value=34 Score=26.44 Aligned_cols=18 Identities=28% Similarity=0.006 Sum_probs=13.1
Q ss_pred ceEEecccHHHHHHHHHh
Q 021568 93 VDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (311)
.-.++|||+|--.|..++
T Consensus 29 ~i~v~GHSlGg~lA~l~a 46 (153)
T cd00741 29 KIHVTGHSLGGALAGLAG 46 (153)
T ss_pred eEEEEEcCHHHHHHHHHH
Confidence 347899999976666554
No 85
>PF03190 Thioredox_DsbH: Protein of unknown function, DUF255; InterPro: IPR004879 This is a group of uncharacterised proteins.; PDB: 3IRA_A.
Probab=33.36 E-value=45 Score=26.52 Aligned_cols=47 Identities=15% Similarity=0.160 Sum_probs=30.5
Q ss_pred HHHHHHhhcCccch----HHHHHHHHHCCCCEEEEECCCh--hHHHHHHHhcC
Q 021568 256 KKILAQQVTSPVQW----ETTVKTLLGKGLKKSYELGPGK--VIAGIVKRLDK 302 (311)
Q Consensus 256 ~~~~~~~l~~pv~~----~~~i~~~~~~~~~~~ve~Gp~~--~l~~~~~~~~~ 302 (311)
.-|+..+..+||+| .++++.+.+.+.-+||.+|-.. -+..|-+.++.
T Consensus 9 Spyl~~ha~~~V~W~~w~~ea~~~Ak~e~KpIfl~ig~~~C~wChvM~~esf~ 61 (163)
T PF03190_consen 9 SPYLRQHAHNPVNWQPWGEEALEKAKKENKPIFLSIGYSWCHWCHVMERESFS 61 (163)
T ss_dssp -HHHHTTTTSSS--B-SSHHHHHHHHHHT--EEEEEE-TT-HHHHHHHHHTTT
T ss_pred CHHHHHhccCCCCcccCCHHHHHHHHhcCCcEEEEEEecCCcchhhhcccCcC
Confidence 46999999999999 6788888888888999999543 24444444443
No 86
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.79 E-value=1.4e+02 Score=26.26 Aligned_cols=37 Identities=14% Similarity=0.239 Sum_probs=30.7
Q ss_pred ceEEecccHHHHHHHHHhc-CCCHHHHHHHHHHHHHHH
Q 021568 93 VDVTCGLSLGEYTALAFAG-AFSFEDGLKLVKLRGAAM 129 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~ag-~~s~~d~~~l~~~r~~~~ 129 (311)
.|.+.|-|.|-+.|+..+- .++.+|++++....+..+
T Consensus 43 fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~~i 80 (309)
T cd07216 43 FDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAKKI 80 (309)
T ss_pred cCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhHHh
Confidence 4899999999999988874 689999998887766544
No 87
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=32.31 E-value=51 Score=29.72 Aligned_cols=29 Identities=31% Similarity=0.463 Sum_probs=19.0
Q ss_pred HHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
.+.|+..- |+ .--.++|||+|-|-|+..|
T Consensus 150 iE~WR~~~-~L----~KmilvGHSfGGYLaa~YA 178 (365)
T KOG4409|consen 150 IEQWRKKM-GL----EKMILVGHSFGGYLAAKYA 178 (365)
T ss_pred HHHHHHHc-CC----cceeEeeccchHHHHHHHH
Confidence 34455443 54 3447899999987776654
No 88
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=31.92 E-value=44 Score=28.07 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=21.6
Q ss_pred HHHHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 75 al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
-+...+++.. .+ .+.+.+++|+|+|-+.|+.++
T Consensus 101 el~p~i~~~~-~~--~~~~~~i~G~S~GG~~Al~~~ 133 (251)
T PF00756_consen 101 ELIPYIEANY-RT--DPDRRAIAGHSMGGYGALYLA 133 (251)
T ss_dssp HHHHHHHHHS-SE--EECCEEEEEETHHHHHHHHHH
T ss_pred cchhHHHHhc-cc--ccceeEEeccCCCcHHHHHHH
Confidence 3444555554 33 112259999999999999865
No 89
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=31.91 E-value=61 Score=29.52 Aligned_cols=29 Identities=34% Similarity=0.382 Sum_probs=20.6
Q ss_pred HHHHHHccCCCCccCCc-eEEecccHHHHHHHHHhc
Q 021568 77 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 77 ~~~l~~~~~gi~~~~~p-~~~~G~S~Ge~~A~~~ag 111 (311)
..++.+. |+ .+ ..++|||+|-..|+..+.
T Consensus 137 ~~~l~~l--~~----~~~~~lvG~S~Gg~ia~~~a~ 166 (379)
T PRK00175 137 ARLLDAL--GI----TRLAAVVGGSMGGMQALEWAI 166 (379)
T ss_pred HHHHHHh--CC----CCceEEEEECHHHHHHHHHHH
Confidence 3455666 55 45 489999999888877654
No 90
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=31.85 E-value=41 Score=25.12 Aligned_cols=20 Identities=25% Similarity=0.234 Sum_probs=16.5
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+-+++|||+|-..|+.++.
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEEEccCcHHHHHHhh
Confidence 56789999999888887665
No 91
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=30.22 E-value=66 Score=28.74 Aligned_cols=20 Identities=30% Similarity=0.312 Sum_probs=16.2
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+..++|||+|-+.|+.++.
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred ccEEEEeechHHHHHHHHHH
Confidence 56789999999988886654
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=29.66 E-value=35 Score=29.49 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=14.8
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+-+++|||+|-|-++=+-
T Consensus 84 ~~liLiGHSIGayi~levl 102 (266)
T PF10230_consen 84 VKLILIGHSIGAYIALEVL 102 (266)
T ss_pred CcEEEEeCcHHHHHHHHHH
Confidence 3458999999998877544
No 93
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=29.46 E-value=1.8e+02 Score=25.69 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 68 ~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
.+-.++-.+.-.+++.++-.. ...-..+.|.|+|-+++++++
T Consensus 154 ~~~~L~~eLlP~v~~~yp~~~-~a~~r~L~G~SlGG~vsL~ag 195 (299)
T COG2382 154 YWRFLAQELLPYVEERYPTSA-DADGRVLAGDSLGGLVSLYAG 195 (299)
T ss_pred HHHHHHHHhhhhhhccCcccc-cCCCcEEeccccccHHHHHHH
Confidence 334444455555665542111 111247999999999999876
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=28.75 E-value=42 Score=29.15 Aligned_cols=20 Identities=25% Similarity=-0.017 Sum_probs=16.4
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
..-.++|||+|-..|..++.
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGK 131 (275)
T ss_pred HHEEEEEecHHHHHHHHHHH
Confidence 45689999999998888764
No 95
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=28.38 E-value=71 Score=29.96 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=16.5
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
++..++|||+|-+.+.....
T Consensus 162 ~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCEEEEEECHhHHHHHHHHH
Confidence 68899999999888876553
No 96
>PRK10749 lysophospholipase L2; Provisional
Probab=27.74 E-value=83 Score=27.91 Aligned_cols=19 Identities=16% Similarity=0.081 Sum_probs=15.2
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.|-.++|||+|-..|+..+
T Consensus 131 ~~~~l~GhSmGG~ia~~~a 149 (330)
T PRK10749 131 RKRYALAHSMGGAILTLFL 149 (330)
T ss_pred CCeEEEEEcHHHHHHHHHH
Confidence 5788999999988776544
No 97
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=27.62 E-value=42 Score=28.22 Aligned_cols=23 Identities=22% Similarity=-0.000 Sum_probs=17.6
Q ss_pred CceEEecccHHHHHHHHHhcCCC
Q 021568 92 SVDVTCGLSLGEYTALAFAGAFS 114 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~~s 114 (311)
.+-.+.|||.|-.-|.+++...+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~ 106 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCD 106 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHcc
Confidence 34688999999888888775533
No 98
>PLN00215 predicted protein; Provisional
Probab=27.20 E-value=17 Score=24.79 Aligned_cols=15 Identities=27% Similarity=0.120 Sum_probs=11.4
Q ss_pred CCEEEEECCCCcchh
Q 021568 6 SLLLFYVLSQGAQAV 20 (311)
Q Consensus 6 ~~~~~~F~Gqg~~~~ 20 (311)
+..+-+.+|||.||.
T Consensus 52 rsaakmipgqggqwv 66 (110)
T PLN00215 52 RSAAKMIPGQGGQWV 66 (110)
T ss_pred hhhhhccCCCCCeEE
Confidence 345568899999995
No 99
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=27.07 E-value=50 Score=26.80 Aligned_cols=20 Identities=35% Similarity=0.400 Sum_probs=16.3
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+..++|||+|-..|+.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~ 84 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAA 84 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHH
Confidence 57789999999988877663
No 100
>PHA02857 monoglyceride lipase; Provisional
Probab=27.03 E-value=48 Score=28.25 Aligned_cols=20 Identities=20% Similarity=0.072 Sum_probs=16.3
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.|-.++|||+|-..|...+.
T Consensus 97 ~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 97 VPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCEEEEEcCchHHHHHHHHH
Confidence 57789999999988877663
No 101
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=26.88 E-value=56 Score=26.88 Aligned_cols=18 Identities=33% Similarity=0.377 Sum_probs=14.6
Q ss_pred ceEEecccHHHHHHHHHh
Q 021568 93 VDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (311)
|-.++|||+|-+-|.-+|
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 789999999987766554
No 102
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=26.75 E-value=82 Score=31.03 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=35.3
Q ss_pred HHHHHhhcCccch----HHHHHHHHHCCCCEEEEECCCh--hHHHHHHHhc
Q 021568 257 KILAQQVTSPVQW----ETTVKTLLGKGLKKSYELGPGK--VIAGIVKRLD 301 (311)
Q Consensus 257 ~~~~~~l~~pv~~----~~~i~~~~~~~~~~~ve~Gp~~--~l~~~~~~~~ 301 (311)
.|+.++..+||+| +++.+.+.+.+.-+|+.||-.. -+..|.++..
T Consensus 16 pYL~~ha~nPV~W~pW~~eAf~~A~~edkPIflSIGys~CHWChVM~~ESf 66 (667)
T COG1331 16 PYLLQHAHNPVDWYPWGEEAFAKAKEEDKPILLSIGYSTCHWCHVMAHESF 66 (667)
T ss_pred HHHHhccCCCccccccCHHHHHHHHHhCCCEEEEeccccccchHHHhhhcC
Confidence 5999999999999 7899999999889999999543 3444444443
No 103
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=25.88 E-value=74 Score=25.64 Aligned_cols=19 Identities=42% Similarity=0.426 Sum_probs=14.4
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+..++|||+|...+...+
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~ 106 (282)
T COG0596 88 EKVVLVGHSMGGAVALALA 106 (282)
T ss_pred CceEEEEecccHHHHHHHH
Confidence 4578999999966666554
No 104
>PF10369 ALS_ss_C: Small subunit of acetolactate synthase; InterPro: IPR019455 This entry represents the C-terminal domain of the small subunit of acetolactate synthase (the N-terminal domain being an ACT domain). Acetolactate synthase is a tetrameric enzyme, composed of two large and two small subunits, which catalyses the first step in branched-chain amino acid biosynthesis. This reaction is sensitive to certain herbicides []. ; PDB: 2F1F_B 2FGC_A 2PC6_A.
Probab=25.84 E-value=1.7e+02 Score=19.69 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccccCCCCceEEEeecCCCcEE--EEcChhhHHHHHHHHHhcCCC
Q 021568 148 SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYA--VSGGVKGIEAVEAKAKSFKAR 201 (311)
Q Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~v--vsG~~~~l~~l~~~l~~~~~~ 201 (311)
..++.++++.|+. .|.-+ +++.++ ++|+++.++.+.+.++.++..
T Consensus 16 r~ei~~l~~~f~a--------~ivd~-~~~~~iie~tG~~~kid~fi~~l~~~gi~ 62 (75)
T PF10369_consen 16 RSEILQLAEIFRA--------RIVDV-SPDSIIIELTGTPEKIDAFIKLLKPFGIL 62 (75)
T ss_dssp HHHHHHHHHHTT---------EEEEE-ETTEEEEEEEE-HHHHHHHHHHSTGGGEE
T ss_pred HHHHHHHHHHhCC--------EEEEE-CCCEEEEEEcCCHHHHHHHHHHhhhcCCE
Confidence 3567778887753 33333 344444 489999999999999887643
No 105
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=25.66 E-value=35 Score=29.84 Aligned_cols=24 Identities=21% Similarity=0.210 Sum_probs=17.3
Q ss_pred CceEEecccHHHHHHHHHhcCCCH
Q 021568 92 SVDVTCGLSLGEYTALAFAGAFSF 115 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~~s~ 115 (311)
.+-+++|||+|--.|++.+-.-.+
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~l 169 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTL 169 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhc
Confidence 456899999997777776644333
No 106
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=25.50 E-value=76 Score=25.89 Aligned_cols=32 Identities=38% Similarity=0.288 Sum_probs=21.5
Q ss_pred HHHHHHHHccCCCCccCCce--EEecccHHHHHHHHHhc
Q 021568 75 AAVELLRARDGGQQIIDSVD--VTCGLSLGEYTALAFAG 111 (311)
Q Consensus 75 al~~~l~~~~~gi~~~~~p~--~~~G~S~Ge~~A~~~ag 111 (311)
+..+.+.+.+ .+ .|+ .++|+|.|-+.++.++.
T Consensus 50 ~~i~~l~~~~-~i----D~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 50 AAIEYLIKQY-YI----DPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHTT-SE----EEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHhccc-cc----cceeEEEEcccccccccchhhc
Confidence 3445555553 33 344 78999999988887765
No 107
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=25.24 E-value=87 Score=27.58 Aligned_cols=19 Identities=26% Similarity=0.256 Sum_probs=14.8
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.|-+++|||+|-+.|+...
T Consensus 107 ~p~~l~gHSmGg~Ia~~~~ 125 (298)
T COG2267 107 LPVFLLGHSMGGLIALLYL 125 (298)
T ss_pred CCeEEEEeCcHHHHHHHHH
Confidence 6889999999976666543
No 108
>PLN03219 uncharacterized protein; Provisional
Probab=25.23 E-value=76 Score=23.24 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=19.2
Q ss_pred hhccHHHHHHHHHHHHhhCCC
Q 021568 26 AQSVPAAAELYKKANDILGFD 46 (311)
Q Consensus 26 l~~~p~~~~~~~~~~~~l~~~ 46 (311)
|.++|.|+++++++.+.+|++
T Consensus 63 yL~hP~F~~LL~~AeEEfGf~ 83 (108)
T PLN03219 63 YLNHPLFREFLNRAEEECGFH 83 (108)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999999885
No 109
>PLN03220 uncharacterized protein; Provisional
Probab=25.18 E-value=78 Score=23.05 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=19.2
Q ss_pred hhccHHHHHHHHHHHHhhCCC
Q 021568 26 AQSVPAAAELYKKANDILGFD 46 (311)
Q Consensus 26 l~~~p~~~~~~~~~~~~l~~~ 46 (311)
|.++|.|+++++.+.+-+|++
T Consensus 61 yL~hP~F~~LL~~AeEEfGf~ 81 (105)
T PLN03220 61 FLNHPSFKEFLSRAEEEFGFN 81 (105)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999999885
No 110
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=24.95 E-value=95 Score=27.11 Aligned_cols=21 Identities=33% Similarity=0.270 Sum_probs=16.5
Q ss_pred CceEEecccHHHHHHHHHhcC
Q 021568 92 SVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
.+..++|||+|-..++..+..
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~ 115 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQT 115 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHH
Confidence 567899999998887776643
No 111
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=24.40 E-value=85 Score=28.09 Aligned_cols=21 Identities=33% Similarity=0.218 Sum_probs=17.6
Q ss_pred CceEEecccHHHHHHHHHhcC
Q 021568 92 SVDVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag~ 112 (311)
.|..++|||+|-+.|...|..
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHh
Confidence 678899999999888886643
No 112
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=24.35 E-value=83 Score=25.92 Aligned_cols=32 Identities=34% Similarity=0.520 Sum_probs=20.8
Q ss_pred HHHHHHHHccCCCCccCCceEEecccHHHHHHHHHh
Q 021568 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 75 al~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (311)
+..+.+++..+.. ....+.|+|+|.+.|.-++
T Consensus 90 aaldW~~~~hp~s----~~~~l~GfSFGa~Ia~~la 121 (210)
T COG2945 90 AALDWLQARHPDS----ASCWLAGFSFGAYIAMQLA 121 (210)
T ss_pred HHHHHHHhhCCCc----hhhhhcccchHHHHHHHHH
Confidence 3445666664332 2236899999998887766
No 113
>PRK03204 haloalkane dehalogenase; Provisional
Probab=24.30 E-value=87 Score=27.09 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=14.7
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+..++|||+|-..|...+
T Consensus 101 ~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred CCEEEEEECccHHHHHHHH
Confidence 6788999999987665544
No 114
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.13 E-value=54 Score=32.91 Aligned_cols=21 Identities=24% Similarity=0.102 Sum_probs=16.7
Q ss_pred ceEEecccHHHHHHHHHhcCC
Q 021568 93 VDVTCGLSLGEYTALAFAGAF 113 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~ag~~ 113 (311)
..+++|||+|-+.|-+....-
T Consensus 183 sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred eEEEEeccchhHHHHHHHhhh
Confidence 358999999999988876544
No 115
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=24.12 E-value=3.9e+02 Score=21.57 Aligned_cols=19 Identities=21% Similarity=-0.008 Sum_probs=15.2
Q ss_pred ceEEecccHHHHHHHHHhc
Q 021568 93 VDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~ag 111 (311)
...++|||-|-..+..++.
T Consensus 110 ~~tv~GHSYGS~v~G~A~~ 128 (177)
T PF06259_consen 110 HLTVVGHSYGSTVVGLAAQ 128 (177)
T ss_pred CEEEEEecchhHHHHHHhh
Confidence 3479999999988887663
No 116
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=24.11 E-value=85 Score=26.87 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHccCCCCccCCceEEecccHHH
Q 021568 32 AAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGE 103 (311)
Q Consensus 32 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~~gi~~~~~p~~~~G~S~Ge 103 (311)
.|.+++.+.+. |+.+..+-. .-.++....+.....-+.-++ +.+.+.+ +......|.+-+|||+|-
T Consensus 36 Yr~lLe~La~~-Gy~ViAtPy---~~tfDH~~~A~~~~~~f~~~~-~~L~~~~-~~~~~~lP~~~vGHSlGc 101 (250)
T PF07082_consen 36 YRYLLERLADR-GYAVIATPY---VVTFDHQAIAREVWERFERCL-RALQKRG-GLDPAYLPVYGVGHSLGC 101 (250)
T ss_pred HHHHHHHHHhC-CcEEEEEec---CCCCcHHHHHHHHHHHHHHHH-HHHHHhc-CCCcccCCeeeeecccch
Confidence 35566665543 443332111 112334344444444444444 3344332 332122477889999995
No 117
>cd04436 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGAP (GTPase-activator protein) Rgd2-like proteins. Rgd2-like proteins share a common domain architecture, containing, beside the RhoGAP domain, a DEP and a FCH (Fes/CIP4 homology) domain. Yeast Rgd2 is a GAP protein for Cdc42 and Rho5.
Probab=24.03 E-value=1.9e+02 Score=20.18 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=31.7
Q ss_pred HHHHHHHhcCCCCCCCccEEEccCCCCCCChHHHHHHHHHhhcC
Q 021568 222 SRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTS 265 (311)
Q Consensus 222 ~~~~~~l~~~~~~~p~~pv~s~~~g~~~~~~~~~~~~~~~~l~~ 265 (311)
+-+...+..++..+-++|++..+. -..+++.+.+++.+++-.
T Consensus 4 ~lL~~ml~~ip~~~~kvPilGty~--nt~sG~~Iv~~L~~n~~~ 45 (84)
T cd04436 4 ELLAAMLKEIPLADYKVPILGTYQ--NTSSGSEIVSWLQENMPE 45 (84)
T ss_pred HHHHHHHHhCCCccceeccccccc--CcccHHHHHHHHHHcCCC
Confidence 345567788888889999988654 345677888898888876
No 118
>PLN02872 triacylglycerol lipase
Probab=23.76 E-value=1.5e+02 Score=27.33 Aligned_cols=19 Identities=32% Similarity=0.190 Sum_probs=15.6
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+-.++|||+|-..++++.
T Consensus 160 ~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 160 SKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred CceEEEEECHHHHHHHHHh
Confidence 5678999999998888655
No 119
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=23.39 E-value=56 Score=29.22 Aligned_cols=19 Identities=26% Similarity=0.239 Sum_probs=15.2
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+..++|||+|-..|+.++
T Consensus 162 ~~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVH 180 (349)
T ss_pred CCEEEEEeccchHHHHHHH
Confidence 4679999999988777654
No 120
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=23.38 E-value=54 Score=28.95 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=15.3
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.|-.++|||+|-..|+.++
T Consensus 134 ~~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIH 152 (330)
T ss_pred CCEEEEEecchhHHHHHHH
Confidence 4679999999988887654
No 121
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=23.17 E-value=48 Score=29.61 Aligned_cols=17 Identities=35% Similarity=0.305 Sum_probs=13.6
Q ss_pred CceEEecccHHHHHHHH
Q 021568 92 SVDVTCGLSLGEYTALA 108 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~ 108 (311)
.|-+++|||+|-..++.
T Consensus 142 ~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALR 158 (332)
T ss_pred CceeEeeccCccHHHHH
Confidence 57899999999766554
No 122
>PRK06489 hypothetical protein; Provisional
Probab=23.08 E-value=1e+02 Score=27.77 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=14.3
Q ss_pred eEEecccHHHHHHHHHhc
Q 021568 94 DVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 94 ~~~~G~S~Ge~~A~~~ag 111 (311)
..++|||+|-..|+..+.
T Consensus 156 ~~lvG~SmGG~vAl~~A~ 173 (360)
T PRK06489 156 RLILGTSMGGMHAWMWGE 173 (360)
T ss_pred eEEEEECHHHHHHHHHHH
Confidence 358999999888887653
No 123
>PLN03090 auxin-responsive family protein; Provisional
Probab=22.93 E-value=90 Score=22.77 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.9
Q ss_pred hhccHHHHHHHHHHHHhhCCC
Q 021568 26 AQSVPAAAELYKKANDILGFD 46 (311)
Q Consensus 26 l~~~p~~~~~~~~~~~~l~~~ 46 (311)
|.++|.|++.++.+.+-+|++
T Consensus 62 ~L~hP~F~~LL~~aeeEfGf~ 82 (104)
T PLN03090 62 FLTHPEFQSLLQQAEEEFGFD 82 (104)
T ss_pred HcCCHHHHHHHHHHHHHhCCC
Confidence 678999999999999988875
No 124
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=22.76 E-value=95 Score=29.54 Aligned_cols=20 Identities=35% Similarity=0.140 Sum_probs=16.7
Q ss_pred CceEEecccHHHHHHHHHhc
Q 021568 92 SVDVTCGLSLGEYTALAFAG 111 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ag 111 (311)
.+..++|||+|-+.|+..+.
T Consensus 274 ~k~~LVGhSmGG~iAl~~A~ 293 (481)
T PLN03087 274 KSFHIVAHSLGCILALALAV 293 (481)
T ss_pred CCEEEEEECHHHHHHHHHHH
Confidence 67889999999988887664
No 125
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=22.29 E-value=1.7e+02 Score=27.44 Aligned_cols=19 Identities=26% Similarity=0.058 Sum_probs=16.0
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
....++|||+|--.|..++
T Consensus 119 ~~VhLIGHSLGAhIAg~ag 137 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAG 137 (442)
T ss_pred CcEEEEEECHHHHHHHHHH
Confidence 5668999999998888865
No 126
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=22.20 E-value=1.2e+02 Score=26.12 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=16.7
Q ss_pred HHHHccCCCCccCCceEEecccHHHHHHHHH
Q 021568 79 LLRARDGGQQIIDSVDVTCGLSLGEYTALAF 109 (311)
Q Consensus 79 ~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ 109 (311)
.|.+.. ++ +---++|||+|-+++.+.
T Consensus 95 ~L~~~Y-~~----~~~N~VGHSmGg~~~~~y 120 (255)
T PF06028_consen 95 YLKKKY-HF----KKFNLVGHSMGGLSWTYY 120 (255)
T ss_dssp HHHHCC-------SEEEEEEETHHHHHHHHH
T ss_pred HHHHhc-CC----CEEeEEEECccHHHHHHH
Confidence 445544 66 444688999998888764
No 127
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=22.06 E-value=2.3e+02 Score=25.35 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=15.9
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
+-..++||..|-+.|...+
T Consensus 113 ~k~~lvgHDwGaivaw~la 131 (322)
T KOG4178|consen 113 KKAFLVGHDWGAIVAWRLA 131 (322)
T ss_pred ceeEEEeccchhHHHHHHH
Confidence 5678999999999887755
No 128
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=22.03 E-value=70 Score=27.24 Aligned_cols=12 Identities=25% Similarity=0.152 Sum_probs=10.7
Q ss_pred CceEEecccHHH
Q 021568 92 SVDVTCGLSLGE 103 (311)
Q Consensus 92 ~p~~~~G~S~Ge 103 (311)
.|.+++|||+|-
T Consensus 105 ~P~y~vgHS~GG 116 (281)
T COG4757 105 HPLYFVGHSFGG 116 (281)
T ss_pred CceEEeeccccc
Confidence 699999999974
No 129
>KOG2439 consensus Nuclear architecture related protein [Nuclear structure]
Probab=21.59 E-value=2e+02 Score=26.53 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=19.0
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHH
Q 021568 104 YTALAFAGAFSFEDGLKLVKLRGAAM 129 (311)
Q Consensus 104 ~~A~~~ag~~s~~d~~~l~~~r~~~~ 129 (311)
-=|++|+|.++-++.+.+-..-...+
T Consensus 62 sDCLACSGCITSaEtVlls~Qs~~~~ 87 (459)
T KOG2439|consen 62 SDCLACSGCITSAETVLLSEQSHKEF 87 (459)
T ss_pred HhhhhccCccchhhhhhhhhhhHHHH
Confidence 34789999999999888765444333
No 130
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=21.58 E-value=1.1e+02 Score=22.16 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=19.1
Q ss_pred HhhccHHHHHHHHHHHHhhCCC
Q 021568 25 EAQSVPAAAELYKKANDILGFD 46 (311)
Q Consensus 25 ~l~~~p~~~~~~~~~~~~l~~~ 46 (311)
.|.++|.|+++++.+.+.+|++
T Consensus 57 ~~L~hp~f~~LL~~aeeEfG~~ 78 (100)
T PF02519_consen 57 SYLNHPLFQELLEQAEEEFGFD 78 (100)
T ss_pred HHcCchhHHHHHHHHhhhcCcC
Confidence 3678999999999999988775
No 131
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=21.47 E-value=3.3e+02 Score=24.55 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=42.3
Q ss_pred CCCEEEEECCC-CcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCC-ccccccCcchhhHHHHHHHHH-HHHHH
Q 021568 5 RSLLLFYVLSQ-GAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGP-KEKLDSTIISQPAIYVTSLAA-VELLR 81 (311)
Q Consensus 5 ~~~~~~~F~Gq-g~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~q~al-~~~l~ 81 (311)
+.|.+.+|.|- |+. ++|.+|...+++.+ -|+...-.-.++. .+....+..-+.+.+ ..++. .+.++
T Consensus 74 ~~P~vVl~HGL~G~s---------~s~y~r~L~~~~~~-rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t-~D~~~~l~~l~ 142 (345)
T COG0429 74 KKPLVVLFHGLEGSS---------NSPYARGLMRALSR-RGWLVVVFHFRGCSGEANTSPRLYHSGET-EDIRFFLDWLK 142 (345)
T ss_pred CCceEEEEeccCCCC---------cCHHHHHHHHHHHh-cCCeEEEEecccccCCcccCcceecccch-hHHHHHHHHHH
Confidence 45788888885 333 35666666665543 2332211111221 111122233333333 33332 23445
Q ss_pred HccCCCCccCCceEEecccHHH-HHHHH
Q 021568 82 ARDGGQQIIDSVDVTCGLSLGE-YTALA 108 (311)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge-~~A~~ 108 (311)
..+ .+.|-+.+|.|+|- .-|.+
T Consensus 143 ~~~-----~~r~~~avG~SLGgnmLa~y 165 (345)
T COG0429 143 ARF-----PPRPLYAVGFSLGGNMLANY 165 (345)
T ss_pred HhC-----CCCceEEEEecccHHHHHHH
Confidence 543 22788999999996 44443
No 132
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=21.24 E-value=34 Score=30.38 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=15.5
Q ss_pred eEEecccHHHHHHHHHhcC
Q 021568 94 DVTCGLSLGEYTALAFAGA 112 (311)
Q Consensus 94 ~~~~G~S~Ge~~A~~~ag~ 112 (311)
.+++|||+|--+++..++.
T Consensus 243 ~aViGHSFGgAT~i~~ss~ 261 (399)
T KOG3847|consen 243 AAVIGHSFGGATSIASSSS 261 (399)
T ss_pred hhheeccccchhhhhhhcc
Confidence 4689999998888887764
No 133
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=21.23 E-value=1.1e+02 Score=27.38 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=15.1
Q ss_pred CceEEecccHHHHHHHHHh
Q 021568 92 SVDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (311)
.+-.++|||+|-..++..+
T Consensus 136 ~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYA 154 (350)
T ss_pred CcccEEEECHHHHHHHHHH
Confidence 5678999999987776654
No 134
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=20.67 E-value=3.4e+02 Score=19.62 Aligned_cols=71 Identities=14% Similarity=0.203 Sum_probs=42.9
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcC---CC---HHHHHHHHHHhccccCCCCceEEEeecCCCcEEE
Q 021568 108 AFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIG---LD---SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAV 181 (311)
Q Consensus 108 ~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~---~~---~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~vv 181 (311)
+.+|-++.+.+..+-..|...+... +---+.+.+ ++ -.-+..+++..++ ..+.+.+
T Consensus 15 ~LsGeL~r~tl~~lw~~r~~~~~~~----~~~~idLs~v~rvDSaglALL~~~~~~~k~--------------~g~~~~L 76 (99)
T COG3113 15 VLSGELDRDTLLPLWSQREAQLKQL----DTVRIDLSGVSRVDSAGLALLLHLIRLAKK--------------QGNAVTL 76 (99)
T ss_pred EEeccccHHHHHHHHHHHHHHcccc----CeEEEehhhcceechHHHHHHHHHHHHHHH--------------cCCeeEE
Confidence 4578899999999999888776653 111111111 12 1334445544332 1246778
Q ss_pred EcChhhHHHHHHHHH
Q 021568 182 SGGVKGIEAVEAKAK 196 (311)
Q Consensus 182 sG~~~~l~~l~~~l~ 196 (311)
+|.|+.+..+.+..+
T Consensus 77 ~~~p~~L~tLa~Ly~ 91 (99)
T COG3113 77 TGVPEQLRTLAELYN 91 (99)
T ss_pred ecCcHHHHHHHHHhC
Confidence 999999988877643
No 135
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=20.56 E-value=1.7e+02 Score=24.38 Aligned_cols=15 Identities=20% Similarity=0.140 Sum_probs=12.3
Q ss_pred CceEEecccHHHHHH
Q 021568 92 SVDVTCGLSLGEYTA 106 (311)
Q Consensus 92 ~p~~~~G~S~Ge~~A 106 (311)
+|=+++|||.|-.-.
T Consensus 95 RPfILaGHSQGs~~l 109 (207)
T PF11288_consen 95 RPFILAGHSQGSMHL 109 (207)
T ss_pred CCEEEEEeChHHHHH
Confidence 799999999995443
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=20.48 E-value=79 Score=29.35 Aligned_cols=18 Identities=33% Similarity=0.370 Sum_probs=15.8
Q ss_pred ceEEecccHHHHHHHHHh
Q 021568 93 VDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (311)
..+++|+|+|-+.|++++
T Consensus 289 ~~~IaG~S~GGl~AL~~a 306 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAG 306 (411)
T ss_pred ceEEEEEChHHHHHHHHH
Confidence 358999999999999876
No 137
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.41 E-value=1.2e+02 Score=27.51 Aligned_cols=29 Identities=24% Similarity=0.277 Sum_probs=18.9
Q ss_pred HHHHHHHccCCCCccCCceEEecccHHHHHHHH
Q 021568 76 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALA 108 (311)
Q Consensus 76 l~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~ 108 (311)
|++.+.+...|- +|-.++|||+|--.-.+
T Consensus 208 LA~~L~~~~~G~----RpVtLvG~SLGarvI~~ 236 (345)
T PF05277_consen 208 LADALLSRNQGE----RPVTLVGHSLGARVIYY 236 (345)
T ss_pred HHHHHHHhcCCC----CceEEEeecccHHHHHH
Confidence 455555442254 79999999999644443
No 138
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=20.13 E-value=90 Score=25.40 Aligned_cols=18 Identities=39% Similarity=0.351 Sum_probs=15.5
Q ss_pred ceEEecccHHHHHHHHHh
Q 021568 93 VDVTCGLSLGEYTALAFA 110 (311)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (311)
...++|.|+|-+-|.+.+
T Consensus 60 ~~~liGSSlGG~~A~~La 77 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLA 77 (187)
T ss_pred CeEEEEEChHHHHHHHHH
Confidence 368999999999998875
Done!