Query 021573
Match_columns 310
No_of_seqs 82 out of 84
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 06:06:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b9w_A Protein (merozoite surf 92.0 0.055 1.9E-06 43.5 1.7 33 95-127 11-48 (95)
2 1ob1_C Major merozoite surface 91.8 0.07 2.4E-06 43.2 2.0 32 94-125 10-46 (99)
3 1n1i_A Merozoite surface prote 89.5 0.13 4.6E-06 41.9 1.8 29 95-123 17-50 (105)
4 2ch0_A Inner nuclear membrane 87.1 0.024 8.3E-07 48.0 -4.2 38 253-290 5-46 (133)
5 2ktc_A Potassium channel toxin 59.8 1 3.4E-05 29.7 -1.3 22 92-113 4-32 (34)
6 1g1s_A P-selectin; selectin, l 56.2 2.8 9.6E-05 34.1 0.4 29 95-125 126-158 (162)
7 1g1t_A E-selectin; EGF, adhesi 53.5 2.9 0.0001 33.6 0.1 28 94-123 125-156 (157)
8 2k2s_B Micronemal protein 6; m 52.5 3 0.0001 30.3 0.1 28 95-123 18-51 (61)
9 3cfw_A L-selectin; EGF, cell a 50.8 5.8 0.0002 32.2 1.5 31 94-126 125-159 (164)
10 1a3p_A Epidermal growth factor 50.1 7.5 0.00026 25.7 1.7 27 95-123 10-42 (45)
11 2kl7_A Fibulin-4; secreted, ca 49.4 5.9 0.0002 29.2 1.2 14 108-121 56-70 (71)
12 1ccv_A AMCI, chymotrypsin inhi 49.0 5.9 0.0002 27.7 1.1 24 100-124 30-54 (56)
13 2a55_A C4B-binding protein; co 47.7 11 0.00039 30.1 2.8 49 72-124 44-111 (133)
14 2w84_A Peroxisomal membrane pr 47.7 11 0.00039 28.5 2.6 22 169-190 38-59 (70)
15 1gl4_A Nidogen-1, entactin; im 46.4 7.7 0.00026 36.4 1.8 35 91-125 6-48 (285)
16 2bou_A EGF-like module contain 46.1 11 0.00039 30.1 2.6 27 95-121 8-42 (143)
17 1emn_A Fibrillin; extracellula 45.2 11 0.00037 27.8 2.2 26 95-121 13-42 (82)
18 1acw_A Natural scorpion peptid 45.0 2.2 7.5E-05 27.2 -1.4 20 92-111 2-28 (29)
19 1srz_A Gamma-aminobutyric acid 44.4 7.6 0.00026 27.5 1.1 17 107-124 37-56 (68)
20 2yra_A Seizure 6-like protein 42.6 9.2 0.00032 27.4 1.4 18 107-124 34-54 (74)
21 2ehf_A CUB and sushi domain-co 41.8 9.4 0.00032 27.4 1.3 18 107-124 38-58 (73)
22 3ff5_A PEX14P, peroxisomal bio 41.7 12 0.00041 27.0 1.8 21 170-190 34-54 (54)
23 4aqb_A Mannan-binding lectin s 41.6 11 0.00038 34.6 2.1 30 95-124 286-334 (361)
24 1edm_B Factor IX; epidermal gr 41.6 10 0.00035 24.0 1.3 26 94-121 9-38 (39)
25 2knc_B Integrin beta-3; transm 39.7 73 0.0025 24.1 6.1 37 255-291 38-74 (79)
26 1hae_A Heregulin-alpha; growth 37.1 13 0.00045 26.2 1.4 27 95-123 13-48 (63)
27 2gy5_A Angiopoietin-1 receptor 34.4 18 0.00063 34.9 2.4 29 92-122 201-231 (423)
28 1egf_A Epidermal growth factor 32.8 28 0.00096 23.7 2.5 27 95-123 13-45 (53)
29 1hvw_A Omega-ACTX-HV1A, omega- 31.1 25 0.00086 21.9 1.7 13 94-106 6-18 (26)
30 2vj3_A Neurogenic locus notch 30.0 20 0.00069 28.5 1.6 27 95-123 14-44 (135)
31 2aty_A Complement receptor chi 29.9 30 0.001 31.6 2.9 50 72-124 41-117 (376)
32 2zjs_E Preprotein translocase 29.3 62 0.0021 23.0 3.9 30 36-65 18-47 (60)
33 1tpg_A T-plasminogen activator 28.9 34 0.0011 25.7 2.6 28 95-124 55-88 (91)
34 4d90_A EGF-like repeat and dis 28.9 21 0.00071 28.2 1.5 31 91-123 53-96 (143)
35 2p28_B Integrin beta-2; hybrid 27.6 29 0.00098 30.8 2.3 26 95-122 187-214 (217)
36 2ygo_A WIF-1, WNT inhibitory f 26.0 41 0.0014 29.7 3.0 31 91-123 149-181 (188)
37 1ly2_A CD21, complement recept 25.6 24 0.0008 27.5 1.2 18 107-124 97-117 (130)
38 3h5c_B Vitamin K-dependent pro 25.2 33 0.0011 30.7 2.3 27 95-123 12-42 (317)
39 3k6s_B Integrin beta-2; cell r 24.8 42 0.0015 34.8 3.3 26 95-122 567-592 (687)
40 3hrz_D Complement factor B; se 24.8 41 0.0014 33.6 3.1 43 72-117 115-174 (741)
41 1z1y_A Ookinete surface protei 24.4 17 0.00059 30.3 0.2 28 95-122 55-91 (186)
42 2jwa_A Receptor tyrosine-prote 24.2 61 0.0021 22.4 2.9 12 242-253 23-34 (44)
43 1ntl_A CRRY-IG; immunology, co 24.1 44 0.0015 32.5 3.1 46 72-117 170-235 (551)
44 1gkn_A Complement receptor typ 24.0 24 0.00082 27.7 1.0 50 73-125 45-113 (128)
45 2ygq_A WIF-1, WNT inhibitory f 23.9 38 0.0013 31.4 2.5 26 95-122 154-180 (324)
46 1hx2_A BSTI; beta-sheet disulf 23.9 33 0.0011 23.9 1.6 23 101-124 33-58 (60)
47 1apq_A Complement protease C1R 23.8 37 0.0013 22.4 1.8 23 100-122 24-52 (53)
48 4ayi_A H factor 1, complement 23.3 29 0.001 27.3 1.4 18 107-124 37-60 (125)
49 1rh5_B Preprotein translocase 22.8 1.2E+02 0.004 22.9 4.6 15 40-54 29-43 (74)
50 2ddu_A Reelin; beta-jelly-roll 22.8 25 0.00084 34.4 1.0 31 95-125 197-227 (387)
51 1pvz_A K+ toxin-like peptide; 22.7 26 0.00089 22.5 0.8 18 92-109 12-30 (31)
52 1gkg_A Complement receptor typ 22.4 27 0.00092 27.6 1.0 19 107-125 32-53 (136)
53 1x7a_L Coagulation factor IX, 22.4 33 0.0011 28.0 1.6 27 95-123 55-85 (146)
54 1uzk_A Fibrillin-1; glycoprote 22.2 33 0.0011 27.9 1.6 26 95-121 11-42 (162)
55 1yo8_A Thrombospondin-2; EGF, 22.1 34 0.0012 35.2 1.9 32 95-126 111-150 (634)
56 1axh_A Atracotoxin-HVI, ACTX-H 22.1 30 0.001 23.1 1.0 16 91-106 6-21 (37)
57 3fcs_B Integrin beta-3; beta p 21.5 43 0.0015 34.7 2.5 39 72-121 516-559 (690)
58 1h03_P Complement decay-accele 20.3 28 0.00096 27.0 0.7 18 107-124 28-48 (125)
No 1
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=92.05 E-value=0.055 Score=43.47 Aligned_cols=33 Identities=21% Similarity=0.622 Sum_probs=28.5
Q ss_pred cCCCCccccC---C-e-eeecCCceecCCccccCchhh
Q 021573 95 PCPSNGECHQ---G-K-LECFHGYRKHGKLCVEDGDIN 127 (310)
Q Consensus 95 PCP~nA~C~~---g-~-v~C~~Gyvl~~~~Cv~D~ek~ 127 (310)
.||+||.||. | + -+|-.||++.+.+||+|.+..
T Consensus 11 kcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~ 48 (95)
T 1b9w_A 11 NVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMT 48 (95)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCC
T ss_pred CCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCC
Confidence 7999999997 3 2 599999999999999998543
No 2
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=91.77 E-value=0.07 Score=43.16 Aligned_cols=32 Identities=31% Similarity=0.925 Sum_probs=27.5
Q ss_pred ccCCCCccccC---Ce--eeecCCceecCCccccCch
Q 021573 94 EPCPSNGECHQ---GK--LECFHGYRKHGKLCVEDGD 125 (310)
Q Consensus 94 ePCP~nA~C~~---g~--v~C~~Gyvl~~~~Cv~D~e 125 (310)
.-||+||.|+. |. -+|..||...+.+|+++.+
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~ 46 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPN 46 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSC
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCC
Confidence 36899999998 42 4999999999999999863
No 3
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=89.54 E-value=0.13 Score=41.94 Aligned_cols=29 Identities=31% Similarity=0.830 Sum_probs=26.0
Q ss_pred cCCCCccccC---C-e-eeecCCceecCCccccC
Q 021573 95 PCPSNGECHQ---G-K-LECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~~---g-~-v~C~~Gyvl~~~~Cv~D 123 (310)
-||+||.|+. | . -+|..||+..+.+|+++
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~ 50 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA 50 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC
Confidence 6999999997 4 3 59999999999999998
No 4
>2ch0_A Inner nuclear membrane protein MAN1; winged helix motif, DNA, nuclear protein; NMR {Homo sapiens}
Probab=87.09 E-value=0.024 Score=48.03 Aligned_cols=38 Identities=0% Similarity=0.038 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhccCCchhhhhcc----chhh
Q 021573 253 WKVHRRRYFAIRVEELYHQVYNPFFPPLSRSMVS----SFLI 290 (310)
Q Consensus 253 ~~i~~rra~~aRv~eLv~~v~drL~~~a~~~~~~----~~~~ 290 (310)
+++++++.+.+||.+||++++|+|++++..|... |||+
T Consensus 5 ~r~~k~~ee~~~v~~LV~~Iid~L~~q~~~~~e~~~~~p~l~ 46 (133)
T 2ch0_A 5 FRWTKEEEETRQMYDMVVKIIDVLRSHNEACQENKDLQPYMP 46 (133)
T ss_dssp CCCSTHHHHHTTTTTTHHHHHHHHHHHHHHHTTSSCSCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcee
Confidence 4567788999999999999999999999887654 6664
No 5
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=59.75 E-value=1 Score=29.65 Aligned_cols=22 Identities=27% Similarity=0.744 Sum_probs=16.8
Q ss_pred CCccCCCC-------ccccCCeeeecCCc
Q 021573 92 SCEPCPSN-------GECHQGKLECFHGY 113 (310)
Q Consensus 92 ~CePCP~n-------A~C~~g~v~C~~Gy 113 (310)
.||-||.| +.|.+|...|+.|-
T Consensus 4 gCEeCP~HCk~k~A~~tCdn~~C~Cn~~~ 32 (34)
T 2ktc_A 4 GCAECPMHCKGKMAKPTCENEVCKCNIGK 32 (34)
T ss_dssp HHHHHHHTCCTTCCCEEEETTEEEECTTC
T ss_pred ccccChhhhccccccccccCCeEecccCC
Confidence 48888876 56888888888774
No 6
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=56.19 E-value=2.8 Score=34.08 Aligned_cols=29 Identities=31% Similarity=0.796 Sum_probs=23.2
Q ss_pred cCCCCccccCC--e--eeecCCceecCCccccCch
Q 021573 95 PCPSNGECHQG--K--LECFHGYRKHGKLCVEDGD 125 (310)
Q Consensus 95 PCP~nA~C~~g--~--v~C~~Gyvl~~~~Cv~D~e 125 (310)
||..+|.|.++ . -.|.+||. |..|+.+.+
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~--G~~Ce~~~~ 158 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFY--GPECEYVRD 158 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEE--STTSCEECC
T ss_pred CCCCCCEEecCCCCceEeCCCCCc--CcccccCcc
Confidence 68888999986 2 39999999 567987753
No 7
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=53.52 E-value=2.9 Score=33.61 Aligned_cols=28 Identities=29% Similarity=0.755 Sum_probs=22.3
Q ss_pred ccCCCCccccCC--ee--eecCCceecCCccccC
Q 021573 94 EPCPSNGECHQG--KL--ECFHGYRKHGKLCVED 123 (310)
Q Consensus 94 ePCP~nA~C~~g--~v--~C~~Gyvl~~~~Cv~D 123 (310)
.||+.+|.|.++ .. .|.+||. ++.|+-|
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~--g~~Ce~~ 156 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFS--GLKCEQI 156 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEE--STTSCEE
T ss_pred CCCCCCCEeecCCCCeeEECCCCcc--Ccccccc
Confidence 479999999987 23 8999998 7788754
No 8
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=52.54 E-value=3 Score=30.29 Aligned_cols=28 Identities=29% Similarity=0.668 Sum_probs=19.7
Q ss_pred cCCCC--ccccCC--e--eeecCCceecCCccccC
Q 021573 95 PCPSN--GECHQG--K--LECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~n--A~C~~g--~--v~C~~Gyvl~~~~Cv~D 123 (310)
||..+ |.|.+. . -.|.+||.. +..|+.+
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~~-G~~C~~~ 51 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYRI-SLDGTGN 51 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEEE-EECSSSC
T ss_pred CCcCCCccccccCCCceEeECCCCCcc-CCCCCCC
Confidence 78777 799874 2 499999963 4456543
No 9
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=50.76 E-value=5.8 Score=32.19 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=22.8
Q ss_pred ccCCCCccccCC----eeeecCCceecCCccccCchh
Q 021573 94 EPCPSNGECHQG----KLECFHGYRKHGKLCVEDGDI 126 (310)
Q Consensus 94 ePCP~nA~C~~g----~v~C~~Gyvl~~~~Cv~D~ek 126 (310)
.+|+.+|.|.++ ...|.+||. +..|+.+.+=
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~--g~~C~~~~~c 159 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY--GPQCQFVQVD 159 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB--SSSSCBC---
T ss_pred CcCCCCCeecccCCCceeeeCCCcc--cccccccccC
Confidence 589999999953 359999997 5689877643
No 10
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=50.10 E-value=7.5 Score=25.74 Aligned_cols=27 Identities=26% Similarity=0.618 Sum_probs=20.6
Q ss_pred cCCCCcccc--C--C--eeeecCCceecCCccccC
Q 021573 95 PCPSNGECH--Q--G--KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~--~--g--~v~C~~Gyvl~~~~Cv~D 123 (310)
||--+|.|. + + .-.|.+||. +..|+.|
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~--G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS--GDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE--TTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc--CCcCCcc
Confidence 788889997 3 2 249999994 7888765
No 11
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=49.43 E-value=5.9 Score=29.17 Aligned_cols=14 Identities=36% Similarity=0.835 Sum_probs=11.2
Q ss_pred eecCCceecCC-ccc
Q 021573 108 ECFHGYRKHGK-LCV 121 (310)
Q Consensus 108 ~C~~Gyvl~~~-~Cv 121 (310)
.|.+||.+.+. +|+
T Consensus 56 ~C~~Gy~~~~~~~C~ 70 (71)
T 2kl7_A 56 PCPPGYEPDDQDSCV 70 (71)
T ss_dssp CSCTTEEEECCCCSC
T ss_pred CCCCCeeeCCCCccc
Confidence 58899998875 786
No 12
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=48.98 E-value=5.9 Score=27.72 Aligned_cols=24 Identities=29% Similarity=0.733 Sum_probs=19.0
Q ss_pred ccccCCeeeecCCceecC-CccccCc
Q 021573 100 GECHQGKLECFHGYRKHG-KLCVEDG 124 (310)
Q Consensus 100 A~C~~g~v~C~~Gyvl~~-~~Cv~D~ 124 (310)
..|.+| -.|.+||++.+ ..||+-.
T Consensus 30 ~~C~~G-C~C~~G~v~~~~g~CV~~~ 54 (56)
T 1ccv_A 30 MQCRIG-CQCQEGFLRNGEGACVLPE 54 (56)
T ss_dssp SSCEEE-EEECTTCEEETTTEEECGG
T ss_pred CcCCCC-CcCCCCeeECCCCcccChh
Confidence 357665 79999999998 7998743
No 13
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=47.70 E-value=11 Score=30.12 Aligned_cols=49 Identities=24% Similarity=0.447 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCc--cCCC-----Ccc--ccC----C-e--eeecCCceecC---CccccCc
Q 021573 72 TSKPFCDSNLLLDSPQSPTDSCE--PCPS-----NGE--CHQ----G-K--LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 72 ~~~~FCDS~~~~~~~~~~~p~Ce--PCP~-----nA~--C~~----g-~--v~C~~Gyvl~~---~~Cv~D~ 124 (310)
+..-.|..+. .++ . .|.|+ .||. ||. |.+ | . ++|++||.+.+ -+|..||
T Consensus 44 ~~~~~C~~~G-~Ws--~-~p~C~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G 111 (133)
T 2a55_A 44 TQTLTCNSDG-EWV--Y-NTFCIYKRCRHPGELRNGQVEIKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQD 111 (133)
T ss_dssp CCCCEECSSS-SEE--C-CCCSEECBCCCCCCCTTBCCCCCSTTBSSCBCCCCBCTTCBCCSCSCCBCCCCS
T ss_pred CCEEEECCCC-eEC--C-CCcCccCCCcCCCccCCceEEcCCCCcCCCEEEEEcCCCCEEcCCCeeEecCCC
Confidence 4556676642 122 2 78997 5864 453 421 2 2 48999999988 7788877
No 14
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=47.66 E-value=11 Score=28.49 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=18.1
Q ss_pred hhhhhhhccCChHHHHHHHHHH
Q 021573 169 GHELMKIFELDNPVYLYTKKRT 190 (310)
Q Consensus 169 ~~~~~~~~~ls~~ef~~l~~~A 190 (310)
+..|.++|||+++|++++.++|
T Consensus 38 K~~FL~sKGLt~eEI~~Al~ra 59 (70)
T 2w84_A 38 RRAFLKKKGLTDEEIDMAFQQS 59 (70)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHc
Confidence 3455778999999999998886
No 15
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=46.42 E-value=7.7 Score=36.38 Aligned_cols=35 Identities=29% Similarity=0.849 Sum_probs=27.9
Q ss_pred CCCc----cCCCCccccC--C--eeeecCCceecCCccccCch
Q 021573 91 DSCE----PCPSNGECHQ--G--KLECFHGYRKHGKLCVEDGD 125 (310)
Q Consensus 91 p~Ce----PCP~nA~C~~--g--~v~C~~Gyvl~~~~Cv~D~e 125 (310)
+.|. +|-+||.|.+ | ...|.+||.-.+..|...++
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d~ 48 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGS 48 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEETTC
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCCC
Confidence 5564 8999999997 3 36999999999999987554
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=46.11 E-value=11 Score=30.07 Aligned_cols=27 Identities=22% Similarity=0.619 Sum_probs=22.6
Q ss_pred cCCCCccccCC-eeeecCCceec-------CCccc
Q 021573 95 PCPSNGECHQG-KLECFHGYRKH-------GKLCV 121 (310)
Q Consensus 95 PCP~nA~C~~g-~v~C~~Gyvl~-------~~~Cv 121 (310)
||+.||.|.+. .-.|.+||... +..|+
T Consensus 8 ~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~ 42 (143)
T 2bou_A 8 WCPQDSSCVNATACRCNPGFSSFSEIITTPMETCD 42 (143)
T ss_dssp TCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCE
T ss_pred cCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCC
Confidence 89999999997 46999999974 36775
No 17
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=45.16 E-value=11 Score=27.77 Aligned_cols=26 Identities=38% Similarity=0.844 Sum_probs=21.1
Q ss_pred cCCCCccccCC--e--eeecCCceecCCccc
Q 021573 95 PCPSNGECHQG--K--LECFHGYRKHGKLCV 121 (310)
Q Consensus 95 PCP~nA~C~~g--~--v~C~~Gyvl~~~~Cv 121 (310)
||. ||.|.+. . -.|.+||.+.+..|+
T Consensus 13 ~C~-~g~C~n~~g~y~C~C~~Gy~~~g~~C~ 42 (82)
T 1emn_A 13 VCK-HGQCINTDGSYRCECPFGYILAGNECV 42 (82)
T ss_dssp SCS-SSEECCCSSCCCEECCTTEEEETTEEE
T ss_pred CcC-CCEEEecCCCEEEECCCCeECCCCccC
Confidence 674 7999974 2 499999999888885
No 18
>1acw_A Natural scorpion peptide P01; scorpion toxin, potassium channel, neurotoxin, toxin; NMR {Androctonus mauretanicus mauretanicus} SCOP: g.3.7.2 PDB: 1wm7_A
Probab=44.95 E-value=2.2 Score=27.18 Aligned_cols=20 Identities=40% Similarity=0.963 Sum_probs=13.5
Q ss_pred CCccCCCC-------ccccCCeeeecC
Q 021573 92 SCEPCPSN-------GECHQGKLECFH 111 (310)
Q Consensus 92 ~CePCP~n-------A~C~~g~v~C~~ 111 (310)
.|+-||.| +.|.++...|++
T Consensus 2 ~CedcP~HC~~k~a~~~C~n~~C~C~~ 28 (29)
T 1acw_A 2 SCEDCPEHCSTQKAQAKCDNDKCVCEP 28 (29)
T ss_dssp CSSHHHHHHHTTTCEEEEETTEEEEEC
T ss_pred ccccchhhhhcccccccccCCeeecCC
Confidence 58889876 556666666653
No 19
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=44.35 E-value=7.6 Score=27.54 Aligned_cols=17 Identities=24% Similarity=0.716 Sum_probs=13.8
Q ss_pred eeecCCceecC---CccccCc
Q 021573 107 LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~ 124 (310)
++|++||.|.| -+|. |+
T Consensus 37 f~C~~Gy~L~G~~~~~C~-~g 56 (68)
T 1srz_A 37 FRCDPDFHLVGSSRSVCS-QG 56 (68)
T ss_dssp EEECTTEEECSCCEEEEE-TT
T ss_pred EECCCCCEEeCCCcCEEC-CC
Confidence 59999999999 4576 55
No 20
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.64 E-value=9.2 Score=27.42 Aligned_cols=18 Identities=33% Similarity=0.497 Sum_probs=14.7
Q ss_pred eeecCCceecC---CccccCc
Q 021573 107 LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~ 124 (310)
++|++||.|.+ -+|..|+
T Consensus 34 y~C~~Gy~L~G~~~~~C~~~g 54 (74)
T 2yra_A 34 YQCDPGYDIVGSDTLTCQWDL 54 (74)
T ss_dssp EEECTTEEEESCSEEEBCTTS
T ss_pred EECCCCCEECCCCceEECCCC
Confidence 59999999998 5577665
No 21
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.84 E-value=9.4 Score=27.36 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=14.8
Q ss_pred eeecCCceecC---CccccCc
Q 021573 107 LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~ 124 (310)
++|++||.|.+ .+|..|+
T Consensus 38 f~C~~Gy~L~G~~~~~C~~~g 58 (73)
T 2ehf_A 38 FECPAAFELVGERVITCQQNN 58 (73)
T ss_dssp EECCSSCCBCSCSEEEBCSSS
T ss_pred EEcCCCCEEeCCCeEEECCCC
Confidence 59999999998 5677665
No 22
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=41.75 E-value=12 Score=26.97 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=16.8
Q ss_pred hhhhhhccCChHHHHHHHHHH
Q 021573 170 HELMKIFELDNPVYLYTKKRT 190 (310)
Q Consensus 170 ~~~~~~~~ls~~ef~~l~~~A 190 (310)
..|.++|||+++|++++.+++
T Consensus 34 ~~FL~sKGLt~~EI~~Al~rs 54 (54)
T 3ff5_A 34 RAFLKKKGLTDEEIDLAFQQS 54 (54)
T ss_dssp HHHHHHTTCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHHHHHHHcC
Confidence 345678999999999988763
No 23
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=41.59 E-value=11 Score=34.63 Aligned_cols=30 Identities=27% Similarity=0.644 Sum_probs=22.0
Q ss_pred cCCCCccccCC--------e--eeecCCceecCC---------ccccCc
Q 021573 95 PCPSNGECHQG--------K--LECFHGYRKHGK---------LCVEDG 124 (310)
Q Consensus 95 PCP~nA~C~~g--------~--v~C~~Gyvl~~~---------~Cv~D~ 124 (310)
++|.||.|... . +.|++||.+.+. +|..|+
T Consensus 286 ~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g 334 (361)
T 4aqb_A 286 QPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDG 334 (361)
T ss_dssp CCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTS
T ss_pred CCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCC
Confidence 56789988521 2 589999999873 477776
No 24
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=41.56 E-value=10 Score=23.95 Aligned_cols=26 Identities=35% Similarity=0.888 Sum_probs=19.6
Q ss_pred ccCCCCccccCC--e--eeecCCceecCCccc
Q 021573 94 EPCPSNGECHQG--K--LECFHGYRKHGKLCV 121 (310)
Q Consensus 94 ePCP~nA~C~~g--~--v~C~~Gyvl~~~~Cv 121 (310)
.||..+|.|.+. . -.|.+||. +..|+
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~--G~~Ce 38 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFE--GKNCE 38 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCC--STTSC
T ss_pred CCCCCCCEeEcCCCceEeECCCCCc--CCccC
Confidence 389999999873 3 38999995 66665
No 25
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=39.73 E-value=73 Score=24.14 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=22.1
Q ss_pred HHHHHHHHHhHHHHHHHHhhccCCchhhhhccchhhh
Q 021573 255 VHRRRYFAIRVEELYHQVYNPFFPPLSRSMVSSFLIY 291 (310)
Q Consensus 255 i~~rra~~aRv~eLv~~v~drL~~~a~~~~~~~~~~~ 291 (310)
|+.||-.++=.+|--+..-+.-+|+.+++..+-|.-|
T Consensus 38 i~DrrE~~kFEkE~~~~~w~~~~NPlyk~~ttt~~nP 74 (79)
T 2knc_B 38 IHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNI 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCHHHHCSCCSCCC
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCCccCCccCccCC
Confidence 4444444444555555555666777888877776544
No 26
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=37.08 E-value=13 Score=26.18 Aligned_cols=27 Identities=33% Similarity=0.819 Sum_probs=20.4
Q ss_pred cCCCCccccC-------C--eeeecCCceecCCccccC
Q 021573 95 PCPSNGECHQ-------G--KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~~-------g--~v~C~~Gyvl~~~~Cv~D 123 (310)
||--+|.|.+ + .-.|.+||. +..|+.|
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~--G~~Ce~~ 48 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFT--GARCTEN 48 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEE--STTSCEE
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCc--CCccCcC
Confidence 6877899974 2 249999995 7888754
No 27
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=34.39 E-value=18 Score=34.94 Aligned_cols=29 Identities=38% Similarity=0.991 Sum_probs=23.1
Q ss_pred CCccCCCCccccC--CeeeecCCceecCCcccc
Q 021573 92 SCEPCPSNGECHQ--GKLECFHGYRKHGKLCVE 122 (310)
Q Consensus 92 ~CePCP~nA~C~~--g~v~C~~Gyvl~~~~Cv~ 122 (310)
.|.||-.||.|.+ +.-.|.+||. +..|+.
T Consensus 201 ~C~~C~~~G~C~~~~g~C~C~~G~~--G~~Ce~ 231 (423)
T 2gy5_A 201 LCTACMNNGVCHEDTGECICPPGFM--GRTCEK 231 (423)
T ss_dssp ECCCCCTTCEECTTTCCEECCTTEE--STTSCE
T ss_pred CCCCCCCCCEEECCCCcEeCCCCcc--CCCccc
Confidence 3558999999998 4569999995 777765
No 28
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=32.77 E-value=28 Score=23.71 Aligned_cols=27 Identities=30% Similarity=0.765 Sum_probs=20.5
Q ss_pred cCCCCcccc--CC--e--eeecCCceecCCccccC
Q 021573 95 PCPSNGECH--QG--K--LECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~--~g--~--v~C~~Gyvl~~~~Cv~D 123 (310)
||-.+|.|. ++ . -.|.+|| .+..|+.+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~--~G~~Ce~~ 45 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGY--SGDRCQTR 45 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTC--CSSSSCCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCC--cCCcCCcc
Confidence 687789998 42 2 4999999 47888764
No 29
>1hvw_A Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine knot, beta-hairpin; NMR {Synthetic} SCOP: g.3.6.2
Probab=31.07 E-value=25 Score=21.85 Aligned_cols=13 Identities=38% Similarity=1.022 Sum_probs=11.8
Q ss_pred ccCCCCccccCCe
Q 021573 94 EPCPSNGECHQGK 106 (310)
Q Consensus 94 ePCP~nA~C~~g~ 106 (310)
+|||.+.+|-.|.
T Consensus 6 q~Cp~~e~CCSGs 18 (26)
T 1hvw_A 6 QPCPYNENCCSQS 18 (26)
T ss_dssp SBCSSTTSBSSCC
T ss_pred CcCCCCccccccc
Confidence 5999999999996
No 30
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=30.00 E-value=20 Score=28.47 Aligned_cols=27 Identities=37% Similarity=0.993 Sum_probs=20.5
Q ss_pred cCCCCccccCC----eeeecCCceecCCccccC
Q 021573 95 PCPSNGECHQG----KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~~g----~v~C~~Gyvl~~~~Cv~D 123 (310)
||..||.|.+. .-.|.+||. +..|+.|
T Consensus 14 ~C~~~g~C~~~~g~~~C~C~~Gy~--G~~C~~~ 44 (135)
T 2vj3_A 14 PCEHAGKCINTLGSFECQCLQGYT--GPRCEID 44 (135)
T ss_dssp SSSTTCEEEECSSSEEEECCTTEE--STTSCEE
T ss_pred CCCCCCEeECCCCCEEEECCCCCc--CCccccc
Confidence 78899999875 248999996 6677644
No 31
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=29.90 E-value=30 Score=31.61 Aligned_cols=50 Identities=22% Similarity=0.571 Sum_probs=29.9
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCcc------CCC----Cc---cc-----cCCe--eeecCCceecC---CccccCc
Q 021573 72 TSKPFCDS----NLLLDSPQSPTDSCEP------CPS----NG---EC-----HQGK--LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 72 ~~~~FCDS----~~~~~~~~~~~p~CeP------CP~----nA---~C-----~~g~--v~C~~Gyvl~~---~~Cv~D~ 124 (310)
.....|.+ +. .=....|.|+. ||. ++ .| ++.. ++|++||.+.| -+|..||
T Consensus 41 ~~~~~C~~~~~~~g---~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g 117 (376)
T 2aty_A 41 EKSLLCITKDKVDG---TWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANN 117 (376)
T ss_pred CCceEEeccCCCCC---eECCCCCccccccCccEeCCCcCCCCeEecCCCCccCCCEEEEECCCCCEECCCcCeEECCCC
Confidence 55677872 21 11235689985 874 22 23 2223 59999999988 4565554
No 32
>2zjs_E Preprotein translocase SECE subunit; translocon, SEC, protein-conducting-channel, membrane, prote transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_E
Probab=29.32 E-value=62 Score=22.99 Aligned_cols=30 Identities=7% Similarity=0.164 Sum_probs=20.6
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 021573 36 QSLFPSKQDLLRLITVVAIASSVALTCNYL 65 (310)
Q Consensus 36 ~~lfp~~~~~~rll~vl~ia~~~a~~c~~L 65 (310)
.=-.|+|+|..+.-.+.++++++..+...+
T Consensus 18 KV~WPtr~e~~~~t~vViv~v~i~~~~~~~ 47 (60)
T 2zjs_E 18 RVTWPTREQVVEGTQAILLFTLAFMVILGL 47 (60)
T ss_dssp CCCCSCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999887777766655444333
No 33
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=28.90 E-value=34 Score=25.72 Aligned_cols=28 Identities=36% Similarity=0.787 Sum_probs=21.8
Q ss_pred cCCCCccccC----C--eeeecCCceecCCccccCc
Q 021573 95 PCPSNGECHQ----G--KLECFHGYRKHGKLCVEDG 124 (310)
Q Consensus 95 PCP~nA~C~~----g--~v~C~~Gyvl~~~~Cv~D~ 124 (310)
||-.+|.|.+ + .-.|.+|| .+..|+.|-
T Consensus 55 pC~ngg~C~~~~~~~~~~C~C~~G~--~G~~Ce~~i 88 (91)
T 1tpg_A 55 RCFNGGTCQQALYFSDFVCQCPEGF--AGKSCEIDT 88 (91)
T ss_dssp CSCTTCEEEEESSSSCEEEECCTTC--BSSSCCBCS
T ss_pred CCCCCCEeecCCCCCCeEeECCCCC--cCCcCCcCC
Confidence 7888899984 3 24999999 488998663
No 34
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=28.89 E-value=21 Score=28.21 Aligned_cols=31 Identities=32% Similarity=0.973 Sum_probs=22.4
Q ss_pred CCCc--cCCCCcccc-------C---C-eeeecCCceecCCccccC
Q 021573 91 DSCE--PCPSNGECH-------Q---G-KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 91 p~Ce--PCP~nA~C~-------~---g-~v~C~~Gyvl~~~~Cv~D 123 (310)
+.|. ||..+|.|. + + .-.|.+||. +..|+.|
T Consensus 53 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~--G~~C~~~ 96 (143)
T 4d90_A 53 GPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN--GIHCQHN 96 (143)
T ss_dssp CTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE--STTSCEE
T ss_pred CcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc--CCCcccC
Confidence 4454 588999998 2 2 359999994 7888744
No 35
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=27.56 E-value=29 Score=30.77 Aligned_cols=26 Identities=35% Similarity=0.864 Sum_probs=20.4
Q ss_pred cCCCC--ccccCCeeeecCCceecCCcccc
Q 021573 95 PCPSN--GECHQGKLECFHGYRKHGKLCVE 122 (310)
Q Consensus 95 PCP~n--A~C~~g~v~C~~Gyvl~~~~Cv~ 122 (310)
+|-.| |.|..|.-.|.+||. +..|+.
T Consensus 187 ~C~~~~~G~C~~g~C~C~~G~~--G~~C~~ 214 (217)
T 2p28_B 187 VCGGPGRGLCFCGKCRCHPGFE--GSACQH 214 (217)
T ss_dssp ETTCTTTEEEETTEEEECTTEE--STTSCE
T ss_pred CCCCCCCcEEeCCeeECCCCCc--cCCcCC
Confidence 46667 999999889999994 566653
No 36
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=25.99 E-value=41 Score=29.74 Aligned_cols=31 Identities=29% Similarity=0.807 Sum_probs=24.7
Q ss_pred CCC-ccCCCCccccCCe-eeecCCceecCCccccC
Q 021573 91 DSC-EPCPSNGECHQGK-LECFHGYRKHGKLCVED 123 (310)
Q Consensus 91 p~C-ePCP~nA~C~~g~-v~C~~Gyvl~~~~Cv~D 123 (310)
+.| .+|=-+|.|..-+ .+|.+||. |+.|+..
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~--G~~C~~~ 181 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFH--GPHCEGT 181 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCB--TTTTCBC
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCC--CCCCcCC
Confidence 455 4788899999864 69999997 7888764
No 37
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=25.57 E-value=24 Score=27.47 Aligned_cols=18 Identities=17% Similarity=0.589 Sum_probs=14.9
Q ss_pred eeecCCceecC---CccccCc
Q 021573 107 LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~ 124 (310)
++|++||.+.+ -+|..|+
T Consensus 97 ~~C~~Gy~l~G~~~~~C~~~G 117 (130)
T 1ly2_A 97 FACKTNFSMNGNKSVWCQANN 117 (130)
T ss_dssp EEECTTEEEESCSEEEECTTS
T ss_pred EEeCCCCEEeCCCceEECCCC
Confidence 49999999988 5677776
No 38
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=25.16 E-value=33 Score=30.69 Aligned_cols=27 Identities=37% Similarity=0.892 Sum_probs=19.9
Q ss_pred cCCCCccccCC----eeeecCCceecCCccccC
Q 021573 95 PCPSNGECHQG----KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~~g----~v~C~~Gyvl~~~~Cv~D 123 (310)
||..+|.|.+. ...|.+||. ++.|+.|
T Consensus 12 pC~~~g~C~~~~~~~~C~C~~g~~--g~~C~~~ 42 (317)
T 3h5c_B 12 PCLHNGSCQDSIWGYTCTCSPGYE--GSNCELA 42 (317)
T ss_dssp CCTTTCCCCCCSSSCCCCCSSSCC--SSSSCCC
T ss_pred CCCCCCEeECCCCCeEEECCCCCc--CCccccC
Confidence 68888899874 248899996 6677644
No 39
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=24.82 E-value=42 Score=34.82 Aligned_cols=26 Identities=38% Similarity=0.888 Sum_probs=22.0
Q ss_pred cCCCCccccCCeeeecCCceecCCcccc
Q 021573 95 PCPSNGECHQGKLECFHGYRKHGKLCVE 122 (310)
Q Consensus 95 PCP~nA~C~~g~v~C~~Gyvl~~~~Cv~ 122 (310)
+|-.||.|..|.-.|.+||. |+.|+.
T Consensus 567 ~Cs~~G~C~~g~C~C~~Gy~--G~~Ce~ 592 (687)
T 3k6s_B 567 ECSGRGRCRCNVCECHSGYQ--LPLCQE 592 (687)
T ss_dssp BTSSSCCBCSSCBCCSTTCC--TTTTCC
T ss_pred CCCCCCcCCCCEEECCCCCc--CCCCCC
Confidence 67789999999999999996 667765
No 40
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=24.79 E-value=41 Score=33.58 Aligned_cols=43 Identities=21% Similarity=0.409 Sum_probs=25.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcc----CCCCcc-----------ccCCe--eeecCCceecC
Q 021573 72 TSKPFCDSNLLLDSPQSPTDSCEP----CPSNGE-----------CHQGK--LECFHGYRKHG 117 (310)
Q Consensus 72 ~~~~FCDS~~~~~~~~~~~p~CeP----CP~nA~-----------C~~g~--v~C~~Gyvl~~ 117 (310)
+..-.|..+. .+ ....|.|++ ||+-.. =++.. ++|++||.+.+
T Consensus 115 ~~~~~C~~~g-~W--s~~~p~C~~~~~~C~~p~~~~~~~~~~~~~~~g~~v~~~C~~gy~l~G 174 (741)
T 3hrz_D 115 SANRTCQVNG-RW--SGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRG 174 (741)
T ss_dssp CSEEEBCTTS-CB--SSCCCEEECSCSSSCCCCCCTTEEEECCCCSTTCEEEEEECTTSEEES
T ss_pred CcceEecCCC-eE--ccCcCeeeccCCcCCCCCCCCCCeeeCCccccCCEEEEEcCCCCEEcC
Confidence 4556785542 11 235788975 875321 11223 59999999988
No 41
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=24.45 E-value=17 Score=30.31 Aligned_cols=28 Identities=29% Similarity=0.700 Sum_probs=22.2
Q ss_pred cCCCCccccCCe---------eeecCCceecCCcccc
Q 021573 95 PCPSNGECHQGK---------LECFHGYRKHGKLCVE 122 (310)
Q Consensus 95 PCP~nA~C~~g~---------v~C~~Gyvl~~~~Cv~ 122 (310)
||..+|.|.+.. -.|.+||...+..|+.
T Consensus 55 ~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~ 91 (186)
T 1z1y_A 55 ACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVL 91 (186)
T ss_dssp EEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEE
T ss_pred CCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCC
Confidence 688999998532 4999999998877763
No 42
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.23 E-value=61 Score=22.37 Aligned_cols=12 Identities=8% Similarity=0.307 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 021573 242 CSLLVGCLLLLW 253 (310)
Q Consensus 242 ~~l~~g~~~ir~ 253 (310)
+++++|+.++.|
T Consensus 23 l~vi~~l~~~~~ 34 (44)
T 2jwa_A 23 LVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 344444443333
No 43
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=24.10 E-value=44 Score=32.47 Aligned_cols=46 Identities=22% Similarity=0.473 Sum_probs=26.5
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCc---cCCC-----Ccc--c-------cCCe--eeecCCceecC
Q 021573 72 TSKPFCDSNLL-LDSPQSPTDSCE---PCPS-----NGE--C-------HQGK--LECFHGYRKHG 117 (310)
Q Consensus 72 ~~~~FCDS~~~-~~~~~~~~p~Ce---PCP~-----nA~--C-------~~g~--v~C~~Gyvl~~ 117 (310)
.....|..+.- .+.=....|.|+ .||. ||. | ++.. ++|++||.+.+
T Consensus 170 ~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G 235 (551)
T 1ntl_A 170 EPSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKG 235 (551)
T ss_pred CcceEeeCCCCcCCEECCCCCcccCccccCCCCCCCCceEeCCCCCcccCCCEEEEECCCCCEEcC
Confidence 45567866400 001123568997 4876 442 2 2223 59999999987
No 44
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=24.04 E-value=24 Score=27.68 Aligned_cols=50 Identities=34% Similarity=0.638 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCc--cCC-----CCcc--ccC----C-e--eeecCCceecC---CccccCch
Q 021573 73 SKPFCDSNLLLDSPQSPTDSCE--PCP-----SNGE--CHQ----G-K--LECFHGYRKHG---KLCVEDGD 125 (310)
Q Consensus 73 ~~~FCDS~~~~~~~~~~~p~Ce--PCP-----~nA~--C~~----g-~--v~C~~Gyvl~~---~~Cv~D~e 125 (310)
..-.|..+. .+ ....|.|+ .|| .||. |.. | . ++|++||.+.+ -+|..||.
T Consensus 45 ~~~~C~~~g-~W--s~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~ 113 (128)
T 1gkn_A 45 FSITCLDNL-VW--SSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGN 113 (128)
T ss_dssp EEEEBCSSS-CB--CCCCSCCEECBCCCCCCCTTEEEEESSCCBTTCEEEEEECTTEECCSCSEEEEEECSS
T ss_pred CceEECCCC-cC--CCCCCeEcceECcCCCCCCCcEEEeccCCccCCEEEEEeCCCCEEccCCceEEcCCCC
Confidence 344576542 11 23468897 485 4554 422 3 2 49999999998 67877764
No 45
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=23.92 E-value=38 Score=31.45 Aligned_cols=26 Identities=31% Similarity=0.791 Sum_probs=14.3
Q ss_pred cCCCCccccCC-eeeecCCceecCCcccc
Q 021573 95 PCPSNGECHQG-KLECFHGYRKHGKLCVE 122 (310)
Q Consensus 95 PCP~nA~C~~g-~v~C~~Gyvl~~~~Cv~ 122 (310)
+|-.||.|.+. .-.|.+||. ++.|+.
T Consensus 154 ~C~~~G~C~~~~~C~C~~G~~--G~~C~~ 180 (324)
T 2ygq_A 154 GCRNGGFCNERRICECPDGFH--GPHCEK 180 (324)
T ss_dssp CCCSSCEECTTSCEECCTTEE--SSSSCE
T ss_pred CCCCCCEECCCCeEECCCCCc--CCCCCC
Confidence 56666666653 346666664 444443
No 46
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=23.87 E-value=33 Score=23.93 Aligned_cols=23 Identities=26% Similarity=0.700 Sum_probs=17.6
Q ss_pred cccCCeeeecCC--ceec-CCccccCc
Q 021573 101 ECHQGKLECFHG--YRKH-GKLCVEDG 124 (310)
Q Consensus 101 ~C~~g~v~C~~G--yvl~-~~~Cv~D~ 124 (310)
.|.+| -.|.+| |++. +..||+-.
T Consensus 33 ~C~~G-C~C~~Gtv~v~~~~~~CV~~~ 58 (60)
T 1hx2_A 33 KCNQR-CGCISGTVLKSKDSSECVHPS 58 (60)
T ss_dssp CCCSE-EEECTTCEESSTTCSSEECTT
T ss_pred cCCCC-CCCCCCCeeEECCCCCEechh
Confidence 56555 689999 9998 78898743
No 47
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=23.80 E-value=37 Score=22.40 Aligned_cols=23 Identities=30% Similarity=0.681 Sum_probs=17.0
Q ss_pred ccccC--Ce--eeecCCceecC--Ccccc
Q 021573 100 GECHQ--GK--LECFHGYRKHG--KLCVE 122 (310)
Q Consensus 100 A~C~~--g~--v~C~~Gyvl~~--~~Cv~ 122 (310)
+.|.+ |. -.|.+||.+.. .+|+.
T Consensus 24 ~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 24 HLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 58986 43 48999999864 67764
No 48
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=23.30 E-value=29 Score=27.30 Aligned_cols=18 Identities=22% Similarity=0.551 Sum_probs=14.6
Q ss_pred eeecCCceecCC------ccccCc
Q 021573 107 LECFHGYRKHGK------LCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~~------~Cv~D~ 124 (310)
.+|++||.+.+. +|..|+
T Consensus 37 y~C~~Gy~l~g~~~~~~~~C~~~g 60 (125)
T 4ayi_A 37 YYCDEHFETPSGSYWDHIHCTQDG 60 (125)
T ss_dssp EEECTTEECTTSSSEEEEEEETTE
T ss_pred EEcCCCCEECCCCccCEEEeCCCc
Confidence 499999999884 577665
No 49
>1rh5_B Preprotein translocase SECE subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.28.1 PDB: 1rhz_B 2yxq_B 2yxr_B 3dkn_B
Probab=22.83 E-value=1.2e+02 Score=22.94 Aligned_cols=15 Identities=33% Similarity=0.645 Sum_probs=11.6
Q ss_pred CChhhHHHHHHHHHH
Q 021573 40 PSKQDLLRLITVVAI 54 (310)
Q Consensus 40 p~~~~~~rll~vl~i 54 (310)
|+++||.+...+.++
T Consensus 29 Pdr~EF~~iak~~~i 43 (74)
T 1rh5_B 29 PTKDEYLAVAKVTAL 43 (74)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999998765443
No 50
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=22.81 E-value=25 Score=34.37 Aligned_cols=31 Identities=29% Similarity=0.634 Sum_probs=25.6
Q ss_pred cCCCCccccCCeeeecCCceecCCccccCch
Q 021573 95 PCPSNGECHQGKLECFHGYRKHGKLCVEDGD 125 (310)
Q Consensus 95 PCP~nA~C~~g~v~C~~Gyvl~~~~Cv~D~e 125 (310)
-|=-||.|..|...|++||.-....|.++..
T Consensus 197 ~CsGhG~C~~g~C~Cd~G~~g~d~~C~~~~~ 227 (387)
T 2ddu_A 197 YCSGHGDCISGVCFCDLGYTAAQGTCVSNTP 227 (387)
T ss_dssp GGGGSEEEETTEEEECTTEEEETTEEEESSC
T ss_pred ccCCCceecCCeEEecCCcccCCCccccccc
Confidence 3556999999999999999987778887663
No 51
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=22.69 E-value=26 Score=22.49 Aligned_cols=18 Identities=39% Similarity=1.089 Sum_probs=15.0
Q ss_pred CCc-cCCCCccccCCeeee
Q 021573 92 SCE-PCPSNGECHQGKLEC 109 (310)
Q Consensus 92 ~Ce-PCP~nA~C~~g~v~C 109 (310)
+|- ||..+|.|.+|+-.|
T Consensus 12 ~C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 12 DCSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHHSSSCCCEETTEESC
T ss_pred HHHhhhccCCcccCCCcee
Confidence 465 899999999998766
No 52
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=22.40 E-value=27 Score=27.62 Aligned_cols=19 Identities=32% Similarity=0.676 Sum_probs=15.9
Q ss_pred eeecCCceecC---CccccCch
Q 021573 107 LECFHGYRKHG---KLCVEDGD 125 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~e 125 (310)
++|++||.+.+ -+|..|+.
T Consensus 32 y~C~~Gy~l~G~~~~~C~~~G~ 53 (136)
T 1gkg_A 32 YSCTTGHRLIGHSSAECILSGN 53 (136)
T ss_dssp EECCSSEEECSCSEEEEEECSS
T ss_pred EECCCCCeEcCCCceEEeCCCc
Confidence 59999999998 66888774
No 53
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=22.36 E-value=33 Score=28.02 Aligned_cols=27 Identities=37% Similarity=0.836 Sum_probs=21.5
Q ss_pred cCCCCccccCC----eeeecCCceecCCccccC
Q 021573 95 PCPSNGECHQG----KLECFHGYRKHGKLCVED 123 (310)
Q Consensus 95 PCP~nA~C~~g----~v~C~~Gyvl~~~~Cv~D 123 (310)
||..+|.|.+. .-.|.+||. +..|+.+
T Consensus 55 pC~n~g~C~~~~~~y~C~C~~G~~--G~~C~~~ 85 (146)
T 1x7a_L 55 PCLNGGLCKDDINSYECWCQVGFE--GKNCELD 85 (146)
T ss_dssp SSCTTCEEEECSSCEEEECCSSEE--STTTCEE
T ss_pred CCCCCCEeECCCCCEEEecCCCCc--CCcCCCC
Confidence 78889999874 249999997 7788765
No 54
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=22.18 E-value=33 Score=27.91 Aligned_cols=26 Identities=23% Similarity=0.602 Sum_probs=20.9
Q ss_pred cCCCCccccCC--e--eeecCCceec--CCccc
Q 021573 95 PCPSNGECHQG--K--LECFHGYRKH--GKLCV 121 (310)
Q Consensus 95 PCP~nA~C~~g--~--v~C~~Gyvl~--~~~Cv 121 (310)
||. ||.|.+. . -.|.+||.+. +..|+
T Consensus 11 ~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~ 42 (162)
T 1uzk_A 11 TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV 42 (162)
T ss_dssp SSB-TSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred CCC-CCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence 685 8999873 3 4899999986 67887
No 55
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=22.08 E-value=34 Score=35.23 Aligned_cols=32 Identities=41% Similarity=0.829 Sum_probs=25.5
Q ss_pred cCCCCccccC------C--eeeecCCceecCCccccCchh
Q 021573 95 PCPSNGECHQ------G--KLECFHGYRKHGKLCVEDGDI 126 (310)
Q Consensus 95 PCP~nA~C~~------g--~v~C~~Gyvl~~~~Cv~D~ek 126 (310)
||..+|.|.+ | ...|.+||.-.+..|+.+.++
T Consensus 111 pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~Di 150 (634)
T 1yo8_A 111 NCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDL 150 (634)
T ss_dssp CCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTS
T ss_pred ccccCccccccccccccceeeeccCCccccCcccccccCc
Confidence 8999999975 3 359999999888899876544
No 56
>1axh_A Atracotoxin-HVI, ACTX-HVI; neurotoxin, insecticidal toxin, cystine knot, funnel-WEB; NMR {Hadronyche versuta} SCOP: g.3.6.2
Probab=22.06 E-value=30 Score=23.08 Aligned_cols=16 Identities=38% Similarity=0.821 Sum_probs=12.9
Q ss_pred CCCccCCCCccccCCe
Q 021573 91 DSCEPCPSNGECHQGK 106 (310)
Q Consensus 91 p~CePCP~nA~C~~g~ 106 (310)
|+=+|||.|-.|-+|.
T Consensus 6 psgQPCpyne~CCs~s 21 (37)
T 1axh_A 6 PSGQPCPYNENCCSQS 21 (37)
T ss_dssp CTTSBCSSGGGBSSSC
T ss_pred cCCCcCCCcccccccc
Confidence 4446999999999884
No 57
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=21.53 E-value=43 Score=34.74 Aligned_cols=39 Identities=26% Similarity=0.715 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCc-----cCCCCccccCCeeeecCCceecCCccc
Q 021573 72 TSKPFCDSNLLLDSPQSPTDSCE-----PCPSNGECHQGKLECFHGYRKHGKLCV 121 (310)
Q Consensus 72 ~~~~FCDS~~~~~~~~~~~p~Ce-----PCP~nA~C~~g~v~C~~Gyvl~~~~Cv 121 (310)
...++|+.+ ...|. +|-.||.|.+|.-.|.+|| .|..|+
T Consensus 516 y~G~~Ce~~---------~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy--~G~~Ce 559 (690)
T 3fcs_B 516 ITGKYCECD---------DFSCVRYKGEMCSGHGQCSCGDCLCDSDW--TGYYCN 559 (690)
T ss_dssp CBSTTSCBC---------SSCCCBSSSSBGGGSEEEETTEEEECTTE--ESSSSC
T ss_pred eeCCCcCcc---------cCcCcCCCCCCCCCCCEecCCeeECcCCC--cCCCCc
No 58
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=20.26 E-value=28 Score=26.96 Aligned_cols=18 Identities=33% Similarity=0.955 Sum_probs=14.8
Q ss_pred eeecCCceecC---CccccCc
Q 021573 107 LECFHGYRKHG---KLCVEDG 124 (310)
Q Consensus 107 v~C~~Gyvl~~---~~Cv~D~ 124 (310)
++|++||.+.+ -+|..|+
T Consensus 28 ~~C~~Gy~l~G~~~~~C~~~g 48 (125)
T 1h03_P 28 FSCNTGYKLFGSTSSFCLISG 48 (125)
T ss_dssp EEECTTEEEESCSEEEEEEET
T ss_pred EECCCCCeECCCCeeEEcCCC
Confidence 59999999998 5677766
Done!